Query 001869
Match_columns 1002
No_of_seqs 657 out of 4707
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 02:28:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001869.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001869hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aw0_A HPDK1, 3-phosphoinositi 100.0 3.7E-59 1.3E-63 515.2 25.7 278 668-974 31-310 (311)
2 3ubd_A Ribosomal protein S6 ki 100.0 3E-57 1E-61 499.9 21.4 280 666-977 21-304 (304)
3 4b9d_A Serine/threonine-protei 100.0 5.9E-56 2E-60 497.6 24.2 260 668-960 23-282 (350)
4 4fih_A Serine/threonine-protei 100.0 2.8E-55 9.6E-60 491.4 24.9 255 669-960 74-329 (346)
5 3hyh_A Carbon catabolite-derep 100.0 6.4E-55 2.2E-59 474.9 25.1 261 661-960 7-268 (275)
6 4fie_A Serine/threonine-protei 100.0 5.4E-54 1.8E-58 492.6 28.0 255 669-960 151-406 (423)
7 3fpq_A Serine/threonine-protei 100.0 9.4E-53 3.2E-57 461.8 27.1 253 671-960 28-288 (290)
8 3v5w_A G-protein coupled recep 100.0 7E-53 2.4E-57 503.7 27.9 287 663-982 183-477 (689)
9 4g3f_A NF-kappa-beta-inducing 100.0 9.8E-53 3.4E-57 469.5 22.1 259 667-961 56-329 (336)
10 4b99_A Mitogen-activated prote 100.0 2.7E-51 9.4E-56 471.0 27.5 264 669-963 54-353 (398)
11 4g31_A Eukaryotic translation 100.0 3.7E-51 1.3E-55 452.9 21.5 271 669-965 5-290 (299)
12 3omv_A RAF proto-oncogene seri 100.0 1.5E-49 5E-54 439.6 27.4 266 662-958 29-303 (307)
13 4f9c_A Cell division cycle 7-r 100.0 1.3E-49 4.4E-54 452.3 27.6 281 668-962 20-360 (361)
14 4asz_A BDNF/NT-3 growth factor 100.0 1.9E-49 6.5E-54 438.5 23.7 260 665-959 9-285 (299)
15 3uto_A Twitchin; kinase, muscl 100.0 3.3E-49 1.1E-53 475.5 27.2 263 668-966 156-422 (573)
16 4aoj_A High affinity nerve gro 100.0 9.2E-49 3.1E-53 439.0 27.4 257 665-954 37-312 (329)
17 4gt4_A Tyrosine-protein kinase 100.0 1.1E-48 3.6E-53 434.4 24.5 256 665-948 22-297 (308)
18 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.6E-48 9E-53 441.8 26.6 287 664-981 18-307 (353)
19 1o6l_A RAC-beta serine/threoni 100.0 1E-47 3.4E-52 434.2 30.5 284 666-980 2-286 (337)
20 4dc2_A Protein kinase C IOTA t 100.0 1.9E-47 6.3E-52 440.2 31.0 288 665-983 48-347 (396)
21 4ase_A Vascular endothelial gr 100.0 3.8E-48 1.3E-52 437.5 21.8 261 664-955 59-341 (353)
22 3a8x_A Protein kinase C IOTA t 100.0 1.1E-46 3.8E-51 427.3 33.0 286 665-981 5-302 (345)
23 2r5t_A Serine/threonine-protei 100.0 1.8E-47 6E-52 437.9 26.4 287 665-982 34-321 (373)
24 1fot_A TPK1 delta, CAMP-depend 100.0 3.1E-47 1.1E-51 426.8 27.5 281 666-980 3-284 (318)
25 3v8s_A RHO-associated protein 100.0 1.5E-47 5.1E-52 443.4 23.8 287 665-986 65-361 (410)
26 1xjd_A Protein kinase C, theta 100.0 2.5E-47 8.6E-52 432.1 25.0 280 666-980 14-295 (345)
27 1rdq_E PKA C-alpha, CAMP-depen 100.0 6.1E-47 2.1E-51 430.2 28.1 284 666-983 38-322 (350)
28 2i0e_A Protein kinase C-beta I 100.0 7.4E-47 2.5E-51 429.7 27.4 285 665-980 16-302 (353)
29 4aw2_A Serine/threonine-protei 100.0 3.7E-47 1.3E-51 443.4 25.3 290 665-987 70-369 (437)
30 4fr4_A YANK1, serine/threonine 100.0 3.4E-46 1.2E-50 428.2 29.0 285 661-980 7-297 (384)
31 2vd5_A DMPK protein; serine/th 100.0 8.6E-47 2.9E-51 437.3 22.6 285 665-980 57-351 (412)
32 3fe3_A MAP/microtubule affinit 100.0 2.7E-45 9.1E-50 413.0 30.1 261 665-962 11-272 (328)
33 4ejn_A RAC-alpha serine/threon 100.0 6.9E-46 2.3E-50 436.0 26.0 293 664-987 143-437 (446)
34 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.6E-45 5.6E-50 438.9 28.9 287 665-980 181-474 (543)
35 3a62_A Ribosomal protein S6 ki 100.0 3.4E-45 1.2E-49 412.2 28.8 286 665-981 13-303 (327)
36 2yab_A Death-associated protei 100.0 3.6E-45 1.2E-49 417.1 28.0 265 668-966 11-284 (361)
37 2acx_A G protein-coupled recep 100.0 3.1E-45 1.1E-49 437.4 27.6 285 665-979 180-469 (576)
38 3pfq_A PKC-B, PKC-beta, protei 100.0 5.7E-45 2E-49 447.8 28.1 285 665-980 337-623 (674)
39 3zgw_A Maternal embryonic leuc 100.0 8.2E-45 2.8E-49 411.7 24.7 257 668-960 9-266 (347)
40 3fxz_A Serine/threonine-protei 100.0 3.6E-44 1.2E-48 398.2 28.8 257 668-961 19-276 (297)
41 3soa_A Calcium/calmodulin-depe 100.0 8.7E-44 3E-48 416.3 29.0 259 668-960 10-273 (444)
42 2y0a_A Death-associated protei 100.0 1.4E-43 4.9E-48 398.7 28.7 265 668-966 10-283 (326)
43 2zv2_A Calcium/calmodulin-depe 100.0 4E-44 1.4E-48 397.6 23.5 263 663-959 7-297 (298)
44 1tki_A Titin; serine kinase, m 100.0 6.1E-44 2.1E-48 400.8 24.2 257 668-961 4-264 (321)
45 3gni_B Strad alpha; kinase fol 100.0 1.3E-43 4.6E-48 409.0 26.9 275 667-966 23-345 (389)
46 2bdw_A Hypothetical protein K1 100.0 1.3E-43 4.4E-48 404.9 26.5 258 668-960 28-290 (362)
47 3hmm_A TGF-beta receptor type- 100.0 3E-44 1E-48 399.0 20.2 247 669-947 3-287 (303)
48 3o0g_A Cell division protein k 100.0 4.5E-43 1.5E-47 387.9 28.0 259 669-961 2-289 (292)
49 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.2E-44 7.7E-49 406.4 17.1 257 667-960 7-264 (336)
50 3niz_A Rhodanese family protei 100.0 2.7E-43 9.3E-48 393.7 25.4 264 666-964 18-310 (311)
51 3oz6_A Mitogen-activated prote 100.0 4.4E-43 1.5E-47 404.5 27.4 281 668-964 8-338 (388)
52 3rp9_A Mitogen-activated prote 100.0 3.4E-43 1.2E-47 414.6 27.0 302 668-977 52-419 (458)
53 3c0i_A Peripheral plasma membr 100.0 1.4E-43 4.9E-48 402.9 22.7 266 666-963 21-295 (351)
54 3uc3_A Serine/threonine-protei 100.0 4.8E-43 1.6E-47 400.1 26.4 257 666-960 17-280 (361)
55 3tki_A Serine/threonine-protei 100.0 2.2E-43 7.4E-48 396.7 23.0 261 668-961 6-268 (323)
56 1kob_A Twitchin; kinase, intra 100.0 8.1E-43 2.8E-47 401.2 28.0 260 668-963 50-313 (387)
57 2eue_A Carbon catabolite derep 100.0 4.3E-43 1.5E-47 384.5 24.5 257 667-960 11-268 (275)
58 3kk8_A Calcium/calmodulin depe 100.0 1.7E-42 5.9E-47 381.2 29.3 265 668-967 5-274 (284)
59 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.7E-43 9.4E-48 396.9 22.4 264 666-964 31-328 (329)
60 3fdn_A Serine/threonine-protei 100.0 3.5E-43 1.2E-47 386.0 22.2 260 665-961 5-264 (279)
61 2a2a_A Death-associated protei 100.0 1.1E-42 3.7E-47 390.5 26.6 266 668-967 11-285 (321)
62 1vzo_A Ribosomal protein S6 ki 100.0 5.7E-43 2E-47 398.6 24.6 287 666-982 51-349 (355)
63 3g33_A Cell division protein k 100.0 1E-42 3.5E-47 388.1 26.1 263 666-961 6-303 (308)
64 2pmi_A Negative RE, cyclin-dep 100.0 4.6E-43 1.6E-47 392.9 23.1 265 668-966 4-305 (317)
65 3llt_A Serine/threonine kinase 100.0 8.3E-43 2.8E-47 397.8 25.6 256 665-959 31-360 (360)
66 2qr7_A Ribosomal protein S6 ki 100.0 2.3E-43 7.9E-48 399.5 20.8 261 668-970 21-291 (342)
67 2y94_A 5'-AMP-activated protei 100.0 3.9E-43 1.3E-47 413.6 23.1 260 665-960 12-272 (476)
68 1ob3_A PFPK5, cell division co 100.0 7E-43 2.4E-47 385.7 23.3 258 669-961 2-287 (288)
69 3ttj_A Mitogen-activated prote 100.0 5.9E-43 2E-47 412.3 23.6 255 668-960 61-361 (464)
70 4agu_A Cyclin-dependent kinase 100.0 1.5E-42 5.2E-47 387.0 25.3 265 668-966 2-296 (311)
71 2w4o_A Calcium/calmodulin-depe 100.0 2E-42 7E-47 393.1 26.3 258 667-963 51-314 (349)
72 2vgo_A Serine/threonine-protei 100.0 1.1E-42 3.7E-47 383.2 22.8 259 665-960 10-268 (284)
73 1nxk_A MAP kinase-activated pr 100.0 1E-42 3.5E-47 402.8 23.4 253 668-960 60-327 (400)
74 3lm5_A Serine/threonine-protei 100.0 2.2E-42 7.4E-47 389.2 25.3 266 669-967 28-300 (327)
75 2x4f_A Myosin light chain kina 100.0 8.3E-43 2.9E-47 399.7 22.2 261 670-966 88-354 (373)
76 1cm8_A Phosphorylated MAP kina 100.0 1.8E-42 6.3E-47 396.2 24.7 259 668-965 24-318 (367)
77 1u5q_A Serine/threonine protei 100.0 3.8E-42 1.3E-46 390.6 26.7 256 669-961 54-312 (348)
78 3n9x_A Phosphotransferase; mal 100.0 6.7E-42 2.3E-46 400.2 29.4 297 668-977 25-384 (432)
79 2ac3_A MAP kinase-interacting 100.0 3.3E-42 1.1E-46 385.2 25.4 268 668-964 11-305 (316)
80 2c30_A Serine/threonine-protei 100.0 6.1E-42 2.1E-46 384.5 27.3 256 670-962 46-302 (321)
81 3nyv_A Calmodulin-domain prote 100.0 7.4E-43 2.5E-47 414.6 20.3 263 666-963 23-290 (484)
82 3cok_A Serine/threonine-protei 100.0 1.4E-42 4.7E-47 380.9 20.7 260 668-961 10-269 (278)
83 3hko_A Calcium/calmodulin-depe 100.0 1.2E-42 4E-47 393.9 20.4 270 668-964 25-340 (345)
84 1phk_A Phosphorylase kinase; g 100.0 1.1E-41 3.7E-46 377.6 27.6 267 668-968 16-297 (298)
85 2owb_A Serine/threonine-protei 100.0 5.6E-42 1.9E-46 387.2 25.8 260 667-961 39-298 (335)
86 3f3z_A Calcium/calmodulin-depe 100.0 3.9E-42 1.3E-46 377.1 23.0 255 668-960 8-267 (277)
87 3mtl_A Cell division protein k 100.0 1.1E-42 3.8E-47 391.1 19.1 261 669-964 2-291 (324)
88 3is5_A Calcium-dependent prote 100.0 7.2E-42 2.4E-46 377.1 25.2 257 669-960 22-284 (285)
89 2xrw_A Mitogen-activated prote 100.0 4.9E-42 1.7E-46 393.4 24.5 259 668-964 24-328 (371)
90 2rku_A Serine/threonine-protei 100.0 8.4E-42 2.9E-46 378.0 25.6 260 667-961 13-272 (294)
91 3kn6_A Ribosomal protein S6 ki 100.0 2.5E-42 8.4E-47 388.5 21.6 253 670-961 9-277 (325)
92 3dls_A PAS domain-containing s 100.0 2.2E-42 7.4E-47 390.6 20.8 265 668-974 23-300 (335)
93 2h6d_A 5'-AMP-activated protei 100.0 8.1E-42 2.8E-46 374.2 23.8 260 665-960 7-267 (276)
94 3mwu_A Calmodulin-domain prote 100.0 4.8E-42 1.7E-46 407.8 23.6 258 668-961 21-283 (486)
95 3q5i_A Protein kinase; CDPK, m 100.0 9.4E-42 3.2E-46 407.1 25.9 259 668-961 35-308 (504)
96 2fst_X Mitogen-activated prote 100.0 6.8E-42 2.3E-46 391.3 23.1 259 668-965 28-322 (367)
97 2jam_A Calcium/calmodulin-depe 100.0 1.2E-41 4.2E-46 378.6 24.5 256 668-961 8-268 (304)
98 3eqc_A Dual specificity mitoge 100.0 4.9E-42 1.7E-46 391.5 21.7 265 665-966 29-336 (360)
99 2r3i_A Cell division protein k 100.0 1.4E-41 4.7E-46 376.9 24.7 263 668-963 2-292 (299)
100 1ua2_A CAK, cell division prot 100.0 7.9E-42 2.7E-46 387.8 23.1 267 668-967 9-304 (346)
101 2wtk_C Serine/threonine-protei 100.0 1.5E-41 5E-46 377.8 24.7 267 668-966 4-275 (305)
102 3lij_A Calcium/calmodulin depe 100.0 1.2E-41 4.1E-46 405.1 25.7 257 669-961 37-298 (494)
103 3bhy_A Death-associated protei 100.0 5.8E-42 2E-46 376.8 21.1 264 668-965 4-276 (283)
104 3p1a_A MYT1 kinase, membrane-a 100.0 1.3E-41 4.4E-46 380.1 24.1 254 668-960 56-310 (311)
105 4eqm_A Protein kinase; transfe 100.0 3.6E-41 1.2E-45 373.4 27.5 259 666-952 8-269 (294)
106 1t4h_A Serine/threonine-protei 100.0 3.2E-41 1.1E-45 372.5 27.0 258 666-960 23-288 (290)
107 2y7j_A Phosphorylase B kinase 100.0 2.2E-41 7.4E-46 387.0 26.4 258 669-960 94-365 (365)
108 2x7f_A TRAF2 and NCK-interacti 100.0 1.8E-41 6.2E-46 380.9 25.3 264 667-965 22-297 (326)
109 3kvw_A DYRK2, dual specificity 100.0 2.2E-41 7.6E-46 395.2 27.0 255 667-960 95-414 (429)
110 2pml_X PFPK7, Ser/Thr protein 100.0 5.2E-42 1.8E-46 389.0 20.5 268 666-968 28-336 (348)
111 3ork_A Serine/threonine protei 100.0 2.4E-42 8.2E-47 385.9 17.2 264 667-960 10-279 (311)
112 2yex_A Serine/threonine-protei 100.0 1.9E-41 6.6E-46 371.0 24.0 260 669-961 7-268 (276)
113 3nsz_A CK II alpha, casein kin 100.0 7E-41 2.4E-45 376.8 28.9 255 667-964 34-329 (330)
114 4aaa_A Cyclin-dependent kinase 100.0 1.7E-41 5.9E-46 382.4 23.3 265 667-965 23-317 (331)
115 3dbq_A Dual specificity protei 100.0 2.8E-41 9.7E-46 382.7 25.1 260 666-960 6-279 (343)
116 3mi9_A Cell division protein k 100.0 3E-41 1E-45 383.6 25.0 265 668-962 16-319 (351)
117 2b9h_A MAP kinase FUS3, mitoge 100.0 3.9E-41 1.3E-45 382.6 25.9 307 668-1002 10-352 (353)
118 3qyz_A Mitogen-activated prote 100.0 4.2E-41 1.4E-45 384.6 26.1 259 669-961 27-320 (364)
119 2j7t_A Serine/threonine-protei 100.0 2.4E-41 8.1E-46 375.6 23.1 263 668-965 18-286 (302)
120 3eb0_A Putative uncharacterize 100.0 3.4E-41 1.2E-45 388.0 25.2 257 666-962 4-329 (383)
121 3qd2_B Eukaryotic translation 100.0 1.3E-41 4.6E-46 382.3 21.0 270 668-961 5-332 (332)
122 3fme_A Dual specificity mitoge 100.0 2.6E-41 8.9E-46 372.8 22.9 262 665-960 3-272 (290)
123 4exu_A Mitogen-activated prote 100.0 5.5E-41 1.9E-45 384.6 26.2 259 668-966 41-335 (371)
124 3i6u_A CDS1, serine/threonine- 100.0 1.2E-41 4E-46 396.5 20.0 264 668-966 134-411 (419)
125 2zmd_A Dual specificity protei 100.0 5.2E-41 1.8E-45 387.3 25.0 261 666-961 53-327 (390)
126 3p86_A Serine/threonine-protei 100.0 1E-40 3.5E-45 372.6 25.9 257 664-954 32-291 (309)
127 2vwi_A Serine/threonine-protei 100.0 1.7E-41 5.7E-46 376.6 19.1 274 664-965 10-298 (303)
128 1j1b_A Glycogen synthase kinas 100.0 1.2E-40 4E-45 388.1 26.8 258 668-965 53-347 (420)
129 1x8b_A WEE1HU, WEE1-like prote 100.0 9.8E-41 3.4E-45 367.1 24.0 254 668-961 10-286 (289)
130 1z57_A Dual specificity protei 100.0 8.5E-41 2.9E-45 376.6 23.8 257 666-961 11-335 (339)
131 3kul_A Ephrin type-A receptor 100.0 1.1E-40 3.9E-45 374.9 24.5 256 664-947 44-303 (325)
132 1blx_A Cyclin-dependent kinase 100.0 1.8E-40 6E-45 372.8 26.0 264 667-964 9-306 (326)
133 4e7w_A Glycogen synthase kinas 100.0 1.9E-40 6.6E-45 383.1 27.0 259 668-966 39-333 (394)
134 3com_A Serine/threonine-protei 100.0 1.6E-40 5.4E-45 371.2 25.4 262 667-965 27-289 (314)
135 3coi_A Mitogen-activated prote 100.0 2.8E-40 9.4E-45 376.0 27.5 259 668-966 23-317 (353)
136 3an0_A Dual specificity mitoge 100.0 8.3E-41 2.8E-45 378.1 22.9 263 663-960 45-316 (340)
137 2wei_A Calmodulin-domain prote 100.0 7.7E-41 2.6E-45 369.1 21.6 260 668-963 21-285 (287)
138 3e3p_A Protein kinase, putativ 100.0 7.4E-41 2.5E-45 381.4 22.0 261 667-964 21-324 (360)
139 2psq_A Fibroblast growth facto 100.0 2.9E-40 9.8E-45 378.4 26.6 258 665-954 77-357 (370)
140 3a7i_A MST3 kinase, serine/thr 100.0 3E-40 1E-44 367.1 26.0 256 668-960 21-276 (303)
141 1wak_A Serine/threonine-protei 100.0 6.3E-41 2.2E-45 386.7 21.3 255 667-960 35-397 (397)
142 3rgf_A Cyclin-dependent kinase 100.0 1.3E-40 4.4E-45 386.2 23.8 264 669-966 20-345 (405)
143 2i6l_A Mitogen-activated prote 100.0 1.5E-40 5.2E-45 371.6 23.5 263 668-965 10-316 (320)
144 3pg1_A Mitogen-activated prote 100.0 1.7E-40 6E-45 378.9 24.3 259 668-961 21-323 (362)
145 3q60_A ROP5B; pseudokinase, tr 100.0 4.3E-42 1.5E-46 393.8 10.8 262 669-966 62-364 (371)
146 2eu9_A Dual specificity protei 100.0 1.6E-40 5.5E-45 377.1 23.6 262 666-966 16-345 (355)
147 2w5a_A Serine/threonine-protei 100.0 1.3E-40 4.4E-45 365.2 21.7 260 668-960 5-273 (279)
148 3qup_A Tyrosine-protein kinase 100.0 1.4E-40 4.7E-45 373.4 22.3 275 665-966 19-310 (323)
149 2ycf_A Serine/threonine-protei 100.0 6.9E-41 2.3E-45 375.9 19.7 262 668-964 9-284 (322)
150 3byv_A Rhoptry kinase; malaria 100.0 3.2E-42 1.1E-46 395.8 8.7 252 668-961 72-366 (377)
151 3vhe_A Vascular endothelial gr 100.0 1.1E-40 3.8E-45 379.7 20.5 261 664-955 17-349 (359)
152 2vx3_A Dual specificity tyrosi 100.0 2.3E-40 8E-45 380.9 23.3 256 668-962 53-380 (382)
153 4hcu_A Tyrosine-protein kinase 100.0 4.3E-40 1.5E-44 359.4 24.1 255 664-955 5-260 (269)
154 3l9p_A Anaplastic lymphoma kin 100.0 1.2E-40 4.3E-45 381.0 20.6 270 665-966 67-350 (367)
155 4euu_A Serine/threonine-protei 100.0 3.7E-40 1.3E-44 369.5 23.9 257 666-956 6-304 (319)
156 2clq_A Mitogen-activated prote 100.0 1E-39 3.5E-44 361.0 25.7 262 666-961 19-285 (295)
157 3dtc_A Mitogen-activated prote 100.0 8.4E-40 2.9E-44 357.1 23.8 252 666-955 4-267 (271)
158 1rjb_A FL cytokine receptor; k 100.0 4.2E-40 1.4E-44 372.8 22.0 263 663-956 39-329 (344)
159 3kmu_A ILK, integrin-linked ki 100.0 1.1E-39 3.9E-44 355.5 24.5 251 665-954 6-263 (271)
160 1zy4_A Serine/threonine-protei 100.0 1.3E-39 4.6E-44 360.8 24.9 273 669-966 6-295 (303)
161 2izr_A Casein kinase I isoform 100.0 1.4E-39 4.9E-44 366.6 25.4 274 665-965 5-295 (330)
162 1q8y_A SR protein kinase; tran 100.0 4E-40 1.4E-44 377.0 21.2 260 663-961 13-340 (373)
163 1p4o_A Insulin-like growth fac 100.0 4E-40 1.4E-44 369.4 20.7 278 662-967 18-311 (322)
164 1t46_A HOMO sapiens V-KIT hard 100.0 8.5E-40 2.9E-44 364.8 23.0 260 664-954 18-300 (313)
165 3tt0_A Basic fibroblast growth 100.0 2.9E-39 1E-43 371.8 28.2 260 664-955 64-346 (382)
166 3kfa_A Tyrosine-protein kinase 100.0 1E-39 3.4E-44 359.9 23.2 257 663-954 7-264 (288)
167 3fhr_A MAP kinase-activated pr 100.0 4.4E-40 1.5E-44 371.8 20.7 254 667-960 26-293 (336)
168 2ivs_A Proto-oncogene tyrosine 100.0 8.5E-40 2.9E-44 365.0 22.4 262 662-955 16-305 (314)
169 3gen_A Tyrosine-protein kinase 100.0 1.9E-39 6.4E-44 356.9 24.4 257 662-955 17-274 (283)
170 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.6E-39 5.4E-44 354.6 23.5 254 665-955 4-258 (268)
171 3lb7_A RAF proto-oncogene seri 100.0 2.5E-39 8.6E-44 360.9 25.7 261 662-957 29-296 (307)
172 1luf_A Muscle-specific tyrosin 100.0 1.6E-39 5.4E-44 367.7 24.3 258 665-954 43-328 (343)
173 3s95_A LIMK-1, LIM domain kina 100.0 6.2E-40 2.1E-44 366.0 20.0 264 666-954 7-275 (310)
174 2h34_A Serine/threonine-protei 100.0 2.6E-39 8.9E-44 361.0 24.8 250 666-944 31-282 (309)
175 3ugc_A Tyrosine-protein kinase 100.0 1.5E-39 5.1E-44 360.1 22.6 256 664-947 5-281 (295)
176 3cbl_A C-FES, proto-oncogene t 100.0 7E-40 2.4E-44 376.3 20.3 256 663-947 108-364 (377)
177 2wqm_A Serine/threonine-protei 100.0 4.8E-39 1.6E-43 358.6 26.5 257 667-954 30-290 (310)
178 3kex_A Receptor tyrosine-prote 100.0 5.8E-40 2E-44 369.0 18.5 257 664-950 8-269 (325)
179 4f0f_A Serine/threonine-protei 100.0 5.3E-39 1.8E-43 354.1 25.8 253 665-954 15-282 (287)
180 3cek_A Dual specificity protei 100.0 4.1E-39 1.4E-43 359.9 24.3 263 664-961 23-299 (313)
181 1mp8_A Focal adhesion kinase 1 100.0 3.6E-39 1.2E-43 354.5 23.3 256 664-954 10-269 (281)
182 2i1m_A Macrophage colony-stimu 100.0 1.6E-39 5.5E-44 366.3 20.7 260 664-954 41-319 (333)
183 4fvq_A Tyrosine-protein kinase 100.0 2.2E-39 7.4E-44 357.4 21.1 250 665-955 4-269 (289)
184 3a99_A Proto-oncogene serine/t 100.0 1.3E-39 4.6E-44 365.3 19.7 256 666-964 40-303 (320)
185 3poz_A Epidermal growth factor 100.0 2.7E-39 9.1E-44 364.0 21.9 257 665-955 11-272 (327)
186 1csn_A Casein kinase-1; phosph 100.0 7.7E-39 2.6E-43 354.5 25.1 256 665-947 6-273 (298)
187 1k9a_A Carboxyl-terminal SRC k 100.0 7.3E-39 2.5E-43 376.4 26.0 251 660-948 184-436 (450)
188 3t9t_A Tyrosine-protein kinase 100.0 6.5E-39 2.2E-43 349.1 23.6 254 664-954 3-257 (267)
189 2yfx_A Tyrosine-protein kinase 100.0 1.8E-39 6.1E-44 365.2 19.8 265 664-960 25-303 (327)
190 2dyl_A Dual specificity mitoge 100.0 5E-39 1.7E-43 359.4 23.2 262 665-961 21-290 (318)
191 1opk_A P150, C-ABL, proto-onco 100.0 3.4E-39 1.2E-43 383.7 23.0 254 663-947 214-468 (495)
192 2qol_A Ephrin receptor; recept 100.0 4.1E-39 1.4E-43 369.2 22.8 258 663-948 39-300 (373)
193 3aln_A Dual specificity mitoge 100.0 2.1E-39 7E-44 364.6 19.9 266 664-964 17-295 (327)
194 2xir_A Vascular endothelial gr 100.0 1.5E-39 5.1E-44 363.3 18.5 261 664-955 22-304 (316)
195 1qcf_A Haematopoetic cell kina 100.0 5.7E-39 2E-43 377.9 24.4 254 662-948 181-435 (454)
196 2pvf_A Fibroblast growth facto 100.0 9E-39 3.1E-43 360.7 24.5 259 664-954 30-311 (334)
197 2iwi_A Serine/threonine-protei 100.0 2.9E-39 1E-43 360.7 19.1 254 666-962 28-291 (312)
198 3og7_A AKAP9-BRAF fusion prote 100.0 1.1E-38 3.9E-43 352.1 23.5 257 662-953 17-280 (289)
199 4e5w_A Tyrosine-protein kinase 100.0 1.1E-38 3.8E-43 354.0 23.4 257 666-953 18-294 (302)
200 1fvr_A Tyrosine-protein kinase 100.0 7.3E-39 2.5E-43 360.2 22.1 255 666-955 22-294 (327)
201 1u59_A Tyrosine-protein kinase 100.0 2.5E-38 8.7E-43 348.9 25.9 259 665-956 5-267 (287)
202 3lxl_A Tyrosine-protein kinase 100.0 7.8E-39 2.7E-43 360.0 21.4 274 664-966 18-311 (327)
203 1u46_A ACK-1, activated CDC42 100.0 5.8E-39 2E-43 354.1 19.8 260 665-954 14-277 (291)
204 3lzb_A Epidermal growth factor 100.0 9.7E-39 3.3E-43 359.5 21.9 253 665-947 11-268 (327)
205 1mqb_A Ephrin type-A receptor 100.0 3.3E-38 1.1E-42 356.1 26.1 256 664-947 39-299 (333)
206 1qpc_A LCK kinase; alpha beta 100.0 1.9E-38 6.5E-43 348.1 23.2 251 662-945 6-257 (279)
207 3cc6_A Protein tyrosine kinase 100.0 1.8E-38 6.2E-43 348.8 22.9 257 664-955 7-267 (281)
208 1xbb_A Tyrosine-protein kinase 100.0 2.6E-38 8.9E-43 349.5 24.2 254 665-947 12-269 (291)
209 3soc_A Activin receptor type-2 100.0 8.2E-39 2.8E-43 359.2 19.4 250 665-948 20-309 (322)
210 1byg_A CSK, protein (C-termina 100.0 9.6E-39 3.3E-43 350.4 19.0 251 659-947 11-263 (278)
211 2qkw_B Protein kinase; three-h 100.0 4.7E-39 1.6E-43 360.8 16.9 256 667-955 37-309 (321)
212 3pls_A Macrophage-stimulating 100.0 6.2E-38 2.1E-42 347.1 25.2 252 670-948 22-278 (298)
213 3brb_A Proto-oncogene tyrosine 100.0 3.6E-38 1.2E-42 352.1 23.5 259 665-954 30-301 (313)
214 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.6E-38 9E-43 371.9 23.1 261 663-960 178-441 (452)
215 3sv0_A Casein kinase I-like; t 100.0 6.6E-38 2.2E-42 369.7 26.4 277 667-970 5-297 (483)
216 4hgt_A Casein kinase I isoform 100.0 4.4E-38 1.5E-42 347.8 23.4 272 668-966 8-295 (296)
217 3op5_A Serine/threonine-protei 100.0 5.9E-39 2E-43 366.8 16.7 278 667-967 33-345 (364)
218 2a19_B Interferon-induced, dou 100.0 2.8E-38 9.6E-43 347.2 20.7 247 668-959 10-272 (284)
219 2buj_A Serine/threonine-protei 100.0 1.5E-38 5E-43 355.8 18.0 265 666-955 26-300 (317)
220 3f66_A Hepatocyte growth facto 100.0 1.3E-37 4.3E-42 345.0 24.4 253 668-947 24-281 (298)
221 3q4u_A Activin receptor type-1 100.0 5.9E-38 2E-42 347.9 21.6 251 666-954 5-295 (301)
222 3p23_A Serine/threonine-protei 100.0 2.3E-38 7.8E-43 369.7 19.2 260 666-964 21-293 (432)
223 2jii_A Serine/threonine-protei 100.0 2.7E-38 9.2E-43 359.5 19.1 252 668-948 41-327 (352)
224 3lxp_A Non-receptor tyrosine-p 100.0 6.6E-38 2.3E-42 351.1 21.7 255 666-953 28-302 (318)
225 4eut_A Serine/threonine-protei 100.0 4.8E-38 1.6E-42 363.4 21.1 251 667-947 7-299 (396)
226 2rio_A Serine/threonine-protei 100.0 8.1E-38 2.8E-42 365.8 23.0 257 668-961 14-302 (434)
227 3uim_A Brassinosteroid insensi 100.0 6.3E-39 2.1E-43 360.4 12.9 260 666-958 27-308 (326)
228 3m2w_A MAP kinase-activated pr 100.0 7.6E-38 2.6E-42 347.4 21.3 233 668-961 16-263 (299)
229 3uzp_A CKI-delta, CKID, casein 100.0 1.4E-37 5E-42 343.8 23.3 253 668-947 8-270 (296)
230 3ll6_A Cyclin G-associated kin 100.0 7.2E-38 2.5E-42 352.6 21.0 265 665-956 24-303 (337)
231 2eva_A TAK1 kinase - TAB1 chim 100.0 1.6E-37 5.3E-42 346.4 23.4 253 666-962 5-269 (307)
232 2h8h_A Proto-oncogene tyrosine 100.0 8.6E-38 2.9E-42 375.0 22.2 262 662-960 260-524 (535)
233 2v62_A Serine/threonine-protei 100.0 4.4E-38 1.5E-42 356.8 18.6 259 666-947 34-318 (345)
234 3e7e_A HBUB1, BUB1A, mitotic c 100.0 7.9E-38 2.7E-42 357.5 20.1 249 665-950 61-331 (365)
235 2ozo_A Tyrosine-protein kinase 100.0 2.6E-37 8.9E-42 376.3 25.6 253 666-947 332-588 (613)
236 3c1x_A Hepatocyte growth facto 100.0 7E-38 2.4E-42 358.7 19.3 251 670-947 90-345 (373)
237 4fl3_A Tyrosine-protein kinase 100.0 3.2E-37 1.1E-41 376.5 24.7 244 675-947 375-621 (635)
238 2w1i_A JAK2; chromosomal rearr 100.0 2.6E-37 8.9E-42 347.5 22.0 257 665-953 37-314 (326)
239 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.1E-37 3.7E-42 348.9 17.3 261 662-954 26-295 (319)
240 2nru_A Interleukin-1 receptor- 100.0 3.1E-37 1.1E-41 343.3 20.0 253 670-954 32-299 (307)
241 3g2f_A Bone morphogenetic prot 100.0 3.4E-37 1.2E-41 347.6 20.1 267 664-960 8-323 (336)
242 3mdy_A Bone morphogenetic prot 100.0 8.7E-37 3E-41 344.1 23.4 250 668-955 36-325 (337)
243 3qa8_A MGC80376 protein; kinas 100.0 5.1E-38 1.7E-42 378.7 12.7 260 668-961 13-304 (676)
244 2vuw_A Serine/threonine-protei 100.0 1.8E-38 6.3E-43 358.4 7.2 247 666-959 17-336 (336)
245 3dzo_A Rhoptry kinase domain; 100.0 1.1E-37 3.8E-42 362.3 11.5 255 668-964 77-373 (413)
246 2j0j_A Focal adhesion kinase 1 100.0 5.7E-36 2E-40 366.7 26.4 254 665-953 386-643 (656)
247 1b6c_B TGF-B superfamily recep 100.0 2.3E-36 7.9E-41 341.6 20.3 250 668-955 41-330 (342)
248 3uqc_A Probable conserved tran 100.0 1.7E-36 5.7E-41 334.5 18.6 231 661-950 23-258 (286)
249 3gxj_A TGF-beta receptor type- 100.0 6E-38 2E-42 348.0 2.6 247 669-953 3-289 (303)
250 2pzi_A Probable serine/threoni 100.0 9.6E-36 3.3E-40 367.8 12.8 242 666-959 77-325 (681)
251 3ewk_A Sensor protein; PAS dom 100.0 6.4E-31 2.2E-35 279.3 31.1 220 202-585 2-227 (227)
252 4azs_A Methyltransferase WBDD; 100.0 7.7E-29 2.6E-33 298.2 11.5 190 675-897 240-437 (569)
253 3en9_A Glycoprotease, O-sialog 99.9 7.3E-25 2.5E-29 262.1 6.0 194 672-899 339-539 (540)
254 1zar_A RIO2 kinase; serine kin 99.9 1.4E-22 4.9E-27 222.3 10.1 135 670-819 91-240 (282)
255 4f3l_A Mclock, circadian locom 99.8 9.3E-20 3.2E-24 207.0 14.8 108 482-592 251-359 (361)
256 4f3l_B BMAL1B; BHLH, PAS, circ 99.8 5.7E-19 1.9E-23 202.2 15.8 108 481-591 277-386 (387)
257 2gj3_A Nitrogen fixation regul 99.8 7.9E-18 2.7E-22 158.6 16.0 119 186-307 2-120 (120)
258 1zth_A RIO1 serine protein kin 99.8 9E-19 3.1E-23 189.6 10.2 141 670-821 48-219 (258)
259 2gj3_A Nitrogen fixation regul 99.7 3.7E-17 1.3E-21 153.9 16.2 114 474-590 7-120 (120)
260 2pr5_A Blue-light photorecepto 99.7 3.4E-17 1.2E-21 156.9 15.7 122 192-315 2-123 (132)
261 1n9l_A PHOT-LOV1, putative blu 99.7 4.5E-17 1.6E-21 151.0 15.7 109 197-305 1-109 (109)
262 2pr5_A Blue-light photorecepto 99.7 8.3E-17 2.8E-21 154.2 14.4 118 475-594 2-119 (132)
263 3ue6_A Aureochrome1; PAS/LOV d 99.7 1.6E-16 5.4E-21 157.6 16.3 140 175-314 21-160 (166)
264 3rty_A Period circadian protei 99.7 1.5E-16 5.3E-21 177.3 18.0 108 482-592 154-267 (339)
265 1n9l_A PHOT-LOV1, putative blu 99.7 2.3E-16 7.8E-21 146.2 15.8 108 481-588 2-109 (109)
266 4hia_A LOV protein; PAS, HTH, 99.7 2.3E-16 7.9E-21 158.8 16.9 127 187-313 5-131 (176)
267 4hia_A LOV protein; PAS, HTH, 99.7 3.1E-16 1E-20 157.9 15.9 119 474-595 9-130 (176)
268 3p7n_A Sensor histidine kinase 99.7 3E-16 1E-20 169.3 15.6 137 174-310 48-184 (258)
269 3f1p_B ARYL hydrocarbon recept 99.7 1.4E-16 5E-21 149.8 10.6 115 474-591 4-120 (121)
270 3mr0_A Sensory box histidine k 99.7 2.4E-16 8.2E-21 153.4 12.1 131 182-315 2-134 (142)
271 3t50_A Blue-light-activated hi 99.6 1E-15 3.5E-20 144.6 14.1 121 194-314 2-122 (128)
272 3p7n_A Sensor histidine kinase 99.6 6.1E-16 2.1E-20 166.8 13.9 133 460-592 50-183 (258)
273 3ue6_A Aureochrome1; PAS/LOV d 99.6 7.5E-16 2.6E-20 152.7 13.2 129 462-593 24-156 (166)
274 3f1p_A Endothelial PAS domain- 99.6 4.3E-16 1.5E-20 145.5 10.6 109 480-591 7-116 (117)
275 3ewk_A Sensor protein; PAS dom 99.6 8.8E-16 3E-20 162.3 14.2 129 167-302 93-227 (227)
276 3mr0_A Sensory box histidine k 99.6 1.6E-15 5.3E-20 147.6 14.6 120 472-594 9-130 (142)
277 3f1p_B ARYL hydrocarbon recept 99.6 4.1E-16 1.4E-20 146.7 9.9 116 190-308 3-120 (121)
278 3t50_A Blue-light-activated hi 99.6 2.7E-15 9.2E-20 141.6 13.0 117 477-596 2-121 (128)
279 1d06_A Nitrogen fixation regul 99.6 1.1E-15 3.6E-20 146.1 9.9 125 175-304 2-130 (130)
280 4gyi_A RIO2 kinase; protein ki 99.6 6.1E-16 2.1E-20 174.3 9.4 140 670-820 96-264 (397)
281 3sw1_A Sensory box protein; li 99.6 7E-15 2.4E-19 145.1 15.9 131 186-319 22-155 (162)
282 4eet_B Phototropin-2; LOV, blu 99.6 1.1E-14 3.7E-19 133.7 15.6 114 194-307 2-115 (115)
283 4eet_B Phototropin-2; LOV, blu 99.6 1.4E-14 4.7E-19 133.0 16.1 111 477-590 2-115 (115)
284 3f1p_A Endothelial PAS domain- 99.6 1.4E-15 4.9E-20 141.8 9.3 108 198-308 8-116 (117)
285 2r78_A Sensor protein; sensory 99.6 1E-14 3.6E-19 136.7 14.7 114 182-304 4-117 (117)
286 1d06_A Nitrogen fixation regul 99.6 6.8E-15 2.3E-19 140.4 13.6 124 459-587 2-130 (130)
287 3mqq_A Transcriptional regulat 99.6 2.2E-15 7.7E-20 141.3 9.8 115 190-309 4-119 (120)
288 3mqq_A Transcriptional regulat 99.6 2.3E-15 7.7E-20 141.3 9.7 116 472-592 3-119 (120)
289 2z6d_A Phototropin-2; PAS-fold 99.6 2.5E-14 8.4E-19 133.0 16.3 127 186-312 3-129 (130)
290 3nja_A Probable ggdef family p 99.6 4.8E-15 1.6E-19 138.4 11.0 122 184-308 2-125 (125)
291 2vv6_A FIXL, sensor protein FI 99.6 7.2E-15 2.5E-19 137.7 11.9 113 197-314 1-117 (119)
292 3nja_A Probable ggdef family p 99.6 7.3E-15 2.5E-19 137.1 11.7 116 473-591 8-125 (125)
293 3lyx_A Sensory BOX/ggdef domai 99.6 2.9E-14 1E-18 131.5 15.2 120 186-308 4-123 (124)
294 3k3c_A Protein RV1364C/MT1410; 99.6 3.8E-15 1.3E-19 146.8 9.2 126 185-315 13-144 (158)
295 2r78_A Sensor protein; sensory 99.6 3.8E-14 1.3E-18 132.8 15.0 105 474-587 13-117 (117)
296 2v0u_A NPH1-1, LOV2; kinase, t 99.6 6.4E-14 2.2E-18 133.5 16.3 139 474-622 4-145 (146)
297 2z6d_A Phototropin-2; PAS-fold 99.5 1.3E-13 4.3E-18 128.1 17.1 119 473-594 7-128 (130)
298 3mxq_A Sensor protein; PSI2, M 99.5 5.8E-15 2E-19 145.6 8.1 124 183-310 16-151 (152)
299 2vv6_A FIXL, sensor protein FI 99.5 2.1E-14 7E-19 134.6 11.5 111 481-596 2-116 (119)
300 3h9w_A Diguanylate cyclase wit 99.5 1.2E-14 4.1E-19 135.2 9.1 111 481-593 2-113 (115)
301 2wkq_A NPH1-1, RAS-related C3 99.5 4.5E-14 1.5E-18 158.1 15.2 117 475-594 14-133 (332)
302 2wkq_A NPH1-1, RAS-related C3 99.5 5.6E-14 1.9E-18 157.3 15.4 121 194-314 16-136 (332)
303 3lyx_A Sensory BOX/ggdef domai 99.5 1E-13 3.4E-18 127.9 14.5 115 474-591 9-123 (124)
304 3bwl_A Sensor protein; structu 99.5 2.9E-14 1E-18 134.5 10.9 124 173-304 1-126 (126)
305 3kx0_X Uncharacterized protein 99.5 4.2E-14 1.4E-18 144.2 11.2 123 185-312 33-161 (185)
306 3luq_A Sensor protein; PAS, hi 99.5 1.1E-13 3.9E-18 126.8 13.0 113 188-304 2-114 (114)
307 3sw1_A Sensory box protein; li 99.5 4.4E-14 1.5E-18 139.3 10.5 121 474-594 27-147 (162)
308 4dj3_A Period circadian protei 99.5 1.4E-12 4.6E-17 143.9 23.2 106 483-591 175-284 (317)
309 3h9w_A Diguanylate cyclase wit 99.5 4.1E-14 1.4E-18 131.6 9.4 112 198-311 2-114 (115)
310 3bwl_A Sensor protein; structu 99.5 2.4E-13 8.3E-18 128.1 13.3 122 458-587 2-126 (126)
311 3k3c_A Protein RV1364C/MT1410; 99.5 1E-13 3.4E-18 136.6 11.1 122 468-594 13-140 (158)
312 3mxq_A Sensor protein; PSI2, M 99.5 5.7E-14 2E-18 138.5 8.8 117 472-592 22-150 (152)
313 3luq_A Sensor protein; PAS, hi 99.5 3.3E-13 1.1E-17 123.7 13.3 110 474-587 5-114 (114)
314 2kdk_A ARYL hydrocarbon recept 99.5 2E-13 6.8E-18 127.7 12.0 114 475-591 6-121 (121)
315 3eeh_A Putative light and redo 99.5 1.4E-13 4.8E-18 127.5 10.2 121 180-304 2-125 (125)
316 2v0u_A NPH1-1, LOV2; kinase, t 99.5 8.7E-13 3E-17 125.5 15.7 120 192-311 5-124 (146)
317 3kx0_X Uncharacterized protein 99.5 1.5E-13 5.2E-18 140.0 10.4 141 468-615 33-179 (185)
318 1byw_A Protein (human ERG pota 99.5 1.4E-12 4.8E-17 117.2 15.6 107 200-306 2-110 (110)
319 3icy_A Sensor protein; sensory 99.4 9.1E-14 3.1E-18 128.7 7.8 112 473-587 5-118 (118)
320 4dj2_A Period circadian protei 99.4 7.7E-13 2.6E-17 146.1 15.9 108 482-592 176-286 (320)
321 3olo_A Two-component sensor hi 99.4 4.7E-13 1.6E-17 123.8 11.8 114 181-304 5-118 (118)
322 2kdk_A ARYL hydrocarbon recept 99.4 4.4E-13 1.5E-17 125.4 11.2 111 194-307 8-120 (121)
323 3d72_A Vivid PAS protein VVD; 99.4 6.3E-13 2.1E-17 129.3 12.6 124 170-302 15-149 (149)
324 3gdi_A Period circadian protei 99.4 1.3E-12 4.3E-17 143.8 16.3 106 483-591 166-274 (309)
325 1v9y_A Heme PAS sensor protein 99.4 2.8E-13 9.7E-18 133.5 9.8 140 170-314 21-164 (167)
326 3icy_A Sensor protein; sensory 99.4 1.7E-13 5.9E-18 126.7 7.7 115 187-304 2-118 (118)
327 3eeh_A Putative light and redo 99.4 3.4E-13 1.2E-17 124.8 9.6 112 472-587 11-125 (125)
328 2l0w_A Potassium voltage-gated 99.4 3.6E-12 1.2E-16 120.1 16.7 118 189-306 19-138 (138)
329 3mjq_A Uncharacterized protein 99.4 4.9E-13 1.7E-17 125.1 9.5 118 192-315 2-119 (126)
330 1byw_A Protein (human ERG pota 99.4 4.3E-12 1.5E-16 114.0 15.1 107 483-589 2-110 (110)
331 3olo_A Two-component sensor hi 99.4 1.3E-12 4.4E-17 120.8 11.6 104 474-587 15-118 (118)
332 3mjq_A Uncharacterized protein 99.4 5.4E-13 1.9E-17 124.8 9.0 117 475-597 2-118 (126)
333 2l0w_A Potassium voltage-gated 99.4 7.2E-12 2.5E-16 118.0 14.2 113 474-589 21-138 (138)
334 4eho_A Bacteriophytochrome, PA 99.4 4.2E-13 1.4E-17 163.1 6.8 118 472-593 518-635 (635)
335 1v9y_A Heme PAS sensor protein 99.3 2.7E-12 9.1E-17 126.4 11.2 137 455-596 22-163 (167)
336 3mfx_A Sensory BOX/ggdef famil 99.3 3.1E-12 1E-16 122.6 10.9 112 188-305 6-124 (129)
337 3d72_A Vivid PAS protein VVD; 99.3 4.4E-12 1.5E-16 123.2 12.2 108 474-585 28-149 (149)
338 3mfx_A Sensory BOX/ggdef famil 99.3 5.3E-12 1.8E-16 120.9 10.4 109 474-588 9-124 (129)
339 3vol_A Aerotaxis transducer AE 99.3 1.1E-11 3.8E-16 131.5 13.5 118 184-314 17-146 (233)
340 4eho_A Bacteriophytochrome, PA 99.3 3.4E-13 1.2E-17 163.9 0.4 118 189-310 518-635 (635)
341 2qkp_A Uncharacterized protein 99.2 2.2E-11 7.5E-16 119.9 9.9 120 188-314 18-141 (151)
342 3tm0_A Aminoglycoside 3'-phosp 99.2 3.6E-11 1.2E-15 129.8 12.1 139 669-819 14-212 (263)
343 4hi4_A Aerotaxis transducer AE 99.2 7.9E-11 2.7E-15 110.8 12.8 106 188-306 4-121 (121)
344 3fc7_A HTR-like protein, senso 99.2 9.4E-12 3.2E-16 116.3 6.1 108 187-304 17-125 (125)
345 2vlg_A Sporulation kinase A; h 99.2 2.6E-11 8.9E-16 112.8 7.5 94 476-575 3-96 (111)
346 4f3l_A Mclock, circadian locom 99.2 3.1E-11 1.1E-15 136.8 8.5 108 200-310 252-360 (361)
347 3b33_A Sensor protein; structu 99.2 1.1E-10 3.6E-15 108.0 10.7 107 190-304 8-115 (115)
348 2vlg_A Sporulation kinase A; h 99.1 4.6E-11 1.6E-15 111.1 7.5 95 193-293 3-97 (111)
349 3fc7_A HTR-like protein, senso 99.1 2.4E-11 8.4E-16 113.5 5.5 106 472-587 19-125 (125)
350 3fg8_A Uncharacterized protein 99.1 1.6E-11 5.6E-16 114.9 4.0 108 188-306 11-118 (118)
351 4hi4_A Aerotaxis transducer AE 99.1 2.7E-10 9.1E-15 107.1 12.0 104 473-589 6-121 (121)
352 3vol_A Aerotaxis transducer AE 99.1 1.7E-10 5.9E-15 122.3 11.8 107 474-593 24-142 (233)
353 3fg8_A Uncharacterized protein 99.1 6.6E-11 2.2E-15 110.7 7.0 105 474-589 14-118 (118)
354 3b33_A Sensor protein; structu 99.1 3.3E-10 1.1E-14 104.5 10.6 106 474-587 9-115 (115)
355 2qkp_A Uncharacterized protein 99.1 2.7E-10 9.4E-15 112.0 9.6 116 474-595 21-139 (151)
356 4f3l_B BMAL1B; BHLH, PAS, circ 99.1 1.8E-10 6E-15 131.7 9.3 108 198-308 277-386 (387)
357 1ll8_A PAS kinase; PAS domain, 99.0 7.7E-11 2.6E-15 109.1 3.5 102 197-304 6-113 (114)
358 3a0r_A Sensor protein; four he 99.0 2.3E-10 8E-15 128.5 7.5 139 474-622 10-149 (349)
359 1ll8_A PAS kinase; PAS domain, 99.0 1.1E-10 3.7E-15 108.0 3.7 103 480-588 6-114 (114)
360 1nd4_A Aminoglycoside 3'-phosp 99.0 6.6E-10 2.2E-14 119.2 9.7 134 669-819 20-213 (264)
361 3cax_A Uncharacterized protein 99.0 9.5E-10 3.2E-14 124.8 9.3 121 185-314 235-355 (369)
362 3dxp_A Putative acyl-COA dehyd 98.9 1.3E-09 4.3E-14 123.4 9.5 142 671-820 40-248 (359)
363 3a0r_A Sensor protein; four he 98.9 4.6E-10 1.6E-14 126.0 5.3 121 184-314 3-124 (349)
364 2w0n_A Sensor protein DCUS; si 98.9 2.5E-10 8.6E-15 105.0 2.4 108 182-304 8-118 (118)
365 3a0s_A Sensor protein; PAS-fol 98.9 1.3E-08 4.5E-13 88.6 12.5 95 198-302 1-96 (96)
366 2ykf_A Pdtas, probable sensor 98.4 1.8E-10 6.3E-15 126.9 0.0 113 475-597 173-294 (305)
367 1nwz_A PYP, photoactive yellow 98.8 2.4E-08 8.3E-13 93.5 12.5 100 192-297 20-121 (125)
368 3a0s_A Sensor protein; PAS-fol 98.8 2.3E-08 8E-13 86.9 11.7 95 481-585 1-96 (96)
369 3sg8_A APH(2'')-ID; antibiotic 98.8 3.9E-09 1.3E-13 116.5 7.7 134 674-821 25-224 (304)
370 2w0n_A Sensor protein DCUS; si 98.8 1E-09 3.4E-14 100.9 2.4 101 472-587 15-118 (118)
371 1mzu_A PPR; photoactive yellow 98.8 3.5E-08 1.2E-12 92.5 12.5 99 193-297 26-126 (129)
372 3cax_A Uncharacterized protein 98.8 8E-09 2.7E-13 117.1 9.8 114 474-596 241-354 (369)
373 2jhe_A Transcription regulator 98.8 6.8E-09 2.3E-13 105.6 7.1 109 185-308 76-190 (190)
374 2ykf_A Pdtas, probable sensor 98.2 1.2E-09 3.9E-14 120.5 0.0 160 146-316 107-296 (305)
375 3rty_A Period circadian protei 98.7 2.6E-08 8.9E-13 110.9 10.2 106 199-307 154-265 (339)
376 1nwz_A PYP, photoactive yellow 98.7 8.9E-08 3.1E-12 89.6 11.6 100 475-580 20-121 (125)
377 2jhe_A Transcription regulator 98.7 2.8E-08 9.5E-13 101.1 8.0 103 474-591 82-190 (190)
378 1mzu_A PPR; photoactive yellow 98.7 1.3E-07 4.5E-12 88.6 11.5 100 475-580 25-126 (129)
379 3r70_A Aminoglycoside phosphot 98.6 2E-07 6.9E-12 103.5 12.5 133 670-820 38-237 (320)
380 4dj3_A Period circadian protei 98.5 2.5E-07 8.6E-12 101.9 11.8 98 208-305 180-281 (317)
381 3gdi_A Period circadian protei 98.5 5.1E-07 1.7E-11 99.1 12.2 99 208-306 171-272 (309)
382 4dj2_A Period circadian protei 98.4 3.9E-07 1.3E-11 100.5 9.8 99 208-306 182-283 (320)
383 3tdw_A Gentamicin resistance p 98.4 2.2E-06 7.4E-11 94.5 14.2 133 674-820 24-224 (306)
384 4gkh_A Aminoglycoside 3'-phosp 98.4 2.6E-06 8.8E-11 91.8 13.6 132 677-820 32-223 (272)
385 3ovc_A Hygromycin-B 4-O-kinase 98.2 5.9E-06 2E-10 93.2 11.6 77 671-757 43-122 (362)
386 2olc_A MTR kinase, methylthior 98.0 1.5E-05 5.2E-10 91.0 10.1 80 673-754 34-120 (397)
387 3d1u_A Putative fructosamine-3 97.9 2.3E-05 7.9E-10 85.4 8.6 77 672-756 18-97 (288)
388 3ats_A Putative uncharacterize 97.8 4.3E-05 1.5E-09 85.8 10.7 85 673-757 24-121 (357)
389 2q83_A YTAA protein; 2635576, 97.8 0.00014 4.7E-09 80.9 14.2 138 674-820 37-252 (346)
390 3jr1_A Putative fructosamine-3 97.5 0.00052 1.8E-08 75.4 12.1 76 673-756 40-118 (312)
391 2pyw_A Uncharacterized protein 97.3 0.00068 2.3E-08 77.9 11.5 77 673-753 38-122 (420)
392 3dxq_A Choline/ethanolamine ki 97.2 0.00057 1.9E-08 74.7 8.0 134 674-820 23-202 (301)
393 1oj5_A Steroid receptor coacti 97.0 0.00046 1.6E-08 64.3 4.6 96 208-304 13-113 (132)
394 1oj5_A Steroid receptor coacti 97.0 0.00074 2.5E-08 62.9 5.2 104 482-589 7-115 (132)
395 3csv_A Aminoglycoside phosphot 96.8 0.0024 8.1E-08 70.7 9.2 137 675-820 24-217 (333)
396 1nw1_A Choline kinase (49.2 KD 96.8 0.002 6.8E-08 74.2 8.8 74 674-756 78-159 (429)
397 2yle_A Protein spire homolog 1 96.8 0.0088 3E-07 61.0 12.2 122 754-937 33-156 (229)
398 2ppq_A HSK, HK, homoserine kin 96.8 0.0033 1.1E-07 69.1 10.0 142 672-820 25-217 (322)
399 3feg_A Choline/ethanolamine ki 96.8 0.0023 8E-08 72.1 8.4 139 674-820 55-254 (379)
400 3f7w_A Putative fructosamine-3 96.7 0.0044 1.5E-07 67.1 10.1 79 669-755 15-96 (288)
401 3c5i_A Choline kinase; choline 96.6 0.0034 1.2E-07 70.6 8.1 75 674-756 38-121 (369)
402 1zyl_A Hypothetical protein YI 96.5 0.0098 3.3E-07 65.4 11.3 138 675-820 32-223 (328)
403 2qg7_A Ethanolamine kinase PV0 96.5 0.015 5E-07 67.3 12.8 75 674-756 113-188 (458)
404 3i1a_A Spectinomycin phosphotr 96.4 0.013 4.3E-07 65.2 11.3 30 791-820 207-236 (339)
405 3f2s_A CK, chetk-alpha, cholin 96.1 0.016 5.5E-07 65.6 10.0 142 674-819 57-279 (401)
406 3mes_A Choline kinase; malaria 95.1 0.027 9.2E-07 64.4 7.1 75 674-756 75-157 (424)
407 3g15_A CK, chetk-alpha, cholin 92.6 0.3 1E-05 55.3 9.6 29 792-820 246-280 (401)
408 2ool_A Sensor protein; bacteri 88.3 1.3 4.4E-05 48.5 9.2 77 484-566 44-124 (337)
409 2ool_A Sensor protein; bacteri 83.2 1.5 5E-05 48.1 6.4 77 200-282 42-123 (337)
410 4ann_A ESSB; membrane protein, 80.8 3.8 0.00013 41.6 7.9 84 727-818 43-126 (215)
411 4ano_A ESSB; membrane protein, 76.0 4.6 0.00016 41.1 6.9 83 727-818 48-131 (219)
412 1p0z_A Sensor kinase CITA; tra 73.1 22 0.00075 32.6 10.5 89 188-305 38-127 (131)
413 4dah_A Sporulation kinase D; a 67.3 21 0.00071 35.6 9.7 98 186-308 55-154 (217)
414 2x6h_A GH13170P, VPS34, phosph 64.3 43 0.0015 40.1 12.7 82 732-818 476-574 (696)
415 1cja_A Protein (actin-fragmin 57.9 16 0.00056 39.5 6.9 140 670-820 70-237 (342)
416 4ew7_A Conjugative transfer: r 57.2 11 0.00036 32.9 4.2 44 182-228 13-56 (127)
417 3cxl_A N-chimerin; SH2, RHO-GA 57.0 1.2 4E-05 51.4 -2.4 64 672-739 145-214 (463)
418 4ew7_A Conjugative transfer: r 56.9 39 0.0013 29.4 7.6 91 474-571 22-112 (127)
419 3by8_A Sensor protein DCUS; hi 51.0 53 0.0018 30.5 8.7 91 187-307 43-134 (142)
420 1p0z_A Sensor kinase CITA; tra 49.7 62 0.0021 29.4 8.8 77 483-588 51-127 (131)
421 4dah_A Sporulation kinase D; a 47.9 35 0.0012 33.9 7.3 90 474-588 60-151 (217)
422 4e04_A Bacteriophytochrome (li 42.7 49 0.0017 35.7 7.7 53 202-261 32-84 (327)
423 4e04_A Bacteriophytochrome (li 42.4 52 0.0018 35.5 7.8 55 483-544 30-84 (327)
424 3lif_A Putative diguanylate cy 40.3 1.2E+02 0.0041 30.5 10.3 96 186-306 55-154 (254)
425 3ls8_A Phosphatidylinositol 3- 37.9 5.4E+02 0.019 30.1 16.0 82 732-818 402-500 (614)
426 3s7o_A Bacteriophytochrome; bi 32.3 24 0.00082 38.3 3.2 42 483-526 53-94 (343)
427 3s7o_A Bacteriophytochrome; bi 27.7 29 0.00097 37.8 2.8 40 202-243 55-94 (343)
428 3clo_A Transcriptional regulat 22.4 4.3E+02 0.015 26.8 10.8 47 184-232 28-74 (258)
429 3hhm_A Phosphatidylinositol-4, 21.8 1.4E+02 0.0047 37.6 7.5 41 774-818 918-960 (1091)
430 2y3a_A Phosphatidylinositol-4, 21.1 97 0.0033 39.1 6.1 24 795-818 940-963 (1092)
No 1
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=3.7e-59 Score=515.21 Aligned_cols=278 Identities=37% Similarity=0.658 Sum_probs=251.0
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.++|++++.||+|+||+||+|.++.+++.||||++.+...........+.+|+.+|+.|+|||||+++++|.+.+.+|||
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 46799999999999999999999999999999999876555555677899999999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
||||+||+|.+++.+. +.+++..++.|+.||+.||+|||++|||||||||+|||++.+|.+||+|||+|+.......
T Consensus 111 mEy~~gG~L~~~i~~~--~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~- 187 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK- 187 (311)
T ss_dssp ECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT-
T ss_pred EecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC-
Confidence 9999999999999875 4599999999999999999999999999999999999999999999999999976532111
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
.....+.+||+.|||||++.+..|+.++|||||||++|+|++|++||.+.+..+.+
T Consensus 188 ------------------------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~ 243 (311)
T 4aw0_A 188 ------------------------QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIF 243 (311)
T ss_dssp ------------------------CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred ------------------------cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 12234679999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh--cHHHHHcCCCcCCCChhhhhccCCCCC
Q 001869 908 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE--GANEIKKHPFFKGVNWALVRCMNPPEL 974 (1002)
Q Consensus 908 ~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~--~a~elL~Hp~f~~~~~~~~~~~~~~~~ 974 (1002)
.+++...+.+|. .+|+++++||.+||++||.+|||+.+ ....|++||||++++|..++...||.+
T Consensus 244 ~~i~~~~~~~p~--~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~~l~~~~pP~l 310 (311)
T 4aw0_A 244 AKIIKLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310 (311)
T ss_dssp HHHHHTCCCCCT--TCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTGGGSCCCCC
T ss_pred HHHHcCCCCCCc--ccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCCHHHhcCCCCCCC
Confidence 999999888775 47899999999999999999999654 345689999999999999998888853
No 2
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3e-57 Score=499.94 Aligned_cols=280 Identities=41% Similarity=0.720 Sum_probs=237.8
Q ss_pred cccCCcccccccccCCcEEEEEEEEc---CCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (1002)
+..++|++++.||+|+||+||+|++. .+++.||||++++...... ....+.+|+.+|++++|||||+++++|.+.+
T Consensus 21 ~~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 99 (304)
T 3ubd_A 21 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR-DRVRTKMERDILVEVNHPFIVKLHYAFQTEG 99 (304)
T ss_dssp CCGGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEE-ECC------CCCCCCCCTTEECEEEEEEETT
T ss_pred CCccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChH-HHHHHHHHHHHHHHCCCCCCCeEEEEEEECC
Confidence 34468999999999999999999984 4688999999987543322 2346778999999999999999999999999
Q ss_pred eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccC
Q 001869 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
.+|||||||+||+|.+++.+. +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+...
T Consensus 100 ~~~ivmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 177 (304)
T 3ubd_A 100 KLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI 177 (304)
T ss_dssp EEEEEECCCTTCEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC--
T ss_pred EEEEEEEcCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceecc
Confidence 999999999999999999875 459999999999999999999999999999999999999999999999999996432
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
.. .....+.+||+.|||||++.+..|+.++|||||||++|+|++|++||.+.+
T Consensus 178 ~~---------------------------~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~ 230 (304)
T 3ubd_A 178 DH---------------------------EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD 230 (304)
T ss_dssp ------------------------------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CC---------------------------CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC
Confidence 11 112345789999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhccCCCCCCCC
Q 001869 903 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAP 977 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p 977 (1002)
..+.+..+....+.+|. .+|+++++||.+||++||.+|||+. ..++|+++||||++++|+.+...+.+....|
T Consensus 231 ~~~~~~~i~~~~~~~p~--~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~idw~~l~~~~~~pP~~P 304 (304)
T 3ubd_A 231 RKETMTMILKAKLGMPQ--FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKP 304 (304)
T ss_dssp HHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSSCC
T ss_pred HHHHHHHHHcCCCCCCC--cCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCCCHHHHHhCCCCcCcCC
Confidence 99999999998877765 4799999999999999999999964 3579999999999999999854443322444
No 3
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=5.9e-56 Score=497.65 Aligned_cols=260 Identities=25% Similarity=0.485 Sum_probs=229.5
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
+++|++++.||+|+||.||+|.+..+|+.||||++.+... .......+.+|+.+|++|+|||||+++++|.+.+.+|||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiV 101 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM-SSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIV 101 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHC-CHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 5799999999999999999999999999999999987643 445567899999999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
||||+||+|.+++.......+++..++.|+.||+.||+|||++|||||||||+||||+.+|.+||+|||+|+.....
T Consensus 102 mEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~--- 178 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST--- 178 (350)
T ss_dssp EECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHH---
T ss_pred EeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCC---
Confidence 99999999999998776677899999999999999999999999999999999999999999999999999653210
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
.....+.+||+.|||||++.+..|+.++|||||||++|+|++|++||.+.+..+.+
T Consensus 179 ------------------------~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~ 234 (350)
T 4b9d_A 179 ------------------------VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLV 234 (350)
T ss_dssp ------------------------HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred ------------------------cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH
Confidence 01123568999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 908 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 908 ~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
.++..+.++ +....+|.++++||.+||+.||.+||| ++|+|+||||+.
T Consensus 235 ~~i~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~R~s----~~e~l~hp~~~~ 282 (350)
T 4b9d_A 235 LKIISGSFP-PVSLHYSYDLRSLVSQLFKRNPRDRPS----VNSILEKGFIAK 282 (350)
T ss_dssp HHHHHTCCC-CCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHTSHHHHT
T ss_pred HHHHcCCCC-CCCccCCHHHHHHHHHHccCChhHCcC----HHHHhcCHHhhc
Confidence 999988754 234468999999999999999999999 999999999986
No 4
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2.8e-55 Score=491.41 Aligned_cols=255 Identities=29% Similarity=0.462 Sum_probs=228.9
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
..|++++.||+|+||.||+|.++.+|+.||||++...... ....+.+|+.+|+.++|||||+++++|.+.+.+||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivm 150 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 150 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS---SGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh---HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 5799999999999999999999999999999999765332 2345788999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
|||+||+|.+++.+ ..+++..++.|+.||+.||+|||++|||||||||+||||+.+|.+||+|||+|+.....
T Consensus 151 Ey~~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~---- 223 (346)
T 4fih_A 151 EFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE---- 223 (346)
T ss_dssp CCCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSS----
T ss_pred eCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCC----
Confidence 99999999999976 34999999999999999999999999999999999999999999999999999654311
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.....+.+||+.|||||++.+..|+.++|||||||++|+|++|++||.+.+..+.+.
T Consensus 224 -----------------------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~ 280 (346)
T 4fih_A 224 -----------------------VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK 280 (346)
T ss_dssp -----------------------SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH
T ss_pred -----------------------CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHH
Confidence 112346799999999999999999999999999999999999999999999988888
Q ss_pred HHHhCCC-CCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 909 NILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 909 ~i~~~~~-~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
.+..... .++....+|.++++||.+||+.||.+||| ++|+|+||||+.
T Consensus 281 ~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~t----a~e~l~Hp~~~~ 329 (346)
T 4fih_A 281 MIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRAT----AAELLKHPFLAK 329 (346)
T ss_dssp HHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCC----HHHHTTCGGGGG
T ss_pred HHHcCCCCCCCccccCCHHHHHHHHHHcCCChhHCcC----HHHHhcCHhhcC
Confidence 8876543 34445568999999999999999999999 999999999986
No 5
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=6.4e-55 Score=474.88 Aligned_cols=261 Identities=31% Similarity=0.520 Sum_probs=217.7
Q ss_pred ccccccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 001869 661 DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (1002)
Q Consensus 661 ~~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (1002)
..|..+ ++|++++.||+|+||+||+|.+..+|+.||||++.+...........+.+|+.+|+.++|||||+++++|.+
T Consensus 7 ~~G~~i--g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~ 84 (275)
T 3hyh_A 7 ADGAHI--GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS 84 (275)
T ss_dssp ---------CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred CCCCEe--eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE
Confidence 344444 689999999999999999999999999999999988766566667789999999999999999999999999
Q ss_pred CCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcc
Q 001869 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
.+.+|+||||| +|+|.+++... +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+.
T Consensus 85 ~~~~~ivmEy~-~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~ 161 (275)
T 3hyh_A 85 KDEIIMVIEYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNI 161 (275)
T ss_dssp SSEEEEEEECC-CEEHHHHHHHS--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC--
T ss_pred CCEEEEEEeCC-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCee
Confidence 99999999999 78999999875 4599999999999999999999999999999999999999999999999999965
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCC-CChhhHHHHHHHHHHHHcCCCCCC
Q 001869 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFR 899 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-~~~sDIwSlGvil~elltG~~Pf~ 899 (1002)
.... ....+.+||+.|||||++.+..+ +.++|||||||++|+|++|+.||.
T Consensus 162 ~~~~----------------------------~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~ 213 (275)
T 3hyh_A 162 MTDG----------------------------NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213 (275)
T ss_dssp -----------------------------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred cCCC----------------------------CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCC
Confidence 3211 11235689999999999998876 579999999999999999999999
Q ss_pred CCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 900 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 900 ~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
+.+....+..+......+|. .+|+++++||.+||+.||++||| ++|+++||||+.
T Consensus 214 ~~~~~~~~~~i~~~~~~~p~--~~s~~~~~li~~~L~~dP~~R~s----~~eil~hpw~k~ 268 (275)
T 3hyh_A 214 DESIPVLFKNISNGVYTLPK--FLSPGAAGLIKRMLIVNPLNRIS----IHEIMQDDWFKV 268 (275)
T ss_dssp CSSHHHHHHHHHHTCCCCCT--TSCHHHHHHHHHHSCSSGGGSCC----HHHHHHCHHHHT
T ss_pred CCCHHHHHHHHHcCCCCCCC--CCCHHHHHHHHHHccCChhHCcC----HHHHHcCccccc
Confidence 99999999999988877765 47899999999999999999999 999999999974
No 6
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=5.4e-54 Score=492.58 Aligned_cols=255 Identities=29% Similarity=0.465 Sum_probs=229.6
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
+.|++++.||+|+||.||+|.++.+|+.||||++..... .....+.+|+.+|+.++|||||+++++|.+.+.+||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~---~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm 227 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 227 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC---SSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch---hHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEE
Confidence 579999999999999999999999999999999976532 23356788999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
|||+||+|.++++. ..+++..++.|+.||+.||+|||++|||||||||+||||+.+|.+||+|||+|+.....
T Consensus 228 Ey~~gG~L~~~i~~---~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~---- 300 (423)
T 4fie_A 228 EFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE---- 300 (423)
T ss_dssp ECCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSS----
T ss_pred eCCCCCcHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCC----
Confidence 99999999999976 34999999999999999999999999999999999999999999999999999654311
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 908 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~ 908 (1002)
.....+.+||+.|||||++.+..|+.++|||||||++|+|++|++||.+.+..+.+.
T Consensus 301 -----------------------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~ 357 (423)
T 4fie_A 301 -----------------------VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK 357 (423)
T ss_dssp -----------------------CCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH
T ss_pred -----------------------CccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHH
Confidence 112346799999999999999999999999999999999999999999999999888
Q ss_pred HHHhCCC-CCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 909 NILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 909 ~i~~~~~-~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
.+..... .++....+|.++++||.+||..||.+||| +.|||+||||+.
T Consensus 358 ~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~t----a~ell~Hp~~~~ 406 (423)
T 4fie_A 358 MIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRAT----AAELLKHPFLAK 406 (423)
T ss_dssp HHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCC----HHHHTTCGGGGG
T ss_pred HHHcCCCCCCcccccCCHHHHHHHHHHcCCChhHCcC----HHHHhcCHHhcC
Confidence 8877543 34455678999999999999999999999 999999999986
No 7
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=9.4e-53 Score=461.81 Aligned_cols=253 Identities=23% Similarity=0.378 Sum_probs=215.9
Q ss_pred cccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe----CCeEEE
Q 001869 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT----KTHVCL 746 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~----~~~~~l 746 (1002)
|++.+.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.+|++|+|||||+++++|.+ .+.+||
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~l 106 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEE
Confidence 4778889999999999999999999999999986533 44556789999999999999999999999875 456899
Q ss_pred EEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--cccCCCCCCCEEEcc-CCcEEEEeccCCcccCC
Q 001869 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~g--IiHrDLKP~NILl~~-~g~vkL~DFG~a~~~~~ 823 (1002)
|||||+||+|.+++.+. ..+++..++.|+.||+.||+|||++| ||||||||+|||++. +|.+||+|||+|+....
T Consensus 107 vmEy~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 107 VTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp EEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred EEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 99999999999999875 45999999999999999999999998 999999999999984 79999999999964221
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
....+.+|||.|||||++.+ .|+.++|||||||++|+|+||+.||.+...
T Consensus 185 -----------------------------~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~ 234 (290)
T 3fpq_A 185 -----------------------------SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN 234 (290)
T ss_dssp -----------------------------TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS
T ss_pred -----------------------------CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc
Confidence 12235789999999999875 589999999999999999999999987655
Q ss_pred HHHH-HHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 904 QKTF-ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 904 ~~~~-~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
...+ ..+.....+.......++++++||.+||+.||.+||| ++++|+||||+.
T Consensus 235 ~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s----~~e~l~Hp~~~~ 288 (290)
T 3fpq_A 235 AAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYS----IKDLLNHAFFQE 288 (290)
T ss_dssp HHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCC----HHHHHTSGGGC-
T ss_pred HHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCcC----HHHHhcCccccC
Confidence 4444 4444443332233456889999999999999999999 999999999985
No 8
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=7e-53 Score=503.72 Aligned_cols=287 Identities=32% Similarity=0.584 Sum_probs=243.4
Q ss_pred ccccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHH---HHHHHhCCCCCcceEEEEEE
Q 001869 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAE---REILDMLDHPFVPALYASFQ 739 (1002)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E---~~il~~l~hpnIv~l~~~~~ 739 (1002)
..++.+++|++++.||+|+||.||+|.++.+|+.||||++.+..+..........+| +.+++.++|||||+++++|.
T Consensus 183 ~~~~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~ 262 (689)
T 3v5w_A 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH 262 (689)
T ss_dssp TCCCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEE
T ss_pred CCCCchHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEE
Confidence 345677899999999999999999999999999999999987644333333444444 45566778999999999999
Q ss_pred eCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCc
Q 001869 740 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (1002)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~ 819 (1002)
+.+.+|||||||+||+|++++.+. +.+++..++.|+.||+.||+|||++|||||||||+||||+.+|++||+|||+|+
T Consensus 263 ~~~~lylVmEy~~GGdL~~~l~~~--~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~ 340 (689)
T 3v5w_A 263 TPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLAC 340 (689)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred ECCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceee
Confidence 999999999999999999999875 459999999999999999999999999999999999999999999999999996
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCccccccccc-CCCCCChhhHHHHHHHHHHHHcCCCCC
Q 001869 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-GAGHTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-~~~~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
..... ...+.+||+.|||||++. +..|+.++|||||||++|+|++|.+||
T Consensus 341 ~~~~~-----------------------------~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF 391 (689)
T 3v5w_A 341 DFSKK-----------------------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391 (689)
T ss_dssp ECSSC-----------------------------CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred ecCCC-----------------------------CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 54311 123578999999999996 467999999999999999999999999
Q ss_pred CCC---ChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhccCCCCC
Q 001869 899 RGK---TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPEL 974 (1002)
Q Consensus 899 ~~~---~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~~~~~ 974 (1002)
.+. +....+..+....+.+|. .+|+++++||.+||+.||.+|+++. ..+++|++||||++++|..+.....+..
T Consensus 392 ~~~~~~~~~~i~~~i~~~~~~~p~--~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~idW~~l~~~~~~pP 469 (689)
T 3v5w_A 392 RQHKTKDKHEIDRMTLTMAVELPD--SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPP 469 (689)
T ss_dssp CGGGCCCHHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCCHHHHHTTCSCCS
T ss_pred CCCChHHHHHHHHhhcCCCCCCCc--cCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCCCHHHHHcCCCCcC
Confidence 763 445566777777777665 4799999999999999999999863 4689999999999999999965554444
Q ss_pred CCCCCCCc
Q 001869 975 DAPLFATD 982 (1002)
Q Consensus 975 ~~p~~~~~ 982 (1002)
.+|.....
T Consensus 470 ~~P~~~~~ 477 (689)
T 3v5w_A 470 LIPPRGEV 477 (689)
T ss_dssp CCCCTTCS
T ss_pred ccCCCCCC
Confidence 67765443
No 9
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=9.8e-53 Score=469.46 Aligned_cols=259 Identities=24% Similarity=0.352 Sum_probs=222.5
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (1002)
..+.|++.++||+|+||.||+|.++.+|+.||||+++.... ..+|+.+|+.++|||||+++++|.+++.+||
T Consensus 56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~--------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~i 127 (336)
T 4g3f_A 56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF--------RVEELVACAGLSSPRIVPLYGAVREGPWVNI 127 (336)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEE
T ss_pred chhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh--------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 34679999999999999999999999999999999986532 2369999999999999999999999999999
Q ss_pred EEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCC-cEEEEeccCCcccCCCC
Q 001869 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g-~vkL~DFG~a~~~~~~~ 825 (1002)
|||||+||+|.++++.. +.+++..++.|+.||+.||+|||++|||||||||+||||+.+| ++||+|||+|+......
T Consensus 128 vmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~ 205 (336)
T 4g3f_A 128 FMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG 205 (336)
T ss_dssp EECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC----
T ss_pred EEeccCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCC
Confidence 99999999999999875 4599999999999999999999999999999999999999887 69999999997653221
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
.. ........++||+.|||||++.+..|+.++|||||||++|+|++|++||.+.+...
T Consensus 206 ~~----------------------~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~ 263 (336)
T 4g3f_A 206 LG----------------------KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP 263 (336)
T ss_dssp ------------------------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC
T ss_pred cc----------------------cceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH
Confidence 10 01112345789999999999999999999999999999999999999999988877
Q ss_pred HHHHHHhCCCCCC-CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHH-------------HcCCCcCCC
Q 001869 906 TFANILHKDLKFP-SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI-------------KKHPFFKGV 961 (1002)
Q Consensus 906 ~~~~i~~~~~~~~-~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~el-------------L~Hp~f~~~ 961 (1002)
.+.++.....+++ ....+++++++||.+||++||.+||| +.|| |+|||+...
T Consensus 264 ~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s----a~el~~~l~~~l~~~~~l~hPw~~~~ 329 (336)
T 4g3f_A 264 LCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRAS----AMELRRKVGKALQEVGGLKSPWKGEY 329 (336)
T ss_dssp CHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHHHHHHHHHHTTSSCSCSSSSC
T ss_pred HHHHHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHCcC----HHHHHHHHHHHHhhhhhccCCCcCCC
Confidence 8888888765543 23468999999999999999999999 6665 679998863
No 10
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.7e-51 Score=471.04 Aligned_cols=264 Identities=25% Similarity=0.383 Sum_probs=223.6
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe------CC
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------KT 742 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------~~ 742 (1002)
++|++++.||+|+||+||+|.+..+|+.||||++++.. ........+.+|+.+|+.|+|||||++++++.. .+
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~-~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF-DVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTT-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccc-cchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 57999999999999999999999999999999997653 344556788899999999999999999999764 36
Q ss_pred eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccC
Q 001869 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
.+||||||| +|+|.+++... +.+++..++.|+.||+.||+|||++|||||||||+|||++.+|.+||+|||+|+...
T Consensus 133 ~~~ivmE~~-~g~L~~~i~~~--~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~ 209 (398)
T 4b99_A 133 SVYVVLDLM-ESDLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLC 209 (398)
T ss_dssp CEEEEEECC-SEEHHHHHTSS--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred EEEEEEeCC-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecc
Confidence 799999999 57899999764 569999999999999999999999999999999999999999999999999997543
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
.... .......+.+||+.|||||++.+. .++.++||||+||++|+|++|++||.+.
T Consensus 210 ~~~~-----------------------~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~ 266 (398)
T 4b99_A 210 TSPA-----------------------EHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK 266 (398)
T ss_dssp -----------------------------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCS
T ss_pred cCcc-----------------------ccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCC
Confidence 2110 011223467999999999998875 5688999999999999999999999999
Q ss_pred ChHHHHHHHHhCCCCC--------------------CC---------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHH
Q 001869 902 TRQKTFANILHKDLKF--------------------PS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 952 (1002)
Q Consensus 902 ~~~~~~~~i~~~~~~~--------------------~~---------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~el 952 (1002)
+..+.+..|....... +. ....+.++++||.+||.+||.+||| ++|+
T Consensus 267 ~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t----a~e~ 342 (398)
T 4b99_A 267 NYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARIS----AAAA 342 (398)
T ss_dssp SHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCC----HHHH
T ss_pred CHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcC----HHHH
Confidence 9988888876431111 10 1246889999999999999999999 9999
Q ss_pred HcCCCcCCCCh
Q 001869 953 KKHPFFKGVNW 963 (1002)
Q Consensus 953 L~Hp~f~~~~~ 963 (1002)
|+||||+....
T Consensus 343 L~Hp~f~~~~~ 353 (398)
T 4b99_A 343 LRHPFLAKYHD 353 (398)
T ss_dssp TTSGGGTTTCC
T ss_pred hcCHhhCcCCC
Confidence 99999998643
No 11
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=3.7e-51 Score=452.86 Aligned_cols=271 Identities=23% Similarity=0.374 Sum_probs=203.9
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC------
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT------ 742 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~------ 742 (1002)
++|++++.||+|+||+||+|.++.+|+.||||+++... .......+.+|+.+|++|+|||||+++++|.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~ 82 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQ 82 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccc
Confidence 46999999999999999999999999999999997542 3445577899999999999999999999997544
Q ss_pred ------eEEEEEecCCCCcHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEec
Q 001869 743 ------HVCLITDYCPGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 815 (1002)
Q Consensus 743 ------~~~lV~E~~~ggsL~~~l~~~~~-~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DF 815 (1002)
++|+|||||+||+|.+++..... ...+...++.++.||+.||+|||++|||||||||+|||++.+|.+||+||
T Consensus 83 ~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DF 162 (299)
T 4g31_A 83 PSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDF 162 (299)
T ss_dssp ----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC
T ss_pred ccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccC
Confidence 47999999999999999976422 23456678899999999999999999999999999999999999999999
Q ss_pred cCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCC
Q 001869 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGY 895 (1002)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~ 895 (1002)
|+|+........... ...........+.+||+.|||||++.+..|+.++|||||||++|||++
T Consensus 163 Gla~~~~~~~~~~~~---------------~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~-- 225 (299)
T 4g31_A 163 GLVTAMDQDEEEQTV---------------LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY-- 225 (299)
T ss_dssp CCC-----------------------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS--
T ss_pred ccceecCCCcccccc---------------ccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc--
Confidence 999765432111000 000011122345789999999999999999999999999999999996
Q ss_pred CCCCCCChH-HHHHHHHhCCCCCCC-CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhh
Q 001869 896 TPFRGKTRQ-KTFANILHKDLKFPS-STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWAL 965 (1002)
Q Consensus 896 ~Pf~~~~~~-~~~~~i~~~~~~~~~-~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~ 965 (1002)
||.+.... ..+..+... .+|. ....++.+.+||.+||+.||.+||| +.++|+||||++++|..
T Consensus 226 -Pf~~~~~~~~~~~~~~~~--~~p~~~~~~~~~~~~li~~~L~~dP~~Rps----~~eil~h~~~~~~~~p~ 290 (299)
T 4g31_A 226 -PFSTQMERVRTLTDVRNL--KFPPLFTQKYPCEYVMVQDMLSPSPMERPE----AINIIENAVFEDLDFPG 290 (299)
T ss_dssp -CCSSHHHHHHHHHHHHTT--CCCHHHHHHCHHHHHHHHHHTCSSGGGSCC----HHHHHTSGGGCCC----
T ss_pred -CCCCccHHHHHHHHHhcC--CCCCCCcccCHHHHHHHHHHcCCChhHCcC----HHHHhcCHhhCCCCCCC
Confidence 78653322 223333332 2222 1234567889999999999999999 99999999999998853
No 12
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-49 Score=439.60 Aligned_cols=266 Identities=20% Similarity=0.271 Sum_probs=218.0
Q ss_pred cccccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001869 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
..|.+..++|++.+.||+|+||+||+|.+.. .+|||+++.. .........+.+|+.+|++++|||||++++++..
T Consensus 29 ~~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~-~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~- 103 (307)
T 3omv_A 29 YYWEIEASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVV-DPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK- 103 (307)
T ss_dssp CCCBCCTTSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCS-SCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-
T ss_pred cCcEEcHHHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEec-CCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-
Confidence 4567888999999999999999999998643 5899998754 2345667889999999999999999999998754
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
+.+|||||||+||+|.+++... ...+++..+..|+.||+.||+|||+++||||||||+|||++.++.+||+|||+|+..
T Consensus 104 ~~~~iVmEy~~gGsL~~~l~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 182 (307)
T 3omv_A 104 DNLAIVTQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVK 182 (307)
T ss_dssp SSCEEEEECCSSCBHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-
T ss_pred CeEEEEEEcCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceec
Confidence 5689999999999999999764 346999999999999999999999999999999999999999999999999999654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC---CCCCChhhHHHHHHHHHHHHcCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~---~~~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
.... ........+||+.|||||++.+ ..|+.++|||||||+||||+||+.||
T Consensus 183 ~~~~-------------------------~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf 237 (307)
T 3omv_A 183 SRWS-------------------------GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPY 237 (307)
T ss_dssp ------------------------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred ccCC-------------------------cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCC
Confidence 3110 0112345689999999999964 35888999999999999999999999
Q ss_pred CCCChHHHHHHHHhCCCCCCC----CCCCCHHHHHHHHHccccCcCCCCCChhcHH--HHHcCCCc
Q 001869 899 RGKTRQKTFANILHKDLKFPS----STPTSLHAKQLMYRLLHRDPKSRLGSHEGAN--EIKKHPFF 958 (1002)
Q Consensus 899 ~~~~~~~~~~~i~~~~~~~~~----~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~--elL~Hp~f 958 (1002)
.+.+....+..++......|. ...++..+.+||.+||+.||.+|||+.+.++ ++|+|++-
T Consensus 238 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp 303 (307)
T 3omv_A 238 SHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp TTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred CCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence 987777666666655444332 2457889999999999999999999665443 45677763
No 13
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.3e-49 Score=452.26 Aligned_cols=281 Identities=26% Similarity=0.369 Sum_probs=212.1
Q ss_pred cCCcccccccccCCcEEEEEEEEc---CCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCe
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 743 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 743 (1002)
.+.|++++.||+|+||+||+|.++ .+++.||||.+.+.. ...++.+|+.+|+.+ +||||++++++|.+.++
T Consensus 20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~ 94 (361)
T 4f9c_A 20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-----HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH 94 (361)
T ss_dssp GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-----CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence 368999999999999999999985 468899999886542 235678899999998 69999999999999999
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccC-CcEEEEeccCCcccC
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLTS 822 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~-g~vkL~DFG~a~~~~ 822 (1002)
+|+|||||+||+|.++++. +++..++.++.||+.||+|||++||+||||||+|||++.+ +.+||+|||+|+...
T Consensus 95 ~~lvmE~~~g~~L~~~~~~-----l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~ 169 (361)
T 4f9c_A 95 VVIAMPYLEHESFLDILNS-----LSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTH 169 (361)
T ss_dssp EEEEEECCCCCCHHHHHTT-----CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECT
T ss_pred EEEEEeCCCcccHHHHHcC-----CCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccC
Confidence 9999999999999999843 8999999999999999999999999999999999999876 899999999997654
Q ss_pred CCCCCCCCcchhhhhcc-cCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001869 823 CKPQLLLPTTNEKKRRH-KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
................. .................+.+||+.|||||++.+. .|+.++||||+||++|+|++|+.||.+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~ 249 (361)
T 4f9c_A 170 DTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYK 249 (361)
T ss_dssp TCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred CccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCC
Confidence 32211100000000000 0000000011112233457899999999999875 488999999999999999999999955
Q ss_pred -CChHHHHHHHHhC--------------------------------------C--------------CCCCCCCCCCHHH
Q 001869 901 -KTRQKTFANILHK--------------------------------------D--------------LKFPSSTPTSLHA 927 (1002)
Q Consensus 901 -~~~~~~~~~i~~~--------------------------------------~--------------~~~~~~~~~s~~~ 927 (1002)
.+..+.+..|..- . .....+..+|.++
T Consensus 250 ~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a 329 (361)
T 4f9c_A 250 ASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEA 329 (361)
T ss_dssp CSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHH
T ss_pred CCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHH
Confidence 4444444443220 0 0111234578899
Q ss_pred HHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCC
Q 001869 928 KQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 928 ~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 962 (1002)
++||.+||++||.+||| ++|+|+||||++++
T Consensus 330 ~DLl~~lL~~dP~~R~t----a~eaL~Hp~f~~i~ 360 (361)
T 4f9c_A 330 YDLLDKLLDLNPASRIT----AEEALLHPFFKDMS 360 (361)
T ss_dssp HHHHHHHTCSCTTTSCC----HHHHHTSGGGTTC-
T ss_pred HHHHHHHCcCChhHCcC----HHHHhcCcccCCCC
Confidence 99999999999999999 99999999999864
No 14
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.9e-49 Score=438.53 Aligned_cols=260 Identities=22% Similarity=0.354 Sum_probs=221.0
Q ss_pred ccccCCcccccccccCCcEEEEEEEEc-----CCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 739 (1002)
.|..++|.+.+.||+|+||.||+|.+. .++..||||+++.. .......+.+|+.+|++++|||||++++++.
T Consensus 9 ~I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~ 85 (299)
T 4asz_A 9 HIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQHEHIVKFYGVCV 85 (299)
T ss_dssp BCCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred ccCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC---ChHHHHHHHHHHHHHHhCCCCCCccEEEEEe
Confidence 466778999999999999999999874 35889999999754 3455678999999999999999999999999
Q ss_pred eCCeEEEEEecCCCCcHHHHHhhC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCC
Q 001869 740 TKTHVCLITDYCPGGELFLLLDRQ-----------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 808 (1002)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~-----------~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g 808 (1002)
+++.+|||||||++|+|.+++... ....+++..+..++.||+.||+|||+++||||||||+|||++.++
T Consensus 86 ~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~ 165 (299)
T 4asz_A 86 EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENL 165 (299)
T ss_dssp SSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred eCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCC
Confidence 999999999999999999999753 234699999999999999999999999999999999999999999
Q ss_pred cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHH
Q 001869 809 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 888 (1002)
Q Consensus 809 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil 888 (1002)
.+||+|||+|+...... ........+||+.|||||++.+..|+.++|||||||++
T Consensus 166 ~~Ki~DFGla~~~~~~~-------------------------~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl 220 (299)
T 4asz_A 166 LVKIGDFGMSRDVYSTD-------------------------YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVL 220 (299)
T ss_dssp CEEECCCSCHHHHTGGG-------------------------CEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred cEEECCcccceecCCCC-------------------------ceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHH
Confidence 99999999996532110 01122345799999999999999999999999999999
Q ss_pred HHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcC
Q 001869 889 YEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 959 (1002)
Q Consensus 889 ~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 959 (1002)
|||+| |+.||.+.+..+.+..+..+.. .+.+..++.++.+||.+||+.||++||| +.++ |+|++
T Consensus 221 ~Ellt~G~~Pf~~~~~~~~~~~i~~~~~-~~~p~~~~~~~~~li~~cl~~dP~~RPs----~~~i--~~~L~ 285 (299)
T 4asz_A 221 WEIFTYGKQPWYQLSNNEVIECITQGRV-LQRPRTCPQEVYELMLGCWQREPHMRKN----IKGI--HTLLQ 285 (299)
T ss_dssp HHHHTTTCCTTTTSCHHHHHHHHHHTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHH--HHHHH
T ss_pred HHHHcCCCCCCCCCCHHHHHHHHHcCCC-CCCCccchHHHHHHHHHHcCCChhHCcC----HHHH--HHHHH
Confidence 99998 9999999999988888887653 2333457899999999999999999999 6666 44554
No 15
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=3.3e-49 Score=475.51 Aligned_cols=263 Identities=28% Similarity=0.461 Sum_probs=236.0
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
+++|++++.||+|+||.||+|.++.+|+.||+|++... .......+.+|+.+|+.|+|||||+++++|.+.+.+|||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~---~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv 232 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP---HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMI 232 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEecc---chhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 46899999999999999999999999999999999764 334456788999999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccC--CcEEEEeccCCcccCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN--GHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~--g~vkL~DFG~a~~~~~~~ 825 (1002)
||||+||+|++++... ...+++..++.|+.||+.||+|||++||+||||||+|||++.+ |.+||+|||+|+.....
T Consensus 233 ~E~~~gg~L~~~i~~~-~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~- 310 (573)
T 3uto_A 233 YEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK- 310 (573)
T ss_dssp EECCCCCBHHHHHTCT-TSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT-
T ss_pred EeecCCCcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCC-
Confidence 9999999999999653 3469999999999999999999999999999999999999854 89999999999764321
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
......+||+.|||||++.+..|+.++|||||||++|+|++|.+||.+.+..+
T Consensus 311 ---------------------------~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~ 363 (573)
T 3uto_A 311 ---------------------------QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE 363 (573)
T ss_dssp ---------------------------SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH
T ss_pred ---------------------------CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH
Confidence 12235689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCC--CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhh
Q 001869 906 TFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 966 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~--~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~ 966 (1002)
.+..+......++.. ..+|.++++||.+||+.||.+||| +.|+|+||||+..+|...
T Consensus 364 ~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t----~~e~l~Hpw~~~~~~~~~ 422 (573)
T 3uto_A 364 TLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMT----IHQALEHPWLTPGNAPGR 422 (573)
T ss_dssp HHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCC----HHHHHHSTTTSCCCCTTT
T ss_pred HHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcC----HHHHhcCcCcCCCCCCCc
Confidence 999999887666543 568999999999999999999999 999999999999877643
No 16
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=9.2e-49 Score=438.96 Aligned_cols=257 Identities=20% Similarity=0.300 Sum_probs=214.5
Q ss_pred ccccCCcccccccccCCcEEEEEEEEc-----CCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 739 (1002)
.+...+|.+.+.||+|+||.||+|.+. .+++.||||+++.. .......+.+|+.+|++++|||||++++++.
T Consensus 37 ~i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~ 113 (329)
T 4aoj_A 37 HIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTMLQHQHIVRFFGVCT 113 (329)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC---SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred ccCHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 455678999999999999999999874 36889999999753 4556678999999999999999999999999
Q ss_pred eCCeEEEEEecCCCCcHHHHHhhCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEcc
Q 001869 740 TKTHVCLITDYCPGGELFLLLDRQP-------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG 806 (1002)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~~-------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~ 806 (1002)
+.+.+|||||||++|+|.+++.... ...+++..+..|+.||+.||+|||+++||||||||+|||++.
T Consensus 114 ~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~ 193 (329)
T 4aoj_A 114 EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQ 193 (329)
T ss_dssp SSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEET
T ss_pred ECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECC
Confidence 9999999999999999999997532 245899999999999999999999999999999999999999
Q ss_pred CCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHH
Q 001869 807 NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGI 886 (1002)
Q Consensus 807 ~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGv 886 (1002)
++.+||+|||+|+...... ........+||+.|||||++.+..++.++|||||||
T Consensus 194 ~~~~Ki~DFGla~~~~~~~-------------------------~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gv 248 (329)
T 4aoj_A 194 GLVVKIGDFGMSRDIYSTD-------------------------YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGV 248 (329)
T ss_dssp TTEEEECCCC-----------------------------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHH
T ss_pred CCcEEEcccccceeccCCC-------------------------cceecCcccccccccChhhhcCCCCCccccccchHH
Confidence 9999999999996543111 011223467999999999999999999999999999
Q ss_pred HHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 887 LLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 887 il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
++|||+| |+.||.+.+..+.+..+..+. ..+.+..+++++.+||.+||+.||++||| +.+|++
T Consensus 249 vl~Ellt~G~~Pf~~~~~~~~~~~i~~g~-~~~~p~~~~~~~~~li~~cl~~dP~~RPs----~~ei~~ 312 (329)
T 4aoj_A 249 VLWEIFTYGKQPWYQLSNTEAIDCITQGR-ELERPRACPPEVYAIMRGCWQREPQQRHS----IKDVHA 312 (329)
T ss_dssp HHHHHHTTSCCTTCSSCHHHHHHHHHHTC-CCCCCTTCCHHHHHHHHHHCCSSTTTSCC----HHHHHH
T ss_pred HHHHHHcCCCCCCCCCCHHHHHHHHHcCC-CCCCcccccHHHHHHHHHHcCcChhHCcC----HHHHHH
Confidence 9999998 999999999988888887653 23334468999999999999999999999 566654
No 17
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.1e-48 Score=434.38 Aligned_cols=256 Identities=21% Similarity=0.320 Sum_probs=217.0
Q ss_pred ccccCCcccccccccCCcEEEEEEEEc-----CCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 739 (1002)
.+....+++++.||+|+||.||+|... .+++.||||+++... .......+.+|+.+|++++|||||++++++.
T Consensus 22 ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~--~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~ 99 (308)
T 4gt4_A 22 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA--EGPLREEFRHEAMLRARLQHPNVVCLLGVVT 99 (308)
T ss_dssp BCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C--CC-CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc--ChHHHHHHHHHHHHHHhCCCCCCCCcceEEE
Confidence 456678999999999999999999863 467899999997542 3334578999999999999999999999999
Q ss_pred eCCeEEEEEecCCCCcHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEc
Q 001869 740 TKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ 805 (1002)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~ 805 (1002)
+.+.+|||||||++|+|.++|.... ...+++..+..++.||+.||+|||+++||||||||+|||++
T Consensus 100 ~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~ 179 (308)
T 4gt4_A 100 KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVY 179 (308)
T ss_dssp SSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred ECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEEC
Confidence 9999999999999999999996532 23589999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHH
Q 001869 806 GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALG 885 (1002)
Q Consensus 806 ~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlG 885 (1002)
.++.+||+|||+|+..... .........+||+.|||||++.+..|+.++||||||
T Consensus 180 ~~~~~Ki~DFGlar~~~~~-------------------------~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfG 234 (308)
T 4gt4_A 180 DKLNVKISDLGLFREVYAA-------------------------DYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYG 234 (308)
T ss_dssp GGGCEEECCSCCBCGGGGG-------------------------GCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred CCCCEEECCcccceeccCC-------------------------CceeEecccccCCcccCHHHHhCCCCCccchhhhHH
Confidence 9999999999999654211 011223456899999999999999999999999999
Q ss_pred HHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhc
Q 001869 886 ILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 886 vil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
|+||||+| |..||.+.+..+.+..+..+. ..+.+..++.++.+|+.+||+.||.+|||+.+.
T Consensus 235 vvl~El~t~g~~Pf~~~~~~~~~~~i~~~~-~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei 297 (308)
T 4gt4_A 235 VVLWEVFSYGLQPYCGYSNQDVVEMIRNRQ-VLPCPDDCPAWVYALMIECWNEFPSRRPRFKDI 297 (308)
T ss_dssp HHHHHHHTTTCCTTTTCCHHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCCCcccchHHHHHHHHHHcCCChhHCcCHHHH
Confidence 99999998 999999999888887776654 334445689999999999999999999994443
No 18
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2.6e-48 Score=441.77 Aligned_cols=287 Identities=36% Similarity=0.702 Sum_probs=244.6
Q ss_pred cccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCC
Q 001869 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT 742 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~ 742 (1002)
..+..++|++++.||+|+||.||+|.+..+++.||||++++...........+..|..+++.+ +||||+++++++.+.+
T Consensus 18 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~ 97 (353)
T 3txo_A 18 NRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPD 97 (353)
T ss_dssp -----CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred CCCchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCC
Confidence 346678999999999999999999999999999999999876544555667788899999988 7999999999999999
Q ss_pred eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccC
Q 001869 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
.+|+|||||.||+|..++... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+++...
T Consensus 98 ~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~ 175 (353)
T 3txo_A 98 RLFFVMEFVNGGDLMFHIQKS--RRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 175 (353)
T ss_dssp EEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecc
Confidence 999999999999999999875 459999999999999999999999999999999999999999999999999985422
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
.. .......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+
T Consensus 176 ~~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~ 228 (353)
T 3txo_A 176 CN---------------------------GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN 228 (353)
T ss_dssp C------------------------------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cC---------------------------CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCC
Confidence 11 112345689999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh--hcHHHHHcCCCcCCCChhhhhccCCCCCCCCCCC
Q 001869 903 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH--EGANEIKKHPFFKGVNWALVRCMNPPELDAPLFA 980 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~--~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~ 980 (1002)
..+.+..+......+|.. ++..+.+||.+||+.||.+||++. ..++++++||||++++|..+.....+....|.+.
T Consensus 229 ~~~~~~~i~~~~~~~p~~--~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~~w~~l~~~~~~~p~~p~~~ 306 (353)
T 3txo_A 229 EDDLFEAILNDEVVYPTW--LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNHRQIEPPFRPRIK 306 (353)
T ss_dssp HHHHHHHHHHCCCCCCTT--SCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCC
T ss_pred HHHHHHHHHcCCCCCCCC--CCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCCCHHHHhcCcCCCCccCCCC
Confidence 999999999988877754 788999999999999999999952 3348999999999999999855444334567654
Q ss_pred C
Q 001869 981 T 981 (1002)
Q Consensus 981 ~ 981 (1002)
.
T Consensus 307 ~ 307 (353)
T 3txo_A 307 S 307 (353)
T ss_dssp S
T ss_pred C
Confidence 3
No 19
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1e-47 Score=434.16 Aligned_cols=284 Identities=39% Similarity=0.729 Sum_probs=246.0
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
+..++|++++.||+|+||.||+|.+..+++.||||++++...........+.+|+.+++.++||||+++++++.+.+.+|
T Consensus 2 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 81 (337)
T 1o6l_A 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLC 81 (337)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEE
T ss_pred CChHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEE
Confidence 34679999999999999999999999999999999998764434445677889999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+||||++||+|..++... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||++......
T Consensus 82 lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~- 158 (337)
T 1o6l_A 82 FVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD- 158 (337)
T ss_dssp EEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT-
T ss_pred EEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccC-
Confidence 999999999999999764 45999999999999999999999999999999999999999999999999998542111
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+...
T Consensus 159 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~ 212 (337)
T 1o6l_A 159 --------------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER 212 (337)
T ss_dssp --------------------------TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred --------------------------CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHH
Confidence 112335689999999999999999999999999999999999999999999989
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhccCCCCCCCCCCC
Q 001869 906 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPLFA 980 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~ 980 (1002)
.+..+......+|. .++.++++||.+||+.||.+||+.. ..++++++||||++++|..+.....+....|...
T Consensus 213 ~~~~i~~~~~~~p~--~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~~~~~~~~~~~~pp~~p~~~ 286 (337)
T 1o6l_A 213 LFELILMEEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVT 286 (337)
T ss_dssp HHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCS
T ss_pred HHHHHHcCCCCCCC--CCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCCCCCCC
Confidence 88999888777765 4789999999999999999999321 1299999999999999998844332222455543
No 20
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.9e-47 Score=440.25 Aligned_cols=288 Identities=36% Similarity=0.703 Sum_probs=244.8
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCe
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 743 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 743 (1002)
.+..++|++++.||+|+||.||+|.+..+++.||||++++...........+..|..++.++ +||||++++++|.+.+.
T Consensus 48 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~ 127 (396)
T 4dc2_A 48 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR 127 (396)
T ss_dssp -CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCE
Confidence 35677999999999999999999999999999999999987655555666788899999877 89999999999999999
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCC
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
+|+|||||+||+|..++... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+++....
T Consensus 128 ~~lV~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 128 LFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEEEcCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 99999999999999999875 4599999999999999999999999999999999999999999999999999854211
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC--
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK-- 901 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~-- 901 (1002)
........+||+.|+|||++.+..++.++|||||||++|+|++|..||...
T Consensus 206 ---------------------------~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~ 258 (396)
T 4dc2_A 206 ---------------------------PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGS 258 (396)
T ss_dssp ---------------------------TTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC
T ss_pred ---------------------------CCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccc
Confidence 112234578999999999999999999999999999999999999999642
Q ss_pred -------ChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh--hcHHHHHcCCCcCCCChhhhhccCCC
Q 001869 902 -------TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH--EGANEIKKHPFFKGVNWALVRCMNPP 972 (1002)
Q Consensus 902 -------~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~--~~a~elL~Hp~f~~~~~~~~~~~~~~ 972 (1002)
.....+..+....+.+|.. ++.++++||++||+.||.+||++. ..++++++||||++++|..+.....+
T Consensus 259 ~~~~~~~~~~~~~~~i~~~~~~~p~~--~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i~w~~l~~~~~~ 336 (396)
T 4dc2_A 259 SDNPDQNTEDYLFQVILEKQIRIPRS--LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVV 336 (396)
T ss_dssp ------CCHHHHHHHHHHCCCCCCTT--SCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTCCHHHHHTTCSC
T ss_pred ccccchhhHHHHHHHHhccccCCCCc--CCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCCCHHHHHcCCCC
Confidence 2344566777777777654 789999999999999999999964 35799999999999999998655544
Q ss_pred CCCCCCCCCcc
Q 001869 973 ELDAPLFATDT 983 (1002)
Q Consensus 973 ~~~~p~~~~~~ 983 (1002)
....|..+...
T Consensus 337 pp~~p~~~~~~ 347 (396)
T 4dc2_A 337 PPFKPNISGEF 347 (396)
T ss_dssp CSCCCCCCSST
T ss_pred CCCcCCCCCcc
Confidence 44667765543
No 21
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=3.8e-48 Score=437.48 Aligned_cols=261 Identities=24% Similarity=0.360 Sum_probs=219.6
Q ss_pred cccccCCcccccccccCCcEEEEEEEEcCC-----CeEEEEEEeecccccChhHHHHHHHHHHHHHhCCC-CCcceEEEE
Q 001869 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH-PFVPALYAS 737 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h-pnIv~l~~~ 737 (1002)
|++..++|++.+.||+|+||.||+|.+..+ ++.||||.+.... .......+.+|+.+|.+++| ||||+++++
T Consensus 59 wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~--~~~~~~~~~~E~~il~~l~hhpnIV~l~g~ 136 (353)
T 4ase_A 59 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGA 136 (353)
T ss_dssp HBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc--ChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence 567788999999999999999999998654 4689999987643 34456788999999999965 999999999
Q ss_pred EEe-CCeEEEEEecCCCCcHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCE
Q 001869 738 FQT-KTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 802 (1002)
Q Consensus 738 ~~~-~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NI 802 (1002)
+.. ++.+|||||||++|+|.++|+... ...+++..+..|+.||+.||+|||+++||||||||+||
T Consensus 137 ~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NI 216 (353)
T 4ase_A 137 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 216 (353)
T ss_dssp ECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred EEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccce
Confidence 865 567899999999999999997532 24589999999999999999999999999999999999
Q ss_pred EEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHH
Q 001869 803 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 882 (1002)
Q Consensus 803 Ll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIw 882 (1002)
|++.++.+||+|||+|+....... .......+||+.|||||++.+..|+.++|||
T Consensus 217 Ll~~~~~vKi~DFGlar~~~~~~~-------------------------~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVw 271 (353)
T 4ase_A 217 LLSEKNVVKICDFGLARDIYKDPD-------------------------YVRKGDARLPLKWMAPETIFDRVYTIQSDVW 271 (353)
T ss_dssp EECGGGCEEECCCGGGSCTTTCTT-------------------------SEEETTEEECGGGCCHHHHHHCCCCHHHHHH
T ss_pred eeCCCCCEEECcchhhhhcccCCC-------------------------ceeeccccccccccCHHHHhcCCCCCcccEe
Confidence 999999999999999975432110 1123456899999999999999999999999
Q ss_pred HHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 883 ALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 883 SlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
||||++|||+| |..||.+.+..+.+...+......+.+..+++++.+||.+||+.||.+||| +.+|++|
T Consensus 272 S~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt----~~eil~~ 341 (353)
T 4ase_A 272 SFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT----FSELVEH 341 (353)
T ss_dssp HHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred ehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcC----HHHHHHH
Confidence 99999999998 999999876555555555544444455568999999999999999999999 7777776
No 22
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.1e-46 Score=427.30 Aligned_cols=286 Identities=36% Similarity=0.698 Sum_probs=246.4
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCe
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 743 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 743 (1002)
.+..++|++++.||+|+||.||+|.+..+++.||||++.+...........+.+|+.+++.+ +||||+++++++.+.+.
T Consensus 5 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~ 84 (345)
T 3a8x_A 5 PLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR 84 (345)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred CCchhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCE
Confidence 35567999999999999999999999999999999999987666677778889999999988 89999999999999999
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCC
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
+|+||||++||+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||++.....
T Consensus 85 ~~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~ 162 (345)
T 3a8x_A 85 LFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 162 (345)
T ss_dssp EEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCC
T ss_pred EEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccC
Confidence 99999999999999999864 4599999999999999999999999999999999999999999999999999854211
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC---
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG--- 900 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~--- 900 (1002)
. .......+||+.|+|||++.+..++.++|||||||++|+|++|..||..
T Consensus 163 ~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 215 (345)
T 3a8x_A 163 P---------------------------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGS 215 (345)
T ss_dssp T---------------------------TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC
T ss_pred C---------------------------CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCccc
Confidence 0 1123456899999999999999999999999999999999999999965
Q ss_pred ------CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh--hcHHHHHcCCCcCCCChhhhhccCCC
Q 001869 901 ------KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH--EGANEIKKHPFFKGVNWALVRCMNPP 972 (1002)
Q Consensus 901 ------~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~--~~a~elL~Hp~f~~~~~~~~~~~~~~ 972 (1002)
......+..+......+|. .++..+++||.+||+.||.+||++. ..+.++++||||++++|..+.....+
T Consensus 216 ~~~~~~~~~~~~~~~i~~~~~~~p~--~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~~w~~~~~~~~~ 293 (345)
T 3a8x_A 216 SDNPDQNTEDYLFQVILEKQIRIPR--SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVV 293 (345)
T ss_dssp -------CHHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTCCHHHHHTTCSC
T ss_pred ccccccccHHHHHHHHHcCCCCCCC--CCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCCCHHHHHhCCCC
Confidence 3344556677777776664 4789999999999999999999963 34689999999999999988554443
Q ss_pred CCCCCCCCC
Q 001869 973 ELDAPLFAT 981 (1002)
Q Consensus 973 ~~~~p~~~~ 981 (1002)
....|.++.
T Consensus 294 ~p~~p~~~~ 302 (345)
T 3a8x_A 294 PPFKPNISG 302 (345)
T ss_dssp CSCCCCCCT
T ss_pred CCcCCCCCC
Confidence 335666554
No 23
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.8e-47 Score=437.89 Aligned_cols=287 Identities=37% Similarity=0.649 Sum_probs=241.7
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHH-HHhCCCCCcceEEEEEEeCCe
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREI-LDMLDHPFVPALYASFQTKTH 743 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~i-l~~l~hpnIv~l~~~~~~~~~ 743 (1002)
.+..++|++++.||+|+||.||+|.+..+++.||||++.+...........+..|..+ ++.++||||++++++|.+.+.
T Consensus 34 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~ 113 (373)
T 2r5t_A 34 HAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADK 113 (373)
T ss_dssp TCCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSE
T ss_pred CCChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCE
Confidence 3556799999999999999999999999999999999988765555556667777776 567899999999999999999
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCC
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
+|+||||+.||+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+++....
T Consensus 114 ~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 114 LYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred EEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 99999999999999999874 4589999999999999999999999999999999999999999999999999854211
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
. .......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.
T Consensus 192 ~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~ 244 (373)
T 2r5t_A 192 H---------------------------NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT 244 (373)
T ss_dssp C---------------------------CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH
T ss_pred C---------------------------CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH
Confidence 0 1123457899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCCCCCCCCCCc
Q 001869 904 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATD 982 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~ 982 (1002)
.+.+..++.....++. .++..+++||.+||+.||.+||++.+.+.++++||||++++|..+.....+....|.....
T Consensus 245 ~~~~~~i~~~~~~~~~--~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~~w~~l~~~~~~pp~~p~~~~~ 321 (373)
T 2r5t_A 245 AEMYDNILNKPLQLKP--NITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDDLINKKITPPFNPNVSGP 321 (373)
T ss_dssp HHHHHHHHHSCCCCCS--SSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCSCCC-
T ss_pred HHHHHHHHhcccCCCC--CCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCCCHHHHHhCCCCCCCCCCCCCc
Confidence 9999999988776664 4789999999999999999999988888999999999999999995544333366765543
No 24
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-47 Score=426.84 Aligned_cols=281 Identities=40% Similarity=0.775 Sum_probs=245.9
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
+..++|++++.||+|+||.||+|.+..+|+.||+|++.+...........+.+|+.+++.++||||+++++++.+.+.+|
T Consensus 3 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~ 82 (318)
T 1fot_A 3 YSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIF 82 (318)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEE
T ss_pred CChHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEE
Confidence 34678999999999999999999999999999999998754433445667888999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+||||++||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 83 lv~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~-- 158 (318)
T 1fot_A 83 MIMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-- 158 (318)
T ss_dssp EEECCCCSCBHHHHHHHT--SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS--
T ss_pred EEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCC--
Confidence 999999999999999874 4599999999999999999999999999999999999999999999999999864321
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
.....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+...
T Consensus 159 ----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~ 210 (318)
T 1fot_A 159 ----------------------------VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK 210 (318)
T ss_dssp ----------------------------CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred ----------------------------ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH
Confidence 1234689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh-cHHHHHcCCCcCCCChhhhhccCCCCCCCCCCC
Q 001869 906 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVRCMNPPELDAPLFA 980 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~-~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~ 980 (1002)
.+..++.....+|. .++.++++||.+||+.||.+||+... .++++++||||++++|..+.....+....|...
T Consensus 211 ~~~~i~~~~~~~p~--~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~~~~~~~~~~~~~p~~p~~~ 284 (318)
T 1fot_A 211 TYEKILNAELRFPP--FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEPPIQ 284 (318)
T ss_dssp HHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCCHHHHHTTCSCCSCCCCC-
T ss_pred HHHHHHhCCCCCCC--CCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCCCHHHHHhCCCCCCCCCCcC
Confidence 99999988877764 47889999999999999999994322 399999999999999999854443333556543
No 25
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.5e-47 Score=443.37 Aligned_cols=287 Identities=34% Similarity=0.631 Sum_probs=247.0
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+..++|++++.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||++++++|.+.+.+
T Consensus 65 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 144 (410)
T 3v8s_A 65 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL 144 (410)
T ss_dssp SCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEE
Confidence 35567999999999999999999999999999999999864333333334577899999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+|||||+||+|.+++... .+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||++......
T Consensus 145 ~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~ 221 (410)
T 3v8s_A 145 YMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE 221 (410)
T ss_dssp EEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccC
Confidence 9999999999999999763 4899999999999999999999999999999999999999999999999999654311
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCC----CCChhhHHHHHHHHHHHHcCCCCCCC
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~----~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
. .....+.+||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+
T Consensus 222 ~--------------------------~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 275 (410)
T 3v8s_A 222 G--------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 275 (410)
T ss_dssp S--------------------------EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred C--------------------------cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCC
Confidence 1 11233568999999999998765 78899999999999999999999999
Q ss_pred CChHHHHHHHHhC--CCCCCCCCCCCHHHHHHHHHccccCcCC--CCCChhcHHHHHcCCCcCCCChhhh--hccCCCCC
Q 001869 901 KTRQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKS--RLGSHEGANEIKKHPFFKGVNWALV--RCMNPPEL 974 (1002)
Q Consensus 901 ~~~~~~~~~i~~~--~~~~~~~~~~s~~~~~Ll~~~L~~dP~~--Rpt~~~~a~elL~Hp~f~~~~~~~~--~~~~~~~~ 974 (1002)
.+....+.+++.. .+.+|....++.++++||.+||+.+|.+ |++ +++|++||||++++|..+ +...||
T Consensus 276 ~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~----~~ei~~Hp~f~~~~w~~~~~~~~~~p-- 349 (410)
T 3v8s_A 276 DSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNG----VEEIKRHLFFKNDQWAWETLRDTVAP-- 349 (410)
T ss_dssp SSHHHHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSC----HHHHHTSGGGCCSSCCSTTGGGSCCS--
T ss_pred CChhhHHHHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCC----HHHHhcCccccCCCHHHHhhcccCCC--
Confidence 9999999988864 3567776778999999999999999988 999 999999999999998755 556666
Q ss_pred CCCCCCCccccc
Q 001869 975 DAPLFATDTEKE 986 (1002)
Q Consensus 975 ~~p~~~~~~~~~ 986 (1002)
..|.++.+.+..
T Consensus 350 ~~p~~~~~~d~~ 361 (410)
T 3v8s_A 350 VVPDLSSDIDTS 361 (410)
T ss_dssp CCCCCSSTTCCT
T ss_pred CCCcCCCccchh
Confidence 668766554433
No 26
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.5e-47 Score=432.14 Aligned_cols=280 Identities=35% Similarity=0.704 Sum_probs=240.0
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 744 (1002)
+..++|++++.||+|+||.||+|.+..+++.||||++++...........+..|..++..+ +||||+++++++.+.+.+
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 5678999999999999999999999999999999999875433334556778899999876 999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+|||||+||+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||++......
T Consensus 94 ~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 171 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 171 (345)
T ss_dssp EEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccC
Confidence 9999999999999999864 45999999999999999999999999999999999999999999999999998542110
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..
T Consensus 172 ---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~ 224 (345)
T 1xjd_A 172 ---------------------------DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE 224 (345)
T ss_dssp ---------------------------TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred ---------------------------CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH
Confidence 11234568999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHH-HHHcCCCcCCCChhhhhccCCCCCCCCCCC
Q 001869 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN-EIKKHPFFKGVNWALVRCMNPPELDAPLFA 980 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~-elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~ 980 (1002)
+.+..+......+|. .++.++++||.+||+.||.+||+ +. ++++||||++++|..+.....+....|.+.
T Consensus 225 ~~~~~i~~~~~~~p~--~~s~~~~~li~~lL~~dp~~R~~----~~~~i~~hp~f~~~~w~~l~~~~~~~p~~p~~~ 295 (345)
T 1xjd_A 225 ELFHSIRMDNPFYPR--WLEKEAKDLLVKLFVREPEKRLG----VRGDIRQHPLFREINWEELERKEIDPPFRPKVK 295 (345)
T ss_dssp HHHHHHHHCCCCCCT--TSCHHHHHHHHHHSCSSGGGSBT----TBSCGGGSGGGTTCCHHHHHTTCSCC-------
T ss_pred HHHHHHHhCCCCCCc--ccCHHHHHHHHHHhcCCHhHcCC----ChHHHHcCccccCCCHHHHhhCCCCCCcCCCCC
Confidence 999999888777664 47899999999999999999999 55 899999999999999955443333556654
No 27
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=6.1e-47 Score=430.16 Aligned_cols=284 Identities=37% Similarity=0.654 Sum_probs=250.2
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
...++|++++.||+|+||.||+|.+..+|+.||||++.+...........+.+|+.+++.++||||+++++++.+.+.+|
T Consensus 38 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 117 (350)
T 1rdq_E 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLY 117 (350)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred CCHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEE
Confidence 44679999999999999999999999999999999998764444445677889999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+||||++|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 118 lv~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~-- 193 (350)
T 1rdq_E 118 MVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-- 193 (350)
T ss_dssp EEEECCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS--
T ss_pred EEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccC--
Confidence 999999999999999875 4599999999999999999999999999999999999999999999999999865321
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
.....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+...
T Consensus 194 ----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~ 245 (350)
T 1rdq_E 194 ----------------------------RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245 (350)
T ss_dssp ----------------------------CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred ----------------------------CcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH
Confidence 1234689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhccCCCCCCCCCCCCcc
Q 001869 906 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDT 983 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~~ 983 (1002)
.+..+..+...+|. .++.++.+||.+||+.||.+||++. ..++++++||||++++|..+.....+....|.+....
T Consensus 246 ~~~~i~~~~~~~p~--~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~~w~~~~~~~~~~p~~p~~~~~~ 322 (350)
T 1rdq_E 246 IYEKIVSGKVRFPS--HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPG 322 (350)
T ss_dssp HHHHHHHCCCCCCT--TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCSTT
T ss_pred HHHHHHcCCCCCCC--CCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCCCHHHHhhccCCCCCCCCCCCcc
Confidence 99999998877764 4789999999999999999999853 4589999999999999998854444434667655443
No 28
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=7.4e-47 Score=429.67 Aligned_cols=285 Identities=34% Similarity=0.647 Sum_probs=247.3
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCe
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 743 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 743 (1002)
.+..++|++++.||+|+||.||+|.+..+++.||||++++...........+..|..++..+ +||||+++++++.+.+.
T Consensus 16 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~ 95 (353)
T 2i0e_A 16 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR 95 (353)
T ss_dssp ---CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSE
T ss_pred CCchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCE
Confidence 35678999999999999999999999999999999999876443444566788899999887 89999999999999999
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCC
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
+|+||||++||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||++.....
T Consensus 96 ~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 96 LYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 99999999999999999864 4599999999999999999999999999999999999999999999999999854211
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
. .......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.
T Consensus 174 ~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~ 226 (353)
T 2i0e_A 174 D---------------------------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE 226 (353)
T ss_dssp T---------------------------TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred C---------------------------CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH
Confidence 0 1123456899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhccCCCCCCCCCCC
Q 001869 904 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPLFA 980 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~ 980 (1002)
.+.+..++.....+|. .++.++++||.+||+.||.+||++. ..++++++||||++++|..+.....+....|...
T Consensus 227 ~~~~~~i~~~~~~~p~--~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~~w~~l~~~~~~~p~~p~~~ 302 (353)
T 2i0e_A 227 DELFQSIMEHNVAYPK--SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKAC 302 (353)
T ss_dssp HHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCC
T ss_pred HHHHHHHHhCCCCCCC--CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCCCHHHHHhCCCCCCcCCCCC
Confidence 9999999998877765 4789999999999999999999753 3589999999999999999854443333566653
No 29
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=3.7e-47 Score=443.44 Aligned_cols=290 Identities=34% Similarity=0.624 Sum_probs=248.2
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+..++|++++.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.++..++||||++++++|.+.+.+
T Consensus 70 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~ 149 (437)
T 4aw2_A 70 RLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNL 149 (437)
T ss_dssp SCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEE
T ss_pred cCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEE
Confidence 45568999999999999999999999999999999999864333333334578899999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+|||||+||+|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|......
T Consensus 150 ~lV~Ey~~gg~L~~~l~~~-~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~ 228 (437)
T 4aw2_A 150 YLVMDYYVGGDLLTLLSKF-EDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 228 (437)
T ss_dssp EEEECCCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEEEecCCCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccC
Confidence 9999999999999999763 345999999999999999999999999999999999999999999999999999654211
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCccccccccc-----CCCCCChhhHHHHHHHHHHHHcCCCCCC
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFR 899 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~~~~sDIwSlGvil~elltG~~Pf~ 899 (1002)
. .......+||+.|+|||++. ...++.++|||||||++|+|++|+.||.
T Consensus 229 ~--------------------------~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~ 282 (437)
T 4aw2_A 229 G--------------------------TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFY 282 (437)
T ss_dssp S--------------------------CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred C--------------------------CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCC
Confidence 1 11223468999999999997 5678899999999999999999999999
Q ss_pred CCChHHHHHHHHhC--CCCCCCC-CCCCHHHHHHHHHccccCcCC--CCCChhcHHHHHcCCCcCCCChhhhhccCCCCC
Q 001869 900 GKTRQKTFANILHK--DLKFPSS-TPTSLHAKQLMYRLLHRDPKS--RLGSHEGANEIKKHPFFKGVNWALVRCMNPPEL 974 (1002)
Q Consensus 900 ~~~~~~~~~~i~~~--~~~~~~~-~~~s~~~~~Ll~~~L~~dP~~--Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~ 974 (1002)
+.+..+.+.+++.. .+.+|.. ..++.++++||++||+.+|.+ |++ ++++++||||++++|..++...||
T Consensus 283 ~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~----~~eil~Hpff~~i~w~~l~~~~~p-- 356 (437)
T 4aw2_A 283 AESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNG----IEDFKKHPFFSGIDWDNIRNCEAP-- 356 (437)
T ss_dssp CSSHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTT----THHHHTSGGGTTCCTTTGGGSCCS--
T ss_pred CCChhHHHHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCC----HHHHhCCCccCCCCHHHHhhCCCC--
Confidence 99999999888753 3455544 457999999999999998888 888 999999999999999999988888
Q ss_pred CCCCCCCcccccc
Q 001869 975 DAPLFATDTEKEY 987 (1002)
Q Consensus 975 ~~p~~~~~~~~~~ 987 (1002)
..|.+....+..+
T Consensus 357 ~~P~~~~~~d~~~ 369 (437)
T 4aw2_A 357 YIPEVSSPTDTSN 369 (437)
T ss_dssp CCCCCSSTTCCTT
T ss_pred CCCcCCCccchhh
Confidence 5576655544443
No 30
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=3.4e-46 Score=428.24 Aligned_cols=285 Identities=32% Similarity=0.609 Sum_probs=243.5
Q ss_pred ccccccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 001869 661 DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (1002)
Q Consensus 661 ~~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (1002)
..++.+..++|++++.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||++++++|.+
T Consensus 7 ~~~~~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 86 (384)
T 4fr4_A 7 DENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQD 86 (384)
T ss_dssp -CCCCCCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred CCCCCCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 34566788999999999999999999999999999999999987654445556788899999999999999999999999
Q ss_pred CCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcc
Q 001869 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
.+.+|+|||||.||+|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++..
T Consensus 87 ~~~~~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~ 164 (384)
T 4fr4_A 87 EEDMFMVVDLLLGGDLRYHLQQN--VHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAM 164 (384)
T ss_dssp SSEEEEEECCCTTEEHHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred CCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeee
Confidence 99999999999999999999864 4599999999999999999999999999999999999999999999999999965
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC---CCCCChhhHHHHHHHHHHHHcCCCC
Q 001869 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~---~~~~~~sDIwSlGvil~elltG~~P 897 (1002)
.... ......+||+.|+|||++.+ ..++.++|||||||++|+|++|..|
T Consensus 165 ~~~~----------------------------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~P 216 (384)
T 4fr4_A 165 LPRE----------------------------TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216 (384)
T ss_dssp CCTT----------------------------CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCS
T ss_pred ccCC----------------------------CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCC
Confidence 4211 12235689999999999964 4588899999999999999999999
Q ss_pred CCC---CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCCC
Q 001869 898 FRG---KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPEL 974 (1002)
Q Consensus 898 f~~---~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~ 974 (1002)
|.+ ......+..+......+|. .++..+.+||.+||+.||.+||++ ++++++||||++++|..+.....+..
T Consensus 217 f~~~~~~~~~~~~~~~~~~~~~~p~--~~s~~~~~li~~lL~~dP~~R~s~---~~~l~~hp~f~~~~w~~~~~~~~~p~ 291 (384)
T 4fr4_A 217 YHIRSSTSSKEIVHTFETTVVTYPS--AWSQEMVSLLKKLLEPNPDQRFSQ---LSDVQNFPYMNDINWDAVFQKRLIPG 291 (384)
T ss_dssp SCCCTTSCHHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHSCSSGGGSCCS---HHHHHTSGGGTTCCHHHHHTTCSCCC
T ss_pred CCCCCCccHHHHHHHHhhcccCCCC--cCCHHHHHHHHHHhcCCHhHhccc---HHHHHcChhhhcCCHHHHHhCCCCCC
Confidence 974 3445555666666655554 478999999999999999999984 78999999999999999855444434
Q ss_pred CCCCCC
Q 001869 975 DAPLFA 980 (1002)
Q Consensus 975 ~~p~~~ 980 (1002)
..|...
T Consensus 292 ~~p~~~ 297 (384)
T 4fr4_A 292 FIPNKG 297 (384)
T ss_dssp CCCSCC
T ss_pred CCCCCC
Confidence 556543
No 31
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.6e-47 Score=437.28 Aligned_cols=285 Identities=35% Similarity=0.643 Sum_probs=241.7
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+..++|++++.||+|+||.||+|.+..+++.||||++.+...........+.+|+.++..++||||++++++|.+.+.+
T Consensus 57 ~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~ 136 (412)
T 2vd5_A 57 RLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYL 136 (412)
T ss_dssp SCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEE
T ss_pred cCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEE
Confidence 45678999999999999999999999999999999999865433334445678899999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+|||||+||+|.+++.+.. ..+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||++......
T Consensus 137 ~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~ 215 (412)
T 2vd5_A 137 YLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRAD 215 (412)
T ss_dssp EEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccCC
Confidence 99999999999999997642 35999999999999999999999999999999999999999999999999999654311
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCccccccccc-------CCCCCChhhHHHHHHHHHHHHcCCCC
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-------GAGHTSAVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-------~~~~~~~sDIwSlGvil~elltG~~P 897 (1002)
. .......+||+.|+|||++. ...++.++|||||||++|+|++|+.|
T Consensus 216 ~--------------------------~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~P 269 (412)
T 2vd5_A 216 G--------------------------TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269 (412)
T ss_dssp S--------------------------CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCT
T ss_pred C--------------------------ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCC
Confidence 0 01123468999999999997 45688999999999999999999999
Q ss_pred CCCCChHHHHHHHHhC--CCCCCC-CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCCC
Q 001869 898 FRGKTRQKTFANILHK--DLKFPS-STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPEL 974 (1002)
Q Consensus 898 f~~~~~~~~~~~i~~~--~~~~~~-~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~ 974 (1002)
|.+.+..+.+.+++.. ...+|. ...++.++++||++||+ +|.+|++ ...++++++||||++++|..++...||
T Consensus 270 f~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlg-r~~~~ei~~Hpff~~i~w~~l~~~~~p-- 345 (412)
T 2vd5_A 270 FYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLG-RGGAGDFRTHPFFFGLDWDGLRDSVPP-- 345 (412)
T ss_dssp TCCSSHHHHHHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTT-TTTHHHHHTSGGGTTCCSTTSTTSCCS--
T ss_pred CCCCCHHHHHHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCC-CCCHHHHhcCCCcCCCCHHHHhhcCCC--
Confidence 9999999888888763 244443 24579999999999999 9999963 123999999999999999999887777
Q ss_pred CCCCCC
Q 001869 975 DAPLFA 980 (1002)
Q Consensus 975 ~~p~~~ 980 (1002)
..|.+.
T Consensus 346 ~~p~~~ 351 (412)
T 2vd5_A 346 FTPDFE 351 (412)
T ss_dssp CCCC--
T ss_pred CCCcCC
Confidence 567654
No 32
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.7e-45 Score=412.97 Aligned_cols=261 Identities=29% Similarity=0.508 Sum_probs=233.9
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
+...++|++++.||+|+||.||+|.+..+|+.||||++.+... .......+.+|+.+++.++||||+++++++...+.+
T Consensus 11 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 89 (328)
T 3fe3_A 11 QPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTL 89 (328)
T ss_dssp CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred CCccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEE
Confidence 3456799999999999999999999999999999999987533 455667888999999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||++|++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 90 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 167 (328)
T 3fe3_A 90 YLIMEYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG 167 (328)
T ss_dssp EEEECCCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS
T ss_pred EEEEECCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCC
Confidence 9999999999999999765 45999999999999999999999999999999999999999999999999998643211
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCC-ChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHT-SAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~-~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
......+||+.|+|||++.+..+. .++|||||||++|+|++|..||.+.+.
T Consensus 168 ----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 219 (328)
T 3fe3_A 168 ----------------------------GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 219 (328)
T ss_dssp ----------------------------CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred ----------------------------CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH
Confidence 112346899999999999888775 689999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCC
Q 001869 904 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 962 (1002)
......+..+...+|. .++.++.+||.+||..||.+||| ++++++||||+...
T Consensus 220 ~~~~~~i~~~~~~~p~--~~s~~~~~li~~~L~~dP~~R~t----~~eil~h~~~~~~~ 272 (328)
T 3fe3_A 220 KELRERVLRGKYRIPF--YMSTDCENLLKRFLVLNPIKRGT----LEQIMKDRWINAGH 272 (328)
T ss_dssp HHHHHHHHHCCCCCCT--TSCHHHHHHHHHHCCSSTTTSCC----HHHHTTCTTTTTTC
T ss_pred HHHHHHHHhCCCCCCC--CCCHHHHHHHHHHCCCChhHCcC----HHHHhcCHhhcCCC
Confidence 9999999888777665 47899999999999999999999 99999999999754
No 33
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=6.9e-46 Score=436.01 Aligned_cols=293 Identities=40% Similarity=0.740 Sum_probs=240.6
Q ss_pred cccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 001869 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (1002)
..+..++|++++.||+|+||.||+|.+..+++.||||++.+...........+.+|+.+++.++||||+++++++...+.
T Consensus 143 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~ 222 (446)
T 4ejn_A 143 HRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDR 222 (446)
T ss_dssp -CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTE
T ss_pred cCCChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCE
Confidence 34567899999999999999999999999999999999987654455566778889999999999999999999999999
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCCEEEccCCcEEEEeccCCcccC
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
+|+|||||+|++|.+++... ..+++..++.++.||+.||+|||+ +||+||||||+|||++.++.+||+|||++....
T Consensus 223 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 300 (446)
T 4ejn_A 223 LCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 300 (446)
T ss_dssp EEEEECCCSSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred EEEEEeeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence 99999999999999999765 459999999999999999999998 999999999999999999999999999985422
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
.. .......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+
T Consensus 301 ~~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 353 (446)
T 4ejn_A 301 KD---------------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 353 (446)
T ss_dssp C--------------------------------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CC---------------------------CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC
Confidence 11 112234689999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhccCCCCCCCCCCCC
Q 001869 903 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPLFAT 981 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~ 981 (1002)
....+..+......+|. .+++++.+||.+||+.||.+||+.. +.++++++||||++++|..+.....+....|....
T Consensus 354 ~~~~~~~i~~~~~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~~~~~~~~~~~~pp~~p~~~~ 431 (446)
T 4ejn_A 354 HEKLFELILMEEIRFPR--TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTS 431 (446)
T ss_dssp HHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCSCSS
T ss_pred HHHHHHHHHhCCCCCCc--cCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCCCHHHHhhCcCCCCccCCCCC
Confidence 99999999888877765 3789999999999999999999211 12999999999999999988544444446676654
Q ss_pred cccccc
Q 001869 982 DTEKEY 987 (1002)
Q Consensus 982 ~~~~~~ 987 (1002)
..+..|
T Consensus 432 ~~~~~~ 437 (446)
T 4ejn_A 432 ETDTRY 437 (446)
T ss_dssp TTCCTT
T ss_pred ccchhh
Confidence 444333
No 34
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.6e-45 Score=438.87 Aligned_cols=287 Identities=30% Similarity=0.548 Sum_probs=246.6
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+..++|++++.||+|+||.||+|.+..+|+.||||++.+...........+.+|+.+++.++||||++++++|.+.+.+
T Consensus 181 ~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l 260 (543)
T 3c4z_A 181 PMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDL 260 (543)
T ss_dssp CCCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred cCChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEE
Confidence 35567999999999999999999999999999999999876544444566788999999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccC
Q 001869 745 CLITDYCPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~--~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
|+|||||+||+|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||++....
T Consensus 261 ~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 261 CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp EEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 99999999999999987643 3469999999999999999999999999999999999999999999999999996542
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC-
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK- 901 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~- 901 (1002)
.. .......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.
T Consensus 341 ~~---------------------------~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~ 393 (543)
T 3c4z_A 341 AG---------------------------QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG 393 (543)
T ss_dssp TT---------------------------CCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTT
T ss_pred CC---------------------------CcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCc
Confidence 11 01123468999999999999999999999999999999999999999875
Q ss_pred ---ChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh-cHHHHHcCCCcCCCChhhhhccCCCCCCCC
Q 001869 902 ---TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVRCMNPPELDAP 977 (1002)
Q Consensus 902 ---~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~-~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p 977 (1002)
........+......+|. .++..+++||.+||+.||.+||++.+ .++++++||||++++|..+.....+....|
T Consensus 394 ~~~~~~~~~~~i~~~~~~~p~--~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i~w~~l~~~~~~pp~~P 471 (543)
T 3c4z_A 394 EKVENKELKQRVLEQAVTYPD--KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVP 471 (543)
T ss_dssp CCCCHHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTCCHHHHHTTCSCCSCCC
T ss_pred cchhHHHHHHHHhhcccCCCc--ccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCCCHHHHHcCCCCCCCCC
Confidence 346677777777766663 57899999999999999999998654 579999999999999999865433333566
Q ss_pred CCC
Q 001869 978 LFA 980 (1002)
Q Consensus 978 ~~~ 980 (1002)
...
T Consensus 472 ~~~ 474 (543)
T 3c4z_A 472 DSR 474 (543)
T ss_dssp CSS
T ss_pred Ccc
Confidence 543
No 35
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=3.4e-45 Score=412.15 Aligned_cols=286 Identities=42% Similarity=0.741 Sum_probs=234.7
Q ss_pred ccccCCcccccccccCCcEEEEEEEEc---CCCeEEEEEEeeccccc-ChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVML-NRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~---~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (1002)
.+..++|++++.||+|+||.||+|.+. .+++.||+|++++.... .......+.+|+.+++.++||||+++++++..
T Consensus 13 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 92 (327)
T 3a62_A 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQT 92 (327)
T ss_dssp CCCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEEC
T ss_pred CCCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEc
Confidence 456789999999999999999999985 68999999999875332 22344567789999999999999999999999
Q ss_pred CCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcc
Q 001869 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
.+.+|+|||||.|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++..
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 93 GGKLYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp SSCEEEEEECCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred CCEEEEEEeCCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 99999999999999999999864 4589999999999999999999999999999999999999999999999999854
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001869 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
.... .......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+
T Consensus 171 ~~~~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 223 (327)
T 3a62_A 171 SIHD---------------------------GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTG 223 (327)
T ss_dssp -----------------------------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccC---------------------------CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCC
Confidence 2211 0112346799999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhccCCCCCCCCCC
Q 001869 901 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPLF 979 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~ 979 (1002)
.+....+..+......++. .++..+++||.+||..||.+||++. ..+.++++||||++++|..+.....+....|.+
T Consensus 224 ~~~~~~~~~i~~~~~~~p~--~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~~~~~~~~~~~~~p~~p~~ 301 (327)
T 3a62_A 224 ENRKKTIDKILKCKLNLPP--YLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLL 301 (327)
T ss_dssp SSHHHHHHHHHHTCCCCCT--TSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSCCHHHHHTTCSCCSCCCC-
T ss_pred CCHHHHHHHHHhCCCCCCC--CCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCCCHHHHhhccCCCCCCCCc
Confidence 9999988999888776664 4788999999999999999999543 249999999999999999885444333355665
Q ss_pred CC
Q 001869 980 AT 981 (1002)
Q Consensus 980 ~~ 981 (1002)
..
T Consensus 302 ~~ 303 (327)
T 3a62_A 302 QS 303 (327)
T ss_dssp --
T ss_pred CC
Confidence 43
No 36
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=3.6e-45 Score=417.10 Aligned_cols=265 Identities=29% Similarity=0.452 Sum_probs=235.3
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccCh---hHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR---NKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+.|++++.||+|+||.||+|.+..+|+.||+|++.+...... .....+.+|+.+++.++||||++++++|.+.+.+
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 4689999999999999999999999999999999987543221 1346788999999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCC----cEEEEeccCCcc
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG----HVSLTDFDLSCL 820 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g----~vkL~DFG~a~~ 820 (1002)
|+||||+.|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++..
T Consensus 91 ~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~ 168 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (361)
T ss_dssp EEEEECCCSCBHHHHHTTC--SCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEE
T ss_pred EEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceE
Confidence 9999999999999999764 4699999999999999999999999999999999999998776 799999999865
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001869 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
.... ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+
T Consensus 169 ~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~ 220 (361)
T 2yab_A 169 IEDG----------------------------VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220 (361)
T ss_dssp CCTT----------------------------CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred cCCC----------------------------CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 4311 112346799999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHhCCCCCCCC--CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhh
Q 001869 901 KTRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 966 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~~~--~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~ 966 (1002)
.+..+.+..+......++.. ..++..+++||.+||..||.+||| +.++|+||||++++|...
T Consensus 221 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t----~~e~l~hp~~~~~~~~~~ 284 (361)
T 2yab_A 221 DTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLT----IQEALRHPWITPVDTQQA 284 (361)
T ss_dssp SSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCC----HHHHHTSTTTSCSSHHHH
T ss_pred CCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcC----HHHHhcCcCcCCCchhhh
Confidence 99999999998887766532 457889999999999999999999 999999999999998755
No 37
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=3.1e-45 Score=437.41 Aligned_cols=285 Identities=33% Similarity=0.546 Sum_probs=242.7
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+..++|++++.||+|+||.||+|.+..+|+.||||++.+...........+.+|+.+|+.++||||+++++++.+.+.+
T Consensus 180 ~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l 259 (576)
T 2acx_A 180 PVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDAL 259 (576)
T ss_dssp CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred CccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEE
Confidence 35678999999999999999999999999999999999875444444556788999999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+|||||+||+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||++......
T Consensus 260 ~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 260 CLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp EEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 99999999999999998765556999999999999999999999999999999999999999999999999999653211
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC--
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT-- 902 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~-- 902 (1002)
......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+..
T Consensus 340 ----------------------------~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~ 391 (576)
T 2acx_A 340 ----------------------------QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK 391 (576)
T ss_dssp ----------------------------CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSC
T ss_pred ----------------------------ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccc
Confidence 11224589999999999999999999999999999999999999998753
Q ss_pred --hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhccCCCCCCCCCC
Q 001869 903 --RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPLF 979 (1002)
Q Consensus 903 --~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~ 979 (1002)
.......+......++ ..++.++++||.+||+.||.+||++. ..++++++||||++++|..+.....+....|..
T Consensus 392 ~~~~~i~~~i~~~~~~~p--~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i~w~~l~~~~~~pp~~p~~ 469 (576)
T 2acx_A 392 IKREEVERLVKEVPEEYS--ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDP 469 (576)
T ss_dssp CCHHHHHHHHHHCCCCCC--TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCC
T ss_pred hhHHHHHHHhhcccccCC--ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccCCHHHHhcCCCCCCCCCCc
Confidence 3455556666655555 35789999999999999999999543 148999999999999999986543332345543
No 38
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=5.7e-45 Score=447.84 Aligned_cols=285 Identities=34% Similarity=0.648 Sum_probs=248.6
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCe
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 743 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 743 (1002)
.+..++|++++.||+|+||.||+|.+..+++.||||++++...........+..|..++..+ +||+|+.++++|.+.+.
T Consensus 337 ~~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~ 416 (674)
T 3pfq_A 337 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR 416 (674)
T ss_dssp ---CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSE
T ss_pred cccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCE
Confidence 45678999999999999999999999999999999999876444444556778899999887 79999999999999999
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCC
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
+||||||++||+|..++... ..+++..++.|+.||+.||+|||++|||||||||+||||+.+|++||+|||+++....
T Consensus 417 ~~lV~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 494 (674)
T 3pfq_A 417 LYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494 (674)
T ss_dssp EEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred EEEEEeCcCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence 99999999999999999875 4599999999999999999999999999999999999999999999999999864221
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
. .......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+.
T Consensus 495 ~---------------------------~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~ 547 (674)
T 3pfq_A 495 D---------------------------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE 547 (674)
T ss_dssp T---------------------------TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred C---------------------------CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH
Confidence 1 1123457899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCC-hhcHHHHHcCCCcCCCChhhhhccCCCCCCCCCCC
Q 001869 904 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFA 980 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~-~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~ 980 (1002)
.+.+..|+...+.+|. .++.++++||.+||+.||.+||++ ...+++|++||||++++|..+.....+....|..+
T Consensus 548 ~~~~~~i~~~~~~~p~--~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~w~~l~~~~~~pp~~p~~~ 623 (674)
T 3pfq_A 548 DELFQSIMEHNVAYPK--SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKAS 623 (674)
T ss_dssp HHHHHHHHSSCCCCCT--TSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSCCHHHHTTTCSCCSCCCBCC
T ss_pred HHHHHHHHhCCCCCCc--cCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCCCHHHHHhCCCCCCCCCcCC
Confidence 9999999998888775 478999999999999999999996 34569999999999999999954443333567654
No 39
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.2e-45 Score=411.65 Aligned_cols=257 Identities=31% Similarity=0.537 Sum_probs=222.5
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.++|++++.||+|+||.||+|.+..+|+.||||++.+.... .....+.+|+.+++.++||||+++++++...+.+|+|
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv 86 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG--SDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMV 86 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC-----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEE
Confidence 57999999999999999999999999999999999865432 2345678899999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
||||+|++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 87 ~E~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~-- 162 (347)
T 3zgw_A 87 LEYCPGGELFDYIISQ--DRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK-- 162 (347)
T ss_dssp EECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC-------
T ss_pred EeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCC--
Confidence 9999999999999765 459999999999999999999999999999999999999999999999999985432110
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCC-CChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
.......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+....
T Consensus 163 ------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~ 218 (347)
T 3zgw_A 163 ------------------------DYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMAL 218 (347)
T ss_dssp ---------------------------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred ------------------------CccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH
Confidence 011234679999999999988775 8899999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
+..+..+...+|.. ++..+.+||.+||+.||.+||| ++++++||||+.
T Consensus 219 ~~~i~~~~~~~p~~--~s~~~~~li~~~L~~dP~~Rps----~~eil~hp~~~~ 266 (347)
T 3zgw_A 219 YKKIMRGKYDVPKW--LSPSSILLLQQMLQVDPKKRIS----MKNLLNHPWIMQ 266 (347)
T ss_dssp HHHHHHTCCCCCTT--CCHHHHHHHHHHTCSSGGGSCC----HHHHHTCHHHHT
T ss_pred HHHHHcCCCCCCCC--CCHHHHHHHHHHcccCHhHCcC----HHHHhcCcchhc
Confidence 99999988776654 6889999999999999999999 999999999986
No 40
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=3.6e-44 Score=398.16 Aligned_cols=257 Identities=25% Similarity=0.407 Sum_probs=226.2
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.++|++++.||+|+||.||+|.+..+++.||||++..... .....+.+|+.+++.++||||+++++++...+.+|+|
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 95 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC---SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccc---cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEE
Confidence 4689999999999999999999999999999999875532 2345678899999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+.|++|.+++... .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 96 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 170 (297)
T 3fxz_A 96 MEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-- 170 (297)
T ss_dssp EECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT--
T ss_pred EECCCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc--
Confidence 9999999999999764 48999999999999999999999999999999999999999999999999986543211
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.....
T Consensus 171 -------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~ 225 (297)
T 3fxz_A 171 -------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 225 (297)
T ss_dssp -------------------------CCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred -------------------------cccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 1123467999999999999999999999999999999999999999998887776
Q ss_pred HHHHhC-CCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 908 ANILHK-DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 908 ~~i~~~-~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
..+... ...+.....++..+.+||.+||+.||.+||| +.++++||||+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~ell~h~~~~~~ 276 (297)
T 3fxz_A 226 YLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGS----AKELLQHQFLKIA 276 (297)
T ss_dssp HHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCC----HHHHTTCGGGGGC
T ss_pred HHHHhCCCCCCCCccccCHHHHHHHHHHccCChhHCcC----HHHHhhChhhccc
Confidence 666543 3334444567889999999999999999999 9999999999864
No 41
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=8.7e-44 Score=416.33 Aligned_cols=259 Identities=29% Similarity=0.470 Sum_probs=229.1
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.++|++++.||+|+||.||+|.+..+|+.||+|++..... .......+.+|+.+++.++||||+++++++.+.+.+|+|
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL-SARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSC-HHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccC-CHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 3689999999999999999999999999999999986533 334456788999999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEc---cCCcEEEEeccCCcccCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ---GNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~---~~g~vkL~DFG~a~~~~~~ 824 (1002)
||||.||+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 89 ~E~~~gg~L~~~i~~~--~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~ 166 (444)
T 3soa_A 89 FDLVTGGELFEDIVAR--EYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE 166 (444)
T ss_dssp ECCCBCCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTT
T ss_pred EEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCC
Confidence 9999999999999875 4599999999999999999999999999999999999998 4578999999999654311
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
. ......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..
T Consensus 167 ~---------------------------~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~ 219 (444)
T 3soa_A 167 Q---------------------------QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH 219 (444)
T ss_dssp C---------------------------CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred C---------------------------ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH
Confidence 1 1123467999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCC--CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 905 KTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~--~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
..+..+..+...++. ...++.++++||.+||+.||.+||| +.++|+||||+.
T Consensus 220 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt----a~e~L~hp~~~~ 273 (444)
T 3soa_A 220 RLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRIT----AAEALKHPWISH 273 (444)
T ss_dssp HHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCC----HHHHHHSCTTHH
T ss_pred HHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCC----HHHHhcCccccC
Confidence 999999888766554 3568999999999999999999999 999999999975
No 42
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.4e-43 Score=398.69 Aligned_cols=265 Identities=30% Similarity=0.464 Sum_probs=232.8
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccCh---hHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR---NKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+.|++.+.||+|+||.||+|.+..+++.||+|++........ .....+.+|+.+++.++||||+++++++.+.+.+
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 3579999999999999999999999999999999986533211 2356788999999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCC----cEEEEeccCCcc
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG----HVSLTDFDLSCL 820 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g----~vkL~DFG~a~~ 820 (1002)
|+||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++..
T Consensus 90 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~ 167 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167 (326)
T ss_dssp EEEEECCCSCBHHHHHTTS--SCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred EEEEEcCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeE
Confidence 9999999999999999764 5699999999999999999999999999999999999999877 899999999865
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001869 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
.... ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+
T Consensus 168 ~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 219 (326)
T 2y0a_A 168 IDFG----------------------------NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219 (326)
T ss_dssp CCTT----------------------------SCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred CCCC----------------------------CccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCC
Confidence 4311 111245799999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHhCCCCCCCC--CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhh
Q 001869 901 KTRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 966 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~~~--~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~ 966 (1002)
.+..+.+..+......++.. ..++..+++||.+||+.||.+||| +.++|+||||+..++...
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~e~l~hp~~~~~~~~~~ 283 (326)
T 2y0a_A 220 DTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMT----IQDSLQHPWIKPKDTQQA 283 (326)
T ss_dssp SSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCC----HHHHHHSTTTSCCSHHHH
T ss_pred CCHHHHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCC----HHHHhcCCCccCCcchhh
Confidence 99888888887776655432 457889999999999999999999 999999999999887644
No 43
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=4e-44 Score=397.61 Aligned_cols=263 Identities=31% Similarity=0.555 Sum_probs=222.7
Q ss_pred ccccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccC-----------------------hhHHHHHHHH
Q 001869 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-----------------------RNKVHRACAE 719 (1002)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~-----------------------~~~~~~~~~E 719 (1002)
+..+..++|++.+.||+|+||.||+|.+..+++.||||++....... ......+.+|
T Consensus 7 ~~~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E 86 (298)
T 2zv2_A 7 GDCVQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQE 86 (298)
T ss_dssp ---CEETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHH
T ss_pred CCceeecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHH
Confidence 44466789999999999999999999999999999999997653221 1123567899
Q ss_pred HHHHHhCCCCCcceEEEEEEe--CCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCC
Q 001869 720 REILDMLDHPFVPALYASFQT--KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL 797 (1002)
Q Consensus 720 ~~il~~l~hpnIv~l~~~~~~--~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDL 797 (1002)
+.+++.++||||+++++++.+ .+.+|+||||+++++|.+++.. ..+++..++.++.||+.||+|||++||+||||
T Consensus 87 ~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dl 163 (298)
T 2zv2_A 87 IAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL---KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDI 163 (298)
T ss_dssp HHHHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred HHHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence 999999999999999999986 6789999999999999886543 46999999999999999999999999999999
Q ss_pred CCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCC---
Q 001869 798 KPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG--- 874 (1002)
Q Consensus 798 KP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~--- 874 (1002)
||+|||++.++.+||+|||++....... .......||+.|+|||++.+..
T Consensus 164 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~ 216 (298)
T 2zv2_A 164 KPSNLLVGEDGHIKIADFGVSNEFKGSD---------------------------ALLSNTVGTPAFMAPESLSETRKIF 216 (298)
T ss_dssp CGGGEEECTTSCEEECCCTTCEECSSSS---------------------------CEECCCCSCGGGCCGGGCCTTCCCE
T ss_pred CHHHEEECCCCCEEEecCCCcccccccc---------------------------ccccCCcCCccccChhhhccCCCCC
Confidence 9999999999999999999986543110 1122457999999999997765
Q ss_pred CCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 875 HTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 875 ~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
++.++|||||||++|+|++|..||.+.........+......++....++..+.+||.+||+.||.+||| +.++++
T Consensus 217 ~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s----~~e~l~ 292 (298)
T 2zv2_A 217 SGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIV----VPEIKL 292 (298)
T ss_dssp ESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCC----HHHHTT
T ss_pred CCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCC----HHHHhc
Confidence 3678999999999999999999999988888888888887777777778999999999999999999999 999999
Q ss_pred CCCcC
Q 001869 955 HPFFK 959 (1002)
Q Consensus 955 Hp~f~ 959 (1002)
||||+
T Consensus 293 hp~~~ 297 (298)
T 2zv2_A 293 HPWVT 297 (298)
T ss_dssp CHHHH
T ss_pred Ccccc
Confidence 99996
No 44
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.1e-44 Score=400.80 Aligned_cols=257 Identities=26% Similarity=0.415 Sum_probs=229.2
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.++|++++.||+|+||.||+|.+..+++.||+|++... ......+.+|+.+++.++||||+++++++.+.+.+|+|
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 79 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK----GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMI 79 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC----THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC----cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEE
Confidence 46899999999999999999999999999999998743 23456678999999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEcc--CCcEEEEeccCCcccCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG--NGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~--~g~vkL~DFG~a~~~~~~~ 825 (1002)
||||+|++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++......
T Consensus 80 ~e~~~g~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~- 157 (321)
T 1tki_A 80 FEFISGLDIFERINTS-AFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG- 157 (321)
T ss_dssp ECCCCCCBHHHHHTSS-SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT-
T ss_pred EEeCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC-
Confidence 9999999999999754 346999999999999999999999999999999999999997 789999999998654211
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+...
T Consensus 158 ---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~ 210 (321)
T 1tki_A 158 ---------------------------DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ 210 (321)
T ss_dssp ---------------------------CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred ---------------------------CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH
Confidence 11234579999999999999888999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCC--CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 906 TFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~--~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
.+..+......++. ...++.++++||.+||..||.+||| +.++|+||||+..
T Consensus 211 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt----~~e~l~hp~~~~~ 264 (321)
T 1tki_A 211 IIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMT----ASEALQHPWLKQK 264 (321)
T ss_dssp HHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCC----HHHHHHSHHHHSC
T ss_pred HHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcC----HHHHhcChhhccC
Confidence 99999888776653 2457899999999999999999999 9999999999863
No 45
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.3e-43 Score=408.95 Aligned_cols=275 Identities=20% Similarity=0.331 Sum_probs=224.4
Q ss_pred ccCCcccccccccC--CcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 667 NLQHFRPIKPLGSG--DTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G--~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
..++|++++.||+| +||.||+|.+..+++.||||++..... .......+.+|+.+++.++||||+++++++.+.+.+
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 101 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC-SNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNEL 101 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEeccccc-ChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEE
Confidence 45789999999999 999999999999999999999987532 445667888999999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+|||||++++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||.+......
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~ 181 (389)
T 3gni_B 102 WVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISH 181 (389)
T ss_dssp EEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEET
T ss_pred EEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeeccc
Confidence 99999999999999998765567999999999999999999999999999999999999999999999999988543211
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC--CCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~--~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
.... ..........+||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+
T Consensus 182 ~~~~--------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 241 (389)
T 3gni_B 182 GQRQ--------------------RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMP 241 (389)
T ss_dssp TEEC--------------------SCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred cccc--------------------cccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC
Confidence 0000 000112234579999999999987 678999999999999999999999998866
Q ss_pred hHHHHHHHHhCCCC--------------------------------------------CCCCCCCCHHHHHHHHHccccC
Q 001869 903 RQKTFANILHKDLK--------------------------------------------FPSSTPTSLHAKQLMYRLLHRD 938 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~--------------------------------------------~~~~~~~s~~~~~Ll~~~L~~d 938 (1002)
....+..++....+ .+....++..+.+||.+||+.|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~d 321 (389)
T 3gni_B 242 ATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRN 321 (389)
T ss_dssp STTHHHHC--------------------------------------------------------CCHHHHHHHHHHTCSC
T ss_pred HHHHHHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcC
Confidence 55554443322211 0122346788999999999999
Q ss_pred cCCCCCChhcHHHHHcCCCcCCCChhhh
Q 001869 939 PKSRLGSHEGANEIKKHPFFKGVNWALV 966 (1002)
Q Consensus 939 P~~Rpt~~~~a~elL~Hp~f~~~~~~~~ 966 (1002)
|.+||| +.++|+||||+.+.+...
T Consensus 322 P~~Rpt----a~ell~hp~f~~~~~~~~ 345 (389)
T 3gni_B 322 PDARPS----ASTLLNHSFFKQIKRRAS 345 (389)
T ss_dssp TTTSCC----HHHHTTSGGGGGC---CC
T ss_pred cccCCC----HHHHhcCHHHHHHhhcch
Confidence 999999 999999999999887543
No 46
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.3e-43 Score=404.87 Aligned_cols=258 Identities=29% Similarity=0.488 Sum_probs=229.5
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.++|++++.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3579999999999999999999999999999999986533 345567788999999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccC---CcEEEEeccCCcccCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~---g~vkL~DFG~a~~~~~~ 824 (1002)
||||.|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+ +.+||+|||++......
T Consensus 107 ~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~ 184 (362)
T 2bdw_A 107 FDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184 (362)
T ss_dssp ECCCCSCBHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC
T ss_pred EecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCC
Confidence 9999999999999764 459999999999999999999999999999999999999865 45999999998653211
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..
T Consensus 185 ----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~ 236 (362)
T 2bdw_A 185 ----------------------------EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH 236 (362)
T ss_dssp ----------------------------CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred ----------------------------cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH
Confidence 1122457999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHhCCCCCCCC--CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 905 KTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~--~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
..+..+..+...++.. ..++.++++||.+||+.||.+||| +.++|+||||..
T Consensus 237 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l~hp~~~~ 290 (362)
T 2bdw_A 237 RLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRIT----ADQALKVPWICN 290 (362)
T ss_dssp HHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCC----HHHHTTSHHHHT
T ss_pred HHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcC----HHHHhcCcccCC
Confidence 8888888887666543 457899999999999999999999 999999999975
No 47
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3e-44 Score=399.05 Aligned_cols=247 Identities=22% Similarity=0.292 Sum_probs=186.8
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC----eE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----HV 744 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~----~~ 744 (1002)
.+|.+.+.||+|+||.||+|.+ +|+.||||+++... ........|+.++..++|||||++++++...+ .+
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~----~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~ 76 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc----hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEE
Confidence 4688899999999999999998 68999999986532 11122234555567789999999999997653 68
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc--------CcccCCCCCCCEEEccCCcEEEEecc
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ--------GIIYRDLKPENVLLQGNGHVSLTDFD 816 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~--------gIiHrDLKP~NILl~~~g~vkL~DFG 816 (1002)
|||||||+||+|.++++.. .+++..+..++.|++.||+|||++ +||||||||+|||++.++.+||+|||
T Consensus 77 ~lV~Ey~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFG 153 (303)
T 3hmm_A 77 WLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 153 (303)
T ss_dssp EEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred EEEecCCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCC
Confidence 9999999999999999863 489999999999999999999987 99999999999999999999999999
Q ss_pred CCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC------CCCChhhHHHHHHHHHH
Q 001869 817 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA------GHTSAVDWWALGILLYE 890 (1002)
Q Consensus 817 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~------~~~~~sDIwSlGvil~e 890 (1002)
+|+........ ........+||+.|||||++.+. .++.++|||||||+|||
T Consensus 154 la~~~~~~~~~-----------------------~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~E 210 (303)
T 3hmm_A 154 LAVRHDSATDT-----------------------IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 210 (303)
T ss_dssp TCEEEETTTTE-----------------------ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCccccCCCCc-----------------------eeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHH
Confidence 99654321110 01122346899999999999765 35669999999999999
Q ss_pred HHcCCCCCCCC---------------ChHHHHHHHHhCCC--CCCCC---CCCCHHHHHHHHHccccCcCCCCCChh
Q 001869 891 MLYGYTPFRGK---------------TRQKTFANILHKDL--KFPSS---TPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 891 lltG~~Pf~~~---------------~~~~~~~~i~~~~~--~~~~~---~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
|+||.+||... ........+..... .+|.. ...+..+.+|+.+||+.||.+|||+.+
T Consensus 211 l~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~e 287 (303)
T 3hmm_A 211 IARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALR 287 (303)
T ss_dssp HHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHH
T ss_pred HHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHH
Confidence 99997765321 12233333333333 22221 112346789999999999999999443
No 48
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=4.5e-43 Score=387.95 Aligned_cols=259 Identities=22% Similarity=0.400 Sum_probs=216.4
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||+|+||.||+|.+..+++.||+|++.... ........+.+|+.+++.++||||+++++++.+.+.+|+||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD-DDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSC-SSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccC-CcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEE
Confidence 58999999999999999999999999999999998653 24445577889999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+.+ +|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 e~~~~-~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 154 (292)
T 3o0g_A 81 EFCDQ-DLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP---- 154 (292)
T ss_dssp ECCSE-EHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSC----
T ss_pred ecCCC-CHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCc----
Confidence 99965 666666543 356999999999999999999999999999999999999999999999999999654311
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCC-CCChhhHHHHHHHHHHHHcCCCC-CCCCChHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTP-FRGKTRQKT 906 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~~~~sDIwSlGvil~elltG~~P-f~~~~~~~~ 906 (1002)
........||+.|+|||++.+.. ++.++|||||||++|+|++|..| |.+.+....
T Consensus 155 -----------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~ 211 (292)
T 3o0g_A 155 -----------------------VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ 211 (292)
T ss_dssp -----------------------CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHH
T ss_pred -----------------------cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHH
Confidence 11223457899999999998765 79999999999999999987777 556666666
Q ss_pred HHHHHhCC--CC---C----------------------CCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcC
Q 001869 907 FANILHKD--LK---F----------------------PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 959 (1002)
Q Consensus 907 ~~~i~~~~--~~---~----------------------~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 959 (1002)
+..+.... .. + .....++..+++||.+||+.||.+||| ++++|+||||+
T Consensus 212 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l~hp~f~ 287 (292)
T 3o0g_A 212 LKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRIS----AEEALQHPYFS 287 (292)
T ss_dssp HHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCC----HHHHHTSGGGT
T ss_pred HHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCC----HHHHhcCcccc
Confidence 66554310 00 0 011246789999999999999999999 99999999999
Q ss_pred CC
Q 001869 960 GV 961 (1002)
Q Consensus 960 ~~ 961 (1002)
++
T Consensus 288 ~~ 289 (292)
T 3o0g_A 288 DF 289 (292)
T ss_dssp TC
T ss_pred cC
Confidence 74
No 49
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.2e-44 Score=406.42 Aligned_cols=257 Identities=32% Similarity=0.516 Sum_probs=220.1
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (1002)
..++|++++.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++...+.+|+
T Consensus 7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 86 (336)
T 3h4j_B 7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM 86 (336)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 35799999999999999999999999999999999986543333334578899999999999999999999999999999
Q ss_pred EEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCC
Q 001869 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
||||+ +|+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 87 v~E~~-~g~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~-- 161 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVEK--KRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG-- 161 (336)
T ss_dssp EECCC-CEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS--
T ss_pred EEECC-CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCC--
Confidence 99999 88999998764 45999999999999999999999999999999999999999999999999998653211
Q ss_pred CCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCC-CChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001869 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.....
T Consensus 162 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~ 215 (336)
T 3h4j_B 162 --------------------------NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN 215 (336)
T ss_dssp --------------------------BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT
T ss_pred --------------------------cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH
Confidence 11234579999999999988776 679999999999999999999998765544
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 906 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
.+..+......+| ..++..+.+||.+||+.||.+||| ++++++||||+.
T Consensus 216 ~~~~i~~~~~~~p--~~~s~~~~~li~~~L~~dP~~Rpt----~~eil~hp~~~~ 264 (336)
T 3h4j_B 216 LFKKVNSCVYVMP--DFLSPGAQSLIRRMIVADPMQRIT----IQEIRRDPWFNV 264 (336)
T ss_dssp CBCCCCSSCCCCC--TTSCHHHHHHHHTTSCSSGGGSCC----HHHHTTCHHHHT
T ss_pred HHHHHHcCCCCCc--ccCCHHHHHHHHHHcCCChhHCcC----HHHHHhChhhcc
Confidence 3333333333333 347899999999999999999999 999999999986
No 50
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=2.7e-43 Score=393.72 Aligned_cols=264 Identities=24% Similarity=0.422 Sum_probs=217.4
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
-..++|++++.||+|+||.||+|.+. +++.||+|++.... ........+.+|+.+++.++||||+++++++.+.+.+|
T Consensus 18 ~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 95 (311)
T 3niz_A 18 GLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDA-EDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLT 95 (311)
T ss_dssp CSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC-------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEE
T ss_pred chHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEeccc-ccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEE
Confidence 34689999999999999999999994 58999999997642 23334567889999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+||||+. ++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 96 lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~- 172 (311)
T 3niz_A 96 LVFEFME-KDLKKVLDEN-KTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIP- 172 (311)
T ss_dssp EEEECCS-EEHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSC-
T ss_pred EEEcCCC-CCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCC-
Confidence 9999996 5888888654 345999999999999999999999999999999999999999999999999999654311
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
.......+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..
T Consensus 173 --------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~ 226 (311)
T 3niz_A 173 --------------------------VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDD 226 (311)
T ss_dssp --------------------------CC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTT
T ss_pred --------------------------cccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChH
Confidence 111233578999999999976 56889999999999999999999999887766
Q ss_pred HHHHHHHhC--CCC---CC-----------------------CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCC
Q 001869 905 KTFANILHK--DLK---FP-----------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHP 956 (1002)
Q Consensus 905 ~~~~~i~~~--~~~---~~-----------------------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp 956 (1002)
+.+..+... ... ++ ....++.++.+||.+||+.||.+||| ++++|+||
T Consensus 227 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell~hp 302 (311)
T 3niz_A 227 DQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRIS----ARDAMNHP 302 (311)
T ss_dssp THHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCC----HHHHHTSG
T ss_pred HHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCC----HHHHhcCc
Confidence 666555431 100 00 01235778999999999999999999 99999999
Q ss_pred CcCCCChh
Q 001869 957 FFKGVNWA 964 (1002)
Q Consensus 957 ~f~~~~~~ 964 (1002)
||+++++.
T Consensus 303 ~f~~~~~~ 310 (311)
T 3niz_A 303 YFKDLDPQ 310 (311)
T ss_dssp GGTTSCTT
T ss_pred ccccCCcc
Confidence 99997653
No 51
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.4e-43 Score=404.50 Aligned_cols=281 Identities=27% Similarity=0.424 Sum_probs=214.6
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCC--eE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKT--HV 744 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~--~~ 744 (1002)
.++|++++.||+|+||.||+|.+..+++.||||++... .........+.+|+.+++.+. ||||+++++++...+ .+
T Consensus 8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~-~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDA-FQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC---CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEeccc-ccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 47899999999999999999999999999999998754 334556678889999999997 999999999997544 79
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+|||||. ++|..++.. ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.....
T Consensus 87 ~lv~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 162 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNI 162 (388)
T ss_dssp EEEEECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSC
T ss_pred EEEecccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCccccccccc
Confidence 99999995 699999876 35899999999999999999999999999999999999999999999999999765322
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
......... . ..................+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+.
T Consensus 163 ~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~ 236 (388)
T 3oz6_A 163 RRVTNNIPL-----S-INENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST 236 (388)
T ss_dssp CCCCCCGGG-----C-CC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccccccccc-----c-ccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 111000000 0 00000000111223345689999999999987 6789999999999999999999999999988
Q ss_pred HHHHHHHHhCCCCCC----------------------------------------------CCCCCCHHHHHHHHHcccc
Q 001869 904 QKTFANILHKDLKFP----------------------------------------------SSTPTSLHAKQLMYRLLHR 937 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~----------------------------------------------~~~~~s~~~~~Ll~~~L~~ 937 (1002)
...+..++... ..| ....++.++.+||.+||+.
T Consensus 237 ~~~~~~i~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~ 315 (388)
T 3oz6_A 237 MNQLERIIGVI-DFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQF 315 (388)
T ss_dssp HHHHHHHHHHH-CCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCS
T ss_pred HHHHHHHHHhc-CCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhcc
Confidence 88877775310 111 1125688999999999999
Q ss_pred CcCCCCCChhcHHHHHcCCCcCCCChh
Q 001869 938 DPKSRLGSHEGANEIKKHPFFKGVNWA 964 (1002)
Q Consensus 938 dP~~Rpt~~~~a~elL~Hp~f~~~~~~ 964 (1002)
||.+||| ++++|+||||+.+...
T Consensus 316 dP~~R~t----~~e~l~Hp~~~~~~~~ 338 (388)
T 3oz6_A 316 NPNKRIS----ANDALKHPFVSIFHNP 338 (388)
T ss_dssp SGGGSCC----HHHHTTSTTTTTTCCG
T ss_pred CcccCCC----HHHHhCCHHHHHhcCC
Confidence 9999999 9999999999876443
No 52
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=3.4e-43 Score=414.57 Aligned_cols=302 Identities=23% Similarity=0.283 Sum_probs=211.8
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe-----CC
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-----KT 742 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-----~~ 742 (1002)
.++|++++.||+|+||.||+|.+..+++.||||++... .........+.+|+.+|+.++||||+++++++.. ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 130 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRV-FEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD 130 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECST-TSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechh-hcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence 47899999999999999999999999999999999764 3455667889999999999999999999999943 35
Q ss_pred eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccC
Q 001869 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
.+|+||||+ +++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+...
T Consensus 131 ~~~lv~e~~-~~~L~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 207 (458)
T 3rp9_A 131 ELYVVLEIA-DSDFKKLFRTP--VYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207 (458)
T ss_dssp CEEEEECCC-SEEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred eEEEEEecc-ccchhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhcc
Confidence 799999999 78999999764 459999999999999999999999999999999999999999999999999997654
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccc-cCCCCCChhhHHHHHHHHHHHHc--------
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII-AGAGHTSAVDWWALGILLYEMLY-------- 893 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l-~~~~~~~~sDIwSlGvil~ellt-------- 893 (1002)
....................................+||+.|+|||++ .+..++.++|||||||++|+|++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~ 287 (458)
T 3rp9_A 208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAY 287 (458)
T ss_dssp SCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSS
T ss_pred CccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccc
Confidence 322110000000000000000000000011223456899999999986 45678999999999999999998
Q ss_pred ---CCCCCCCCCh--------------------HHHHHHHHh--C--------------------CCCC-------CCCC
Q 001869 894 ---GYTPFRGKTR--------------------QKTFANILH--K--------------------DLKF-------PSST 921 (1002)
Q Consensus 894 ---G~~Pf~~~~~--------------------~~~~~~i~~--~--------------------~~~~-------~~~~ 921 (1002)
|.++|.+.+. ...+..+.. + .++. ....
T Consensus 288 ~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (458)
T 3rp9_A 288 HADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFP 367 (458)
T ss_dssp GGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGST
T ss_pred cccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCC
Confidence 7788876542 122222211 0 0000 0123
Q ss_pred CCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCCCCCC
Q 001869 922 PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAP 977 (1002)
Q Consensus 922 ~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p 977 (1002)
..+.++.+||.+||..||.+||| ++++|+||||+++.|...+.........|
T Consensus 368 ~~s~~~~dLl~~mL~~dP~~R~t----~~e~L~Hp~f~~~~~~~~e~~~~~~~~~~ 419 (458)
T 3rp9_A 368 ASSADAIHLLKRMLVFNPNKRIT----INECLAHPFFKEVRIAEVETNATEKVRLP 419 (458)
T ss_dssp TSCHHHHHHHHHHSCSSTTTSCC----HHHHHHSGGGTTTCCGGGCCCCSSCCCCS
T ss_pred CCCHHHHHHHHHHhccCccccCC----HHHHhcCHhhhhcCCCccCCCCCCCCCCC
Confidence 45889999999999999999999 99999999999999998755444333333
No 53
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.4e-43 Score=402.95 Aligned_cols=266 Identities=26% Similarity=0.430 Sum_probs=225.7
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccC--hhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN--RNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (1002)
+..+.|++.+.||+|+||.||+|.+..+++.||||++....... ......+.+|+.+++.++||||+++++++.+.+.
T Consensus 21 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 100 (351)
T 3c0i_A 21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGM 100 (351)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred ccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence 33468999999999999999999999999999999987543211 1235678899999999999999999999999999
Q ss_pred EEEEEecCCCCcHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCc---EEEEeccCC
Q 001869 744 VCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH---VSLTDFDLS 818 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~---vkL~DFG~a 818 (1002)
+|+|||||+|++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||++.++. +||+|||++
T Consensus 101 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 101 LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 99999999999999887642 2345899999999999999999999999999999999999986654 999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCC
Q 001869 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
....... ......+||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus 181 ~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf 233 (351)
T 3c0i_A 181 IQLGESG---------------------------LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233 (351)
T ss_dssp EECCTTS---------------------------CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred eEecCCC---------------------------eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCC
Confidence 6543110 1123457999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHhCCCCCCC--CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCCh
Q 001869 899 RGKTRQKTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 963 (1002)
Q Consensus 899 ~~~~~~~~~~~i~~~~~~~~~--~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 963 (1002)
.+. ....+..+......++. ...++..+++||.+||+.||.+||| +.++|+||||+..++
T Consensus 234 ~~~-~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s----~~e~l~hp~~~~~~~ 295 (351)
T 3c0i_A 234 YGT-KERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERIT----VYEALNHPWLKERDR 295 (351)
T ss_dssp CSS-HHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCC----HHHHHTSHHHHTHHH
T ss_pred CCc-HHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcC----HHHHhcChhhcCCcc
Confidence 875 45566677776655442 2457889999999999999999999 999999999997543
No 54
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=4.8e-43 Score=400.09 Aligned_cols=257 Identities=30% Similarity=0.472 Sum_probs=215.9
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
...++|++++.||+|+||.||+|.+..+++.||||++...... ...+.+|+.+++.++||||+++++++.+.+.+|
T Consensus 17 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 92 (361)
T 3uc3_A 17 HDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI----DENVQREIINHRSLRHPNIVRFKEVILTPTHLA 92 (361)
T ss_dssp CCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS----CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc----cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEE
Confidence 3457999999999999999999999999999999999764322 245778999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCc--EEEEeccCCcccCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH--VSLTDFDLSCLTSC 823 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~--vkL~DFG~a~~~~~ 823 (1002)
+|||||.|++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++. +||+|||++.....
T Consensus 93 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~ 170 (361)
T 3uc3_A 93 IIMEYASGGELYERICNA--GRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 170 (361)
T ss_dssp EEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-----
T ss_pred EEEEeCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccc
Confidence 999999999999999764 45999999999999999999999999999999999999987665 99999999853211
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCCh-hhHHHHHHHHHHHHcCCCCCCCCC
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSA-VDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~-sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
. ......+||+.|+|||++.+..++.+ +|||||||++|+|++|+.||.+..
T Consensus 171 ~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 222 (361)
T 3uc3_A 171 H----------------------------SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPE 222 (361)
T ss_dssp --------------------------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC---
T ss_pred c----------------------------CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCc
Confidence 0 11234579999999999988877655 899999999999999999998743
Q ss_pred h----HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 903 R----QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 903 ~----~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
. ...+..+......++....++..+.+||.+||+.||.+||| +.++++||||..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps----~~ell~hp~f~~ 280 (361)
T 3uc3_A 223 EPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRIS----IPEIKTHSWFLK 280 (361)
T ss_dssp -CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCC----HHHHHTSHHHHT
T ss_pred cHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcC----HHHHHhCcchhc
Confidence 3 55666677777777877778999999999999999999999 999999999954
No 55
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.2e-43 Score=396.70 Aligned_cols=261 Identities=26% Similarity=0.421 Sum_probs=220.6
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.++|++++.||+|+||.||+|.+..+++.||||++..... ......+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 83 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc--cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 4799999999999999999999999999999999875432 22335678899999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
||||+|++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 84 ~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~-- 159 (323)
T 3tki_A 84 LEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-- 159 (323)
T ss_dssp EECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETT--
T ss_pred EEcCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCC--
Confidence 9999999999998754 459999999999999999999999999999999999999999999999999996532111
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCC-CChhhHHHHHHHHHHHHcCCCCCCCCChH-H
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQ-K 905 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-~~~sDIwSlGvil~elltG~~Pf~~~~~~-~ 905 (1002)
........+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.... .
T Consensus 160 -----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~ 216 (323)
T 3tki_A 160 -----------------------RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ 216 (323)
T ss_dssp -----------------------EECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH
T ss_pred -----------------------cccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH
Confidence 0112234689999999999987765 67899999999999999999999876553 3
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 906 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
.+..+.......+....++..+.+||.+||+.||.+||| +.++++||||+..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~eil~h~~~~~~ 268 (323)
T 3tki_A 217 EYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT----IPDIKKDRWYNKP 268 (323)
T ss_dssp HHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCC----HHHHTTCTTTTCC
T ss_pred HHHHHhcccccCCccccCCHHHHHHHHHHccCChhhCcC----HHHHhhChhhccc
Confidence 344444554444555668899999999999999999999 9999999999874
No 56
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=8.1e-43 Score=401.24 Aligned_cols=260 Identities=28% Similarity=0.454 Sum_probs=229.0
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.+.|++++.||+|+||.||+|.+..+++.||+|++... .......+.+|+.+++.++||||+++++++.+.+.+|+|
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~---~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 126 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTP---YPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLI 126 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---SHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEeccc---chhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEE
Confidence 46899999999999999999999999999999998754 233456788999999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEcc--CCcEEEEeccCCcccCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG--NGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~--~g~vkL~DFG~a~~~~~~~ 825 (1002)
||||.|++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++. ++.+||+|||++......
T Consensus 127 ~E~~~gg~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~- 204 (387)
T 1kob_A 127 LEFLSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD- 204 (387)
T ss_dssp EECCCCCBHHHHTTCT-TCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT-
T ss_pred EEcCCCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCC-
Confidence 9999999999998754 345999999999999999999999999999999999999974 478999999999654311
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+...
T Consensus 205 ---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~ 257 (387)
T 1kob_A 205 ---------------------------EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE 257 (387)
T ss_dssp ---------------------------SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH
T ss_pred ---------------------------cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHH
Confidence 11123479999999999999999999999999999999999999999999888
Q ss_pred HHHHHHhCCCCCCC--CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCCh
Q 001869 906 TFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 963 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~--~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 963 (1002)
.+..+......++. ...++.++++||.+||+.||.+||| +.++|+||||++..+
T Consensus 258 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt----~~ell~hp~~~~~~~ 313 (387)
T 1kob_A 258 TLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLT----VHDALEHPWLKGDHS 313 (387)
T ss_dssp HHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCC----HHHHHTSTTTSSCCT
T ss_pred HHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcC----HHHHhhCccccCCcc
Confidence 88888877655543 3457899999999999999999999 999999999998544
No 57
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=4.3e-43 Score=384.47 Aligned_cols=257 Identities=31% Similarity=0.509 Sum_probs=207.9
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (1002)
..++|++++.||+|+||.||+|.+..+++.||+|++.............+.+|+.+++.++||||+++++++.+.+..++
T Consensus 11 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (275)
T 2eue_A 11 HIGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIM 90 (275)
T ss_dssp BCCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEE
T ss_pred cccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEE
Confidence 35689999999999999999999999999999999987655555556788899999999999999999999999999999
Q ss_pred EEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCC
Q 001869 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
||||+ +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 91 v~e~~-~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 165 (275)
T 2eue_A 91 VIEYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-- 165 (275)
T ss_dssp EEECC-CEEHHHHHHTS--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCSSCC--------
T ss_pred Eehhc-CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCChHhEEECCCCCEEEeecccceeccCc--
Confidence 99999 88898888764 45999999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCC-CChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001869 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
......+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.+.+...
T Consensus 166 --------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 219 (275)
T 2eue_A 166 --------------------------NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV 219 (275)
T ss_dssp -----------------------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred --------------------------ccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 11123469999999999988765 689999999999999999999999999888
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 906 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
....+......++. .++..+.+||.+||+.||.+||| +.++++||||+.
T Consensus 220 ~~~~~~~~~~~~~~--~~~~~~~~li~~~l~~dP~~Rps----~~e~l~h~~f~~ 268 (275)
T 2eue_A 220 LFKNISNGVYTLPK--FLSPGAAGLIKRMLIVNPLNRIS----IHEIMQDDWFKV 268 (275)
T ss_dssp HHHHHHHTCCCCCT--TSCHHHHHHHHHHSCSSGGGSCC----HHHHTTCHHHHT
T ss_pred HHHHHHhCCCCCCc--cCCHHHHHHHHHHhhcCHhHCCC----HHHHhhCCeecc
Confidence 88888887766654 47889999999999999999999 999999999986
No 58
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.7e-42 Score=381.19 Aligned_cols=265 Identities=28% Similarity=0.466 Sum_probs=234.0
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.++|++++.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccC-CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 4789999999999999999999999999999999986533 445567788999999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCc---EEEEeccCCcccCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH---VSLTDFDLSCLTSCK 824 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~---vkL~DFG~a~~~~~~ 824 (1002)
|||+.+++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++.++. +||+|||++......
T Consensus 84 ~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (284)
T 3kk8_A 84 FDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161 (284)
T ss_dssp ECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred EecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence 9999999999988765 45999999999999999999999999999999999999986655 999999998553211
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..
T Consensus 162 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~ 213 (284)
T 3kk8_A 162 ----------------------------EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH 213 (284)
T ss_dssp ----------------------------CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred ----------------------------ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh
Confidence 1122457999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHhCCCCCCC--CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhh
Q 001869 905 KTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVR 967 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~--~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~ 967 (1002)
.....+......++. ...++.++.+||.+||+.||.+||| +.++++||||+..++....
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~~l~h~~~~~~~~~~~~ 274 (284)
T 3kk8_A 214 RLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRIT----ADQALKVPWICNRERVASA 274 (284)
T ss_dssp HHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCC----HHHHTTSHHHHSCCCGGGS
T ss_pred HHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCC----HHHHhcCccccCChhHHhH
Confidence 888888877665543 3467899999999999999999999 9999999999997766553
No 59
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.7e-43 Score=396.89 Aligned_cols=264 Identities=22% Similarity=0.342 Sum_probs=214.7
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
...++|++++.||+|+||.||+|.+..+++.||||++.... ........+.+|+.+++.++||||+++++++.+.+.+|
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEH-EEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC---------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccc-cccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence 34579999999999999999999999999999999997653 23334456778999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEc-----cCCcEEEEeccCCcc
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-----GNGHVSLTDFDLSCL 820 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~-----~~g~vkL~DFG~a~~ 820 (1002)
+||||+. ++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..
T Consensus 110 lv~e~~~-~~L~~~~~~~--~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~ 186 (329)
T 3gbz_A 110 LIFEYAE-NDLKKYMDKN--PDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186 (329)
T ss_dssp EEEECCS-EEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred EEEecCC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence 9999996 5999999875 3599999999999999999999999999999999999995 445699999999865
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCC
Q 001869 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFR 899 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~ 899 (1002)
.... .......+||+.|+|||++.+. .++.++|||||||++|+|++|..||.
T Consensus 187 ~~~~---------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 239 (329)
T 3gbz_A 187 FGIP---------------------------IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFP 239 (329)
T ss_dssp HC--------------------------------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred cCCc---------------------------ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcC
Confidence 3211 1112345789999999999874 47999999999999999999999999
Q ss_pred CCChHHHHHHHHhCCCC-----C-------------CCC----------CCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001869 900 GKTRQKTFANILHKDLK-----F-------------PSS----------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 900 ~~~~~~~~~~i~~~~~~-----~-------------~~~----------~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
+.+..+.+..+...... + +.. ..++.++++||.+||+.||.+||| +++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e 315 (329)
T 3gbz_A 240 GDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRIS----AKN 315 (329)
T ss_dssp CSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCC----HHH
T ss_pred CCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCC----HHH
Confidence 99888877777542100 0 000 115788999999999999999999 999
Q ss_pred HHcCCCcCCCChh
Q 001869 952 IKKHPFFKGVNWA 964 (1002)
Q Consensus 952 lL~Hp~f~~~~~~ 964 (1002)
+|+||||++.+|+
T Consensus 316 ~l~hp~f~~~~~~ 328 (329)
T 3gbz_A 316 ALEHPYFSHNDFD 328 (329)
T ss_dssp HHTSGGGSSSCSC
T ss_pred HhCCcccCCCCCC
Confidence 9999999999885
No 60
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=3.5e-43 Score=386.01 Aligned_cols=260 Identities=34% Similarity=0.559 Sum_probs=229.4
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
++..++|++++.||+|+||.||+|.+..++..||+|++.............+.+|+.+++.++||||+++++++.+.+..
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 84 (279)
T 3fdn_A 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRV 84 (279)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred eeecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEE
Confidence 35578999999999999999999999999999999999765443444456788999999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||+++++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 85 ~lv~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~- 161 (279)
T 3fdn_A 85 YLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS- 161 (279)
T ss_dssp EEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCc-
Confidence 9999999999999999765 4599999999999999999999999999999999999999999999999998844221
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..
T Consensus 162 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~ 213 (279)
T 3fdn_A 162 ----------------------------SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 213 (279)
T ss_dssp ----------------------------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred ----------------------------ccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH
Confidence 1112357899999999999999999999999999999999999999999988
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
.....+......++. .++..+.+||.+||+.||.+||| +.++++||||+..
T Consensus 214 ~~~~~~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~Rps----~~e~l~h~~~~~~ 264 (279)
T 3fdn_A 214 ETYKRISRVEFTFPD--FVTEGARDLISRLLKHNPSQRPM----LREVLEHPWITAN 264 (279)
T ss_dssp HHHHHHHHTCCCCCT--TSCHHHHHHHHHHCCSSGGGSCC----HHHHHHCHHHHHH
T ss_pred HHHHHHHhCCCCCCC--cCCHHHHHHHHHHhccChhhCCC----HHHHhhCccccCC
Confidence 888888887766654 36889999999999999999999 9999999999873
No 61
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.1e-42 Score=390.52 Aligned_cols=266 Identities=29% Similarity=0.441 Sum_probs=233.5
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccCh---hHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR---NKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+.|++.+.||+|+||.||+|.+..+++.||+|++........ .....+.+|+.+++.++||||+++++++.+.+.+
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 4579999999999999999999999999999999986533221 1356788999999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCC----cEEEEeccCCcc
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG----HVSLTDFDLSCL 820 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g----~vkL~DFG~a~~ 820 (1002)
|+||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++..
T Consensus 91 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~ 168 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC--SCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEE
T ss_pred EEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCcccee
Confidence 9999999999999999764 4589999999999999999999999999999999999999887 799999999865
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001869 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
.... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+
T Consensus 169 ~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 220 (321)
T 2a2a_A 169 IEDG----------------------------VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220 (321)
T ss_dssp CCTT----------------------------CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred cCcc----------------------------ccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCC
Confidence 3311 111245699999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHhCCCCCCCC--CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhh
Q 001869 901 KTRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVR 967 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~~~--~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~ 967 (1002)
.+..+.+..+......++.. ..++..+.+||.+||+.||.+||| +.++++||||+.++|....
T Consensus 221 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~e~l~hp~~~~~~~~~~~ 285 (321)
T 2a2a_A 221 DTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLT----IQEALRHPWITPVDNQQAM 285 (321)
T ss_dssp SSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCC----HHHHHHSTTTSCSSHHHHH
T ss_pred CCHHHHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcC----HHHHhcCccccCCCccccc
Confidence 99888888887766555432 457889999999999999999999 9999999999999887653
No 62
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.7e-43 Score=398.60 Aligned_cols=287 Identities=41% Similarity=0.727 Sum_probs=234.3
Q ss_pred cccCCcccccccccCCcEEEEEEEEc---CCCeEEEEEEeeccccc-ChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEe
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVML-NRNKVHRACAEREILDML-DHPFVPALYASFQT 740 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~---~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~ 740 (1002)
+..++|++++.||+|+||.||+|.+. .+++.||||++++.... .......+.+|+.+++.+ +||||+++++++..
T Consensus 51 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 130 (355)
T 1vzo_A 51 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT 130 (355)
T ss_dssp CCGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE
T ss_pred ccccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEee
Confidence 45679999999999999999999984 58999999998764321 122334566799999999 79999999999999
Q ss_pred CCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcc
Q 001869 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
.+.+|+||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus 131 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 131 ETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp TTEEEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred CceEEEEeecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 99999999999999999999864 4599999999999999999999999999999999999999999999999999865
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC--CCCCChhhHHHHHHHHHHHHcCCCCC
Q 001869 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~--~~~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
.... ........+||+.|+|||++.+ ..++.++|||||||++|+|++|..||
T Consensus 209 ~~~~--------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf 262 (355)
T 1vzo_A 209 FVAD--------------------------ETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF 262 (355)
T ss_dssp CCGG--------------------------GGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTT
T ss_pred cccC--------------------------CCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence 3211 0111234679999999999986 34678999999999999999999999
Q ss_pred CCC----ChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCCh-hcHHHHHcCCCcCCCChhhhhccCCCC
Q 001869 899 RGK----TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPE 973 (1002)
Q Consensus 899 ~~~----~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~~~~ 973 (1002)
... ........+......++ ..++..+.+||.+||..||.+||++. +.++++++||||+.++|..+.....|.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~~~~~l~~~~~~~ 340 (355)
T 1vzo_A 263 TVDGEKNSQAEISRRILKSEPPYP--QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPA 340 (355)
T ss_dssp SCTTSCCCHHHHHHHHHHCCCCCC--TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCCHHHHHTTCSCC
T ss_pred ccCCccchHHHHHHHHhccCCCCC--cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcCChhHhhhccCCC
Confidence 753 33445555555554444 34788999999999999999999321 129999999999999999998777777
Q ss_pred CCCCCCCCc
Q 001869 974 LDAPLFATD 982 (1002)
Q Consensus 974 ~~~p~~~~~ 982 (1002)
...|.+...
T Consensus 341 p~~p~~~~~ 349 (355)
T 1vzo_A 341 PFKPVIRDE 349 (355)
T ss_dssp SCCCCCCC-
T ss_pred CCCCccccc
Confidence 777776543
No 63
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1e-42 Score=388.11 Aligned_cols=263 Identities=25% Similarity=0.395 Sum_probs=215.4
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeeccccc--ChhHHHHHHHHHHHHHhC---CCCCcceEEEEEEe
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--NRNKVHRACAEREILDML---DHPFVPALYASFQT 740 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~E~~il~~l---~hpnIv~l~~~~~~ 740 (1002)
+..++|++++.||+|+||.||+|.+..+++.||||++...... .......+.+|+.+++.+ +||||+++++++..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 4467999999999999999999999999999999998754221 111123455677777666 59999999999987
Q ss_pred CC-----eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEec
Q 001869 741 KT-----HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 815 (1002)
Q Consensus 741 ~~-----~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DF 815 (1002)
.. .+++||||+. ++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+||
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Df 164 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADF 164 (308)
T ss_dssp CCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSC
T ss_pred cCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeC
Confidence 55 5899999995 69999998766566999999999999999999999999999999999999999999999999
Q ss_pred cCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCC
Q 001869 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGY 895 (1002)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~ 895 (1002)
|++...... ......+||+.|+|||++.+..++.++|||||||++|+|++|.
T Consensus 165 g~a~~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~ 216 (308)
T 3g33_A 165 GLARIYSYQ----------------------------MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216 (308)
T ss_dssp SCTTTSTTC----------------------------CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSS
T ss_pred ccccccCCC----------------------------cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCC
Confidence 998653211 1123467999999999999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHHhCCC-----CCCC--------------------CCCCCHHHHHHHHHccccCcCCCCCChhcHH
Q 001869 896 TPFRGKTRQKTFANILHKDL-----KFPS--------------------STPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 950 (1002)
Q Consensus 896 ~Pf~~~~~~~~~~~i~~~~~-----~~~~--------------------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~ 950 (1002)
.||.+.+....+..+..... .++. ...++..+.+||.+||+.||.+||| +.
T Consensus 217 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~ 292 (308)
T 3g33_A 217 PLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRIS----AF 292 (308)
T ss_dssp CSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCC----HH
T ss_pred CCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCC----HH
Confidence 99999988888877764211 0110 1246788999999999999999999 99
Q ss_pred HHHcCCCcCCC
Q 001869 951 EIKKHPFFKGV 961 (1002)
Q Consensus 951 elL~Hp~f~~~ 961 (1002)
++|+||||+..
T Consensus 293 e~l~h~~~~~~ 303 (308)
T 3g33_A 293 RALQHSYLHKD 303 (308)
T ss_dssp HHHTSTTC---
T ss_pred HHhcCccccCC
Confidence 99999999974
No 64
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=4.6e-43 Score=392.93 Aligned_cols=265 Identities=24% Similarity=0.403 Sum_probs=207.6
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.++|++++.||+|+||.||+|.+..+++.||+|++.... .......+.+|+.+++.++||||+++++++...+.+|+|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 81 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS--EEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLV 81 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCS--TTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc--ccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEE
Confidence 468999999999999999999999999999999997643 222345677899999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCC----CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCC
Q 001869 748 TDYCPGGELFLLLDRQP----TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~----~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
|||+. ++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 82 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 160 (317)
T 2pmi_A 82 FEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGI 160 (317)
T ss_dssp EECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTS
T ss_pred EEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCC
Confidence 99996 69999987531 23589999999999999999999999999999999999999999999999999865421
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
. .......+||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+
T Consensus 161 ~---------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 213 (317)
T 2pmi_A 161 P---------------------------VNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTN 213 (317)
T ss_dssp C---------------------------CCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred C---------------------------cccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 1 011234578999999999976 468899999999999999999999999988
Q ss_pred hHHHHHHHHhC--CCC----------------C--------------CCCCCCCHHHHHHHHHccccCcCCCCCChhcHH
Q 001869 903 RQKTFANILHK--DLK----------------F--------------PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 950 (1002)
Q Consensus 903 ~~~~~~~i~~~--~~~----------------~--------------~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~ 950 (1002)
..+.+..+... ... + .....++.++.+||.+||+.||.+||| +.
T Consensus 214 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt----~~ 289 (317)
T 2pmi_A 214 DEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLS----AK 289 (317)
T ss_dssp HHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCC----HH
T ss_pred hHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCC----HH
Confidence 88777766531 000 0 001246789999999999999999999 99
Q ss_pred HHHcCCCcCCCChhhh
Q 001869 951 EIKKHPFFKGVNWALV 966 (1002)
Q Consensus 951 elL~Hp~f~~~~~~~~ 966 (1002)
++|+||||+...+...
T Consensus 290 e~l~hp~f~~~~~~~~ 305 (317)
T 2pmi_A 290 QALHHPWFAEYYHHAS 305 (317)
T ss_dssp HHTTSGGGGGGCC---
T ss_pred HHhCChhhhcccchhh
Confidence 9999999998665543
No 65
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=8.3e-43 Score=397.78 Aligned_cols=256 Identities=26% Similarity=0.433 Sum_probs=220.3
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-----CCCcceEEEEEE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-----HPFVPALYASFQ 739 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-----hpnIv~l~~~~~ 739 (1002)
.+..++|++++.||+|+||.||+|.+..+++.||||++... ......+..|+.+++.+. ||||+++++++.
T Consensus 31 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~ 106 (360)
T 3llt_A 31 MLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI----KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFM 106 (360)
T ss_dssp CEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEE
T ss_pred eEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc----hhhhhhhHHHHHHHHHhcccCCCCCCeecccceee
Confidence 34568999999999999999999999999999999998742 344566778999999986 999999999999
Q ss_pred eCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEcc-------------
Q 001869 740 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG------------- 806 (1002)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~------------- 806 (1002)
..+.+|+||||+ +++|.+++.......++...++.++.||+.||+|||++||+||||||+|||++.
T Consensus 107 ~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~ 185 (360)
T 3llt_A 107 YYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRV 185 (360)
T ss_dssp ETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECT
T ss_pred ECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhcc
Confidence 999999999999 999999998876667999999999999999999999999999999999999975
Q ss_pred ------------CCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCC
Q 001869 807 ------------NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG 874 (1002)
Q Consensus 807 ------------~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~ 874 (1002)
++.+||+|||++..... .....+||+.|+|||++.+..
T Consensus 186 ~~~~~~~~~~~~~~~~kl~DFG~a~~~~~------------------------------~~~~~~gt~~y~aPE~~~~~~ 235 (360)
T 3llt_A 186 TDGKKIQIYRTKSTGIKLIDFGCATFKSD------------------------------YHGSIINTRQYRAPEVILNLG 235 (360)
T ss_dssp TTCCEEEEEEESCCCEEECCCTTCEETTS------------------------------CCCSCCSCGGGCCHHHHTTCC
T ss_pred cccccccccccCCCCEEEEeccCceecCC------------------------------CCcCccCcccccCcHHHcCCC
Confidence 78999999999854321 112457999999999999999
Q ss_pred CCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCC--------------------------CC--------
Q 001869 875 HTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFP--------------------------SS-------- 920 (1002)
Q Consensus 875 ~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~--------------------------~~-------- 920 (1002)
++.++|||||||++|+|++|+.||.+.+..+.+..+.......| ..
T Consensus 236 ~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 315 (360)
T 3llt_A 236 WDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIK 315 (360)
T ss_dssp CCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHH
T ss_pred CCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhh
Confidence 99999999999999999999999999888777766654322221 10
Q ss_pred ----------CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcC
Q 001869 921 ----------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 959 (1002)
Q Consensus 921 ----------~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 959 (1002)
...+..+.+||.+||+.||.+||| +.++|+||||+
T Consensus 316 ~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt----a~elL~hp~f~ 360 (360)
T 3llt_A 316 HVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPS----PAELLKHKFLE 360 (360)
T ss_dssp HHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCC----HHHHTTSGGGC
T ss_pred hhhhcccccccchHHHHHHHHHHHhcCChhhCCC----HHHHhcCcccC
Confidence 012366789999999999999999 99999999996
No 66
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2.3e-43 Score=399.51 Aligned_cols=261 Identities=29% Similarity=0.462 Sum_probs=223.2
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~l 746 (1002)
.++|++++.||+|+||.||+|.+..+++.||||++.+... ...+|++++.++ +||||+++++++.+.+.+|+
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~l 93 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-------DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYV 93 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEE
Confidence 4689999999999999999999999999999999976532 234578888777 79999999999999999999
Q ss_pred EEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccC----CcEEEEeccCCcccC
Q 001869 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN----GHVSLTDFDLSCLTS 822 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~----g~vkL~DFG~a~~~~ 822 (1002)
|||||.||+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||+..+ +.+||+|||++....
T Consensus 94 v~E~~~gg~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~ 171 (342)
T 2qr7_A 94 VTELMKGGELLDKILRQ--KFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171 (342)
T ss_dssp EECCCCSCBHHHHHHTC--TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred EEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence 99999999999999764 459999999999999999999999999999999999998543 359999999986542
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC--
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG-- 900 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~-- 900 (1002)
.. .......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+
T Consensus 172 ~~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 224 (342)
T 2qr7_A 172 AE---------------------------NGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGP 224 (342)
T ss_dssp CT---------------------------TCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSST
T ss_pred CC---------------------------CCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCC
Confidence 11 0112346799999999999888888999999999999999999999986
Q ss_pred -CChHHHHHHHHhCCCCCCC--CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccC
Q 001869 901 -KTRQKTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMN 970 (1002)
Q Consensus 901 -~~~~~~~~~i~~~~~~~~~--~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~ 970 (1002)
.+..+.+..+..+.+.++. +..++.++++||.+||..||.+||| +.++++||||.. |..+....
T Consensus 225 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t----~~~il~hp~~~~--~~~~~~~~ 291 (342)
T 2qr7_A 225 DDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLT----AALVLRHPWIVH--WDQLPQYQ 291 (342)
T ss_dssp TSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCC----HHHHTTSHHHHT--GGGSCCSC
T ss_pred cCCHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcC----HHHHhcCCeecC--cccccccc
Confidence 4566777788777766553 3568999999999999999999999 999999999964 76664433
No 67
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=3.9e-43 Score=413.58 Aligned_cols=260 Identities=28% Similarity=0.474 Sum_probs=231.0
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+..++|++++.||+|+||.||+|.+..+|+.||||++.+...........+.+|+.+++.++||||+++++++...+.+
T Consensus 12 ~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~ 91 (476)
T 2y94_A 12 RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDI 91 (476)
T ss_dssp CCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred CceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence 45678999999999999999999999999999999999865433334456788999999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+|||||+|++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 92 ~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~ 169 (476)
T 2y94_A 92 FMVMEYVSGGELFDYICKN--GRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 169 (476)
T ss_dssp EEEEECCSSEEHHHHTTSS--SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTT
T ss_pred EEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhcccc
Confidence 9999999999999999764 45999999999999999999999999999999999999999999999999998654211
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCC-CChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+.
T Consensus 170 ----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~ 221 (476)
T 2y94_A 170 ----------------------------EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV 221 (476)
T ss_dssp ----------------------------CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS
T ss_pred ----------------------------ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH
Confidence 11234579999999999988765 6799999999999999999999999888
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 904 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
...+..+..+....|. .++.++.+||.+||+.||.+||| +.++++||||+.
T Consensus 222 ~~~~~~i~~~~~~~p~--~~s~~~~~Li~~~L~~dP~~Rpt----~~eil~hp~~~~ 272 (476)
T 2y94_A 222 PTLFKKICDGIFYTPQ--YLNPSVISLLKHMLQVDPMKRAT----IKDIREHEWFKQ 272 (476)
T ss_dssp HHHHHHHHTTCCCCCT--TCCHHHHHHHHHHTCSSTTTSCC----HHHHHTCHHHHT
T ss_pred HHHHHHHhcCCcCCCc--cCCHHHHHHHHHHcCCCchhCcC----HHHHHhCHHhhh
Confidence 8888888887665543 47889999999999999999999 999999999986
No 68
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=7e-43 Score=385.71 Aligned_cols=258 Identities=24% Similarity=0.406 Sum_probs=214.0
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||+|+||.||+|.+ .+++.||+|++..... .......+.+|+.+++.++||||+++++++...+.+|+||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKE-DEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVF 79 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSG-GGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEecccc-ccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEE
Confidence 5899999999999999999999 6789999999875432 2223456788999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+. ++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 80 e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 153 (288)
T 1ob3_A 80 EHLD-QDLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP---- 153 (288)
T ss_dssp ECCS-EEHHHHHHTS-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred EecC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCcc----
Confidence 9996 5999988764 245999999999999999999999999999999999999999999999999998543211
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
........||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+.+
T Consensus 154 -----------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~ 210 (288)
T 1ob3_A 154 -----------------------VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQL 210 (288)
T ss_dssp -------------------------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred -----------------------ccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 0112234789999999999764 5889999999999999999999999998887777
Q ss_pred HHHHhC--CC---CCC----------------------CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 908 ANILHK--DL---KFP----------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 908 ~~i~~~--~~---~~~----------------------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
..+... .. .++ ....++..+.+||.+||+.||.+||| +.++++||||+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~e~l~hp~f~~ 286 (288)
T 1ob3_A 211 MRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRIT----AKQALEHAYFKE 286 (288)
T ss_dssp HHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCC----HHHHHTSGGGGC
T ss_pred HHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCC----HHHHhcCcchhh
Confidence 666541 10 000 01246888999999999999999999 999999999987
Q ss_pred C
Q 001869 961 V 961 (1002)
Q Consensus 961 ~ 961 (1002)
.
T Consensus 287 ~ 287 (288)
T 1ob3_A 287 N 287 (288)
T ss_dssp -
T ss_pred c
Confidence 4
No 69
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=5.9e-43 Score=412.27 Aligned_cols=255 Identities=24% Similarity=0.453 Sum_probs=212.6
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 741 (1002)
.++|++++.||+|+||.||+|.+..+++.||||++.+. .........+.+|+.+++.++||||+++++++...
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~-~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESG-GGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECcc-ccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 57899999999999999999999999999999999865 33555677888999999999999999999999654
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
..+|+|||||. ++|.+.+.. .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..
T Consensus 140 ~~~~lv~E~~~-~~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 214 (464)
T 3ttj_A 140 QDVYLVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 214 (464)
T ss_dssp CEEEEEEECCS-EEHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC---
T ss_pred CeEEEEEeCCC-CCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeec
Confidence 46799999995 457777643 3899999999999999999999999999999999999999999999999999653
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
... ......+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.
T Consensus 215 ~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~ 266 (464)
T 3ttj_A 215 GTS----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 266 (464)
T ss_dssp --C----------------------------CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCC----------------------------cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 211 1123468999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHhCC----------------------CCCCCC------CC------------CCHHHHHHHHHccccCcCC
Q 001869 902 TRQKTFANILHKD----------------------LKFPSS------TP------------TSLHAKQLMYRLLHRDPKS 941 (1002)
Q Consensus 902 ~~~~~~~~i~~~~----------------------~~~~~~------~~------------~s~~~~~Ll~~~L~~dP~~ 941 (1002)
+..+.+..++... ..+... .. .+.++++||.+||.+||.+
T Consensus 267 ~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~ 346 (464)
T 3ttj_A 267 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 346 (464)
T ss_dssp SHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTT
T ss_pred CHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhh
Confidence 8887777765421 000000 00 1457899999999999999
Q ss_pred CCCChhcHHHHHcCCCcCC
Q 001869 942 RLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 942 Rpt~~~~a~elL~Hp~f~~ 960 (1002)
||| ++++|+||||+.
T Consensus 347 R~t----a~e~L~Hp~~~~ 361 (464)
T 3ttj_A 347 RIS----VDDALQHPYINV 361 (464)
T ss_dssp SCC----HHHHHTSTTTGG
T ss_pred CCC----HHHHhcChhhhh
Confidence 999 999999999995
No 70
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.5e-42 Score=387.02 Aligned_cols=265 Identities=27% Similarity=0.400 Sum_probs=217.7
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.++|++++.||+|+||.||+|.+..+++.||+|++.... ........+.+|+.+++.++||||+++++++...+..|+|
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE-DDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLV 80 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCC-C-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccc-cchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEE
Confidence 468999999999999999999999999999999987642 3344566788999999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+++++|.+++... ..+++..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++......
T Consensus 81 ~e~~~~~~l~~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 155 (311)
T 4agu_A 81 FEYCDHTVLHELDRYQ--RGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGP--- 155 (311)
T ss_dssp EECCSEEHHHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred EEeCCCchHHHHHhhh--cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc---
Confidence 9999999999988764 45999999999999999999999999999999999999999999999999998654311
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
.......+||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+.
T Consensus 156 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~ 211 (311)
T 4agu_A 156 ------------------------SDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ 211 (311)
T ss_dssp ----------------------------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred ------------------------ccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 111234578999999999976 6678999999999999999999999999887766
Q ss_pred HHHHHhC-------------------CCCCCC----------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCC
Q 001869 907 FANILHK-------------------DLKFPS----------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 957 (1002)
Q Consensus 907 ~~~i~~~-------------------~~~~~~----------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~ 957 (1002)
...+... ....+. ...++..+.+||.+||+.||.+||| ++++++|||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell~hp~ 287 (311)
T 4agu_A 212 LYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLT----CEQLLHHPY 287 (311)
T ss_dssp HHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCC----HHHHHTSGG
T ss_pred HHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCC----HHHHhcChH
Confidence 6554321 111111 1346788999999999999999999 999999999
Q ss_pred cCCCChhhh
Q 001869 958 FKGVNWALV 966 (1002)
Q Consensus 958 f~~~~~~~~ 966 (1002)
|+++.+-..
T Consensus 288 f~~~~~~~~ 296 (311)
T 4agu_A 288 FENIREIED 296 (311)
T ss_dssp GTTCC----
T ss_pred HHhccCHHH
Confidence 999866543
No 71
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2e-42 Score=393.06 Aligned_cols=258 Identities=32% Similarity=0.493 Sum_probs=211.0
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (1002)
..+.|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+|+.+++.++||||+++++++...+.+|+
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 125 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISL 125 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC---------------CHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEE
Confidence 3468999999999999999999999999999999987542 33567789999999999999999999999999999
Q ss_pred EEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEcc---CCcEEEEeccCCcccCC
Q 001869 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~---~g~vkL~DFG~a~~~~~ 823 (1002)
||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++.....
T Consensus 126 v~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 203 (349)
T 2w4o_A 126 VLELVTGGELFDRIVEK--GYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH 203 (349)
T ss_dssp EECCCCSCBHHHHHTTC--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred EEEeCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence 99999999999999764 45999999999999999999999999999999999999975 88999999999864321
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
. ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+...
T Consensus 204 ~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 255 (349)
T 2w4o_A 204 Q----------------------------VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERG 255 (349)
T ss_dssp -------------------------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTC
T ss_pred c----------------------------cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcc
Confidence 1 112245799999999999999999999999999999999999999987655
Q ss_pred HH-HHHHHHhCCCCCCC--CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCCh
Q 001869 904 QK-TFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 963 (1002)
Q Consensus 904 ~~-~~~~i~~~~~~~~~--~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 963 (1002)
.. .+..+......++. ...++.++.+||.+||+.||.+||| +.++|+||||++...
T Consensus 256 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~e~l~hp~~~~~~~ 314 (349)
T 2w4o_A 256 DQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLT----TFQALQHPWVTGKAA 314 (349)
T ss_dssp HHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCC----HHHHHHSTTTTSTTC
T ss_pred cHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcC----HHHHhcCcccCCCcc
Confidence 44 56666666554433 3567899999999999999999999 999999999997543
No 72
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.1e-42 Score=383.18 Aligned_cols=259 Identities=31% Similarity=0.549 Sum_probs=230.0
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+..++|++.+.||+|+||.||+|.+..+++.||+|++.............+.+|+.+++.++||||+++++++.+.+..
T Consensus 10 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 89 (284)
T 2vgo_A 10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRI 89 (284)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred chhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEE
Confidence 35567999999999999999999999999999999999765333333456788999999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.....
T Consensus 90 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~- 166 (284)
T 2vgo_A 90 YLMLEFAPRGELYKELQKH--GRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS- 166 (284)
T ss_dssp EEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSS-
T ss_pred EEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCcc-
Confidence 9999999999999999865 3589999999999999999999999999999999999999999999999999854321
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
.......|++.|+|||++.+..++.++|||||||++|+|++|..||...+..
T Consensus 167 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 218 (284)
T 2vgo_A 167 ----------------------------LRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT 218 (284)
T ss_dssp ----------------------------SCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred ----------------------------cccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh
Confidence 1122457999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
.....+......++. .++..+++||.+||+.||.+||| +.++++||||+.
T Consensus 219 ~~~~~~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~Rps----~~~ll~h~~~~~ 268 (284)
T 2vgo_A 219 ETHRRIVNVDLKFPP--FLSDGSKDLISKLLRYHPPQRLP----LKGVMEHPWVKA 268 (284)
T ss_dssp HHHHHHHTTCCCCCT--TSCHHHHHHHHHHSCSSGGGSCC----HHHHHTCHHHHH
T ss_pred HHHHHHhccccCCCC--cCCHHHHHHHHHHhhcCHhhCCC----HHHHhhCHHHHh
Confidence 888888877766654 46889999999999999999999 999999999985
No 73
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1e-42 Score=402.76 Aligned_cols=253 Identities=25% Similarity=0.440 Sum_probs=209.4
Q ss_pred cCCcccc-cccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHH-HhCCCCCcceEEEEEEe----C
Q 001869 668 LQHFRPI-KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREIL-DMLDHPFVPALYASFQT----K 741 (1002)
Q Consensus 668 ~~~y~i~-~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il-~~l~hpnIv~l~~~~~~----~ 741 (1002)
.++|.+. +.||+|+||.||+|.+..+++.||||++... ..+.+|+.++ +.++||||++++++|.. .
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~--------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~ 131 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAGR 131 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc--------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCC
Confidence 4678887 7899999999999999999999999998642 3456788887 45589999999999875 6
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEcc---CCcEEEEeccCC
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLS 818 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~---~g~vkL~DFG~a 818 (1002)
..+|+|||||.||+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++
T Consensus 132 ~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a 211 (400)
T 1nxk_A 132 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211 (400)
T ss_dssp EEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred cEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccc
Confidence 78999999999999999998765557999999999999999999999999999999999999997 789999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCC
Q 001869 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
...... ......+||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus 212 ~~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf 263 (400)
T 1nxk_A 212 KETTSH----------------------------NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263 (400)
T ss_dssp EECC---------------------------------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSC
T ss_pred cccCCC----------------------------CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCC
Confidence 643211 1123467999999999999999999999999999999999999999
Q ss_pred CCCChHH----HHHHHHhCCCCCCC--CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 899 RGKTRQK----TFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 899 ~~~~~~~----~~~~i~~~~~~~~~--~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
.+..... ....+..+.+.++. +..++.++++||.+||+.||.+||| +.++++||||..
T Consensus 264 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt----~~eil~hp~~~~ 327 (400)
T 1nxk_A 264 YSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWIMQ 327 (400)
T ss_dssp CCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCC----HHHHHHSHHHHT
T ss_pred CCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcC----HHHHhcCccccC
Confidence 8754322 34455555555443 3568999999999999999999999 999999999986
No 74
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=2.2e-42 Score=389.20 Aligned_cols=266 Identities=27% Similarity=0.433 Sum_probs=230.3
Q ss_pred CCcccc-cccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEE
Q 001869 669 QHFRPI-KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 669 ~~y~i~-~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~l 746 (1002)
+.|.+. +.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.+++.+ +||||+++++++...+.+|+
T Consensus 28 ~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~l 106 (327)
T 3lm5_A 28 NFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR-GQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIIL 106 (327)
T ss_dssp HHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEET-TEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhc-chHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEE
Confidence 567777 899999999999999999999999999986532 233456788999999999 56999999999999999999
Q ss_pred EEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEcc---CCcEEEEeccCCcccCC
Q 001869 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~---~g~vkL~DFG~a~~~~~ 823 (1002)
||||+.+++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++. ++.+||+|||++.....
T Consensus 107 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 186 (327)
T 3lm5_A 107 ILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGH 186 (327)
T ss_dssp EEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC--
T ss_pred EEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCC
Confidence 999999999999987655567999999999999999999999999999999999999997 78999999999865421
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
. ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.
T Consensus 187 ~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~ 238 (327)
T 3lm5_A 187 A----------------------------CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN 238 (327)
T ss_dssp -----------------------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred c----------------------------cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc
Confidence 1 111235799999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHhCCCCCCC--CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhh
Q 001869 904 QKTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVR 967 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~~--~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~ 967 (1002)
...+..+......++. ...++..+.+||.+||+.||.+||| ++++|+||||+.++|..+.
T Consensus 239 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~~ll~h~~~~~~~~~~~~ 300 (327)
T 3lm5_A 239 QETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPT----AEICLSHSWLQQWDFENLF 300 (327)
T ss_dssp HHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCC----HHHHTTCGGGCCCCTTCC-
T ss_pred hHHHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcC----HHHHhCCHhhccccccccc
Confidence 8888888776554443 3567899999999999999999999 9999999999999998763
No 75
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=8.3e-43 Score=399.72 Aligned_cols=261 Identities=26% Similarity=0.435 Sum_probs=223.0
Q ss_pred Cccc--ccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 670 HFRP--IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 670 ~y~i--~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.|.+ .+.||+|+||.||+|.+..+|+.||+|++... .......+.+|+.+++.++||||+++++++...+.+|+|
T Consensus 88 ~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 164 (373)
T 2x4f_A 88 FYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTR---GMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLV 164 (373)
T ss_dssp TEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECC---SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEccc---ccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 4554 67899999999999999999999999999764 234556788999999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEE--ccCCcEEEEeccCCcccCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL--QGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl--~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
||||++++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 165 ~E~~~~~~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~- 242 (373)
T 2x4f_A 165 MEYVDGGELFDRIIDE-SYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR- 242 (373)
T ss_dssp EECCTTCEEHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTT-
T ss_pred EeCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCc-
Confidence 9999999999988754 2458999999999999999999999999999999999999 45679999999999654311
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+
T Consensus 243 ---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~ 295 (373)
T 2x4f_A 243 ---------------------------EKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE 295 (373)
T ss_dssp ---------------------------CBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred ---------------------------cccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 11223469999999999999889999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCC--CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhh
Q 001869 906 TFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 966 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~--~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~ 966 (1002)
.+..+......++. ...++.++++||.+||+.||.+||| +.++|+||||+..++...
T Consensus 296 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps----~~e~l~hp~~~~~~~~~~ 354 (373)
T 2x4f_A 296 TLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRIS----ASEALKHPWLSDHKLHSR 354 (373)
T ss_dssp HHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCC----HHHHHHSHHHHCHHHHHH
T ss_pred HHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCC----HHHHhcCcCcCCCchhhh
Confidence 88898887665543 2457899999999999999999999 999999999998766533
No 76
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-42 Score=396.16 Aligned_cols=259 Identities=29% Similarity=0.446 Sum_probs=215.2
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 741 (1002)
.++|++++.||+|+||.||+|.+..+|+.||||++.... ........+.+|+.+++.++||||+++++++...
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 478999999999999999999999999999999987642 3455567888999999999999999999999765
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
..+|+||||+ +++|.+++.. ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++...
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 178 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQA 178 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred ceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence 3469999999 8999999976 35899999999999999999999999999999999999999999999999998653
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
.. .....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+
T Consensus 179 ~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 228 (367)
T 1cm8_A 179 DS------------------------------EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKG 228 (367)
T ss_dssp CS------------------------------SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cc------------------------------ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCC
Confidence 21 1123578999999999987 6789999999999999999999999999
Q ss_pred CChHHHHHHHHhCCCC----------------------------CC-CCCCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001869 901 KTRQKTFANILHKDLK----------------------------FP-SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~----------------------------~~-~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
.+....+..+...... +. .....++.+.+||.+||+.||.+||| +.+
T Consensus 229 ~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t----~~e 304 (367)
T 1cm8_A 229 SDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVT----AGE 304 (367)
T ss_dssp SSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCC----HHH
T ss_pred CCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCC----HHH
Confidence 8887777766542100 00 11346889999999999999999999 999
Q ss_pred HHcCCCcCCCChhh
Q 001869 952 IKKHPFFKGVNWAL 965 (1002)
Q Consensus 952 lL~Hp~f~~~~~~~ 965 (1002)
+|+||||+.+....
T Consensus 305 ~l~hp~f~~~~~~~ 318 (367)
T 1cm8_A 305 ALAHPYFESLHDTE 318 (367)
T ss_dssp HHHSGGGTTTC---
T ss_pred HhcChHHHhhcCCc
Confidence 99999999876543
No 77
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=3.8e-42 Score=390.60 Aligned_cols=256 Identities=26% Similarity=0.368 Sum_probs=225.6
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
+.|++++.||+|+||.||+|.+..+++.||||++.............+.+|+.+++.++||||+++++++...+..|+||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 46999999999999999999999999999999998654444555678889999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+. |+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 134 e~~~-g~l~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~----- 206 (348)
T 1u5q_A 134 EYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP----- 206 (348)
T ss_dssp ECCS-EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS-----
T ss_pred ecCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCC-----
Confidence 9995 6888887643 24699999999999999999999999999999999999999999999999999854321
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCccccccccc---CCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
....+||+.|+|||++. ...++.++|||||||++|+|++|..||.+.+...
T Consensus 207 --------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~ 260 (348)
T 1u5q_A 207 --------------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS 260 (348)
T ss_dssp --------------------------BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH
T ss_pred --------------------------CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 12357999999999985 5678889999999999999999999999988888
Q ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 906 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
.+..+.....+......++..+.+||.+||+.||.+||| ++++++||||...
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps----~~~ll~h~~~~~~ 312 (348)
T 1u5q_A 261 ALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPT----SEVLLKHRFVLRE 312 (348)
T ss_dssp HHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHTTCHHHHSC
T ss_pred HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcC----HHHHhhChhhhcc
Confidence 887777766555555567899999999999999999999 9999999999763
No 78
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=6.7e-42 Score=400.23 Aligned_cols=297 Identities=21% Similarity=0.328 Sum_probs=219.7
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC-----C
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-----T 742 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-----~ 742 (1002)
.++|++++.||+|+||.||+|.+..+++.||||++... ........++.+|+.+|+.++||||+++++++... +
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~-~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRM-FEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECST-TTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCch-hcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 47899999999999999999999999999999999764 34556677889999999999999999999999765 5
Q ss_pred eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccC
Q 001869 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
.+|+||||+ +++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~--~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~ 180 (432)
T 3n9x_A 104 ELYIVLEIA-DSDLKKLFKTP--IFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180 (432)
T ss_dssp CEEEEEECC-SEEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC-
T ss_pred eEEEEEecC-CcCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCccccc
Confidence 799999999 56999999764 459999999999999999999999999999999999999999999999999997654
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccc-cCCCCCChhhHHHHHHHHHHHHc--------
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII-AGAGHTSAVDWWALGILLYEMLY-------- 893 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l-~~~~~~~~sDIwSlGvil~ellt-------- 893 (1002)
............. ..................+||+.|+|||++ ....++.++|||||||++|+|++
T Consensus 181 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~ 255 (432)
T 3n9x_A 181 SEKDTNIVNDLEE-----NEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHIND 255 (432)
T ss_dssp -----------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSS
T ss_pred ccccccccccccc-----cccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccc
Confidence 3211100000000 000000000001123567899999999986 55678999999999999999998
Q ss_pred ---CCCCCCCCC-----------------hHHHHHHHHh------------------------CCCCCCC-----CCCCC
Q 001869 894 ---GYTPFRGKT-----------------RQKTFANILH------------------------KDLKFPS-----STPTS 924 (1002)
Q Consensus 894 ---G~~Pf~~~~-----------------~~~~~~~i~~------------------------~~~~~~~-----~~~~s 924 (1002)
|.++|.+.+ ....+..+.. .....+. ...++
T Consensus 256 ~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 335 (432)
T 3n9x_A 256 PTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSIS 335 (432)
T ss_dssp GGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSC
T ss_pred cccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCC
Confidence 445554433 1122222211 0111110 13478
Q ss_pred HHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhccCCCCCCCC
Q 001869 925 LHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAP 977 (1002)
Q Consensus 925 ~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p 977 (1002)
+++.+||.+||+.||.+||| ++++|+||||+++.|.........+...|
T Consensus 336 ~~~~dLl~~mL~~dP~~R~t----a~e~L~Hp~f~~~~~~~~e~~~~~~~~~~ 384 (432)
T 3n9x_A 336 DDGINLLESMLKFNPNKRIT----IDQALDHPYLKDVRKKKLENFSTKKIILP 384 (432)
T ss_dssp HHHHHHHHHHSCSSTTTSCC----HHHHHTCGGGTTTCCTTTC---CCCCCCS
T ss_pred HHHHHHHHHHhcCCcccCCC----HHHHhcChhhhhccCcccCcCCCCCCCCC
Confidence 89999999999999999999 99999999999999987755444433333
No 79
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=3.3e-42 Score=385.24 Aligned_cols=268 Identities=29% Similarity=0.458 Sum_probs=215.3
Q ss_pred cCCcccc-cccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEE
Q 001869 668 LQHFRPI-KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 668 ~~~y~i~-~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~ 745 (1002)
.+.|++. +.||+|+||.||+|.+..+++.||||++.... ......+.+|+.++.++ +||||+++++++.+.+.+|
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~ 87 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP---GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFY 87 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS---SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc---chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEE
Confidence 4689885 78999999999999999999999999997642 23456788899999885 7999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCc---EEEEeccCCcccC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH---VSLTDFDLSCLTS 822 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~---vkL~DFG~a~~~~ 822 (1002)
+||||+++++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++. +||+|||++....
T Consensus 88 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 165 (316)
T 2ac3_A 88 LVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK 165 (316)
T ss_dssp EEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---
T ss_pred EEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccc
Confidence 999999999999999875 45999999999999999999999999999999999999998765 9999999986543
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-----CCCCChhhHHHHHHHHHHHHcCCCC
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----~~~~~~sDIwSlGvil~elltG~~P 897 (1002)
...... ..........+||+.|+|||++.+ ..++.++|||||||++|+|++|..|
T Consensus 166 ~~~~~~--------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~p 225 (316)
T 2ac3_A 166 LNGDCS--------------------PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225 (316)
T ss_dssp ------------------------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCS
T ss_pred cCCccc--------------------cccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCC
Confidence 111000 000111234579999999999975 4578899999999999999999999
Q ss_pred CCCCC---------------hHHHHHHHHhCCCCCCCC--CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 898 FRGKT---------------RQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 898 f~~~~---------------~~~~~~~i~~~~~~~~~~--~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
|.+.. ....+..+......++.. ..++..+++||.+||+.||.+||| +.++++||||++
T Consensus 226 f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps----~~e~l~hp~~~~ 301 (316)
T 2ac3_A 226 FVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLS----AAQVLQHPWVQG 301 (316)
T ss_dssp CCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCC----HHHHHHSTTCC-
T ss_pred CcccccccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCC----HHHHhcChhhcC
Confidence 98754 234556666666665532 457889999999999999999999 999999999998
Q ss_pred CChh
Q 001869 961 VNWA 964 (1002)
Q Consensus 961 ~~~~ 964 (1002)
..+.
T Consensus 302 ~~~~ 305 (316)
T 2ac3_A 302 CAPE 305 (316)
T ss_dssp ----
T ss_pred CCCc
Confidence 6554
No 80
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=6.1e-42 Score=384.54 Aligned_cols=256 Identities=29% Similarity=0.467 Sum_probs=223.7
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
.|...+.||+|+||.||+|.+..+|+.||||++.... ......+.+|+.+++.++||||+++++++...+..|+|||
T Consensus 46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 122 (321)
T 2c30_A 46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLME 122 (321)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT---CCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc---hhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence 4777789999999999999999999999999997543 2334667889999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCC
Q 001869 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 829 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~ 829 (1002)
|++|++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 123 ~~~~~~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~----- 194 (321)
T 2c30_A 123 FLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD----- 194 (321)
T ss_dssp CCCSCBHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSS-----
T ss_pred cCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccC-----
Confidence 9999999999865 35999999999999999999999999999999999999999999999999998654311
Q ss_pred CcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001869 830 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 909 (1002)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~ 909 (1002)
........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..
T Consensus 195 ----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~ 252 (321)
T 2c30_A 195 ----------------------VPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKR 252 (321)
T ss_dssp ----------------------SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH
T ss_pred ----------------------ccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 0112345799999999999999999999999999999999999999999888887777
Q ss_pred HHhCCCC-CCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCC
Q 001869 910 ILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 910 i~~~~~~-~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 962 (1002)
+.....+ +.....++..+.+||.+||+.||.+||| +.++++||||....
T Consensus 253 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~hp~~~~~~ 302 (321)
T 2c30_A 253 LRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERAT----AQELLDHPFLLQTG 302 (321)
T ss_dssp HHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCC----HHHHHTSGGGGGCC
T ss_pred HhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcC----HHHHhcChhhccCC
Confidence 7665432 2333457889999999999999999999 99999999998643
No 81
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=7.4e-43 Score=414.65 Aligned_cols=263 Identities=29% Similarity=0.456 Sum_probs=232.4
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
+..++|++++.||+|+||.||+|.+..+++.||||++.+...........+.+|+.+++.++||||+++++++.+.+.+|
T Consensus 23 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 102 (484)
T 3nyv_A 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFY 102 (484)
T ss_dssp CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred cccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 34568999999999999999999999999999999998765544556678899999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEE---ccCCcEEEEeccCCcccC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL---QGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl---~~~g~vkL~DFG~a~~~~ 822 (1002)
+|||||.|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++....
T Consensus 103 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 180 (484)
T 3nyv_A 103 LVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180 (484)
T ss_dssp EEECCCCSCBHHHHHHTC--SCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred EEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence 999999999999999764 459999999999999999999999999999999999999 467899999999986543
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
.. ......+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+
T Consensus 181 ~~----------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~ 231 (484)
T 3nyv_A 181 AS----------------------------KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN 231 (484)
T ss_dssp CC----------------------------CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cc----------------------------cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCC
Confidence 11 11224579999999999976 58899999999999999999999999999
Q ss_pred hHHHHHHHHhCCCCCC--CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCCh
Q 001869 903 RQKTFANILHKDLKFP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 963 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~~~--~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 963 (1002)
..+.+..+..+...++ .+..++..+++||.+||+.||.+||| +.++|+||||+...+
T Consensus 232 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s----~~e~l~h~~~~~~~~ 290 (484)
T 3nyv_A 232 EYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRIS----ARDALDHEWIQTYTK 290 (484)
T ss_dssp HHHHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCC----HHHHHTSHHHHHHTC
T ss_pred HHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcC----HHHHhhChhhccccc
Confidence 9999999988766544 34568899999999999999999999 999999999987543
No 82
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.4e-42 Score=380.92 Aligned_cols=260 Identities=31% Similarity=0.538 Sum_probs=200.8
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.++|++.+.||+|+||.||+|.+..+++.||||++.............+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 35899999999999999999999999999999999765433333456788999999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 90 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~--- 165 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNR-VKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP--- 165 (278)
T ss_dssp EECCTTEEHHHHHHTC-SSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-----
T ss_pred EecCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCC---
Confidence 9999999999999764 356999999999999999999999999999999999999999999999999998653211
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
........||+.|+|||++.+..++.++|||||||++|+|++|..||........+
T Consensus 166 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~ 221 (278)
T 3cok_A 166 ------------------------HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL 221 (278)
T ss_dssp --------------------------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---
T ss_pred ------------------------CCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH
Confidence 01112357899999999999988999999999999999999999999887665555
Q ss_pred HHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 908 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 908 ~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
..+.......+ ..++.++.+||.+||+.||.+||| +.++++||||+..
T Consensus 222 ~~~~~~~~~~~--~~~~~~~~~li~~~l~~dp~~Rps----~~~~l~h~~~~~~ 269 (278)
T 3cok_A 222 NKVVLADYEMP--SFLSIEAKDLIHQLLRRNPADRLS----LSSVLDHPFMSRN 269 (278)
T ss_dssp --CCSSCCCCC--TTSCHHHHHHHHHHSCSSGGGSCC----HHHHTTSTTTC--
T ss_pred HHHhhcccCCc--cccCHHHHHHHHHHcccCHhhCCC----HHHHhcCccccCC
Confidence 55544444333 347889999999999999999999 9999999999874
No 83
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.2e-42 Score=393.92 Aligned_cols=270 Identities=29% Similarity=0.448 Sum_probs=226.0
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeeccccc--ChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
.++|++++.||+|+||.||+|.+..+++.||+|++.+.... .......+.+|+.+++.++||||+++++++.+.+..|
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 104 (345)
T 3hko_A 25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYIC 104 (345)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEE
Confidence 36899999999999999999999999999999999765322 3445678899999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhC--------------------------------------CCCCCCHHHHHHHHHHHHHHHHHH
Q 001869 746 LITDYCPGGELFLLLDRQ--------------------------------------PTKVLKEDAVRFYAAEVVVALEYL 787 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~--------------------------------------~~~~l~~~~i~~i~~qil~aL~yL 787 (1002)
+|||||+|++|.+++... ....+++..++.++.||+.||+||
T Consensus 105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L 184 (345)
T 3hko_A 105 LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL 184 (345)
T ss_dssp EEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 999999999999998521 011246788899999999999999
Q ss_pred HHcCcccCCCCCCCEEEccCC--cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCccc
Q 001869 788 HCQGIIYRDLKPENVLLQGNG--HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYI 865 (1002)
Q Consensus 788 H~~gIiHrDLKP~NILl~~~g--~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~ 865 (1002)
|++||+||||||+|||++.++ .+||+|||++......... .........||+.|+
T Consensus 185 H~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~-----------------------~~~~~~~~~gt~~y~ 241 (345)
T 3hko_A 185 HNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNG-----------------------EYYGMTTKAGTPYFV 241 (345)
T ss_dssp HHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC-------------------------------CCCGGGC
T ss_pred HHCCccccCCChhhEEEecCCCceEEEeeccccccccccCcc-----------------------ccccccccCCCcccc
Confidence 999999999999999998776 8999999999654211100 001123457999999
Q ss_pred ccccccC--CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCC--CCCCHHHHHHHHHccccCcCC
Q 001869 866 APEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKS 941 (1002)
Q Consensus 866 aPE~l~~--~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~--~~~s~~~~~Ll~~~L~~dP~~ 941 (1002)
|||++.+ ..++.++|||||||++|+|++|..||.+.+..+....+......++.. ..++..+.+||.+||+.||.+
T Consensus 242 aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 321 (345)
T 3hko_A 242 APEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDE 321 (345)
T ss_dssp CHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTT
T ss_pred CchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhH
Confidence 9999975 678889999999999999999999999999999888888877655443 347889999999999999999
Q ss_pred CCCChhcHHHHHcCCCcCCCChh
Q 001869 942 RLGSHEGANEIKKHPFFKGVNWA 964 (1002)
Q Consensus 942 Rpt~~~~a~elL~Hp~f~~~~~~ 964 (1002)
||| +.++|+||||+.+.+.
T Consensus 322 Rps----~~~~l~hp~~~~~~~~ 340 (345)
T 3hko_A 322 RFD----AMRALQHPWISQFSDK 340 (345)
T ss_dssp SCC----HHHHHHSHHHHTTSSC
T ss_pred CCC----HHHHhcChhhccChHh
Confidence 999 9999999999987554
No 84
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.1e-41 Score=377.59 Aligned_cols=267 Identities=30% Similarity=0.443 Sum_probs=228.3
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeeccccc------ChhHHHHHHHHHHHHHhCC-CCCcceEEEEEEe
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML------NRNKVHRACAEREILDMLD-HPFVPALYASFQT 740 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~------~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~ 740 (1002)
.++|++.+.||+|+||.||+|.+..+++.||||++...... .......+.+|+.+++++. ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 57999999999999999999999999999999999754211 1233456788999999995 9999999999999
Q ss_pred CCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcc
Q 001869 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
.+..|+||||+++++|.+++... ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||++..
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 173 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ 173 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred CCeEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhh
Confidence 99999999999999999999864 4599999999999999999999999999999999999999999999999999865
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCccccccccc------CCCCCChhhHHHHHHHHHHHHcC
Q 001869 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA------GAGHTSAVDWWALGILLYEMLYG 894 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~------~~~~~~~sDIwSlGvil~elltG 894 (1002)
.... .......||+.|+|||++. ...++.++|||||||++|+|++|
T Consensus 174 ~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g 225 (298)
T 1phk_A 174 LDPG----------------------------EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225 (298)
T ss_dssp CCTT----------------------------CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHS
T ss_pred cCCC----------------------------cccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHC
Confidence 4311 1122357899999999985 45678899999999999999999
Q ss_pred CCCCCCCChHHHHHHHHhCCCCCCCC--CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhhhc
Q 001869 895 YTPFRGKTRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRC 968 (1002)
Q Consensus 895 ~~Pf~~~~~~~~~~~i~~~~~~~~~~--~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~ 968 (1002)
..||.+.+.......+......++.. ..++..+.+||.+||+.||.+||| +.++++||||+...+..+++
T Consensus 226 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~h~~~~~~~~~~~~~ 297 (298)
T 1phk_A 226 SPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYT----AEEALAHPFFQQYVVEEVRH 297 (298)
T ss_dssp SCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCC----HHHHTTSGGGCTTC------
T ss_pred CCCCcCccHHHHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCC----HHHHHhChHhhhccchhhcc
Confidence 99999988888888888776655433 457889999999999999999999 99999999999988877654
No 85
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=5.6e-42 Score=387.20 Aligned_cols=260 Identities=27% Similarity=0.477 Sum_probs=233.1
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (1002)
..++|++.+.||+|+||.||+|.+..+++.||+|++.............+.+|+.+++.++||||+++++++.+.+.+|+
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 118 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 118 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 35689999999999999999999999999999999987766666777888999999999999999999999999999999
Q ss_pred EEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCC
Q 001869 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
||||+.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 119 v~e~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~- 195 (335)
T 2owb_A 119 VLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG- 195 (335)
T ss_dssp EECCCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT-
T ss_pred EEecCCCCCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc-
Confidence 99999999999998764 459999999999999999999999999999999999999999999999999986542110
Q ss_pred CCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001869 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||.+....+.
T Consensus 196 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~ 249 (335)
T 2owb_A 196 --------------------------ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 249 (335)
T ss_dssp --------------------------CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred --------------------------ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHH
Confidence 112345799999999999999999999999999999999999999999888888
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
+..+......++. .++..+.+||.+||+.||.+||| +.++++||||+..
T Consensus 250 ~~~~~~~~~~~~~--~~~~~~~~li~~~l~~dp~~Rps----~~ell~~~~~~~~ 298 (335)
T 2owb_A 250 YLRIKKNEYSIPK--HINPVAASLIQKMLQTDPTARPT----INELLNDEFFTSG 298 (335)
T ss_dssp HHHHHHTCCCCCT--TSCHHHHHHHHHHTCSSGGGSCC----GGGGGGSHHHHTS
T ss_pred HHHHhcCCCCCCc--cCCHHHHHHHHHHccCChhHCcC----HHHHhcCccccCC
Confidence 8888777666554 46889999999999999999999 9999999999874
No 86
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=3.9e-42 Score=377.11 Aligned_cols=255 Identities=30% Similarity=0.524 Sum_probs=226.0
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.++|++.+.||+|+||.||+|.+..++..+|+|.+..... .....+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLV 84 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC---SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc---chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEE
Confidence 3579999999999999999999999999999999976532 2356788899999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEE---ccCCcEEEEeccCCcccCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL---QGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl---~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 85 ~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~ 162 (277)
T 3f3z_A 85 MELCTGGELFERVVHK--RVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG 162 (277)
T ss_dssp EECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT
T ss_pred EeccCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc
Confidence 9999999999998764 459999999999999999999999999999999999999 77889999999998654311
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
.......||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+..
T Consensus 163 ----------------------------~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~ 213 (277)
T 3f3z_A 163 ----------------------------KMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDS 213 (277)
T ss_dssp ----------------------------SCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred ----------------------------cchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHH
Confidence 112345799999999998765 889999999999999999999999999998
Q ss_pred HHHHHHHhCCCCCCCC--CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 905 KTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~--~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
+....+......++.. ..++..+.+||.+||+.||.+||| +.++|+||||+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s----~~~~l~h~~~~~ 267 (277)
T 3f3z_A 214 EVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRIT----SLQALEHEWFEK 267 (277)
T ss_dssp HHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCC----HHHHTTSHHHHH
T ss_pred HHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcC----HHHHhcCHHHhc
Confidence 8888888877666543 357889999999999999999999 999999999985
No 87
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.1e-42 Score=391.07 Aligned_cols=261 Identities=25% Similarity=0.402 Sum_probs=213.6
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||+|+||.||+|.+..+++.||+|++..... ......+.+|+.+++.++||||+++++++...+.+|+||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 79 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC--------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc--cccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEe
Confidence 589999999999999999999999999999999875421 111123456999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+. ++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 80 e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~---- 153 (324)
T 3mtl_A 80 EYLD-KDLKQYLDDC-GNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP---- 153 (324)
T ss_dssp ECCS-EEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCC----
Confidence 9995 6999988765 346999999999999999999999999999999999999999999999999998543211
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
.......+||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+.+
T Consensus 154 -----------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~ 210 (324)
T 3mtl_A 154 -----------------------TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQL 210 (324)
T ss_dssp --------------------------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred -----------------------ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 111234578999999999976 56789999999999999999999999998888777
Q ss_pred HHHHhCC--C---CCC-----------------------CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcC
Q 001869 908 ANILHKD--L---KFP-----------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 959 (1002)
Q Consensus 908 ~~i~~~~--~---~~~-----------------------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 959 (1002)
..+.... . .++ ....++.++.+||.+||+.||.+||| ++++|+||||+
T Consensus 211 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l~hp~f~ 286 (324)
T 3mtl_A 211 HFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRIS----AEDAMKHPFFL 286 (324)
T ss_dssp HHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCC----HHHHTTSGGGG
T ss_pred HHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCC----HHHHhcChhhh
Confidence 7665421 0 011 01246788999999999999999999 99999999999
Q ss_pred CCChh
Q 001869 960 GVNWA 964 (1002)
Q Consensus 960 ~~~~~ 964 (1002)
++...
T Consensus 287 ~~~~~ 291 (324)
T 3mtl_A 287 SLGER 291 (324)
T ss_dssp GGCST
T ss_pred hcccc
Confidence 86554
No 88
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=7.2e-42 Score=377.12 Aligned_cols=257 Identities=30% Similarity=0.514 Sum_probs=219.3
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
+.|++.+.||+|+||.||+|.+..++..+|+|++.... .......+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 99 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR--SQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVM 99 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG--CCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccc--cchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEE
Confidence 68999999999999999999999999999999998653 2334567889999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEE---ccCCcEEEEeccCCcccCC
Q 001869 749 DYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL---QGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl---~~~g~vkL~DFG~a~~~~~ 823 (1002)
||+++++|.+++... ....+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~ 179 (285)
T 3is5_A 100 ETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS 179 (285)
T ss_dssp CCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC---
T ss_pred EeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCC
Confidence 999999999988642 23569999999999999999999999999999999999999 4567899999999865321
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
. .......||+.|+|||++. ..++.++|||||||++|+|++|..||.+.+.
T Consensus 180 ~----------------------------~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~ 230 (285)
T 3is5_A 180 D----------------------------EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL 230 (285)
T ss_dssp -----------------------------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred c----------------------------ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCH
Confidence 1 1123457999999999986 4578899999999999999999999999888
Q ss_pred HHHHHHHHhCCCCCCC-CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 904 QKTFANILHKDLKFPS-STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~~-~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
......+......++. ...++..+.+||.+||+.||.+||| +.++|+||||+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps----~~e~l~hp~f~~ 284 (285)
T 3is5_A 231 EEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPS----AAQVLHHEWFKQ 284 (285)
T ss_dssp HHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCC----HHHHHTSGGGGC
T ss_pred HHHHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcC----HHHHhcCHHhhc
Confidence 8777777665544433 2447889999999999999999999 999999999985
No 89
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=4.9e-42 Score=393.37 Aligned_cols=259 Identities=23% Similarity=0.421 Sum_probs=211.6
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-----
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----- 742 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~----- 742 (1002)
.++|++++.||+|+||.||+|.+..+++.||||++.... ........+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTT-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEecccc-CChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 579999999999999999999999999999999997642 34555677889999999999999999999997654
Q ss_pred -eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 743 -HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 743 -~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
.+|+||||+. ++|.+++.. .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 103 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 177 (371)
T 2xrw_A 103 QDVYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 177 (371)
T ss_dssp CEEEEEEECCS-EEHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC----
T ss_pred cceEEEEEcCC-CCHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeeccccc
Confidence 7899999995 578888853 3899999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
... ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.
T Consensus 178 ~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 229 (371)
T 2xrw_A 178 GTS----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 229 (371)
T ss_dssp ----------------------------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccc----------------------------cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 211 1122457999999999999999999999999999999999999999998
Q ss_pred ChHHHHHHHHhCCCC----------------------CCCC-----------C-------CCCHHHHHHHHHccccCcCC
Q 001869 902 TRQKTFANILHKDLK----------------------FPSS-----------T-------PTSLHAKQLMYRLLHRDPKS 941 (1002)
Q Consensus 902 ~~~~~~~~i~~~~~~----------------------~~~~-----------~-------~~s~~~~~Ll~~~L~~dP~~ 941 (1002)
+....+..++..... +... + ..+..+++||.+||..||.+
T Consensus 230 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~ 309 (371)
T 2xrw_A 230 DHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASK 309 (371)
T ss_dssp SHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGG
T ss_pred CHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhh
Confidence 888777776543110 0000 0 01467899999999999999
Q ss_pred CCCChhcHHHHHcCCCcCCCChh
Q 001869 942 RLGSHEGANEIKKHPFFKGVNWA 964 (1002)
Q Consensus 942 Rpt~~~~a~elL~Hp~f~~~~~~ 964 (1002)
||| ++++|+||||+.....
T Consensus 310 R~t----~~e~l~hp~~~~~~~~ 328 (371)
T 2xrw_A 310 RIS----VDEALQHPYINVWYDP 328 (371)
T ss_dssp SCC----HHHHHHSHHHHTTCCH
T ss_pred CCC----HHHHhCCcchhhhcCc
Confidence 999 9999999999974333
No 90
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=8.4e-42 Score=377.99 Aligned_cols=260 Identities=27% Similarity=0.477 Sum_probs=232.4
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (1002)
..++|++.+.||+|+||.||+|.+..+++.||+|++.............+.+|+.+++.++||||+++++++.+.+..|+
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (294)
T 2rku_A 13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 92 (294)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEE
Confidence 35689999999999999999999999999999999987765566677888999999999999999999999999999999
Q ss_pred EEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCC
Q 001869 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
||||+.+++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 93 v~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~- 169 (294)
T 2rku_A 93 VLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG- 169 (294)
T ss_dssp EEECCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT-
T ss_pred EEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccCc-
Confidence 99999999999998764 459999999999999999999999999999999999999999999999999986532110
Q ss_pred CCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001869 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||.+....+.
T Consensus 170 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~ 223 (294)
T 2rku_A 170 --------------------------ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 223 (294)
T ss_dssp --------------------------CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred --------------------------cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 112235799999999999999899999999999999999999999999888888
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
+..+......++. .++..+.+||.+||+.||.+||| ++++++||||+..
T Consensus 224 ~~~~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~Rps----~~~ll~~~~~~~~ 272 (294)
T 2rku_A 224 YLRIKKNEYSIPK--HINPVAASLIQKMLQTDPTARPT----INELLNDEFFTSG 272 (294)
T ss_dssp HHHHHTTCCCCCT--TSCHHHHHHHHHHTCSSGGGSCC----GGGGGGSHHHHTS
T ss_pred HHHHhhccCCCcc--ccCHHHHHHHHHHcccChhhCcC----HHHHhhChheecC
Confidence 8887777665554 46889999999999999999999 9999999999864
No 91
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2.5e-42 Score=388.46 Aligned_cols=253 Identities=29% Similarity=0.482 Sum_probs=199.4
Q ss_pred Ccccc---cccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEE
Q 001869 670 HFRPI---KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 670 ~y~i~---~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~ 745 (1002)
+|++. +.||+|+||.||+|.+..+++.||||++.+. ....+.+|+.+++.+. ||||+++++++.+....|
T Consensus 9 ~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~ 82 (325)
T 3kn6_A 9 HYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR------MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTF 82 (325)
T ss_dssp HEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred ccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEE
Confidence 45554 7899999999999999999999999998753 3456778999999996 999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCC---cEEEEeccCCcccC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLTDFDLSCLTS 822 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g---~vkL~DFG~a~~~~ 822 (1002)
+|||||+|++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||++....
T Consensus 83 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 160 (325)
T 3kn6_A 83 LVMELLNGGELFERIKKK--KHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKP 160 (325)
T ss_dssp EEECCCCSCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECC
T ss_pred EEEEccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecC
Confidence 999999999999999875 4599999999999999999999999999999999999998765 89999999986532
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
... ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+
T Consensus 161 ~~~---------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 213 (325)
T 3kn6_A 161 PDN---------------------------QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHD 213 (325)
T ss_dssp C-------------------------------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC---
T ss_pred CCC---------------------------CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCc
Confidence 111 11234578999999999999999999999999999999999999997643
Q ss_pred h-------HHHHHHHHhCCCCCCCC--CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 903 R-------QKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 903 ~-------~~~~~~i~~~~~~~~~~--~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
. .+.+..+..+...++.. ..++.++++||.+||+.||.+||| +.++++||||+..
T Consensus 214 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt----~~ell~h~w~~~~ 277 (325)
T 3kn6_A 214 RSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLK----MSGLRYNEWLQDG 277 (325)
T ss_dssp ----CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCC----TTTSTTCGGGCTT
T ss_pred cccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCC----HHHHhcChhhccC
Confidence 3 45666666666555432 357889999999999999999999 8999999999973
No 92
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.2e-42 Score=390.56 Aligned_cols=265 Identities=25% Similarity=0.419 Sum_probs=218.6
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccCh-----hHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR-----NKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~-----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (1002)
.++|++++.||+|+||.||+|.+..+++.||||++........ .....+.+|+.+++.++||||+++++++.+.+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 3689999999999999999999999999999999987543221 13345667999999999999999999999999
Q ss_pred eEEEEEecCCCC-cHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 743 HVCLITDYCPGG-ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 743 ~~~lV~E~~~gg-sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
.+++||||+.+| +|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 180 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDRH--PRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL 180 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHTC--CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEEEeCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceEC
Confidence 999999999666 999999764 45999999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCC-CChhhHHHHHHHHHHHHcCCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
... ......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||..
T Consensus 181 ~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 232 (335)
T 3dls_A 181 ERG----------------------------KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE 232 (335)
T ss_dssp CTT----------------------------CCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSS
T ss_pred CCC----------------------------CceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhh
Confidence 311 11234579999999999988876 7799999999999999999999976
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC------CChhhhhccCCCCC
Q 001869 901 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG------VNWALVRCMNPPEL 974 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~------~~~~~~~~~~~~~~ 974 (1002)
... ...... .....++.++.+||.+||+.||.+||| +.++++||||+. ..|..+.....|..
T Consensus 233 ~~~------~~~~~~--~~~~~~~~~l~~li~~~L~~dP~~Rps----~~ell~hp~~~~~~~~~~~~~~~~~~~~~~~~ 300 (335)
T 3dls_A 233 LEE------TVEAAI--HPPYLVSKELMSLVSGLLQPVPERRTT----LEKLVTDPWVTQPVNLADYTWEEVFRVNKPES 300 (335)
T ss_dssp GGG------GTTTCC--CCSSCCCHHHHHHHHHHTCSSGGGSCC----HHHHHHCTTTTCCCCGGGCCHHHHC-------
T ss_pred HHH------HHhhcc--CCCcccCHHHHHHHHHHccCChhhCcC----HHHHhcCccccCCccccccCHHHHhhhcCCCC
Confidence 322 122222 223347889999999999999999999 999999999976 56777766665544
No 93
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=8.1e-42 Score=374.19 Aligned_cols=260 Identities=28% Similarity=0.482 Sum_probs=221.1
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+..++|++++.||+|+||.||+|.+..+++.||||++.............+.+|+.+++.++||||+++++++...+..
T Consensus 7 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 86 (276)
T 2h6d_A 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDF 86 (276)
T ss_dssp CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred cceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeE
Confidence 45678999999999999999999999999999999999765433334456788999999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||+.+++|.+++... ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||++......
T Consensus 87 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 164 (276)
T 2h6d_A 87 FMVMEYVSGGELFDYICKH--GRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164 (276)
T ss_dssp EEEEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred EEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCC
Confidence 9999999999999999765 35899999999999999999999999999999999999999999999999998653211
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCC-CChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
.......||+.|+|||++.+..+ +.++||||||+++|+|++|..||.+...
T Consensus 165 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~ 216 (276)
T 2h6d_A 165 ----------------------------EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV 216 (276)
T ss_dssp ----------------------------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred ----------------------------cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH
Confidence 01123468999999999988765 5799999999999999999999999888
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 904 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
...+..+......++. .++..+.+||.+||+.||.+||| +.++++||||+.
T Consensus 217 ~~~~~~~~~~~~~~~~--~~~~~l~~li~~~l~~~p~~Rps----~~~~l~h~~~~~ 267 (276)
T 2h6d_A 217 PTLFKKIRGGVFYIPE--YLNRSVATLLMHMLQVDPLKRAT----IKDIREHEWFKQ 267 (276)
T ss_dssp HHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSSGGGSCC----HHHHHHSHHHHT
T ss_pred HHHHHHhhcCcccCch--hcCHHHHHHHHHHccCChhhCCC----HHHHHhChhhcc
Confidence 8888777776655543 46889999999999999999999 999999999986
No 94
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=4.8e-42 Score=407.76 Aligned_cols=258 Identities=28% Similarity=0.459 Sum_probs=225.8
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.++|++++.||+|+||.||+|.+..+++.||||++.+.... ......+.+|+.+++.++||||+++++++.+.+.+|+|
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHB-CSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEeccccc-chHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 36899999999999999999999999999999999764322 22356788999999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEc---cCCcEEEEeccCCcccCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ---GNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~---~~g~vkL~DFG~a~~~~~~ 824 (1002)
||||.|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 100 ~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 177 (486)
T 3mwu_A 100 GELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (486)
T ss_dssp ECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC
T ss_pred EEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC
Confidence 9999999999998765 4599999999999999999999999999999999999995 4567999999998653211
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
......+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+..
T Consensus 178 ----------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~ 228 (486)
T 3mwu_A 178 ----------------------------TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY 228 (486)
T ss_dssp --------------------------------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred ----------------------------CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 11224579999999999976 4888999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCC--CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 905 KTFANILHKDLKFP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~--~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
+.+..+......++ .+..++.++++||.+||+.||.+||| +.++|+||||+..
T Consensus 229 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t----~~~~l~hp~~~~~ 283 (486)
T 3mwu_A 229 DILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRIT----ATQCLEHPWIQKY 283 (486)
T ss_dssp HHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCC----HHHHHHCHHHHHT
T ss_pred HHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcC----HHHHhcCHhhccC
Confidence 99998888766543 34567899999999999999999999 9999999999864
No 95
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=9.4e-42 Score=407.09 Aligned_cols=259 Identities=28% Similarity=0.439 Sum_probs=224.4
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccCh----------hHHHHHHHHHHHHHhCCCCCcceEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR----------NKVHRACAEREILDMLDHPFVPALYAS 737 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~----------~~~~~~~~E~~il~~l~hpnIv~l~~~ 737 (1002)
.++|++++.||+|+||.||+|.+..+++.||+|++.+...... .....+.+|+.+++.++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 4789999999999999999999999999999999986543221 335678899999999999999999999
Q ss_pred EEeCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCC---cEEEEe
Q 001869 738 FQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLTD 814 (1002)
Q Consensus 738 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g---~vkL~D 814 (1002)
+.+...+|+|||||+||+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~D 192 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINR--HKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVD 192 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECC
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEE
Confidence 99999999999999999999999765 4599999999999999999999999999999999999999776 699999
Q ss_pred ccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcC
Q 001869 815 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYG 894 (1002)
Q Consensus 815 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG 894 (1002)
||++...... ......+||+.|+|||++.+ .++.++|||||||++|+|++|
T Consensus 193 fg~a~~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g 243 (504)
T 3q5i_A 193 FGLSSFFSKD----------------------------YKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCG 243 (504)
T ss_dssp CTTCEECCTT----------------------------SCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHS
T ss_pred CCCCEEcCCC----------------------------CccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhC
Confidence 9999654311 11234579999999999874 588999999999999999999
Q ss_pred CCCCCCCChHHHHHHHHhCCCCCCC--CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 895 YTPFRGKTRQKTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 895 ~~Pf~~~~~~~~~~~i~~~~~~~~~--~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
..||.+.+..+.+..+..+...++. +..++.++++||.+||+.||.+||| +.++|+||||+..
T Consensus 244 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t----~~e~l~h~~~~~~ 308 (504)
T 3q5i_A 244 YPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCT----AEEALNSRWIKKY 308 (504)
T ss_dssp SCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCC----HHHHHTSHHHHHT
T ss_pred CCCCCCCCHHHHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCC----HHHHhcCHhhhhc
Confidence 9999999999999999888765542 3567899999999999999999999 9999999999864
No 96
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=6.8e-42 Score=391.30 Aligned_cols=259 Identities=27% Similarity=0.411 Sum_probs=205.5
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 741 (1002)
.++|++++.||+|+||.||+|.+..+|+.||||++... .........+.+|+.+++.++||||+++++++...
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~-~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSST-TSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCcc-ccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 37899999999999999999999999999999998764 23455667888999999999999999999998654
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
..+|+||||+ +++|.+++.. ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~ 182 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT 182 (367)
T ss_dssp CCCEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC-------
T ss_pred CeEEEEeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence 5689999999 8999998865 45999999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
.. .....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+
T Consensus 183 ~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 232 (367)
T 2fst_X 183 AD------------------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232 (367)
T ss_dssp --------------------------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cc------------------------------cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 21 1123579999999999987 6788999999999999999999999999
Q ss_pred CChHHHHHHHHhCC-----------------------CCCCC------CCCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001869 901 KTRQKTFANILHKD-----------------------LKFPS------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~-----------------------~~~~~------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
.+....+..+.... ...+. ....++.+.+||.+||+.||.+||| +.+
T Consensus 233 ~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t----~~e 308 (367)
T 2fst_X 233 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT----AAQ 308 (367)
T ss_dssp SSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCC----HHH
T ss_pred CCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcC----HHH
Confidence 88877776665410 00111 1245788999999999999999999 999
Q ss_pred HHcCCCcCCCChhh
Q 001869 952 IKKHPFFKGVNWAL 965 (1002)
Q Consensus 952 lL~Hp~f~~~~~~~ 965 (1002)
+|+||||+......
T Consensus 309 ~L~hp~~~~~~~~~ 322 (367)
T 2fst_X 309 ALAHAYFAQYHDPD 322 (367)
T ss_dssp HHTSGGGTTTCCGG
T ss_pred HhcChhhhhccCCC
Confidence 99999999865443
No 97
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.2e-41 Score=378.65 Aligned_cols=256 Identities=32% Similarity=0.527 Sum_probs=223.9
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.++|++++.||+|+||.||+|.+..+++.||+|++.... ......+.+|+.+++.++||||+++++++.+.+.+|+|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP---AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLV 84 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc---ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEE
Confidence 358999999999999999999999999999999998542 22335678899999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEE---ccCCcEEEEeccCCcccCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL---QGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl---~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||++.....
T Consensus 85 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~- 161 (304)
T 2jam_A 85 MQLVSGGELFDRILER--GVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN- 161 (304)
T ss_dssp ECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC-
T ss_pred EEcCCCccHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC-
Confidence 9999999999998764 458999999999999999999999999999999999999 6788999999999854211
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..
T Consensus 162 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 213 (304)
T 2jam_A 162 ----------------------------GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES 213 (304)
T ss_dssp ----------------------------BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH
T ss_pred ----------------------------CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH
Confidence 0112346999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHhCCCCCCC--CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 905 KTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~--~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
..+..+......++. ...++..+.+||.+||..||.+||| +.++++||||++.
T Consensus 214 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~~l~h~~~~~~ 268 (304)
T 2jam_A 214 KLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYT----CEKALSHPWIDGN 268 (304)
T ss_dssp HHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCC----HHHHHTSHHHHSS
T ss_pred HHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcC----HHHHhcCccccCC
Confidence 888888877655443 3567899999999999999999999 9999999999873
No 98
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=4.9e-42 Score=391.51 Aligned_cols=265 Identities=25% Similarity=0.406 Sum_probs=225.0
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+..++|++++.||+|+||.||+|.+..+++.||+|++.... .......+.+|+.+++.++||||+++++++...+.+
T Consensus 29 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 106 (360)
T 3eqc_A 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEI 106 (360)
T ss_dssp CCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC--CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEE
T ss_pred ccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc--CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEE
Confidence 456789999999999999999999999999999999998652 455567889999999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CcccCCCCCCCEEEccCCcEEEEeccCCcccCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~-gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
|+||||++|++|.+++... ..+++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++.....
T Consensus 107 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 184 (360)
T 3eqc_A 107 SICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 184 (360)
T ss_dssp EEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred EEEEECCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence 9999999999999999875 3599999999999999999999996 999999999999999999999999999853210
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||...+.
T Consensus 185 -----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 235 (360)
T 3eqc_A 185 -----------------------------SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDA 235 (360)
T ss_dssp -----------------------------HC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCH
T ss_pred -----------------------------ccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 012245799999999999999999999999999999999999999987665
Q ss_pred HHHH------------------------------------------HHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCC
Q 001869 904 QKTF------------------------------------------ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKS 941 (1002)
Q Consensus 904 ~~~~------------------------------------------~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~ 941 (1002)
.... ..+............++.++.+||.+||+.||.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 315 (360)
T 3eqc_A 236 KELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAE 315 (360)
T ss_dssp HHHHHHHC------------------------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTT
T ss_pred HHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhh
Confidence 4332 2222222222223346889999999999999999
Q ss_pred CCCChhcHHHHHcCCCcCCCChhhh
Q 001869 942 RLGSHEGANEIKKHPFFKGVNWALV 966 (1002)
Q Consensus 942 Rpt~~~~a~elL~Hp~f~~~~~~~~ 966 (1002)
||| ++++|+||||+..++..+
T Consensus 316 Rpt----~~ell~hp~~~~~~~~~~ 336 (360)
T 3eqc_A 316 RAD----LKQLMVHAFIKRSDAEEV 336 (360)
T ss_dssp SCC----HHHHHTSHHHHHHHHSCC
T ss_pred CCC----HHHHhhChHhhcchHhhh
Confidence 999 999999999998766644
No 99
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.4e-41 Score=376.89 Aligned_cols=263 Identities=27% Similarity=0.447 Sum_probs=219.8
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
+++|++++.||+|+||.||+|.+..+++.||||++..... .......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 80 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC---------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCcc-chhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEE
Confidence 4689999999999999999999999999999999875421 222335678899999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+. ++|.+++.......++...++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 81 ~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~--- 156 (299)
T 2r3i_A 81 FEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--- 156 (299)
T ss_dssp EECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC---
T ss_pred EEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCC---
Confidence 99996 69999998765567999999999999999999999999999999999999999999999999998553211
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCC-CCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
........||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+.+..+.
T Consensus 157 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~ 212 (299)
T 2r3i_A 157 ------------------------VRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212 (299)
T ss_dssp ------------------------SBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred ------------------------ccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHH
Confidence 01122346899999999998765 78899999999999999999999999888777
Q ss_pred HHHHHhCCC------------------CCCC---------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcC
Q 001869 907 FANILHKDL------------------KFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 959 (1002)
Q Consensus 907 ~~~i~~~~~------------------~~~~---------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 959 (1002)
+..+..... .++. ...++.++.+||.+||+.||.+||| +.++++||||+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~~~l~hp~~~ 288 (299)
T 2r3i_A 213 LFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AKAALAHPFFQ 288 (299)
T ss_dssp HHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCC----HHHHHTSGGGT
T ss_pred HHHHHHHhCCCchhhhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCC----HHHHhcChhhh
Confidence 776654210 0111 1236788999999999999999999 99999999999
Q ss_pred CCCh
Q 001869 960 GVNW 963 (1002)
Q Consensus 960 ~~~~ 963 (1002)
.+.+
T Consensus 289 ~~~~ 292 (299)
T 2r3i_A 289 DVTK 292 (299)
T ss_dssp TCCC
T ss_pred cCCC
Confidence 8643
No 100
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.9e-42 Score=387.78 Aligned_cols=267 Identities=27% Similarity=0.380 Sum_probs=217.0
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccC--hhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN--RNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
.++|++++.||+|+||.||+|.+..+|+.||||++....... ......+.+|+.+++.++||||+++++++...+..|
T Consensus 9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 88 (346)
T 1ua2_A 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS 88 (346)
T ss_dssp ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCE
T ss_pred hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceE
Confidence 468999999999999999999999999999999987543211 111246778999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+||||+.+ +|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 89 lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~- 165 (346)
T 1ua2_A 89 LVFDFMET-DLEVIIKDN-SLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP- 165 (346)
T ss_dssp EEEECCSE-EHHHHHTTC-CSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC-
T ss_pred EEEEcCCC-CHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCC-
Confidence 99999965 898888754 346899999999999999999999999999999999999999999999999998654211
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
.......+||+.|+|||++.+. .++.++|||||||++|+|++|.+||.+.+..
T Consensus 166 --------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~ 219 (346)
T 1ua2_A 166 --------------------------NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL 219 (346)
T ss_dssp --------------------------CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred --------------------------cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH
Confidence 1112345789999999999764 4788999999999999999999999999888
Q ss_pred HHHHHHHhCC--C---CCCC---------------------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 905 KTFANILHKD--L---KFPS---------------------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 905 ~~~~~i~~~~--~---~~~~---------------------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
+.+..+.... . .++. ...++..+++||.+||+.||.+||| +.++|+||||
T Consensus 220 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell~h~~f 295 (346)
T 1ua2_A 220 DQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARIT----ATQALKMKYF 295 (346)
T ss_dssp HHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCC----HHHHHTSGGG
T ss_pred HHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCC----HHHHhcChhh
Confidence 8887776421 0 1111 0345688999999999999999999 9999999999
Q ss_pred CCCChhhhh
Q 001869 959 KGVNWALVR 967 (1002)
Q Consensus 959 ~~~~~~~~~ 967 (1002)
+...+....
T Consensus 296 ~~~~~~~~~ 304 (346)
T 1ua2_A 296 SNRPGPTPG 304 (346)
T ss_dssp TSSSCCCCS
T ss_pred hcCCCCCCc
Confidence 987665443
No 101
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.5e-41 Score=377.84 Aligned_cols=267 Identities=25% Similarity=0.381 Sum_probs=224.5
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeeccccc-ChhHHHHHHHHHHHHHhCCCCCcceEEEEEE--eCCeE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-NRNKVHRACAEREILDMLDHPFVPALYASFQ--TKTHV 744 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~--~~~~~ 744 (1002)
.++|++++.||+|+||.||+|.+..+++.||+|++...... .......+.+|+.+++.++||||+++++++. +.+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 46899999999999999999999999999999999764321 1344577889999999999999999999984 45689
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||+.++ |.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 162 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTT
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCcc
Confidence 9999999665 888887665677999999999999999999999999999999999999999999999999998654311
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCC--CChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH--TSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~--~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
.. ........||+.|+|||++.+... +.++|||||||++|+|++|..||.+.+
T Consensus 163 ~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 217 (305)
T 2wtk_C 163 AA-------------------------DDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN 217 (305)
T ss_dssp CS-------------------------SCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cc-------------------------ccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch
Confidence 00 011234569999999999976543 679999999999999999999999998
Q ss_pred hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhh
Q 001869 903 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 966 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~ 966 (1002)
....+..+......++. .++..+.+||.+||+.||.+||| +.++++||||+.......
T Consensus 218 ~~~~~~~i~~~~~~~~~--~~~~~l~~li~~~l~~dp~~Rps----~~~ll~~~~~~~~~~~~~ 275 (305)
T 2wtk_C 218 IYKLFENIGKGSYAIPG--DCGPPLSDLLKGMLEYEPAKRFS----IRQIRQHSWFRKKHPPAE 275 (305)
T ss_dssp HHHHHHHHHHCCCCCCS--SSCHHHHHHHHHHTCSSTTTSCC----HHHHHHSHHHHSCCCC-C
T ss_pred HHHHHHHHhcCCCCCCC--ccCHHHHHHHHHHccCChhhCCC----HHHHhcCcccccCCCCcC
Confidence 88888888877665553 47889999999999999999999 999999999998655443
No 102
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.2e-41 Score=405.10 Aligned_cols=257 Identities=30% Similarity=0.506 Sum_probs=221.7
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
+.|++++.||+|+||.||+|.+..++..||+|++.+.... ......+.+|+.+++.++||||+++++++.+...+|+||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVS-TSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccC-chHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5799999999999999999999999999999999865332 223467889999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccC---CcEEEEeccCCcccCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~---g~vkL~DFG~a~~~~~~~ 825 (1002)
|||.||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.. +.+||+|||++......
T Consensus 116 e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~- 192 (494)
T 3lij_A 116 ECYKGGELFDEIIHR--MKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ- 192 (494)
T ss_dssp ECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT-
T ss_pred ecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC-
Confidence 999999999998765 459999999999999999999999999999999999999764 55999999998654311
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
......+||+.|+|||++. ..++.++|||||||++|+|++|.+||.+.+..+
T Consensus 193 ---------------------------~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~ 244 (494)
T 3lij_A 193 ---------------------------KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE 244 (494)
T ss_dssp ---------------------------BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred ---------------------------ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 1123457999999999986 468899999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCC--CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 906 TFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 906 ~~~~i~~~~~~~~~--~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
.+..+......++. +..++..+++||.+||+.||.+||| +.++|+||||+..
T Consensus 245 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s----~~e~l~hp~~~~~ 298 (494)
T 3lij_A 245 ILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRIS----AQQALEHPWIKEM 298 (494)
T ss_dssp HHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCC----HHHHHTCHHHHHH
T ss_pred HHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCcc----HHHHhcCcccccC
Confidence 99999888766543 3568999999999999999999999 9999999999864
No 103
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=5.8e-42 Score=376.77 Aligned_cols=264 Identities=31% Similarity=0.491 Sum_probs=227.3
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccCh---hHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR---NKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.++|++++.||+|+||.||+|.+..+++.||+|++........ .....+.+|+.+++.++||||+++++++...+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 3579999999999999999999999999999999986543221 1356788999999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCC----cEEEEeccCCcc
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG----HVSLTDFDLSCL 820 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g----~vkL~DFG~a~~ 820 (1002)
|+||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++.++ .+||+|||++..
T Consensus 84 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~ 161 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 161 (283)
T ss_dssp EEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred EEEEeecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEeccccee
Confidence 9999999999999999764 4599999999999999999999999999999999999998877 899999999865
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001869 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
.... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+
T Consensus 162 ~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 213 (283)
T 3bhy_A 162 IEAG----------------------------NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 213 (283)
T ss_dssp CC------------------------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred ccCC----------------------------CcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCC
Confidence 3211 011234699999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHhCCCCCCC--CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhh
Q 001869 901 KTRQKTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWAL 965 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~~--~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~ 965 (1002)
.+....+..+......++. ...++..+.+||.+||+.||.+||| +.++++||||+.+.+..
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~~l~h~~~~~~~~~~ 276 (283)
T 3bhy_A 214 ETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMT----IAQSLEHSWIKAIRRRN 276 (283)
T ss_dssp SSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCC----HHHHHHCHHHHHHHHCC
T ss_pred cchHHHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcC----HHHHHhCHHHHHHHHHh
Confidence 9888888877766554432 2456888999999999999999999 99999999999865543
No 104
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-41 Score=380.14 Aligned_cols=254 Identities=25% Similarity=0.348 Sum_probs=208.1
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHh-CCCCCcceEEEEEEeCCeEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDM-LDHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~-l~hpnIv~l~~~~~~~~~~~l 746 (1002)
.++|++++.||+|+||+||+|.+..+++.||||++..... ..........|+..+.. .+||||+++++++.+.+.+|+
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFR-GPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCC-SHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEeccccc-ChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 4689999999999999999999999999999999876432 33333444555555544 499999999999999999999
Q ss_pred EEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCC
Q 001869 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
||||+ +++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 135 v~e~~-~~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~-- 210 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAW-GASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA-- 210 (311)
T ss_dssp EEECC-CCBHHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred EEecc-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccC--
Confidence 99999 78999988765 346999999999999999999999999999999999999999999999999998653211
Q ss_pred CCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001869 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
.......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+...
T Consensus 211 --------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~--- 260 (311)
T 3p1a_A 211 --------------------------GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG--- 260 (311)
T ss_dssp ------------------------------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH---
T ss_pred --------------------------CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH---
Confidence 11223569999999999876 689999999999999999999877765432
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
...+.....+......++..+.+||.+||+.||.+||| +.++++||||+.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt----~~ell~hp~~~~ 310 (311)
T 3p1a_A 261 WQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRAT----AEALLALPVLRQ 310 (311)
T ss_dssp HHHHTTTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCC----HHHHHTSGGGSC
T ss_pred HHHHhccCCCcccccCCCHHHHHHHHHHcCCChhhCcC----HHHHHhCccccC
Confidence 33333333222223457889999999999999999999 999999999985
No 105
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.6e-41 Score=373.40 Aligned_cols=259 Identities=21% Similarity=0.319 Sum_probs=218.5
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
+..++|++++.||+|+||.||+|.+..+++.||+|++.............+.+|+.+++.++||||+++++++...+.+|
T Consensus 8 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 87 (294)
T 4eqm_A 8 IINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYY 87 (294)
T ss_dssp CEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEE
T ss_pred HhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEE
Confidence 34579999999999999999999999999999999997765556667788999999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+||||++|++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 88 lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 88 LVMEYIEGPTLSEYIESH--GPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp EEEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred EEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 999999999999999875 459999999999999999999999999999999999999999999999999986542110
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+...
T Consensus 166 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~ 219 (294)
T 4eqm_A 166 --------------------------LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS 219 (294)
T ss_dssp -----------------------------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHH
T ss_pred --------------------------ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 111234579999999999999999999999999999999999999999988877
Q ss_pred HHHHHHhCCCCCC---CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHH
Q 001869 906 TFANILHKDLKFP---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 952 (1002)
Q Consensus 906 ~~~~i~~~~~~~~---~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~el 952 (1002)
..........+.. ....++..+.++|.+||+.||.+||+..+.+.+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~ 269 (294)
T 4eqm_A 220 IAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDD 269 (294)
T ss_dssp HHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHH
T ss_pred HHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHH
Confidence 7666666543321 2345788999999999999999999744333333
No 106
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=3.2e-41 Score=372.52 Aligned_cols=258 Identities=22% Similarity=0.350 Sum_probs=217.4
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe----C
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT----K 741 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~----~ 741 (1002)
.....|++.+.||+|+||.||+|.+..++..||+|++..... .......+.+|+.+++.++||||+++++++.. .
T Consensus 23 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (290)
T 1t4h_A 23 NDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGK 101 (290)
T ss_dssp TTSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSC
T ss_pred cCceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhh-CHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCC
Confidence 345579999999999999999999999999999999986533 45566788999999999999999999999875 4
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--cccCCCCCCCEEEc-cCCcEEEEeccCC
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQ-GNGHVSLTDFDLS 818 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~g--IiHrDLKP~NILl~-~~g~vkL~DFG~a 818 (1002)
..+|+||||+++++|.+++... ..++...++.++.||+.||.|||++| |+||||||+|||++ .++.+||+|||++
T Consensus 102 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~ 179 (290)
T 1t4h_A 102 KCIVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA 179 (290)
T ss_dssp EEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGG
T ss_pred ceEEEEEEecCCCCHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCc
Confidence 6789999999999999999874 45899999999999999999999999 99999999999998 7899999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCC
Q 001869 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
..... .......||+.|+|||++.+ .++.++|||||||++|+|++|..||
T Consensus 180 ~~~~~-----------------------------~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf 229 (290)
T 1t4h_A 180 TLKRA-----------------------------SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPY 229 (290)
T ss_dssp GGCCT-----------------------------TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred ccccc-----------------------------cccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCC
Confidence 54221 11224579999999998875 4889999999999999999999999
Q ss_pred CCCChHHHHHHHH-hCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 899 RGKTRQKTFANIL-HKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 899 ~~~~~~~~~~~i~-~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
.+........... ............++.+.+||.+||+.||.+||| +.++++||||++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~h~~f~~ 288 (290)
T 1t4h_A 230 SECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYS----IKDLLNHAFFQE 288 (290)
T ss_dssp TTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCC----HHHHHTSGGGC-
T ss_pred CCcCcHHHHHHHHhccCCccccCCCCCHHHHHHHHHHccCChhhCCC----HHHHhhCccccc
Confidence 8855544444443 333332233446788999999999999999999 999999999986
No 107
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.2e-41 Score=387.03 Aligned_cols=258 Identities=32% Similarity=0.532 Sum_probs=224.2
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeeccccc-C----hhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCC
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-N----RNKVHRACAEREILDML-DHPFVPALYASFQTKT 742 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~-~----~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~ 742 (1002)
++|++.+.||+|+||.||+|.+..+|+.||||++...... . ......+.+|+.+++.+ +||||+++++++...+
T Consensus 94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 173 (365)
T 2y7j_A 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS 173 (365)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence 5799999999999999999999989999999999765311 1 12245678899999999 8999999999999999
Q ss_pred eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccC
Q 001869 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
..|+||||++|++|.+++... ..+++..++.++.||+.||.|||++||+|+||||+|||++.+|.+||+|||++....
T Consensus 174 ~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~ 251 (365)
T 2y7j_A 174 FMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLE 251 (365)
T ss_dssp EEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccccC
Confidence 999999999999999999764 459999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC------CCCCChhhHHHHHHHHHHHHcCCC
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG------AGHTSAVDWWALGILLYEMLYGYT 896 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~------~~~~~~sDIwSlGvil~elltG~~ 896 (1002)
.. ......+||+.|+|||++.+ ..++.++|||||||++|+|++|..
T Consensus 252 ~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~ 303 (365)
T 2y7j_A 252 PG----------------------------EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSP 303 (365)
T ss_dssp TT----------------------------CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSC
T ss_pred CC----------------------------cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCC
Confidence 11 11234679999999999863 357889999999999999999999
Q ss_pred CCCCCChHHHHHHHHhCCCCCCC--CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 897 PFRGKTRQKTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 897 Pf~~~~~~~~~~~i~~~~~~~~~--~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
||.+.+....+..+......++. ...++..+.+||.+||+.||.+||| +.++|+||||+.
T Consensus 304 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps----~~ell~hp~f~r 365 (365)
T 2y7j_A 304 PFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLT----AEQALQHPFFER 365 (365)
T ss_dssp SSCCSSHHHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCC----HHHHHHSGGGCC
T ss_pred CCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcC----HHHHhcCcccCC
Confidence 99998888888888877665442 2457889999999999999999999 999999999973
No 108
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.8e-41 Score=380.95 Aligned_cols=264 Identities=26% Similarity=0.388 Sum_probs=222.3
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEe-----
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT----- 740 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~----- 740 (1002)
..++|++++.||+|+||.||+|.+..+++.||||++.... .....+.+|+.+++.+ +||||+++++++..
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 97 (326)
T 2x7f_A 22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 97 (326)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--C
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc----ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcc
Confidence 4578999999999999999999999999999999987542 2335678899999998 89999999999986
Q ss_pred -CCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCc
Q 001869 741 -KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (1002)
Q Consensus 741 -~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~ 819 (1002)
.+.+|+||||+++++|.+++.......+++..++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||++.
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~ 177 (326)
T 2x7f_A 98 MDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSA 177 (326)
T ss_dssp CCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC
T ss_pred ccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCce
Confidence 5689999999999999999987655679999999999999999999999999999999999999999999999999985
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCccccccccc-----CCCCCChhhHHHHHHHHHHHHcC
Q 001869 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYG 894 (1002)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~~~~sDIwSlGvil~elltG 894 (1002)
..... ........||+.|+|||++. +..++.++|||||||++|+|++|
T Consensus 178 ~~~~~---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g 230 (326)
T 2x7f_A 178 QLDRT---------------------------VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230 (326)
T ss_dssp ----------------------------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHS
T ss_pred ecCcC---------------------------ccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhC
Confidence 53211 01123457999999999997 56688899999999999999999
Q ss_pred CCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhh
Q 001869 895 YTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWAL 965 (1002)
Q Consensus 895 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~ 965 (1002)
..||.+......+..+.....+......++..+.+||.+||..||.+||+ +.++++||||+...+..
T Consensus 231 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~hp~~~~~~~~~ 297 (326)
T 2x7f_A 231 APPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPA----TEQLMKHPFIRDQPNER 297 (326)
T ss_dssp SCTTTTSCHHHHHHHHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCC----HHHHHTSHHHHCCTTHH
T ss_pred CCCCCCCcHHHHHHHhhcCccccCCccccCHHHHHHHHHHhccChhhCCC----HHHHhhChHHhhCcccc
Confidence 99999988877777776665544445567899999999999999999999 99999999999866543
No 109
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2.2e-41 Score=395.25 Aligned_cols=255 Identities=25% Similarity=0.421 Sum_probs=217.8
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC------CCCCcceEEEEEEe
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML------DHPFVPALYASFQT 740 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l------~hpnIv~l~~~~~~ 740 (1002)
...+|++++.||+|+||.||+|.+..+++.||||++... ......+.+|+.+++.+ +|+||+.+++++..
T Consensus 95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~ 170 (429)
T 3kvw_A 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE----KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF 170 (429)
T ss_dssp ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE
T ss_pred ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc----cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc
Confidence 346899999999999999999999999999999998753 34456677888888877 57799999999999
Q ss_pred CCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCc--EEEEeccCC
Q 001869 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH--VSLTDFDLS 818 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~--vkL~DFG~a 818 (1002)
.+.+|+||||+ +++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++. +||+|||++
T Consensus 171 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a 249 (429)
T 3kvw_A 171 RNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS 249 (429)
T ss_dssp TTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred CCeEEEEEecc-CCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccc
Confidence 99999999999 579999998876667999999999999999999999999999999999999999887 999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCC
Q 001869 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
+.... .....+||+.|+|||++.+..++.++|||||||++|+|++|.+||
T Consensus 250 ~~~~~------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf 299 (429)
T 3kvw_A 250 CYEHQ------------------------------RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLL 299 (429)
T ss_dssp EETTC------------------------------CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred eecCC------------------------------cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCC
Confidence 54321 122457999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHhCCC-C-------------------CCC-------------------------------------CC
Q 001869 899 RGKTRQKTFANILHKDL-K-------------------FPS-------------------------------------ST 921 (1002)
Q Consensus 899 ~~~~~~~~~~~i~~~~~-~-------------------~~~-------------------------------------~~ 921 (1002)
.+.+..+.+..++.... + ++. ..
T Consensus 300 ~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 379 (429)
T 3kvw_A 300 PGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKG 379 (429)
T ss_dssp CCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTT
T ss_pred CCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccc
Confidence 99888777766653100 0 000 01
Q ss_pred CCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 922 PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 922 ~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
..++.+.+||.+||++||.+||| +.++|+||||+.
T Consensus 380 ~~~~~~~dli~~~L~~dP~~Rpt----a~e~L~Hpw~~~ 414 (429)
T 3kvw_A 380 CDDPLFLDFLKQCLEWDPAVRMT----PGQALRHPWLRR 414 (429)
T ss_dssp CCCHHHHHHHHHHTCSSTTTSCC----HHHHHTSTTTC-
T ss_pred cchHHHHHHHHHHCCCChhhCCC----HHHHhCChhhcc
Confidence 23678999999999999999999 999999999997
No 110
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=5.2e-42 Score=389.01 Aligned_cols=268 Identities=25% Similarity=0.440 Sum_probs=231.3
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChh--------------HHHHHHHHHHHHHhCCCCCc
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN--------------KVHRACAEREILDMLDHPFV 731 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~--------------~~~~~~~E~~il~~l~hpnI 731 (1002)
+..++|++++.||+|+||.||+|.+ +++.||||++......... ....+.+|+.+++.++||||
T Consensus 28 ~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 105 (348)
T 2pml_X 28 KYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYC 105 (348)
T ss_dssp EEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTB
T ss_pred cccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCc
Confidence 4568999999999999999999999 8999999999865332221 12678899999999999999
Q ss_pred ceEEEEEEeCCeEEEEEecCCCCcHHHH------HhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCCEEE
Q 001869 732 PALYASFQTKTHVCLITDYCPGGELFLL------LDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLL 804 (1002)
Q Consensus 732 v~l~~~~~~~~~~~lV~E~~~ggsL~~~------l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHrDLKP~NILl 804 (1002)
+++++++.+.+.+|+||||+++++|.++ +.......+++..++.++.||+.||.|||+ +||+||||||+||++
T Consensus 106 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 106 LTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM 185 (348)
T ss_dssp CCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEE
T ss_pred ceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEE
Confidence 9999999999999999999999999998 655445679999999999999999999999 999999999999999
Q ss_pred ccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCC-hhhHH
Q 001869 805 QGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTS-AVDWW 882 (1002)
Q Consensus 805 ~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~-~sDIw 882 (1002)
+.++.+||+|||++...... ......||+.|+|||++.+. .++. ++|||
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~-----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~ 236 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK-----------------------------KIKGSRGTYEFMPPEFFSNESSYNGAKVDIW 236 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT-----------------------------EECSSCSCGGGCCGGGGSSCCCEEHHHHHHH
T ss_pred cCCCcEEEeccccccccccc-----------------------------cccCCCCCcCccCchhhcCCCCCCcchhhHH
Confidence 99999999999998653211 12345799999999999887 5665 99999
Q ss_pred HHHHHHHHHHcCCCCCCCCCh-HHHHHHHHhCCCCCCCC-----------------CCCCHHHHHHHHHccccCcCCCCC
Q 001869 883 ALGILLYEMLYGYTPFRGKTR-QKTFANILHKDLKFPSS-----------------TPTSLHAKQLMYRLLHRDPKSRLG 944 (1002)
Q Consensus 883 SlGvil~elltG~~Pf~~~~~-~~~~~~i~~~~~~~~~~-----------------~~~s~~~~~Ll~~~L~~dP~~Rpt 944 (1002)
||||++|+|++|..||.+... .+....+......++.. ..++..+.+||.+||+.||.+|||
T Consensus 237 slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps 316 (348)
T 2pml_X 237 SLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERIT 316 (348)
T ss_dssp HHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCC
T ss_pred HHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCC
Confidence 999999999999999988776 67777777766666532 457889999999999999999999
Q ss_pred ChhcHHHHHcCCCcCCCChhhhhc
Q 001869 945 SHEGANEIKKHPFFKGVNWALVRC 968 (1002)
Q Consensus 945 ~~~~a~elL~Hp~f~~~~~~~~~~ 968 (1002)
+.++++||||+..+|..+..
T Consensus 317 ----~~e~l~hp~f~~~~~~~~~~ 336 (348)
T 2pml_X 317 ----SEDALKHEWLADTNIEDLRE 336 (348)
T ss_dssp ----HHHHHTSGGGTTCCHHHHHH
T ss_pred ----HHHHhcCccccCCCHHHHHH
Confidence 99999999999999887643
No 111
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=2.4e-42 Score=385.91 Aligned_cols=264 Identities=22% Similarity=0.341 Sum_probs=221.9
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC----
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT---- 742 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~---- 742 (1002)
..++|++++.||+|+||.||+|.+..+++.||||++.............+.+|+.+++.++||||+++++++....
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 89 (311)
T 3ork_A 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP 89 (311)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence 3578999999999999999999999999999999998766556666778899999999999999999999987654
Q ss_pred eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccC
Q 001869 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
.+|+||||++|++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++....
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 167 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA 167 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC----
T ss_pred ccEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCccccc
Confidence 459999999999999999864 459999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
.... ........+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+
T Consensus 168 ~~~~------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~ 223 (311)
T 3ork_A 168 DSGN------------------------SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223 (311)
T ss_dssp --------------------------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccc------------------------ccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 2110 0112234579999999999999999999999999999999999999999998
Q ss_pred hHHHHHHHHhCCCCCCC--CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 903 RQKTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~~~~--~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
.......+.......+. ...++.++.+||.+||+.||.+||+ ..+++.|+|++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~----~~~~l~~~l~~~ 279 (311)
T 3ork_A 224 PVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQ----TAAEMRADLVRV 279 (311)
T ss_dssp HHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCS----SHHHHHHHHHHH
T ss_pred hHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChh----hHHHHHHHHHHH
Confidence 88877777766543332 2457889999999999999999999 788999999874
No 112
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.9e-41 Score=371.01 Aligned_cols=260 Identities=26% Similarity=0.424 Sum_probs=221.5
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
++|++++.||+|+||.||+|.+..+++.||+|++..... ......+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC--TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc--hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 579999999999999999999999999999999875432 334567889999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCC
Q 001869 749 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 828 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~ 828 (1002)
||+++++|.+++... ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||++........
T Consensus 85 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~-- 160 (276)
T 2yex_A 85 EYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-- 160 (276)
T ss_dssp ECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE--
T ss_pred EecCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc--
Confidence 999999999998653 4599999999999999999999999999999999999999999999999999865321100
Q ss_pred CCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCC-CChhhHHHHHHHHHHHHcCCCCCCCCChH-HH
Q 001869 829 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQ-KT 906 (1002)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-~~~sDIwSlGvil~elltG~~Pf~~~~~~-~~ 906 (1002)
........||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.... ..
T Consensus 161 -----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~ 217 (276)
T 2yex_A 161 -----------------------ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217 (276)
T ss_dssp -----------------------ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHH
T ss_pred -----------------------hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHH
Confidence 011234579999999999987765 67899999999999999999999876543 33
Q ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 907 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 907 ~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
+..+.......+....++..+.+||.+||+.||.+||| +.++++||||+..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il~~~~~~~~ 268 (276)
T 2yex_A 218 YSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT----IPDIKKDRWYNKP 268 (276)
T ss_dssp HHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCC----HHHHTTCTTTTCC
T ss_pred HHHhhhcccccCchhhcCHHHHHHHHHHCCCCchhCCC----HHHHhcCccccCh
Confidence 44444444444444567899999999999999999999 9999999999974
No 113
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=7e-41 Score=376.83 Aligned_cols=255 Identities=24% Similarity=0.384 Sum_probs=212.0
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCcceEEEEEEe--CCe
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQT--KTH 743 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~--~~~ 743 (1002)
..++|++++.||+|+||.||+|.+..+++.||||++... ....+.+|+.+++.+. ||||+++++++.. ...
T Consensus 34 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~ 107 (330)
T 3nsz_A 34 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRT 107 (330)
T ss_dssp EGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCC
T ss_pred CCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc------chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCc
Confidence 457899999999999999999999999999999998743 2357888999999996 9999999999987 678
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCC-cEEEEeccCCcccC
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTS 822 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g-~vkL~DFG~a~~~~ 822 (1002)
.++||||+.+++|.+++.. +++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||++....
T Consensus 108 ~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~ 182 (330)
T 3nsz_A 108 PALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 182 (330)
T ss_dssp EEEEEECCCCCCHHHHGGG-----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred eEEEEeccCchhHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcC
Confidence 9999999999999999854 89999999999999999999999999999999999999776 89999999996533
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
.. .......||+.|+|||++.+ ..++.++|||||||++|+|++|..||...
T Consensus 183 ~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~ 234 (330)
T 3nsz_A 183 PG----------------------------QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHG 234 (330)
T ss_dssp TT----------------------------CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred CC----------------------------CccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 11 11234578999999999977 67889999999999999999999999543
Q ss_pred -ChHHHHHHHH-------------hCCCCC----------------------CCCCCCCHHHHHHHHHccccCcCCCCCC
Q 001869 902 -TRQKTFANIL-------------HKDLKF----------------------PSSTPTSLHAKQLMYRLLHRDPKSRLGS 945 (1002)
Q Consensus 902 -~~~~~~~~i~-------------~~~~~~----------------------~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~ 945 (1002)
+....+..+. .....+ .....++.++.+||.+||+.||.+|||
T Consensus 235 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt- 313 (330)
T 3nsz_A 235 HDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLT- 313 (330)
T ss_dssp SSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCC-
T ss_pred CchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCC-
Confidence 3333222221 111111 111226889999999999999999999
Q ss_pred hhcHHHHHcCCCcCCCChh
Q 001869 946 HEGANEIKKHPFFKGVNWA 964 (1002)
Q Consensus 946 ~~~a~elL~Hp~f~~~~~~ 964 (1002)
++++|+||||+++.+.
T Consensus 314 ---a~e~l~hp~f~~~~~~ 329 (330)
T 3nsz_A 314 ---AREAMEHPYFYTVVKD 329 (330)
T ss_dssp ---HHHHHTSGGGTTCC--
T ss_pred ---HHHHhcCccHhhhccC
Confidence 9999999999998654
No 114
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.7e-41 Score=382.40 Aligned_cols=265 Identities=26% Similarity=0.351 Sum_probs=221.6
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (1002)
..++|++++.||+|+||.||+|.+..+++.||||++.... ........+.+|+.+++.++||||+++++++...+.+|+
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 101 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD-DDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYL 101 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCS-SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCC-CchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEE
Confidence 4579999999999999999999999999999999987642 344455677899999999999999999999999999999
Q ss_pred EEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCC
Q 001869 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
||||+.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 102 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 177 (331)
T 4aaa_A 102 VFEFVDHTILDDLELFP--NGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP-- 177 (331)
T ss_dssp EEECCSEEHHHHHHHST--TCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred EEecCCcchHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCC--
Confidence 99999999998887653 45999999999999999999999999999999999999999999999999998653211
Q ss_pred CCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001869 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
........||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+
T Consensus 178 -------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 232 (331)
T 4aaa_A 178 -------------------------GEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID 232 (331)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred -------------------------ccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH
Confidence 0112245789999999999875 68889999999999999999999999988877
Q ss_pred HHHHHHhC-------------------CCCCCC----------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCC
Q 001869 906 TFANILHK-------------------DLKFPS----------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHP 956 (1002)
Q Consensus 906 ~~~~i~~~-------------------~~~~~~----------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp 956 (1002)
.+..+... ....+. ...++..+.+||.+||+.||.+||| +.++|+||
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt----~~ell~hp 308 (331)
T 4aaa_A 233 QLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPF----CAELLHHD 308 (331)
T ss_dssp HHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCC----GGGGGGSH
T ss_pred HHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCC----HHHHhcCc
Confidence 66655421 111111 1246889999999999999999999 99999999
Q ss_pred CcCCCChhh
Q 001869 957 FFKGVNWAL 965 (1002)
Q Consensus 957 ~f~~~~~~~ 965 (1002)
||+...+..
T Consensus 309 ~f~~~~~~~ 317 (331)
T 4aaa_A 309 FFQMDGFAE 317 (331)
T ss_dssp HHHGGGHHH
T ss_pred hhccCChhh
Confidence 999876654
No 115
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.8e-41 Score=382.73 Aligned_cols=260 Identities=24% Similarity=0.377 Sum_probs=214.4
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCC--CCcceEEEEEEeCCe
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH--PFVPALYASFQTKTH 743 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h--pnIv~l~~~~~~~~~ 743 (1002)
+..+.|++++.||+|+||.||+|.+ .+++.||||++.... ........+.+|+.+++.+.| |||+++++++...+.
T Consensus 6 ~~~~~y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~ 83 (343)
T 3dbq_A 6 VKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 83 (343)
T ss_dssp SSSCEEEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred eecCEEEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeeccc-cchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCE
Confidence 4567899999999999999999998 568899999997653 345556788899999999976 999999999999999
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCC
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
+|+|||+ .+++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++ ++.+||+|||++.....
T Consensus 84 ~~lv~e~-~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~ 159 (343)
T 3dbq_A 84 IYMVMEC-GNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 159 (343)
T ss_dssp EEEEECC-CSEEHHHHHHHS--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC--
T ss_pred EEEEEeC-CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCc
Confidence 9999995 489999999875 4599999999999999999999999999999999999997 68999999999965432
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-----------CCCCChhhHHHHHHHHHHHH
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----------AGHTSAVDWWALGILLYEML 892 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----------~~~~~~sDIwSlGvil~ell 892 (1002)
... .......+||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 160 ~~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell 214 (343)
T 3dbq_A 160 DTT-------------------------SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 214 (343)
T ss_dssp -----------------------------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHH
T ss_pred ccc-------------------------cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHH
Confidence 110 011234579999999999865 66788999999999999999
Q ss_pred cCCCCCCCCCh-HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 893 YGYTPFRGKTR-QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 893 tG~~Pf~~~~~-~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
+|..||.+... ...+..++............+..+.+||.+||+.||.+||| +.++|+||||+.
T Consensus 215 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt----~~e~l~hp~~~~ 279 (343)
T 3dbq_A 215 YGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRIS----IPELLAHPYVQI 279 (343)
T ss_dssp HSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCC----HHHHHTSHHHHS
T ss_pred hCCCcchhhhhHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCC----HHHHHhCccccc
Confidence 99999987443 34455555544444444456788999999999999999999 999999999985
No 116
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=3e-41 Score=383.63 Aligned_cols=265 Identities=25% Similarity=0.320 Sum_probs=217.7
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe-------
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------- 740 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------- 740 (1002)
.++|++++.||+|+||.||+|.+..+++.||||++..... .......+.+|+.+++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSC-SSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccc-cccchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence 4689999999999999999999999999999999876532 22334567789999999999999999999976
Q ss_pred -CCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCc
Q 001869 741 -KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (1002)
Q Consensus 741 -~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~ 819 (1002)
.+.+|+||||+. ++|.+.+... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.
T Consensus 95 ~~~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 172 (351)
T 3mi9_A 95 CKGSIYLVFDFCE-HDLAGLLSNV-LVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 172 (351)
T ss_dssp --CEEEEEEECCS-EEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CCceEEEEEeccC-CCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence 457899999995 5787777654 3459999999999999999999999999999999999999999999999999996
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCC
Q 001869 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
........ ........+||+.|+|||++.+ ..++.++|||||||++|+|++|..||
T Consensus 173 ~~~~~~~~-----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf 229 (351)
T 3mi9_A 173 AFSLAKNS-----------------------QPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIM 229 (351)
T ss_dssp ECCCCSSS-----------------------SCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred cccccccc-----------------------cccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCC
Confidence 54321110 1112234679999999999976 45789999999999999999999999
Q ss_pred CCCChHHHHHHHHhCCCCCC--CCCC----------------------------CCHHHHHHHHHccccCcCCCCCChhc
Q 001869 899 RGKTRQKTFANILHKDLKFP--SSTP----------------------------TSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 899 ~~~~~~~~~~~i~~~~~~~~--~~~~----------------------------~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
.+.+.......+.......+ .... .++.+.+||.+||+.||.+|||
T Consensus 230 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t---- 305 (351)
T 3mi9_A 230 QGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRID---- 305 (351)
T ss_dssp CCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCC----
T ss_pred CCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCC----
Confidence 99888877776654211111 1111 2667899999999999999999
Q ss_pred HHHHHcCCCcCCCC
Q 001869 949 ANEIKKHPFFKGVN 962 (1002)
Q Consensus 949 a~elL~Hp~f~~~~ 962 (1002)
++++|+||||+...
T Consensus 306 ~~e~l~hp~f~~~~ 319 (351)
T 3mi9_A 306 SDDALNHDFFWSDP 319 (351)
T ss_dssp HHHHHTSGGGGSSS
T ss_pred HHHHhCCCCcCCCC
Confidence 99999999998743
No 117
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=3.9e-41 Score=382.57 Aligned_cols=307 Identities=22% Similarity=0.323 Sum_probs=233.5
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC-----C
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-----T 742 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-----~ 742 (1002)
.++|++.+.||+|+||.||+|.+..+|+.||||++... ........+.+|+.+++.++||||+++++++... .
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 87 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF--DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN 87 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC--SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc--ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence 47899999999999999999999999999999998643 2445566788999999999999999999988654 6
Q ss_pred eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccC
Q 001869 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
..|+||||+. ++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 88 ~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 88 EVYIIQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp CEEEEECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred eEEEEEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 7899999995 699999876 359999999999999999999999999999999999999999999999999997654
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
........ ...........+||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.
T Consensus 164 ~~~~~~~~-----------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 226 (353)
T 2b9h_A 164 ESAADNSE-----------------PTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGR 226 (353)
T ss_dssp ---------------------------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccC-----------------ccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 22111000 0000111234679999999998765 67888999999999999999999999998
Q ss_pred ChHHHHHHHHhC--CC----------------------CCCC------CCCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001869 902 TRQKTFANILHK--DL----------------------KFPS------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 902 ~~~~~~~~i~~~--~~----------------------~~~~------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
+....+..+... .. ..+. ...++..+.+||.+||+.||.+||| +.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~e 302 (353)
T 2b9h_A 227 DYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRIT----AKE 302 (353)
T ss_dssp SHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCC----HHH
T ss_pred CcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCC----HHH
Confidence 876665544321 00 0010 1357889999999999999999999 999
Q ss_pred HHcCCCcCCCChhhhhccCCCCCCCCCCCCccccccccCChhhHHHhhhcC
Q 001869 952 IKKHPFFKGVNWALVRCMNPPELDAPLFATDTEKEYKVVDPGMQDLQQNVF 1002 (1002)
Q Consensus 952 lL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1002)
+++||||+...+........|. +...+..+...++....+..+...++||
T Consensus 303 ll~hp~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (353)
T 2b9h_A 303 ALEHPYLQTYHDPNDEPEGEPI-PPSFFEFDHYKEALTTKDLKKLIWNEIF 352 (353)
T ss_dssp HHTSGGGTTTCCTTSSCCCCCC-CGGGGGGGCCSSCCCHHHHHHHHHHHHT
T ss_pred HhcCccccccCCcccccccCCC-CcceeeecchhhcCCHHHHHHHHHHHhh
Confidence 9999999998765432222211 1122333444444444444445555554
No 118
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=4.2e-41 Score=384.55 Aligned_cols=259 Identities=24% Similarity=0.382 Sum_probs=217.4
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC-----Ce
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-----TH 743 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-----~~ 743 (1002)
++|++++.||+|+||.||+|.+..+++.||||++... ........+.+|+.+++.++||||+++++++... ..
T Consensus 27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF--EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCT--TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccc--cCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 6899999999999999999999999999999998753 2445567888999999999999999999999754 47
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCC
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
+|+||||+. ++|.+++... .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 105 ~~iv~e~~~-~~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 180 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180 (364)
T ss_dssp EEEEEECCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred EEEEEcccC-cCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCC
Confidence 899999995 6999999763 499999999999999999999999999999999999999999999999999965431
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
... ........+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+
T Consensus 181 ~~~------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 236 (364)
T 3qyz_A 181 DHD------------------------HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236 (364)
T ss_dssp GGC------------------------BCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CCC------------------------ccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCC
Confidence 100 0111234589999999998755 458899999999999999999999999887
Q ss_pred hHHHHHHHHhCC----------------------CCCCC-------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001869 903 RQKTFANILHKD----------------------LKFPS-------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 903 ~~~~~~~i~~~~----------------------~~~~~-------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
..+.+..+.... .+.+. ...++.++.+||.+||+.||.+||| +.++|
T Consensus 237 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l 312 (364)
T 3qyz_A 237 YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIE----VEQAL 312 (364)
T ss_dssp GGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCC----HHHHH
T ss_pred hHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCC----HHHHh
Confidence 776666654310 00000 1346889999999999999999999 99999
Q ss_pred cCCCcCCC
Q 001869 954 KHPFFKGV 961 (1002)
Q Consensus 954 ~Hp~f~~~ 961 (1002)
+||||+..
T Consensus 313 ~hp~~~~~ 320 (364)
T 3qyz_A 313 AHPYLEQY 320 (364)
T ss_dssp TSGGGTTT
T ss_pred cCcchhhc
Confidence 99999986
No 119
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2.4e-41 Score=375.57 Aligned_cols=263 Identities=25% Similarity=0.447 Sum_probs=222.1
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.+.|++++.||+|+||.||+|.+..+++.||+|++... .......+.+|+.+++.++||||+++++++...+.+|+|
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 94 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIM 94 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC---CHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEE
Confidence 46899999999999999999999999999999998754 233456788899999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.....
T Consensus 95 ~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~---- 169 (302)
T 2j7t_A 95 IEFCPGGAVDAIMLEL-DRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK---- 169 (302)
T ss_dssp EECCTTEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHH----
T ss_pred EEeCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCccccc----
Confidence 9999999999998753 24599999999999999999999999999999999999999999999999998743110
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccc-----cCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII-----AGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l-----~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
.........||+.|+|||++ .+..++.++|||||||++|+|++|..||...+
T Consensus 170 -----------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 226 (302)
T 2j7t_A 170 -----------------------TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN 226 (302)
T ss_dssp -----------------------HHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred -----------------------cccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCC
Confidence 00112245799999999998 46678889999999999999999999999988
Q ss_pred hHHHHHHHHhCCCC-CCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhh
Q 001869 903 RQKTFANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWAL 965 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~-~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~ 965 (1002)
....+..+...... ......++..+.+||.+||+.||.+||| +.++++||||+.+.+..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~h~~~~~~~~~~ 286 (302)
T 2j7t_A 227 PMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPS----AAQLLEHPFVSSITSNK 286 (302)
T ss_dssp HHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCC----HHHHTTSTTTTTCCCCH
T ss_pred HHHHHHHHhccCCcccCCccccCHHHHHHHHHHcccChhhCCC----HHHHhcChHHhhhccch
Confidence 88777777765443 2233457889999999999999999999 99999999999987653
No 120
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.4e-41 Score=388.02 Aligned_cols=257 Identities=27% Similarity=0.463 Sum_probs=212.3
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe-----
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT----- 740 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~----- 740 (1002)
...++|++++.||+|+||.||+|.+..+|+.||||++..... ...+|+.+++.++||||++++++|..
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 76 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEE 76 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-------SCCHHHHHHTTCCCTTBCCEEEEEEEC----
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-------hHHHHHHHHHHcCCCCccchhheeeecCccc
Confidence 345789999999999999999999999999999999875421 12369999999999999999999843
Q ss_pred ---------------------------------CCeEEEEEecCCCCcHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHH
Q 001869 741 ---------------------------------KTHVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALE 785 (1002)
Q Consensus 741 ---------------------------------~~~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qil~aL~ 785 (1002)
..++++||||++ ++|.+.+.. .....+++..++.++.||+.||+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~ 155 (383)
T 3eb0_A 77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVG 155 (383)
T ss_dssp ---------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 345899999996 588777653 23456999999999999999999
Q ss_pred HHHHcCcccCCCCCCCEEEc-cCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcc
Q 001869 786 YLHCQGIIYRDLKPENVLLQ-GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEY 864 (1002)
Q Consensus 786 yLH~~gIiHrDLKP~NILl~-~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y 864 (1002)
|||++||+||||||+|||++ .++.+||+|||++...... .......||+.|
T Consensus 156 ~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~----------------------------~~~~~~~~t~~y 207 (383)
T 3eb0_A 156 FIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPS----------------------------EPSVAYICSRFY 207 (383)
T ss_dssp HHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTT----------------------------SCCCCCCCCSSC
T ss_pred HHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCC----------------------------CCCcCcccCCCc
Confidence 99999999999999999998 6889999999999654211 112345789999
Q ss_pred cccccccCC-CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC-----------------CCCCCC-------
Q 001869 865 IAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK-----------------DLKFPS------- 919 (1002)
Q Consensus 865 ~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~-----------------~~~~~~------- 919 (1002)
+|||++.+. .++.++|||||||++|+|++|..||.+.+..+.+..++.. ...++.
T Consensus 208 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (383)
T 3eb0_A 208 RAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWR 287 (383)
T ss_dssp CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHH
T ss_pred cCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHH
Confidence 999998775 4899999999999999999999999999888877776541 111111
Q ss_pred ---CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCC
Q 001869 920 ---STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 920 ---~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 962 (1002)
...++.++.+||.+||+.||.+||| +.++|+||||+.+.
T Consensus 288 ~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l~hp~f~~~~ 329 (383)
T 3eb0_A 288 KILPEGTPSLAIDLLEQILRYEPDLRIN----PYEAMAHPFFDHLR 329 (383)
T ss_dssp HHSCTTCCHHHHHHHHHHCCSSGGGSCC----HHHHHTSGGGHHHH
T ss_pred hhCCCCCCHHHHHHHHHHccCChhhCCC----HHHHhcCHHHHHHH
Confidence 1236788999999999999999999 99999999998753
No 121
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.3e-41 Score=382.26 Aligned_cols=270 Identities=21% Similarity=0.357 Sum_probs=210.5
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-----
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----- 742 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~----- 742 (1002)
.++|++++.||+|+||.||+|.+..+++.||||++.... .......+.+|+.+++.++||||+++++++.+.+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 82 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ 82 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS--TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC--chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhh
Confidence 357999999999999999999999999999999997543 3445678899999999999999999999986543
Q ss_pred ----------------------------------------------------eEEEEEecCCCCcHHHHHhhCCC-CCCC
Q 001869 743 ----------------------------------------------------HVCLITDYCPGGELFLLLDRQPT-KVLK 769 (1002)
Q Consensus 743 ----------------------------------------------------~~~lV~E~~~ggsL~~~l~~~~~-~~l~ 769 (1002)
++|+|||||+|++|.+++..... ...+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~ 162 (332)
T 3qd2_B 83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDRE 162 (332)
T ss_dssp HHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSC
T ss_pred hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchh
Confidence 38999999999999999986422 2356
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCcccc
Q 001869 770 EDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMA 849 (1002)
Q Consensus 770 ~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (1002)
...++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++............ ....
T Consensus 163 ~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~---------------~~~~ 227 (332)
T 3qd2_B 163 HGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV---------------LTPM 227 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC-------------------------
T ss_pred hHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccc---------------cccc
Confidence 6678999999999999999999999999999999999999999999999765432111000 0000
Q ss_pred ccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHH
Q 001869 850 EPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQ 929 (1002)
Q Consensus 850 ~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~ 929 (1002)
.........+||+.|+|||++.+..++.++|||||||++|+|++|..|+.. .......+.....+. .....++.+.+
T Consensus 228 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~ 304 (332)
T 3qd2_B 228 PAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME--RVRIITDVRNLKFPL-LFTQKYPQEHM 304 (332)
T ss_dssp ----CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH--HHHHHHHHHTTCCCH-HHHHHCHHHHH
T ss_pred cccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH--HHHHHHHhhccCCCc-ccccCChhHHH
Confidence 011223456899999999999999999999999999999999998777522 122222332322111 11234667899
Q ss_pred HHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 930 LMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 930 Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
||.+||+.||.+||| +.++++||||+++
T Consensus 305 li~~~l~~~p~~Rps----~~~~l~~~~f~~~ 332 (332)
T 3qd2_B 305 MVQDMLSPSPTERPE----ATDIIENAIFENL 332 (332)
T ss_dssp HHHHHHCSSGGGSCC----HHHHHHSTTCCCC
T ss_pred HHHHHccCCCCcCCC----HHHHhhchhhhcC
Confidence 999999999999999 9999999999874
No 122
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2.6e-41 Score=372.79 Aligned_cols=262 Identities=25% Similarity=0.377 Sum_probs=208.1
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
++..++|++++.||+|+||.||+|.+..+++.||+|++..... .......+..+..+++.++||||+++++++...+..
T Consensus 3 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~ 81 (290)
T 3fme_A 3 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN-SQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDV 81 (290)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---C-HHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSE
T ss_pred cccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccC-cHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCE
Confidence 3556899999999999999999999999999999999976421 222333344455557888999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHc-CcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 745 CLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~-gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
|+||||++ ++|.+++.. .....+++..++.++.||+.||+|||++ ||+||||||+||+++.++.+||+|||++...
T Consensus 82 ~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 82 WICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp EEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred EEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 99999996 588877754 2345699999999999999999999998 9999999999999999999999999998653
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccc----cCCCCCChhhHHHHHHHHHHHHcCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII----AGAGHTSAVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l----~~~~~~~~sDIwSlGvil~elltG~~P 897 (1002)
... .......||+.|+|||++ .+..++.++|||||||++|+|++|..|
T Consensus 161 ~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p 212 (290)
T 3fme_A 161 VDD----------------------------VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFP 212 (290)
T ss_dssp -------------------------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCS
T ss_pred ccc----------------------------ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 211 111234699999999996 556788899999999999999999999
Q ss_pred CCC-CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 898 FRG-KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 898 f~~-~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
|.. ......+...............++..+.+||.+||+.||.+||| +.++++||||+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~e~l~hp~f~~ 272 (290)
T 3fme_A 213 YDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPT----YPELMQHPFFTL 272 (290)
T ss_dssp SCCCSCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCC----HHHHTTSHHHHH
T ss_pred ccccCchHHHHHHHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcC----HHHHHhCccccc
Confidence 986 45555555666555444444567899999999999999999999 999999999975
No 123
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=5.5e-41 Score=384.63 Aligned_cols=259 Identities=26% Similarity=0.406 Sum_probs=218.8
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE---
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV--- 744 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~--- 744 (1002)
.++|++.+.||+|+||.||+|.+..+|+.||||++.... ........+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccc-cchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 379999999999999999999999999999999997643 3445567888999999999999999999999876654
Q ss_pred ---EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 745 ---CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 745 ---~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
|+||||+. ++|.+++.. .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++...
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 194 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMGM----EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHA 194 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC---
T ss_pred eeEEEEEcccc-ccHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCccccc
Confidence 99999995 788888743 3999999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
.. .....+||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+
T Consensus 195 ~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 244 (371)
T 4exu_A 195 DA------------------------------EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 244 (371)
T ss_dssp -----------------------------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cc------------------------------CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCC
Confidence 21 1123578999999999987 6788999999999999999999999999
Q ss_pred CChHHHHHHHHhCCC-----------------------CCCC------CCCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001869 901 KTRQKTFANILHKDL-----------------------KFPS------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~-----------------------~~~~------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
.+..+.+..+..... ..+. ...++..+.+||.+||+.||.+||| +.+
T Consensus 245 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~e 320 (371)
T 4exu_A 245 KDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLT----AAQ 320 (371)
T ss_dssp SSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCC----HHH
T ss_pred CChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCC----HHH
Confidence 888777776654110 0000 1346889999999999999999999 999
Q ss_pred HHcCCCcCCCChhhh
Q 001869 952 IKKHPFFKGVNWALV 966 (1002)
Q Consensus 952 lL~Hp~f~~~~~~~~ 966 (1002)
+|+||||+.+.....
T Consensus 321 ll~hp~f~~~~~~~~ 335 (371)
T 4exu_A 321 ALTHPFFEPFRDPEE 335 (371)
T ss_dssp HHTSGGGTTTCCGGG
T ss_pred HhcCcccccCCCccc
Confidence 999999998765544
No 124
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.2e-41 Score=396.48 Aligned_cols=264 Identities=32% Similarity=0.495 Sum_probs=211.5
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccC-----hhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-----RNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~-----~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (1002)
.++|++.+.||+|+||.||+|.+..+++.||||++.+..... ......+.+|+.+|++++||||+++++++.. +
T Consensus 134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~ 212 (419)
T 3i6u_A 134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-E 212 (419)
T ss_dssp HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-S
T ss_pred hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-C
Confidence 468999999999999999999999999999999998653321 1222357789999999999999999999865 5
Q ss_pred eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCC---cEEEEeccCCc
Q 001869 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLTDFDLSC 819 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g---~vkL~DFG~a~ 819 (1002)
..|+|||||++++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||++.
T Consensus 213 ~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~ 290 (419)
T 3i6u_A 213 DYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 290 (419)
T ss_dssp EEEEEEECCTTCBGGGGTSSS--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTT
T ss_pred ceEEEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccce
Confidence 579999999999999988654 4599999999999999999999999999999999999997544 59999999996
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC---CCCCChhhHHHHHHHHHHHHcCCC
Q 001869 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYT 896 (1002)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~---~~~~~~sDIwSlGvil~elltG~~ 896 (1002)
..... ......+||+.|+|||++.+ ..++.++|||||||++|+|++|..
T Consensus 291 ~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~ 342 (419)
T 3i6u_A 291 ILGET----------------------------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP 342 (419)
T ss_dssp SCC---------------------------------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSC
T ss_pred ecCCC----------------------------ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCC
Confidence 54311 11234679999999999864 567789999999999999999999
Q ss_pred CCCCCChH-HHHHHHHhCCCCCCC--CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhh
Q 001869 897 PFRGKTRQ-KTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 966 (1002)
Q Consensus 897 Pf~~~~~~-~~~~~i~~~~~~~~~--~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~ 966 (1002)
||.+.... .....+......++. ...++..+.+||.+||+.||.+||| ++++|+||||+..+|...
T Consensus 343 pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps----~~e~l~hp~~~~~~~~~~ 411 (419)
T 3i6u_A 343 PFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT----TEEALRHPWLQDEDMKRK 411 (419)
T ss_dssp SSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCC----HHHHHHSGGGCCHHHHHH
T ss_pred CCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcC----HHHHhCCcccCChhHHHH
Confidence 99875443 233344444443322 2457889999999999999999999 999999999998776643
No 125
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=5.2e-41 Score=387.25 Aligned_cols=261 Identities=24% Similarity=0.367 Sum_probs=216.4
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC--CCCcceEEEEEEeCCe
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD--HPFVPALYASFQTKTH 743 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~--hpnIv~l~~~~~~~~~ 743 (1002)
+....|++++.||+|+||.||+|.+.. ++.||||++..... .......+.+|+.+++.+. ||||+++++++...+.
T Consensus 53 ~~~~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~ 130 (390)
T 2zmd_A 53 VKGRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 130 (390)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred ccCCceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccc-cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCE
Confidence 344579999999999999999999865 89999999976532 4556678899999999996 5999999999999999
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCC
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
+|+|||+ .+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||++.....
T Consensus 131 ~~lv~E~-~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~ 206 (390)
T 2zmd_A 131 IYMVMEC-GNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 206 (390)
T ss_dssp EEEEEEC-CSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred EEEEEec-CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence 9999994 589999999875 4589999999999999999999999999999999999996 68999999999965431
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-----------CCCCChhhHHHHHHHHHHHH
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----------AGHTSAVDWWALGILLYEML 892 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----------~~~~~~sDIwSlGvil~ell 892 (1002)
... .......+||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 207 ~~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell 261 (390)
T 2zmd_A 207 DTT-------------------------SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 261 (390)
T ss_dssp --------------------------------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHH
T ss_pred CCc-------------------------cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHH
Confidence 110 011234579999999999875 36788999999999999999
Q ss_pred cCCCCCCCCC-hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 893 YGYTPFRGKT-RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 893 tG~~Pf~~~~-~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
+|..||.+.. ....+..++......+.....+..+.+||.+||..||.+||| +.++|+||||+..
T Consensus 262 ~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps----~~ell~hp~~~~~ 327 (390)
T 2zmd_A 262 YGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRIS----IPELLAHPYVQIQ 327 (390)
T ss_dssp HSSCTTTTCCCHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCC----HHHHHTSHHHHSC
T ss_pred HCCCcchhhhHHHHHHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCC----HHHHhhCcCcccc
Confidence 9999998754 345566666655444444456889999999999999999999 9999999999864
No 126
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1e-40 Score=372.55 Aligned_cols=257 Identities=23% Similarity=0.359 Sum_probs=214.3
Q ss_pred cccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 001869 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (1002)
..+..++|++.+.||+|+||.||+|.+ ++..||||++.... ........+.+|+.++++++||||+++++++...+.
T Consensus 32 ~~i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 108 (309)
T 3p86_A 32 MDIPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQD-FHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPN 108 (309)
T ss_dssp CBCCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCC-CSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTC
T ss_pred ccCChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCC-CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCc
Confidence 356678999999999999999999987 68899999987653 245556788999999999999999999999999999
Q ss_pred EEEEEecCCCCcHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcC--cccCCCCCCCEEEccCCcEEEEeccCCcc
Q 001869 744 VCLITDYCPGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~-~~l~~~~i~~i~~qil~aL~yLH~~g--IiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
+|+||||+++++|.+++..... ..+++..++.++.||+.||+|||++| |+||||||+|||++.++.+||+|||++..
T Consensus 109 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 188 (309)
T 3p86_A 109 LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL 188 (309)
T ss_dssp CEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC----
T ss_pred eEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCcc
Confidence 9999999999999999976321 23899999999999999999999999 99999999999999999999999999854
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001869 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
.... ........||+.|+|||++.+..++.++|||||||++|+|++|..||.+
T Consensus 189 ~~~~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~ 241 (309)
T 3p86_A 189 KAST---------------------------FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGN 241 (309)
T ss_dssp ----------------------------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTT
T ss_pred cccc---------------------------ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 3211 1112345799999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 901 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
.+.......+............++..+.+||.+||+.||.+||| +.++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps----~~~ll~ 291 (309)
T 3p86_A 242 LNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPS----FATIMD 291 (309)
T ss_dssp SCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred CCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcC----HHHHHH
Confidence 98888777776555555555668999999999999999999999 666655
No 127
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.7e-41 Score=376.60 Aligned_cols=274 Identities=25% Similarity=0.403 Sum_probs=201.4
Q ss_pred cccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 001869 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (1002)
+.+..++|++.+.||+|+||.||+|.+..+++.||||++.... .......+.+|+.+++.++||||+++++++...+.
T Consensus 10 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 87 (303)
T 2vwi_A 10 WSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK--CQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDE 87 (303)
T ss_dssp ---CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC------------------CCCCCCCTTBCCEEEEEESSSC
T ss_pred cccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhh--cchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCC
Confidence 3467789999999999999999999998899999999886542 12345667889999999999999999999999999
Q ss_pred EEEEEecCCCCcHHHHHhh------CCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccC
Q 001869 744 VCLITDYCPGGELFLLLDR------QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~------~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~ 817 (1002)
.|+||||+++++|.+++.. .....+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+
T Consensus 88 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 167 (303)
T 2vwi_A 88 LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGV 167 (303)
T ss_dssp EEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred cEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccc
Confidence 9999999999999999874 1235699999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCC
Q 001869 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYT 896 (1002)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~ 896 (1002)
+......... ..........||+.|+|||++.+ ..++.++|||||||++|+|++|..
T Consensus 168 ~~~~~~~~~~----------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~ 225 (303)
T 2vwi_A 168 SAFLATGGDI----------------------TRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAA 225 (303)
T ss_dssp HHHCC-------------------------------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred hheeccCCCc----------------------cchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCC
Confidence 8654321100 00112234579999999999876 567899999999999999999999
Q ss_pred CCCCCChHHHHHHHHhCCCCCC--------CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhh
Q 001869 897 PFRGKTRQKTFANILHKDLKFP--------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWAL 965 (1002)
Q Consensus 897 Pf~~~~~~~~~~~i~~~~~~~~--------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~ 965 (1002)
||.+.................. ....++..+.+||.+||+.||.+||| +.++++||||+...+..
T Consensus 226 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~ll~h~~~~~~~~~~ 298 (303)
T 2vwi_A 226 PYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT----AAELLRHKFFQKAKNKE 298 (303)
T ss_dssp TTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCC----HHHHHTSTTC-------
T ss_pred CCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcC----HHHHhhChhhhcCCCCc
Confidence 9988777666655554432211 12346789999999999999999999 99999999999876543
No 128
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.2e-40 Score=388.13 Aligned_cols=258 Identities=29% Similarity=0.453 Sum_probs=211.7
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe------C
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------K 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------~ 741 (1002)
...|++++.||+|+||.||+|.+..+++.||||++..... ...+|+.+++.++||||++++++|.. .
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~ 125 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDE 125 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTE
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-------hHHHHHHHHHHcCCCCccceeeEEeccCCCCcc
Confidence 3479999999999999999999999999999999875421 22369999999999999999999853 2
Q ss_pred CeEEEEEecCCCCcHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccC-CcEEEEeccCC
Q 001869 742 THVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLS 818 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~-g~vkL~DFG~a 818 (1002)
.++++||||+++ +|.+++.. .....+++..++.++.||+.||+|||++||+||||||+|||++.+ +.+||+|||++
T Consensus 126 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a 204 (420)
T 1j1b_A 126 VYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 204 (420)
T ss_dssp EEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred eeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhh
Confidence 247899999954 67666543 234569999999999999999999999999999999999999965 67899999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCC
Q 001869 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~P 897 (1002)
+..... ......+||+.|+|||++.+. .++.++|||||||++|+|++|+.|
T Consensus 205 ~~~~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~p 256 (420)
T 1j1b_A 205 KQLVRG----------------------------EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 256 (420)
T ss_dssp EECCTT----------------------------CCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred hhcccC----------------------------CCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCC
Confidence 653211 112245789999999999765 789999999999999999999999
Q ss_pred CCCCChHHHHHHHHhC-----------------CCCCCC----------CCCCCHHHHHHHHHccccCcCCCCCChhcHH
Q 001869 898 FRGKTRQKTFANILHK-----------------DLKFPS----------STPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 950 (1002)
Q Consensus 898 f~~~~~~~~~~~i~~~-----------------~~~~~~----------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~ 950 (1002)
|.+.+..+.+..++.. .+.++. ....+.++++||.+||.+||.+||| +.
T Consensus 257 f~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t----~~ 332 (420)
T 1j1b_A 257 FPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT----PL 332 (420)
T ss_dssp SCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCC----HH
T ss_pred CCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCC----HH
Confidence 9998887777666541 122222 1245789999999999999999999 99
Q ss_pred HHHcCCCcCCCChhh
Q 001869 951 EIKKHPFFKGVNWAL 965 (1002)
Q Consensus 951 elL~Hp~f~~~~~~~ 965 (1002)
++++||||+.+.+..
T Consensus 333 e~l~hp~f~~~~~~~ 347 (420)
T 1j1b_A 333 EACAHSFFDELRDPN 347 (420)
T ss_dssp HHHTSGGGGGGGCTT
T ss_pred HHhCCHhhccccccc
Confidence 999999998765543
No 129
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=9.8e-41 Score=367.05 Aligned_cols=254 Identities=21% Similarity=0.309 Sum_probs=211.1
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~l 746 (1002)
.++|++++.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.++..+ +||||+++++++.+.+..|+
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLA-GSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCT-TSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccccc-ccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 3589999999999999999999999999999999986533 334456778899999999 99999999999999999999
Q ss_pred EEecCCCCcHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccC-----------------
Q 001869 747 ITDYCPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN----------------- 807 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~--~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~----------------- 807 (1002)
||||+++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~ 168 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWAS 168 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-------------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccC
Confidence 999999999999997531 2458999999999999999999999999999999999999844
Q ss_pred --CcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHH
Q 001869 808 --GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWAL 884 (1002)
Q Consensus 808 --g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSl 884 (1002)
..+||+|||++..... .....||+.|+|||++.+. .++.++|||||
T Consensus 169 ~~~~~kl~Dfg~~~~~~~-------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~sl 217 (289)
T 1x8b_A 169 NKVMFKIGDLGHVTRISS-------------------------------PQVEEGDSRFLANEVLQENYTHLPKADIFAL 217 (289)
T ss_dssp -CCCEEECCCTTCEETTC-------------------------------SCCCCCCGGGCCHHHHTTCCTTHHHHHHHHH
T ss_pred CceEEEEcccccccccCC-------------------------------ccccCCCccccChhHhcCCCCCCchhhHHHH
Confidence 4799999999855321 1123589999999999776 55679999999
Q ss_pred HHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 885 GILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 885 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
||++|+|++|.+|+..... ...+.....+ .....++..+.+||.+||+.||.+||| +.++++||||+..
T Consensus 218 G~il~~l~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~ll~h~~~~~~ 286 (289)
T 1x8b_A 218 ALTVVCAAGAEPLPRNGDQ---WHEIRQGRLP-RIPQVLSQEFTELLKVMIHPDPERRPS----AMALVKHSVLLSA 286 (289)
T ss_dssp HHHHHHHTTCCCCCSSSHH---HHHHHTTCCC-CCSSCCCHHHHHHHHHHTCSSGGGSCC----HHHHHTCTTC---
T ss_pred HHHHHHHhcCCCCCcchhH---HHHHHcCCCC-CCCcccCHHHHHHHHHHhCCCcccCCC----HHHHhhChHhhhh
Confidence 9999999999988765433 3344444332 222357899999999999999999999 9999999999863
No 130
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=8.5e-41 Score=376.65 Aligned_cols=257 Identities=24% Similarity=0.400 Sum_probs=216.5
Q ss_pred cccCCcccccccccCCcEEEEEEEE-cCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCC------CcceEEEEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVEL-CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHP------FVPALYASF 738 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~-~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp------nIv~l~~~~ 738 (1002)
+..++|++++.||+|+||.||+|.+ ..+++.||||++... ......+.+|+.+++.++|+ +|+++++++
T Consensus 11 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~ 86 (339)
T 1z57_A 11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV----DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWF 86 (339)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEE
T ss_pred CccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC----CchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccc
Confidence 3457999999999999999999999 568899999998743 34456778899999888654 599999999
Q ss_pred EeCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEcc------------
Q 001869 739 QTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG------------ 806 (1002)
Q Consensus 739 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~------------ 806 (1002)
...+.+|+||||+ +++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.
T Consensus 87 ~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~ 165 (339)
T 1z57_A 87 EHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIK 165 (339)
T ss_dssp EETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----
T ss_pred ccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccc
Confidence 9999999999999 999999998876567999999999999999999999999999999999999987
Q ss_pred -------CCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChh
Q 001869 807 -------NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAV 879 (1002)
Q Consensus 807 -------~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~s 879 (1002)
++.+||+|||++..... ......||+.|+|||++.+..++.++
T Consensus 166 ~~~~~~~~~~~kl~Dfg~~~~~~~------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~ 215 (339)
T 1z57_A 166 RDERTLINPDIKVVDFGSATYDDE------------------------------HHSTLVSTRHYRAPEVILALGWSQPC 215 (339)
T ss_dssp CEEEEESCCCEEECCCSSCEETTS------------------------------CCCSSCSCGGGCCHHHHTTSCCCTHH
T ss_pred cccccccCCCceEeeCcccccCcc------------------------------ccccccCCccccChHHhhCCCCCcch
Confidence 66899999999854221 11245799999999999999999999
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCC-----------------------------------------
Q 001869 880 DWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFP----------------------------------------- 918 (1002)
Q Consensus 880 DIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~----------------------------------------- 918 (1002)
|||||||++|+|++|..||.+.+..+....+.......|
T Consensus 216 Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (339)
T 1z57_A 216 DVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFM 295 (339)
T ss_dssp HHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGC
T ss_pred hhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhc
Confidence 999999999999999999998887665554432111111
Q ss_pred -CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 919 -SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 919 -~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
.....+..+.+||.+||+.||.+||| +.++++||||+.+
T Consensus 296 ~~~~~~~~~l~~li~~~L~~dP~~Rpt----~~ell~hp~f~~~ 335 (339)
T 1z57_A 296 LSQDVEHERLFDLIQKMLEYDPAKRIT----LREALKHPFFDLL 335 (339)
T ss_dssp SCCSHHHHHHHHHHHHHTCSSTTTSCC----HHHHTTSGGGGGG
T ss_pred ccchhhHHHHHHHHHHHhCcCcccccC----HHHHhcCHHHHHH
Confidence 01123467889999999999999999 9999999999874
No 131
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=374.89 Aligned_cols=256 Identities=25% Similarity=0.340 Sum_probs=216.2
Q ss_pred cccccCCcccccccccCCcEEEEEEEEcCCC---eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 001869 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSG---QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~---~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (1002)
..+..++|++.+.||+|+||.||+|.+..++ ..||||+++... .......+.+|+.+++.++||||+++++++.+
T Consensus 44 ~~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 121 (325)
T 3kul_A 44 REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY--TERQRRDFLSEASIMGQFDHPNIIRLEGVVTR 121 (325)
T ss_dssp CBCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECG
T ss_pred cccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 3566789999999999999999999997554 469999997542 34556788999999999999999999999999
Q ss_pred CCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcc
Q 001869 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
.+..|+||||++|++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 200 (325)
T 3kul_A 122 GRLAMIVTEYMENGSLDTFLRTH-DGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRV 200 (325)
T ss_dssp GGCCEEEEECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred CCccEEEeeCCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccc
Confidence 99999999999999999999654 34699999999999999999999999999999999999999999999999999976
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCC
Q 001869 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFR 899 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~ 899 (1002)
....... ........+|+.|+|||++.+..++.++|||||||++|+|++ |..||.
T Consensus 201 ~~~~~~~------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~ 256 (325)
T 3kul_A 201 LEDDPDA------------------------AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYW 256 (325)
T ss_dssp CC----C------------------------CEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred cccCccc------------------------eeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcc
Confidence 4322110 011123356889999999998889999999999999999998 999999
Q ss_pred CCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001869 900 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 900 ~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
+.........+... ...+....++..+.+||.+||..||.+|||+.+
T Consensus 257 ~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e 303 (325)
T 3kul_A 257 NMTNRDVISSVEEG-YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQ 303 (325)
T ss_dssp TSCHHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred cCCHHHHHHHHHcC-CCCCCCCCcCHHHHHHHHHHccCChhhCcCHHH
Confidence 98888877776654 344555568999999999999999999999443
No 132
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.8e-40 Score=372.75 Aligned_cols=264 Identities=25% Similarity=0.423 Sum_probs=220.0
Q ss_pred ccCCcccccccccCCcEEEEEEEEc-CCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC---CCCCcceEEEEEE---
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELC-GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML---DHPFVPALYASFQ--- 739 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l---~hpnIv~l~~~~~--- 739 (1002)
..++|++++.||+|+||.||+|.+. .+++.||+|++...... ......+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCT-TSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCccc-ccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 3578999999999999999999995 67899999998754321 11123455677776665 8999999999987
Q ss_pred --eCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccC
Q 001869 740 --TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (1002)
Q Consensus 740 --~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~ 817 (1002)
....+++||||+. ++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~ 166 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGL 166 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCcc
Confidence 5678999999996 6999999876656699999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCC
Q 001869 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~P 897 (1002)
+...... .......||+.|+|||++.+..++.++|||||||++|+|++|..|
T Consensus 167 ~~~~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p 218 (326)
T 1blx_A 167 ARIYSFQ----------------------------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPL 218 (326)
T ss_dssp CCCCCGG----------------------------GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred cccccCC----------------------------CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCC
Confidence 8543210 112345789999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHhCCC-----CCC--------------------CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHH
Q 001869 898 FRGKTRQKTFANILHKDL-----KFP--------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 952 (1002)
Q Consensus 898 f~~~~~~~~~~~i~~~~~-----~~~--------------------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~el 952 (1002)
|.+.+....+..++.... .++ ....++..+++||.+||..||.+||| +.++
T Consensus 219 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~e~ 294 (326)
T 1blx_A 219 FRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRIS----AYSA 294 (326)
T ss_dssp CCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCC----HHHH
T ss_pred CCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCC----HHHH
Confidence 999888877777764100 000 11346888999999999999999999 9999
Q ss_pred HcCCCcCCCChh
Q 001869 953 KKHPFFKGVNWA 964 (1002)
Q Consensus 953 L~Hp~f~~~~~~ 964 (1002)
++||||+.+.+.
T Consensus 295 l~hp~~~~~~~~ 306 (326)
T 1blx_A 295 LSHPYFQDLERC 306 (326)
T ss_dssp HTSGGGTTCCCC
T ss_pred hcCccccccchh
Confidence 999999988665
No 133
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.9e-40 Score=383.12 Aligned_cols=259 Identities=28% Similarity=0.441 Sum_probs=209.8
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-----
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----- 742 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~----- 742 (1002)
..+|++++.||+|+||.||+|.+..++. +|+|.+..... ...+|+.+++.++||||++++++|...+
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~-------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~ 110 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKR-------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDE 110 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTT-------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSC
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcc-------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCc
Confidence 4679999999999999999999977766 77777654321 1236999999999999999999996543
Q ss_pred -eEEEEEecCCCCcHHHHHh-hCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEc-cCCcEEEEeccCCc
Q 001869 743 -HVCLITDYCPGGELFLLLD-RQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-GNGHVSLTDFDLSC 819 (1002)
Q Consensus 743 -~~~lV~E~~~ggsL~~~l~-~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~-~~g~vkL~DFG~a~ 819 (1002)
.+|+|||||.++.+..... ......+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||+++
T Consensus 111 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 111 VFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 3889999996644433322 12235699999999999999999999999999999999999999 78999999999996
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcCCCCC
Q 001869 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
..... ......+||+.|+|||++.+. .++.++|||||||++|+|++|+.||
T Consensus 191 ~~~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf 242 (394)
T 4e7w_A 191 ILIAG----------------------------EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLF 242 (394)
T ss_dssp ECCTT----------------------------CCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred cccCC----------------------------CCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 54211 112245789999999999765 5899999999999999999999999
Q ss_pred CCCChHHHHHHHHhC-----------------CCCCCC----------CCCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001869 899 RGKTRQKTFANILHK-----------------DLKFPS----------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 899 ~~~~~~~~~~~i~~~-----------------~~~~~~----------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
.+.+..+.+..+... ...++. ....+.++.+||.+||++||.+||| +.+
T Consensus 243 ~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e 318 (394)
T 4e7w_A 243 PGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLT----AIE 318 (394)
T ss_dssp CCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCC----HHH
T ss_pred CCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCC----HHH
Confidence 999888777766541 111111 1236789999999999999999999 999
Q ss_pred HHcCCCcCCCChhhh
Q 001869 952 IKKHPFFKGVNWALV 966 (1002)
Q Consensus 952 lL~Hp~f~~~~~~~~ 966 (1002)
+++||||+.+.+...
T Consensus 319 ~l~hp~f~~~~~~~~ 333 (394)
T 4e7w_A 319 ALCHPFFDELRTGEA 333 (394)
T ss_dssp HHTSGGGSTTTSSCC
T ss_pred HhcChhhhhhccccc
Confidence 999999999887654
No 134
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.6e-40 Score=371.22 Aligned_cols=262 Identities=27% Similarity=0.427 Sum_probs=220.9
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (1002)
..+.|++++.||+|+||.||+|.+..+|+.||||.+.... ....+.+|+.+++.++||||+++++++...+.+|+
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 101 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI 101 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-----CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-----HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence 3568999999999999999999999999999999987542 23567889999999999999999999999999999
Q ss_pred EEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCC
Q 001869 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
||||+.+++|.+++... ...+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||++......
T Consensus 102 v~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~-- 178 (314)
T 3com_A 102 VMEYCGAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT-- 178 (314)
T ss_dssp EEECCTTEEHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTT--
T ss_pred EeecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhh--
Confidence 99999999999999743 346999999999999999999999999999999999999999999999999998653211
Q ss_pred CCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001869 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 906 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~ 906 (1002)
........||+.|+|||++.+..++.++|||||||++|+|++|..||.+......
T Consensus 179 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~ 233 (314)
T 3com_A 179 -------------------------MAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRA 233 (314)
T ss_dssp -------------------------BSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH
T ss_pred -------------------------ccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 1112345799999999999999999999999999999999999999998887766
Q ss_pred HHHHHhCCC-CCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhh
Q 001869 907 FANILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWAL 965 (1002)
Q Consensus 907 ~~~i~~~~~-~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~ 965 (1002)
...+..... .+.....++..+.+||.+||..||.+||| +.++++||||+..++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt----~~~ll~~~~~~~~~~~~ 289 (314)
T 3com_A 234 IFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRAT----ATQLLQHPFVRSAKGVS 289 (314)
T ss_dssp HHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCC----HHHHTTSHHHHTCCCGG
T ss_pred HHHHhcCCCcccCCcccCCHHHHHHHHHHccCChhhCcC----HHHHHhCHHHhcCCcch
Confidence 655554432 23333456889999999999999999999 99999999999876553
No 135
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=376.03 Aligned_cols=259 Identities=26% Similarity=0.405 Sum_probs=217.1
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe----
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH---- 743 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~---- 743 (1002)
.++|.+.+.||+|+||.||+|.+..+|+.||||++.... ........+.+|+.+++.++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 101 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 101 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence 368999999999999999999999999999999997642 344556788899999999999999999999987654
Q ss_pred --EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 744 --VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 744 --~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
+|+||||+. ++|.+++.. .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 176 (353)
T 3coi_A 102 YDFYLVMPFMQ-TDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHA 176 (353)
T ss_dssp CCCEEEEECCS-EEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred eeEEEEecccc-CCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCC
Confidence 599999995 688887743 3999999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
.. ......||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+
T Consensus 177 ~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 226 (353)
T 3coi_A 177 DA------------------------------EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 226 (353)
T ss_dssp -------------------------------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBS
T ss_pred CC------------------------------CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 21 1123578999999999977 6788899999999999999999999999
Q ss_pred CChHHHHHHHHhCC----------------------------CCCC-CCCCCCHHHHHHHHHccccCcCCCCCChhcHHH
Q 001869 901 KTRQKTFANILHKD----------------------------LKFP-SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 951 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~----------------------------~~~~-~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~e 951 (1002)
.+....+..+.... ..+. ....++..+.+||.+||+.||.+||| +.+
T Consensus 227 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt----~~e 302 (353)
T 3coi_A 227 KDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLT----AAQ 302 (353)
T ss_dssp SCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCC----HHH
T ss_pred CCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCC----HHH
Confidence 88776666554310 0111 12356889999999999999999999 999
Q ss_pred HHcCCCcCCCChhhh
Q 001869 952 IKKHPFFKGVNWALV 966 (1002)
Q Consensus 952 lL~Hp~f~~~~~~~~ 966 (1002)
+++||||+.+.....
T Consensus 303 ~l~hp~f~~~~~~~~ 317 (353)
T 3coi_A 303 ALTHPFFEPFRDPEE 317 (353)
T ss_dssp HHTSGGGTTTCCGGG
T ss_pred HhcCcchhhccCccc
Confidence 999999998765543
No 136
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=8.3e-41 Score=378.12 Aligned_cols=263 Identities=26% Similarity=0.390 Sum_probs=217.6
Q ss_pred ccccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHH-HHhCCCCCcceEEEEEEeC
Q 001869 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREI-LDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~i-l~~l~hpnIv~l~~~~~~~ 741 (1002)
...+..++|++++.||+|+||.||+|.+..+|+.||||++..... ......+..|..+ ++.++||||+++++++...
T Consensus 45 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~ 122 (340)
T 3an0_A 45 NFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN--SQEQKRLLMDLDISMRTVDCPFTVTFYGALFRE 122 (340)
T ss_dssp CCCCCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCC--CHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECS
T ss_pred ceEEehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccC--cHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeC
Confidence 345677899999999999999999999999999999999976532 2233455556555 6778999999999999999
Q ss_pred CeEEEEEecCCCCcHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHc-CcccCCCCCCCEEEccCCcEEEEeccCC
Q 001869 742 THVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~-gIiHrDLKP~NILl~~~g~vkL~DFG~a 818 (1002)
+.+|+||||+.+ +|.+++.. .....+++..++.++.||+.||+|||++ ||+||||||+|||++.++.+||+|||++
T Consensus 123 ~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~ 201 (340)
T 3an0_A 123 GDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS 201 (340)
T ss_dssp SCEEEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTTEEECSTTCEEECCCSHH
T ss_pred CcEEEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeCCCc
Confidence 999999999965 99888864 1345699999999999999999999997 9999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC----CCCCChhhHHHHHHHHHHHHcC
Q 001869 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG----AGHTSAVDWWALGILLYEMLYG 894 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~----~~~~~~sDIwSlGvil~elltG 894 (1002)
...... .......||+.|+|||++.+ ..++.++|||||||++|+|++|
T Consensus 202 ~~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg 253 (340)
T 3an0_A 202 GYLVDS----------------------------VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAIL 253 (340)
T ss_dssp HHHSCH----------------------------HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHT
T ss_pred eecccc----------------------------cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHC
Confidence 543210 01122469999999999743 4678899999999999999999
Q ss_pred CCCCCC-CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 895 YTPFRG-KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 895 ~~Pf~~-~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
..||.. ......+..+............++..+.+||.+||..||.+||| +.++++||||+.
T Consensus 254 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~ell~hp~f~~ 316 (340)
T 3an0_A 254 RFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPT----YPELMQHPFFTL 316 (340)
T ss_dssp SCSSCCCSCHHHHHHHHHHSCCCCCCGGGSCHHHHHHHHHHTCSSGGGSCC----HHHHTTSHHHHH
T ss_pred CCCCccccchHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCCcccCcC----HHHHhcCcCccc
Confidence 999986 34455556666554333333457889999999999999999999 999999999985
No 137
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=7.7e-41 Score=369.06 Aligned_cols=260 Identities=27% Similarity=0.459 Sum_probs=225.6
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.++|++++.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.+++.++||||+++++++...+.+|+|
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA-KNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGB-SSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEeccccc-chHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 4689999999999999999999999999999999976533 233456788999999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccC---CcEEEEeccCCcccCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~---g~vkL~DFG~a~~~~~~ 824 (1002)
|||+.+++|.+++... ..+++..++.++.||+.||.|||++||+|+||||+||+++.+ +.+||+|||++......
T Consensus 100 ~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~ 177 (287)
T 2wei_A 100 GELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (287)
T ss_dssp ECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCC
T ss_pred EEccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCC
Confidence 9999999999998764 359999999999999999999999999999999999999754 47999999998653211
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
.......||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+..
T Consensus 178 ----------------------------~~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~ 228 (287)
T 2wei_A 178 ----------------------------TKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEY 228 (287)
T ss_dssp ----------------------------SSCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred ----------------------------CccccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCCHH
Confidence 111234689999999998765 888999999999999999999999999888
Q ss_pred HHHHHHHhCCCCCC--CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCCh
Q 001869 905 KTFANILHKDLKFP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 963 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~--~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 963 (1002)
.....+..+...++ ....++.++.+||.+||+.||.+||| +.++++||||+...+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~ell~hp~~~~~~~ 285 (287)
T 2wei_A 229 DILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRIT----ATQCLEHPWIQKYSS 285 (287)
T ss_dssp HHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHHSHHHHHHCC
T ss_pred HHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcC----HHHHhcCHHHhcccc
Confidence 88888877765443 33567899999999999999999999 999999999987544
No 138
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=7.4e-41 Score=381.37 Aligned_cols=261 Identities=25% Similarity=0.359 Sum_probs=202.7
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC----
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT---- 742 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~---- 742 (1002)
..++|++++.||+|+||.||+|.+..+++.||||++..... ......+++..++.++||||+++++++...+
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~ 96 (360)
T 3e3p_A 21 EMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR----FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDR 96 (360)
T ss_dssp HHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT----CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCT
T ss_pred hccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc----ccHHHHHHHHHHHhcCCCCcccHHHhhhccccccc
Confidence 45799999999999999999999999999999999865422 2234566778888899999999999997543
Q ss_pred ---eEEEEEecCCCCcHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHH--HcCcccCCCCCCCEEEcc-CCcEEEEe
Q 001869 743 ---HVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLH--CQGIIYRDLKPENVLLQG-NGHVSLTD 814 (1002)
Q Consensus 743 ---~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH--~~gIiHrDLKP~NILl~~-~g~vkL~D 814 (1002)
++|+||||+.+ +|...+.. .....+++..++.++.||+.||.||| ++||+||||||+|||++. ++.+||+|
T Consensus 97 ~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~D 175 (360)
T 3e3p_A 97 RDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCD 175 (360)
T ss_dssp TCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECC
T ss_pred cceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEee
Confidence 38999999965 55544432 23456899999999999999999999 999999999999999996 89999999
Q ss_pred ccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCC-CCChhhHHHHHHHHHHHHc
Q 001869 815 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLY 893 (1002)
Q Consensus 815 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~~~~sDIwSlGvil~ellt 893 (1002)
||++...... .......||+.|+|||++.+.. ++.++|||||||++|+|++
T Consensus 176 fg~a~~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~ 227 (360)
T 3e3p_A 176 FGSAKKLSPS----------------------------EPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMML 227 (360)
T ss_dssp CTTCBCCCTT----------------------------SCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH
T ss_pred CCCceecCCC----------------------------CCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHh
Confidence 9999654311 1122457899999999987654 7999999999999999999
Q ss_pred CCCCCCCCChHHHHHHHHhCCCCC------------------------------CCCCCCCHHHHHHHHHccccCcCCCC
Q 001869 894 GYTPFRGKTRQKTFANILHKDLKF------------------------------PSSTPTSLHAKQLMYRLLHRDPKSRL 943 (1002)
Q Consensus 894 G~~Pf~~~~~~~~~~~i~~~~~~~------------------------------~~~~~~s~~~~~Ll~~~L~~dP~~Rp 943 (1002)
|..||.+.+....+..+....... ......+.++.+||.+||+.||.+||
T Consensus 228 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 307 (360)
T 3e3p_A 228 GEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERM 307 (360)
T ss_dssp SSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSC
T ss_pred CCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccC
Confidence 999999988887777765411000 01122567899999999999999999
Q ss_pred CChhcHHHHHcCCCcCCCChh
Q 001869 944 GSHEGANEIKKHPFFKGVNWA 964 (1002)
Q Consensus 944 t~~~~a~elL~Hp~f~~~~~~ 964 (1002)
| +.++|+||||+.+...
T Consensus 308 t----~~e~l~hp~f~~~~~~ 324 (360)
T 3e3p_A 308 K----PYEALCHPYFDELHDP 324 (360)
T ss_dssp C----HHHHTTSGGGGGGGCT
T ss_pred C----HHHHhcCccccccCCc
Confidence 9 9999999999986544
No 139
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2.9e-40 Score=378.39 Aligned_cols=258 Identities=20% Similarity=0.312 Sum_probs=217.3
Q ss_pred ccccCCcccccccccCCcEEEEEEEEc-------CCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELC-------GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYA 736 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~-------~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~ 736 (1002)
.+..++|++.+.||+|+||.||+|.+. .++..||||+++... .......+.+|+.+++.+ +||||+++++
T Consensus 77 ~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~ 154 (370)
T 2psq_A 77 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLG 154 (370)
T ss_dssp BCCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC--BHHHHHHHHHHHHHHHHSCCCTTBCCEEE
T ss_pred cccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc--CHHHHHHHHHHHHHHHHhcCCCCEeeEEE
Confidence 455679999999999999999999975 345689999997642 345567889999999999 8999999999
Q ss_pred EEEeCCeEEEEEecCCCCcHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCE
Q 001869 737 SFQTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 802 (1002)
Q Consensus 737 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NI 802 (1002)
++...+.+|+||||+.+|+|.+++.... ...++...+..++.||+.||+|||++||+||||||+||
T Consensus 155 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NI 234 (370)
T 2psq_A 155 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 234 (370)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGE
T ss_pred EEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhE
Confidence 9999999999999999999999998643 23588999999999999999999999999999999999
Q ss_pred EEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHH
Q 001869 803 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 882 (1002)
Q Consensus 803 Ll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIw 882 (1002)
|++.+|.+||+|||++........ ........||+.|+|||++.+..++.++|||
T Consensus 235 ll~~~~~~kl~DFG~a~~~~~~~~-------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvw 289 (370)
T 2psq_A 235 LVTENNVMKIADFGLARDINNIDY-------------------------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 289 (370)
T ss_dssp EECTTCCEEECCCSSCEETTCCCT-------------------------TCTTTTTTSCGGGCCHHHHHTCCCCHHHHHH
T ss_pred EECCCCCEEEccccCCcccCcccc-------------------------eecccCCCcccceECHhHhcCCCCCcHHHHH
Confidence 999999999999999965432110 0112234678999999999999999999999
Q ss_pred HHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 883 ALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 883 SlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
||||++|+|++ |..||.+....+.+..+..+. ..+....++..+.+||.+||+.||.+||| +.++++
T Consensus 290 slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dP~~Rpt----~~ell~ 357 (370)
T 2psq_A 290 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH-RMDKPANCTNELYMMMRDCWHAVPSQRPT----FKQLVE 357 (370)
T ss_dssp HHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC-CCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence 99999999998 999999888777666555443 33344567899999999999999999999 555554
No 140
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=3e-40 Score=367.15 Aligned_cols=256 Identities=28% Similarity=0.415 Sum_probs=224.1
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV 747 (1002)
.+.|++++.||+|+||.||+|.+..+++.||||++..... ......+.+|+.+++.++||||+++++++...+.+|+|
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 98 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWII 98 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC--STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEE
Confidence 3579999999999999999999999999999999976532 33457788999999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
|||+++++|.+++.. ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.+||+|||++.......
T Consensus 99 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 173 (303)
T 3a7i_A 99 MEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-- 173 (303)
T ss_dssp EECCTTEEHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB--
T ss_pred EEeCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCccc--
Confidence 999999999999865 458999999999999999999999999999999999999999999999999986543110
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 907 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~ 907 (1002)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||.........
T Consensus 174 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~ 228 (303)
T 3a7i_A 174 -------------------------IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVL 228 (303)
T ss_dssp -------------------------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred -------------------------cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHH
Confidence 1123457999999999999999999999999999999999999999988887776
Q ss_pred HHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 908 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 908 ~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
..+...... .....++..+.+||.+||+.||.+||| +.++++||||..
T Consensus 229 ~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~~~~~~~ 276 (303)
T 3a7i_A 229 FLIPKNNPP-TLEGNYSKPLKEFVEACLNKEPSFRPT----AKELLKHKFILR 276 (303)
T ss_dssp HHHHHSCCC-CCCSSCCHHHHHHHHHHCCSSGGGSCC----HHHHTTCHHHHH
T ss_pred HHhhcCCCC-CCccccCHHHHHHHHHHcCCChhhCcC----HHHHhhChhhhc
Confidence 666554432 223457889999999999999999999 999999999975
No 141
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=6.3e-41 Score=386.72 Aligned_cols=255 Identities=24% Similarity=0.382 Sum_probs=209.7
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC--------CCCcceEEEEE
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD--------HPFVPALYASF 738 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~--------hpnIv~l~~~~ 738 (1002)
..++|++++.||+|+||.||+|.+..+++.||||++... ......+.+|+.+++.+. |+||+++++++
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~ 110 (397)
T 1wak_A 35 FNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA----EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDF 110 (397)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEE
T ss_pred cCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC----CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecce
Confidence 357899999999999999999999999999999998743 345567888999999885 78899999999
Q ss_pred E----eCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CcccCCCCCCCEEEccCC-----
Q 001869 739 Q----TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNG----- 808 (1002)
Q Consensus 739 ~----~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~-gIiHrDLKP~NILl~~~g----- 808 (1002)
. ....+|+||||+ +++|.+++.......+++..++.++.||+.||+|||++ ||+||||||+|||++.++
T Consensus 111 ~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~ 189 (397)
T 1wak_A 111 KISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRR 189 (397)
T ss_dssp EEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHH
T ss_pred eecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhh
Confidence 7 567899999999 77777777665556799999999999999999999999 999999999999999775
Q ss_pred --------------------------------------------cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCC
Q 001869 809 --------------------------------------------HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQN 844 (1002)
Q Consensus 809 --------------------------------------------~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (1002)
.+||+|||++.....
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~--------------------- 248 (397)
T 1wak_A 190 LAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK--------------------- 248 (397)
T ss_dssp HHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTB---------------------
T ss_pred hhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccc---------------------
Confidence 799999999865321
Q ss_pred CccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC------hHHHHHHHHh--CCCC
Q 001869 845 PVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT------RQKTFANILH--KDLK 916 (1002)
Q Consensus 845 ~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~------~~~~~~~i~~--~~~~ 916 (1002)
.....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+ ....+..+.. +..+
T Consensus 249 ---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p 319 (397)
T 1wak_A 249 ---------HFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVP 319 (397)
T ss_dssp ---------CSCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCC
T ss_pred ---------cCccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCC
Confidence 1123479999999999999999999999999999999999999997654 2222222221 1100
Q ss_pred ----------------------C----------------CCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 917 ----------------------F----------------PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 917 ----------------------~----------------~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
. ......+..+.+||.+||+.||.+||| ++++|+||||
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~e~l~hp~~ 395 (397)
T 1wak_A 320 RKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRAT----AAECLRHPWL 395 (397)
T ss_dssp HHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCC----HHHHHTSGGG
T ss_pred hHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCC----HHHHhhCccc
Confidence 0 001122456889999999999999999 9999999999
Q ss_pred CC
Q 001869 959 KG 960 (1002)
Q Consensus 959 ~~ 960 (1002)
++
T Consensus 396 ~~ 397 (397)
T 1wak_A 396 NS 397 (397)
T ss_dssp GC
T ss_pred cC
Confidence 74
No 142
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.3e-40 Score=386.18 Aligned_cols=264 Identities=25% Similarity=0.387 Sum_probs=196.6
Q ss_pred CCccc-ccccccCCcEEEEEEEEc--CCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe--CCe
Q 001869 669 QHFRP-IKPLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTH 743 (1002)
Q Consensus 669 ~~y~i-~~~LG~G~~g~Vy~a~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~ 743 (1002)
+.|++ .++||+|+||.||+|.+. .+++.||||++..... ...+.+|+.+|+.++||||+++++++.. ...
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 94 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-----SMSACREIALLRELKHPNVISLQKVFLSHADRK 94 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-----CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-----CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCe
Confidence 45776 457999999999999975 5688999999875421 2357789999999999999999999954 678
Q ss_pred EEEEEecCCCCcHHHHHhhC-------CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEE----ccCCcEEE
Q 001869 744 VCLITDYCPGGELFLLLDRQ-------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL----QGNGHVSL 812 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~-------~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl----~~~g~vkL 812 (1002)
+|+||||+ +++|.+++... ....+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||
T Consensus 95 ~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl 173 (405)
T 3rgf_A 95 VWLLFDYA-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKI 173 (405)
T ss_dssp EEEEEECC-SEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred EEEEEeCC-CCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEE
Confidence 99999999 56888887632 12249999999999999999999999999999999999999 67789999
Q ss_pred EeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHH
Q 001869 813 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEM 891 (1002)
Q Consensus 813 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~el 891 (1002)
+|||++........ ........+||+.|+|||++.+. .++.++|||||||++|+|
T Consensus 174 ~Dfg~a~~~~~~~~------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~el 229 (405)
T 3rgf_A 174 ADMGFARLFNSPLK------------------------PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAEL 229 (405)
T ss_dssp CCTTCCC----------------------------------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHH
T ss_pred EECCCceecCCCCc------------------------ccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHH
Confidence 99999965431100 01122346899999999999874 588899999999999999
Q ss_pred HcCCCCCCCCCh---------HHHHHHHHhC--CCCCCC----------------------------------CCCCCHH
Q 001869 892 LYGYTPFRGKTR---------QKTFANILHK--DLKFPS----------------------------------STPTSLH 926 (1002)
Q Consensus 892 ltG~~Pf~~~~~---------~~~~~~i~~~--~~~~~~----------------------------------~~~~s~~ 926 (1002)
++|.+||.+... ...+..+... ...... ....+..
T Consensus 230 l~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (405)
T 3rgf_A 230 LTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSK 309 (405)
T ss_dssp HHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSH
T ss_pred HhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHH
Confidence 999999976543 2333333321 000000 0112567
Q ss_pred HHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhh
Q 001869 927 AKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 966 (1002)
Q Consensus 927 ~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~ 966 (1002)
+.+||.+||+.||.+||| ++++|+||||+...+...
T Consensus 310 ~~~Ll~~~L~~dP~~R~t----a~e~L~hp~f~~~~~~~~ 345 (405)
T 3rgf_A 310 AFHLLQKLLTMDPIKRIT----SEQAMQDPYFLEDPLPTS 345 (405)
T ss_dssp HHHHHHHHSCSSGGGSCC----HHHHHTSGGGTSSSCCCS
T ss_pred HHHHHHHHccCCcccCCC----HHHHhcChhhccCCCCcc
Confidence 899999999999999999 999999999998766544
No 143
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=371.64 Aligned_cols=263 Identities=24% Similarity=0.381 Sum_probs=213.4
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEE--------
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ-------- 739 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-------- 739 (1002)
.++|++++.||+|+||.||+|.+..+++.||+|++... .......+.+|+.+++.++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 86 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT---DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTD 86 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC---SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC---ChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccc
Confidence 47899999999999999999999999999999998753 4556678889999999999999999999873
Q ss_pred ------eCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEc-cCCcEEE
Q 001869 740 ------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-GNGHVSL 812 (1002)
Q Consensus 740 ------~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~-~~g~vkL 812 (1002)
..+..|+||||+. ++|.+++.. ..+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||
T Consensus 87 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl 162 (320)
T 2i6l_A 87 DVGSLTELNSVYIVQEYME-TDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKI 162 (320)
T ss_dssp ----CCSCSEEEEEEECCS-EEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEE
T ss_pred ccccccccCceeEEeeccC-CCHHHHhhc---CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEE
Confidence 4468899999996 699999865 4589999999999999999999999999999999999997 5679999
Q ss_pred EeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHH
Q 001869 813 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEM 891 (1002)
Q Consensus 813 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~el 891 (1002)
+|||++........ .........||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 163 ~Dfg~~~~~~~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el 218 (320)
T 2i6l_A 163 GDFGLARIMDPHYS------------------------HKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEM 218 (320)
T ss_dssp CCCTTCBCC--------------------------------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHH
T ss_pred ccCccccccCCCcc------------------------cccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHH
Confidence 99999865431100 0011223468999999999865 6788899999999999999
Q ss_pred HcCCCCCCCCChHHHHHHHHhCCCCC----------------------CC------CCCCCHHHHHHHHHccccCcCCCC
Q 001869 892 LYGYTPFRGKTRQKTFANILHKDLKF----------------------PS------STPTSLHAKQLMYRLLHRDPKSRL 943 (1002)
Q Consensus 892 ltG~~Pf~~~~~~~~~~~i~~~~~~~----------------------~~------~~~~s~~~~~Ll~~~L~~dP~~Rp 943 (1002)
++|+.||.+.+....+..+....... +. ...++..+++||.+||+.||.+||
T Consensus 219 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 298 (320)
T 2i6l_A 219 LTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRL 298 (320)
T ss_dssp HHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSC
T ss_pred HhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccC
Confidence 99999999988877776665432110 00 134688999999999999999999
Q ss_pred CChhcHHHHHcCCCcCCCChhh
Q 001869 944 GSHEGANEIKKHPFFKGVNWAL 965 (1002)
Q Consensus 944 t~~~~a~elL~Hp~f~~~~~~~ 965 (1002)
| +.++++||||+...|..
T Consensus 299 t----~~ell~hp~~~~~~~p~ 316 (320)
T 2i6l_A 299 T----AEEALSHPYMSIYSFPM 316 (320)
T ss_dssp C----HHHHHTSHHHHTTCC--
T ss_pred C----HHHHhCCcccccccCcc
Confidence 9 99999999999877654
No 144
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.7e-40 Score=378.86 Aligned_cols=259 Identities=24% Similarity=0.414 Sum_probs=210.3
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccc--------cChhHHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------LNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~--------~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 739 (1002)
.++|++++.||+|+||.||+|.+.. ++.||||++..... ........+.+|+.+++.++||||+++++++.
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 99 (362)
T 3pg1_A 21 QSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFV 99 (362)
T ss_dssp TCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEE
T ss_pred ccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEE
Confidence 4789999999999999999999854 89999999865322 23334578899999999999999999999985
Q ss_pred e-----CCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEe
Q 001869 740 T-----KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTD 814 (1002)
Q Consensus 740 ~-----~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~D 814 (1002)
. ...+|+||||+. ++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|
T Consensus 100 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~D 177 (362)
T 3pg1_A 100 HFEEPAMHKLYLVTELMR-TDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICD 177 (362)
T ss_dssp ECCTTTCCEEEEEEECCS-EEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred eccCCCcceEEEEEccCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEEe
Confidence 3 347899999995 6888888754 34699999999999999999999999999999999999999999999999
Q ss_pred ccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHHHHHHc
Q 001869 815 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLY 893 (1002)
Q Consensus 815 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil~ellt 893 (1002)
||++...... .......||+.|+|||++.+ ..++.++|||||||++|+|++
T Consensus 178 fg~~~~~~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~ 229 (362)
T 3pg1_A 178 FNLAREDTAD----------------------------ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN 229 (362)
T ss_dssp TTC-------------------------------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHH
T ss_pred cCcccccccc----------------------------cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHh
Confidence 9998542211 11234578999999999977 678899999999999999999
Q ss_pred CCCCCCCCChHHHHHHHHhCCC------------------------CCCC------CCCCCHHHHHHHHHccccCcCCCC
Q 001869 894 GYTPFRGKTRQKTFANILHKDL------------------------KFPS------STPTSLHAKQLMYRLLHRDPKSRL 943 (1002)
Q Consensus 894 G~~Pf~~~~~~~~~~~i~~~~~------------------------~~~~------~~~~s~~~~~Ll~~~L~~dP~~Rp 943 (1002)
|..||.+.+....+..+..... ..+. ....+..+.+||.+||+.||.+||
T Consensus 230 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 309 (362)
T 3pg1_A 230 RKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRI 309 (362)
T ss_dssp SSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred CCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCC
Confidence 9999999888777766643100 0110 134578899999999999999999
Q ss_pred CChhcHHHHHcCCCcCCC
Q 001869 944 GSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 944 t~~~~a~elL~Hp~f~~~ 961 (1002)
| +.++++||||+.+
T Consensus 310 t----~~ell~hp~f~~~ 323 (362)
T 3pg1_A 310 S----TEQALRHPYFESL 323 (362)
T ss_dssp C----HHHHHTSGGGTTT
T ss_pred C----HHHHHcCchhhhc
Confidence 9 9999999999986
No 145
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=4.3e-42 Score=393.79 Aligned_cols=262 Identities=21% Similarity=0.268 Sum_probs=201.7
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC--CCCCcceEE-------EEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML--DHPFVPALY-------ASFQ 739 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l--~hpnIv~l~-------~~~~ 739 (1002)
..|++++.||+|+||.||+|.+..+++.||||++.............+.+|+.+++.| +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 4699999999999999999999999999999999986544555667778886655555 699988755 4554
Q ss_pred eC-----------------CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHH------HHHHHHHHHHHHHHHHcCcccCC
Q 001869 740 TK-----------------THVCLITDYCPGGELFLLLDRQPTKVLKEDAV------RFYAAEVVVALEYLHCQGIIYRD 796 (1002)
Q Consensus 740 ~~-----------------~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i------~~i~~qil~aL~yLH~~gIiHrD 796 (1002)
.. ..+|+|||||+ ++|.+++.... ..++.... ..++.||+.||+|||++||+|||
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrD 219 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD-FVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGH 219 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETT
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCc
Confidence 33 34899999997 89999998642 22444445 56779999999999999999999
Q ss_pred CCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC--CC
Q 001869 797 LKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AG 874 (1002)
Q Consensus 797 LKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~--~~ 874 (1002)
|||+|||++.+|.+||+|||++..... ......||+.|+|||++.+ ..
T Consensus 220 ikp~NIll~~~~~~kL~DFG~a~~~~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~ 269 (371)
T 3q60_A 220 FTPDNLFIMPDGRLMLGDVSALWKVGT------------------------------RGPASSVPVTYAPREFLNASTAT 269 (371)
T ss_dssp CSGGGEEECTTSCEEECCGGGEEETTC------------------------------EEEGGGSCGGGCCHHHHTCSEEE
T ss_pred CCHHHEEECCCCCEEEEecceeeecCC------------------------------CccCccCCcCCcChhhccCCCCC
Confidence 999999999999999999999864321 0113457799999999987 67
Q ss_pred CCChhhHHHHHHHHHHHHcCCCCCCCCChHHH--HH-----HHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001869 875 HTSAVDWWALGILLYEMLYGYTPFRGKTRQKT--FA-----NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 875 ~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~--~~-----~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
++.++|||||||++|+|++|+.||.+...... +. ........++....++..+.+||.+||+.||.+|||
T Consensus 270 ~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt--- 346 (371)
T 3q60_A 270 FTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLL--- 346 (371)
T ss_dssp CCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCC---
T ss_pred cCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCC---
Confidence 89999999999999999999999987643210 00 001123344444578999999999999999999999
Q ss_pred cHHHHHcCCCcCCCChhhh
Q 001869 948 GANEIKKHPFFKGVNWALV 966 (1002)
Q Consensus 948 ~a~elL~Hp~f~~~~~~~~ 966 (1002)
+.++|+||||+.+.|...
T Consensus 347 -~~e~l~hp~f~~~~~~~~ 364 (371)
T 3q60_A 347 -PLEAMETPEFLQLQNEIS 364 (371)
T ss_dssp -HHHHTTSHHHHHHHHHHH
T ss_pred -HHHHhcCHHHHHHHHHHh
Confidence 999999999998877643
No 146
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.6e-40 Score=377.12 Aligned_cols=262 Identities=24% Similarity=0.364 Sum_probs=219.5
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCC-eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCC------cceEEEEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSG-QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF------VPALYASF 738 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~-~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpn------Iv~l~~~~ 738 (1002)
+..++|++++.||+|+||.||+|.+..++ ..||+|+++.. ......+.+|+.+++.+.|++ ++.+++++
T Consensus 16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 91 (355)
T 2eu9_A 16 WLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV----GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWF 91 (355)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEE
T ss_pred eecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc----ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeee
Confidence 34579999999999999999999998776 79999998743 334567788999999987655 89999999
Q ss_pred EeCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEE--------------
Q 001869 739 QTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL-------------- 804 (1002)
Q Consensus 739 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl-------------- 804 (1002)
...+.+|+||||+ +++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus 92 ~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~ 170 (355)
T 2eu9_A 92 NFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKS 170 (355)
T ss_dssp EETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-C
T ss_pred eeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccccccccccc
Confidence 9999999999999 7788888877655679999999999999999999999999999999999999
Q ss_pred -----ccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChh
Q 001869 805 -----QGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAV 879 (1002)
Q Consensus 805 -----~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~s 879 (1002)
+.++.+||+|||++..... .....+||+.|+|||++.+..++.++
T Consensus 171 ~~~~~~~~~~~kl~Dfg~~~~~~~------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~ 220 (355)
T 2eu9_A 171 CEEKSVKNTSIRVADFGSATFDHE------------------------------HHTTIVATRHYRPPEVILELGWAQPC 220 (355)
T ss_dssp CCEEEESCCCEEECCCTTCEETTS------------------------------CCCSSCSCGGGCCHHHHTTCCCCTHH
T ss_pred ccccccCCCcEEEeecCccccccc------------------------------cccCCcCCCcccCCeeeecCCCCCcc
Confidence 5678999999999854221 11245799999999999999999999
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCC-----------------------------------------
Q 001869 880 DWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFP----------------------------------------- 918 (1002)
Q Consensus 880 DIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~----------------------------------------- 918 (1002)
|||||||++|+|++|..||.+.+....+..+.......|
T Consensus 221 Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (355)
T 2eu9_A 221 DVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYM 300 (355)
T ss_dssp HHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGC
T ss_pred chHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccc
Confidence 999999999999999999998877665554433111111
Q ss_pred -CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhh
Q 001869 919 -SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 966 (1002)
Q Consensus 919 -~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~ 966 (1002)
.....+..+.+||.+||+.||.+||| +.++|+||||+++++...
T Consensus 301 ~~~~~~~~~l~~li~~~L~~dP~~Rpt----~~e~l~hp~f~~~~~~~~ 345 (355)
T 2eu9_A 301 LQDSLEHVQLFDLMRRMLEFDPAQRIT----LAEALLHPFFAGLTPEER 345 (355)
T ss_dssp SCCSHHHHHHHHHHHHHTCSSTTTSCC----HHHHTTSGGGGGCCHHHH
T ss_pred cccchhHHHHHHHHHHHhcCChhhCcC----HHHHhcChhhcCCChhhc
Confidence 01112457889999999999999999 999999999999988765
No 147
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.3e-40 Score=365.24 Aligned_cols=260 Identities=25% Similarity=0.451 Sum_probs=222.9
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEE--eCCeEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ--TKTHVC 745 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~--~~~~~~ 745 (1002)
.++|++++.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.+++.++||||+++++++. ....+|
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 83 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY 83 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccC-CHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence 4689999999999999999999999999999999986532 3455678889999999999999999999885 467899
Q ss_pred EEEecCCCCcHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcC-----cccCCCCCCCEEEccCCcEEEEeccCC
Q 001869 746 LITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQG-----IIYRDLKPENVLLQGNGHVSLTDFDLS 818 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~g-----IiHrDLKP~NILl~~~g~vkL~DFG~a 818 (1002)
+||||+++++|.+++... ....+++..++.++.||+.||+|||++| |+||||||+|||++.++.+||+|||++
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~ 163 (279)
T 2w5a_A 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163 (279)
T ss_dssp EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHH
T ss_pred EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchh
Confidence 999999999999999753 2345999999999999999999999999 999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCC
Q 001869 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
...... ........||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus 164 ~~~~~~---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~ 216 (279)
T 2w5a_A 164 RILNHD---------------------------TSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF 216 (279)
T ss_dssp HHC------------------------------CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSS
T ss_pred eeeccc---------------------------cccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence 553211 00112356899999999999988999999999999999999999999
Q ss_pred CCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 899 RGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 899 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
.+.+.......+..+... +....++..+.+||.+||+.||.+||| +.++++|+|+.+
T Consensus 217 ~~~~~~~~~~~i~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~ll~~~~~~~ 273 (279)
T 2w5a_A 217 TAFSQKELAGKIREGKFR-RIPYRYSDELNEIITRMLNLKDYHRPS----VEEILENPLILE 273 (279)
T ss_dssp CCSSHHHHHHHHHHTCCC-CCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHTSTTCCG
T ss_pred cccCHHHHHHHHhhcccc-cCCcccCHHHHHHHHHHcCCCcccCCC----HHHHHhChhhhh
Confidence 998888777777766542 222357889999999999999999999 999999999986
No 148
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.4e-40 Score=373.41 Aligned_cols=275 Identities=22% Similarity=0.303 Sum_probs=206.2
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCe---EEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQ---YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~---~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
.+..++|++++.||+|+||.||+|.+..++. .||||++..... .......+.+|+.+++.++||||+++++++...
T Consensus 19 ~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 97 (323)
T 3qup_A 19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII-ASSDIEEFLREAACMKEFDHPHVAKLVGVSLRS 97 (323)
T ss_dssp BCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC-------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC
T ss_pred ccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEeccccc-CHHHHHHHHHHHHHHHHCCCCceehhhceeecc
Confidence 3556799999999999999999999877765 899999976532 334567889999999999999999999999876
Q ss_pred CeE------EEEEecCCCCcHHHHHhhCC----CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEE
Q 001869 742 THV------CLITDYCPGGELFLLLDRQP----TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 811 (1002)
Q Consensus 742 ~~~------~lV~E~~~ggsL~~~l~~~~----~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vk 811 (1002)
... |+||||+.+++|.+++.... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+|
T Consensus 98 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 98 RAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEE
T ss_pred ccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEE
Confidence 654 99999999999999986532 12589999999999999999999999999999999999999999999
Q ss_pred EEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHH
Q 001869 812 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 891 (1002)
Q Consensus 812 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~el 891 (1002)
|+|||++........ ........+++.|+|||++.+..++.++|||||||++|+|
T Consensus 178 l~Dfg~a~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el 232 (323)
T 3qup_A 178 VADFGLSRKIYSGDY-------------------------YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEI 232 (323)
T ss_dssp ECCCCC------------------------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred Eeecccccccccccc-------------------------ccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHH
Confidence 999999965432110 0112234578899999999999999999999999999999
Q ss_pred Hc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh---cHHHHHcCCCcCCCChhhh
Q 001869 892 LY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE---GANEIKKHPFFKGVNWALV 966 (1002)
Q Consensus 892 lt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~---~a~elL~Hp~f~~~~~~~~ 966 (1002)
++ |..||.+.+..+....+.... ..+....++..+.+||.+||+.||.+|||+.+ .++++++|||+....+.-+
T Consensus 233 l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~~~pl 310 (323)
T 3qup_A 233 MTRGQTPYAGIENAEIYNYLIGGN-RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQDPL 310 (323)
T ss_dssp HTTSCCTTTTCCGGGHHHHHHTTC-CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-----------
T ss_pred HhCCCCCccccChHHHHHHHhcCC-CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCCCCCC
Confidence 99 999999988887777776654 33344567899999999999999999999764 4788999999998766544
No 149
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=6.9e-41 Score=375.92 Aligned_cols=262 Identities=32% Similarity=0.511 Sum_probs=213.8
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeeccccc-----ChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-----NRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (1002)
.++|++.+.||+|+||.||+|.+..+++.||||++...... .......+.+|+.+++.++||||+++++++...+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 35899999999999999999999999999999998764321 1223345778999999999999999999997765
Q ss_pred eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCc---EEEEeccCCc
Q 001869 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH---VSLTDFDLSC 819 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~---vkL~DFG~a~ 819 (1002)
.|+||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++. +||+|||++.
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~ 165 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTT--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCE
T ss_pred -eEEEEecCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccce
Confidence 89999999999999998754 56999999999999999999999999999999999999987654 9999999986
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCccccccccc---CCCCCChhhHHHHHHHHHHHHcCCC
Q 001869 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYT 896 (1002)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~~~~sDIwSlGvil~elltG~~ 896 (1002)
..... .......||+.|+|||++. ...++.++|||||||++|+|++|..
T Consensus 166 ~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~ 217 (322)
T 2ycf_A 166 ILGET----------------------------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP 217 (322)
T ss_dssp ECCCC----------------------------HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSC
T ss_pred ecccc----------------------------cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCC
Confidence 53211 0112356999999999974 4667889999999999999999999
Q ss_pred CCCCCChH-HHHHHHHhCCCCCCC--CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChh
Q 001869 897 PFRGKTRQ-KTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 964 (1002)
Q Consensus 897 Pf~~~~~~-~~~~~i~~~~~~~~~--~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~ 964 (1002)
||.+.... .....+......+.. ...++..+.+||.+||+.||.+||| +.++++||||+..++.
T Consensus 218 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps----~~~~l~h~~~~~~~~~ 284 (322)
T 2ycf_A 218 PFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT----TEEALRHPWLQDEDMK 284 (322)
T ss_dssp SSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCC----HHHHHTSGGGCCHHHH
T ss_pred CCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCC----HHHHhhCcCcCCHHHH
Confidence 99765443 233344444443321 2356889999999999999999999 9999999999997765
No 150
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=3.2e-42 Score=395.80 Aligned_cols=252 Identities=18% Similarity=0.157 Sum_probs=204.2
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHH---HHhCCCCCcceEE-------EE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREI---LDMLDHPFVPALY-------AS 737 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~i---l~~l~hpnIv~l~-------~~ 737 (1002)
.++|++.+.||+|+||.||+|.+..+|+.||||++.............+.+|+.+ ++.++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 4689999999999999999999999999999999986655556667888999955 4555899999998 77
Q ss_pred EEeCC-----------------eEEEEEecCCCCcHHHHHhhCCC-----CCCCHHHHHHHHHHHHHHHHHHHHcCcccC
Q 001869 738 FQTKT-----------------HVCLITDYCPGGELFLLLDRQPT-----KVLKEDAVRFYAAEVVVALEYLHCQGIIYR 795 (1002)
Q Consensus 738 ~~~~~-----------------~~~lV~E~~~ggsL~~~l~~~~~-----~~l~~~~i~~i~~qil~aL~yLH~~gIiHr 795 (1002)
+...+ ..|+||||+ +|+|.+++..... ..+++..++.++.||+.||+|||++||+||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHr 230 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT 230 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 76554 389999999 7899999986421 112247888899999999999999999999
Q ss_pred CCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC--
Q 001869 796 DLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-- 873 (1002)
Q Consensus 796 DLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-- 873 (1002)
||||+|||++.+|.+||+|||++.... ......+| +.|+|||++.+.
T Consensus 231 Dikp~NIll~~~~~~kL~DFG~a~~~~------------------------------~~~~~~~g-~~y~aPE~~~~~~~ 279 (377)
T 3byv_A 231 YLRPVDIVLDQRGGVFLTGFEHLVRDG------------------------------ARVVSSVS-RGFEPPELEARRAT 279 (377)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETT------------------------------CEEECCCC-TTCCCHHHHHHHTS
T ss_pred CCCHHHEEEcCCCCEEEEechhheecC------------------------------CcccCCCC-cCccChhhhccccc
Confidence 999999999999999999999985421 11224568 999999999887
Q ss_pred ---------CCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCC
Q 001869 874 ---------GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLG 944 (1002)
Q Consensus 874 ---------~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt 944 (1002)
.++.++|||||||++|+|++|+.||.+.+.......+.. ....++..+.+||.+||+.||.+|||
T Consensus 280 ~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~~~~------~~~~~~~~~~~li~~~L~~dp~~Rpt 353 (377)
T 3byv_A 280 ISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFR------SCKNIPQPVRALLEGFLRYPKEDRLL 353 (377)
T ss_dssp THHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGGGGS------SCCCCCHHHHHHHHHHTCSSGGGCCC
T ss_pred ccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhhhhh------hccCCCHHHHHHHHHHcCCCchhCCC
Confidence 889999999999999999999999977654433322222 22457889999999999999999999
Q ss_pred ChhcHHHHHcCCCcCCC
Q 001869 945 SHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 945 ~~~~a~elL~Hp~f~~~ 961 (1002)
+.++++||||+.+
T Consensus 354 ----~~e~l~hp~f~~~ 366 (377)
T 3byv_A 354 ----PLQAMETPEYEQL 366 (377)
T ss_dssp ----HHHHHTSHHHHHH
T ss_pred ----HHHHhhChHHHHH
Confidence 9999999999875
No 151
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.1e-40 Score=379.75 Aligned_cols=261 Identities=24% Similarity=0.357 Sum_probs=217.5
Q ss_pred cccccCCcccccccccCCcEEEEEEE-----EcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEE
Q 001869 664 EQINLQHFRPIKPLGSGDTGSVHLVE-----LCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYAS 737 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~-----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~ 737 (1002)
+.+..++|++++.||+|+||.||+|. +..+++.||||+++... .......+.+|+.++..+ +||||++++++
T Consensus 17 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpniv~~~~~ 94 (359)
T 3vhe_A 17 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGA 94 (359)
T ss_dssp HBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred ccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC--CHHHHHHHHHHHHHHHhhcCCcceeeeeee
Confidence 45667899999999999999999999 45567999999997542 344567789999999999 78999999999
Q ss_pred EEeCC-eEEEEEecCCCCcHHHHHhhCCC---------------------------------------------------
Q 001869 738 FQTKT-HVCLITDYCPGGELFLLLDRQPT--------------------------------------------------- 765 (1002)
Q Consensus 738 ~~~~~-~~~lV~E~~~ggsL~~~l~~~~~--------------------------------------------------- 765 (1002)
+...+ .+|+|||||.+|+|.+++.....
T Consensus 95 ~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (359)
T 3vhe_A 95 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLS 174 (359)
T ss_dssp ECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------------
T ss_pred eecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccc
Confidence 98754 58999999999999999976432
Q ss_pred -------------CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcc
Q 001869 766 -------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 832 (1002)
Q Consensus 766 -------------~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 832 (1002)
..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++........
T Consensus 175 ~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~------ 248 (359)
T 3vhe_A 175 DVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD------ 248 (359)
T ss_dssp ---------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT------
T ss_pred hhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeeccccc------
Confidence 1289999999999999999999999999999999999999999999999999965422110
Q ss_pred hhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHH
Q 001869 833 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANIL 911 (1002)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~ 911 (1002)
........||+.|+|||++.+..++.++|||||||++|+|++ |..||.+......+...+
T Consensus 249 -------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~ 309 (359)
T 3vhe_A 249 -------------------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 309 (359)
T ss_dssp -------------------CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHH
T ss_pred -------------------chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHH
Confidence 112234578999999999999999999999999999999998 999998877655555555
Q ss_pred hCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 912 HKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 912 ~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
......+....++.++.+||.+||+.||.+||| +.++++|
T Consensus 310 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps----~~ell~~ 349 (359)
T 3vhe_A 310 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT----FSELVEH 349 (359)
T ss_dssp HHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred HcCCCCCCCCCCCHHHHHHHHHHccCChhhCCC----HHHHHHH
Confidence 544444455568899999999999999999999 7777665
No 152
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2.3e-40 Score=380.93 Aligned_cols=256 Identities=26% Similarity=0.426 Sum_probs=214.3
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CC-----CcceEEEEEEeC
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HP-----FVPALYASFQTK 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp-----nIv~l~~~~~~~ 741 (1002)
.++|++++.||+|+||.||+|.+..+++.||||++... ......+..|+.+++.+. |+ +|+.+++++...
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 128 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK----KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR 128 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc----HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence 57999999999999999999999999999999998743 334566778888888884 54 499999999999
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH--HcCcccCCCCCCCEEEc--cCCcEEEEeccC
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH--CQGIIYRDLKPENVLLQ--GNGHVSLTDFDL 817 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH--~~gIiHrDLKP~NILl~--~~g~vkL~DFG~ 817 (1002)
+.+|+||||+ +++|.+++.......+++..++.++.||+.||.||| +.||+||||||+|||++ .++.+||+|||+
T Consensus 129 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~ 207 (382)
T 2vx3_A 129 NHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGS 207 (382)
T ss_dssp TEEEEEEECC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTT
T ss_pred CceEEEEecC-CCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccC
Confidence 9999999999 569999998765566999999999999999999999 57999999999999995 467899999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCC
Q 001869 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~P 897 (1002)
++.... .....+||+.|+|||++.+..++.++|||||||++|+|++|..|
T Consensus 208 a~~~~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p 257 (382)
T 2vx3_A 208 SCQLGQ------------------------------RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPL 257 (382)
T ss_dssp CEETTC------------------------------CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred ceeccc------------------------------ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 865321 11235799999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHhCCCCCC------------------C-------------------CC-------------------
Q 001869 898 FRGKTRQKTFANILHKDLKFP------------------S-------------------ST------------------- 921 (1002)
Q Consensus 898 f~~~~~~~~~~~i~~~~~~~~------------------~-------------------~~------------------- 921 (1002)
|.+.+..+.+..+.......+ . ..
T Consensus 258 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 337 (382)
T 2vx3_A 258 FSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAG 337 (382)
T ss_dssp SCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTT
T ss_pred CCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccc
Confidence 999888877776654210000 0 00
Q ss_pred ------CCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCC
Q 001869 922 ------PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 922 ------~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 962 (1002)
..+..+++||.+||++||.+||| ++++|+||||+...
T Consensus 338 ~~~~~~~~~~~~~dli~~mL~~dP~~Rpt----a~e~L~hp~f~~~~ 380 (382)
T 2vx3_A 338 ESGHTVADYLKFKDLILRMLDYDPKTRIQ----PYYALQHSFFKKTA 380 (382)
T ss_dssp CTTCCHHHHHHHHHHHHHHTCSCTTTSCC----HHHHTTSGGGCC--
T ss_pred cccccchhhHHHHHHHHHhcCCChhhCCC----HHHHhcCcccccCC
Confidence 00136899999999999999999 99999999999754
No 153
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.3e-40 Score=359.39 Aligned_cols=255 Identities=22% Similarity=0.356 Sum_probs=217.8
Q ss_pred cccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 001869 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (1002)
+.+..++|++++.||+|+||.||+|.+. +++.||+|++..... ....+.+|+.++++++||||+++++++.+.+.
T Consensus 5 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 79 (269)
T 4hcu_A 5 WVIDPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP 79 (269)
T ss_dssp CBCCGGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSB----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred EEeChhhceeeheecCCCccEEEEEEec-CCCeEEEEEeccccc----CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCc
Confidence 4466789999999999999999999986 577899999976432 23568889999999999999999999999999
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCC
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
.|+||||+++++|.+++... ...+++..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++.....
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 158 (269)
T 4hcu_A 80 ICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 158 (269)
T ss_dssp EEEEEECCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred eEEEEEeCCCCcHHHHHHhc-CcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccc
Confidence 99999999999999999754 34699999999999999999999999999999999999999999999999999865321
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCC
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 902 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~ 902 (1002)
.. ........||+.|+|||++.+..++.++|||||||++|+|++ |..||.+.+
T Consensus 159 ~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~ 212 (269)
T 4hcu_A 159 DQ--------------------------YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 212 (269)
T ss_dssp HH--------------------------HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred cc--------------------------cccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCC
Confidence 10 011223457889999999998899999999999999999999 999999988
Q ss_pred hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 903 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
.......+.... ........+..+.+||.+||+.||.+||| +.++++|
T Consensus 213 ~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~ll~~ 260 (269)
T 4hcu_A 213 NSEVVEDISTGF-RLYKPRLASTHVYQIMNHCWRERPEDRPA----FSRLLRQ 260 (269)
T ss_dssp HHHHHHHHHTTC-CCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred HHHHHHHHhcCc-cCCCCCcCCHHHHHHHHHHccCCcccCcC----HHHHHHH
Confidence 888777776653 33334457889999999999999999999 6777654
No 154
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=381.03 Aligned_cols=270 Identities=18% Similarity=0.235 Sum_probs=224.2
Q ss_pred ccccCCcccccccccCCcEEEEEEE-----EcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVE-----LCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~-----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 739 (1002)
.+..++|++++.||+|+||.||+|. +..+++.||||++... ........+.+|+.+++.++||||+++++++.
T Consensus 67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~ 144 (367)
T 3l9p_A 67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFNHQNIVRCIGVSL 144 (367)
T ss_dssp BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSS--CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc--cChhhHHHHHHHHHHHHhCCCCCCCeEEEEEe
Confidence 4566799999999999999999999 4567889999998653 23445567889999999999999999999999
Q ss_pred eCCeEEEEEecCCCCcHHHHHhhCC-----CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCC---cEE
Q 001869 740 TKTHVCLITDYCPGGELFLLLDRQP-----TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVS 811 (1002)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~~-----~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g---~vk 811 (1002)
.....|+|||||.||+|.+++.... ...++...++.++.||+.||+|||++||+||||||+|||++.+| .+|
T Consensus 145 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~k 224 (367)
T 3l9p_A 145 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAK 224 (367)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEE
T ss_pred cCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEE
Confidence 9999999999999999999998642 23589999999999999999999999999999999999999555 599
Q ss_pred EEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHH
Q 001869 812 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 891 (1002)
Q Consensus 812 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~el 891 (1002)
|+|||+++..... ..........||+.|+|||++.+..++.++|||||||++|+|
T Consensus 225 L~DFG~a~~~~~~-------------------------~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el 279 (367)
T 3l9p_A 225 IGDFGMARDIYRA-------------------------GYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 279 (367)
T ss_dssp ECCCHHHHHHHHH-------------------------SSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred ECCCccccccccc-------------------------cccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHH
Confidence 9999998543110 001122345789999999999999999999999999999999
Q ss_pred Hc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhh
Q 001869 892 LY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 966 (1002)
Q Consensus 892 lt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~ 966 (1002)
++ |..||.+.+..+.+..+..... .+....++..+.+||.+||+.||.+||| +.++++|.++-.-+....
T Consensus 280 lt~g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~l~~li~~~l~~dP~~Rps----~~eil~~l~~~~~~~~~~ 350 (367)
T 3l9p_A 280 FSLGYMPYPSKSNQEVLEFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPEDRPN----FAIILERIEYCTQDPDVI 350 (367)
T ss_dssp HTTSCCSSTTCCHHHHHHHHHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHHHHHHHHCHHHH
T ss_pred HhCCCCCCCCCCHHHHHHHHHcCCC-CCCCccCCHHHHHHHHHHcCCCHhHCcC----HHHHHHHHHHHhhChhhc
Confidence 98 9999999988888777766542 2334457889999999999999999999 899999887765444433
No 155
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.7e-40 Score=369.49 Aligned_cols=257 Identities=25% Similarity=0.393 Sum_probs=211.8
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC--e
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT--H 743 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~ 743 (1002)
+..++|++.+.||+|+||.||+|.+..+++.||||++..... ......+.+|+.+++.++||||+++++++...+ .
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 83 (319)
T 4euu_A 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRH 83 (319)
T ss_dssp CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG--GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCC
T ss_pred CCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCce
Confidence 345789999999999999999999999999999999976432 223566788999999999999999999998655 8
Q ss_pred EEEEEecCCCCcHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEE----ccCCcEEEEeccCC
Q 001869 744 VCLITDYCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL----QGNGHVSLTDFDLS 818 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~-~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl----~~~g~vkL~DFG~a 818 (1002)
+|+||||+++++|.+++.... ...+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a 163 (319)
T 4euu_A 84 KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (319)
T ss_dssp EEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred EEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence 899999999999999997642 2339999999999999999999999999999999999999 77788999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCccccccccc--------CCCCCChhhHHHHHHHHHH
Q 001869 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA--------GAGHTSAVDWWALGILLYE 890 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~--------~~~~~~~sDIwSlGvil~e 890 (1002)
...... .......||+.|+|||++. +..++.++|||||||++|+
T Consensus 164 ~~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~e 215 (319)
T 4euu_A 164 RELEDD----------------------------EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYH 215 (319)
T ss_dssp EECCTT----------------------------CCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHH
T ss_pred eecCCC----------------------------CceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHH
Confidence 654321 1122457999999999986 5778899999999999999
Q ss_pred HHcCCCCCCCC----ChHHHHHHHHhCCC-------------------CCCCCC----CCCHHHHHHHHHccccCcCCCC
Q 001869 891 MLYGYTPFRGK----TRQKTFANILHKDL-------------------KFPSST----PTSLHAKQLMYRLLHRDPKSRL 943 (1002)
Q Consensus 891 lltG~~Pf~~~----~~~~~~~~i~~~~~-------------------~~~~~~----~~s~~~~~Ll~~~L~~dP~~Rp 943 (1002)
|++|..||... ...+.+..++.+.. .++... .++..+.+||.+||+.||.+||
T Consensus 216 l~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~ 295 (319)
T 4euu_A 216 AATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCW 295 (319)
T ss_dssp HHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSC
T ss_pred HHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhc
Confidence 99999999643 23455555554432 112111 2345788999999999999999
Q ss_pred CChhcHHHHHcCC
Q 001869 944 GSHEGANEIKKHP 956 (1002)
Q Consensus 944 t~~~~a~elL~Hp 956 (1002)
| ++|+|+||
T Consensus 296 s----~~ell~h~ 304 (319)
T 4euu_A 296 G----FDQFFAET 304 (319)
T ss_dssp C----HHHHHHHH
T ss_pred c----HHHhhhcc
Confidence 9 99999997
No 156
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1e-39 Score=360.97 Aligned_cols=262 Identities=25% Similarity=0.351 Sum_probs=213.7
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
+..++|.....||+|+||.||+|.+..+++.||||.+... .......+.+|+.+++.++||||+++++++...+..+
T Consensus 19 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 95 (295)
T 2clq_A 19 YEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER---DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIK 95 (295)
T ss_dssp ECBCTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECC---CC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred ccccCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCC---chHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEE
Confidence 4456677777999999999999999999999999998754 2344567889999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEcc-CCcEEEEeccCCcccCC
Q 001869 746 LITDYCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~-~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~-~g~vkL~DFG~a~~~~~ 823 (1002)
+||||+++++|.+++.... ...+++..++.++.||+.||.|||++||+|+||||+||+++. ++.+||+|||++.....
T Consensus 96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~ 175 (295)
T 2clq_A 96 IFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 175 (295)
T ss_dssp EEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC
T ss_pred EEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCC
Confidence 9999999999999998642 235679999999999999999999999999999999999997 89999999999865321
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCC--CCChhhHHHHHHHHHHHHcCCCCCCCC
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG--HTSAVDWWALGILLYEMLYGYTPFRGK 901 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~--~~~~sDIwSlGvil~elltG~~Pf~~~ 901 (1002)
. ........||+.|+|||++.+.. ++.++|||||||++|+|++|..||...
T Consensus 176 ~---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 228 (295)
T 2clq_A 176 I---------------------------NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYEL 228 (295)
T ss_dssp --------------------------------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGG
T ss_pred C---------------------------CCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCC
Confidence 1 01122457999999999997653 788999999999999999999999764
Q ss_pred ChHH-HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 902 TRQK-TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 902 ~~~~-~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
.... .................++..+.+||.+||+.||.+||+ +.++++||||+..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~ll~~~~~~~~ 285 (295)
T 2clq_A 229 GEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRAC----ANDLLVDEFLKVS 285 (295)
T ss_dssp SSHHHHHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCC----HHHHHTSGGGCC-
T ss_pred CchhHHHHhhccccccccccccCCHHHHHHHHHHccCChhhCCC----HHHHhcChhhhhc
Confidence 3322 222222212222223457889999999999999999999 9999999999964
No 157
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=8.4e-40 Score=357.14 Aligned_cols=252 Identities=27% Similarity=0.419 Sum_probs=209.0
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccC-hhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-RNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
+..++|++.+.||+|+||.||+|.+ ++..+|+|++....... ......+.+|+.+++.++||||+++++++...+..
T Consensus 4 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (271)
T 3dtc_A 4 IDFAELTLEEIIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNL 81 (271)
T ss_dssp CCTTSEEEEEEEEEETTEEEEEEEE--TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--C
T ss_pred cchhheeeeeeeccCCCeEEEEEEE--cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCce
Confidence 4567999999999999999999998 48899999987643222 23356788999999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC---cccCCCCCCCEEEcc--------CCcEEEE
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG---IIYRDLKPENVLLQG--------NGHVSLT 813 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~g---IiHrDLKP~NILl~~--------~g~vkL~ 813 (1002)
|+||||+++++|.+++.. ..+++..++.++.||+.||.|||++| |+||||||+|||++. ++.+||+
T Consensus 82 ~lv~e~~~~~~L~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~ 158 (271)
T 3dtc_A 82 CLVMEFARGGPLNRVLSG---KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKIT 158 (271)
T ss_dssp EEEEECCTTEEHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEEC
T ss_pred EEEEEcCCCCCHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEc
Confidence 999999999999999864 45999999999999999999999999 999999999999985 7789999
Q ss_pred eccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc
Q 001869 814 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY 893 (1002)
Q Consensus 814 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt 893 (1002)
|||++...... ......||+.|+|||++.+..++.++|||||||++|+|++
T Consensus 159 Dfg~~~~~~~~-----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~ 209 (271)
T 3dtc_A 159 DFGLAREWHRT-----------------------------TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLT 209 (271)
T ss_dssp CCCC------------------------------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHH
T ss_pred cCCcccccccc-----------------------------cccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHh
Confidence 99998543211 1123469999999999999889999999999999999999
Q ss_pred CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 894 GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 894 G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
|..||.+.+.......+.......+....++..+.+||.+||+.||.+||| +.++++|
T Consensus 210 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~e~l~~ 267 (271)
T 3dtc_A 210 GEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPS----FTNILDQ 267 (271)
T ss_dssp CCCTTTTSCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred CCCCCCCCCHHHHHHhhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcC----HHHHHHH
Confidence 999999998888888887777766666778999999999999999999999 6776653
No 158
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.2e-40 Score=372.83 Aligned_cols=263 Identities=21% Similarity=0.303 Sum_probs=220.1
Q ss_pred ccccccCCcccccccccCCcEEEEEEEEc-----CCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEE
Q 001869 663 GEQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYA 736 (1002)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~ 736 (1002)
.+.+..++|++.+.||+|+||.||+|.+. .++..||+|++.... .......+.+|+.+++.+ +||||+++++
T Consensus 39 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 116 (344)
T 1rjb_A 39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA--DSSEREALMSELKMMTQLGSHENIVNLLG 116 (344)
T ss_dssp GGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred CcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeEEE
Confidence 34567789999999999999999999983 457789999997542 233456788999999999 8999999999
Q ss_pred EEEeCCeEEEEEecCCCCcHHHHHhhCCC---------------------CCCCHHHHHHHHHHHHHHHHHHHHcCcccC
Q 001869 737 SFQTKTHVCLITDYCPGGELFLLLDRQPT---------------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYR 795 (1002)
Q Consensus 737 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~---------------------~~l~~~~i~~i~~qil~aL~yLH~~gIiHr 795 (1002)
++...+.+|+||||+++++|.+++..... ..+++..++.++.||+.||.|||++||+||
T Consensus 117 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~ 196 (344)
T 1rjb_A 117 ACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHR 196 (344)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEET
T ss_pred EEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 99999999999999999999999976432 237999999999999999999999999999
Q ss_pred CCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCC
Q 001869 796 DLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH 875 (1002)
Q Consensus 796 DLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~ 875 (1002)
||||+|||++.++.+||+|||++....... .........||+.|+|||++.+..+
T Consensus 197 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~-------------------------~~~~~~~~~~t~~y~aPE~~~~~~~ 251 (344)
T 1rjb_A 197 DLAARNVLVTHGKVVKICDFGLARDIMSDS-------------------------NYVVRGNARLPVKWMAPESLFEGIY 251 (344)
T ss_dssp TCSGGGEEEETTTEEEECCCGGGSCGGGCT-------------------------TSEEETTEEECGGGCCHHHHHHCCC
T ss_pred CCChhhEEEcCCCcEEeCCCccCcccccCc-------------------------cceeccCccCccCccCHHHhccCCC
Confidence 999999999999999999999986542111 0112234568899999999998889
Q ss_pred CChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 876 TSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 876 ~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
+.++|||||||++|+|++ |..||.+......+..++......+....++..+.+||.+||+.||.+||| +.++++
T Consensus 252 ~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~l~~ 327 (344)
T 1rjb_A 252 TIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPS----FPNLTS 327 (344)
T ss_dssp CHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred ChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcC----HHHHHH
Confidence 999999999999999998 999998877666666777766666666668999999999999999999999 777766
Q ss_pred CC
Q 001869 955 HP 956 (1002)
Q Consensus 955 Hp 956 (1002)
|.
T Consensus 328 ~l 329 (344)
T 1rjb_A 328 FL 329 (344)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 159
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.1e-39 Score=355.48 Aligned_cols=251 Identities=19% Similarity=0.300 Sum_probs=218.8
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--C
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--T 742 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~ 742 (1002)
.+..++|++++.||+|+||.||+|.+ ++..||+|++.... ........+.+|+.+++.++||||+++++++.+. +
T Consensus 6 ~i~~~~y~~~~~lg~G~~g~V~~~~~--~~~~~avK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 82 (271)
T 3kmu_A 6 GIDFKQLNFLTKLNENHSGELWKGRW--QGNDIVVKVLKVRD-WSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82 (271)
T ss_dssp CCCGGGCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECCTT-CCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSS
T ss_pred CCCHHHhHHHHHhcCCCcceEEEEEE--CCeeEEEEEecccc-cCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCC
Confidence 46678999999999999999999998 48899999998653 2345567789999999999999999999999876 7
Q ss_pred eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--cccCCCCCCCEEEccCCcEEEEeccCCcc
Q 001869 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~g--IiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
..++||||+++++|.+++.......+++..++.++.||+.||.|||++| |+||||||+|||++.++.++|+|||++..
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 83 HPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp SCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred CeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceee
Confidence 8899999999999999998765556999999999999999999999999 99999999999999999999999998743
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCC---hhhHHHHHHHHHHHHcCCCC
Q 001869 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTS---AVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~---~sDIwSlGvil~elltG~~P 897 (1002)
.. .....||+.|+|||++.+..++. ++|||||||++|+|++|..|
T Consensus 163 ~~--------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p 210 (271)
T 3kmu_A 163 FQ--------------------------------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVP 210 (271)
T ss_dssp TS--------------------------------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCT
T ss_pred ec--------------------------------ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 21 12346899999999998766555 79999999999999999999
Q ss_pred CCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 898 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 898 f~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
|.+.+.......+............++..+.+||.+||+.||.+||| +.++++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il~ 263 (271)
T 3kmu_A 211 FADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPK----FDMIVP 263 (271)
T ss_dssp TTTSCHHHHHHHHHHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred ccccChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence 99998888888887776665556678999999999999999999999 555553
No 160
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.3e-39 Score=360.80 Aligned_cols=273 Identities=26% Similarity=0.461 Sum_probs=211.6
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe--------
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-------- 740 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-------- 740 (1002)
++|++++.||+|+||.||+|.+..+++.||||++... ......+.+|+.+++.++||||+++++++.+
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (303)
T 1zy4_A 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPM 81 (303)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC--
T ss_pred ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc----HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhh
Confidence 5799999999999999999999999999999998643 3456778899999999999999999998864
Q ss_pred -----CCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEec
Q 001869 741 -----KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 815 (1002)
Q Consensus 741 -----~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DF 815 (1002)
.+.+|+||||+++++|.+++... ...++...++.++.||+.||+|||++||+||||||+|||++.++.+||+||
T Consensus 82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~df 160 (303)
T 1zy4_A 82 TAVKKKSTLFIQMEYCENGTLYDLIHSE-NLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDF 160 (303)
T ss_dssp ----CEEEEEEEEECCCSCBHHHHHHHS-CGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCC
T ss_pred cccccCCceEEEEecCCCCCHHHhhhcc-ccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeC
Confidence 46789999999999999999864 345788999999999999999999999999999999999999999999999
Q ss_pred cCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-CCCChhhHHHHHHHHHHHHcC
Q 001869 816 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYG 894 (1002)
Q Consensus 816 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~~~~sDIwSlGvil~elltG 894 (1002)
|++............. ...............||+.|+|||++.+. .++.++|||||||++|+|++
T Consensus 161 g~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~- 226 (303)
T 1zy4_A 161 GLAKNVHRSLDILKLD-------------SQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY- 226 (303)
T ss_dssp CCCSCTTC--------------------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS-
T ss_pred cchhhcccccchhccc-------------cccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh-
Confidence 9996543211100000 00000111223456799999999999765 68899999999999999998
Q ss_pred CCCCCCC-ChHHHHHHHHhCCCCCCCC--CCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChhhh
Q 001869 895 YTPFRGK-TRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 966 (1002)
Q Consensus 895 ~~Pf~~~-~~~~~~~~i~~~~~~~~~~--~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~ 966 (1002)
||... +.......+......++.. ...+..+++||.+||+.||.+||| +.++++||||+...+...
T Consensus 227 --p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~ll~h~~~~~~~~~~~ 295 (303)
T 1zy4_A 227 --PFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPG----ARTLLNSGWLPVKHQDEV 295 (303)
T ss_dssp --CCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCC----HHHHHHSSCSCCCCHHHH
T ss_pred --ccCCchhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcC----HHHHhCCCCcCCCChHHH
Confidence 55432 3344445555444444432 345678999999999999999999 999999999998766543
No 161
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.4e-39 Score=366.56 Aligned_cols=274 Identities=21% Similarity=0.257 Sum_probs=217.9
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCe
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 743 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 743 (1002)
.+..++|++++.||+|+||.||+|.+..+++.||||++..... ...+.+|+.+++.+ +||||+++++++...+.
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 79 (330)
T 2izr_A 5 LMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR-----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKY 79 (330)
T ss_dssp CEETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS-----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTE
T ss_pred EEEcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc-----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCc
Confidence 3456789999999999999999999999999999999875422 23577899999999 99999999999999999
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCc-----EEEEeccCC
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH-----VSLTDFDLS 818 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~-----vkL~DFG~a 818 (1002)
.|+||||+ +++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++. +||+|||++
T Consensus 80 ~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a 157 (330)
T 2izr_A 80 NAMVLELL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157 (330)
T ss_dssp EEEEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTC
T ss_pred cEEEEEeC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccc
Confidence 99999999 99999999864 356999999999999999999999999999999999999998887 999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCC
Q 001869 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
......... ...+.......+||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus 158 ~~~~~~~~~--------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf 217 (330)
T 2izr_A 158 KEYIDPETK--------------------KHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPW 217 (330)
T ss_dssp EESBCTTTC--------------------CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred eeeecCCCC--------------------ccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCc
Confidence 764322110 001112234678999999999999999999999999999999999999999
Q ss_pred CCC---ChHHHHHHHHhCCCCCCCC--CCCCHHHHHHHHHccccCcCCCCCChhcHH---HHH---cCCCcCCCChhh
Q 001869 899 RGK---TRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGAN---EIK---KHPFFKGVNWAL 965 (1002)
Q Consensus 899 ~~~---~~~~~~~~i~~~~~~~~~~--~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~---elL---~Hp~f~~~~~~~ 965 (1002)
.+. ...+.+..+.......+.. ....+++.+||..||+.||.+||++.+..+ +++ ...+...++|..
T Consensus 218 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~~ 295 (330)
T 2izr_A 218 QGLKADTLKERYQKIGDTKRATPIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDWIG 295 (330)
T ss_dssp TTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCCSCCCTTTT
T ss_pred cccccccHHHHHHHHHhhhccCCHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCccCCC
Confidence 873 4445555554433222211 111238999999999999999999543222 222 245566788873
No 162
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=4e-40 Score=377.03 Aligned_cols=260 Identities=23% Similarity=0.386 Sum_probs=211.2
Q ss_pred ccccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-----------CCCc
Q 001869 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-----------HPFV 731 (1002)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-----------hpnI 731 (1002)
++.+..++|++++.||+|+||.||+|.+..+++.||||++... ......+.+|+.+++.+. ||||
T Consensus 13 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i 88 (373)
T 1q8y_A 13 GEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD----KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHI 88 (373)
T ss_dssp TCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTB
T ss_pred CCcccCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC----ccchhhhhHHHHHHHHhhcccccchhccccchH
Confidence 4456678999999999999999999999999999999998753 334566788999988875 8999
Q ss_pred ceEEEEEEeCC----eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CcccCCCCCCCEEEcc
Q 001869 732 PALYASFQTKT----HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQG 806 (1002)
Q Consensus 732 v~l~~~~~~~~----~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~-gIiHrDLKP~NILl~~ 806 (1002)
+++++++...+ .+++||||+ +++|.+++.......++...++.++.||+.||+|||++ ||+||||||+|||++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~ 167 (373)
T 1q8y_A 89 LKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEI 167 (373)
T ss_dssp CCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEE
T ss_pred HHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEec
Confidence 99999998654 889999999 99999999876556799999999999999999999998 9999999999999953
Q ss_pred ------CCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhh
Q 001869 807 ------NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVD 880 (1002)
Q Consensus 807 ------~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sD 880 (1002)
.+.+||+|||++..... ......||+.|+|||++.+..++.++|
T Consensus 168 ~~~~~~~~~~kl~Dfg~a~~~~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~D 217 (373)
T 1q8y_A 168 VDSPENLIQIKIADLGNACWYDE------------------------------HYTNSIQTREYRSPEVLLGAPWGCGAD 217 (373)
T ss_dssp EETTTTEEEEEECCCTTCEETTB------------------------------CCCSCCSCGGGCCHHHHHTCCCCTHHH
T ss_pred cCCCcCcceEEEcccccccccCC------------------------------CCCCCCCCccccCcHHHhCCCCCchHh
Confidence 34799999999865321 112347899999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCh------HHHHHHHHhCCCCC-------------------------------------
Q 001869 881 WWALGILLYEMLYGYTPFRGKTR------QKTFANILHKDLKF------------------------------------- 917 (1002)
Q Consensus 881 IwSlGvil~elltG~~Pf~~~~~------~~~~~~i~~~~~~~------------------------------------- 917 (1002)
||||||++|+|++|..||.+.+. ...+..+.......
T Consensus 218 i~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (373)
T 1q8y_A 218 IWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLT 297 (373)
T ss_dssp HHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhh
Confidence 99999999999999999986542 22222222100000
Q ss_pred ---CCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 918 ---PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 918 ---~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
.....++..+.+||.+||+.||.+||| +.++|+||||+..
T Consensus 298 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell~hp~f~~~ 340 (373)
T 1q8y_A 298 EKYKFSKDEAKEISDFLSPMLQLDPRKRAD----AGGLVNHPWLKDT 340 (373)
T ss_dssp HTTCCCHHHHHHHHHHHGGGGCSSTTTCBC----HHHHHTCGGGTTC
T ss_pred hcccCCcchHHHHHHHHHHHhccCccccCC----HHHHhhChhhhcc
Confidence 011224567889999999999999999 9999999999974
No 163
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=4e-40 Score=369.35 Aligned_cols=278 Identities=17% Similarity=0.223 Sum_probs=228.1
Q ss_pred cccccccCCcccccccccCCcEEEEEEEEc-----CCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEE
Q 001869 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYA 736 (1002)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~ 736 (1002)
..+.+..++|++.+.||+|+||.||+|.+. .+++.||+|.+.... .......+.+|+.+++.++||||+++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~ 95 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLG 95 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGCCCTTBCCEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc--CHHHHHHHHHHHHHHHhcCCCCEeeeEE
Confidence 345567789999999999999999999986 457899999987542 3445567889999999999999999999
Q ss_pred EEEeCCeEEEEEecCCCCcHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCC
Q 001869 737 SFQTKTHVCLITDYCPGGELFLLLDRQP--------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 808 (1002)
Q Consensus 737 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g 808 (1002)
++.+.+..|+||||+.+++|.+++.... ...++...+..++.||+.||.|||++||+||||||+|||++.++
T Consensus 96 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~ 175 (322)
T 1p4o_A 96 VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF 175 (322)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTC
T ss_pred EEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCC
Confidence 9999999999999999999999987521 13578999999999999999999999999999999999999999
Q ss_pred cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHH
Q 001869 809 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 888 (1002)
Q Consensus 809 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil 888 (1002)
.+||+|||++....... .........||+.|+|||++.+..++.++|||||||++
T Consensus 176 ~~kl~Dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 230 (322)
T 1p4o_A 176 TVKIGDFGMTRDIYETD-------------------------YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 230 (322)
T ss_dssp CEEECCTTCCCGGGGGG-------------------------CEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred eEEECcCcccccccccc-------------------------ccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHH
Confidence 99999999986432110 01112334678999999999988899999999999999
Q ss_pred HHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC--CCcCCCChhh
Q 001869 889 YEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH--PFFKGVNWAL 965 (1002)
Q Consensus 889 ~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H--p~f~~~~~~~ 965 (1002)
|+|++ |..||.+.+.......+...... +....++..+.+||.+||+.||.+|||+.+.++.+.++ ++|+.++|..
T Consensus 231 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~~~~~~~~~ 309 (322)
T 1p4o_A 231 WEIATLAEQPYQGLSNEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYY 309 (322)
T ss_dssp HHHHHTSCCTTTTSCHHHHHHHHHTTCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHHHCSTT
T ss_pred HHHHhcCCCccccCCHHHHHHHHHcCCcC-CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccCCccccccc
Confidence 99999 89999998888877777665432 33345788999999999999999999944433333332 8887776665
Q ss_pred hh
Q 001869 966 VR 967 (1002)
Q Consensus 966 ~~ 967 (1002)
..
T Consensus 310 ~~ 311 (322)
T 1p4o_A 310 SE 311 (322)
T ss_dssp ST
T ss_pred cc
Confidence 43
No 164
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=8.5e-40 Score=364.79 Aligned_cols=260 Identities=21% Similarity=0.317 Sum_probs=220.6
Q ss_pred cccccCCcccccccccCCcEEEEEEEE-----cCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEE
Q 001869 664 EQINLQHFRPIKPLGSGDTGSVHLVEL-----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYAS 737 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~ 737 (1002)
+.+..++|++.+.||+|+||.||+|.+ ..+++.||+|++.... .......+.+|+.+++++ +||||++++++
T Consensus 18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~ 95 (313)
T 1t46_A 18 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNLLGA 95 (313)
T ss_dssp GBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch--hHHHHHHHHHHHHHHhhcccCCCeeeEEEE
Confidence 456678999999999999999999996 4567899999997542 344567888999999999 99999999999
Q ss_pred EEeCCeEEEEEecCCCCcHHHHHhhCCC----------------CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCC
Q 001869 738 FQTKTHVCLITDYCPGGELFLLLDRQPT----------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 801 (1002)
Q Consensus 738 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~----------------~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~N 801 (1002)
+...+..|+||||+++++|.+++..... ..+++..++.++.||+.||.|||++||+||||||+|
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N 175 (313)
T 1t46_A 96 CTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN 175 (313)
T ss_dssp ECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred EecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccce
Confidence 9999999999999999999999986532 248999999999999999999999999999999999
Q ss_pred EEEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhH
Q 001869 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (1002)
Q Consensus 802 ILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDI 881 (1002)
||++.++.+||+|||++........ ........||+.|+|||++.+..++.++||
T Consensus 176 il~~~~~~~kl~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di 230 (313)
T 1t46_A 176 ILLTHGRITKICDFGLARDIKNDSN-------------------------YVVKGNARLPVKWMAPESIFNCVYTFESDV 230 (313)
T ss_dssp EEEETTTEEEECCCGGGSCTTSCTT-------------------------SEECSSSEECGGGCCHHHHHHCCCCHHHHH
T ss_pred EEEcCCCCEEEcccccccccccccc-------------------------ceeccCCCCcceeeChHHhcCCCCChHHHH
Confidence 9999999999999999865432110 111234567889999999998899999999
Q ss_pred HHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 882 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 882 wSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
|||||++|+|++ |..||.+......+...+......+....++..+.+||.+||+.||.+||| +.++++
T Consensus 231 ~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~ 300 (313)
T 1t46_A 231 WSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPT----FKQIVQ 300 (313)
T ss_dssp HHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcC----HHHHHH
Confidence 999999999998 999998877666666666655555555668899999999999999999999 666654
No 165
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.9e-39 Score=371.77 Aligned_cols=260 Identities=22% Similarity=0.318 Sum_probs=219.8
Q ss_pred cccccCCcccccccccCCcEEEEEEEEcCC-------CeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEE
Q 001869 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGS-------GQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALY 735 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~-------~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~ 735 (1002)
+.+..++|++.+.||+|+||.||+|.+..+ +..||+|++... ........+.+|+.+++.+ +||||++++
T Consensus 64 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~hpnIv~~~ 141 (382)
T 3tt0_A 64 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKMIGKHKNIINLL 141 (382)
T ss_dssp TBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT--CCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc--cCHHHHHHHHHHHHHHHHhcCCchhhhhe
Confidence 456678999999999999999999998543 368999999764 2455567889999999999 999999999
Q ss_pred EEEEeCCeEEEEEecCCCCcHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCC
Q 001869 736 ASFQTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 801 (1002)
Q Consensus 736 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~N 801 (1002)
+++...+.+|+||||+.+++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|
T Consensus 142 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N 221 (382)
T 3tt0_A 142 GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARN 221 (382)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred eeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcce
Confidence 99999999999999999999999998643 2459999999999999999999999999999999999
Q ss_pred EEEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhH
Q 001869 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (1002)
Q Consensus 802 ILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDI 881 (1002)
||++.++.+||+|||++........ ........||+.|+|||++.+..++.++||
T Consensus 222 Ill~~~~~~kL~DFG~a~~~~~~~~-------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di 276 (382)
T 3tt0_A 222 VLVTEDNVMKIADFGLARDIHHIDY-------------------------YKKTTNGRLPVKWMAPEALFDRIYTHQSDV 276 (382)
T ss_dssp EEECTTCCEEECSCSCCCCSSCCCT-------------------------TCCCTTCCCGGGGSCHHHHHSCCCCHHHHH
T ss_pred EEEcCCCcEEEcccCcccccccccc-------------------------cccccCCCCCcceeCHHHhcCCCCCchhHH
Confidence 9999999999999999965432110 011223467899999999999999999999
Q ss_pred HHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 882 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 882 wSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
|||||++|+|++ |..||.+.+..+....+.... .......++.++.+||.+||+.||.+||| +.+++++
T Consensus 277 wslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dP~~Rps----~~ell~~ 346 (382)
T 3tt0_A 277 WSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH-RMDKPSNCTNELYMMMRDCWHAVPSQRPT----FKQLVED 346 (382)
T ss_dssp HHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC-CCCCCSSCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCCCCccCCHHHHHHHHHHcCCChhhCcC----HHHHHHH
Confidence 999999999999 999999988877766665543 33344567899999999999999999999 5555553
No 166
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1e-39 Score=359.86 Aligned_cols=257 Identities=22% Similarity=0.315 Sum_probs=221.5
Q ss_pred ccccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 001869 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (1002)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (1002)
.+.+..++|++.+.||+|+||.||+|.+..++..||+|++... ......+.+|+.+++.++||||+++++++.+.+
T Consensus 7 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 82 (288)
T 3kfa_A 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 82 (288)
T ss_dssp TTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC----STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred cccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC----HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence 4456778999999999999999999999999999999998753 335577889999999999999999999999999
Q ss_pred eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccC
Q 001869 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
.+|+||||+.|++|.+++.......+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus 83 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 162 (288)
T 3kfa_A 83 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162 (288)
T ss_dssp SEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSC
T ss_pred CEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceecc
Confidence 99999999999999999988666779999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCC
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~ 901 (1002)
... ........||+.|+|||++.+..++.++|||||||++|+|++ |..||.+.
T Consensus 163 ~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~ 216 (288)
T 3kfa_A 163 GDT--------------------------YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216 (288)
T ss_dssp SSS--------------------------SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred CCc--------------------------cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 211 111223457889999999998899999999999999999999 99999988
Q ss_pred ChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 902 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 902 ~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
+.......+.. ....+....++..+.+||.+||+.||.+||| +.++++
T Consensus 217 ~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~~~~ 264 (288)
T 3kfa_A 217 DLSQVYELLEK-DYRMERPEGCPEKVYELMRACWQWNPSDRPS----FAEIHQ 264 (288)
T ss_dssp CGGGHHHHHHT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred CHHHHHHHHhc-cCCCCCCCCCCHHHHHHHHHHhCCChhhCcC----HHHHHH
Confidence 77666555544 3444445568899999999999999999999 555543
No 167
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=4.4e-40 Score=371.84 Aligned_cols=254 Identities=26% Similarity=0.410 Sum_probs=187.3
Q ss_pred ccCCccccc-ccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe----C
Q 001869 667 NLQHFRPIK-PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT----K 741 (1002)
Q Consensus 667 ~~~~y~i~~-~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~----~ 741 (1002)
..++|++++ .||+|+||.||+|.+..+++.||||++.... .........++.++||||+++++++.. .
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~ 98 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-------KARQEVDHHWQASGGPHIVCILDVYENMHHGK 98 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-------HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-------HHHHHHHHHHHhcCCCChHHHHHHHhhccCCC
Confidence 357899965 5999999999999999999999999986531 112223344677899999999999976 5
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEcc---CCcEEEEeccCC
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLS 818 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~---~g~vkL~DFG~a 818 (1002)
..+|+|||||+|++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++
T Consensus 99 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~ 178 (336)
T 3fhr_A 99 RCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178 (336)
T ss_dssp EEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred ceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccc
Confidence 56899999999999999998766567999999999999999999999999999999999999986 455999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCC
Q 001869 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
..... ......+||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus 179 ~~~~~-----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf 229 (336)
T 3fhr_A 179 KETTQ-----------------------------NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPF 229 (336)
T ss_dssp EEC---------------------------------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred eeccc-----------------------------cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence 54321 1122357899999999998888899999999999999999999999
Q ss_pred CCCChHHHH----HHHHhCC--CCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 899 RGKTRQKTF----ANILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 899 ~~~~~~~~~----~~i~~~~--~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
.+....... ..+.... .+.+....++..+++||.+||+.||.+||| +.++++||||+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell~hp~~~~ 293 (336)
T 3fhr_A 230 YSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLT----ITQFMNHPWINQ 293 (336)
T ss_dssp ---------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCC----HHHHHHSHHHHT
T ss_pred CCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcC----HHHHhcCccccc
Confidence 776544332 2222222 233344568999999999999999999999 999999999986
No 168
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=8.5e-40 Score=364.98 Aligned_cols=262 Identities=21% Similarity=0.303 Sum_probs=220.2
Q ss_pred cccccccCCcccccccccCCcEEEEEEEEc-----CCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEE
Q 001869 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYA 736 (1002)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~ 736 (1002)
+.+.+..++|++.+.||+|+||.||+|.+. .++..||+|++.... .......+.+|+.+++.++||||+++++
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~ 93 (314)
T 2ivs_A 16 PKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA--SPSELRDLLSEFNVLKQVNHPHVIKLYG 93 (314)
T ss_dssp TTTBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEE
T ss_pred cccccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCceeeEEE
Confidence 445667789999999999999999999983 456899999997542 4556678899999999999999999999
Q ss_pred EEEeCCeEEEEEecCCCCcHHHHHhhCCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHcCccc
Q 001869 737 SFQTKTHVCLITDYCPGGELFLLLDRQPT----------------------KVLKEDAVRFYAAEVVVALEYLHCQGIIY 794 (1002)
Q Consensus 737 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~----------------------~~l~~~~i~~i~~qil~aL~yLH~~gIiH 794 (1002)
++...+.+|+||||+.+++|.+++..... ..+++..++.++.||+.||.|||++||+|
T Consensus 94 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH 173 (314)
T 2ivs_A 94 ACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVH 173 (314)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 99999999999999999999999986432 34899999999999999999999999999
Q ss_pred CCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCC
Q 001869 795 RDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG 874 (1002)
Q Consensus 795 rDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~ 874 (1002)
|||||+|||++.++.+||+|||++........ ........||+.|+|||++.+..
T Consensus 174 ~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~ 228 (314)
T 2ivs_A 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDS-------------------------YVKRSQGRIPVKWMAIESLFDHI 228 (314)
T ss_dssp CCCSGGGEEEETTTEEEECCCTTCEECTTTSC-------------------------EECSSCCCSCGGGCCHHHHHHCE
T ss_pred cccchheEEEcCCCCEEEcccccccccccccc-------------------------ceeccCCCCcccccChhhhcCCC
Confidence 99999999999999999999999865432110 01122345789999999999888
Q ss_pred CCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001869 875 HTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 875 ~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
++.++|||||||++|+|++ |..||.+.........+.... ..+....++..+.+||.+||+.||.+||| +.+++
T Consensus 229 ~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~l~ 303 (314)
T 2ivs_A 229 YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGH-RMERPDNCSEEMYRLMLQCWKQEPDKRPV----FADIS 303 (314)
T ss_dssp ECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHH
T ss_pred cCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCC-cCCCCccCCHHHHHHHHHHccCChhhCcC----HHHHH
Confidence 9999999999999999999 999999888776665555443 33344567899999999999999999999 66665
Q ss_pred cC
Q 001869 954 KH 955 (1002)
Q Consensus 954 ~H 955 (1002)
+|
T Consensus 304 ~~ 305 (314)
T 2ivs_A 304 KD 305 (314)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 169
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.9e-39 Score=356.92 Aligned_cols=257 Identities=23% Similarity=0.333 Sum_probs=215.2
Q ss_pred cccccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001869 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
..+.+..++|++++.||+|+||.||++.+. ++..||+|++..... ....+.+|+.+++.++||||+++++++.+.
T Consensus 17 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 91 (283)
T 3gen_A 17 GSWEIDPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM----SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 91 (283)
T ss_dssp CTTBCCGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSB----CHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred CCccCCHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCC----CHHHHHHHHHHHhcCCCCCEeeEEEEEecC
Confidence 345677889999999999999999999885 677899999986432 235688899999999999999999999999
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
+.+|+||||+.+++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 92 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 170 (283)
T 3gen_A 92 RPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV 170 (283)
T ss_dssp SSEEEEECCCTTCBHHHHHHCG-GGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGB
T ss_pred CCeEEEEeccCCCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEccccccccc
Confidence 9999999999999999999753 245999999999999999999999999999999999999999999999999998653
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~ 900 (1002)
.... ........||+.|+|||++.+..++.++|||||||++|+|++ |..||..
T Consensus 171 ~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~ 224 (283)
T 3gen_A 171 LDDE--------------------------YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 224 (283)
T ss_dssp CCHH--------------------------HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred cccc--------------------------cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 2110 011123457889999999998889999999999999999998 9999999
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 901 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
.+.......+.... .......++..+.+||.+||+.||.+||| +.++++|
T Consensus 225 ~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~ll~~ 274 (283)
T 3gen_A 225 FTNSETAEHIAQGL-RLYRPHLASEKVYTIMYSCWHEKADERPT----FKILLSN 274 (283)
T ss_dssp SCHHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHTTCSSGGGSCC----HHHHHHH
T ss_pred cChhHHHHHHhccc-CCCCCCcCCHHHHHHHHHHccCChhHCcC----HHHHHHH
Confidence 88888777776653 33333456889999999999999999999 6666654
No 170
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.6e-39 Score=354.56 Aligned_cols=254 Identities=22% Similarity=0.307 Sum_probs=216.4
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
.+..++|++++.||+|+||.||+|.+. ++..||+|++..... ....+.+|+.+++.++||||+++++++...+..
T Consensus 4 ~l~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 78 (268)
T 3sxs_A 4 ELKREEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSM----SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPI 78 (268)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTB----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSE
T ss_pred EechhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCC----cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCce
Confidence 456789999999999999999999875 577899999976432 235688899999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
|+||||+++++|.+++... ...+++..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++......
T Consensus 79 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 157 (268)
T 3sxs_A 79 YIVTEYISNGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD 157 (268)
T ss_dssp EEEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred EEEEEccCCCcHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchh
Confidence 9999999999999999764 235999999999999999999999999999999999999999999999999998654321
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCCh
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 903 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~ 903 (1002)
.. .......||+.|+|||++.+..++.++|||||||++|+|++ |..||...+.
T Consensus 158 ~~--------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~ 211 (268)
T 3sxs_A 158 QY--------------------------VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN 211 (268)
T ss_dssp CE--------------------------EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred hh--------------------------hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccCh
Confidence 10 11123457788999999998889999999999999999998 9999999888
Q ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 904 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 904 ~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
......+...... ......+..+.+||.+||+.||.+||| +.++++|
T Consensus 212 ~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~ll~~ 258 (268)
T 3sxs_A 212 SEVVLKVSQGHRL-YRPHLASDTIYQIMYSCWHELPEKRPT----FQQLLSS 258 (268)
T ss_dssp HHHHHHHHTTCCC-CCCTTSCHHHHHHHHHTTCSSGGGSCC----HHHHHHH
T ss_pred HHHHHHHHcCCCC-CCCCcChHHHHHHHHHHcCCChhhCcC----HHHHHHH
Confidence 8877777665433 333446889999999999999999999 7777654
No 171
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2.5e-39 Score=360.90 Aligned_cols=261 Identities=20% Similarity=0.269 Sum_probs=212.7
Q ss_pred cccccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001869 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
..+.+..++|++.+.||+|+||.||+|.+.. .+|+|+++.. .........+.+|+.+++.++||||+++++++..
T Consensus 29 ~~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~---~~avk~~k~~-~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~- 103 (307)
T 3lb7_A 29 YYWEIEASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVV-DPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK- 103 (307)
T ss_dssp CCCBCCTTSCCEEEEEEECSSCEEEEEESSS---EEEEEECCCS-SCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-
T ss_pred ceEEecccceEEEeEecCCCCeEEEEEEECC---EEEEEEEecC-CCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-
Confidence 3456788999999999999999999998743 5889988753 2345566788999999999999999999997754
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
+.+++||||+.|++|.+++... ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++...
T Consensus 104 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~ 182 (307)
T 3lb7_A 104 DNLAIVTQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVK 182 (307)
T ss_dssp SSCEEEEECCSSCBHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEECTTSCEEECCCCSSCC-
T ss_pred CcEEEEEecCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEcCCCCEEEccCCCceec
Confidence 5689999999999999999754 356999999999999999999999999999999999999999999999999998643
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCccccccccc---CCCCCChhhHHHHHHHHHHHHcCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
.... .........||+.|+|||++. +..++.++|||||||++|+|++|..||
T Consensus 183 ~~~~-------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf 237 (307)
T 3lb7_A 183 SRWS-------------------------GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPY 237 (307)
T ss_dssp ------------------------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred cccc-------------------------ccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 2110 011123457999999999986 566788999999999999999999999
Q ss_pred CCCChHHHHHHHHhCCCCCCC----CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCC
Q 001869 899 RGKTRQKTFANILHKDLKFPS----STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 957 (1002)
Q Consensus 899 ~~~~~~~~~~~i~~~~~~~~~----~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~ 957 (1002)
.+.+..+.+..+.......+. ...++..+.+||.+||+.||.+||+ +.+++++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs----~~~il~~l~ 296 (307)
T 3lb7_A 238 SHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPL----FPQILSSIE 296 (307)
T ss_dssp TTCCCHHHHHHHHHHTCCCCCSTTSCSSSCHHHHHHHHHHSCSSSTTSCC----HHHHHHHHH
T ss_pred ccCCcHHHHHHHHhcCCCCcchhhhhcCCcHHHHHHHHHHhhCChhhCcC----HHHHHHHHH
Confidence 987776666555544333332 2457889999999999999999999 777777654
No 172
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-39 Score=367.71 Aligned_cols=258 Identities=20% Similarity=0.285 Sum_probs=217.9
Q ss_pred ccccCCcccccccccCCcEEEEEEEEc-----CCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 739 (1002)
.+..++|++++.||+|+||.||+|.+. .+++.||||+++... .......+.+|+.+++.++||||+++++++.
T Consensus 43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 120 (343)
T 1luf_A 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDNPNIVKLLGVCA 120 (343)
T ss_dssp BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 455689999999999999999999997 455899999997642 3445678899999999999999999999999
Q ss_pred eCCeEEEEEecCCCCcHHHHHhhCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCC
Q 001869 740 TKTHVCLITDYCPGGELFLLLDRQP----------------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL 797 (1002)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~~----------------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDL 797 (1002)
..+.+|+||||+++++|.+++.... ...+++..++.++.||+.||.|||++||+||||
T Consensus 121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dl 200 (343)
T 1luf_A 121 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDL 200 (343)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 9999999999999999999998642 156899999999999999999999999999999
Q ss_pred CCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCC
Q 001869 798 KPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTS 877 (1002)
Q Consensus 798 KP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~ 877 (1002)
||+|||++.++.+||+|||++....... .........||+.|+|||++.+..++.
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~-------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~ 255 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSAD-------------------------YYKADGNDAIPIRWMPPESIFYNRYTT 255 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGG-------------------------CBC----CCBCGGGCCHHHHHHCCCCH
T ss_pred CcceEEECCCCeEEEeecCCCcccccCc-------------------------cccccCCCcccceecChhhhccCCcCc
Confidence 9999999999999999999986532110 001123456899999999999888999
Q ss_pred hhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 878 AVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 878 ~sDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
++|||||||++|+|++ |..||.+.+..+....+...... +....++..+.+||.+||+.||.+||| +.++++
T Consensus 256 ~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~~~~ 328 (343)
T 1luf_A 256 ESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNIL-ACPENCPLELYNLMRLCWSKLPADRPS----FCSIHR 328 (343)
T ss_dssp HHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred ccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCCcC-CCCCCCCHHHHHHHHHHcccCcccCCC----HHHHHH
Confidence 9999999999999998 99999998888877777665542 233457889999999999999999999 555543
No 173
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=6.2e-40 Score=365.96 Aligned_cols=264 Identities=20% Similarity=0.276 Sum_probs=210.5
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
+..++|++.+.||+|+||.||+|.+..+++.||+|.+... .......+.+|+.+++.++||||+++++++.+.+..|
T Consensus 7 ~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 83 (310)
T 3s95_A 7 FRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF---DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLN 83 (310)
T ss_dssp ECGGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred eChhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeE
Confidence 4567999999999999999999999999999999988543 4566778899999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+||||+.+++|.+++... ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 84 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 162 (310)
T 3s95_A 84 FITEYIKGGTLRGIIKSM-DSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK 162 (310)
T ss_dssp EEEECCTTCBHHHHHHHC-CTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC---
T ss_pred EEEEecCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceeccccc
Confidence 999999999999999874 3459999999999999999999999999999999999999999999999999997654221
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
...... ..............+||+.|+|||++.+..++.++|||||||++|+|++|..||.......
T Consensus 163 ~~~~~~-------------~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~ 229 (310)
T 3s95_A 163 TQPEGL-------------RSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRT 229 (310)
T ss_dssp ------------------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBC
T ss_pred cccccc-------------ccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhH
Confidence 110000 0000001112235689999999999999999999999999999999999999986532210
Q ss_pred -----HHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 906 -----TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 906 -----~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
......... ....++..+.+||.+||+.||.+||| +.++++
T Consensus 230 ~~~~~~~~~~~~~~----~~~~~~~~l~~li~~~l~~dP~~Rps----~~~l~~ 275 (310)
T 3s95_A 230 MDFGLNVRGFLDRY----CPPNCPPSFFPITVRCCDLDPEKRPS----FVKLEH 275 (310)
T ss_dssp TTSSBCHHHHHHHT----CCTTCCTTHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred HHHhhhhhcccccc----CCCCCCHHHHHHHHHHccCChhhCcC----HHHHHH
Confidence 111111111 12346778999999999999999999 666654
No 174
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.6e-39 Score=361.01 Aligned_cols=250 Identities=23% Similarity=0.305 Sum_probs=203.7
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
...++|++++.||+|+||.||+|.+..+++.||+|++.............+.+|+.+++.++||||+++++++...+.+|
T Consensus 31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 2h34_A 31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLY 110 (309)
T ss_dssp ---CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred cEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEE
Confidence 34679999999999999999999999999999999998765555666788899999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+||||++|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 111 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 111 VDMRLINGVDLAAMLRRQ--GPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp EEEECCCCEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred EEEEecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence 999999999999999864 459999999999999999999999999999999999999999999999999985532110
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 905 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~ 905 (1002)
........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+...
T Consensus 189 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 242 (309)
T 2h34_A 189 --------------------------LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSV 242 (309)
T ss_dssp ----------------------------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHH
T ss_pred --------------------------cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHH
Confidence 011224569999999999999999999999999999999999999998876553
Q ss_pred HHHHHHhCCCCCC--CCCCCCHHHHHHHHHccccCcCCCCC
Q 001869 906 TFANILHKDLKFP--SSTPTSLHAKQLMYRLLHRDPKSRLG 944 (1002)
Q Consensus 906 ~~~~i~~~~~~~~--~~~~~s~~~~~Ll~~~L~~dP~~Rpt 944 (1002)
+...+......+ ....++..+.+||.+||+.||.+||+
T Consensus 243 -~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~ 282 (309)
T 2h34_A 243 -MGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYV 282 (309)
T ss_dssp -HHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCS
T ss_pred -HHHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHH
Confidence 334444333222 23457888999999999999999994
No 175
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.5e-39 Score=360.11 Aligned_cols=256 Identities=20% Similarity=0.347 Sum_probs=207.1
Q ss_pred cccccCCcccccccccCCcEEEEEEE----EcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 001869 664 EQINLQHFRPIKPLGSGDTGSVHLVE----LCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 739 (1002)
..+..++|++++.||+|+||.||+|. +..+++.||||++... .......+.+|+.+++.++||||+++++++.
T Consensus 5 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 81 (295)
T 3ugc_A 5 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQHDNIVKYKGVCY 81 (295)
T ss_dssp -CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred CcCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence 35667899999999999999999998 5678999999998754 4455678889999999999999999999986
Q ss_pred e--CCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccC
Q 001869 740 T--KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (1002)
Q Consensus 740 ~--~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~ 817 (1002)
. ...+|+||||+++++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus 82 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 160 (295)
T 3ugc_A 82 SAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGL 160 (295)
T ss_dssp HHHHTSCEEEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCS
T ss_pred cCCCCceEEEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcc
Confidence 4 456899999999999999997653 3589999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCC
Q 001869 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~P 897 (1002)
+......... ........|++.|+|||++.+..++.++|||||||++|+|++|..|
T Consensus 161 ~~~~~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~ 216 (295)
T 3ugc_A 161 TKVLPQDKEF------------------------FKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEK 216 (295)
T ss_dssp CC-------------------------------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCT
T ss_pred cccccCCcce------------------------eeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccc
Confidence 9654321110 0112234578889999999999999999999999999999999999
Q ss_pred CCCCChH---------------HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001869 898 FRGKTRQ---------------KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 898 f~~~~~~---------------~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
|...... ......+......+....++..+.+||.+||+.||.+|||+.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e 281 (295)
T 3ugc_A 217 SKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 281 (295)
T ss_dssp TCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred cCCChHHHHhhhcCccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHH
Confidence 8643211 0122223334455555678999999999999999999999433
No 176
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=7e-40 Score=376.27 Aligned_cols=256 Identities=20% Similarity=0.286 Sum_probs=216.2
Q ss_pred ccccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 001869 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (1002)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (1002)
.+.+..++|++.+.||+|+||.||+|.+..+++.||||+++... .......+.+|+.+++.++||||+++++++...+
T Consensus 108 ~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 185 (377)
T 3cbl_A 108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ 185 (377)
T ss_dssp TTBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS--CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred ccEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCC
Confidence 34577789999999999999999999999899999999987542 3445567889999999999999999999999999
Q ss_pred eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccC
Q 001869 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
.+|+|||||++|+|.+++... ...++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++....
T Consensus 186 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~ 264 (377)
T 3cbl_A 186 PIYIVMELVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEA 264 (377)
T ss_dssp SCEEEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECT
T ss_pred CcEEEEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecC
Confidence 999999999999999999764 2358999999999999999999999999999999999999999999999999986432
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCC
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~ 901 (1002)
.... ........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.
T Consensus 265 ~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~ 319 (377)
T 3cbl_A 265 DGVY-------------------------AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNL 319 (377)
T ss_dssp TSEE-------------------------ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTS
T ss_pred CCce-------------------------eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 1100 001112346778999999998889999999999999999998 99999998
Q ss_pred ChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001869 902 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 902 ~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
+..+....+..+ ...+....++..+.+||.+||+.||.+|||+.+
T Consensus 320 ~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~ 364 (377)
T 3cbl_A 320 SNQQTREFVEKG-GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFST 364 (377)
T ss_dssp CHHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHH
Confidence 877766555443 344445567889999999999999999999443
No 177
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=4.8e-39 Score=358.65 Aligned_cols=257 Identities=28% Similarity=0.411 Sum_probs=207.0
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (1002)
..++|++.+.||+|+||.||+|.+..+++.||||++.............+.+|+.+++.++||||+++++++...+..++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 45689999999999999999999999999999999986555566677888999999999999999999999999999999
Q ss_pred EEecCCCCcHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 747 ITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
||||+.+++|.+++.. .....+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~ 189 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 189 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC---------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCC
Confidence 9999999999999874 22456899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC--
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT-- 902 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~-- 902 (1002)
........|++.|+|||++.+..++.++|||||||++|+|++|..||.+..
T Consensus 190 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~ 242 (310)
T 2wqm_A 190 ---------------------------TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN 242 (310)
T ss_dssp ------------------------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC
T ss_pred ---------------------------CccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh
Confidence 011223578999999999999999999999999999999999999997643
Q ss_pred hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 903 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
.......+.....+......++.++.+||.+||..||.+||| +.++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~il~ 290 (310)
T 2wqm_A 243 LYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPD----VTYVYD 290 (310)
T ss_dssp HHHHHHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred HHHHHHHhhcccCCCCcccccCHHHHHHHHHHcCCChhhCCC----HHHHHH
Confidence 334444555544433333567889999999999999999999 666654
No 178
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=5.8e-40 Score=368.99 Aligned_cols=257 Identities=21% Similarity=0.301 Sum_probs=207.5
Q ss_pred cccccCCcccccccccCCcEEEEEEEEcCCCeE----EEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 001869 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQY----FAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~----vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 739 (1002)
..+..++|++++.||+|+||.||+|.+..++.. +|+|.+.... .......+.+|+.+++.++||||+++++++.
T Consensus 8 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 85 (325)
T 3kex_A 8 RIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS--GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP 85 (325)
T ss_dssp CBCCTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT--SCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC
T ss_pred hhcCHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc--cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc
Confidence 345678999999999999999999999888775 6667664332 1222345667999999999999999999886
Q ss_pred eCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCc
Q 001869 740 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (1002)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~ 819 (1002)
.+..++||||+.+++|.+++... ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.
T Consensus 86 -~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 163 (325)
T 3kex_A 86 -GSSLQLVTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVAD 163 (325)
T ss_dssp -BSSEEEEEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGG
T ss_pred -CCccEEEEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCccc
Confidence 46689999999999999999764 3458999999999999999999999999999999999999999999999999997
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCC
Q 001869 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPF 898 (1002)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf 898 (1002)
....... ........||+.|+|||++.+..++.++|||||||++|+|++ |..||
T Consensus 164 ~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~ 218 (325)
T 3kex_A 164 LLPPDDK-------------------------QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPY 218 (325)
T ss_dssp GSCCCTT-------------------------CCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred ccCcccc-------------------------cccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCc
Confidence 6432211 011234568889999999998899999999999999999999 99999
Q ss_pred CCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHH
Q 001869 899 RGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 950 (1002)
Q Consensus 899 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~ 950 (1002)
.+....+....+.... ..+....++..+.+||.+||+.||.+|||+.+.++
T Consensus 219 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~ 269 (325)
T 3kex_A 219 AGLRLAEVPDLLEKGE-RLAQPQICTIDVYMVMVKCWMIDENIRPTFKELAN 269 (325)
T ss_dssp TTSCTTHHHHHHHTTC-BCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHH
T ss_pred cccCHHHHHHHHHcCC-CCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9887766666555443 33333446778999999999999999999544433
No 179
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=5.3e-39 Score=354.06 Aligned_cols=253 Identities=23% Similarity=0.344 Sum_probs=210.2
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHH----HHHHHHHHHHHhCCCCCcceEEEEEEe
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKV----HRACAEREILDMLDHPFVPALYASFQT 740 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (1002)
.+..++|++.+.||+|+||.||+|.+..+++.||+|++........... ..+.+|+.+++.++||||+++++++.+
T Consensus 15 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 94 (287)
T 4f0f_A 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN 94 (287)
T ss_dssp BCCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETT
T ss_pred hhhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecC
Confidence 3566899999999999999999999999999999999876533322222 678899999999999999999999876
Q ss_pred CCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC--cccCCCCCCCEEEccCCc-----EEEE
Q 001869 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGH-----VSLT 813 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~g--IiHrDLKP~NILl~~~g~-----vkL~ 813 (1002)
.. ++||||+++++|.+++... ...+++..++.++.||+.||+|||++| |+||||||+|||++.++. +||+
T Consensus 95 ~~--~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~ 171 (287)
T 4f0f_A 95 PP--RMVMEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVA 171 (287)
T ss_dssp TT--EEEEECCTTCBHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEEC
T ss_pred CC--eEEEEecCCCCHHHHHhcc-cCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeC
Confidence 65 7999999999999988654 346999999999999999999999999 999999999999988776 9999
Q ss_pred eccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccc--cCCCCCChhhHHHHHHHHHHH
Q 001869 814 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII--AGAGHTSAVDWWALGILLYEM 891 (1002)
Q Consensus 814 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l--~~~~~~~~sDIwSlGvil~el 891 (1002)
|||++..... ......||+.|+|||++ ....++.++|||||||++|+|
T Consensus 172 Dfg~~~~~~~------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l 221 (287)
T 4f0f_A 172 DFGLSQQSVH------------------------------SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTI 221 (287)
T ss_dssp CCTTCBCCSS------------------------------CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHH
T ss_pred CCCccccccc------------------------------cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHH
Confidence 9999853221 12235799999999998 345577899999999999999
Q ss_pred HcCCCCCCCCChH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 892 LYGYTPFRGKTRQ--KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 892 ltG~~Pf~~~~~~--~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
++|..||.+.... .....+............++..+.+||.+||+.||.+||| +.++++
T Consensus 222 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~ 282 (287)
T 4f0f_A 222 LTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPH----FSYIVK 282 (287)
T ss_dssp HHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred HcCCCCCccccccHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcC----HHHHHH
Confidence 9999999775433 3344555555555555668899999999999999999999 555553
No 180
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=4.1e-39 Score=359.89 Aligned_cols=263 Identities=24% Similarity=0.365 Sum_probs=214.6
Q ss_pred cccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC--CCCcceEEEEEEeC
Q 001869 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD--HPFVPALYASFQTK 741 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~--hpnIv~l~~~~~~~ 741 (1002)
..+..++|++++.||+|+||.||+|.+. +++.||+|++.... ........+.+|+.+++.+. ||||+++++++...
T Consensus 23 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~ 100 (313)
T 3cek_A 23 MSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD 100 (313)
T ss_dssp EEETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSS-CCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECS
T ss_pred eeeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEecccc-ccccchHHHHHHHHHHHhccccCCceEEEEEEeecC
Confidence 3456678999999999999999999985 58899999997643 24556678899999999996 59999999999999
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
+.+|+|||+ .+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||++...
T Consensus 101 ~~~~lv~e~-~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~ 176 (313)
T 3cek_A 101 QYIYMVMEC-GNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQM 176 (313)
T ss_dssp SEEEEEECC-CSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCC-
T ss_pred CEEEEEEec-CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeEEEeeccccccc
Confidence 999999995 589999999875 4589999999999999999999999999999999999996 589999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-----------CCCCChhhHHHHHHHHHH
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----------AGHTSAVDWWALGILLYE 890 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----------~~~~~~sDIwSlGvil~e 890 (1002)
..... ........||+.|+|||++.+ ..++.++|||||||++|+
T Consensus 177 ~~~~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~e 231 (313)
T 3cek_A 177 QPDTT-------------------------SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY 231 (313)
T ss_dssp --------------------------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHH
T ss_pred cCccc-------------------------cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHH
Confidence 31110 011224579999999999876 467789999999999999
Q ss_pred HHcCCCCCCCCC-hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 891 MLYGYTPFRGKT-RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 891 lltG~~Pf~~~~-~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
|++|..||.... ....+..+.............+..+.+||.+||+.||.+||+ +.++++||||+..
T Consensus 232 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~h~~~~~~ 299 (313)
T 3cek_A 232 MTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRIS----IPELLAHPYVQIQ 299 (313)
T ss_dssp HHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCC----HHHHHTSHHHHCC
T ss_pred HHhCCCchhhHHHHHHHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcC----HHHHhcCccccCC
Confidence 999999998754 334455555544444444456889999999999999999999 9999999999863
No 181
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=3.6e-39 Score=354.52 Aligned_cols=256 Identities=25% Similarity=0.359 Sum_probs=206.1
Q ss_pred cccccCCcccccccccCCcEEEEEEEEcCC---CeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 001869 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (1002)
..+..++|++.+.||+|+||.||+|.+..+ +..+|+|.+... ........+.+|+.+++.++||||+++++++.
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~- 86 (281)
T 1mp8_A 10 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC--TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT- 86 (281)
T ss_dssp CBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT--TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-
T ss_pred eEEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-
Confidence 346678999999999999999999998653 567999988753 23455677889999999999999999999984
Q ss_pred CCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcc
Q 001869 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
.+..|+||||+.+++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (281)
T 1mp8_A 87 ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 165 (281)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC------
T ss_pred cCccEEEEecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccc
Confidence 46789999999999999999764 34599999999999999999999999999999999999999999999999999865
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCC
Q 001869 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFR 899 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~ 899 (1002)
...... .......+|+.|+|||++.+..++.++|||||||++|+|++ |..||.
T Consensus 166 ~~~~~~--------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~ 219 (281)
T 1mp8_A 166 MEDSTY--------------------------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 219 (281)
T ss_dssp ---------------------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred cCcccc--------------------------cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCC
Confidence 431100 01123357889999999998889999999999999999996 999999
Q ss_pred CCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 900 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 900 ~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
+....+.+..+.... ..+....++..+.+||.+||+.||.+||| +.++++
T Consensus 220 ~~~~~~~~~~i~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~l~~ 269 (281)
T 1mp8_A 220 GVKNNDVIGRIENGE-RLPMPPNCPPTLYSLMTKCWAYDPSRRPR----FTELKA 269 (281)
T ss_dssp TCCGGGHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred cCCHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHccCChhhCcC----HHHHHH
Confidence 888777777666543 23344567899999999999999999999 555554
No 182
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.6e-39 Score=366.32 Aligned_cols=260 Identities=22% Similarity=0.329 Sum_probs=220.0
Q ss_pred cccccCCcccccccccCCcEEEEEEEEcCCCe-----EEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEE
Q 001869 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQ-----YFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYAS 737 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~ 737 (1002)
..+..++|++.+.||+|+||.||+|.+..+++ .||+|.+.... .......+.+|+.+++.+ +||||++++++
T Consensus 41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 118 (333)
T 2i1m_A 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA--HADEKEALMSELKIMSHLGQHENIVNLLGA 118 (333)
T ss_dssp GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc--ChHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence 34667899999999999999999999977654 89999987542 344567788999999999 89999999999
Q ss_pred EEeCCeEEEEEecCCCCcHHHHHhhCC------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEc
Q 001869 738 FQTKTHVCLITDYCPGGELFLLLDRQP------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ 805 (1002)
Q Consensus 738 ~~~~~~~~lV~E~~~ggsL~~~l~~~~------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~ 805 (1002)
+...+.+|+||||+++++|.+++.... ...++...++.++.||+.||.|||++||+||||||+|||++
T Consensus 119 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~ 198 (333)
T 2i1m_A 119 CTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT 198 (333)
T ss_dssp ECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEE
T ss_pred EecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEEC
Confidence 999999999999999999999997531 34589999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHH
Q 001869 806 GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALG 885 (1002)
Q Consensus 806 ~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlG 885 (1002)
.++.+||+|||++........ ........||+.|+|||++.+..++.++||||||
T Consensus 199 ~~~~~kl~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 253 (333)
T 2i1m_A 199 NGHVAKIGDFGLARDIMNDSN-------------------------YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 253 (333)
T ss_dssp GGGEEEBCCCGGGCCGGGCTT-------------------------SEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHH
T ss_pred CCCeEEECccccccccccccc-------------------------eeecCCCCCCccccCHHHhccCCCChHHHHHHHH
Confidence 999999999999865321110 1112345678899999999988899999999999
Q ss_pred HHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 886 ILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 886 vil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
|++|+|++ |..||.+......+..+.......+....++..+.+||.+||+.||.+||| +.++++
T Consensus 254 ~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~l~~ 319 (333)
T 2i1m_A 254 ILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPT----FQQICS 319 (333)
T ss_dssp HHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred HHHHHHHcCCCCCCcccchhHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcC----HHHHHH
Confidence 99999998 999998877666666666665555555667899999999999999999999 666654
No 183
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2.2e-39 Score=357.41 Aligned_cols=250 Identities=17% Similarity=0.235 Sum_probs=206.8
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCC-------eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSG-------QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYAS 737 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~-------~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~ 737 (1002)
.+..++|++.+.||+|+||.||+|.+..++ ..||+|++... .......+.+|+.+++.++||||++++++
T Consensus 4 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 80 (289)
T 4fvq_A 4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA---HRNYSESFFEAASMMSKLSHKHLVLNYGV 80 (289)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG---GGGGHHHHHHHHHHHHTSCCTTBCCEEEE
T ss_pred EechhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc---cHHHHHHHHHHHHHHHhCCCCCEeEEEEE
Confidence 356679999999999999999999998776 57999998654 23455678899999999999999999999
Q ss_pred EEeCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCc--------
Q 001869 738 FQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH-------- 809 (1002)
Q Consensus 738 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~-------- 809 (1002)
+...+..|+||||+.+++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.
T Consensus 81 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~ 159 (289)
T 4fvq_A 81 CVCGDENILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPF 159 (289)
T ss_dssp ECCTTCCEEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred EEeCCCCEEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccce
Confidence 999999999999999999999998642 34899999999999999999999999999999999999998887
Q ss_pred EEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-CCCCChhhHHHHHHHH
Q 001869 810 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILL 888 (1002)
Q Consensus 810 vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~~~~sDIwSlGvil 888 (1002)
+||+|||++.... ......||+.|+|||++.+ ..++.++|||||||++
T Consensus 160 ~kl~Dfg~~~~~~-------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il 208 (289)
T 4fvq_A 160 IKLSDPGISITVL-------------------------------PKDILQERIPWVPPECIENPKNLNLATDKWSFGTTL 208 (289)
T ss_dssp EEECCCCSCTTTS-------------------------------CHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHH
T ss_pred eeeccCccccccc-------------------------------CccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHH
Confidence 9999999985421 1123458899999999987 6788899999999999
Q ss_pred HHHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 889 YEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 889 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
|+|++|..|+..................++. ..+.++.+||.+||+.||.+||| +.++++|
T Consensus 209 ~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~li~~~l~~dp~~Rps----~~~ll~~ 269 (289)
T 4fvq_A 209 WEICSGGDKPLSALDSQRKLQFYEDRHQLPA--PKAAELANLINNCMDYEPDHRPS----FRAIIRD 269 (289)
T ss_dssp HHHHTTTCCTTTTSCHHHHHHHHHTTCCCCC--CSSCTTHHHHHHHSCSSGGGSCC----HHHHHHH
T ss_pred HHHHcCCCCCccccchHHHHHHhhccCCCCC--CCCHHHHHHHHHHcCCChhHCcC----HHHHHHH
Confidence 9999955444444333334444444444443 34667899999999999999999 6666553
No 184
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.3e-39 Score=365.30 Aligned_cols=256 Identities=27% Similarity=0.361 Sum_probs=215.7
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccCh---hHHHHHHHHHHHHHhCC--CCCcceEEEEEEe
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR---NKVHRACAEREILDMLD--HPFVPALYASFQT 740 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~---~~~~~~~~E~~il~~l~--hpnIv~l~~~~~~ 740 (1002)
...++|++.+.||+|+||.||+|.+..+++.||||++........ .....+.+|+.+++.+. ||||+++++++..
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 346789999999999999999999999999999999986543221 12234567999999996 5999999999999
Q ss_pred CCeEEEEEecCCC-CcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEc-cCCcEEEEeccCC
Q 001869 741 KTHVCLITDYCPG-GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-GNGHVSLTDFDLS 818 (1002)
Q Consensus 741 ~~~~~lV~E~~~g-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~-~~g~vkL~DFG~a 818 (1002)
.+..++||||+.+ ++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 120 ~~~~~lv~e~~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~ 197 (320)
T 3a99_A 120 PDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 197 (320)
T ss_dssp SSEEEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred CCcEEEEEEcCCCCccHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCccc
Confidence 9999999999976 8999999864 4599999999999999999999999999999999999999 7899999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCC-CChhhHHHHHHHHHHHHcCCCC
Q 001869 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-~~~sDIwSlGvil~elltG~~P 897 (1002)
...... ......||+.|+|||++.+..+ +.++|||||||++|+|++|..|
T Consensus 198 ~~~~~~-----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~p 248 (320)
T 3a99_A 198 ALLKDT-----------------------------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 248 (320)
T ss_dssp EECCSS-----------------------------CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCS
T ss_pred cccccc-----------------------------cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCC
Confidence 654211 1123569999999999977665 6789999999999999999999
Q ss_pred CCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChh
Q 001869 898 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 964 (1002)
Q Consensus 898 f~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~ 964 (1002)
|.... .+......++ ..++..+.+||.+||+.||.+||| +.++++||||+.+...
T Consensus 249 f~~~~------~~~~~~~~~~--~~~~~~~~~li~~~l~~dp~~Rps----~~~ll~hp~~~~~~~~ 303 (320)
T 3a99_A 249 FEHDE------EIIRGQVFFR--QRVSSECQHLIRWCLALRPSDRPT----FEEIQNHPWMQDVLLP 303 (320)
T ss_dssp CCSHH------HHHHCCCCCS--SCCCHHHHHHHHHHTCSSGGGSCC----HHHHHTSGGGSSCCCH
T ss_pred CCChh------hhhccccccc--ccCCHHHHHHHHHHccCChhhCcC----HHHHhcCHhhcCccCc
Confidence 97632 2334443333 347889999999999999999999 9999999999987654
No 185
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=2.7e-39 Score=363.99 Aligned_cols=257 Identities=23% Similarity=0.314 Sum_probs=206.3
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEE----EEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYF----AMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~v----aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (1002)
.+..++|++++.||+|+||.||+|.+..+++.+ |+|.+.... .......+.+|+.+++.++||||+++++++..
T Consensus 11 ~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 88 (327)
T 3poz_A 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLT 88 (327)
T ss_dssp ECCGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC---------CHHHHHHHHHHHHHCCBTTBCCEEEEEES
T ss_pred hcCHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec
Confidence 355678999999999999999999998777654 677665332 23345678899999999999999999999987
Q ss_pred CCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcc
Q 001869 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
.+ .++|+||+.+|+|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus 89 ~~-~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 89 ST-VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp SS-EEEEEECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred CC-eEEEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeE
Confidence 65 789999999999999998753 4599999999999999999999999999999999999999999999999999965
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCC
Q 001869 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFR 899 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~ 899 (1002)
....... .......||+.|+|||++.+..++.++|||||||++|+|++ |..||.
T Consensus 167 ~~~~~~~-------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~ 221 (327)
T 3poz_A 167 LGAEEKE-------------------------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221 (327)
T ss_dssp HTTTCC--------------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred ccCCccc-------------------------ccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCcc
Confidence 4322110 11123457889999999999999999999999999999999 999998
Q ss_pred CCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 900 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 900 ~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
+.........+. .....+....++..+.+|+.+||+.||.+||+ +.++++|
T Consensus 222 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~ell~~ 272 (327)
T 3poz_A 222 GIPASEISSILE-KGERLPQPPICTIDVYMIMVKCWMIDADSRPK----FRELIIE 272 (327)
T ss_dssp TCCGGGHHHHHH-TTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCC----HHHHHHH
T ss_pred CCCHHHHHHHHH-cCCCCCCCccCCHHHHHHHHHHcCCChhhCCC----HHHHHHH
Confidence 877766554444 44445555668899999999999999999999 5555543
No 186
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=7.7e-39 Score=354.45 Aligned_cols=256 Identities=20% Similarity=0.244 Sum_probs=210.3
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCe
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 743 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 743 (1002)
.+..++|++++.||+|+||.||+|.+..+++.||||++.... ....+.+|+.+++.+ +|+|++.+++++.....
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~ 80 (298)
T 1csn_A 6 NVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-----DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLH 80 (298)
T ss_dssp CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-----TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTE
T ss_pred cccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-----ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCce
Confidence 355678999999999999999999999999999999987542 223567799999999 79999999999999999
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCc-----EEEEeccCC
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH-----VSLTDFDLS 818 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~-----vkL~DFG~a 818 (1002)
.|+||||+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++. +||+|||++
T Consensus 81 ~~lv~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~ 158 (298)
T 1csn_A 81 NVLVIDLL-GPSLEDLLDLC-GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV 158 (298)
T ss_dssp EEEEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTC
T ss_pred eEEEEEec-CCCHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccc
Confidence 99999999 99999999865 345999999999999999999999999999999999999987765 999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCC
Q 001869 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
......... ...+........||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus 159 ~~~~~~~~~--------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf 218 (298)
T 1csn_A 159 KFYRDPVTK--------------------QHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPW 218 (298)
T ss_dssp EESBCTTTC--------------------CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred ccccccccc--------------------ccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCc
Confidence 764322110 001112334568999999999999999999999999999999999999999
Q ss_pred CCC---ChHHHHHHHHhCCCCCC---CCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001869 899 RGK---TRQKTFANILHKDLKFP---SSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 899 ~~~---~~~~~~~~i~~~~~~~~---~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
.+. .....+..+.......+ ....++..+.+||.+||+.||.+||++.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~ 273 (298)
T 1csn_A 219 QGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDY 273 (298)
T ss_dssp SSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHH
T ss_pred chhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHH
Confidence 874 34444444433221111 12347889999999999999999999654
No 187
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=7.3e-39 Score=376.43 Aligned_cols=251 Identities=22% Similarity=0.363 Sum_probs=215.1
Q ss_pred hccccccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 001869 660 LDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (1002)
Q Consensus 660 ~~~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 739 (1002)
...++.+..++|++++.||+|+||.||++.+ .++.||||+++... ....+.+|+.+|++++||||+++++++.
T Consensus 184 ~~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~--~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~ 256 (450)
T 1k9a_A 184 YRSGWALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIV 256 (450)
T ss_dssp HHTTCBCCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEESSCT-----TSHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred cccccccChHHeEEEeeecCcCCeeEEEEEe--cCCeEEEEEeCCch-----HHHHHHHHHHHHHhccCCCEEEEEEEEE
Confidence 3567788899999999999999999999998 47799999997542 3467889999999999999999999987
Q ss_pred eCC-eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCC
Q 001869 740 TKT-HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (1002)
Q Consensus 740 ~~~-~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a 818 (1002)
... .+|+|||||++|+|.+++.......++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus 257 ~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a 336 (450)
T 1k9a_A 257 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 336 (450)
T ss_dssp CTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred cCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCc
Confidence 654 7999999999999999998765556899999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCC
Q 001869 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTP 897 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~P 897 (1002)
+..... .....+++.|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus 337 ~~~~~~------------------------------~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P 386 (450)
T 1k9a_A 337 KEASST------------------------------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 386 (450)
T ss_dssp EECC------------------------------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCS
T ss_pred cccccc------------------------------ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 542210 112357889999999999999999999999999999998 9999
Q ss_pred CCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhc
Q 001869 898 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 898 f~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
|.+.+..+....+..+ ...+....++..+.+||.+||+.||.+|||+.+.
T Consensus 387 ~~~~~~~~~~~~i~~~-~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l 436 (450)
T 1k9a_A 387 YPRIPLKDVVPRVEKG-YKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQL 436 (450)
T ss_dssp STTSCTTTHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCCCHHHHHHHHHcC-CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 9988777766666544 3444455688999999999999999999995443
No 188
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=6.5e-39 Score=349.11 Aligned_cols=254 Identities=22% Similarity=0.362 Sum_probs=216.1
Q ss_pred cccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 001869 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 743 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 743 (1002)
+.+..++|++.+.||+|+||.||+|.+. ++..||+|++..... ....+.+|+.+++.++||||+++++++...+.
T Consensus 3 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 77 (267)
T 3t9t_A 3 WVIDPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP 77 (267)
T ss_dssp CBCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred eEEchhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC----CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 3456789999999999999999999985 678899999986532 23568889999999999999999999999999
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCC
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
.|+||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++.....
T Consensus 78 ~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 156 (267)
T 3t9t_A 78 ICLVTEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 156 (267)
T ss_dssp CEEEECCCTTCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred eEEEEeCCCCCcHHHHHhhC-cccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccccccccccc
Confidence 99999999999999999765 34589999999999999999999999999999999999999999999999999865321
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCC
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 902 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~ 902 (1002)
. .........|++.|+|||++.+..++.++|||||||++|+|++ |..||.+.+
T Consensus 157 ~--------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~ 210 (267)
T 3t9t_A 157 D--------------------------QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 210 (267)
T ss_dssp H--------------------------HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred c--------------------------cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCC
Confidence 0 0011123457889999999998889999999999999999999 999999988
Q ss_pred hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 903 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
.......+.... .......++..+.+||.+||+.||.+||| +.++++
T Consensus 211 ~~~~~~~i~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~ll~ 257 (267)
T 3t9t_A 211 NSEVVEDISTGF-RLYKPRLASTHVYQIMNHCWRERPEDRPA----FSRLLR 257 (267)
T ss_dssp HHHHHHHHHTTC-CCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred HHHHHHHHhcCC-cCCCCccCcHHHHHHHHHHccCChhhCcC----HHHHHH
Confidence 888777776553 22333457889999999999999999999 666654
No 189
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.8e-39 Score=365.21 Aligned_cols=265 Identities=18% Similarity=0.235 Sum_probs=218.0
Q ss_pred cccccCCcccccccccCCcEEEEEEE-----EcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEE
Q 001869 664 EQINLQHFRPIKPLGSGDTGSVHLVE-----LCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASF 738 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~-----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~ 738 (1002)
..+..++|++++.||+|+||.||+|. +..+++.||||.+... ........+.+|+.+++.++||||+++++++
T Consensus 25 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 102 (327)
T 2yfx_A 25 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFNHQNIVRCIGVS 102 (327)
T ss_dssp CBCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSS--CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred ccCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc--cchhhHHHHHHHHHHHhhCCCCCCCeEEEEE
Confidence 34667899999999999999999999 5567889999998643 2344566788999999999999999999999
Q ss_pred EeCCeEEEEEecCCCCcHHHHHhhCCC-----CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEcc---CCcE
Q 001869 739 QTKTHVCLITDYCPGGELFLLLDRQPT-----KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHV 810 (1002)
Q Consensus 739 ~~~~~~~lV~E~~~ggsL~~~l~~~~~-----~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~---~g~v 810 (1002)
...+..|+||||+++++|.+++..... ..++...++.++.||+.||.|||++||+||||||+|||++. ++.+
T Consensus 103 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~ 182 (327)
T 2yfx_A 103 LQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 182 (327)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCE
T ss_pred cCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceE
Confidence 999999999999999999999986432 34899999999999999999999999999999999999994 4469
Q ss_pred EEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHH
Q 001869 811 SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYE 890 (1002)
Q Consensus 811 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~e 890 (1002)
||+|||++....... .........||+.|+|||++.+..++.++|||||||++|+
T Consensus 183 kl~Dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e 237 (327)
T 2yfx_A 183 KIGDFGMARDIYRAS-------------------------YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 237 (327)
T ss_dssp EECCCHHHHHHHC-------------------------------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred EECcccccccccccc-------------------------ccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHH
Confidence 999999985432110 0111234568999999999988889999999999999999
Q ss_pred HHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCC
Q 001869 891 MLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 960 (1002)
Q Consensus 891 llt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 960 (1002)
|++ |..||.+.........+..... ......++..+.+||.+||+.||.+||+ +.++++|.|+-.
T Consensus 238 llt~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~~l~~~~ 303 (327)
T 2yfx_A 238 IFSLGYMPYPSKSNQEVLEFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPEDRPN----FAIILERIEYCT 303 (327)
T ss_dssp HHTTSCCSSTTCCHHHHHHHHHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHHHHHHH
T ss_pred HHcCCCCCCCCcCHHHHHHHHhcCCC-CCCCCCCCHHHHHHHHHHhcCChhhCcC----HHHHHHHHHHHh
Confidence 998 9999999888777776665543 2333457889999999999999999999 999999988654
No 190
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=5e-39 Score=359.39 Aligned_cols=262 Identities=26% Similarity=0.406 Sum_probs=203.3
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 744 (1002)
....++|++++.||+|+||.||+|.+..+++.||||++..... .......+..+..+++.++||||+++++++...+.+
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~ 99 (318)
T 2dyl_A 21 QAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGN-KEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDV 99 (318)
T ss_dssp ECCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSC-HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred hhhhccccccceeeecCCeeEEEEEEecCCeEEEEEEeccccc-chHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcE
Confidence 4566899999999999999999999999999999999976532 222233344455678888999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-CcccCCCCCCCEEEccCCcEEEEeccCCcccCC
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~-gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
|+||||+ ++.+..+.... ...+++..++.++.||+.||.|||++ ||+|+||||+|||++.++.+||+|||++.....
T Consensus 100 ~lv~e~~-~~~~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 177 (318)
T 2dyl_A 100 FIAMELM-GTCAEKLKKRM-QGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVD 177 (318)
T ss_dssp EEEECCC-SEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred EEEEecc-CCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence 9999999 66666665543 35699999999999999999999995 999999999999999999999999999854321
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCccccccccc-----CCCCCChhhHHHHHHHHHHHHcCCCCC
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
. .......||+.|+|||++. ...++.++|||||||++|+|++|..||
T Consensus 178 ~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf 229 (318)
T 2dyl_A 178 D----------------------------KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPY 229 (318)
T ss_dssp -------------------------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred C----------------------------ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCC
Confidence 1 0112346999999999994 456788999999999999999999999
Q ss_pred CC-CChHHHHHHHHhCCC-CCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 899 RG-KTRQKTFANILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 899 ~~-~~~~~~~~~i~~~~~-~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
.. ......+..+..... .++....++..+.+||.+||+.||.+||+ +.++++||||+..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~h~~~~~~ 290 (318)
T 2dyl_A 230 KNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPK----YNKLLEHSFIKRY 290 (318)
T ss_dssp TTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCC----HHHHTTSHHHHHH
T ss_pred CCCCccHHHHHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcC----HHHHhhCHHHHhc
Confidence 87 455566666666543 34444567899999999999999999999 9999999999863
No 191
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=3.4e-39 Score=383.66 Aligned_cols=254 Identities=22% Similarity=0.310 Sum_probs=219.1
Q ss_pred ccccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 001869 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (1002)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (1002)
.+.+...+|++.+.||+|+||.||+|.+..++..||||+++... .....+.+|+.+|+.++||||+++++++...+
T Consensus 214 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 289 (495)
T 1opk_A 214 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 289 (495)
T ss_dssp CCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS----SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred ccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc----cchHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 45677789999999999999999999999999999999987642 23567889999999999999999999999999
Q ss_pred eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccC
Q 001869 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
.+|+|||||.+|+|.+++.......++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 290 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 290 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369 (495)
T ss_dssp SCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCT
T ss_pred cEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceecc
Confidence 99999999999999999987656679999999999999999999999999999999999999999999999999996543
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCC
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~ 901 (1002)
... ........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.
T Consensus 370 ~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~ 423 (495)
T 1opk_A 370 GDT--------------------------YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 423 (495)
T ss_dssp TCC--------------------------EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred CCc--------------------------eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCC
Confidence 211 011123456789999999998889999999999999999998 99999988
Q ss_pred ChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001869 902 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 902 ~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
+..+.+..+. .....+....++..+.+||.+||+.||.+|||+.+
T Consensus 424 ~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 468 (495)
T 1opk_A 424 DLSQVYELLE-KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAE 468 (495)
T ss_dssp CGGGHHHHHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CHHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHH
Confidence 8776665544 34445555668899999999999999999999443
No 192
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=4.1e-39 Score=369.16 Aligned_cols=258 Identities=22% Similarity=0.312 Sum_probs=207.2
Q ss_pred ccccccCCcccccccccCCcEEEEEEEEc---CCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 001869 663 GEQINLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (1002)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 739 (1002)
...+..++|++.+.||+|+||.||+|.+. .++..||||+++... .......+.+|+.++++++||||+++++++.
T Consensus 39 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 116 (373)
T 2qol_A 39 AKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--TEKQRRDFLGEASIMGQFDHPNIIRLEGVVT 116 (373)
T ss_dssp SCBCCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred HhhcCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe
Confidence 34566789999999999999999999986 567789999987542 3455678899999999999999999999999
Q ss_pred eCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCc
Q 001869 740 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (1002)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~ 819 (1002)
..+.+|+||||+++++|.+++... ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.
T Consensus 117 ~~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 195 (373)
T 2qol_A 117 KSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGR 195 (373)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred eCCceEEEEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCcccc
Confidence 999999999999999999999764 3469999999999999999999999999999999999999999999999999996
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCC
Q 001869 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPF 898 (1002)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf 898 (1002)
........ ........+++.|+|||++.+..++.++|||||||++|+|++ |..||
T Consensus 196 ~~~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~ 251 (373)
T 2qol_A 196 VLEDDPEA------------------------AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251 (373)
T ss_dssp ------------------------------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTT
T ss_pred ccccCCcc------------------------ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCC
Confidence 54321110 001112346788999999998899999999999999999997 99999
Q ss_pred CCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhc
Q 001869 899 RGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 899 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
.+.+..+....+... ...+....++..+.+||.+||+.||.+||++.+.
T Consensus 252 ~~~~~~~~~~~i~~~-~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i 300 (373)
T 2qol_A 252 WEMSNQDVIKAVDEG-YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQI 300 (373)
T ss_dssp TTCCHHHHHHHHHTT-EECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCCHHHHHHHHHcC-CCCCCCccccHHHHHHHHHHhCcChhhCcCHHHH
Confidence 998887776665543 3444455678999999999999999999996543
No 193
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.1e-39 Score=364.62 Aligned_cols=266 Identities=23% Similarity=0.349 Sum_probs=196.6
Q ss_pred cccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHH-HHHhCCCCCcceEEEEEEeCC
Q 001869 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAERE-ILDMLDHPFVPALYASFQTKT 742 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~-il~~l~hpnIv~l~~~~~~~~ 742 (1002)
+.+..++|++++.||+|+||.||+|.+..+++.||||++.... .......+..|+. +++.++||||+++++++...+
T Consensus 17 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~ 94 (327)
T 3aln_A 17 WDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV--DEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREG 94 (327)
T ss_dssp ECCCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC--CHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSS
T ss_pred cccCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc--CchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCC
Confidence 4566789999999999999999999999999999999997642 2334445555665 677789999999999999999
Q ss_pred eEEEEEecCCCCcHHHHHhh---CCCCCCCHHHHHHHHHHHHHHHHHHHHc-CcccCCCCCCCEEEccCCcEEEEeccCC
Q 001869 743 HVCLITDYCPGGELFLLLDR---QPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~---~~~~~l~~~~i~~i~~qil~aL~yLH~~-gIiHrDLKP~NILl~~~g~vkL~DFG~a 818 (1002)
..|+||||+. ++|.+++.. .....+++..+..++.|++.||.|||++ ||+||||||+|||++.++.+||+|||++
T Consensus 95 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~ 173 (327)
T 3aln_A 95 DCWICMELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGIS 173 (327)
T ss_dssp EEEEEECCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSS
T ss_pred ceEEEEeecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCc
Confidence 9999999996 588877763 2245699999999999999999999999 9999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccc----cCCCCCChhhHHHHHHHHHHHHcC
Q 001869 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII----AGAGHTSAVDWWALGILLYEMLYG 894 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l----~~~~~~~~sDIwSlGvil~elltG 894 (1002)
...... .......||+.|+|||++ .+..++.++|||||||++|+|++|
T Consensus 174 ~~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g 225 (327)
T 3aln_A 174 GQLVDS----------------------------IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATG 225 (327)
T ss_dssp CC----------------------------------------------------------CCSHHHHHHHHHHHHHHHHS
T ss_pred eecccc----------------------------cccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHC
Confidence 653211 011223699999999998 456788999999999999999999
Q ss_pred CCCCCCCChH-HHHHHHHhCCC-CCC--CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChh
Q 001869 895 YTPFRGKTRQ-KTFANILHKDL-KFP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 964 (1002)
Q Consensus 895 ~~Pf~~~~~~-~~~~~i~~~~~-~~~--~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~ 964 (1002)
..||.+.... ..+..+..... .++ ....++..+.+||.+||+.||.+||| +.++++||||...++.
T Consensus 226 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~hp~~~~~~~~ 295 (327)
T 3aln_A 226 RFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPK----YKELLKHPFILMYEER 295 (327)
T ss_dssp CCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCC----HHHHTTSHHHHHHHHS
T ss_pred CCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcC----HHHHHhChHHHHhHhh
Confidence 9999875432 22222222221 111 12357889999999999999999999 9999999999875544
No 194
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.5e-39 Score=363.33 Aligned_cols=261 Identities=24% Similarity=0.358 Sum_probs=215.4
Q ss_pred cccccCCcccccccccCCcEEEEEEEEc-----CCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEE
Q 001869 664 EQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYAS 737 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~ 737 (1002)
+.+..++|++.+.||+|+||.||+|.+. .+++.||||++.... .......+.+|+.+++.+ +||||++++++
T Consensus 22 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 99 (316)
T 2xir_A 22 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGA 99 (316)
T ss_dssp HBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred eecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC--CcHHHHHHHHHHHHHHhcccCCCeeeEEEE
Confidence 3466789999999999999999999863 567899999997642 344556788999999999 79999999999
Q ss_pred EEeC-CeEEEEEecCCCCcHHHHHhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCE
Q 001869 738 FQTK-THVCLITDYCPGGELFLLLDRQPT--------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 802 (1002)
Q Consensus 738 ~~~~-~~~~lV~E~~~ggsL~~~l~~~~~--------------~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NI 802 (1002)
+... ..+|+||||+++++|.+++..... ..+++..++.++.||+.||.|||++||+||||||+||
T Consensus 100 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Ni 179 (316)
T 2xir_A 100 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 179 (316)
T ss_dssp ECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred EecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceE
Confidence 8765 458999999999999999986432 1288999999999999999999999999999999999
Q ss_pred EEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHH
Q 001869 803 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 882 (1002)
Q Consensus 803 Ll~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIw 882 (1002)
|++.++.+||+|||++........ ........||+.|+|||++.+..++.++|||
T Consensus 180 l~~~~~~~kl~Dfg~~~~~~~~~~-------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~ 234 (316)
T 2xir_A 180 LLSEKNVVKICDFGLARDIYKDPD-------------------------YVRKGDARLPLKWMAPETIFDRVYTIQSDVW 234 (316)
T ss_dssp EECGGGCEEECCCGGGSCTTTCTT-------------------------SEEETTEEECGGGCCHHHHHHCCCCHHHHHH
T ss_pred EECCCCCEEECCCccccccccCcc-------------------------ceeccCCCcceeecCchhhccccccchhHHH
Confidence 999999999999999865432110 1112345688999999999999999999999
Q ss_pred HHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 883 ALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 883 SlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
||||++|+|++ |..||.+......+...+......+....++..+.++|.+||+.||.+||| +.++++|
T Consensus 235 slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~~ 304 (316)
T 2xir_A 235 SFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT----FSELVEH 304 (316)
T ss_dssp HHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcccchhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHHH
Confidence 99999999998 999998866544444444433334444557899999999999999999999 7777765
No 195
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=5.7e-39 Score=377.85 Aligned_cols=254 Identities=22% Similarity=0.319 Sum_probs=215.6
Q ss_pred cccccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001869 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
..+.+..++|++.+.||+|+||.||+|.+. ++..||||+++... .....+.+|+.+|+.++||||+++++++. .
T Consensus 181 ~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~ 254 (454)
T 1qcf_A 181 DAWEIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS----MSVEAFLAEANVMKTLQHDKLVKLHAVVT-K 254 (454)
T ss_dssp TCSBCCGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTS----BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-S
T ss_pred cceeechHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCC----ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-C
Confidence 345677889999999999999999999985 47789999997643 23567889999999999999999999986 5
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
+.+|+|||||.+|+|.+++.......++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..
T Consensus 255 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~ 334 (454)
T 1qcf_A 255 EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVI 334 (454)
T ss_dssp SSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGB
T ss_pred CccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEc
Confidence 67899999999999999997543345899999999999999999999999999999999999999999999999999654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~ 900 (1002)
.... ........+++.|+|||++....++.++|||||||++|+|++ |..||.+
T Consensus 335 ~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~ 388 (454)
T 1qcf_A 335 EDNE--------------------------YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPG 388 (454)
T ss_dssp CCHH--------------------------HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CCCc--------------------------eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCC
Confidence 2110 001123356889999999998889999999999999999999 9999999
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhc
Q 001869 901 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
.+..+.+..+..+ ...+....++..+.+||.+||+.||.+|||+.+.
T Consensus 389 ~~~~~~~~~i~~~-~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i 435 (454)
T 1qcf_A 389 MSNPEVIRALERG-YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYI 435 (454)
T ss_dssp CCHHHHHHHHHHT-CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence 8888877776654 3445556688999999999999999999994443
No 196
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=9e-39 Score=360.69 Aligned_cols=259 Identities=20% Similarity=0.309 Sum_probs=216.2
Q ss_pred cccccCCcccccccccCCcEEEEEEEEc-------CCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEE
Q 001869 664 EQINLQHFRPIKPLGSGDTGSVHLVELC-------GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALY 735 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~-------~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~ 735 (1002)
+.+..++|++.+.||+|+||.||+|.+. .++..||+|++.... .......+.+|+.+++.+ +||||++++
T Consensus 30 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 107 (334)
T 2pvf_A 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLL 107 (334)
T ss_dssp TBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred ccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC--cHHHHHHHHHHHHHHHHhhcCCCEeeEE
Confidence 4466789999999999999999999985 457789999987542 345567888999999999 899999999
Q ss_pred EEEEeCCeEEEEEecCCCCcHHHHHhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCC
Q 001869 736 ASFQTKTHVCLITDYCPGGELFLLLDRQPT--------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 801 (1002)
Q Consensus 736 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~--------------~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~N 801 (1002)
+++...+.+|+||||+.+++|.+++..... ..++...++.++.||+.||.|||++||+||||||+|
T Consensus 108 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N 187 (334)
T 2pvf_A 108 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARN 187 (334)
T ss_dssp EEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred EEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccce
Confidence 999999999999999999999999986431 248999999999999999999999999999999999
Q ss_pred EEEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhH
Q 001869 802 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (1002)
Q Consensus 802 ILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDI 881 (1002)
||++.++.+||+|||++........ ........+|+.|+|||++.+..++.++||
T Consensus 188 Ill~~~~~~kL~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di 242 (334)
T 2pvf_A 188 VLVTENNVMKIADFGLARDINNIDY-------------------------YKKTTNGRLPVKWMAPEALFDRVYTHQSDV 242 (334)
T ss_dssp EEECTTCCEEECCCTTCEECTTTSS-------------------------EECCSCCCCCGGGCCHHHHHHCEECHHHHH
T ss_pred EEEcCCCCEEEcccccccccccccc-------------------------ccccCCCCcccceeChHHhcCCCcChHHHH
Confidence 9999999999999999865432110 011223457889999999988889999999
Q ss_pred HHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 882 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 882 wSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
|||||++|+|++ |..||.+....+....+.... ..+....++..+.+||.+||+.||.+||| +.++++
T Consensus 243 ~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~ 311 (334)
T 2pvf_A 243 WSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH-RMDKPANCTNELYMMMRDCWHAVPSQRPT----FKQLVE 311 (334)
T ss_dssp HHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred HHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCC-CCCCCccCCHHHHHHHHHHccCChhhCcC----HHHHHH
Confidence 999999999999 999999988877776666543 23334567899999999999999999999 555554
No 197
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.9e-39 Score=360.74 Aligned_cols=254 Identities=29% Similarity=0.421 Sum_probs=204.7
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccCh---hHHHHHHHHHHHHHhC----CCCCcceEEEEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR---NKVHRACAEREILDML----DHPFVPALYASF 738 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~---~~~~~~~~E~~il~~l----~hpnIv~l~~~~ 738 (1002)
...++|++.+.||+|+||.||+|.+..+++.||||++........ .....+.+|+.+++.+ +||||+++++++
T Consensus 28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~ 107 (312)
T 2iwi_A 28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF 107 (312)
T ss_dssp -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence 345789999999999999999999999999999999976533221 1223455689999888 899999999999
Q ss_pred EeCCeEEEEEec-CCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEc-cCCcEEEEecc
Q 001869 739 QTKTHVCLITDY-CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-GNGHVSLTDFD 816 (1002)
Q Consensus 739 ~~~~~~~lV~E~-~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~-~~g~vkL~DFG 816 (1002)
...+..++|||| +.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++ .++.+||+|||
T Consensus 108 ~~~~~~~~v~e~~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg 185 (312)
T 2iwi_A 108 ETQEGFMLVLERPLPAQDLFDYITEK--GPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG 185 (312)
T ss_dssp -----CEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCS
T ss_pred ecCCeEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcc
Confidence 999999999999 7899999999874 4599999999999999999999999999999999999999 78999999999
Q ss_pred CCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCC-ChhhHHHHHHHHHHHHcCC
Q 001869 817 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHT-SAVDWWALGILLYEMLYGY 895 (1002)
Q Consensus 817 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~-~~sDIwSlGvil~elltG~ 895 (1002)
++...... ......||+.|+|||++.+..+. .++|||||||++|+|++|+
T Consensus 186 ~~~~~~~~-----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~ 236 (312)
T 2iwi_A 186 SGALLHDE-----------------------------PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGD 236 (312)
T ss_dssp SCEECCSS-----------------------------CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSS
T ss_pred hhhhcccC-----------------------------cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCC
Confidence 98654311 11235699999999999776664 4899999999999999999
Q ss_pred CCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCC
Q 001869 896 TPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 962 (1002)
Q Consensus 896 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 962 (1002)
.||.... .+......++ ..++..+.+||.+||+.||.+||| +.++++||||+...
T Consensus 237 ~pf~~~~------~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rps----~~e~l~~~~~~~~~ 291 (312)
T 2iwi_A 237 IPFERDQ------EILEAELHFP--AHVSPDCCALIRRCLAPKPSSRPS----LEEILLDPWMQTPA 291 (312)
T ss_dssp CSCCSHH------HHHHTCCCCC--TTSCHHHHHHHHHHTCSSTTTSCC----HHHHHHSTTTCC--
T ss_pred CCCCChH------HHhhhccCCc--ccCCHHHHHHHHHHccCChhhCcC----HHHHhcChhhcCch
Confidence 9997532 2344444444 347889999999999999999999 99999999999753
No 198
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.1e-38 Score=352.12 Aligned_cols=257 Identities=22% Similarity=0.325 Sum_probs=200.8
Q ss_pred cccccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001869 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
+..++..++|++.+.||+|+||.||+|.+.. .+|+|+++... ........+.+|+.+++.++||||++++++. ..
T Consensus 17 ~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~ 91 (289)
T 3og7_A 17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TA 91 (289)
T ss_dssp -CCBCCTTSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSS-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CS
T ss_pred CCCccCccceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccC-CCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cC
Confidence 3456788999999999999999999998643 59999987642 3455667889999999999999999999955 55
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
+..++||||+.+++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 92 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 170 (289)
T 3og7_A 92 PQLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEK 170 (289)
T ss_dssp SSCEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-----
T ss_pred CccEEEEEecCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceecccc
Confidence 6789999999999999999654 356999999999999999999999999999999999999999999999999998643
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCccccccccc---CCCCCChhhHHHHHHHHHHHHcCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
.... .........||+.|+|||++. +..++.++|||||||++|+|++|..||
T Consensus 171 ~~~~-------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~ 225 (289)
T 3og7_A 171 SRWS-------------------------GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225 (289)
T ss_dssp --------------------------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred cccc-------------------------ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCc
Confidence 2110 011123457999999999986 566788999999999999999999999
Q ss_pred CCCChHHHHHHHHhC-CCCCC---CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001869 899 RGKTRQKTFANILHK-DLKFP---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 899 ~~~~~~~~~~~i~~~-~~~~~---~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
.+......+...+.. ..... ....++..+.+||.+||+.||.+||| +.+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~ell 280 (289)
T 3og7_A 226 SNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPS----FPRIL 280 (289)
T ss_dssp SSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHH
T ss_pred cccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCC----HHHHH
Confidence 886665555554433 22211 12357889999999999999999999 55554
No 199
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.1e-38 Score=354.04 Aligned_cols=257 Identities=21% Similarity=0.311 Sum_probs=209.6
Q ss_pred cccCCcccccccccCCcEEEEEEE----EcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVE----LCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
+....|++++.||+|+||.||+|. +..+++.||+|++.... .......+.+|+.+++.++||||+++++++...
T Consensus 18 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 95 (302)
T 4e5w_A 18 FEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICTED 95 (302)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-
T ss_pred hhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc--cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecC
Confidence 456789999999999999999999 56789999999997543 233456788999999999999999999999876
Q ss_pred --CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCc
Q 001869 742 --THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (1002)
Q Consensus 742 --~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~ 819 (1002)
+.+|+||||+++++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.
T Consensus 96 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 96 GGNGIKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp --CCEEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred CCceEEEEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccc
Confidence 67899999999999999996542 459999999999999999999999999999999999999999999999999996
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCC
Q 001869 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 899 (1002)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~ 899 (1002)
........ ........||+.|+|||++.+..++.++|||||||++|+|++|..|+.
T Consensus 175 ~~~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 230 (302)
T 4e5w_A 175 AIETDKEY------------------------YTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDS 230 (302)
T ss_dssp ECCTTCCE------------------------EECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred cccCCCcc------------------------eeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCc
Confidence 64322110 012234568899999999999889999999999999999999998763
Q ss_pred C--------------CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001869 900 G--------------KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 900 ~--------------~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
. ......+...+......+....++..+.+||.+||+.||.+||| +.+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll 294 (302)
T 4e5w_A 231 SPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTS----FQNLI 294 (302)
T ss_dssp SHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCC----HHHHH
T ss_pred chhhHHhhccCCcccccCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCC----HHHHH
Confidence 2 22233333444444555556678999999999999999999999 55554
No 200
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=7.3e-39 Score=360.24 Aligned_cols=255 Identities=22% Similarity=0.337 Sum_probs=212.9
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEE--EEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCC
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYF--AMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT 742 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~v--aiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~ 742 (1002)
+..++|++.+.||+|+||.||+|.+..++..+ |+|.+... ........+.+|+.+++++ +||||+++++++.+.+
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 99 (327)
T 1fvr_A 22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG 99 (327)
T ss_dssp CCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT
T ss_pred ccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccc--cchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCC
Confidence 55679999999999999999999999888866 99988753 2334456788999999999 8999999999999999
Q ss_pred eEEEEEecCCCCcHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCC
Q 001869 743 HVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 808 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g 808 (1002)
.+|+||||+++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~ 179 (327)
T 1fvr_A 100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY 179 (327)
T ss_dssp EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGG
T ss_pred ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCC
Confidence 9999999999999999997642 24699999999999999999999999999999999999999999
Q ss_pred cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHH
Q 001869 809 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 888 (1002)
Q Consensus 809 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil 888 (1002)
.+||+|||++..... ........+++.|+|||++.+..++.++|||||||++
T Consensus 180 ~~kL~Dfg~~~~~~~----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 231 (327)
T 1fvr_A 180 VAKIADFGLSRGQEV----------------------------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 231 (327)
T ss_dssp CEEECCTTCEESSCE----------------------------ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHH
T ss_pred eEEEcccCcCccccc----------------------------cccccCCCCCccccChhhhccccCCchhcchHHHHHH
Confidence 999999999853210 0111233578899999999888889999999999999
Q ss_pred HHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 889 YEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 889 ~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
|+|++ |..||.+.+....+..+... ...+....++..+.+||.+||+.||.+||| +.++++|
T Consensus 232 ~ellt~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~~ 294 (327)
T 1fvr_A 232 WEIVSLGGTPYCGMTCAELYEKLPQG-YRLEKPLNCDDEVYDLMRQCWREKPYERPS----FAQILVS 294 (327)
T ss_dssp HHHHTTSCCTTTTCCHHHHHHHGGGT-CCCCCCTTBCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred HHHHcCCCCCCCCCcHHHHHHHhhcC-CCCCCCCCCCHHHHHHHHHHccCChhhCcC----HHHHHHH
Confidence 99998 99999998887777666554 333444567899999999999999999999 6666554
No 201
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-38 Score=348.87 Aligned_cols=259 Identities=20% Similarity=0.282 Sum_probs=216.0
Q ss_pred ccccCCccccc-ccccCCcEEEEEEEEc--CCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001869 665 QINLQHFRPIK-PLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 665 ~i~~~~y~i~~-~LG~G~~g~Vy~a~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
.+..++|.++. .||+|+||.||+|.+. .++..||+|+++.. ........+.+|+.+++.++||||+++++++ ..
T Consensus 5 ~~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~ 81 (287)
T 1u59_A 5 FLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG--TEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QA 81 (287)
T ss_dssp BCCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS--CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ES
T ss_pred cccHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc--cchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cC
Confidence 34567888887 9999999999999863 56889999999764 2455677889999999999999999999999 45
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
+..|+||||+.+++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++...
T Consensus 82 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 160 (287)
T 1u59_A 82 EALMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160 (287)
T ss_dssp SSEEEEEECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred CCcEEEEEeCCCCCHHHHHHhC-CccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeee
Confidence 6689999999999999999653 345999999999999999999999999999999999999999999999999999664
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~ 900 (1002)
...... ........||+.|+|||++.+..++.++|||||||++|+|++ |..||.+
T Consensus 161 ~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~ 216 (287)
T 1u59_A 161 GADDSY------------------------YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKK 216 (287)
T ss_dssp TTCSCE------------------------ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred ccCcce------------------------eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCccc
Confidence 321110 011223457899999999988889999999999999999998 9999998
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCC
Q 001869 901 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHP 956 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp 956 (1002)
....+....+.... ..+....++..+.+||.+||+.||.+||+ +.++++|.
T Consensus 217 ~~~~~~~~~i~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~l~~~l 267 (287)
T 1u59_A 217 MKGPEVMAFIEQGK-RMECPPECPPELYALMSDCWIYKWEDRPD----FLTVEQRM 267 (287)
T ss_dssp CCTHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHTTCSSGGGSCC----HHHHHHHH
T ss_pred CCHHHHHHHHhcCC-cCCCCCCcCHHHHHHHHHHcCCChhhCcC----HHHHHHHH
Confidence 88877776666543 22333467899999999999999999999 77777653
No 202
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=7.8e-39 Score=359.97 Aligned_cols=274 Identities=20% Similarity=0.316 Sum_probs=215.8
Q ss_pred cccccCCcccccccccCCcEEEEEEE----EcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 001869 664 EQINLQHFRPIKPLGSGDTGSVHLVE----LCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 739 (1002)
.-+..++|++++.||+|+||.||+|. +..+++.||||++... .......+.+|+.+++.++||||+++++++.
T Consensus 18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 94 (327)
T 3lxl_A 18 TIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILKALHSDFIVKYRGVSY 94 (327)
T ss_dssp CBCCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred hhhchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC---CHHHHHHHHHHHHHHHhcCCCceeEEEEEEe
Confidence 34567899999999999999999999 4678999999998754 3455677899999999999999999999886
Q ss_pred --eCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccC
Q 001869 740 --TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (1002)
Q Consensus 740 --~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~ 817 (1002)
....+|+||||+++++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus 95 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 173 (327)
T 3lxl_A 95 GPGRQSLRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGL 173 (327)
T ss_dssp CSSSCEEEEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGG
T ss_pred cCCCceEEEEEeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEccccc
Confidence 4567999999999999999997642 3589999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCC
Q 001869 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~P 897 (1002)
+......... ........||+.|+|||++.+..++.++|||||||++|+|++|..|
T Consensus 174 ~~~~~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p 229 (327)
T 3lxl_A 174 AKLLPLDKDY------------------------YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDK 229 (327)
T ss_dssp CEECCTTCSE------------------------EECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCG
T ss_pred ceecccCCcc------------------------ceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCC
Confidence 9654321110 0112335688999999999988899999999999999999999999
Q ss_pred CCCCChH--------------HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCCh
Q 001869 898 FRGKTRQ--------------KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 963 (1002)
Q Consensus 898 f~~~~~~--------------~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 963 (1002)
|...... ..+...+......+....++..+.+||.+||+.||.+|||+.+.+ +.|+..|.....+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell-~~L~~~~~~~~~~ 308 (327)
T 3lxl_A 230 SCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALG-PQLDMLWSGSRGC 308 (327)
T ss_dssp GGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH-HHHHHC-------
T ss_pred CccccchhhhhcccccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHH-HHHHHHHhhhcCc
Confidence 8653321 223333444455555667899999999999999999999943322 2256666665555
Q ss_pred hhh
Q 001869 964 ALV 966 (1002)
Q Consensus 964 ~~~ 966 (1002)
...
T Consensus 309 ~~~ 311 (327)
T 3lxl_A 309 ETH 311 (327)
T ss_dssp ---
T ss_pred ccc
Confidence 443
No 203
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=5.8e-39 Score=354.13 Aligned_cols=260 Identities=23% Similarity=0.323 Sum_probs=210.9
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcC-CC--eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCG-SG--QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~-~~--~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
.+..++|++++.||+|+||.||+|.+.. ++ ..||+|+++............+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 93 (291)
T 1u46_A 14 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP 93 (291)
T ss_dssp ECCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred ccchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC
Confidence 3556799999999999999999998643 33 36899999876555556678899999999999999999999999876
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
+ .++||||+.+++|.+++... ...+++..+..++.||+.||.|||++||+|+||||+||+++.++.+||+|||++...
T Consensus 94 ~-~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 171 (291)
T 1u46_A 94 P-MKMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171 (291)
T ss_dssp S-CEEEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred C-ceeeEecccCCCHHHHHHhc-cCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccc
Confidence 5 89999999999999999764 245899999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~ 900 (1002)
...... ........+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+
T Consensus 172 ~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 227 (291)
T 1u46_A 172 PQNDDH------------------------YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG 227 (291)
T ss_dssp CC-CCE------------------------EEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred cccccc------------------------hhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 321110 011223467889999999988888999999999999999999 9999999
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 901 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
.+....+..+.......+....++..+.++|.+||..||.+||| +.++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~l~~ 277 (291)
T 1u46_A 228 LNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPT----FVALRD 277 (291)
T ss_dssp CCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred CCHHHHHHHHHccCCCCCCCcCcCHHHHHHHHHHccCCcccCcC----HHHHHH
Confidence 99888888888777667766778999999999999999999999 666665
No 204
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.7e-39 Score=359.46 Aligned_cols=253 Identities=23% Similarity=0.319 Sum_probs=205.7
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEE----EEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYF----AMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~v----aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (1002)
.+..++|++++.||+|+||.||+|.+..+++.+ |+|.+... ........+.+|+.+++.++||||+++++++..
T Consensus 11 ~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 88 (327)
T 3lzb_A 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLT 88 (327)
T ss_dssp ECCTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCC--SSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES
T ss_pred ccCHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccc--cCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec
Confidence 355689999999999999999999998887755 56655432 133455778899999999999999999999987
Q ss_pred CCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcc
Q 001869 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
.. .++|++|+.+++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus 89 ~~-~~~v~~~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~ 166 (327)
T 3lzb_A 89 ST-VQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp SS-EEEEECCCSSCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred CC-ceEEEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence 65 78999999999999999765 34599999999999999999999999999999999999999999999999999965
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCC
Q 001869 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFR 899 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~ 899 (1002)
....... .......||+.|+|||++.+..++.++|||||||++|+|++ |..||.
T Consensus 167 ~~~~~~~-------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~ 221 (327)
T 3lzb_A 167 LGAEEKE-------------------------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221 (327)
T ss_dssp --------------------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred ccCcccc-------------------------ccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCC
Confidence 4321110 11123457889999999999999999999999999999999 999999
Q ss_pred CCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001869 900 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 900 ~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
+.........+. .....+....++.++.+||.+||+.||.+||++.+
T Consensus 222 ~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e 268 (327)
T 3lzb_A 222 GIPASEISSILE-KGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRE 268 (327)
T ss_dssp TCCGGGHHHHHH-TTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCCHHHHHHHHH-cCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHH
Confidence 887766555444 34445555668999999999999999999999443
No 205
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-38 Score=356.08 Aligned_cols=256 Identities=21% Similarity=0.287 Sum_probs=210.4
Q ss_pred cccccCCcccccccccCCcEEEEEEEEcCCC----eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 001869 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSG----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~----~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 739 (1002)
..+....|++.+.||+|+||.||+|.+..++ ..||+|++.... .......+.+|+.+++.++||||+++++++.
T Consensus 39 ~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 116 (333)
T 1mqb_A 39 TEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS 116 (333)
T ss_dssp CBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred ccCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEe
Confidence 4567789999999999999999999986553 469999987542 3445567889999999999999999999999
Q ss_pred eCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCc
Q 001869 740 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (1002)
Q Consensus 740 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~ 819 (1002)
..+..|+||||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus 117 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 195 (333)
T 1mqb_A 117 KYKPMMIITEYMENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSR 195 (333)
T ss_dssp SSSSEEEEEECCTTEEHHHHHHHT-TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred cCCCcEEEEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcch
Confidence 999999999999999999999764 3469999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCC
Q 001869 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPF 898 (1002)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf 898 (1002)
........ ........+|+.|+|||++.+..++.++|||||||++|+|++ |..||
T Consensus 196 ~~~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf 251 (333)
T 1mqb_A 196 VLEDDPEA------------------------TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPY 251 (333)
T ss_dssp ---------------------------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred hhcccccc------------------------ccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCc
Confidence 54321110 001122356889999999999999999999999999999998 99999
Q ss_pred CCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001869 899 RGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 899 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
.+.+..+....+... ...+....++..+.+||.+||+.||.+||++.+
T Consensus 252 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ 299 (333)
T 1mqb_A 252 WELSNHEVMKAINDG-FRLPTPMDCPSAIYQLMMQCWQQERARRPKFAD 299 (333)
T ss_dssp TTCCHHHHHHHHHTT-CCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred ccCCHHHHHHHHHCC-CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 988887777666554 344445568899999999999999999999443
No 206
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.9e-38 Score=348.13 Aligned_cols=251 Identities=23% Similarity=0.322 Sum_probs=212.0
Q ss_pred cccccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001869 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
..+.+..++|++++.||+|+||.||+|.+. ++..||+|.+.... .....+.+|+.+++.++||||+++++++..
T Consensus 6 ~~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~- 79 (279)
T 1qpc_A 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS----MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ- 79 (279)
T ss_dssp CTTBCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS----SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred hhcccCHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCc----ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-
Confidence 456677889999999999999999999974 57789999987542 234678899999999999999999998864
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
+..|+||||+.+++|.+++.......+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++...
T Consensus 80 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 159 (279)
T 1qpc_A 80 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI 159 (279)
T ss_dssp SSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred CCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccc
Confidence 56899999999999999997543335999999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~ 900 (1002)
..... .......+++.|+|||++.+..++.++|||||||++|+|++ |..||.+
T Consensus 160 ~~~~~--------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 213 (279)
T 1qpc_A 160 EDNEY--------------------------TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 213 (279)
T ss_dssp SSSCE--------------------------ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred cCccc--------------------------ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcc
Confidence 32110 11123457889999999988888999999999999999999 9999999
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCC
Q 001869 901 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS 945 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~ 945 (1002)
.+..+.+..+... ........++..+.+||.+||+.||.+|||+
T Consensus 214 ~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~ 257 (279)
T 1qpc_A 214 MTNPEVIQNLERG-YRMVRPDNCPEELYQLMRLCWKERPEDRPTF 257 (279)
T ss_dssp CCHHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred cCHHHHHHHHhcc-cCCCCcccccHHHHHHHHHHhccChhhCCCH
Confidence 8887777666554 3333445678999999999999999999993
No 207
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.8e-38 Score=348.78 Aligned_cols=257 Identities=23% Similarity=0.296 Sum_probs=212.0
Q ss_pred cccccCCcccccccccCCcEEEEEEEEcC---CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 001869 664 EQINLQHFRPIKPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (1002)
..+..++|++.+.||+|+||.||+|.+.. ++..||+|++.... .......+.+|+.+++.++||||+++++++.+
T Consensus 7 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 84 (281)
T 3cc6_A 7 YGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC--TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE 84 (281)
T ss_dssp CSCCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS--CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS
T ss_pred ceecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc--CchHHHHHHHHHHHHHhCCCCCcceEEEEEcC
Confidence 34567899999999999999999999754 34579999987642 34556788999999999999999999999875
Q ss_pred CCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcc
Q 001869 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
+ ..|+||||+.+++|.+++... ...++...+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++..
T Consensus 85 ~-~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 85 E-PTWIIMELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRY 162 (281)
T ss_dssp S-SCEEEEECCTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred C-CCEEEEecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcc
Confidence 4 568999999999999999764 24589999999999999999999999999999999999999999999999999865
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCC
Q 001869 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFR 899 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~ 899 (1002)
..... ........||+.|+|||++.+..++.++|||||||++|+|++ |..||.
T Consensus 163 ~~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~ 216 (281)
T 3cc6_A 163 IEDED--------------------------YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFF 216 (281)
T ss_dssp C-----------------------------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred ccccc--------------------------ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcc
Confidence 43110 011123457889999999988889999999999999999998 999998
Q ss_pred CCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 900 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 900 ~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
..........+.... ..+....++..+.+||.+||+.||.+||| +.+++++
T Consensus 217 ~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~ell~~ 267 (281)
T 3cc6_A 217 WLENKDVIGVLEKGD-RLPKPDLCPPVLYTLMTRCWDYDPSDRPR----FTELVCS 267 (281)
T ss_dssp TSCGGGHHHHHHHTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred cCChHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHccCCchhCcC----HHHHHHH
Confidence 877766665555443 33344457889999999999999999999 6666543
No 208
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=2.6e-38 Score=349.52 Aligned_cols=254 Identities=21% Similarity=0.289 Sum_probs=209.2
Q ss_pred ccccCCccccc-ccccCCcEEEEEEEE--cCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001869 665 QINLQHFRPIK-PLGSGDTGSVHLVEL--CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 665 ~i~~~~y~i~~-~LG~G~~g~Vy~a~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
.+..++|++.+ .||+|+||.||+|.+ ..+++.||||++.... ........+.+|+.+++.++||||+++++++ ..
T Consensus 12 ~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~ 89 (291)
T 1xbb_A 12 YLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLDNPYIVRMIGIC-EA 89 (291)
T ss_dssp BCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ES
T ss_pred eecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccc-cCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CC
Confidence 45567899998 999999999999954 5668899999997653 2344567889999999999999999999999 56
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
+..|+||||+.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 90 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 167 (291)
T 1xbb_A 90 ESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 167 (291)
T ss_dssp SSEEEEEECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred CCcEEEEEeCCCCCHHHHHHhC--cCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceee
Confidence 7789999999999999999874 45999999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~ 900 (1002)
...... ........|++.|+|||++.+..++.++|||||||++|+|++ |..||.+
T Consensus 168 ~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 223 (291)
T 1xbb_A 168 RADENY------------------------YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 223 (291)
T ss_dssp CTTCSE------------------------EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred ccCCCc------------------------ccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCC
Confidence 321110 011122357889999999988888999999999999999999 9999999
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001869 901 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
.+.......+.... ..+....++..+.+||.+||+.||.+||++.+
T Consensus 224 ~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ 269 (291)
T 1xbb_A 224 MKGSEVTAMLEKGE-RMGCPAGCPREMYDLMNLCWTYDVENRPGFAA 269 (291)
T ss_dssp CCHHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred CCHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 88877766665543 23334467899999999999999999999443
No 209
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=8.2e-39 Score=359.21 Aligned_cols=250 Identities=22% Similarity=0.296 Sum_probs=197.3
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC--
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT-- 742 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-- 742 (1002)
.+..++|++++.||+|+||.||+|.+. ++.||||++... .........|+.+++.++||||+++++++....
T Consensus 20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 93 (322)
T 3soc_A 20 YFQSMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQ----DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSV 93 (322)
T ss_dssp EETTEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSS
T ss_pred ccchhhchhhheecccCceEEEEEEEC--CCEEEEEEeecC----chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCC
Confidence 456789999999999999999999884 789999998653 233345566888899999999999999998744
Q ss_pred --eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc----------CcccCCCCCCCEEEccCCcE
Q 001869 743 --HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ----------GIIYRDLKPENVLLQGNGHV 810 (1002)
Q Consensus 743 --~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~----------gIiHrDLKP~NILl~~~g~v 810 (1002)
.+|+|||||++|+|.+++... .+++..++.++.||+.||+|||++ ||+||||||+|||++.++.+
T Consensus 94 ~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~ 170 (322)
T 3soc_A 94 DVDLWLITAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTA 170 (322)
T ss_dssp SEEEEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCE
T ss_pred CceEEEEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeE
Confidence 479999999999999999763 489999999999999999999999 99999999999999999999
Q ss_pred EEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC-----CCCChhhHHHHH
Q 001869 811 SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-----GHTSAVDWWALG 885 (1002)
Q Consensus 811 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-----~~~~~sDIwSlG 885 (1002)
||+|||++........ .......+||+.|+|||++.+. .++.++||||||
T Consensus 171 kL~DFg~a~~~~~~~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG 225 (322)
T 3soc_A 171 CIADFGLALKFEAGKS-------------------------AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMG 225 (322)
T ss_dssp EECCCTTCEEECTTSC-------------------------CCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHH
T ss_pred EEccCCcccccccccC-------------------------ccccccCccCccccCHhhcccccccCcCCCccchhHHHH
Confidence 9999999965432111 0112345799999999999873 445688999999
Q ss_pred HHHHHHHcCCCCCCCCCh---------------HHHHHHHHhCCCCCCCCC------CCCHHHHHHHHHccccCcCCCCC
Q 001869 886 ILLYEMLYGYTPFRGKTR---------------QKTFANILHKDLKFPSST------PTSLHAKQLMYRLLHRDPKSRLG 944 (1002)
Q Consensus 886 vil~elltG~~Pf~~~~~---------------~~~~~~i~~~~~~~~~~~------~~s~~~~~Ll~~~L~~dP~~Rpt 944 (1002)
|++|+|++|+.||.+... ...+..........+... ..+..+.+||.+||+.||.+|||
T Consensus 226 ~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps 305 (322)
T 3soc_A 226 LVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLS 305 (322)
T ss_dssp HHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCC
T ss_pred HHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcC
Confidence 999999999999975321 122222222222222111 12345899999999999999999
Q ss_pred Chhc
Q 001869 945 SHEG 948 (1002)
Q Consensus 945 ~~~~ 948 (1002)
+.++
T Consensus 306 ~~el 309 (322)
T 3soc_A 306 AGCV 309 (322)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 210
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=9.6e-39 Score=350.45 Aligned_cols=251 Identities=23% Similarity=0.371 Sum_probs=204.4
Q ss_pred hhccccccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEE
Q 001869 659 ILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASF 738 (1002)
Q Consensus 659 ~~~~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~ 738 (1002)
....++.+..++|++++.||+|+||.||++.+ +++.||+|++.... ....+.+|+.+++.++||||+++++++
T Consensus 11 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~~iv~~~~~~ 83 (278)
T 1byg_A 11 FYRSGWALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVI 83 (278)
T ss_dssp ----CCBCCGGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC-------HHHHHTHHHHTTCCCTTBCCEEEEE
T ss_pred hhhccccCChhhceEEeEEecCCCceEEEEEE--cCCEEEEEEecchh-----HHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 34456678889999999999999999999988 58899999987542 456788999999999999999999987
Q ss_pred Ee-CCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccC
Q 001869 739 QT-KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 817 (1002)
Q Consensus 739 ~~-~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~ 817 (1002)
.. .+.+|+||||+++++|.+++.......+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~ 163 (278)
T 1byg_A 84 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL 163 (278)
T ss_dssp CCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC
T ss_pred EcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeeccc
Confidence 54 45789999999999999999865333488999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCC
Q 001869 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYT 896 (1002)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~ 896 (1002)
+...... .....+++.|+|||++.+..++.++|||||||++|+|++ |..
T Consensus 164 ~~~~~~~------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~ 213 (278)
T 1byg_A 164 TKEASST------------------------------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 213 (278)
T ss_dssp ------------------------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred ccccccc------------------------------ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCC
Confidence 8543210 112357889999999998889999999999999999998 999
Q ss_pred CCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001869 897 PFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 897 Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
||...........+... ........++..+.+||.+||+.||.+|||+.+
T Consensus 214 p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ 263 (278)
T 1byg_A 214 PYPRIPLKDVVPRVEKG-YKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQ 263 (278)
T ss_dssp SCTTSCGGGHHHHHTTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCCCCCHHHHHHHHhcC-CCCCCcccCCHHHHHHHHHHhcCChhhCCCHHH
Confidence 99988776666655443 333444567899999999999999999999433
No 211
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=4.7e-39 Score=360.81 Aligned_cols=256 Identities=21% Similarity=0.240 Sum_probs=206.7
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (1002)
..++|++.+.||+|+||.||+|.+ .+++.||||.+... .......+.+|+.+++.++||||+++++++...+..|+
T Consensus 37 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (321)
T 2qkw_B 37 ATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPE---SSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMIL 112 (321)
T ss_dssp CCCCCSCCCCSCBCSSSEEEEEEC-TTCCEEEEEECCSC---CSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEE
T ss_pred HHhccCccceeecCCCeeEEEEEE-CCCCEEEEEEeccc---ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEE
Confidence 357999999999999999999997 46899999988754 23456778899999999999999999999999999999
Q ss_pred EEecCCCCcHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCC
Q 001869 747 ITDYCPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 824 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~--~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~ 824 (1002)
||||+++++|.+++.... ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 113 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 192 (321)
T 2qkw_B 113 IYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTEL 192 (321)
T ss_dssp EEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSS
T ss_pred EEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 999999999999986542 235899999999999999999999999999999999999999999999999998653211
Q ss_pred CCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChH
Q 001869 825 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 904 (1002)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~ 904 (1002)
. .........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+....
T Consensus 193 ~-------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~ 247 (321)
T 2qkw_B 193 D-------------------------QTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR 247 (321)
T ss_dssp S-------------------------CCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSS
T ss_pred c-------------------------ccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcH
Confidence 0 011123456899999999998889999999999999999999999999764332
Q ss_pred HHH-------HHHHhCCCC------C--CCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 905 KTF-------ANILHKDLK------F--PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 905 ~~~-------~~i~~~~~~------~--~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
... .......+. . .....++..+.+|+.+||+.||.+||| +.++++|
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps----~~ell~~ 309 (321)
T 2qkw_B 248 EMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPS----MGDVLWK 309 (321)
T ss_dssp SCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred HHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcC----HHHHHHH
Confidence 111 111111111 0 011223457889999999999999999 7777655
No 212
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.2e-38 Score=347.13 Aligned_cols=252 Identities=21% Similarity=0.248 Sum_probs=205.9
Q ss_pred CcccccccccCCcEEEEEEEEcCCCe---EEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE-E
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQ---YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV-C 745 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~---~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~-~ 745 (1002)
.|++.+.||+|+||.||+|.+..++. .+|+|.+... ........+.+|+.+++.++||||+++++++.+.+.. +
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 99 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI--TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPH 99 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC--CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeecccc--ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcE
Confidence 57777999999999999999765544 8999998753 3455667888999999999999999999999876655 9
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+||||+.+++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 100 ~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 100 VLLPYMCHGDLLQFIRSP-QRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp EEECCCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EEEecccCCCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 999999999999999763 3568999999999999999999999999999999999999999999999999996543111
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChH
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 904 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~ 904 (1002)
. ..........||+.|+|||.+.+..++.++|||||||++|+|++ |.+||.+.+..
T Consensus 179 ~-----------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~ 235 (298)
T 3pls_A 179 Y-----------------------YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPF 235 (298)
T ss_dssp G-----------------------GCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGG
T ss_pred c-----------------------cccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHH
Confidence 0 01112234578999999999999999999999999999999999 55555555555
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhc
Q 001869 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
.....+.. ....+....++..+.+||.+||+.||.+|||+.+.
T Consensus 236 ~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l 278 (298)
T 3pls_A 236 DLTHFLAQ-GRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVL 278 (298)
T ss_dssp GHHHHHHT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHhhc-CCCCCCCccchHHHHHHHHHHccCChhhCcCHHHH
Confidence 54444443 33445555678999999999999999999994433
No 213
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=3.6e-38 Score=352.10 Aligned_cols=259 Identities=22% Similarity=0.302 Sum_probs=207.3
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcC---CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
.+..++|++.+.||+|+||.||+|.+.. ++..||+|++.... ........+.+|+.+++.++||||+++++++...
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 108 (313)
T 3brb_A 30 VIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDN-SSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEM 108 (313)
T ss_dssp BCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---C-CCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-
T ss_pred ccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccc-cchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeec
Confidence 3556789999999999999999998865 56689999987642 2445567788999999999999999999999765
Q ss_pred C-----eEEEEEecCCCCcHHHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEE
Q 001869 742 T-----HVCLITDYCPGGELFLLLDRQ----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSL 812 (1002)
Q Consensus 742 ~-----~~~lV~E~~~ggsL~~~l~~~----~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL 812 (1002)
+ ..|+||||+.+++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||
T Consensus 109 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl 188 (313)
T 3brb_A 109 SSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCV 188 (313)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEE
T ss_pred cccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEE
Confidence 4 459999999999999998532 2356999999999999999999999999999999999999999999999
Q ss_pred EeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHH
Q 001869 813 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML 892 (1002)
Q Consensus 813 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ell 892 (1002)
+|||++........ ........+++.|+|||++.+..++.++|||||||++|+|+
T Consensus 189 ~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 243 (313)
T 3brb_A 189 ADFGLSKKIYSGDY-------------------------YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIA 243 (313)
T ss_dssp CSCSCC-----------------------------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHH
T ss_pred eecCcceecccccc-------------------------cCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHH
Confidence 99999865421110 01122345788999999999999999999999999999999
Q ss_pred c-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 893 Y-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 893 t-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
+ |..||.+.........+.... ..+....++..+.+||.+||..||.+||| +.++++
T Consensus 244 ~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~l~~ 301 (313)
T 3brb_A 244 TRGMTPYPGVQNHEMYDYLLHGH-RLKQPEDCLDELYEIMYSCWRTDPLDRPT----FSVLRL 301 (313)
T ss_dssp TTSCCSSTTCCGGGHHHHHHTTC-CCCCBTTCCHHHHHHHHHTTCSSGGGSCC----HHHHHH
T ss_pred hcCCCCCccCCHHHHHHHHHcCC-CCCCCccccHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence 9 999999888877777666553 23334457889999999999999999999 666654
No 214
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.6e-38 Score=371.89 Aligned_cols=261 Identities=23% Similarity=0.353 Sum_probs=214.6
Q ss_pred ccccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 001869 663 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (1002)
Q Consensus 663 ~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (1002)
.+.+..++|++.+.||+|+||.||+|.+.. +..||||+++.... ....+.+|+.+|+.++||||+++++++.. +
T Consensus 178 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~ 251 (452)
T 1fmk_A 178 AWEIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E 251 (452)
T ss_dssp CSBCCGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S
T ss_pred ccccChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCC----CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-C
Confidence 456777899999999999999999999965 46799999986432 24578899999999999999999999876 6
Q ss_pred eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccC
Q 001869 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
.+|+|||||.+|+|.+++.......++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++....
T Consensus 252 ~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 331 (452)
T 1fmk_A 252 PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 331 (452)
T ss_dssp SCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC---
T ss_pred ceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecC
Confidence 78999999999999999976444569999999999999999999999999999999999999999999999999996543
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCC
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~ 901 (1002)
... ........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.
T Consensus 332 ~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~ 385 (452)
T 1fmk_A 332 DNE--------------------------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 385 (452)
T ss_dssp -------------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred CCc--------------------------eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCC
Confidence 110 011123457889999999998889999999999999999999 99999998
Q ss_pred ChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc--CCCcCC
Q 001869 902 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK--HPFFKG 960 (1002)
Q Consensus 902 ~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~--Hp~f~~ 960 (1002)
...+.+..+..+ ...+....++..+.+||.+||+.||.+||| +++|++ ..+|+.
T Consensus 386 ~~~~~~~~i~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt----~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 386 VNREVLDQVERG-YRMPCPPECPESLHDLMCQCWRKEPEERPT----FEYLQAFLEDYFTS 441 (452)
T ss_dssp CHHHHHHHHHTT-CCCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHHHHHTTTSC
T ss_pred CHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHccCChhhCcC----HHHHHHHHHHHhcc
Confidence 888877766554 344445568899999999999999999999 555543 345543
No 215
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=6.6e-38 Score=369.74 Aligned_cols=277 Identities=18% Similarity=0.233 Sum_probs=220.8
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCC-CCcceEEEEEEeCCeEE
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH-PFVPALYASFQTKTHVC 745 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h-pnIv~l~~~~~~~~~~~ 745 (1002)
..++|++++.||+|+||.||+|.+..+++.||||++..... ...+..|+.+++.|.| ++|+.+..++...+..|
T Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~ 79 (483)
T 3sv0_A 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNV 79 (483)
T ss_dssp ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-----SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEE
T ss_pred cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEE
Confidence 35789999999999999999999999999999998875432 1246789999999976 66777777778889999
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEE---ccCCcEEEEeccCCcccC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL---QGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl---~~~g~vkL~DFG~a~~~~ 822 (1002)
|||||+ +++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||| +.++.+||+|||++....
T Consensus 80 lvme~~-g~sL~~ll~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (483)
T 3sv0_A 80 LVMDLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR 157 (483)
T ss_dssp EEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEEECC-CCCHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence 999999 99999999754 2459999999999999999999999999999999999999 578999999999997653
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 902 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~ 902 (1002)
..... ...+.......+||+.|+|||++.+..++.++|||||||+||+|++|+.||.+..
T Consensus 158 ~~~~~--------------------~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~ 217 (483)
T 3sv0_A 158 DTSTH--------------------QHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLK 217 (483)
T ss_dssp CTTTC--------------------CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred CCccc--------------------cccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccc
Confidence 22110 0111223346789999999999999999999999999999999999999998743
Q ss_pred h---HHHHHHHHhCCCCCC---CCCCCCHHHHHHHHHccccCcCCCCCChhc---HHHH---HcCCCcCCCChhhhhccC
Q 001869 903 R---QKTFANILHKDLKFP---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEG---ANEI---KKHPFFKGVNWALVRCMN 970 (1002)
Q Consensus 903 ~---~~~~~~i~~~~~~~~---~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~---a~el---L~Hp~f~~~~~~~~~~~~ 970 (1002)
. ...+..+........ ....++.++.+||.+||+.||.+||++.+. ++++ ..++|+..++|..+....
T Consensus 218 ~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~~~~~~~~dW~~~~~~~ 297 (483)
T 3sv0_A 218 AGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGFQFDYVFDWTILKYQQ 297 (483)
T ss_dssp CSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCSSCCHHHHHTC--
T ss_pred chhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcCCCccCCcCchhhcccc
Confidence 3 344444433221111 113468899999999999999999996543 2223 458999999999885543
No 216
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=4.4e-38 Score=347.79 Aligned_cols=272 Identities=18% Similarity=0.223 Sum_probs=208.6
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEE-EEEeCCeEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYA-SFQTKTHVCL 746 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~-~~~~~~~~~l 746 (1002)
.++|++.+.||+|+||.||+|.+..+++.||||++..... ...+.+|+.+++.+.|++++..+. ++...+..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 4hgt_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC--------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-----chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEE
Confidence 4689999999999999999999999999999998765422 235678999999998877665555 4467888999
Q ss_pred EEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEE---ccCCcEEEEeccCCcccCC
Q 001869 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL---QGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl---~~~g~vkL~DFG~a~~~~~ 823 (1002)
||||+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 83 v~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 83 VMELL-GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp EEECC-CCBHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred EEEcc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 99999 99999999754 2459999999999999999999999999999999999999 7889999999999976432
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCCh
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 903 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~ 903 (1002)
.... ...+........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.
T Consensus 161 ~~~~--------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 220 (296)
T 4hgt_A 161 ARTH--------------------QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKA 220 (296)
T ss_dssp TTTC--------------------CBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCC
T ss_pred cccC--------------------ccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccch
Confidence 2110 00111233456899999999999999999999999999999999999999976432
Q ss_pred ---HHHHHHHHhCCCCCCC---CCCCCHHHHHHHHHccccCcCCCCCChhcHH---HHH---cCCCcCCCChhhh
Q 001869 904 ---QKTFANILHKDLKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGAN---EIK---KHPFFKGVNWALV 966 (1002)
Q Consensus 904 ---~~~~~~i~~~~~~~~~---~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~---elL---~Hp~f~~~~~~~~ 966 (1002)
...+..+.......+. ...++..+.+||.+||+.||.+|||+.+.++ +++ ...|-..++|+.+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~~~~~~dw~~~ 295 (296)
T 4hgt_A 221 ATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNML 295 (296)
T ss_dssp SSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCCTTCCCGGGGC
T ss_pred hhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCCccCccchhhc
Confidence 1233333332222221 1346889999999999999999999543322 121 2566666777654
No 217
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=5.9e-39 Score=366.76 Aligned_cols=278 Identities=16% Similarity=0.160 Sum_probs=206.1
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCC-----CeEEEEEEeecccccChhHH--------HHHHHHHHHHHhCCCCCcce
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKV--------HRACAEREILDMLDHPFVPA 733 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~-----~~~vaiK~~~~~~~~~~~~~--------~~~~~E~~il~~l~hpnIv~ 733 (1002)
..++|++++.||+|+||.||+|.+..+ ++.||||++........... ..+..|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 356899999999999999999999664 58899999876421111111 12234555667778999999
Q ss_pred EEEEEEeC----CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEc--cC
Q 001869 734 LYASFQTK----THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ--GN 807 (1002)
Q Consensus 734 l~~~~~~~----~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~--~~ 807 (1002)
+++++... .+.|+||||| |++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++ .+
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~ 190 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN-AKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNP 190 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCT
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCC
Confidence 99998764 5689999999 99999999864 35699999999999999999999999999999999999999 88
Q ss_pred CcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHH
Q 001869 808 GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGIL 887 (1002)
Q Consensus 808 g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvi 887 (1002)
+.+||+|||++.......... ..........+||+.|+|||++.+..++.++|||||||+
T Consensus 191 ~~~kl~DFG~a~~~~~~~~~~--------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~ 250 (364)
T 3op5_A 191 DQVYLVDYGLAYRYCPEGVHK--------------------AYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYC 250 (364)
T ss_dssp TCEEECCCTTCEESSGGGCCC--------------------CSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred CeEEEEECCcceecccCCccc--------------------ccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHH
Confidence 999999999997653211100 001112245679999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCChHHHHHHHHh----CCC------CCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHH---HHH-
Q 001869 888 LYEMLYGYTPFRGKTRQKTFANILH----KDL------KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN---EIK- 953 (1002)
Q Consensus 888 l~elltG~~Pf~~~~~~~~~~~i~~----~~~------~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~---elL- 953 (1002)
+|+|++|..||.+......+..... ..+ .+ ....++.++.+||..||+.||.+||++.+..+ +++
T Consensus 251 l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~ 329 (364)
T 3op5_A 251 MIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCF-PAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLK 329 (364)
T ss_dssp HHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHS-CTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhc-ccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Confidence 9999999999986322222111111 000 01 11346889999999999999999999654322 222
Q ss_pred --cCCCcCCCChhhhh
Q 001869 954 --KHPFFKGVNWALVR 967 (1002)
Q Consensus 954 --~Hp~f~~~~~~~~~ 967 (1002)
..++...++|....
T Consensus 330 ~~~~~~~~~~dw~~~~ 345 (364)
T 3op5_A 330 AIGSKDDGKLDLSVVE 345 (364)
T ss_dssp HTTCCCCCCCCC----
T ss_pred HcCCCcCCccceEecc
Confidence 35667777887653
No 218
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=2.8e-38 Score=347.19 Aligned_cols=247 Identities=23% Similarity=0.350 Sum_probs=208.8
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe-------
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------- 740 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------- 740 (1002)
..+|++++.||+|+||.||+|.+..+++.||+|.+.... ..+.+|+.+++.++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPET 82 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccc
Confidence 357999999999999999999999999999999987542 245679999999999999999998864
Q ss_pred ---------CCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEE
Q 001869 741 ---------KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 811 (1002)
Q Consensus 741 ---------~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vk 811 (1002)
...+|+||||+++++|.+++.......+++..++.++.||+.||.|||++||+|+||||+|||++.++.+|
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~k 162 (284)
T 2a19_B 83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVK 162 (284)
T ss_dssp ------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEE
T ss_pred ccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEE
Confidence 45689999999999999999865556799999999999999999999999999999999999999999999
Q ss_pred EEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHH
Q 001869 812 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 891 (1002)
Q Consensus 812 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~el 891 (1002)
|+|||++...... .......||+.|+|||++.+..++.++|||||||++|+|
T Consensus 163 l~Dfg~~~~~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 214 (284)
T 2a19_B 163 IGDFGLVTSLKND----------------------------GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 214 (284)
T ss_dssp ECCCTTCEESSCC----------------------------SCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHH
T ss_pred ECcchhheecccc----------------------------ccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHH
Confidence 9999998654311 011234699999999999999999999999999999999
Q ss_pred HcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcC
Q 001869 892 LYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 959 (1002)
Q Consensus 892 ltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 959 (1002)
++|..||... ......+....+ ...++..+.+||.+||+.||.+||| +.++++|.+.-
T Consensus 215 ~~~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps----~~e~l~~l~~~ 272 (284)
T 2a19_B 215 LHVCDTAFET--SKFFTDLRDGII----SDIFDKKEKTLLQKLLSKKPEDRPN----TSEILRTLTVW 272 (284)
T ss_dssp HSCCSSHHHH--HHHHHHHHTTCC----CTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHHHHHHH
T ss_pred HhcCCcchhH--HHHHHHhhcccc----cccCCHHHHHHHHHHccCChhhCcC----HHHHHHHHHHH
Confidence 9999988532 223333333322 2346889999999999999999999 89999887654
No 219
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=355.76 Aligned_cols=265 Identities=25% Similarity=0.380 Sum_probs=208.6
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEE----eC
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ----TK 741 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~----~~ 741 (1002)
+..++|++++.||+|+||.||+|.+..+++.||||++... .......+.+|+.+++.++||||+++++++. ..
T Consensus 26 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 102 (317)
T 2buj_A 26 IDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH---EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAK 102 (317)
T ss_dssp ETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTE
T ss_pred ECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC---CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCC
Confidence 4567899999999999999999999999999999998653 4456678889999999999999999999987 34
Q ss_pred CeEEEEEecCCCCcHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCc
Q 001869 742 THVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~ 819 (1002)
...|+||||+.+++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus 103 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~ 182 (317)
T 2buj_A 103 HEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMN 182 (317)
T ss_dssp EEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCE
T ss_pred ceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcch
Confidence 5789999999999999998752 34569999999999999999999999999999999999999999999999999885
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCC---CCChhhHHHHHHHHHHHHcCCC
Q 001869 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG---HTSAVDWWALGILLYEMLYGYT 896 (1002)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~---~~~~sDIwSlGvil~elltG~~ 896 (1002)
........ . .. ...........||+.|+|||++.+.. ++.++|||||||++|+|++|..
T Consensus 183 ~~~~~~~~----~-~~-------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~ 244 (317)
T 2buj_A 183 QACIHVEG----S-RQ-------------ALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEG 244 (317)
T ss_dssp ESCEEEES----H-HH-------------HHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSC
T ss_pred hccccccc----c-cc-------------cccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCC
Confidence 43211000 0 00 00000112346899999999987654 6889999999999999999999
Q ss_pred CCCCCCh-HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 897 PFRGKTR-QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 897 Pf~~~~~-~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
||..... .............++....++..+.+||.+||+.||.+||| +.++++|
T Consensus 245 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~~ 300 (317)
T 2buj_A 245 PYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPH----IPLLLSQ 300 (317)
T ss_dssp TTHHHHHTTSCHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred ChhhhhcccchhhHHhhccCCCCccccCCHHHHHHHHHHhhcChhhCCC----HHHHHHH
Confidence 9953110 01122233345556666678999999999999999999999 7777664
No 220
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.3e-37 Score=344.99 Aligned_cols=253 Identities=19% Similarity=0.228 Sum_probs=206.2
Q ss_pred cCCcccccccccCCcEEEEEEEEcCC---CeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEE-EeCCe
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASF-QTKTH 743 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~-~~~~~ 743 (1002)
...|++.+.||+|+||.||+|.+..+ +..+|+|.+... ........+.+|+.++++++||||+++++++ ...+.
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 101 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS 101 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC--CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSC
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC--CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCc
Confidence 35799999999999999999997543 446899998753 3455667889999999999999999999985 45678
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCC
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~ 823 (1002)
.|+||||+.+++|.+++... ...++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 102 ~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 102 PLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp CEEEEECCTTCBHHHHHHCT-TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred eEEEEeCCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccc
Confidence 89999999999999999754 35689999999999999999999999999999999999999999999999999965432
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCC
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 902 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~ 902 (1002)
... ..........||+.|+|||++.+..++.++|||||||++|+|++ |.+||.+.+
T Consensus 181 ~~~-----------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~ 237 (298)
T 3f66_A 181 KEY-----------------------YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 237 (298)
T ss_dssp GGG-----------------------CBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSC
T ss_pred cch-----------------------hccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCC
Confidence 110 01112234568899999999999999999999999999999999 777787777
Q ss_pred hHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001869 903 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 903 ~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
.......+...... .....++..+.+||.+||+.||.+|||+.+
T Consensus 238 ~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps~~e 281 (298)
T 3f66_A 238 TFDITVYLLQGRRL-LQPEYCPDPLYEVMLKCWHPKAEMRPSFSE 281 (298)
T ss_dssp TTTHHHHHHTTCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred HHHHHHHHhcCCCC-CCCccCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 66666666655433 233457889999999999999999999433
No 221
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=5.9e-38 Score=347.85 Aligned_cols=251 Identities=27% Similarity=0.380 Sum_probs=197.8
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHh--CCCCCcceEEEEEEe---
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDM--LDHPFVPALYASFQT--- 740 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~--l~hpnIv~l~~~~~~--- 740 (1002)
+..++|++++.||+|+||.||+|.+ +++.||||++... ....+..|.+++.. ++||||+++++++..
T Consensus 5 ~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~ 76 (301)
T 3q4u_A 5 TVARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR------DEKSWFRETELYNTVMLRHENILGFIASDMTSRH 76 (301)
T ss_dssp CCGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG------GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEET
T ss_pred cccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc------cchhhHHHHHHHHHhhccCcCeeeEEEeeccccC
Confidence 3457899999999999999999988 7899999998643 23455667777777 799999999998654
Q ss_pred -CCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH--------HcCcccCCCCCCCEEEccCCcEE
Q 001869 741 -KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH--------CQGIIYRDLKPENVLLQGNGHVS 811 (1002)
Q Consensus 741 -~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH--------~~gIiHrDLKP~NILl~~~g~vk 811 (1002)
...+|+||||+++|+|.++++. ..+++..+..++.||+.||+||| ++||+||||||+|||++.++.+|
T Consensus 77 ~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~k 153 (301)
T 3q4u_A 77 SSTQLWLITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCC 153 (301)
T ss_dssp TEEEEEEEECCCTTCBHHHHHTT---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEE
T ss_pred CCceeEEehhhccCCCHHHHHhh---cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEE
Confidence 3568999999999999999964 35999999999999999999999 99999999999999999999999
Q ss_pred EEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC------CCCChhhHHHHH
Q 001869 812 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA------GHTSAVDWWALG 885 (1002)
Q Consensus 812 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~------~~~~~sDIwSlG 885 (1002)
|+|||++......... .........||+.|+|||++.+. .++.++||||||
T Consensus 154 l~Dfg~a~~~~~~~~~-----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG 210 (301)
T 3q4u_A 154 IADLGLAVMHSQSTNQ-----------------------LDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFG 210 (301)
T ss_dssp ECCCTTCEEEETTTTE-----------------------EECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHH
T ss_pred EeeCCCeeeccccccc-----------------------ccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHH
Confidence 9999998654321110 00112345799999999999876 445689999999
Q ss_pred HHHHHHHcC----------CCCCCCC----ChHHHHHHHHhCCCCCCCC------CCCCHHHHHHHHHccccCcCCCCCC
Q 001869 886 ILLYEMLYG----------YTPFRGK----TRQKTFANILHKDLKFPSS------TPTSLHAKQLMYRLLHRDPKSRLGS 945 (1002)
Q Consensus 886 vil~elltG----------~~Pf~~~----~~~~~~~~i~~~~~~~~~~------~~~s~~~~~Ll~~~L~~dP~~Rpt~ 945 (1002)
|++|+|++| ..||.+. .....+..........+.. ..++..+.+||.+||+.||.+|||
T Consensus 211 ~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps- 289 (301)
T 3q4u_A 211 LVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLT- 289 (301)
T ss_dssp HHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCC-
T ss_pred HHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCC-
Confidence 999999999 8898653 2233444444332222221 124567999999999999999999
Q ss_pred hhcHHHHHc
Q 001869 946 HEGANEIKK 954 (1002)
Q Consensus 946 ~~~a~elL~ 954 (1002)
+.++++
T Consensus 290 ---~~~i~~ 295 (301)
T 3q4u_A 290 ---ALRIKK 295 (301)
T ss_dssp ---HHHHHH
T ss_pred ---HHHHHH
Confidence 555553
No 222
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=369.71 Aligned_cols=260 Identities=22% Similarity=0.342 Sum_probs=200.0
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 744 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 744 (1002)
+...+|.+.+.||+|+||.||. ....+++.||||++..... ..+.+|+.+++.+ +||||+++++++.+...+
T Consensus 21 i~~~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~ 93 (432)
T 3p23_A 21 VGKISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECF------SFADREVQLLRESDEHPNVIRYFCTEKDRQFQ 93 (432)
T ss_dssp ETTEEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTTE------EECHHHHHHHHHSCCCTTBCCEEEEEEETTEE
T ss_pred EccEEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHHH------HHHHHHHHHHHhccCCCCcCeEEEEEecCCEE
Confidence 3345799999999999999764 3446889999999875432 2245799999999 799999999999999999
Q ss_pred EEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEcc---C--CcEEEEeccCCc
Q 001869 745 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---N--GHVSLTDFDLSC 819 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~---~--g~vkL~DFG~a~ 819 (1002)
|+||||| +|+|.+++.... ..++...+..++.||+.||.|||++||+||||||+|||++. + ..+||+|||++.
T Consensus 94 ~lv~E~~-~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~ 171 (432)
T 3p23_A 94 YIAIELC-AATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK 171 (432)
T ss_dssp EEEEECC-SEEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEE
T ss_pred EEEEECC-CCCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEeccccee
Confidence 9999999 569999997653 33555567789999999999999999999999999999953 2 358899999996
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCccccccccc---CCCCCChhhHHHHHHHHHHHHc-CC
Q 001869 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLY-GY 895 (1002)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~~~~sDIwSlGvil~ellt-G~ 895 (1002)
....... ........+||+.|+|||++. ...++.++|||||||++|+|++ |.
T Consensus 172 ~~~~~~~------------------------~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~ 227 (432)
T 3p23_A 172 KLAVGRH------------------------SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGS 227 (432)
T ss_dssp CC------------------------------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSC
T ss_pred eccCCCc------------------------ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCC
Confidence 5432110 011223467999999999997 4566779999999999999999 99
Q ss_pred CCCCCCChHHHHHHHHhCCCCCCC---CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCCChh
Q 001869 896 TPFRGKTRQKTFANILHKDLKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 964 (1002)
Q Consensus 896 ~Pf~~~~~~~~~~~i~~~~~~~~~---~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~ 964 (1002)
.||......... +......... ....+..+.+||.+||+.||.+||| +.++++||||..++|.
T Consensus 228 ~pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps----~~evl~hp~f~~~~~~ 293 (432)
T 3p23_A 228 HPFGKSLQRQAN--ILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPS----AKHVLKHPFFWSLEKQ 293 (432)
T ss_dssp BTTBSTTTHHHH--HHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCC----HHHHHTSTTTCCHHHH
T ss_pred CCcchhhHHHHH--HHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCC----HHHHHhCccccChHHH
Confidence 999665544332 2222222211 1223556889999999999999999 9999999999998874
No 223
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.7e-38 Score=359.52 Aligned_cols=252 Identities=17% Similarity=0.208 Sum_probs=201.7
Q ss_pred cCCcccccccccCCcEEEEEEEEcC--------CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcce------
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCG--------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPA------ 733 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~--------~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~------ 733 (1002)
.++|++.+.||+|+||.||+|.+.. .++.||||++... ..+.+|+.+++.++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------~~~~~E~~~l~~l~h~niv~~~~~~~ 112 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------GRLFNEQNFFQRAAKPLQVNKWKKLY 112 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--------STHHHHHHHHHHHCCHHHHHHHHHHT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--------chHHHHHHHHHHhcccchhhhhhhhc
Confidence 4799999999999999999999987 4889999998754 35778999999999998887
Q ss_pred ---------EEEEEEe-CCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEE
Q 001869 734 ---------LYASFQT-KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVL 803 (1002)
Q Consensus 734 ---------l~~~~~~-~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NIL 803 (1002)
+++++.. ....|+||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||
T Consensus 113 ~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl 191 (352)
T 2jii_A 113 STPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIF 191 (352)
T ss_dssp TCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEE
T ss_pred cCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEE
Confidence 6777765 78899999999 999999998754466999999999999999999999999999999999999
Q ss_pred EccCC--cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhH
Q 001869 804 LQGNG--HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 881 (1002)
Q Consensus 804 l~~~g--~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDI 881 (1002)
++.++ .+||+|||++.......... ...........||+.|+|||++.+..++.++||
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~--------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di 251 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHV--------------------AYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDL 251 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCC--------------------CCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHH
T ss_pred EcCCCCceEEEecCcceeeccCCCccc--------------------cccccccccccCCccccCHHHHccCCCCchhhH
Confidence 99988 89999999996643211100 001112234589999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCCCCC--hHHHHHHH---HhCCCCCCCC----CCCCHHHHHHHHHccccCcCCCCCChhc
Q 001869 882 WALGILLYEMLYGYTPFRGKT--RQKTFANI---LHKDLKFPSS----TPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 882 wSlGvil~elltG~~Pf~~~~--~~~~~~~i---~~~~~~~~~~----~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
|||||++|+|++|..||.+.. ........ ......++.. ..++..+.+||.+||+.||.+|||+.+.
T Consensus 252 ~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 327 (352)
T 2jii_A 252 QSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAML 327 (352)
T ss_dssp HHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHH
T ss_pred HHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHH
Confidence 999999999999999998753 22222222 2222222221 2468899999999999999999995443
No 224
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=6.6e-38 Score=351.12 Aligned_cols=255 Identities=23% Similarity=0.328 Sum_probs=207.7
Q ss_pred cccCCcccccccccCCcEEEEEEEE----cCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe-
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVEL----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT- 740 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~----~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~- 740 (1002)
+....|++++.||+|+||.||++.. ..+++.||||++... ........+.+|+.+++.++||||+++++++.+
T Consensus 28 ~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 105 (318)
T 3lxp_A 28 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD--AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDA 105 (318)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT--CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred ecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc--cChHHHHHHHHHHHHHHhCCCcchhhEEEEEecC
Confidence 3333449999999999999988754 457899999999864 244556788999999999999999999999987
Q ss_pred -CCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCc
Q 001869 741 -KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (1002)
Q Consensus 741 -~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~ 819 (1002)
...+|+||||+++++|.+++... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus 106 ~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 182 (318)
T 3lxp_A 106 GAASLQLVMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAK 182 (318)
T ss_dssp TTTEEEEEECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred CCceEEEEEecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCccccc
Confidence 46889999999999999999764 38999999999999999999999999999999999999999999999999996
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCC
Q 001869 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 899 (1002)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~ 899 (1002)
....... .........||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus 183 ~~~~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~ 238 (318)
T 3lxp_A 183 AVPEGHE------------------------YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQ 238 (318)
T ss_dssp ECCTTCS------------------------EEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred ccccccc------------------------ccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCccc
Confidence 6432110 0011234468889999999999889999999999999999999999996
Q ss_pred CCChH--------------HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001869 900 GKTRQ--------------KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 900 ~~~~~--------------~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
..... ..+...+......+....++..+.+||.+||+.||.+||| +.+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps----~~ell 302 (318)
T 3lxp_A 239 SPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPT----FENLI 302 (318)
T ss_dssp SHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHH
T ss_pred ccchhhhhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcC----HHHHH
Confidence 53221 1223334444555556678999999999999999999999 55555
No 225
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.8e-38 Score=363.41 Aligned_cols=251 Identities=25% Similarity=0.410 Sum_probs=205.0
Q ss_pred ccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC--eE
Q 001869 667 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT--HV 744 (1002)
Q Consensus 667 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~~ 744 (1002)
..++|++.+.||+|+||.||+|.+..+++.||||++..... ......+.+|+.+++.++||||+++++++...+ ..
T Consensus 7 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 84 (396)
T 4eut_A 7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHK 84 (396)
T ss_dssp SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG--GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCE
T ss_pred CCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCee
Confidence 35789999999999999999999999999999999976432 223566788999999999999999999998755 78
Q ss_pred EEEEecCCCCcHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEE----ccCCcEEEEeccCCc
Q 001869 745 CLITDYCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL----QGNGHVSLTDFDLSC 819 (1002)
Q Consensus 745 ~lV~E~~~ggsL~~~l~~~~-~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl----~~~g~vkL~DFG~a~ 819 (1002)
|+|||||+|++|.+++.... ...+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||++.
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp EEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 99999999999999997542 2239999999999999999999999999999999999999 677789999999996
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC--------CCCCChhhHHHHHHHHHHH
Q 001869 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--------AGHTSAVDWWALGILLYEM 891 (1002)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~--------~~~~~~sDIwSlGvil~el 891 (1002)
..... ......+||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 165 ~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el 216 (396)
T 4eut_A 165 ELEDD----------------------------EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHA 216 (396)
T ss_dssp ECCCG----------------------------GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHH
T ss_pred EccCC----------------------------CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHH
Confidence 54211 11224579999999999865 4567799999999999999
Q ss_pred HcCCCCCCC----CChHHHHHHHHhCCCC-------------------CCCCC----CCCHHHHHHHHHccccCcCCCCC
Q 001869 892 LYGYTPFRG----KTRQKTFANILHKDLK-------------------FPSST----PTSLHAKQLMYRLLHRDPKSRLG 944 (1002)
Q Consensus 892 ltG~~Pf~~----~~~~~~~~~i~~~~~~-------------------~~~~~----~~s~~~~~Ll~~~L~~dP~~Rpt 944 (1002)
++|+.||.+ ....+.+..++.+... ++... .++..+.+||.+||..||.+||+
T Consensus 217 ~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s 296 (396)
T 4eut_A 217 ATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWG 296 (396)
T ss_dssp HHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCC
T ss_pred HHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhcc
Confidence 999999964 3344556666654321 11111 23456789999999999999999
Q ss_pred Chh
Q 001869 945 SHE 947 (1002)
Q Consensus 945 ~~~ 947 (1002)
+.+
T Consensus 297 ~~e 299 (396)
T 4eut_A 297 FDQ 299 (396)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 226
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=8.1e-38 Score=365.80 Aligned_cols=257 Identities=25% Similarity=0.337 Sum_probs=197.6
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~l 746 (1002)
.+.|.+.+.||+|+||+||.+. ..+|+.||||.+... ....+.+|+.+++.+ +||||+++++++.+.+.+|+
T Consensus 14 ~~~~~~~~~LG~G~~g~V~~~~-~~~g~~vAvK~~~~~------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~l 86 (434)
T 2rio_A 14 KNLVVSEKILGYGSSGTVVFQG-SFQGRPVAVKRMLID------FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYI 86 (434)
T ss_dssp SSCEEEEEEEEECSTTCEEEEE-ESSSSEEEEEEEEGG------GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred hheeeccCeEeeCCCeEEEEEE-EECCeEEEEEEEcHH------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEE
Confidence 3567778999999999998754 467999999998653 234567899999876 89999999999999999999
Q ss_pred EEecCCCCcHHHHHhhCCCCC-----CCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccC-------------C
Q 001869 747 ITDYCPGGELFLLLDRQPTKV-----LKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-------------G 808 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~-----l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~-------------g 808 (1002)
||||| +|+|.+++....... .++..++.++.||+.||+|||++||+||||||+|||++.+ +
T Consensus 87 v~E~~-~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~ 165 (434)
T 2rio_A 87 ALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENL 165 (434)
T ss_dssp EECCC-SEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSC
T ss_pred EEecC-CCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCce
Confidence 99999 569999997643211 1223456799999999999999999999999999999754 4
Q ss_pred cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-------CCCCChhhH
Q 001869 809 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-------AGHTSAVDW 881 (1002)
Q Consensus 809 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-------~~~~~~sDI 881 (1002)
.+||+|||++.......... .......+||+.|+|||++.+ ..++.++||
T Consensus 166 ~~kL~DFG~a~~~~~~~~~~-----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~Di 222 (434)
T 2rio_A 166 RILISDFGLCKKLDSGQSSF-----------------------RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDI 222 (434)
T ss_dssp EEEECCCTTCEECCC-------------------------------------CCTTSCHHHHSCCCTTSCCCCCCTHHHH
T ss_pred EEEEcccccceecCCCCccc-----------------------eeeecCCCCCCCccCHHHhccccccccccCcchhhhh
Confidence 89999999997643211100 001234579999999999976 568889999
Q ss_pred HHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCC-----CCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 882 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSST-----PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 882 wSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~-----~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
|||||++|+|++ |..||.+..... ..++.....++... .++.++.+||.+||+.||.+||| +.++++|
T Consensus 223 wSlG~il~ellt~g~~Pf~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps----~~eil~h 296 (434)
T 2rio_A 223 FSMGCVFYYILSKGKHPFGDKYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPT----AMKVLRH 296 (434)
T ss_dssp HHHHHHHHHHHTTSCCTTCSTTTHH--HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCC----HHHHHTS
T ss_pred HhHHHHHHHHHhCCCCCCCCchhhH--HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCC----HHHHHhC
Confidence 999999999998 999997765443 34555544443321 23578999999999999999999 9999999
Q ss_pred CCcCCC
Q 001869 956 PFFKGV 961 (1002)
Q Consensus 956 p~f~~~ 961 (1002)
|||...
T Consensus 297 p~f~~~ 302 (434)
T 2rio_A 297 PLFWPK 302 (434)
T ss_dssp GGGSCH
T ss_pred CccCCc
Confidence 999763
No 227
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=6.3e-39 Score=360.39 Aligned_cols=260 Identities=23% Similarity=0.253 Sum_probs=205.1
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
+..++|++.+.||+|+||.||+|.+ .+++.||||++...... .....+.+|+.+++.++||||+++++++...+..+
T Consensus 27 ~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 103 (326)
T 3uim_A 27 VASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQ--GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 103 (326)
T ss_dssp TTTTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC-------CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCE
T ss_pred HHhhccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccCc--hHHHHHHHHHHHHHhccCCCccceEEEEecCCceE
Confidence 4567999999999999999999985 46899999998764321 12235788999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHc---CcccCCCCCCCEEEccCCcEEEEeccCCcc
Q 001869 746 LITDYCPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQ---GIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~--~~~l~~~~i~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
+||||+.+++|.+++.... ...+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||++..
T Consensus 104 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~ 183 (326)
T 3uim_A 104 LVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 183 (326)
T ss_dssp EEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred EEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccc
Confidence 9999999999999998643 23499999999999999999999999 999999999999999999999999999965
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001869 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
..... ........||+.|+|||++.+..++.++|||||||++|+|++|..||..
T Consensus 184 ~~~~~--------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 237 (326)
T 3uim_A 184 MDYKD--------------------------THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL 237 (326)
T ss_dssp CCSSS--------------------------SCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCH
T ss_pred cCccc--------------------------ccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccc
Confidence 43211 1112345699999999999888899999999999999999999999952
Q ss_pred ----CChHHHHHHHHhCCCC---C----------CCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCc
Q 001869 901 ----KTRQKTFANILHKDLK---F----------PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 958 (1002)
Q Consensus 901 ----~~~~~~~~~i~~~~~~---~----------~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 958 (1002)
..........+..... . ......+..+.+|+.+||+.||.+||| +.++++|-.-
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps----~~ell~~L~~ 308 (326)
T 3uim_A 238 ARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPK----MSEVVRMLEG 308 (326)
T ss_dssp HHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCC----HHHHHHHHHT
T ss_pred cccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCC----HHHHHHHhcC
Confidence 1111111122221110 0 001112357899999999999999999 7777766543
No 228
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=7.6e-38 Score=347.41 Aligned_cols=233 Identities=25% Similarity=0.452 Sum_probs=192.5
Q ss_pred cCCcccc-cccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHH-HhCCCCCcceEEEEEEe----C
Q 001869 668 LQHFRPI-KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREIL-DMLDHPFVPALYASFQT----K 741 (1002)
Q Consensus 668 ~~~y~i~-~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il-~~l~hpnIv~l~~~~~~----~ 741 (1002)
.++|.++ +.||+|+||.||+|.+..+++.||+|++... ..+.+|+.++ +.++||||+++++++.. .
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~ 87 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAGR 87 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc--------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCC
Confidence 4678888 7899999999999999999999999998643 3566788887 66699999999999987 7
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEcc---CCcEEEEeccCC
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLS 818 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~---~g~vkL~DFG~a 818 (1002)
..+|+||||++|++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++. ++.+||+|||++
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 88 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred ceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 78999999999999999998876667999999999999999999999999999999999999998 789999999988
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCC
Q 001869 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
.... +..++.++|||||||++|+|++|..||
T Consensus 168 ~~~~-------------------------------------------------~~~~~~~~DiwslG~il~el~tg~~pf 198 (299)
T 3m2w_A 168 KETT-------------------------------------------------GEKYDKSCDMWSLGVIMYILLCGYPPF 198 (299)
T ss_dssp EECT-------------------------------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSC
T ss_pred cccc-------------------------------------------------cccCCchhhHHHHHHHHHHHHHCCCCC
Confidence 4321 133567899999999999999999999
Q ss_pred CCCChHHHHHHHHh----CCCCCCC--CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcCCC
Q 001869 899 RGKTRQKTFANILH----KDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 961 (1002)
Q Consensus 899 ~~~~~~~~~~~i~~----~~~~~~~--~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 961 (1002)
.+.........+.. ....++. ...++.++.+||.+||+.||.+||| +.++++||||+..
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps----~~e~l~hp~~~~~ 263 (299)
T 3m2w_A 199 YSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWIMQS 263 (299)
T ss_dssp CC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCC----HHHHHTSHHHHTG
T ss_pred CCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCC----HHHHhcChhhccc
Confidence 87654433211111 1111111 1457889999999999999999999 9999999999873
No 229
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.4e-37 Score=343.84 Aligned_cols=253 Identities=19% Similarity=0.228 Sum_probs=202.6
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEE-EEEeCCeEEE
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYA-SFQTKTHVCL 746 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~-~~~~~~~~~l 746 (1002)
.++|++.+.||+|+||.||+|.+..+++.||||++..... ...+.+|+.+++.+.|++++..+. ++...+..|+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-----hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEE
Confidence 4789999999999999999999999999999999875432 235778999999998877655544 4467788999
Q ss_pred EEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEE---ccCCcEEEEeccCCcccCC
Q 001869 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL---QGNGHVSLTDFDLSCLTSC 823 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl---~~~g~vkL~DFG~a~~~~~ 823 (1002)
||||+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 83 v~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 83 VMELL-GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp EEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred EEEec-CCCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 99999 99999999754 2469999999999999999999999999999999999999 4789999999999976432
Q ss_pred CCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCC-
Q 001869 824 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT- 902 (1002)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~- 902 (1002)
.... ...+........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+..
T Consensus 161 ~~~~--------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 220 (296)
T 3uzp_A 161 ARTH--------------------QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKA 220 (296)
T ss_dssp TTTC--------------------CBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCC
T ss_pred cccc--------------------cccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCc
Confidence 2110 0011122345689999999999999999999999999999999999999997632
Q ss_pred --hHHHHHHHHhCCCCCC---CCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001869 903 --RQKTFANILHKDLKFP---SSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 903 --~~~~~~~i~~~~~~~~---~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
....+..+.......+ ....++..+.+||.+||+.||.+|||+.+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ 270 (296)
T 3uzp_A 221 ATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSY 270 (296)
T ss_dssp SSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHH
T ss_pred hhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHH
Confidence 2233333333222222 11346889999999999999999999543
No 230
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=7.2e-38 Score=352.61 Aligned_cols=265 Identities=25% Similarity=0.358 Sum_probs=192.5
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCcceEEEEEE----
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQ---- 739 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~---- 739 (1002)
.+...+|++.+.||+|+||.||+|.+..+++.||||++... .......+.+|+.+++.+. ||||+++++++.
T Consensus 24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~ 100 (337)
T 3ll6_A 24 ELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN---EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKE 100 (337)
T ss_dssp EETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTT
T ss_pred eccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC---chHHHHHHHHHHHHHHHhccCCChhhcccccccccc
Confidence 34556899999999999999999999999999999998654 3455667889999999995 999999999984
Q ss_pred ----eCCeEEEEEecCCCCcHHHHHhh-CCCCCCCHHHHHHHHHHHHHHHHHHHHcC--cccCCCCCCCEEEccCCcEEE
Q 001869 740 ----TKTHVCLITDYCPGGELFLLLDR-QPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSL 812 (1002)
Q Consensus 740 ----~~~~~~lV~E~~~ggsL~~~l~~-~~~~~l~~~~i~~i~~qil~aL~yLH~~g--IiHrDLKP~NILl~~~g~vkL 812 (1002)
....+++||||+ +|+|.+++.. .....+++..++.++.||+.||.|||++| |+||||||+|||++.++.+||
T Consensus 101 ~~~~~~~~~~lv~e~~-~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl 179 (337)
T 3ll6_A 101 ESDTGQAEFLLLTELC-KGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKL 179 (337)
T ss_dssp TSTTSSEEEEEEEECC-SEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEB
T ss_pred ccccCCceEEEEEEec-CCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEE
Confidence 345689999999 5799998864 23356999999999999999999999999 999999999999999999999
Q ss_pred EeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccc---cCCCCCChhhHHHHHHHHH
Q 001869 813 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII---AGAGHTSAVDWWALGILLY 889 (1002)
Q Consensus 813 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l---~~~~~~~~sDIwSlGvil~ 889 (1002)
+|||++.............. ............||+.|+|||++ .+..++.++|||||||++|
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~ 244 (337)
T 3ll6_A 180 CDFGSATTISHYPDYSWSAQ---------------RRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILY 244 (337)
T ss_dssp CCCTTCBCCSSCC----------------------------------------------CCTTSCSSHHHHHHHHHHHHH
T ss_pred ecCccceeccccCccccccc---------------ccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHH
Confidence 99999976543211100000 00001122345799999999998 5667888999999999999
Q ss_pred HHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCC
Q 001869 890 EMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHP 956 (1002)
Q Consensus 890 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp 956 (1002)
+|++|..||.+..... +.......+.....+..+.+||.+||+.||.+||| +.++++|-
T Consensus 245 el~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~e~l~~l 303 (337)
T 3ll6_A 245 LLCFRQHPFEDGAKLR----IVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLS----IAEVVHQL 303 (337)
T ss_dssp HHHHSSCCC----------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCC----HHHHHHHH
T ss_pred HHHhCCCCCcchhHHH----hhcCcccCCcccccchHHHHHHHHHccCChhhCcC----HHHHHHHH
Confidence 9999999997655433 33444455555567778999999999999999999 77777763
No 231
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=346.37 Aligned_cols=253 Identities=24% Similarity=0.434 Sum_probs=201.7
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 745 (1002)
+..++|++.+.||+|+||.||++.+ .++.||+|.+... .....+.+|+.++++++||||+++++++.+ ..|
T Consensus 5 i~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~ 75 (307)
T 2eva_A 5 IDYKEIEVEEVVGRGAFGVVCKAKW--RAKDVAIKQIESE-----SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVC 75 (307)
T ss_dssp CCGGGEEEEEEEECCSSSEEEEEEE--TTEEEEEEECSST-----THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTE
T ss_pred CCHhHeeeeeEeecCCCceEEEEEE--CCeeEEEEEecCh-----hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcE
Confidence 4567899999999999999999998 4789999998643 345678899999999999999999998764 479
Q ss_pred EEEecCCCCcHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHH---cCcccCCCCCCCEEEccCCc-EEEEeccCCcc
Q 001869 746 LITDYCPGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHC---QGIIYRDLKPENVLLQGNGH-VSLTDFDLSCL 820 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~-~~l~~~~i~~i~~qil~aL~yLH~---~gIiHrDLKP~NILl~~~g~-vkL~DFG~a~~ 820 (1002)
+||||+++++|.+++..... ..++...+..++.||+.||+|||+ +||+||||||+|||++.++. +||+|||++..
T Consensus 76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~ 155 (307)
T 2eva_A 76 LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD 155 (307)
T ss_dssp EEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---
T ss_pred EEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccc
Confidence 99999999999999976432 247899999999999999999999 89999999999999998886 79999999854
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001869 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||..
T Consensus 156 ~~~------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 205 (307)
T 2eva_A 156 IQT------------------------------HMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDE 205 (307)
T ss_dssp ---------------------------------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTT
T ss_pred ccc------------------------------ccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchh
Confidence 321 01123589999999999999999999999999999999999999975
Q ss_pred CCh--HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc-----CCCcCCCC
Q 001869 901 KTR--QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK-----HPFFKGVN 962 (1002)
Q Consensus 901 ~~~--~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~-----Hp~f~~~~ 962 (1002)
... ......+.. ....+....++..+.+||.+||+.||.+||| +.++++ .++|.+.+
T Consensus 206 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~~L~~~~~~~~~~~ 269 (307)
T 2eva_A 206 IGGPAFRIMWAVHN-GTRPPLIKNLPKPIESLMTRCWSKDPSQRPS----MEEIVKIMTHLMRYFPGAD 269 (307)
T ss_dssp TCSSHHHHHHHHHT-TCCCCCBTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHHHHHHGGGCCCTT
T ss_pred hCccHHHHHHHHhc-CCCCCcccccCHHHHHHHHHHhcCChhhCcC----HHHHHHHHHHHHHhccCCC
Confidence 432 222223332 2233334557889999999999999999999 555554 35555543
No 232
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=8.6e-38 Score=375.02 Aligned_cols=262 Identities=23% Similarity=0.351 Sum_probs=218.0
Q ss_pred cccccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001869 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
..+.+..++|++.+.||+|+||.||+|.+.. +..||||+++.... ....+.+|+.+|+.++||||+++++++..
T Consensus 260 ~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~~~~~~~~- 333 (535)
T 2h8h_A 260 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 333 (535)
T ss_dssp TCSBCCGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred cceecchhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCC----CHHHHHHHHHHHHhCCCCCEeeEEEEEee-
Confidence 3456778899999999999999999999965 46799999986432 24578899999999999999999999876
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
+.+|||||||.+|+|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++...
T Consensus 334 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 413 (535)
T 2h8h_A 334 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI 413 (535)
T ss_dssp SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTC
T ss_pred ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceec
Confidence 67899999999999999997643456899999999999999999999999999999999999999999999999999653
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~ 900 (1002)
.... ........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+
T Consensus 414 ~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~ 467 (535)
T 2h8h_A 414 EDNE--------------------------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 467 (535)
T ss_dssp CCHH--------------------------HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTT
T ss_pred CCCc--------------------------eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 2100 001123357889999999998889999999999999999999 9999999
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC--CCcCC
Q 001869 901 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH--PFFKG 960 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H--p~f~~ 960 (1002)
....+.+..+..+ ...+....++..+.+||.+||+.||++||| +.+|++. .+|..
T Consensus 468 ~~~~~~~~~i~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPt----~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 468 MVNREVLDQVERG-YRMPCPPECPESLHDLMCQCWRKEPEERPT----FEYLQAFLEDYFTS 524 (535)
T ss_dssp CCHHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHHHHTSSCC
T ss_pred CCHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcCCChhHCcC----HHHHHHHHHHHhhc
Confidence 8888877766544 344445568899999999999999999999 5555432 44443
No 233
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=4.4e-38 Score=356.81 Aligned_cols=259 Identities=17% Similarity=0.138 Sum_probs=196.9
Q ss_pred cccCCcccccccccCCcEEEEEEEEcC---CCeEEEEEEeecccccChh--------HHHHHHHHHHHHHhCCCCCcceE
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGVMLNRN--------KVHRACAEREILDMLDHPFVPAL 734 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~---~~~~vaiK~~~~~~~~~~~--------~~~~~~~E~~il~~l~hpnIv~l 734 (1002)
+..++|++.+.||+|+||.||+|.+.. ++..+|+|++......... ....+.+|+.+++.++||||+++
T Consensus 34 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~ 113 (345)
T 2v62_A 34 MEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLF 113 (345)
T ss_dssp TTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCE
T ss_pred ccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCccee
Confidence 345789999999999999999999987 7889999998764211111 11235578888999999999999
Q ss_pred EEEEEe----CCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCC--
Q 001869 735 YASFQT----KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-- 808 (1002)
Q Consensus 735 ~~~~~~----~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g-- 808 (1002)
++++.. ...+|+||||+ +++|.+++.... .+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 114 YGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTT
T ss_pred ecccccccCCCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCC
Confidence 999987 78899999999 999999997653 699999999999999999999999999999999999999877
Q ss_pred cEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHH
Q 001869 809 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 888 (1002)
Q Consensus 809 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil 888 (1002)
.+||+|||++.......... ...........||+.|+|||++.+..++.++|||||||++
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~--------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il 250 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHK--------------------QYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCM 250 (345)
T ss_dssp SEEECCCTTCEESSGGGCCC--------------------CCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHH
T ss_pred cEEEEeCCCceecccccccc--------------------cchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHH
Confidence 99999999997653211100 0011122456899999999999999999999999999999
Q ss_pred HHHHcCCCCCCCC--ChHHHHHHHHhCCCCCC-------CCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001869 889 YEMLYGYTPFRGK--TRQKTFANILHKDLKFP-------SSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 889 ~elltG~~Pf~~~--~~~~~~~~i~~~~~~~~-------~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
|+|++|..||.+. +...............+ ....++.++.+||.+||..||.+||++.+
T Consensus 251 ~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ 318 (345)
T 2v62_A 251 LRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQA 318 (345)
T ss_dssp HHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHH
T ss_pred HHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHH
Confidence 9999999999652 22222111111111111 11257889999999999999999999433
No 234
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=7.9e-38 Score=357.49 Aligned_cols=249 Identities=17% Similarity=0.197 Sum_probs=200.5
Q ss_pred ccccCCcccccccccCCcEEEEEE-----EEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC---CCCcceEEE
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLV-----ELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD---HPFVPALYA 736 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a-----~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~---hpnIv~l~~ 736 (1002)
.+..++|++.+.||+|+||.||+| .+..+++.||||++... ....+..|+.+++.+. |+||+.+++
T Consensus 61 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~~~~l~~~~~~~iv~~~~ 134 (365)
T 3e7e_A 61 QLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA------NPWEFYIGTQLMERLKPSMQHMFMKFYS 134 (365)
T ss_dssp ECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC------CHHHHHHHHHHHHHSCGGGGGGBCCEEE
T ss_pred EECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC------ChhHHHHHHHHHHHhhhhhhhhhhhhhe
Confidence 355678999999999999999999 46778999999998754 2346777888888886 899999999
Q ss_pred EEEeCCeEEEEEecCCCCcHHHHHhhC---CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEcc-------
Q 001869 737 SFQTKTHVCLITDYCPGGELFLLLDRQ---PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG------- 806 (1002)
Q Consensus 737 ~~~~~~~~~lV~E~~~ggsL~~~l~~~---~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~------- 806 (1002)
++...+..|+|||||+||+|.+++... ....+++..++.++.||+.||+|||++||+||||||+|||++.
T Consensus 135 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~ 214 (365)
T 3e7e_A 135 AHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDD 214 (365)
T ss_dssp EEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC--
T ss_pred eeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccc
Confidence 999999999999999999999999742 2456999999999999999999999999999999999999998
Q ss_pred ----CCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHH
Q 001869 807 ----NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 882 (1002)
Q Consensus 807 ----~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIw 882 (1002)
++.+||+|||+|+.+... .........+||+.|+|||++.+..++.++|||
T Consensus 215 ~~~~~~~~kl~DFG~a~~~~~~-------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw 269 (365)
T 3e7e_A 215 EDDLSAGLALIDLGQSIDMKLF-------------------------PKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYF 269 (365)
T ss_dssp ----CTTEEECCCTTCEEGGGS-------------------------CTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHH
T ss_pred cccccCCEEEeeCchhhhhhcc-------------------------CCCceeeeecCCCCCCChHHhcCCCCCccccHH
Confidence 899999999999653211 001123456799999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHH
Q 001869 883 ALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 950 (1002)
Q Consensus 883 SlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~ 950 (1002)
||||++|+|++|+.||........ .....++. ...+..+.+++..||+.+|.+|++....+.
T Consensus 270 slG~il~elltg~~pf~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~ 331 (365)
T 3e7e_A 270 GVAATVYCMLFGTYMKVKNEGGEC-----KPEGLFRR-LPHLDMWNEFFHVMLNIPDCHHLPSLDLLR 331 (365)
T ss_dssp HHHHHHHHHHHSSCCCEEEETTEE-----EECSCCTT-CSSHHHHHHHHHHHHCCCCTTCCCCHHHHH
T ss_pred HHHHHHHHHHhCCCccccCCCCce-----eechhccc-cCcHHHHHHHHHHHcCCCCCCcchHHHHHH
Confidence 999999999999999965432110 00111111 134677899999999999999987544333
No 235
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.6e-37 Score=376.26 Aligned_cols=253 Identities=21% Similarity=0.291 Sum_probs=207.0
Q ss_pred cccCCccccc-ccccCCcEEEEEEEEc--CCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 001869 666 INLQHFRPIK-PLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 742 (1002)
Q Consensus 666 i~~~~y~i~~-~LG~G~~g~Vy~a~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 742 (1002)
+..+.|.+.+ .||+|+||.||+|.+. .++..||||+++... .......+.+|+.+|+.++||||+++++++.. +
T Consensus 332 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~ 408 (613)
T 2ozo_A 332 LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-E 408 (613)
T ss_dssp CCTTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC--SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-S
T ss_pred ccccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-C
Confidence 3344555555 7999999999999875 356789999998652 33456788999999999999999999999976 5
Q ss_pred eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccC
Q 001869 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 822 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~ 822 (1002)
.+|+|||||.+|+|.+++... ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 409 ~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~ 487 (613)
T 2ozo_A 409 ALMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALG 487 (613)
T ss_dssp SEEEEEECCTTCBHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC
T ss_pred CeEEEEEeCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCccccc
Confidence 699999999999999999754 3569999999999999999999999999999999999999999999999999996543
Q ss_pred CCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCC
Q 001869 823 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 901 (1002)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~ 901 (1002)
..... ........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.
T Consensus 488 ~~~~~------------------------~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~ 543 (613)
T 2ozo_A 488 ADDSY------------------------YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 543 (613)
T ss_dssp --------------------------------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred CCCce------------------------eeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence 21100 011122346789999999998899999999999999999998 99999998
Q ss_pred ChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001869 902 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 902 ~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
+..+.+..+..+. ..+....++..+.+||.+||+.||.+||++.+
T Consensus 544 ~~~~~~~~i~~~~-~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~ 588 (613)
T 2ozo_A 544 KGPEVMAFIEQGK-RMECPPECPPELYALMSDCWIYKWEDRPDFLT 588 (613)
T ss_dssp CSHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHH
T ss_pred CHHHHHHHHHcCC-CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHH
Confidence 8888777776553 33334468899999999999999999999544
No 236
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7e-38 Score=358.74 Aligned_cols=251 Identities=18% Similarity=0.230 Sum_probs=198.7
Q ss_pred CcccccccccCCcEEEEEEEEcCC---CeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEE-eCCeEE
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ-TKTHVC 745 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~~ 745 (1002)
.|++.+.||+|+||.||+|.+..+ +..||+|.+... ........+.+|+.+++.++||||+++++++. ..+..|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~ 167 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 167 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC--SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC--CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeE
Confidence 588899999999999999998543 346899988753 34556778999999999999999999999864 456889
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCC
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 825 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~ 825 (1002)
+||||+.+++|.+++... ...++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 168 lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 246 (373)
T 3c1x_A 168 VVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246 (373)
T ss_dssp EEEECCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EEEECCCCCCHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeeccccccccccc
Confidence 999999999999999754 3458999999999999999999999999999999999999999999999999996543211
Q ss_pred CCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChH
Q 001869 826 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 904 (1002)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~ 904 (1002)
.. .........||+.|+|||++.+..++.++|||||||++|+|++ |.+||.+.+..
T Consensus 247 ~~-----------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~ 303 (373)
T 3c1x_A 247 FD-----------------------SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 303 (373)
T ss_dssp ----------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS
T ss_pred cc-----------------------cccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH
Confidence 00 0011223467889999999999999999999999999999999 78888877666
Q ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001869 905 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 905 ~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
+....+..+.. ......++..+.+||.+||+.||.+|||+.+
T Consensus 304 ~~~~~~~~~~~-~~~p~~~~~~l~~li~~cl~~dp~~RPs~~e 345 (373)
T 3c1x_A 304 DITVYLLQGRR-LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSE 345 (373)
T ss_dssp CHHHHHHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred HHHHHHHcCCC-CCCCCCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 66655555432 3334457889999999999999999999443
No 237
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=3.2e-37 Score=376.47 Aligned_cols=244 Identities=22% Similarity=0.311 Sum_probs=202.7
Q ss_pred cccccCCcEEEEEEEE--cCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecCC
Q 001869 675 KPLGSGDTGSVHLVEL--CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCP 752 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~E~~~ 752 (1002)
+.||+|+||.||+|.+ ..+++.||||+++.. .........+.+|+.+|+.++||||+++++++.. +..++|||||.
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~ 452 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNE-ANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAE 452 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGG-GGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccc-cCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccC
Confidence 4799999999999965 456789999999765 2344556789999999999999999999999875 55899999999
Q ss_pred CCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcc
Q 001869 753 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 832 (1002)
Q Consensus 753 ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 832 (1002)
+|+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++........
T Consensus 453 ~g~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~----- 525 (635)
T 4fl3_A 453 LGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY----- 525 (635)
T ss_dssp TEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---------
T ss_pred CCCHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc-----
Confidence 99999999764 45999999999999999999999999999999999999999999999999999654321110
Q ss_pred hhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHH
Q 001869 833 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANIL 911 (1002)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~ 911 (1002)
........||+.|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+....+.
T Consensus 526 -------------------~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~ 586 (635)
T 4fl3_A 526 -------------------YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 586 (635)
T ss_dssp ----------------------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH
T ss_pred -------------------cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 011123457889999999999999999999999999999998 999999998888777666
Q ss_pred hCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChh
Q 001869 912 HKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 912 ~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
.+. ..+....++.++.+||.+||+.||.+||++.+
T Consensus 587 ~~~-~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~ 621 (635)
T 4fl3_A 587 KGE-RMGCPAGCPREMYDLMNLCWTYDVENRPGFAA 621 (635)
T ss_dssp TTC-CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred cCC-CCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHH
Confidence 543 33344568899999999999999999999444
No 238
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.6e-37 Score=347.48 Aligned_cols=257 Identities=20% Similarity=0.340 Sum_probs=209.1
Q ss_pred ccccCCcccccccccCCcEEEEEEE----EcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVE----LCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (1002)
.+..++|++++.||+|+||.||+|. +..+++.||+|++... .......+.+|+.+++.++||||+++++++..
T Consensus 37 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 113 (326)
T 2w1i_A 37 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQHDNIVKYKGVCYS 113 (326)
T ss_dssp CCCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC---CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC
T ss_pred ccCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEe
Confidence 4556789999999999999999998 4568999999998753 34556788999999999999999999999865
Q ss_pred C--CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCC
Q 001869 741 K--THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (1002)
Q Consensus 741 ~--~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a 818 (1002)
. ..+++||||+++++|.+++.... ..++...++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus 114 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~ 192 (326)
T 2w1i_A 114 AGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 192 (326)
T ss_dssp ----CCEEEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred cCCCceEEEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcch
Confidence 4 37899999999999999998753 45899999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCC
Q 001869 819 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 898 (1002)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf 898 (1002)
......... ........+++.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus 193 ~~~~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~ 248 (326)
T 2w1i_A 193 KVLPQDKEY------------------------YKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 248 (326)
T ss_dssp EECCSSCSE------------------------EECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGG
T ss_pred hhccccccc------------------------cccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCC
Confidence 664321110 01112345788899999999888899999999999999999999998
Q ss_pred CCCChH---------------HHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001869 899 RGKTRQ---------------KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 899 ~~~~~~---------------~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
...... ..+...+......+....++..+.+||.+||+.||.+||| +.+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps----~~el~ 314 (326)
T 2w1i_A 249 KSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPS----FRDLA 314 (326)
T ss_dssp GSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCC----HHHHH
T ss_pred CCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcC----HHHHH
Confidence 642110 1122333334444555668899999999999999999999 55554
No 239
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=348.93 Aligned_cols=261 Identities=22% Similarity=0.268 Sum_probs=210.7
Q ss_pred cccccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001869 662 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 662 ~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
..+.+..++|++.+.||+|+||.||+|.+.. .+|+|++..... .......+.+|+.+++.++||||+++++++...
T Consensus 26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 101 (319)
T 2y4i_B 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERD-NEDQLKAFKREVMAYRQTRHENVVLFMGACMSP 101 (319)
T ss_dssp GGSSSCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSC-CCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECS
T ss_pred ccccCCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCC-CHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecC
Confidence 3456778999999999999999999999854 399999875422 222334566799999999999999999999999
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
+.+++||||++|++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++ ++.+||+|||++...
T Consensus 102 ~~~~iv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~ 179 (319)
T 2y4i_B 102 PHLAIITSLCKGRTLYSVVRDA-KIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSIS 179 (319)
T ss_dssp SCEEEECBCCCSEEHHHHTTSS-CCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC--
T ss_pred CceEEEeecccCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCcccc
Confidence 9999999999999999999764 34689999999999999999999999999999999999998 789999999998653
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC---------CCCCChhhHHHHHHHHHHHH
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---------AGHTSAVDWWALGILLYEML 892 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~---------~~~~~~sDIwSlGvil~ell 892 (1002)
...... ..........||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 180 ~~~~~~----------------------~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~ 237 (319)
T 2y4i_B 180 GVLQAG----------------------RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELH 237 (319)
T ss_dssp ------------------------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHH
T ss_pred cccccc----------------------ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHH
Confidence 211000 00112234569999999999875 34678999999999999999
Q ss_pred cCCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 893 YGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 893 tG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
+|..||.+.........+.....+......++..+.+||.+||..||.+||| +.++++
T Consensus 238 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~l~~ 295 (319)
T 2y4i_B 238 AREWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPT----FTKLMD 295 (319)
T ss_dssp HSSCSSSSCCHHHHHHHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCC----HHHHHH
T ss_pred hCCCCCCCCCHHHHHHHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcC----HHHHHH
Confidence 9999999988888777776665444444457888999999999999999999 555543
No 240
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=3.1e-37 Score=343.32 Aligned_cols=253 Identities=21% Similarity=0.261 Sum_probs=201.6
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccc-cChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-LNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lV~ 748 (1002)
.|...+.||+|+||.||+|.+ +++.||+|++..... ........+.+|+.+++.++||||+++++++...+..|+||
T Consensus 32 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 109 (307)
T 2nru_A 32 ISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVY 109 (307)
T ss_dssp TTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred ccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEE
Confidence 466679999999999999986 678999999876432 23445678889999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCC
Q 001869 749 DYCPGGELFLLLDRQ-PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 827 (1002)
Q Consensus 749 E~~~ggsL~~~l~~~-~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~ 827 (1002)
||+++++|.+++... ....+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++........
T Consensus 110 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~- 188 (307)
T 2nru_A 110 VYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ- 188 (307)
T ss_dssp ECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSS-
T ss_pred EecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeecccccccccccc-
Confidence 999999999998743 234699999999999999999999999999999999999999999999999999865331110
Q ss_pred CCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHH--
Q 001869 828 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK-- 905 (1002)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~-- 905 (1002)
........||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.....
T Consensus 189 ------------------------~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~ 243 (307)
T 2nru_A 189 ------------------------TVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL 243 (307)
T ss_dssp ------------------------CEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBT
T ss_pred ------------------------cccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHH
Confidence 011234579999999999875 47889999999999999999999997654322
Q ss_pred --HHHHHHhCCC--------CCC-CCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHc
Q 001869 906 --TFANILHKDL--------KFP-SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 954 (1002)
Q Consensus 906 --~~~~i~~~~~--------~~~-~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 954 (1002)
....+..... ..+ .....+..+.+|+.+||+.||.+||| +.++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps----~~~l~~ 299 (307)
T 2nru_A 244 LDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPD----IKKVQQ 299 (307)
T ss_dssp THHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCC----HHHHHH
T ss_pred HHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcC----HHHHHH
Confidence 1112211111 011 11223467889999999999999999 666654
No 241
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=3.4e-37 Score=347.60 Aligned_cols=267 Identities=22% Similarity=0.355 Sum_probs=196.0
Q ss_pred cccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHH--HhCCCCCcceEEEEEEe-
Q 001869 664 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREIL--DMLDHPFVPALYASFQT- 740 (1002)
Q Consensus 664 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il--~~l~hpnIv~l~~~~~~- 740 (1002)
..+..++|++++.||+|+||.||+|.+ +++.||||++... ....+..|.+++ ..++||||+++++.+..
T Consensus 8 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~ 79 (336)
T 3g2f_A 8 PSLDLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFA------NRQNFINEKNIYRVPLMEHDNIARFIVGDERV 79 (336)
T ss_dssp -CCCTTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGG------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEE
T ss_pred CCcChHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeecc------chhhHHHHHHHHHHHhccCcchhhheeccccc
Confidence 356788999999999999999999987 7899999998753 223444455554 45899999999986542
Q ss_pred ----CCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc---------CcccCCCCCCCEEEccC
Q 001869 741 ----KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ---------GIIYRDLKPENVLLQGN 807 (1002)
Q Consensus 741 ----~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~---------gIiHrDLKP~NILl~~~ 807 (1002)
...+|+|||||++|+|.+++... ..+...+..++.||+.||.|||++ ||+||||||+|||++.+
T Consensus 80 ~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~ 156 (336)
T 3g2f_A 80 TADGRMEYLLVMEYYPNGSLXKYLSLH---TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKND 156 (336)
T ss_dssp CTTSCEEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTT
T ss_pred ccCCCceEEEEEecCCCCcHHHHHhhc---ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCC
Confidence 34679999999999999999764 358899999999999999999999 99999999999999999
Q ss_pred CcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC-------CCCCChhh
Q 001869 808 GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-------AGHTSAVD 880 (1002)
Q Consensus 808 g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~-------~~~~~~sD 880 (1002)
+.+||+|||++........... ..........+||+.|+|||++.+ ..++.++|
T Consensus 157 ~~~kL~DFG~a~~~~~~~~~~~-------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~D 217 (336)
T 3g2f_A 157 GTCVISDFGLSMRLTGNRLVRP-------------------GEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVD 217 (336)
T ss_dssp SCEEECCCTTCEECSSSSCC----------------------------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHH
T ss_pred CcEEEeeccceeecccccccCc-------------------cccccccccCCCccceeCchhhcCCcccccccccccccc
Confidence 9999999999976542211100 001112234679999999999987 35566899
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCh-----------------HHHHHHHHhCC---CCCCCC----CCCCHHHHHHHHHccc
Q 001869 881 WWALGILLYEMLYGYTPFRGKTR-----------------QKTFANILHKD---LKFPSS----TPTSLHAKQLMYRLLH 936 (1002)
Q Consensus 881 IwSlGvil~elltG~~Pf~~~~~-----------------~~~~~~i~~~~---~~~~~~----~~~s~~~~~Ll~~~L~ 936 (1002)
||||||++|+|++|..||..... ........... ..++.. ..++..+.+||.+||+
T Consensus 218 iwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 297 (336)
T 3g2f_A 218 MYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWD 297 (336)
T ss_dssp HHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSC
T ss_pred hHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhc
Confidence 99999999999999777643211 12222222221 122211 1234579999999999
Q ss_pred cCcCCCCCChhcHHHH--HcCCCcCC
Q 001869 937 RDPKSRLGSHEGANEI--KKHPFFKG 960 (1002)
Q Consensus 937 ~dP~~Rpt~~~~a~el--L~Hp~f~~ 960 (1002)
.||.+|||+.++++.| +-++|-++
T Consensus 298 ~dP~~Rps~~e~l~~L~~ll~~~~~~ 323 (336)
T 3g2f_A 298 QDAEARLTAQXAEERMAELMMIWERN 323 (336)
T ss_dssp SSGGGSCCHHHHHHHHHHHHHCCCC-
T ss_pred CChhhCcchHHHHHHHHHHHHHHHhc
Confidence 9999999944333322 44777765
No 242
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.7e-37 Score=344.13 Aligned_cols=250 Identities=26% Similarity=0.381 Sum_probs=194.8
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC--CCCCcceEEEEEEeC----
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML--DHPFVPALYASFQTK---- 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l--~hpnIv~l~~~~~~~---- 741 (1002)
.++|++++.||+|+||.||+|.+ +++.||||++... .......|.+++..+ +||||+++++++...
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 107 (337)
T 3mdy_A 36 AKQIQMVKQIGKGRYGEVWMGKW--RGEKVAVKVFFTT------EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107 (337)
T ss_dssp HHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEEEGG------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred ccceEEEeEeecCCCeEEEEEEE--CCceEEEEEEecc------ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence 46899999999999999999998 4899999998643 223445566666554 899999999999877
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc--------CcccCCCCCCCEEEccCCcEEEE
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ--------GIIYRDLKPENVLLQGNGHVSLT 813 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~--------gIiHrDLKP~NILl~~~g~vkL~ 813 (1002)
..+|+||||+++++|.++++.. .+++..++.++.||+.||+|||++ ||+||||||+|||++.++.+||+
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~ 184 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIA 184 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEEC
T ss_pred CceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEE
Confidence 7899999999999999999763 489999999999999999999999 99999999999999999999999
Q ss_pred eccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCCh------hhHHHHHHH
Q 001869 814 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSA------VDWWALGIL 887 (1002)
Q Consensus 814 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~------sDIwSlGvi 887 (1002)
|||++......... ........+||+.|+|||++.+...... +|||||||+
T Consensus 185 Dfg~a~~~~~~~~~-----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~i 241 (337)
T 3mdy_A 185 DLGLAVKFISDTNE-----------------------VDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLI 241 (337)
T ss_dssp CCTTCEECC--------------------------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHH
T ss_pred eCCCceeecccccc-----------------------ccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHH
Confidence 99999654321110 0011234579999999999988766654 999999999
Q ss_pred HHHHHcC----------CCCCCCC----ChHHHHHHHHhCC-C--CCCC---CCCCCHHHHHHHHHccccCcCCCCCChh
Q 001869 888 LYEMLYG----------YTPFRGK----TRQKTFANILHKD-L--KFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 888 l~elltG----------~~Pf~~~----~~~~~~~~i~~~~-~--~~~~---~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
+|+|++| ..||... ............. . .++. ...++..+.+||.+||+.||.+|||
T Consensus 242 l~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps--- 318 (337)
T 3mdy_A 242 LWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLT--- 318 (337)
T ss_dssp HHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCC---
T ss_pred HHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCC---
Confidence 9999999 7777542 2223333333222 1 1111 1234567899999999999999999
Q ss_pred cHHHHHcC
Q 001869 948 GANEIKKH 955 (1002)
Q Consensus 948 ~a~elL~H 955 (1002)
+.++++|
T Consensus 319 -~~ell~~ 325 (337)
T 3mdy_A 319 -ALRVKKT 325 (337)
T ss_dssp -HHHHHHH
T ss_pred -HHHHHHH
Confidence 6666654
No 243
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=5.1e-38 Score=378.67 Aligned_cols=260 Identities=27% Similarity=0.402 Sum_probs=209.2
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe------C
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------K 741 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------~ 741 (1002)
.++|++++.||+|+||.||+|.+..+|+.||||++... ........+.+|+.+++.++||||+++++++.. .
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~--~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~ 90 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPN 90 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC--CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTT
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc--CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCC
Confidence 47899999999999999999999999999999998754 245566788999999999999999999998765 6
Q ss_pred CeEEEEEecCCCCcHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCc---EEEEeccC
Q 001869 742 THVCLITDYCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH---VSLTDFDL 817 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~-~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~---vkL~DFG~ 817 (1002)
+..|+|||||+|++|.+++.... ...+++..++.++.||+.||+|||++||+||||||+||+++.++. +||+|||+
T Consensus 91 ~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 91 DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp SSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred CeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEccccc
Confidence 78899999999999999998642 235899999999999999999999999999999999999997764 99999999
Q ss_pred CcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCC
Q 001869 818 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 818 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~P 897 (1002)
+...... .......||+.|+|||++.+..++.++|||||||++|+|++|..|
T Consensus 171 a~~~~~~----------------------------~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~P 222 (676)
T 3qa8_A 171 AKELDQG----------------------------ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222 (676)
T ss_dssp CCBTTSC----------------------------CCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSS
T ss_pred ccccccc----------------------------cccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCC
Confidence 8654311 112345799999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHH--------------HhCCCCCCC--------CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcC
Q 001869 898 FRGKTRQKTFANI--------------LHKDLKFPS--------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 955 (1002)
Q Consensus 898 f~~~~~~~~~~~i--------------~~~~~~~~~--------~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 955 (1002)
|.+.......... ..+...+.. ...++..+.+||.+||.+||.+||| +.++++|
T Consensus 223 f~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPT----a~elL~h 298 (676)
T 3qa8_A 223 FLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGT----DPQNPNV 298 (676)
T ss_dssp CCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---C----CTTCCCC
T ss_pred CCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcC----HHHHhcC
Confidence 9775433221100 011111111 1225678999999999999999999 8899999
Q ss_pred CCcCCC
Q 001869 956 PFFKGV 961 (1002)
Q Consensus 956 p~f~~~ 961 (1002)
|||+.+
T Consensus 299 p~F~~l 304 (676)
T 3qa8_A 299 GCFQAL 304 (676)
T ss_dssp TTHHHH
T ss_pred HHHHHH
Confidence 999974
No 244
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=1.8e-38 Score=358.43 Aligned_cols=247 Identities=17% Similarity=0.186 Sum_probs=195.3
Q ss_pred cccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeeccccc-----ChhHHHHHHHHHHHHHhCC---------CCCc
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-----NRNKVHRACAEREILDMLD---------HPFV 731 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~~E~~il~~l~---------hpnI 731 (1002)
+..++|++++.||+|+||.||+|.+ +|+.||||++...... .......+.+|+.+++.++ ||||
T Consensus 17 ~~~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~ni 94 (336)
T 2vuw_A 17 LPTEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGF 94 (336)
T ss_dssp SCHHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCB
T ss_pred cccccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCch
Confidence 4457899999999999999999998 7899999999865321 2334467888999998885 7777
Q ss_pred ceEEEEEE------------------------------eCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHH
Q 001869 732 PALYASFQ------------------------------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVV 781 (1002)
Q Consensus 732 v~l~~~~~------------------------------~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil 781 (1002)
+++++++. ..+.+|+|||||.+|++.+.+.. ..+++..++.++.||+
T Consensus 95 v~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 95 IGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLT 171 (336)
T ss_dssp CCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHH
T ss_pred hhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHH
Confidence 77777643 26789999999999987777644 4589999999999999
Q ss_pred HHHHHHH-HcCcccCCCCCCCEEEccCC--------------------cEEEEeccCCcccCCCCCCCCCcchhhhhccc
Q 001869 782 VALEYLH-CQGIIYRDLKPENVLLQGNG--------------------HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHK 840 (1002)
Q Consensus 782 ~aL~yLH-~~gIiHrDLKP~NILl~~~g--------------------~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~ 840 (1002)
.||+||| ++||+||||||+|||++.++ .+||+|||+|+...
T Consensus 172 ~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~------------------ 233 (336)
T 2vuw_A 172 ASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLER------------------ 233 (336)
T ss_dssp HHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEE------------------
T ss_pred HHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecC------------------
Confidence 9999999 99999999999999999887 89999999996532
Q ss_pred CCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHH-HHHHHcCCCCCCCCCh-HHHHHHHHhC-CCCC
Q 001869 841 GQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGIL-LYEMLYGYTPFRGKTR-QKTFANILHK-DLKF 917 (1002)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvi-l~elltG~~Pf~~~~~-~~~~~~i~~~-~~~~ 917 (1002)
....+||+.|+|||++.+.. +.++||||||++ .++++.|..||.+... ......+... ....
T Consensus 234 --------------~~~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 298 (336)
T 2vuw_A 234 --------------DGIVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKT 298 (336)
T ss_dssp --------------TTEEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSS
T ss_pred --------------CCcEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCc
Confidence 11347999999999998776 889999998777 7778889999854211 1122233322 1111
Q ss_pred CC----CCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH-cCCCcC
Q 001869 918 PS----STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK-KHPFFK 959 (1002)
Q Consensus 918 ~~----~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL-~Hp~f~ 959 (1002)
.. ...++.++++||.+||++| | ++++| +||||+
T Consensus 299 ~~~~~~~~~~s~~~~dli~~~L~~d-----s----a~e~l~~Hp~f~ 336 (336)
T 2vuw_A 299 KCNTPAMKQIKRKIQEFHRTMLNFS-----S----ATDLLCQHSLFK 336 (336)
T ss_dssp CCCSHHHHHHHHHHHHHHHHGGGSS-----S----HHHHHHHCGGGC
T ss_pred ccchhhhhhcCHHHHHHHHHHhccC-----C----HHHHHhcCCCcC
Confidence 11 1235778999999999987 7 99999 999996
No 245
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.1e-37 Score=362.27 Aligned_cols=255 Identities=18% Similarity=0.150 Sum_probs=198.9
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCC-CCc---------ce----
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH-PFV---------PA---- 733 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h-pnI---------v~---- 733 (1002)
...|++.+.||+|+||.||+|.+..+|+.||||++.............+.+|+.+++.+.| .|. +.
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 3468889999999999999999999999999999885443344446778899999999977 221 11
Q ss_pred --------EEEEEEe-----CCeEEEEEecCCCCcHHHHHh-----hCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccC
Q 001869 734 --------LYASFQT-----KTHVCLITDYCPGGELFLLLD-----RQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYR 795 (1002)
Q Consensus 734 --------l~~~~~~-----~~~~~lV~E~~~ggsL~~~l~-----~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHr 795 (1002)
+..++.. ...++++|+++ +++|.+++. ......+++..+..++.||+.||+|||++||+||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHr 235 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT 235 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 1111111 23467888877 899999985 2223457788899999999999999999999999
Q ss_pred CCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccc-----
Q 001869 796 DLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII----- 870 (1002)
Q Consensus 796 DLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l----- 870 (1002)
||||+|||++.++.+||+|||+++.... .....+| +.|+|||++
T Consensus 236 DiKp~NILl~~~~~~kL~DFG~a~~~~~------------------------------~~~~~~g-~~y~aPE~~~~~~~ 284 (413)
T 3dzo_A 236 YLRPVDIVLDQRGGVFLTGFEHLVRDGA------------------------------SAVSPIG-RGFAPPETTAERML 284 (413)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETTE------------------------------EECCCCC-TTTCCHHHHHHHTS
T ss_pred CcccceEEEecCCeEEEEeccceeecCC------------------------------ccccCCC-CceeCchhhhcccc
Confidence 9999999999999999999999854321 1234578 999999999
Q ss_pred -----cCCCCCChhhHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCC
Q 001869 871 -----AGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS 945 (1002)
Q Consensus 871 -----~~~~~~~~sDIwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~ 945 (1002)
.+..++.++|||||||++|+|++|+.||.+.+.......+.. ....++..+.+||.+||+.||.+||+
T Consensus 285 ~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~------~~~~~~~~~~~li~~~l~~dP~~Rpt- 357 (413)
T 3dzo_A 285 PFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFR------SCKNIPQPVRALLEGFLRYPKEDRLL- 357 (413)
T ss_dssp TTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGGGS------SCCCCCHHHHHHHHHHTCSSGGGSCC-
T ss_pred ccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHHHh------hcccCCHHHHHHHHHHccCChhhCcC-
Confidence 556678899999999999999999999987665443333322 22356789999999999999999999
Q ss_pred hhcHHHHHcCCCcCCCChh
Q 001869 946 HEGANEIKKHPFFKGVNWA 964 (1002)
Q Consensus 946 ~~~a~elL~Hp~f~~~~~~ 964 (1002)
+.++++||||+.+.-.
T Consensus 358 ---~~~~l~~~~~~~~~~~ 373 (413)
T 3dzo_A 358 ---PLQAMETPEYEQLRTE 373 (413)
T ss_dssp ---HHHHTTSHHHHHHHHH
T ss_pred ---HHHHHhCHHHHHHHHH
Confidence 9999999999986433
No 246
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=5.7e-36 Score=366.74 Aligned_cols=254 Identities=25% Similarity=0.365 Sum_probs=211.0
Q ss_pred ccccCCcccccccccCCcEEEEEEEEcCC---CeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 001869 665 QINLQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 741 (1002)
Q Consensus 665 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 741 (1002)
.+..++|++.+.||+|+||.||+|.+..+ +..+|+|.+... ........+.+|+.+++.++||||+++++++. .
T Consensus 386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~ 462 (656)
T 2j0j_A 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC--TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E 462 (656)
T ss_dssp BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST--TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-S
T ss_pred ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-c
Confidence 34567899999999999999999998643 568999988653 23445578889999999999999999999985 4
Q ss_pred CeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCccc
Q 001869 742 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 742 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
+..|+||||+++|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 463 ~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~ 541 (656)
T 2j0j_A 463 NPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 541 (656)
T ss_dssp SSCEEEEECCTTCBHHHHHHHT-TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSC
T ss_pred CceEEEEEcCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeec
Confidence 6689999999999999999864 345899999999999999999999999999999999999999999999999999654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCC
Q 001869 822 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 900 (1002)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~ 900 (1002)
..... .......||+.|+|||++.+..++.++|||||||++|+|++ |..||.+
T Consensus 542 ~~~~~--------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~ 595 (656)
T 2j0j_A 542 EDSTY--------------------------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 595 (656)
T ss_dssp CC------------------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred CCCcc--------------------------eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCC
Confidence 31110 01123457889999999998899999999999999999997 9999999
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHH
Q 001869 901 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 953 (1002)
Q Consensus 901 ~~~~~~~~~i~~~~~~~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL 953 (1002)
....+.+..+.... ..+....++..+.+||.+||..||.+||| +.+++
T Consensus 596 ~~~~~~~~~i~~~~-~~~~~~~~~~~l~~li~~~l~~dP~~RPs----~~el~ 643 (656)
T 2j0j_A 596 VKNNDVIGRIENGE-RLPMPPNCPPTLYSLMTKCWAYDPSRRPR----FTELK 643 (656)
T ss_dssp CCHHHHHHHHHHTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHH
T ss_pred CCHHHHHHHHHcCC-CCCCCccccHHHHHHHHHHcCCChhHCcC----HHHHH
Confidence 88888877776654 22334467899999999999999999999 55554
No 247
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=2.3e-36 Score=341.57 Aligned_cols=250 Identities=23% Similarity=0.312 Sum_probs=198.8
Q ss_pred cCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHh--CCCCCcceEEEEEEeCC---
Q 001869 668 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDM--LDHPFVPALYASFQTKT--- 742 (1002)
Q Consensus 668 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~--l~hpnIv~l~~~~~~~~--- 742 (1002)
.++|++.+.||+|+||.||+|.+ +++.||||++... ....+.+|.+++.. ++||||+++++++...+
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~ 112 (342)
T 1b6c_B 41 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 112 (342)
T ss_dssp HHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG------GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred cccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch------hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence 36899999999999999999998 5899999998643 23567788999888 78999999999998765
Q ss_pred -eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH--------HcCcccCCCCCCCEEEccCCcEEEE
Q 001869 743 -HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH--------CQGIIYRDLKPENVLLQGNGHVSLT 813 (1002)
Q Consensus 743 -~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH--------~~gIiHrDLKP~NILl~~~g~vkL~ 813 (1002)
.+|+||||+++++|.+++... .+++..++.++.||+.||.||| ++||+||||||+|||++.++.+||+
T Consensus 113 ~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 189 (342)
T 1b6c_B 113 TQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 189 (342)
T ss_dssp CCEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEEC
T ss_pred ceeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEE
Confidence 899999999999999999763 4899999999999999999999 8999999999999999999999999
Q ss_pred eccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCC------CCChhhHHHHHHH
Q 001869 814 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG------HTSAVDWWALGIL 887 (1002)
Q Consensus 814 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~------~~~~sDIwSlGvi 887 (1002)
|||++......... .........||+.|+|||++.+.. ++.++|||||||+
T Consensus 190 Dfg~~~~~~~~~~~-----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~i 246 (342)
T 1b6c_B 190 DLGLAVRHDSATDT-----------------------IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV 246 (342)
T ss_dssp CCTTCEEEETTTTE-----------------------EEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHH
T ss_pred ECCCceeccccccc-----------------------cccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHH
Confidence 99998654321100 000123457999999999997763 3358999999999
Q ss_pred HHHHHcC----------CCCCCCCC-----hHHHHHHHHhCCCCCCCC-----CCCCHHHHHHHHHccccCcCCCCCChh
Q 001869 888 LYEMLYG----------YTPFRGKT-----RQKTFANILHKDLKFPSS-----TPTSLHAKQLMYRLLHRDPKSRLGSHE 947 (1002)
Q Consensus 888 l~elltG----------~~Pf~~~~-----~~~~~~~i~~~~~~~~~~-----~~~s~~~~~Ll~~~L~~dP~~Rpt~~~ 947 (1002)
+|+|++| ..||.... .......+.......... ..++..+.+||.+||+.||.+|||
T Consensus 247 l~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps--- 323 (342)
T 1b6c_B 247 FWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT--- 323 (342)
T ss_dssp HHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCC---
T ss_pred HHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCC---
Confidence 9999999 78987642 233333333332221111 123457889999999999999999
Q ss_pred cHHHHHcC
Q 001869 948 GANEIKKH 955 (1002)
Q Consensus 948 ~a~elL~H 955 (1002)
+.++++|
T Consensus 324 -~~~i~~~ 330 (342)
T 1b6c_B 324 -ALRIKKT 330 (342)
T ss_dssp -HHHHHHH
T ss_pred -HHHHHHH
Confidence 6666554
No 248
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.7e-36 Score=334.52 Aligned_cols=231 Identities=16% Similarity=0.130 Sum_probs=190.3
Q ss_pred ccccccccCCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 001869 661 DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 740 (1002)
Q Consensus 661 ~~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 740 (1002)
..|..+..++|++++.||+|+||.||+|.+..+++.||||++.............+.+|+.+++.++||||+++++++..
T Consensus 23 ~~g~~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~ 102 (286)
T 3uqc_A 23 VPGARIANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHT 102 (286)
T ss_dssp CTTCEETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE
T ss_pred CCCCEEecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEE
Confidence 44554666889999999999999999999999999999999987765556667889999999999999999999999999
Q ss_pred CCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcc
Q 001869 741 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 741 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
.+..|+||||++|++|.++++.. .....+..++.||+.||+|||++||+||||||+|||++.+|.+||+++|.
T Consensus 103 ~~~~~lv~e~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~~--- 175 (286)
T 3uqc_A 103 RAGGLVVAEWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPAT--- 175 (286)
T ss_dssp TTEEEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCCC---
T ss_pred CCcEEEEEEecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEeccc---
Confidence 99999999999999999999542 35567888999999999999999999999999999999999999985552
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCCC
Q 001869 821 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 900 (1002)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~~ 900 (1002)
++| ++.++|||||||++|+|++|+.||.+
T Consensus 176 --------------------------------------------~~~-------~~~~~Di~slG~il~elltg~~Pf~~ 204 (286)
T 3uqc_A 176 --------------------------------------------MPD-------ANPQDDIRGIGASLYALLVNRWPLPE 204 (286)
T ss_dssp --------------------------------------------CTT-------CCHHHHHHHHHHHHHHHHHSEECSCC
T ss_pred --------------------------------------------cCC-------CCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 222 57799999999999999999999988
Q ss_pred CChHHHHH---HHHhCCCCCC--CCCCCCHHHHHHHHHccccCcCCCCCChhcHH
Q 001869 901 KTRQKTFA---NILHKDLKFP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 950 (1002)
Q Consensus 901 ~~~~~~~~---~i~~~~~~~~--~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~ 950 (1002)
.+....+. .........+ ....++..+.+||.+||+.||.+| |+.+.++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~ 258 (286)
T 3uqc_A 205 AGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLN 258 (286)
T ss_dssp CSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHH
T ss_pred CCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHH
Confidence 65432111 1111111111 124578899999999999999999 9444333
No 249
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6e-38 Score=347.97 Aligned_cols=247 Identities=23% Similarity=0.320 Sum_probs=180.0
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHh--CCCCCcceEEEEEEeCC----
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDM--LDHPFVPALYASFQTKT---- 742 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~--l~hpnIv~l~~~~~~~~---- 742 (1002)
++|++.+.||+|+||.||+|.+ +++.||||++... ....+..|.+++.. ++||||+++++++...+
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 74 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 74 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-C--TTSCEEEEECC-T------THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSE
T ss_pred ceeeehhhccCCCCeEEEEEEE--cCcceEEEEeccc------chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccc
Confidence 5799999999999999999987 5889999998643 23556778888877 79999999999998776
Q ss_pred eEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH--------HcCcccCCCCCCCEEEccCCcEEEEe
Q 001869 743 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH--------CQGIIYRDLKPENVLLQGNGHVSLTD 814 (1002)
Q Consensus 743 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH--------~~gIiHrDLKP~NILl~~~g~vkL~D 814 (1002)
.+|+||||+.+|+|.+++... .++...++.++.|++.||+||| ++||+||||||+|||++.++.+||+|
T Consensus 75 ~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~D 151 (303)
T 3gxj_A 75 QLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 151 (303)
T ss_dssp EEEEEEECCTTCCHHHHHHHC---CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCC
T ss_pred eeEEEEeccCCCCHHHHHhcc---CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEee
Confidence 889999999999999999763 4788889999999999999999 99999999999999999999999999
Q ss_pred ccCCcccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCC------CCCChhhHHHHHHHH
Q 001869 815 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA------GHTSAVDWWALGILL 888 (1002)
Q Consensus 815 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~------~~~~~sDIwSlGvil 888 (1002)
||++......... .........||+.|+|||++.+. .++.++|||||||++
T Consensus 152 Fg~a~~~~~~~~~-----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il 208 (303)
T 3gxj_A 152 LGLAVRHDSATDT-----------------------IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVF 208 (303)
T ss_dssp CCC-CCEETTTTE-----------------------ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC
T ss_pred cCcceeccCCCcc-----------------------cccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHH
Confidence 9998654321110 00112345799999999999776 334589999999999
Q ss_pred HHHHcC----------CCCCCCCCh-----HHHHHHHHhCCCCCCCC-----CCCCHHHHHHHHHccccCcCCCCCChhc
Q 001869 889 YEMLYG----------YTPFRGKTR-----QKTFANILHKDLKFPSS-----TPTSLHAKQLMYRLLHRDPKSRLGSHEG 948 (1002)
Q Consensus 889 ~elltG----------~~Pf~~~~~-----~~~~~~i~~~~~~~~~~-----~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~ 948 (1002)
|+|++| ..||..... ......+.......... ...+..+.+||.+||+.||.+|||
T Consensus 209 ~el~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps---- 284 (303)
T 3gxj_A 209 WEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT---- 284 (303)
T ss_dssp -CTGGGBCBTTBC-CCCCTTTTTCC-CCCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCC----
T ss_pred HHHHhcCCCccccceeeccccccCCCCccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCC----
Confidence 999999 778755322 22223333332221111 123347899999999999999999
Q ss_pred HHHHH
Q 001869 949 ANEIK 953 (1002)
Q Consensus 949 a~elL 953 (1002)
+.+++
T Consensus 285 ~~~i~ 289 (303)
T 3gxj_A 285 ALRIK 289 (303)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55554
No 250
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=9.6e-36 Score=367.82 Aligned_cols=242 Identities=23% Similarity=0.311 Sum_probs=197.1
Q ss_pred cccCCcccccccccCCcEEEEEEEEcC-CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe-
Q 001869 666 INLQHFRPIKPLGSGDTGSVHLVELCG-SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH- 743 (1002)
Q Consensus 666 i~~~~y~i~~~LG~G~~g~Vy~a~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~- 743 (1002)
+..++|++++.||+|+||.||+|.+.. +++.||||++... ........+.+|+.+++.++||||+++++++...+.
T Consensus 77 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 154 (681)
T 2pzi_A 77 IVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS--GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRH 154 (681)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS--CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTT
T ss_pred EeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc--CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCC
Confidence 345899999999999999999999976 7999999998753 234556678899999999999999999999987655
Q ss_pred ----EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCc
Q 001869 744 ----VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (1002)
Q Consensus 744 ----~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~ 819 (1002)
.|+||||++|++|.+++.. .+++..++.++.||+.||.|||++||+||||||+|||++.+ .+||+|||++.
T Consensus 155 ~~~~~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~ 229 (681)
T 2pzi_A 155 GDPVGYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVS 229 (681)
T ss_dssp SCEEEEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCE
T ss_pred CCceeEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccch
Confidence 7999999999999988754 49999999999999999999999999999999999999975 89999999985
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCCCC
Q 001869 820 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 899 (1002)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~Pf~ 899 (1002)
.... ....+||+.|+|||++.+.. +.++|||||||++|+|++|..||.
T Consensus 230 ~~~~-------------------------------~~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~ 277 (681)
T 2pzi_A 230 RINS-------------------------------FGYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRN 277 (681)
T ss_dssp ETTC-------------------------------CSCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEET
T ss_pred hccc-------------------------------CCccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCc
Confidence 4321 13457999999999987654 789999999999999999999986
Q ss_pred CCChHHHHHHHHhCCCC-CCCCCCCCHHHHHHHHHccccCcCCCCCChhcHHHHHcCCCcC
Q 001869 900 GKTRQKTFANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 959 (1002)
Q Consensus 900 ~~~~~~~~~~i~~~~~~-~~~~~~~s~~~~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 959 (1002)
+.... .+. .......+..+.+||.+||+.||.+||+ ..+.+.|+|+.
T Consensus 278 ~~~~~---------~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~----~~~~l~~~l~~ 325 (681)
T 2pzi_A 278 GRYVD---------GLPEDDPVLKTYDSYGRLLRRAIDPDPRQRFT----TAEEMSAQLTG 325 (681)
T ss_dssp TEECS---------SCCTTCHHHHHCHHHHHHHHHHTCSSGGGSCS----SHHHHHHHHHH
T ss_pred ccccc---------cccccccccccCHHHHHHHhhhccCChhhCCC----HHHHHHHHHHH
Confidence 53110 000 0000113567899999999999999999 56666677664
No 251
>3ewk_A Sensor protein; PAS domain, alpha/beta fold, kinase, phosphoprotein, transfe flavoprotein; HET: FAD; 2.34A {Methylococcus capsulatus}
Probab=100.00 E-value=6.4e-31 Score=279.30 Aligned_cols=220 Identities=22% Similarity=0.443 Sum_probs=206.3
Q ss_pred EEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCcEEEEEE
Q 001869 202 FVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLL 281 (1002)
Q Consensus 202 i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~w~~~ 281 (1002)
|+++|. +|+|+++|++|++++||+.+|++|+++..+.++.........++..+..+..+.++++.+++||+.+|+.+
T Consensus 2 i~i~D~---~g~i~~~N~a~~~l~Gy~~~el~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~ 78 (227)
T 3ewk_A 2 VSITDL---QGRILYANDNFCAVSRYGREELVGQDHRIVNSGYHGKAYIRDMWRTISRGNIWQGEFCNRRKDGTRYWVDS 78 (227)
T ss_dssp EEEEET---TCBEEEECHHHHHHTTCCHHHHTTSBGGGGCCSCSCHHHHHHHHHHHTTTCCEEEEEEEECSSSCEEEEEE
T ss_pred EEEECC---CCcEEehHHHHHHHHCcCHHHHcCCCHHHcCCCCCCHHHHHHHHHHHHcCCeEEEEEEEEcCCCCEEeeee
Confidence 678898 88899999999999999999999999988887777777888888999999999999999999999999999
Q ss_pred EeeeeecCCCCEEEEEEEEeccchhhHHHHHhhcCCCCCchhHHHHHHHHHHHhHHHHHHHHHHccCCCCcccCCCCCcc
Q 001869 282 TIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPRSLSESTNRPPI 361 (1002)
Q Consensus 282 ~~~pi~d~~G~v~~~v~~~~DITerk~~e~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (1002)
++.|++|.+|.+.+++++++|||++|++|++|+.
T Consensus 79 ~~~p~~d~~g~~~~~~~~~~DIT~~k~~e~~l~~---------------------------------------------- 112 (227)
T 3ewk_A 79 TIVPLMDNAGKPRQYISIRRDITAQKEAEAQLAR---------------------------------------------- 112 (227)
T ss_dssp EEEEEECSSSCEEEEEEEEEECTTTTHHHHHHHH----------------------------------------------
T ss_pred EEEEEEcCCCCEEEEEEEEEehhhHHHHHHHHHH----------------------------------------------
Confidence 9999999999999999999999999999988762
Q ss_pred cccCCCCchhhhcccccCCCCCCCCCCCCCCCCCCcccccccccccchhhccccCCcccccccccccccCCCCCCccccc
Q 001869 362 IRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQKSGRRSFMGLIGRKSQSTDDHDSFENEI 441 (1002)
Q Consensus 362 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (1002)
T Consensus 113 -------------------------------------------------------------------------------- 112 (227)
T 3ewk_A 113 -------------------------------------------------------------------------------- 112 (227)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCCCCCCCCCCCchhhHHHHHHHhhcccHHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCc
Q 001869 442 IMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCR 521 (1002)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~ 521 (1002)
++.++++++++|+++|.+|+ |+++|++|++++||+.+|++|++..
T Consensus 113 --------------------------------~~~~~~~~~~~i~~~d~~g~---i~~~N~~~~~~~G~~~~e~~g~~~~ 157 (227)
T 3ewk_A 113 --------------------------------LKQAMDANSEMILLTDRAGR---IIYANPALCRFSGMAEGELLGQSPS 157 (227)
T ss_dssp --------------------------------HHHHHHTCCSEEEEECTTSC---EEEECHHHHHHHTCCTHHHHSSCGG
T ss_pred --------------------------------HHHHHhcCcCeEEEEcCCCc---EEEEchHHHHHhCCCHHHHcCCChh
Confidence 67788999999999999777 9999999999999999999999999
Q ss_pred cccCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCC------EEEEEEEEEeeeCCCCCEEEEEEEEec
Q 001869 522 FLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGN------KFWNLFHLQPMRDQKGEVQYFIGVQLD 585 (1002)
Q Consensus 522 ~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG~------~~wv~~~~~pi~d~~G~v~~~vgi~~D 585 (1002)
.+.++.........+++.+..+..+.+|++.++|+|+ .+|+++++.|++|.+|++++++++++|
T Consensus 158 ~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~k~G~~~~dg~~~~~~~~~~pi~d~~g~~~~~v~i~~D 227 (227)
T 3ewk_A 158 ILDSPLADQETLAAMQEALQAGQPWSGRLLNRRRTGPAPHDAEDYWAEISTTPIHTDGNGLVGYVQIQHD 227 (227)
T ss_dssp GGBCTTSCHHHHHHHHHHHHHTCCEECCEEEEEECCSSSSCEEEEEEEEEEEEEECSSSCEEEEEEEEEC
T ss_pred hccCCCCCHHHHHHHHHHHHcCCceeEEEEEECCCCCcCcccceEEEEEEEEEEECCCCCEEEEEEEecC
Confidence 8999988888999999999999999999999999997 899999999999999999999999998
No 252
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=7.7e-29 Score=298.19 Aligned_cols=190 Identities=16% Similarity=0.124 Sum_probs=135.2
Q ss_pred cccccCCcEEEEEEEEcCCCeEEEEEEeeccccc-------ChhHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEE
Q 001869 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-------NRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~-------~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~l 746 (1002)
..++.|++|.+..++....|..|++|++.+.... .......+.+|+++|+++ .|+||+++++++++++.+||
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL 319 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL 319 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence 4577888888888888788999999999865321 123345688999999999 79999999999999999999
Q ss_pred EEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCC
Q 001869 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
|||||+|++|.+++... +.++.. .|+.||+.||+|||++|||||||||+|||++.+|.+||+|||+|+.....
T Consensus 320 VMEyv~G~~L~d~i~~~--~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~-- 392 (569)
T 4azs_A 320 VMEKLPGRLLSDMLAAG--EEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD-- 392 (569)
T ss_dssp EEECCCSEEHHHHHHTT--CCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC----
T ss_pred EEecCCCCcHHHHHHhC--CCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCC--
Confidence 99999999999999874 457664 47899999999999999999999999999999999999999999654211
Q ss_pred CCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHcCCCC
Q 001869 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 897 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~elltG~~P 897 (1002)
.....+.+||+.|||||++.+. +..++|+||+|+++|.+.++..+
T Consensus 393 -------------------------~~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 393 -------------------------CSWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp --------------------------CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred -------------------------CccccCceechhhccHHHhCCC-CCCcccccccccchhhhccccch
Confidence 1123457899999999999765 56689999999998877655433
No 253
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=7.3e-25 Score=262.13 Aligned_cols=194 Identities=16% Similarity=0.164 Sum_probs=145.6
Q ss_pred ccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccCh-----hHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 001869 672 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR-----NKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 746 (1002)
Q Consensus 672 ~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~-----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 746 (1002)
...+.||+|+||.||++. ..++.+++|.......... ....++.+|+.++++++||||+.+..++...+..|+
T Consensus 339 ~~~~~LG~G~fg~Vy~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l 416 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDS--YLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRI 416 (540)
T ss_dssp ---------CCEEEEEEE--CSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEE
T ss_pred CCCCEEeeCCCEEEEEEE--ECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEE
Confidence 445689999999999994 4678899998755332222 224567899999999999999966666667777899
Q ss_pred EEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCC
Q 001869 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 826 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~ 826 (1002)
|||||+|++|.+++.. +..++.||+.||.|||++||+||||||+|||++. .+||+|||+++.......
T Consensus 417 VmE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~ 484 (540)
T 3en9_A 417 MMSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDED 484 (540)
T ss_dssp EEECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHH
T ss_pred EEECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCCccc
Confidence 9999999999999865 4678999999999999999999999999999998 999999999976431100
Q ss_pred CCCCcchhhhhcccCCCCCccccccCcccccccCCCcccccccccC--CCCCChhhHHHHHHHHHHHHcCCCCCC
Q 001869 827 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFR 899 (1002)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~--~~~~~~sDIwSlGvil~elltG~~Pf~ 899 (1002)
.. .+........+||+.|||||++.. ..|+..+|+||..+-..+.+.++.+|.
T Consensus 485 --------~~------------~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 485 --------KA------------VDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp --------HH------------HHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred --------cc------------cchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 00 000001235689999999999976 567778899999998888887776663
No 254
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.87 E-value=1.4e-22 Score=222.33 Aligned_cols=135 Identities=17% Similarity=0.103 Sum_probs=109.3
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccCh---------------hHHHHHHHHHHHHHhCCCCCcceE
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR---------------NKVHRACAEREILDMLDHPFVPAL 734 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~---------------~~~~~~~~E~~il~~l~hpnIv~l 734 (1002)
.|.+.+.||+|+||.||+|.+ .+|+.||||+++....... .....+.+|+.+++.++ | +.+
T Consensus 91 ~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v 166 (282)
T 1zar_A 91 VDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAV 166 (282)
T ss_dssp CSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSS
T ss_pred EEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCc
Confidence 455669999999999999999 8899999999975321111 23567889999999999 4 555
Q ss_pred EEEEEeCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCCcEEEEe
Q 001869 735 YASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTD 814 (1002)
Q Consensus 735 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~D 814 (1002)
.+++.. +..|+|||||+|++|.+ +.. .....++.||+.||.|||++||+||||||+|||++ +|.+||+|
T Consensus 167 ~~~~~~-~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~D 235 (282)
T 1zar_A 167 PKVYAW-EGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIID 235 (282)
T ss_dssp CCEEEE-ETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECC
T ss_pred CeEEec-cceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEE
Confidence 555544 45699999999999988 422 12456899999999999999999999999999999 99999999
Q ss_pred ccCCc
Q 001869 815 FDLSC 819 (1002)
Q Consensus 815 FG~a~ 819 (1002)
||+|.
T Consensus 236 FG~a~ 240 (282)
T 1zar_A 236 FPQSV 240 (282)
T ss_dssp CTTCE
T ss_pred CCCCe
Confidence 99983
No 255
>4f3l_A Mclock, circadian locomoter output cycles protein kaput; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}
Probab=99.81 E-value=9.3e-20 Score=206.99 Aligned_cols=108 Identities=11% Similarity=0.004 Sum_probs=99.0
Q ss_pred cccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCCEEE
Q 001869 482 EKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGNKFW 561 (1002)
Q Consensus 482 ~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG~~~w 561 (1002)
...++..|.+|. |+|||++++.++||+++|++|+++..++||++.......++..+..|..+..++++++|||+.+|
T Consensus 251 ~~f~~~~~~dg~---~~~vn~~~~~ilGY~~eEl~g~~~~~~iHpdD~~~~~~~~~~~l~~g~~~~~eyR~~~kdG~~vW 327 (361)
T 4f3l_A 251 EEFTSRHSLEWK---FLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIW 327 (361)
T ss_dssp CEEEEEECTTSB---EEEECTTSHHHHCCCHHHHTTSBGGGGBCHHHHHHHHHHHHHHHHHSEEECCCEEEECTTSEEEE
T ss_pred ceeEEEEcCCce---EEEECChhhhhhCcCHHHHcCCCHHHeECHHHHHHHHHHHHHHHhCCCcceEEEEEEecCCCEEE
Confidence 466778888666 99999999999999999999999999999999888888888888888888889999999999999
Q ss_pred EEEEEEeeeCC-CCCEEEEEEEEecCCccccc
Q 001869 562 NLFHLQPMRDQ-KGEVQYFIGVQLDGSEHLEP 592 (1002)
Q Consensus 562 v~~~~~pi~d~-~G~v~~~vgi~~DITerk~~ 592 (1002)
+..++.+++|. .|++.+++|+.+|||+++..
T Consensus 328 v~~~~~~v~~~~~g~~~~iv~~~~dITe~~~~ 359 (361)
T 4f3l_A 328 LQTHYYITYHQWNSRPEFIVCTHTVVSYAEVR 359 (361)
T ss_dssp EEEEEEEEECTTTCCEEEEEEEEEECCHHHHH
T ss_pred EEEEEEEEEcCCCCCeeEEEEEEEECChhHhh
Confidence 99999999998 89999999999999998753
No 256
>4f3l_B BMAL1B; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}
Probab=99.79 E-value=5.7e-19 Score=202.15 Aligned_cols=108 Identities=12% Similarity=0.064 Sum_probs=93.7
Q ss_pred ccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCc-EEEEEEEEecCCCE
Q 001869 481 IEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD-VTVQLINYTKSGNK 559 (1002)
Q Consensus 481 ~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~-~~~e~~~~~kdG~~ 559 (1002)
..+.++..|.+|. ++|||++++.++||+++|++|+++..++||++...+...+...+..+.. ...++++++|||++
T Consensus 277 ~~~fi~~~~~dg~---~~~vn~~~~~ilGY~~eEl~g~~~~~~iHpdD~~~~~~~~~~~l~~~~~~~~~eyR~~~kdG~~ 353 (387)
T 4f3l_B 277 SMEYVSRHAIDGK---FVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSF 353 (387)
T ss_dssp CCEEEEEECTTSB---EEEECTHHHHHHCCCHHHHTTSBGGGTBCHHHHHHHHHHHHHHTTCSSCEECCCEEEECTTSCE
T ss_pred CceEEEEECCCCE---EEEECCCcccccCCCHHHHcCCcHHHeeCHHHHHHHHHHHHHHHhcCCCeeeEEEEEEccCCCE
Confidence 4677888999766 9999999999999999999999999999999988888888787766554 56799999999999
Q ss_pred EEEEEEEEeeeCC-CCCEEEEEEEEecCCcccc
Q 001869 560 FWNLFHLQPMRDQ-KGEVQYFIGVQLDGSEHLE 591 (1002)
Q Consensus 560 ~wv~~~~~pi~d~-~G~v~~~vgi~~DITerk~ 591 (1002)
+|+..+..+++|. .|++.+++|+.+|||+||+
T Consensus 354 vWv~~~~~~~~~~~~g~~~~ivg~~~dIT~Rk~ 386 (387)
T 4f3l_B 354 ITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVL 386 (387)
T ss_dssp EEEEEEEEEEEETTTTEEEEEEEEEEECC----
T ss_pred EEEEEEEEEEECCCCCCEEEEEEEEEEcchhhc
Confidence 9999999999997 8999999999999999985
No 257
>2gj3_A Nitrogen fixation regulatory protein; PAS domain, FAD, redox sensor, atomic resolution, transferase; HET: FAD; 1.04A {Azotobacter vinelandii}
Probab=99.76 E-value=7.9e-18 Score=158.56 Aligned_cols=119 Identities=26% Similarity=0.460 Sum_probs=109.4
Q ss_pred chHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEE
Q 001869 186 RVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG 265 (1002)
Q Consensus 186 ~~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~ 265 (1002)
+++++|+.++++++++|+++|. +|+|+|+|++|++++||+.+|++|+++..+.++.........++..+..+..+.+
T Consensus 2 ~~~~~~~~~~~~~~~~i~~~d~---~g~i~~~N~a~~~~~G~~~~elig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (120)
T 2gj3_A 2 LLPEIFRQTVEHAPIAISITDL---KANILYANRAFRTITGYGSEEVLGKNESILSNGTTPRLVYQALWGRLAQKKPWSG 78 (120)
T ss_dssp CCHHHHHHHHHHCSSEEEEECT---TCBEEEECHHHHHHHCCCTTGGGGCBGGGGCCTTSCHHHHHHHHHHHHTTCCEEE
T ss_pred hhHHHHHHHHHhCCCeEEEECC---CCCEEeehHHHHHHHCcCHHHHcCCCHHHcCCCCCCHHHHHHHHHHHHcCCCEEE
Confidence 3457899999999999999998 8889999999999999999999999988887777776667778888888999999
Q ss_pred EEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhh
Q 001869 266 RLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHT 307 (1002)
Q Consensus 266 e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk 307 (1002)
+++.+++||+.+|+.+++.|++|.+|.+.+++++++|||++|
T Consensus 79 e~~~~~~dG~~~~~~~~~~pi~~~~g~~~~~v~~~~DITe~k 120 (120)
T 2gj3_A 79 VLVNRRKDKTLYLAELTVAPVLNEAGETIYYLGMHRDTSELH 120 (120)
T ss_dssp EEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCSCC
T ss_pred EEEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEeccCcccC
Confidence 999999999999999999999999999999999999999986
No 258
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.76 E-value=9e-19 Score=189.58 Aligned_cols=141 Identities=18% Similarity=0.103 Sum_probs=109.6
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeE--EEEEEeecccccCh---------------------hHHHHHHHHHHHHHhC
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQY--FAMKAMDKGVMLNR---------------------NKVHRACAEREILDML 726 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~--vaiK~~~~~~~~~~---------------------~~~~~~~~E~~il~~l 726 (1002)
-|.+.+.||+|+||.||+|.+..+|+. ||||+++....... .....+.+|+.+++.+
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 377889999999999999999888999 99999765321100 1123577899999999
Q ss_pred CCCCc--ceEEEEEEeCCeEEEEEecCCC-C----cHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH-HcCcccCCCC
Q 001869 727 DHPFV--PALYASFQTKTHVCLITDYCPG-G----ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH-CQGIIYRDLK 798 (1002)
Q Consensus 727 ~hpnI--v~l~~~~~~~~~~~lV~E~~~g-g----sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH-~~gIiHrDLK 798 (1002)
.|+++ +.++.+ +..|+||||+.+ | +|.++... .++..+..++.||+.+|.||| ++||+|||||
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~givHrDlk 198 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAELVHADLS 198 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCS
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCC
Confidence 88754 444432 356899999932 3 77776533 234567889999999999999 9999999999
Q ss_pred CCCEEEccCCcEEEEeccCCccc
Q 001869 799 PENVLLQGNGHVSLTDFDLSCLT 821 (1002)
Q Consensus 799 P~NILl~~~g~vkL~DFG~a~~~ 821 (1002)
|+|||++. .++|+|||+|...
T Consensus 199 p~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 199 EYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp TTSEEESS--SEEECCCTTCEET
T ss_pred HHHEEEcC--cEEEEECcccccC
Confidence 99999997 9999999999553
No 259
>2gj3_A Nitrogen fixation regulatory protein; PAS domain, FAD, redox sensor, atomic resolution, transferase; HET: FAD; 1.04A {Azotobacter vinelandii}
Probab=99.73 E-value=3.7e-17 Score=153.88 Aligned_cols=114 Identities=25% Similarity=0.404 Sum_probs=106.2
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001869 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (1002)
Q Consensus 474 l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~ 553 (1002)
|+.++++++++|+++|.+|+ |+|+|++|++++||+.+|++|++...+.+++........++..+..+..+..+++.+
T Consensus 7 ~~~~~~~~~~~i~~~d~~g~---i~~~N~a~~~~~G~~~~elig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 83 (120)
T 2gj3_A 7 FRQTVEHAPIAISITDLKAN---ILYANRAFRTITGYGSEEVLGKNESILSNGTTPRLVYQALWGRLAQKKPWSGVLVNR 83 (120)
T ss_dssp HHHHHHHCSSEEEEECTTCB---EEEECHHHHHHHCCCTTGGGGCBGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred HHHHHHhCCCeEEEECCCCC---EEeehHHHHHHHCcCHHHHcCCCHHHcCCCCCCHHHHHHHHHHHHcCCCEEEEEEEE
Confidence 88999999999999999777 999999999999999999999998888887777767777888888888999999999
Q ss_pred ecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCccc
Q 001869 554 TKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHL 590 (1002)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk 590 (1002)
++||+.+|+.+++.|++|.+|++.+++++++|||++|
T Consensus 84 ~~dG~~~~~~~~~~pi~~~~g~~~~~v~~~~DITe~k 120 (120)
T 2gj3_A 84 RKDKTLYLAELTVAPVLNEAGETIYYLGMHRDTSELH 120 (120)
T ss_dssp CTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCSCC
T ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEeccCcccC
Confidence 9999999999999999999999999999999999986
No 260
>2pr5_A Blue-light photoreceptor; light-oxygen-voltage, LOV, PER-ARNT-SIM, PAS, flavoprotein, protein; HET: FMN; 1.45A {Bacillus subtilis} PDB: 2pr6_A*
Probab=99.73 E-value=3.4e-17 Score=156.93 Aligned_cols=122 Identities=41% Similarity=0.722 Sum_probs=106.2
Q ss_pred HHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEe
Q 001869 192 KDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYK 271 (1002)
Q Consensus 192 ~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~ 271 (1002)
+.++++++++|+++|..+.+|+|+|+|++|++++||+.+|++|+++..+.++.........+...+..+..+..+++.++
T Consensus 2 ~~~~~~~~~~i~~~d~~g~~~~i~~~N~a~~~~~G~~~~el~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 81 (132)
T 2pr5_A 2 SHMLDHVRVGVVITDPALEDNPIVYVNQGFVQMTGYETEEILGKNCRFLQGKHTDPAEVDNIRTALQNKEPVTVQIQNYK 81 (132)
T ss_dssp ----CCCCCEEEEECTTSTTCCEEEECHHHHHHHSCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEEEEEEC
T ss_pred hhHHhcCCCcEEEEeCCCCCCcEEEECHHHHHHhCcCHHHHcCCChhhhCCCCCCHHHHHHHHHHHHcCCCeEEEEEEEe
Confidence 35789999999999985545689999999999999999999999998887777777667788888888888999999999
Q ss_pred cCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhc
Q 001869 272 KDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (1002)
Q Consensus 272 kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~l~~ 315 (1002)
+||+.+|+.++++|+.+.+ +.+++++++|||++|++|++|+.
T Consensus 82 kdG~~~~~~~~~~~~~~~~--~~~~~~~~~DITe~k~~e~~l~~ 123 (132)
T 2pr5_A 82 KDGTMFWNELNIDPMEIED--KTYFVGIQNDITKQKEYEKLLED 123 (132)
T ss_dssp TTSCEEEEEEEEEEEEETT--EEEEEEEEEECHHHHHHHHHHHH
T ss_pred cCCCeeeeEEEEEeccCCC--eeEEEEEEEeCcHHHHHHHHHHH
Confidence 9999999999999999765 88999999999999999999873
No 261
>1n9l_A PHOT-LOV1, putative blue light receptor; phototropin, flavin, electron transport; HET: FMN; 1.90A {Chlamydomonas reinhardtii} SCOP: d.110.3.6 PDB: 1n9n_A* 1n9o_A*
Probab=99.73 E-value=4.5e-17 Score=151.00 Aligned_cols=109 Identities=60% Similarity=1.125 Sum_probs=101.1
Q ss_pred hcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCcE
Q 001869 197 TFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTP 276 (1002)
Q Consensus 197 ~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~ 276 (1002)
+++++|+++|..+.+|+|+|+|++|++++||+.+|++|+++..+.++.........++..+..+..+.++++.++|||+.
T Consensus 1 ~~~~~i~i~d~~~~~g~i~~~N~a~~~l~Gy~~~e~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~kdG~~ 80 (109)
T 1n9l_A 1 GLRHTFVVADATLPDCPLVYASEGFYAMTGYGPDEVLGHNCRFLQGEGTDPKEVQKIRDAIKKGEACSVRLLNYRKDGTP 80 (109)
T ss_dssp CCSCEEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEEEEEECTTSCE
T ss_pred CCccEEEEEcCCCCCCeEEEEchHHHHHHCcCHHHHcCCCchhcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEcCCCCE
Confidence 36789999997666899999999999999999999999998888888777777888999999999999999999999999
Q ss_pred EEEEEEeeeeecCCCCEEEEEEEEeccch
Q 001869 277 FWNLLTIAPIKDDEGKVLKFIGMQVEVSK 305 (1002)
Q Consensus 277 ~w~~~~~~pi~d~~G~v~~~v~~~~DITe 305 (1002)
+|++++++|++|++|.+.+++++++|||+
T Consensus 81 ~~~~~~~~pi~d~~G~~~~~v~~~~DITe 109 (109)
T 1n9l_A 81 FWNLLTVTPIKTPDGRVSKFVGVQVDVTS 109 (109)
T ss_dssp EEEEEEEEEEECTTSCEEEEEEEEEECCC
T ss_pred EEEEEEEEEEECCCCCEEEEEEEEEeCCC
Confidence 99999999999999999999999999995
No 262
>2pr5_A Blue-light photoreceptor; light-oxygen-voltage, LOV, PER-ARNT-SIM, PAS, flavoprotein, protein; HET: FMN; 1.45A {Bacillus subtilis} PDB: 2pr6_A*
Probab=99.71 E-value=8.3e-17 Score=154.23 Aligned_cols=118 Identities=46% Similarity=0.835 Sum_probs=102.2
Q ss_pred HHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEEe
Q 001869 475 ATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYT 554 (1002)
Q Consensus 475 ~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~~ 554 (1002)
+.++++++++|+++|.+|.+++|+|+|++|++++||+.+|++|+++..+.+++........+...+..+..+..+++.++
T Consensus 2 ~~~~~~~~~~i~~~d~~g~~~~i~~~N~a~~~~~G~~~~el~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 81 (132)
T 2pr5_A 2 SHMLDHVRVGVVITDPALEDNPIVYVNQGFVQMTGYETEEILGKNCRFLQGKHTDPAEVDNIRTALQNKEPVTVQIQNYK 81 (132)
T ss_dssp ----CCCCCEEEEECTTSTTCCEEEECHHHHHHHSCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEEEEEEC
T ss_pred hhHHhcCCCcEEEEeCCCCCCcEEEECHHHHHHhCcCHHHHcCCChhhhCCCCCCHHHHHHHHHHHHcCCCeEEEEEEEe
Confidence 35788999999999997744569999999999999999999999988887887777777788888888889999999999
Q ss_pred cCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCccccccc
Q 001869 555 KSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLR 594 (1002)
Q Consensus 555 kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e~ 594 (1002)
+||+.+|+.+++.|+++++ +.+++++++|||++|+.|+
T Consensus 82 kdG~~~~~~~~~~~~~~~~--~~~~~~~~~DITe~k~~e~ 119 (132)
T 2pr5_A 82 KDGTMFWNELNIDPMEIED--KTYFVGIQNDITKQKEYEK 119 (132)
T ss_dssp TTSCEEEEEEEEEEEEETT--EEEEEEEEEECHHHHHHHH
T ss_pred cCCCeeeeEEEEEeccCCC--eeEEEEEEEeCcHHHHHHH
Confidence 9999999999999998765 8889999999999998643
No 263
>3ue6_A Aureochrome1; PAS/LOV domain, FMN-binding blue-light photoreceptor, signal protein; HET: FMN; 2.75A {Vaucheria frigida} PDB: 3ulf_A*
Probab=99.70 E-value=1.6e-16 Score=157.57 Aligned_cols=140 Identities=40% Similarity=0.721 Sum_probs=119.3
Q ss_pred cccccccccccchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHH
Q 001869 175 SDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIR 254 (1002)
Q Consensus 175 t~~~~~e~~L~~~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~ 254 (1002)
.++++++..+.+....++.++++++++|+++|...++|+|+++|++|++++||+.++++|+++..+.++.........+.
T Consensus 21 ~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~g~i~~~N~~~~~l~G~~~~e~~g~~~~~l~~~~~~~~~~~~~~ 100 (166)
T 3ue6_A 21 DNPSKANRILEDPDYSLVKALQMAQQNFVITDASLPDNPIVYASRGFLTLTGYSLDQILGRNCRFLQGPETDPRAVDKIR 100 (166)
T ss_dssp ----------CCCCCHHHHHHHHTTSCEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHHHHhcCCceEEEEEccCCCCcEEEECHHHHHHhCcCHHHHcCCCHhheeCCCCCHHHHHHHH
Confidence 34566777888888999999999999999999743357799999999999999999999999988888888888888888
Q ss_pred HHHHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhh
Q 001869 255 ETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (1002)
Q Consensus 255 ~~l~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~l~ 314 (1002)
..+..+..+..+++.++++|..+|+.+++.|+.+.+|.+.+++++++|||++|+++...+
T Consensus 101 ~~~~~~~~~~~e~~~~~~~g~~~~~~~~~~~i~~~~g~~~~~~~~~~DITe~k~~~~~~e 160 (166)
T 3ue6_A 101 NAITKGVDTSVCLLNYRQDGTTFWNLFFVAGLRDSKGNIVNYVGVQSKVSEDYAKLLVNE 160 (166)
T ss_dssp HHHHHTCCEEEEEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEECCBCCHHHHHHHHHH
T ss_pred HHHhcCCceEEEEEEEcCCCCEEEEEEEEEeeeCCCCCEEEEEEEEEechHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999877644
No 264
>3rty_A Period circadian protein; PAS domain, signalling, timeless, circadian clock protein; 2.85A {Drosophila melanogaster} PDB: 1wa9_A 3gec_A
Probab=99.70 E-value=1.5e-16 Score=177.29 Aligned_cols=108 Identities=7% Similarity=0.017 Sum_probs=94.7
Q ss_pred cccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCc-----EEEEEEEEecC
Q 001869 482 EKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD-----VTVQLINYTKS 556 (1002)
Q Consensus 482 ~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~-----~~~e~~~~~kd 556 (1002)
.+.++..+.+|. ++|+|+++..++||+++|++|+++..++||++.....+.++..+..|.. ...+++++++|
T Consensus 154 ~~fi~r~~~dG~---~~yvn~~~~~lLGY~peELiG~s~~~~vHPdD~~~~~~~~~~~l~~G~~~~~~~~s~~yR~~~kd 230 (339)
T 3rty_A 154 PKFAIRHTATGI---ISHVDSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQN 230 (339)
T ss_dssp CEEEEEEETTCB---EEEECTTHHHHHCCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHHHHTTSTTCCCBCCCEEEECTT
T ss_pred ceEEEEECCCCe---EEEcChhhhcccCCCHHHHcCCcHHHEECHHHHHHHHHHHHHHHHcCCcccccccceEEEEEccC
Confidence 567888898766 9999999999999999999999999999999988888888888877664 35789999999
Q ss_pred CCEEEEEEEEEeeeCC-CCCEEEEEEEEecCCccccc
Q 001869 557 GNKFWNLFHLQPMRDQ-KGEVQYFIGVQLDGSEHLEP 592 (1002)
Q Consensus 557 G~~~wv~~~~~pi~d~-~G~v~~~vgi~~DITerk~~ 592 (1002)
|+.+|++.+..+++|. .+++.+++|+-+.|+.....
T Consensus 231 G~~vWlet~~~~~~np~s~~~~~II~~h~vi~~p~~~ 267 (339)
T 3rty_A 231 GCYVLLETEWTSFVNPWSRKLEFVVGHHRVFQGPKQC 267 (339)
T ss_dssp SCEEEEEEEEEEEECTTTCSEEEEEEEEEEEECCSSS
T ss_pred CCEEEEEEEEEEEECCCCCCeeEEEEEEEECCCCCCC
Confidence 9999999999999986 46778899999998887653
No 265
>1n9l_A PHOT-LOV1, putative blue light receptor; phototropin, flavin, electron transport; HET: FMN; 1.90A {Chlamydomonas reinhardtii} SCOP: d.110.3.6 PDB: 1n9n_A* 1n9o_A*
Probab=99.70 E-value=2.3e-16 Score=146.25 Aligned_cols=108 Identities=45% Similarity=0.913 Sum_probs=98.8
Q ss_pred ccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCCEE
Q 001869 481 IEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGNKF 560 (1002)
Q Consensus 481 ~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG~~~ 560 (1002)
++++|+++|....+++|+|+|++|++++||+.+|++|+++..+.+++........++.++..+..+..+++.++|||+.+
T Consensus 2 ~~~~i~i~d~~~~~g~i~~~N~a~~~l~Gy~~~e~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~kdG~~~ 81 (109)
T 1n9l_A 2 LRHTFVVADATLPDCPLVYASEGFYAMTGYGPDEVLGHNCRFLQGEGTDPKEVQKIRDAIKKGEACSVRLLNYRKDGTPF 81 (109)
T ss_dssp CSCEEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEEEEEECTTSCEE
T ss_pred CccEEEEEcCCCCCCeEEEEchHHHHHHCcCHHHHcCCCchhcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEcCCCCEE
Confidence 57899999964334559999999999999999999999988888888777778889999999999999999999999999
Q ss_pred EEEEEEEeeeCCCCCEEEEEEEEecCCc
Q 001869 561 WNLFHLQPMRDQKGEVQYFIGVQLDGSE 588 (1002)
Q Consensus 561 wv~~~~~pi~d~~G~v~~~vgi~~DITe 588 (1002)
|+++++.|++|++|++.+++++++|||+
T Consensus 82 ~~~~~~~pi~d~~G~~~~~v~~~~DITe 109 (109)
T 1n9l_A 82 WNLLTVTPIKTPDGRVSKFVGVQVDVTS 109 (109)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEECCC
T ss_pred EEEEEEEEEECCCCCEEEEEEEEEeCCC
Confidence 9999999999999999999999999996
No 266
>4hia_A LOV protein; PAS, HTH, signaling protein; HET: FMN; 1.95A {Rhodobacter sphaeroides} PDB: 4hnb_A* 4hj4_A* 4hj6_A* 4hj3_A*
Probab=99.70 E-value=2.3e-16 Score=158.80 Aligned_cols=127 Identities=28% Similarity=0.506 Sum_probs=116.7
Q ss_pred hHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEEE
Q 001869 187 VSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGR 266 (1002)
Q Consensus 187 ~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e 266 (1002)
..+.|+.++++++++|+++|....+|+|+++|++|++++||+.++++|+++..+.++.........+...+..+..+..+
T Consensus 5 ~~~~~~~~~~~~~~~i~~~d~~~~~g~i~~~N~a~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 84 (176)
T 4hia_A 5 QFEKIRAVFDRSGVALTLVDMSLPEQPVVLANPPFLRMTGYTEGQILGFNCRFLQRGDENAQARADIRDALKLGRELQVV 84 (176)
T ss_dssp HHHHHHHHHHHCSSCCEEEETTSTTCCEEEECHHHHHHHTCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHhcCCCcEEEEecCCCCCcEEEECHHHHHHHCcCHHHHcCCCcceeeCCCCCHHHHHHHHHHHHcCCceEEE
Confidence 44678999999999999999842238899999999999999999999999998888888888888899999999999999
Q ss_pred EEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHh
Q 001869 267 LLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDK 313 (1002)
Q Consensus 267 ~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~l 313 (1002)
++.+++||..+|+.+++.|+.|.+|.+.+++++++|||++|++|+++
T Consensus 85 ~~~~~~dG~~~~~~~~~~pi~~~~g~~~~~~~~~~DITe~k~~e~~~ 131 (176)
T 4hia_A 85 LRNYRANDEPFDNLLFLHPVGGRPDAPDYFLGSQFELGRSGNSEEAA 131 (176)
T ss_dssp EEEECTTCCEEEEEEEEEEESSBTTBCSEEEEEEEEESSSGGGHHHH
T ss_pred EEEEcCCCCEEEEEEEEEEeeCCCCCeEEEEEEEEECcHhhHHHHHH
Confidence 99999999999999999999999999999999999999999999884
No 267
>4hia_A LOV protein; PAS, HTH, signaling protein; HET: FMN; 1.95A {Rhodobacter sphaeroides} PDB: 4hnb_A* 4hj4_A* 4hj6_A* 4hj3_A*
Probab=99.68 E-value=3.1e-16 Score=157.91 Aligned_cols=119 Identities=28% Similarity=0.506 Sum_probs=112.1
Q ss_pred HHHHHHhccccEEEEcCC---CCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEE
Q 001869 474 LATTLERIEKNFVITDPR---LPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQL 550 (1002)
Q Consensus 474 l~~i~e~~~~~I~i~D~~---G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~ 550 (1002)
|+.++++++++|+++|.+ |. |+++|++|++++||+.++++|+++..+.+++........+...+..+..+..++
T Consensus 9 ~~~~~~~~~~~i~~~d~~~~~g~---i~~~N~a~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 85 (176)
T 4hia_A 9 IRAVFDRSGVALTLVDMSLPEQP---VVLANPPFLRMTGYTEGQILGFNCRFLQRGDENAQARADIRDALKLGRELQVVL 85 (176)
T ss_dssp HHHHHHHCSSCCEEEETTSTTCC---EEEECHHHHHHHTCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHhcCCCcEEEEecCCCCCc---EEEECHHHHHHHCcCHHHHcCCCcceeeCCCCCHHHHHHHHHHHHcCCceEEEE
Confidence 899999999999999997 66 999999999999999999999998888888888888888999999999999999
Q ss_pred EEEecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCcccccccc
Q 001869 551 INYTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRN 595 (1002)
Q Consensus 551 ~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e~~ 595 (1002)
+..++||+.+|+.+++.|+++.+|.+.+++++++|||++|+.|++
T Consensus 86 ~~~~~dG~~~~~~~~~~pi~~~~g~~~~~~~~~~DITe~k~~e~~ 130 (176)
T 4hia_A 86 RNYRANDEPFDNLLFLHPVGGRPDAPDYFLGSQFELGRSGNSEEA 130 (176)
T ss_dssp EEECTTCCEEEEEEEEEEESSBTTBCSEEEEEEEEESSSGGGHHH
T ss_pred EEEcCCCCEEEEEEEEEEeeCCCCCeEEEEEEEEECcHhhHHHHH
Confidence 999999999999999999999999999999999999999997654
No 268
>3p7n_A Sensor histidine kinase; LOV domain, light-activated transcription factor, DNA bindin; HET: FMN; 2.10A {Erythrobacter litoralis}
Probab=99.68 E-value=3e-16 Score=169.25 Aligned_cols=137 Identities=37% Similarity=0.603 Sum_probs=110.9
Q ss_pred ccccccccccccchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHH
Q 001869 174 MSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKI 253 (1002)
Q Consensus 174 it~~~~~e~~L~~~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i 253 (1002)
+.....++++++++++.|+.++++++++|+++|..+.+|+|+|+|++|++++||+.+|++|+++..+.++.........+
T Consensus 48 ~~~~~~~~~~l~~~~~~~~~i~~~~~~~i~~~d~~~~~g~i~~~N~a~~~l~G~~~~el~g~~~~~l~~~~~~~~~~~~~ 127 (258)
T 3p7n_A 48 APGADDTRVEVQPPAQWVLDLIEASPIASVVSDPRLADNPLIAINQAFTDLTGYSEEECVGRNCRFLAGSGTEPWLTDKI 127 (258)
T ss_dssp -------------CCHHHHHHHHTCSSEEEEECTTSTTCCEEEECHHHHHHHCCCGGGTTTSCGGGGCCTTCCHHHHHHH
T ss_pred CCcchhhHHHHHhHHHHHHHHHhcCCccEEEEcCCCCCCcEEEEhHHHHHHcCCCHHHHCCCChhhccCCCCchhHHHHH
Confidence 34445566778899999999999999999999985556779999999999999999999999999999988888888889
Q ss_pred HHHHHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHH
Q 001869 254 RETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGA 310 (1002)
Q Consensus 254 ~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e 310 (1002)
...+..+..+..+++.+++||..+|+.+++.|++|.+|.+.+++++++|||++|+.+
T Consensus 128 ~~~l~~~~~~~~e~~~~~~dG~~~~~~~~~~pi~d~~g~~~~~v~~~~DITerk~~~ 184 (258)
T 3p7n_A 128 RQGVREHKPVLVEILNYKKDGTPFRNAVLVAPIYDDDDELLYFLGSQVEVDDDQPNM 184 (258)
T ss_dssp HHHHHHTCCEEEEEEEECTTSCEEEEEEEEEEEECTTSCSEEEEEEEEEC-------
T ss_pred HHHHHcCCCeEEEEEEEcCCCCEEEEeeEEEEEEcCCCCEEEEEEEeeecchhhhhh
Confidence 999999999999999999999999999999999999999999999999999995433
No 269
>3f1p_B ARYL hydrocarbon receptor nuclear translocator; PAS domain, heterodimer, internal cavity, activator, angiogenesis, congenital erythrocytosis; 1.17A {Homo sapiens} SCOP: d.110.3.0 PDB: 3f1o_B* 3f1n_B 3h7w_B* 3h82_B* 1x0o_A 2hv1_A 4h6j_B 2b02_A* 2k7s_A 2a24_B
Probab=99.67 E-value=1.4e-16 Score=149.80 Aligned_cols=115 Identities=12% Similarity=0.165 Sum_probs=100.9
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHh-cCCcEEEEEEE
Q 001869 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAID-NQTDVTVQLIN 552 (1002)
Q Consensus 474 l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~-~~~~~~~e~~~ 552 (1002)
+..+++++++.|+++|.+|+ |+|+|+++++++||+++|++|+++..++||++.......+...+. .+..+..|+++
T Consensus 4 ~~ll~e~~~d~i~~~d~~g~---i~~~n~~~~~~~G~~~~el~g~~~~~~i~p~d~~~~~~~~~~~~~~~~~~~~~e~r~ 80 (121)
T 3f1p_B 4 KGLNVCQPTRFISRHNIEGI---FTFVDHRCVATVGYQPQELLGKNIVEFCHPEDQQLLRDSFQQVVKLKGQVLSVMFRF 80 (121)
T ss_dssp ----CCCCCEEEEEECTTSB---EEEECTTHHHHHSCCGGGTTTSBGGGGBCTTTHHHHHHHHHHHTTSTTCCEEEEEEE
T ss_pred ccceecCCCceEEEECCCce---EEEECcchhhhhCCChHHHcCCCHHHeECHHHHHHHHHHHHHHHhcCCCcccEEEEE
Confidence 45678999999999999777 999999999999999999999999999999998888888877774 55578999999
Q ss_pred EecCCCEEEEEEEEEeeeCC-CCCEEEEEEEEecCCcccc
Q 001869 553 YTKSGNKFWNLFHLQPMRDQ-KGEVQYFIGVQLDGSEHLE 591 (1002)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~d~-~G~v~~~vgi~~DITerk~ 591 (1002)
+++||+.+|++.+..|++|. +|++.+++|+.+|||++|+
T Consensus 81 ~~~dG~~~w~~~~~~~~~~~~~g~~~~iv~~~~DIT~~kq 120 (121)
T 3f1p_B 81 RSKNQEWLWMRTSSFTFQNPYSDEIEYIICTNTNVKNSSQ 120 (121)
T ss_dssp ECTTSCEEEEEEEEEEECCTTCCCCCEEEEEEEECCCC--
T ss_pred EecCCCEEEEEEEEEEEECCCCCceeEEEEEeEEcccccC
Confidence 99999999999999999987 8899999999999999986
No 270
>3mr0_A Sensory box histidine kinase/response regulator; PAS fold, structural genomics, PSI-2; HET: PG5; 1.49A {Burkholderia thailandensis}
Probab=99.67 E-value=2.4e-16 Score=153.41 Aligned_cols=131 Identities=15% Similarity=0.195 Sum_probs=112.6
Q ss_pred ccccchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCC--CCCcCCCCCCChHHHHHHHHHHHc
Q 001869 182 KGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGR--NCRFLQGAGTDPEDVAKIRETLQN 259 (1002)
Q Consensus 182 ~~L~~~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~--~~~~l~~~~~~~~~~~~i~~~l~~ 259 (1002)
.+|+++++.|+.+++++++++|.+|. ++.++++|+++++++||+++++.+. .+..++||++.......+...+..
T Consensus 2 ~aL~~se~rl~~~~~~~~~g~w~~d~---~~~~~~~s~~~~~~~G~~~~~~~~~~~~~~~~ihpdD~~~~~~~~~~~~~~ 78 (142)
T 3mr0_A 2 NALSASEERFQLAVSGASAGLWDWNP---KTGAMYLSPHFKKIMGYEDHELPDEITGHRESIHPDDRARVLAALKAHLEH 78 (142)
T ss_dssp -------CCHHHHHHHTTCEEEEECT---TTCCEEECHHHHHHTTCCGGGSCSEEC---CCBCTTTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCcEEEEEEc---CCCeEEECHHHHHHhCCCccccCCCHHHHHhhcCHHHHHHHHHHHHHHHhC
Confidence 46788889999999999999999998 6669999999999999999998773 345678888888888888888998
Q ss_pred CCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhc
Q 001869 260 GQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (1002)
Q Consensus 260 g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~l~~ 315 (1002)
+..+..+++++++||..+|+.....|++|.+|.+.+++|+++|||++|++|++|+.
T Consensus 79 ~~~~~~e~r~~~~~G~~~w~~~~~~~~~d~~g~~~~~~G~~~DITerk~~E~~L~~ 134 (142)
T 3mr0_A 79 RDTYDVEYRVRTRSGDFRWIQSRGQALWNSAGEPYRMVGWIMDVTDRKRDEDALRV 134 (142)
T ss_dssp CCCEEEEEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHHHHHHHHH
T ss_pred CCceEEEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEcCchHHHHHHHHHH
Confidence 98999999999999999999999999999999999999999999999999999874
No 271
>3t50_A Blue-light-activated histidine kinase; PAS superfamily, blue-light photoreceptor, FMN binding, TRAN; HET: FMN; 1.64A {Brucella melitensis}
Probab=99.65 E-value=1e-15 Score=144.57 Aligned_cols=121 Identities=36% Similarity=0.690 Sum_probs=106.1
Q ss_pred HHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEecC
Q 001869 194 ALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKD 273 (1002)
Q Consensus 194 ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kd 273 (1002)
++++++++|+++|..+++|+|+++|++|++++||+.++++|+++..+.++.........+...+..+..+..+++..+++
T Consensus 2 ~~~~~~~~i~~~d~~~~~g~i~~~N~~~~~l~g~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 81 (128)
T 3t50_A 2 ASEFTLMPMLITNPHLPDNPIVFANPAFLKLTGYEADEVMGRNCRFLQGHGTDPAHVRAIKSAIAAEKPIDIDIINYKKS 81 (128)
T ss_dssp CCCCCSSCEEEECTTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEEECTT
T ss_pred ccccCcccEEEecCCCCCCcEEEEcHHHHHHhCcCHHHHcCCCHhhhcCCccCHHHHHHHHHHHHcCCCceeEEEEEcCC
Confidence 46789999999997444677999999999999999999999999888888888888888889999999999999999999
Q ss_pred CcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhh
Q 001869 274 GTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (1002)
Q Consensus 274 G~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~l~ 314 (1002)
|..+|+.+++.|+.+.+|.+.+++++++|||++|++|++..
T Consensus 82 g~~~~~~~~~~~i~~~~g~~~~~~~~~~DITe~k~~e~~~~ 122 (128)
T 3t50_A 82 GEAFWNRLHISPVHNANGRLQHFVSSQLDVTLELVPRGSLE 122 (128)
T ss_dssp CCEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHC------
T ss_pred CCEEEEEEEEEEEECCCCCEEEEEEEEEEcchhhhhhhhhh
Confidence 99999999999999999999999999999999999998865
No 272
>3p7n_A Sensor histidine kinase; LOV domain, light-activated transcription factor, DNA bindin; HET: FMN; 2.10A {Erythrobacter litoralis}
Probab=99.65 E-value=6.1e-16 Score=166.82 Aligned_cols=133 Identities=35% Similarity=0.595 Sum_probs=107.0
Q ss_pred hhHHHHHHHhhc-ccHHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHH
Q 001869 460 DDKVRQKEMRKG-IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRA 538 (1002)
Q Consensus 460 ~~~~~~~~l~~~-~~l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~ 538 (1002)
.+...++++++. ..|+.++++++++|+++|..|.+++|++||++|++++||+++|++|+++..+.++++.......+..
T Consensus 50 ~~~~~~~~l~~~~~~~~~i~~~~~~~i~~~d~~~~~g~i~~~N~a~~~l~G~~~~el~g~~~~~l~~~~~~~~~~~~~~~ 129 (258)
T 3p7n_A 50 GADDTRVEVQPPAQWVLDLIEASPIASVVSDPRLADNPLIAINQAFTDLTGYSEEECVGRNCRFLAGSGTEPWLTDKIRQ 129 (258)
T ss_dssp -----------CCHHHHHHHHTCSSEEEEECTTSTTCCEEEECHHHHHHHCCCGGGTTTSCGGGGCCTTCCHHHHHHHHH
T ss_pred cchhhHHHHHhHHHHHHHHHhcCCccEEEEcCCCCCCcEEEEhHHHHHHcCCCHHHHCCCChhhccCCCCchhHHHHHHH
Confidence 344555556554 5599999999999999999332333999999999999999999999999989999988888888999
Q ss_pred HHhcCCcEEEEEEEEecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCccccc
Q 001869 539 AIDNQTDVTVQLINYTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEP 592 (1002)
Q Consensus 539 ~l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~ 592 (1002)
.+..+..+..+.+.+++||+.+|+.+++.|++|.+|.+.+++++++|||++|+.
T Consensus 130 ~l~~~~~~~~e~~~~~~dG~~~~~~~~~~pi~d~~g~~~~~v~~~~DITerk~~ 183 (258)
T 3p7n_A 130 GVREHKPVLVEILNYKKDGTPFRNAVLVAPIYDDDDELLYFLGSQVEVDDDQPN 183 (258)
T ss_dssp HHHHTCCEEEEEEEECTTSCEEEEEEEEEEEECTTSCSEEEEEEEEEC------
T ss_pred HHHcCCCeEEEEEEEcCCCCEEEEeeEEEEEEcCCCCEEEEEEEeeecchhhhh
Confidence 999999999999999999999999999999999999999999999999999643
No 273
>3ue6_A Aureochrome1; PAS/LOV domain, FMN-binding blue-light photoreceptor, signal protein; HET: FMN; 2.75A {Vaucheria frigida} PDB: 3ulf_A*
Probab=99.64 E-value=7.5e-16 Score=152.66 Aligned_cols=129 Identities=47% Similarity=0.809 Sum_probs=112.4
Q ss_pred HHHHHHHhhc-ccHHHHHHhccccEEEEcC---CCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHH
Q 001869 462 KVRQKEMRKG-IDLATTLERIEKNFVITDP---RLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIR 537 (1002)
Q Consensus 462 ~~~~~~l~~~-~~l~~i~e~~~~~I~i~D~---~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~ 537 (1002)
...+++++.. ..|+.++++++++|+++|. +|. |+++|++|++++||+.++++|+++..+.+++........+.
T Consensus 24 ~~~~~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~g~---i~~~N~~~~~l~G~~~~e~~g~~~~~l~~~~~~~~~~~~~~ 100 (166)
T 3ue6_A 24 SKANRILEDPDYSLVKALQMAQQNFVITDASLPDNP---IVYASRGFLTLTGYSLDQILGRNCRFLQGPETDPRAVDKIR 100 (166)
T ss_dssp -------CCCCCHHHHHHHHTTSCEEEEETTSTTCC---EEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhcCCceEEEEEccCCCCc---EEEECHHHHHHhCcCHHHHcCCCHhheeCCCCCHHHHHHHH
Confidence 4445555444 5589999999999999998 577 99999999999999999999999888888888888888888
Q ss_pred HHHhcCCcEEEEEEEEecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCcccccc
Q 001869 538 AAIDNQTDVTVQLINYTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (1002)
Q Consensus 538 ~~l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e 593 (1002)
..+..+..+..++...+++|..+|+.+++.|+++.+|.+.+++++++|||++|+++
T Consensus 101 ~~~~~~~~~~~e~~~~~~~g~~~~~~~~~~~i~~~~g~~~~~~~~~~DITe~k~~~ 156 (166)
T 3ue6_A 101 NAITKGVDTSVCLLNYRQDGTTFWNLFFVAGLRDSKGNIVNYVGVQSKVSEDYAKL 156 (166)
T ss_dssp HHHHHTCCEEEEEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEECCBCCHHHHHH
T ss_pred HHHhcCCceEEEEEEEcCCCCEEEEEEEEEeeeCCCCCEEEEEEEEEechHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999753
No 274
>3f1p_A Endothelial PAS domain-containing protein 1; PAS domain, heterodimer, internal cavity, activator, angiogenesis, congenital erythrocytosis; 1.17A {Homo sapiens} SCOP: d.110.3.7 PDB: 3f1o_A* 3f1n_A 3h7w_A* 3h82_A* 1p97_A 2a24_A 4h6j_A
Probab=99.64 E-value=4.3e-16 Score=145.45 Aligned_cols=109 Identities=17% Similarity=0.129 Sum_probs=101.4
Q ss_pred hccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCCE
Q 001869 480 RIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGNK 559 (1002)
Q Consensus 480 ~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG~~ 559 (1002)
++++.|+++|.+|+ |+|+|+++++++||+++|++|+++..++||++.......+...+..+..+..+++++++||+.
T Consensus 7 ~~~~~i~~~d~~g~---i~~~n~~~~~~~Gy~~~el~g~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~e~r~~~~dG~~ 83 (117)
T 3f1p_A 7 DSKTFLSEHSMDMK---FTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGY 83 (117)
T ss_dssp GGGEEEEEECTTCB---EEEECTHHHHHHCCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHHHHSEEECCCEEEECTTSSE
T ss_pred CCccEEEEECCCce---EEEECcChhhhhCCCHHHHcCCchhheECHHHHHHHHHHHHHHHhCCCeeeeEEEEEecCCCE
Confidence 45789999999777 999999999999999999999999999999998888888888888888888899999999999
Q ss_pred EEEEEEEEeeeCC-CCCEEEEEEEEecCCcccc
Q 001869 560 FWNLFHLQPMRDQ-KGEVQYFIGVQLDGSEHLE 591 (1002)
Q Consensus 560 ~wv~~~~~pi~d~-~G~v~~~vgi~~DITerk~ 591 (1002)
+|+++++.|++|+ +|.+.+++++.+|||++|+
T Consensus 84 ~w~~~~~~~~~d~~~g~~~~iv~~~~DITer~~ 116 (117)
T 3f1p_A 84 VWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEK 116 (117)
T ss_dssp EEEEEEEEEEEETTTTEEEEEEEEEEECSCCBC
T ss_pred EEEEEeeEEEECCCCCCceEEEEEeeecccccc
Confidence 9999999999998 8999999999999999986
No 275
>3ewk_A Sensor protein; PAS domain, alpha/beta fold, kinase, phosphoprotein, transfe flavoprotein; HET: FAD; 2.34A {Methylococcus capsulatus}
Probab=99.64 E-value=8.8e-16 Score=162.34 Aligned_cols=129 Identities=24% Similarity=0.503 Sum_probs=118.6
Q ss_pred cccccccccccccccccccchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCC
Q 001869 167 SVRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTD 246 (1002)
Q Consensus 167 ~~~~~~dit~~~~~e~~L~~~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~ 246 (1002)
.+...+|||++++++++| ..++.++++++++|+++|. +|+|+++|++|++++||+.+|++|+++..+.++...
T Consensus 93 ~~~~~~DIT~~k~~e~~l----~~~~~~~~~~~~~i~~~d~---~g~i~~~N~~~~~~~G~~~~e~~g~~~~~l~~~~~~ 165 (227)
T 3ewk_A 93 YISIRRDITAQKEAEAQL----ARLKQAMDANSEMILLTDR---AGRIIYANPALCRFSGMAEGELLGQSPSILDSPLAD 165 (227)
T ss_dssp EEEEEEECTTTTHHHHHH----HHHHHHHHTCCSEEEEECT---TSCEEEECHHHHHHHTCCTHHHHSSCGGGGBCTTSC
T ss_pred EEEEEEehhhHHHHHHHH----HHHHHHHhcCcCeEEEEcC---CCcEEEEchHHHHHhCCCHHHHcCCChhhccCCCCC
Confidence 445559999999998877 4567789999999999998 888999999999999999999999999988888888
Q ss_pred hHHHHHHHHHHHcCCcEEEEEEEEecCCc------EEEEEEEeeeeecCCCCEEEEEEEEec
Q 001869 247 PEDVAKIRETLQNGQSYCGRLLNYKKDGT------PFWNLLTIAPIKDDEGKVLKFIGMQVE 302 (1002)
Q Consensus 247 ~~~~~~i~~~l~~g~~~~~e~~~~~kdG~------~~w~~~~~~pi~d~~G~v~~~v~~~~D 302 (1002)
......++..+..+..+.++++.++|+|. .+|++++++|++|.+|.+.+++++++|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~e~~~~~k~G~~~~dg~~~~~~~~~~pi~d~~g~~~~~v~i~~D 227 (227)
T 3ewk_A 166 QETLAAMQEALQAGQPWSGRLLNRRRTGPAPHDAEDYWAEISTTPIHTDGNGLVGYVQIQHD 227 (227)
T ss_dssp HHHHHHHHHHHHHTCCEECCEEEEEECCSSSSCEEEEEEEEEEEEEECSSSCEEEEEEEEEC
T ss_pred HHHHHHHHHHHHcCCceeEEEEEECCCCCcCcccceEEEEEEEEEEECCCCCEEEEEEEecC
Confidence 88899999999999999999999999997 899999999999999999999999988
No 276
>3mr0_A Sensory box histidine kinase/response regulator; PAS fold, structural genomics, PSI-2; HET: PG5; 1.49A {Burkholderia thailandensis}
Probab=99.64 E-value=1.6e-15 Score=147.59 Aligned_cols=120 Identities=15% Similarity=0.223 Sum_probs=108.9
Q ss_pred ccHHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCC--CCccccCCCCCHHHHHHHHHHHhcCCcEEEE
Q 001869 472 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGR--NCRFLQGPETDPATVRKIRAAIDNQTDVTVQ 549 (1002)
Q Consensus 472 ~~l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk--~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e 549 (1002)
..|+.+++.+++++|.+|..+. ++++|+++++++||+.+++.+. .+..++||++...+...+..++..+..+..|
T Consensus 9 ~rl~~~~~~~~~g~w~~d~~~~---~~~~s~~~~~~~G~~~~~~~~~~~~~~~~ihpdD~~~~~~~~~~~~~~~~~~~~e 85 (142)
T 3mr0_A 9 ERFQLAVSGASAGLWDWNPKTG---AMYLSPHFKKIMGYEDHELPDEITGHRESIHPDDRARVLAALKAHLEHRDTYDVE 85 (142)
T ss_dssp CCHHHHHHHTTCEEEEECTTTC---CEEECHHHHHHTTCCGGGSCSEEC---CCBCTTTHHHHHHHHHHHHHHCCCEEEE
T ss_pred HHHHHHHHhCCcEEEEEEcCCC---eEEECHHHHHHhCCCccccCCCHHHHHhhcCHHHHHHHHHHHHHHHhCCCceEEE
Confidence 5599999999999999999777 9999999999999999998873 3567889999888888899999999999999
Q ss_pred EEEEecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCccccccc
Q 001869 550 LINYTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLR 594 (1002)
Q Consensus 550 ~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e~ 594 (1002)
++++++||+.+|+...+.|++|.+|.+.+++|+++|||++|++|.
T Consensus 86 ~r~~~~~G~~~w~~~~~~~~~d~~g~~~~~~G~~~DITerk~~E~ 130 (142)
T 3mr0_A 86 YRVRTRSGDFRWIQSRGQALWNSAGEPYRMVGWIMDVTDRKRDED 130 (142)
T ss_dssp EEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHHHHH
T ss_pred EEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEcCchHHHHHH
Confidence 999999999999999999999999999999999999999998754
No 277
>3f1p_B ARYL hydrocarbon receptor nuclear translocator; PAS domain, heterodimer, internal cavity, activator, angiogenesis, congenital erythrocytosis; 1.17A {Homo sapiens} SCOP: d.110.3.0 PDB: 3f1o_B* 3f1n_B 3h7w_B* 3h82_B* 1x0o_A 2hv1_A 4h6j_B 2b02_A* 2k7s_A 2a24_B
Probab=99.64 E-value=4.1e-16 Score=146.68 Aligned_cols=116 Identities=9% Similarity=0.109 Sum_probs=99.8
Q ss_pred HHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHH-cCCcEEEEEE
Q 001869 190 IVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQ-NGQSYCGRLL 268 (1002)
Q Consensus 190 ~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~-~g~~~~~e~~ 268 (1002)
++..+++++++.|++.|. +|+|+|+|+++++++||+++|++|+++..+++|++.......+...+. .+..+..+++
T Consensus 3 ~~~ll~e~~~d~i~~~d~---~g~i~~~n~~~~~~~G~~~~el~g~~~~~~i~p~d~~~~~~~~~~~~~~~~~~~~~e~r 79 (121)
T 3f1p_B 3 FKGLNVCQPTRFISRHNI---EGIFTFVDHRCVATVGYQPQELLGKNIVEFCHPEDQQLLRDSFQQVVKLKGQVLSVMFR 79 (121)
T ss_dssp -----CCCCCEEEEEECT---TSBEEEECTTHHHHHSCCGGGTTTSBGGGGBCTTTHHHHHHHHHHHTTSTTCCEEEEEE
T ss_pred cccceecCCCceEEEECC---CceEEEECcchhhhhCCChHHHcCCCHHHeECHHHHHHHHHHHHHHHhcCCCcccEEEE
Confidence 345678999999999998 888999999999999999999999999888999887777777777774 4557889999
Q ss_pred EEecCCcEEEEEEEeeeeecC-CCCEEEEEEEEeccchhhH
Q 001869 269 NYKKDGTPFWNLLTIAPIKDD-EGKVLKFIGMQVEVSKHTE 308 (1002)
Q Consensus 269 ~~~kdG~~~w~~~~~~pi~d~-~G~v~~~v~~~~DITerk~ 308 (1002)
++++||+.+|++.+..|++|. +|.+.+++++++|||++|+
T Consensus 80 ~~~~dG~~~w~~~~~~~~~~~~~g~~~~iv~~~~DIT~~kq 120 (121)
T 3f1p_B 80 FRSKNQEWLWMRTSSFTFQNPYSDEIEYIICTNTNVKNSSQ 120 (121)
T ss_dssp EECTTSCEEEEEEEEEEECCTTCCCCCEEEEEEEECCCC--
T ss_pred EEecCCCEEEEEEEEEEEECCCCCceeEEEEEeEEcccccC
Confidence 999999999999999999987 7889999999999999886
No 278
>3t50_A Blue-light-activated histidine kinase; PAS superfamily, blue-light photoreceptor, FMN binding, TRAN; HET: FMN; 1.64A {Brucella melitensis}
Probab=99.62 E-value=2.7e-15 Score=141.63 Aligned_cols=117 Identities=44% Similarity=0.790 Sum_probs=104.7
Q ss_pred HHHhccccEEEEcC---CCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001869 477 TLERIEKNFVITDP---RLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (1002)
Q Consensus 477 i~e~~~~~I~i~D~---~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~ 553 (1002)
++++++++|+++|. +|. |+++|++|++++||+.++++|+++..+.+++........+...+..+..+..+.+..
T Consensus 2 ~~~~~~~~i~~~d~~~~~g~---i~~~N~~~~~l~g~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 78 (128)
T 3t50_A 2 ASEFTLMPMLITNPHLPDNP---IVFANPAFLKLTGYEADEVMGRNCRFLQGHGTDPAHVRAIKSAIAAEKPIDIDIINY 78 (128)
T ss_dssp CCCCCSSCEEEECTTSTTCC---EEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred ccccCcccEEEecCCCCCCc---EEEEcHHHHHHhCcCHHHHcCCCHhhhcCCccCHHHHHHHHHHHHcCCCceeEEEEE
Confidence 46788999999999 666 999999999999999999999998888888888888888889999999999999999
Q ss_pred ecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCccccccccC
Q 001869 554 TKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNS 596 (1002)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e~~~ 596 (1002)
+++|..+|+.+++.|+++.+|.+.+++++++|||++|++++..
T Consensus 79 ~~~g~~~~~~~~~~~i~~~~g~~~~~~~~~~DITe~k~~e~~~ 121 (128)
T 3t50_A 79 KKSGEAFWNRLHISPVHNANGRLQHFVSSQLDVTLELVPRGSL 121 (128)
T ss_dssp CTTCCEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHC-----
T ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEEcchhhhhhhhh
Confidence 9999999999999999999999999999999999999976544
No 279
>1d06_A Nitrogen fixation regulatory protein FIXL; oxygen sensor, histidine kinase, PAS, high-resolution, two-C system, signaling protein; HET: HEM; 1.40A {Sinorhizobium meliloti} SCOP: d.110.3.2 PDB: 1ew0_A*
Probab=99.61 E-value=1.1e-15 Score=146.05 Aligned_cols=125 Identities=22% Similarity=0.264 Sum_probs=101.8
Q ss_pred cccccccccccchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHH
Q 001869 175 SDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIR 254 (1002)
Q Consensus 175 t~~~~~e~~L~~~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~ 254 (1002)
|..+.++++|+++++.|+.++++++++|+++|. +|+|+++|++|++++||+.+|++|+++..++++.........+.
T Consensus 2 ~~~~~~e~~l~~~~~~~~~l~~~~~d~i~~~d~---~g~i~~~N~a~~~l~Gy~~~eliG~~~~~l~~~~~~~~~~~~~~ 78 (130)
T 1d06_A 2 SHMLETEDVVRARDAHLRSILDTVPDATVVSAT---DGTIVSFNAAAVRQFGYAEEEVIGQNLRILMPEPYRHEHDGYLQ 78 (130)
T ss_dssp CHHHHHHHHHHHHTSCHHHHHTTCSSEEEEEET---TSBEEEECHHHHHHHCCCHHHHTTSBGGGGSCTTHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhhCcCeEEEECC---CCeEEEEcHHHHHHHCCCHHHHcCCcHHHHCCchhHHHHHHHHH
Confidence 456778888999999999999999999999998 88899999999999999999999999888877655444344444
Q ss_pred HHHHcCCc----EEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccc
Q 001869 255 ETLQNGQS----YCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (1002)
Q Consensus 255 ~~l~~g~~----~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DIT 304 (1002)
.....+.. ...++..++|||+.+|++++++|+.+. ...+++++++|||
T Consensus 79 ~~~~~~~~~~~~~~~e~~~~~kdG~~~~~~~~~~~~~~~--~~~~~~~~~~DIT 130 (130)
T 1d06_A 79 RYMATGEKRIIGIDRVVSGQRKDGSTFPMKLAVGEMRSG--GERFFTGFIRDLT 130 (130)
T ss_dssp HHHHHCCCSSTTSCEEEEEECTTSCEEEEEEEEEEEEET--TEEEEEEEEEECC
T ss_pred HHHhcCCccccCCeeEEEEEeCCCCEEEEEEEEEEEEEC--CeEEEEEEEEECc
Confidence 44444432 234677889999999999999999763 4456899999998
No 280
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.61 E-value=6.1e-16 Score=174.32 Aligned_cols=140 Identities=15% Similarity=0.163 Sum_probs=101.1
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeeccccc------------Ch--hH---HH--HHHHHHHHHHhCCCCC
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML------------NR--NK---VH--RACAEREILDMLDHPF 730 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~------------~~--~~---~~--~~~~E~~il~~l~hpn 730 (1002)
-|.+.+.||.|+||.||+|.+ .+|+.||||+++..... .. .. .. ....|...|.++.+.+
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d-~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVAD-EKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEEC-TTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEecCEeeeCCceEEEEEEC-CCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 389999999999999999998 46999999998643211 00 00 01 1134667777775554
Q ss_pred cceEEEEEEeCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEccCC--
Q 001869 731 VPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-- 808 (1002)
Q Consensus 731 Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g-- 808 (1002)
+....-+.... .+|||||++|++|..+.. . .....++.||+.+|.|||++|||||||||.|||++.+|
T Consensus 175 v~vp~p~~~~~--~~LVME~i~G~~L~~l~~------~--~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~ 244 (397)
T 4gyi_A 175 FPVPEPIAQSR--HTIVMSLVDALPMRQVSS------V--PDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDA 244 (397)
T ss_dssp CSCCCEEEEET--TEEEEECCSCEEGGGCCC------C--SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECS
T ss_pred CCCCeeeeccC--ceEEEEecCCccHhhhcc------c--HHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCc
Confidence 43222111222 379999999998865432 1 23456789999999999999999999999999999776
Q ss_pred --------cEEEEeccCCcc
Q 001869 809 --------HVSLTDFDLSCL 820 (1002)
Q Consensus 809 --------~vkL~DFG~a~~ 820 (1002)
.+.|+||+-+..
T Consensus 245 ~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 245 EDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp SCTTSEEEEEEECCCTTCEE
T ss_pred ccccccccceEEEEeCCccc
Confidence 389999998744
No 281
>3sw1_A Sensory box protein; light-oxygen-voltage, LOV, PAS, signaling protein; HET: FMN; 2.63A {Pseudomonas putida}
Probab=99.61 E-value=7e-15 Score=145.09 Aligned_cols=131 Identities=31% Similarity=0.563 Sum_probs=119.2
Q ss_pred chHHHHHHHHHhcCCcEEEEeCCCCCC---cEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCc
Q 001869 186 RVSDIVKDALSTFQQTFVVSDATKPDY---PIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS 262 (1002)
Q Consensus 186 ~~~~~l~~ile~~~d~i~v~D~~~~dG---~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~ 262 (1002)
.++++++.++++++++|+++|. +| +|+++|++|++++||+.++++|+++..+.++.........+...+..+..
T Consensus 22 ~~~~~~~~i~~~~~~~i~~~d~---~~~~~~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (162)
T 3sw1_A 22 INAQLLQSMVDASNDGIVVAEK---EGDDTILIYVNAAFEYLTGYSRDEILYQDCRFLQGDDRDQLGRARIRKAMAEGRP 98 (162)
T ss_dssp CCHHHHHHHHHTCSSEEEEEEE---ETTEEEEEEECHHHHHHHTCCHHHHTTSBGGGGTTTCCCCHHHHHHHHHHHHTCC
T ss_pred chHHHHHHHHhhccCcEEEEeC---CCCccEEEEECHHHHHHHCCCHHHHcCCCcceecCCCcCHHHHHHHHHHHhcCCC
Confidence 4568899999999999999998 66 89999999999999999999999998888887777777888888999999
Q ss_pred EEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhcCCCC
Q 001869 263 YCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNG 319 (1002)
Q Consensus 263 ~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~l~~~~~~ 319 (1002)
+..++..++++|..+|+.+++.|+.+.+|.+.+++++++|||++|+++++++...+.
T Consensus 99 ~~~~~~~~~~~g~~~~~~~~~~~i~~~~g~~~~~~~~~~DiTe~k~~e~~l~~~~~~ 155 (162)
T 3sw1_A 99 CREVLRNYRKDGSAFWNELSITPVKSDFDQRTYFIGIQKDVSRQVELERELAELRAR 155 (162)
T ss_dssp EEEEEEEECTTCCEEEEEEEEEEEECSSSSCEEEEEEEEECHHHHHHHHHHHHHTC-
T ss_pred CcceEEEECCCCCEEEEEEEEEEeecCCCCEEEEEEEEEeCcHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998865444
No 282
>4eet_B Phototropin-2; LOV, blue light photoreceptor, signaling protein, flavoprote; HET: FMN; 1.20A {Arabidopsis thaliana} PDB: 4ees_A* 4eer_A* 4eep_A* 4eeu_A* 1jnu_A* 1g28_A*
Probab=99.60 E-value=1.1e-14 Score=133.74 Aligned_cols=114 Identities=41% Similarity=0.829 Sum_probs=102.1
Q ss_pred HHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEecC
Q 001869 194 ALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKD 273 (1002)
Q Consensus 194 ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kd 273 (1002)
++++++++|+++|...++|+|+++|++|++++||+.++++|+++..+.++.........+...+..+..+..+++.++++
T Consensus 2 ~l~~~~~~i~~~d~~~~~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (115)
T 4eet_B 2 SPEFIEKNFVITDPRLPDNPIIFASDGFLELTEYSREEILGRNARFLQGPETDQATVQKIRDAIRDQRETTVQLINYTKS 81 (115)
T ss_dssp ---CCCCSEEEECTTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEEECTT
T ss_pred ccccCCCcEEEEcCCCCCCcEEEEcHHHHHHHCcCHHHHhCCCHHHhcCCCCChHHHHHHHHHHHcCCCcceEEEEecCC
Confidence 47889999999997433566999999999999999999999999888888888888888889999999999999999999
Q ss_pred CcEEEEEEEeeeeecCCCCEEEEEEEEeccchhh
Q 001869 274 GTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHT 307 (1002)
Q Consensus 274 G~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk 307 (1002)
|..+|+.+++.|+.+.+|.+.+++++++|||+++
T Consensus 82 g~~~~~~~~~~~~~~~~g~~~~~~~~~~DITer~ 115 (115)
T 4eet_B 82 GKKFWNLLHLQPVRDQKGELQYFIGVQLDGSDHV 115 (115)
T ss_dssp CCEEEEEEEEEEEECTTSCEEEEEEEEEECSCCC
T ss_pred CCEEEEEEEEEEEECCCCCEEEEEEEEEeecccC
Confidence 9999999999999999999999999999999874
No 283
>4eet_B Phototropin-2; LOV, blue light photoreceptor, signaling protein, flavoprote; HET: FMN; 1.20A {Arabidopsis thaliana} PDB: 4ees_A* 4eer_A* 4eep_A* 4eeu_A* 1jnu_A* 1g28_A*
Probab=99.60 E-value=1.4e-14 Score=133.05 Aligned_cols=111 Identities=81% Similarity=1.229 Sum_probs=101.9
Q ss_pred HHHhccccEEEEcC---CCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001869 477 TLERIEKNFVITDP---RLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (1002)
Q Consensus 477 i~e~~~~~I~i~D~---~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~ 553 (1002)
.+++++++|+++|. +|+ |+++|++|++++||+.++++|+++..+.+++........+...+..+..+..+.+..
T Consensus 2 ~l~~~~~~i~~~d~~~~~g~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (115)
T 4eet_B 2 SPEFIEKNFVITDPRLPDNP---IIFASDGFLELTEYSREEILGRNARFLQGPETDQATVQKIRDAIRDQRETTVQLINY 78 (115)
T ss_dssp ---CCCCSEEEECTTSTTCC---EEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred ccccCCCcEEEEcCCCCCCc---EEEEcHHHHHHHCcCHHHHhCCCHHHhcCCCCChHHHHHHHHHHHcCCCcceEEEEe
Confidence 46789999999999 777 999999999999999999999998888888888888888889999999999999999
Q ss_pred ecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCccc
Q 001869 554 TKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHL 590 (1002)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk 590 (1002)
+++|+.+|+.++..|+++.+|.+.+++++++|||+++
T Consensus 79 ~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DITer~ 115 (115)
T 4eet_B 79 TKSGKKFWNLLHLQPVRDQKGELQYFIGVQLDGSDHV 115 (115)
T ss_dssp CTTCCEEEEEEEEEEEECTTSCEEEEEEEEEECSCCC
T ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEeecccC
Confidence 9999999999999999999999999999999999985
No 284
>3f1p_A Endothelial PAS domain-containing protein 1; PAS domain, heterodimer, internal cavity, activator, angiogenesis, congenital erythrocytosis; 1.17A {Homo sapiens} SCOP: d.110.3.7 PDB: 3f1o_A* 3f1n_A 3h7w_A* 3h82_A* 1p97_A 2a24_A 4h6j_A
Probab=99.60 E-value=1.4e-15 Score=141.84 Aligned_cols=108 Identities=15% Similarity=0.156 Sum_probs=98.8
Q ss_pred cCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCcEE
Q 001869 198 FQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPF 277 (1002)
Q Consensus 198 ~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~ 277 (1002)
+++.|++.|. +|+|+|+|+++++++||+++|++|+++..+++|++.......+...+..+..+..+++++++||+.+
T Consensus 8 ~~~~i~~~d~---~g~i~~~n~~~~~~~Gy~~~el~g~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~e~r~~~~dG~~~ 84 (117)
T 3f1p_A 8 SKTFLSEHSM---DMKFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYV 84 (117)
T ss_dssp GGEEEEEECT---TCBEEEECTHHHHHHCCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHHHHSEEECCCEEEECTTSSEE
T ss_pred CccEEEEECC---CceEEEECcChhhhhCCCHHHHcCCchhheECHHHHHHHHHHHHHHHhCCCeeeeEEEEEecCCCEE
Confidence 4577888888 8889999999999999999999999998888998888788888888888888888999999999999
Q ss_pred EEEEEeeeeecC-CCCEEEEEEEEeccchhhH
Q 001869 278 WNLLTIAPIKDD-EGKVLKFIGMQVEVSKHTE 308 (1002)
Q Consensus 278 w~~~~~~pi~d~-~G~v~~~v~~~~DITerk~ 308 (1002)
|++++..|+.|+ +|.+.+++++.+|||++|+
T Consensus 85 w~~~~~~~~~d~~~g~~~~iv~~~~DITer~~ 116 (117)
T 3f1p_A 85 WLETQGTVIYNPRNLQPQCIMCVNYVLSEIEK 116 (117)
T ss_dssp EEEEEEEEEEETTTTEEEEEEEEEEECSCCBC
T ss_pred EEEEeeEEEECCCCCCceEEEEEeeecccccc
Confidence 999999999998 7889999999999999986
No 285
>2r78_A Sensor protein; sensory box sensor histidine kinase/response regulator, structural genomics, PSI, MCSG; 1.60A {Geobacter sulfurreducens pca}
Probab=99.60 E-value=1e-14 Score=136.73 Aligned_cols=114 Identities=16% Similarity=0.196 Sum_probs=93.3
Q ss_pred ccccchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCC
Q 001869 182 KGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ 261 (1002)
Q Consensus 182 ~~L~~~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~ 261 (1002)
+.|+++++.|+.++++++++|+++|. +|+|+++|++|++++||+.+|++|+++..+.++.... ........+..+.
T Consensus 4 ~~l~~se~~~~~l~e~~~d~i~~~d~---~g~i~~vN~a~~~l~Gy~~~el~g~~~~~~~~~~~~~-~~~~~~~~~~~~~ 79 (117)
T 2r78_A 4 ENLYFQSNAYRALFEHAIDGIFIMDA---EGHYLDVNPAICSAIGYTRDEFLALDWGVLSRGVDSG-WAAASLARIVGGE 79 (117)
T ss_dssp CSHHHHHHHHHHHHHHCSSEEEEECT---TSBEEEECHHHHHHHCCCHHHHTTCBTTTTTTCSTTS-HHHHHHHHHHTTC
T ss_pred hHHHHhHHHHHHHHhcCCceEEEECC---CCCEEEecHHHHHHHCcCHHHHcCCCHHHhCCccchh-HHHHHHHHHHcCC
Confidence 35788899999999999999999998 8889999999999999999999999877665443322 2334455666777
Q ss_pred cEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccc
Q 001869 262 SYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (1002)
Q Consensus 262 ~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DIT 304 (1002)
.+..+.+.++|||+.+|++++++|+. +|. ++++++|||
T Consensus 80 ~~~~e~~~~~kdG~~~~v~~~~~~~~--~g~---~~~i~~DIT 117 (117)
T 2r78_A 80 PLREERTVWTRNGDQLTVELSAHLLP--DGK---ILGIARDVS 117 (117)
T ss_dssp CEEEEEEEECTTSCEEEEEEEEEECT--TSC---EEEEEEC--
T ss_pred cEEEEEEEEecCCCEEEEEEEEEEec--CCe---EEEEEEeCC
Confidence 78889999999999999999999985 566 678899998
No 286
>1d06_A Nitrogen fixation regulatory protein FIXL; oxygen sensor, histidine kinase, PAS, high-resolution, two-C system, signaling protein; HET: HEM; 1.40A {Sinorhizobium meliloti} SCOP: d.110.3.2 PDB: 1ew0_A*
Probab=99.59 E-value=6.8e-15 Score=140.40 Aligned_cols=124 Identities=16% Similarity=0.204 Sum_probs=99.8
Q ss_pred hhhHHHHHHHhhc-ccHHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHH
Q 001869 459 VDDKVRQKEMRKG-IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIR 537 (1002)
Q Consensus 459 ~~~~~~~~~l~~~-~~l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~ 537 (1002)
+++++.++++++. ..|+.++++++++|+++|.+|. |+++|++|++++||+++|++|+++..+.+++........+.
T Consensus 2 ~~~~~~e~~l~~~~~~~~~l~~~~~d~i~~~d~~g~---i~~~N~a~~~l~Gy~~~eliG~~~~~l~~~~~~~~~~~~~~ 78 (130)
T 1d06_A 2 SHMLETEDVVRARDAHLRSILDTVPDATVVSATDGT---IVSFNAAAVRQFGYAEEEVIGQNLRILMPEPYRHEHDGYLQ 78 (130)
T ss_dssp CHHHHHHHHHHHHTSCHHHHHTTCSSEEEEEETTSB---EEEECHHHHHHHCCCHHHHTTSBGGGGSCTTHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhhCcCeEEEECCCCe---EEEEcHHHHHHHCCCHHHHcCCcHHHHCCchhHHHHHHHHH
Confidence 5678888888766 6699999999999999999777 99999999999999999999999888877665444334444
Q ss_pred HHHhcCCc----EEEEEEEEecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCC
Q 001869 538 AAIDNQTD----VTVQLINYTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (1002)
Q Consensus 538 ~~l~~~~~----~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DIT 587 (1002)
.....+.. ...++..+++||+.+|+++++.|+.++ +..+++++++|||
T Consensus 79 ~~~~~~~~~~~~~~~e~~~~~kdG~~~~~~~~~~~~~~~--~~~~~~~~~~DIT 130 (130)
T 1d06_A 79 RYMATGEKRIIGIDRVVSGQRKDGSTFPMKLAVGEMRSG--GERFFTGFIRDLT 130 (130)
T ss_dssp HHHHHCCCSSTTSCEEEEEECTTSCEEEEEEEEEEEEET--TEEEEEEEEEECC
T ss_pred HHHhcCCccccCCeeEEEEEeCCCCEEEEEEEEEEEEEC--CeEEEEEEEEECc
Confidence 44443332 245777899999999999999999764 3456899999998
No 287
>3mqq_A Transcriptional regulator, LUXR family; PAS domain, PSI, MCSG, structural genomics, center for structural genomics; 1.65A {Burkholderia thailandensis} PDB: 3mqo_A
Probab=99.59 E-value=2.2e-15 Score=141.34 Aligned_cols=115 Identities=15% Similarity=0.153 Sum_probs=93.7
Q ss_pred HHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCC-hHHHHHHHHHHHcCCcEEEEEE
Q 001869 190 IVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTD-PEDVAKIRETLQNGQSYCGRLL 268 (1002)
Q Consensus 190 ~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~-~~~~~~i~~~l~~g~~~~~e~~ 268 (1002)
.|+.++++++++|++ |. +|+|+++|++|++++||+.+|++|+++..++++... ......+...+..+..+..+++
T Consensus 4 ~~~~~~~~~~~~i~~-~~---~g~i~~~N~a~~~l~G~~~~el~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 79 (120)
T 3mqq_A 4 DYKTAFHLAPIGLVL-SR---DRVIEDCNDELAAIFRCARADLIGRSFEVLYPSSDEFERIGERISPVMIAHGSYADDRI 79 (120)
T ss_dssp CHHHHHHHCSSEEEE-EE---TTEEEEECHHHHHHTTSCHHHHTTCBGGGGSSSHHHHHHHHHHHHHHHHHHSCEEEEEE
T ss_pred hHHHHHhcCCceEEE-ec---CCEEHHHHHHHHHHhCcCHHHhCCCchhhccCChhhHHHHHHHHHHHHhcCCcceEEEE
Confidence 378899999999964 66 888999999999999999999999998877665332 3344556666777788899999
Q ss_pred EEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHH
Q 001869 269 NYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEG 309 (1002)
Q Consensus 269 ~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~ 309 (1002)
.+++||+.+|+.++..|+ +.+|...+++++++|||++|++
T Consensus 80 ~~~~dG~~~~~~~~~~~~-~~~~~~~~~v~~~~DITerk~~ 119 (120)
T 3mqq_A 80 MKRAGGELFWCHVTGRAL-DRTAPLAAGVWTFEDLSATRRV 119 (120)
T ss_dssp EECTTSCEEEEEEEEEES-STTSTTSSEEEEEEESCC----
T ss_pred EEeCCCCEEEEEEEEEEC-CCCCCceeEEEEEEcccHhhcc
Confidence 999999999999999999 5666677889999999999975
No 288
>3mqq_A Transcriptional regulator, LUXR family; PAS domain, PSI, MCSG, structural genomics, center for structural genomics; 1.65A {Burkholderia thailandensis} PDB: 3mqo_A
Probab=99.59 E-value=2.3e-15 Score=141.32 Aligned_cols=116 Identities=16% Similarity=0.169 Sum_probs=94.0
Q ss_pred ccHHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCC-HHHHHHHHHHHhcCCcEEEEE
Q 001869 472 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETD-PATVRKIRAAIDNQTDVTVQL 550 (1002)
Q Consensus 472 ~~l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~-~~~~~~l~~~l~~~~~~~~e~ 550 (1002)
..|+.+|++++++|++ |.+|. |+++|++|++++||+++|++|++...+.+++.. ......+...+..+..+..|+
T Consensus 3 ~~~~~~~~~~~~~i~~-~~~g~---i~~~N~a~~~l~G~~~~el~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 78 (120)
T 3mqq_A 3 IDYKTAFHLAPIGLVL-SRDRV---IEDCNDELAAIFRCARADLIGRSFEVLYPSSDEFERIGERISPVMIAHGSYADDR 78 (120)
T ss_dssp CCHHHHHHHCSSEEEE-EETTE---EEEECHHHHHHTTSCHHHHTTCBGGGGSSSHHHHHHHHHHHHHHHHHHSCEEEEE
T ss_pred chHHHHHhcCCceEEE-ecCCE---EHHHHHHHHHHhCcCHHHhCCCchhhccCChhhHHHHHHHHHHHHhcCCcceEEE
Confidence 3589999999999965 66555 999999999999999999999998777655332 334555666777788899999
Q ss_pred EEEecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCccccc
Q 001869 551 INYTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEP 592 (1002)
Q Consensus 551 ~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~ 592 (1002)
+++++||+.+|+.++..|+ +.+|...+++++++|||++|+.
T Consensus 79 ~~~~~dG~~~~~~~~~~~~-~~~~~~~~~v~~~~DITerk~~ 119 (120)
T 3mqq_A 79 IMKRAGGELFWCHVTGRAL-DRTAPLAAGVWTFEDLSATRRV 119 (120)
T ss_dssp EEECTTSCEEEEEEEEEES-STTSTTSSEEEEEEESCC----
T ss_pred EEEeCCCCEEEEEEEEEEC-CCCCCceeEEEEEEcccHhhcc
Confidence 9999999999999999999 5566667889999999999973
No 289
>2z6d_A Phototropin-2; PAS-fold, LOV-fold, alternative splicing, ATP-binding, chromophore, flavoprotein, FMN, kinase, membrane, nucleotide-binding; HET: FMN; 2.00A {Arabidopsis thaliana} PDB: 2z6c_A*
Probab=99.59 E-value=2.5e-14 Score=132.96 Aligned_cols=127 Identities=75% Similarity=1.225 Sum_probs=107.5
Q ss_pred chHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEE
Q 001869 186 RVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG 265 (1002)
Q Consensus 186 ~~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~ 265 (1002)
+.++.++.++++++++++++|..+.+|+|+++|+++++++||+.++++|+++..+.++.........+...+..+..+..
T Consensus 3 ~~~~~~~~~~~~~~~~i~~~d~~d~~~~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (130)
T 2z6d_A 3 RVSQELKTALSTLQQTFVVSDATQPHCPIVYASSGFFTMTGYSSKEIVGRNCRFLQGPDTDKNEVAKIRDCVKNGKSYCG 82 (130)
T ss_dssp ----CHHHHHHHTTCEEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEE
T ss_pred hHHHHHHHHHHhcccceeeeeccCCCCcEEEecHHHHHHhCcCHHHHcCCChhhccCCCCCchHHHHHHHHHHcCCccee
Confidence 34566889999999999999932227889999999999999999999999998888887777777888888888888888
Q ss_pred EEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHH
Q 001869 266 RLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKD 312 (1002)
Q Consensus 266 e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~ 312 (1002)
++...+++|..+|+.+++.|+.+.+|.+.+++++++|||+++++|++
T Consensus 83 ~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~~e~e 129 (130)
T 2z6d_A 83 RLLNYKKDGTPFWNLLTVTPIKDDQGNTIKFIGMQVEVSKYTEGVND 129 (130)
T ss_dssp EEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCTTC-----
T ss_pred EEEEEcCCCcEEEEEEEEEEEECCCCCeeEEEEEEecchHHHHhhcc
Confidence 99999999999999999999999999999999999999999988765
No 290
>3nja_A Probable ggdef family protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.37A {Chromobacterium violaceum}
Probab=99.58 E-value=4.8e-15 Score=138.38 Aligned_cols=122 Identities=11% Similarity=0.014 Sum_probs=94.7
Q ss_pred ccchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcC--CCCCcCCCCCCChHHHHHHHHHHHcCC
Q 001869 184 LPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVG--RNCRFLQGAGTDPEDVAKIRETLQNGQ 261 (1002)
Q Consensus 184 L~~~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG--~~~~~l~~~~~~~~~~~~i~~~l~~g~ 261 (1002)
|+++++.|+.++++++++++++|. +|.++++|+++++++||+.++++| ..+..+.++++.......+...+..+.
T Consensus 2 l~~~~~~l~~~~~~~~~~i~~~d~---~~~~~~~n~~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 78 (125)
T 3nja_A 2 NAMAEKLLHTAESDAGIGSWVLHM---ESGRLEWSQAVHDIFGTDSATFDATEDAYFQRVHPDDRARVRRELDRHVLGDR 78 (125)
T ss_dssp ---------------CCEEEEEET---TTTEEEECHHHHHHHTCCTTTCCCBHHHHHHHBCTTTHHHHHHHHHHHHHSCC
T ss_pred cHHHHHHHHHHHHhCCeeEEEEEc---CCCcEEECHHHHHHhCCCcccccccHHHHHhhcChhHHHHHHHHHHHHHhcCC
Confidence 567778899999999999999999 777999999999999999999999 444456777777777788888889998
Q ss_pred cEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhH
Q 001869 262 SYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTE 308 (1002)
Q Consensus 262 ~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~ 308 (1002)
.+..+++..+++|..+|+.++..|+.+.+|.+.+++++++|||++|+
T Consensus 79 ~~~~e~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~g~~~DITe~k~ 125 (125)
T 3nja_A 79 PFDVEYRIVRPDGQVRELLERNHIQRQASGQVDHLWGTVIDMTEHKQ 125 (125)
T ss_dssp CEEEEEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCC---
T ss_pred CceEEEEEECCCCCEEEEEEeeEEEECCCCCEEEEEEEEEecccccC
Confidence 89999999999999999999999999999999999999999999985
No 291
>2vv6_A FIXL, sensor protein FIXL; signaling protein, transferase, phosphoprotein, nitrogen FIX PER-ARNT-SIM, metal-binding, PAS, iron, heme; HET: HEM; 1.5A {Bradyrhizobium japonicum} PDB: 1xj6_A* 1xj4_A* 2vv7_A* 2vv8_A* 1lsw_A* 1dp8_A* 1dp9_A* 1drm_A* 1lsv_A* 1dp6_A* 1lsx_A* 1lt0_A* 1y28_A* 2cmn_A* 1xj3_A* 1xj2_A* 2owh_A* 2owj_A*
Probab=99.58 E-value=7.2e-15 Score=137.75 Aligned_cols=113 Identities=18% Similarity=0.232 Sum_probs=81.0
Q ss_pred hcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCc----EEEEEEEEec
Q 001869 197 TFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS----YCGRLLNYKK 272 (1002)
Q Consensus 197 ~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~----~~~e~~~~~k 272 (1002)
+++++|+++|. +|+|+++|++|++++||+.+|++|+++..+.++.........+......+.. ...++..+++
T Consensus 1 ~~~d~i~~~d~---~g~i~~~N~a~~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (119)
T 2vv6_A 1 TIPDAMIVIDG---HGIIQLFSTAAERLFGWSELEAIGQNVNILMPEPDRSRHDSYISRYRTTSDPHIIGIGRIVTGKRR 77 (119)
T ss_dssp -CCCEEEEEET---TSBEEEECHHHHHHHCCCHHHHTTSBGGGGSCTTHHHHHHHHHHHHHHHCCCSSTTTCEEEEEECT
T ss_pred CCcceEEEECC---CCeEEEEhHHHHHHhCCCHHHHcCCCHHHhCCchHHHHHHHHHHHHhcCCCcccCCCceEEEEEeC
Confidence 36789999998 8889999999999999999999999988777665444333444444444332 2346777899
Q ss_pred CCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhh
Q 001869 273 DGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (1002)
Q Consensus 273 dG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~l~ 314 (1002)
||+.+|++++++|+.+. ...+++++++|||++|++|++|+
T Consensus 78 dG~~~~~~~~~~~~~~~--~~~~~~~~~~DITerk~~e~~l~ 117 (119)
T 2vv6_A 78 DGTTFPMHLSIGEMQSG--GEPYFTGFVRDLTEHQQTQARLQ 117 (119)
T ss_dssp TSCEEEEEEEEEEEEET--TEEEEEEEEEECC----------
T ss_pred CCCEEEEEEEEEEEEEC--CeEEEEEEEEEcHHHHHHHHHHH
Confidence 99999999999999764 44568999999999999999875
No 292
>3nja_A Probable ggdef family protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.37A {Chromobacterium violaceum}
Probab=99.58 E-value=7.3e-15 Score=137.12 Aligned_cols=116 Identities=13% Similarity=0.025 Sum_probs=96.3
Q ss_pred cHHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcC--CCCccccCCCCCHHHHHHHHHHHhcCCcEEEEE
Q 001869 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILG--RNCRFLQGPETDPATVRKIRAAIDNQTDVTVQL 550 (1002)
Q Consensus 473 ~l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliG--k~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~ 550 (1002)
.|+.+++++++++|++|.+|. ++++|+++++++||+.++++| ..+..+++|++.......+...+..+..+..++
T Consensus 8 ~l~~~~~~~~~~i~~~d~~~~---~~~~n~~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~e~ 84 (125)
T 3nja_A 8 LLHTAESDAGIGSWVLHMESG---RLEWSQAVHDIFGTDSATFDATEDAYFQRVHPDDRARVRRELDRHVLGDRPFDVEY 84 (125)
T ss_dssp ---------CCEEEEEETTTT---EEEECHHHHHHHTCCTTTCCCBHHHHHHHBCTTTHHHHHHHHHHHHHSCCCEEEEE
T ss_pred HHHHHHHhCCeeEEEEEcCCC---cEEECHHHHHHhCCCcccccccHHHHHhhcChhHHHHHHHHHHHHHhcCCCceEEE
Confidence 488999999999999999777 999999999999999999999 445667888888888888888888888899999
Q ss_pred EEEecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCcccc
Q 001869 551 INYTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 591 (1002)
Q Consensus 551 ~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~ 591 (1002)
++.+++|..+|+.+++.|+++.+|.+.+++|+++|||++|+
T Consensus 85 ~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~g~~~DITe~k~ 125 (125)
T 3nja_A 85 RIVRPDGQVRELLERNHIQRQASGQVDHLWGTVIDMTEHKQ 125 (125)
T ss_dssp EEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCC---
T ss_pred EEECCCCCEEEEEEeeEEEECCCCCEEEEEEEEEecccccC
Confidence 99999999999999999999999999999999999999985
No 293
>3lyx_A Sensory BOX/ggdef domain protein; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Colwellia psychrerythraea}
Probab=99.57 E-value=2.9e-14 Score=131.48 Aligned_cols=120 Identities=18% Similarity=0.298 Sum_probs=108.0
Q ss_pred chHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEE
Q 001869 186 RVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG 265 (1002)
Q Consensus 186 ~~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~ 265 (1002)
++.+.++.++++++++++++|. +|+|+++|+++++++|++.++++|+++..+.++.........+...+..+..+..
T Consensus 4 ~~~~~~~~~~~~~~~~i~~~d~---~~~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (124)
T 3lyx_A 4 DILKQRAKAFDYVFDAIVVTDL---QGFIIDWNKGSETLYGYSKEQAIGQPVNMLHVPGDTEHITSEVISAVENQGKWTG 80 (124)
T ss_dssp CHHHHHHHGGGTCSSEEEEEET---TCBEEEECHHHHHHHCCCHHHHTTSBGGGGSCTTTHHHHHHHHHHHHHHTSCEEE
T ss_pred hHHHHHHHHHhhcCceEEEECC---CCcEeehhhHHHHHhCCCHHHHcCCCHHHhcCcchhhHHHHHHHHHHHcCCcccc
Confidence 4567899999999999999998 7889999999999999999999999988777776666667778888889998999
Q ss_pred EEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhH
Q 001869 266 RLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTE 308 (1002)
Q Consensus 266 e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~ 308 (1002)
+.....++|..+|+.+++.|+.+.+|.+.+++++++|||++|+
T Consensus 81 ~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~ 123 (124)
T 3lyx_A 81 EIRMLHKDGHIGWIESMCVPIYGENYQMVGALGINRDITKRKK 123 (124)
T ss_dssp EEEEECTTSCEEEEEEEEEEEECSTTCEEEEEEEEEECSCC--
T ss_pred eEEEEccCCCEEEEEEEEEEEECCCCCEEEEEEEEecchhhhc
Confidence 9999999999999999999999999999999999999999886
No 294
>3k3c_A Protein RV1364C/MT1410; sensor, PAS, signal transduction, fatty-acid binding, sigma regulator, signaling protein; HET: PLM; 1.62A {Mycobacterium tuberculosis} PDB: 3k3d_A
Probab=99.57 E-value=3.8e-15 Score=146.82 Aligned_cols=126 Identities=10% Similarity=0.095 Sum_probs=106.3
Q ss_pred cchHHHHHHHHHhcCCcEEEEe-CCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcE
Q 001869 185 PRVSDIVKDALSTFQQTFVVSD-ATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSY 263 (1002)
Q Consensus 185 ~~~~~~l~~ile~~~d~i~v~D-~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~ 263 (1002)
..+.+.|+.++++++++|+++| . +|+|+++|++|++++||+ +++|+++..++++.........+..++..+.+.
T Consensus 13 ~~~~~~~~~~~~~~~~~i~~~d~~---~~~i~~~N~~~~~~~g~~--~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 87 (158)
T 3k3c_A 13 VGAAEDVRRIFEHIPAILVGLEGP---DHRFVAVNAAYRGFSPLL--DTVGQPAREVYPELEGQQIYEMLDRVYQTGEPQ 87 (158)
T ss_dssp TCCHHHHHHHHHHCSSEEEEEETT---TTEEEEECHHHHHHCTTC--CSTTSBHHHHSGGGGGTTHHHHHHHHHHHCCCE
T ss_pred HHHHHHHHHHHhcCCceEEEEECC---CcEeHHHHHHHHHHcCCc--hhcCCcHHHhCCchhHHHHHHHHHHHHHhCCcc
Confidence 3455789999999999999999 7 888999999999999999 899999887777766556677788888888875
Q ss_pred EEEEE-E--Ee-cC-CcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhc
Q 001869 264 CGRLL-N--YK-KD-GTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (1002)
Q Consensus 264 ~~e~~-~--~~-kd-G~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~l~~ 315 (1002)
..+.. . .+ .+ |..+|+.+++.|+++.+|.+.|++++++|||++|++|++|+.
T Consensus 88 ~~~~~~~~~~~~~~~g~~~~~~~~~~pi~~~~g~~~g~~~~~~DITe~k~~e~~l~~ 144 (158)
T 3k3c_A 88 SGSEWRLQTDYDGSGVEERYFDFVVTPRRRADGSIEGVQLIVDDVTSRVRARQAAEA 144 (158)
T ss_dssp EEEEEEEEEESSSSCEEEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHHHHHHHHH
T ss_pred cccceeEEeccCCCCcceEEEEEEEEEeECCCCCEEEEEEEEEehhHHHHHHHHHHH
Confidence 54422 2 22 22 778899999999999999999999999999999999999863
No 295
>2r78_A Sensor protein; sensory box sensor histidine kinase/response regulator, structural genomics, PSI, MCSG; 1.60A {Geobacter sulfurreducens pca}
Probab=99.56 E-value=3.8e-14 Score=132.84 Aligned_cols=105 Identities=15% Similarity=0.171 Sum_probs=86.0
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001869 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (1002)
Q Consensus 474 l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~ 553 (1002)
|+.+|++++++|+++|.+|+ |+++|++|++++||+++|++|+++..+.++.... ........+..+..+..|.+++
T Consensus 13 ~~~l~e~~~d~i~~~d~~g~---i~~vN~a~~~l~Gy~~~el~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~e~~~~ 88 (117)
T 2r78_A 13 YRALFEHAIDGIFIMDAEGH---YLDVNPAICSAIGYTRDEFLALDWGVLSRGVDSG-WAAASLARIVGGEPLREERTVW 88 (117)
T ss_dssp HHHHHHHCSSEEEEECTTSB---EEEECHHHHHHHCCCHHHHTTCBTTTTTTCSTTS-HHHHHHHHHHTTCCEEEEEEEE
T ss_pred HHHHHhcCCceEEEECCCCC---EEEecHHHHHHHCcCHHHHcCCCHHHhCCccchh-HHHHHHHHHHcCCcEEEEEEEE
Confidence 89999999999999999776 9999999999999999999999876665443322 2333455566777788999999
Q ss_pred ecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCC
Q 001869 554 TKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (1002)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DIT 587 (1002)
+|||+.+|++++..|+. +|+ ++++++|||
T Consensus 89 ~kdG~~~~v~~~~~~~~--~g~---~~~i~~DIT 117 (117)
T 2r78_A 89 TRNGDQLTVELSAHLLP--DGK---ILGIARDVS 117 (117)
T ss_dssp CTTSCEEEEEEEEEECT--TSC---EEEEEEC--
T ss_pred ecCCCEEEEEEEEEEec--CCe---EEEEEEeCC
Confidence 99999999999999986 565 678999998
No 296
>2v0u_A NPH1-1, LOV2; kinase, transferase, ATP-binding, serine/threonine-protein kinase, light-induced signal trans phototropin1, nucleotide-binding; HET: FMN; 1.40A {Avena sativa} PDB: 2v0w_A* 2v1b_A* 2v1a_A* 1jnu_A* 1g28_A*
Probab=99.55 E-value=6.4e-14 Score=133.46 Aligned_cols=139 Identities=83% Similarity=1.224 Sum_probs=119.5
Q ss_pred HHHHHHhccccEEEEcC---CCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEE
Q 001869 474 LATTLERIEKNFVITDP---RLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQL 550 (1002)
Q Consensus 474 l~~i~e~~~~~I~i~D~---~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~ 550 (1002)
|+.++++++++++++|. +|. |+++|+++++++||+.++++|+++..+.+++........+...+..+..+..++
T Consensus 4 l~~~~~~~~~~i~~~d~~~~~~~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (146)
T 2v0u_A 4 LATTLERIEKNFVITDPRLPDNP---IIFASDSFLQLTEYSREEILGRNCRFLQGPETDRATVRKIRDAIDNQTEVTVQL 80 (146)
T ss_dssp CCCTGGGSSSCEEEECTTSTTCC---EEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHhcCCCcEEEEcCCCCCce---EEEEcHHHHHHHCcCHHHHcCCCHHHhcCCcCChHHHHHHHHHHhcCCCcceEE
Confidence 56678999999999999 887 999999999999999999999998888888888887888888888999999999
Q ss_pred EEEecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCccccccccCCchhhhHHHHHHHHHHhhhhhhhhcc
Q 001869 551 INYTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNEAVKE 622 (1002)
Q Consensus 551 ~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e~~~~~~~~~~e~~~~~~~~~~~v~~~~~~ 622 (1002)
...+++|..+|+.++..|+++.+|.+.+++++++|||++|+.+ ...+.++.++.+...+.+.+++
T Consensus 81 ~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 145 (146)
T 2v0u_A 81 INYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVRDA-------AEREGVMLIKKTAENIDEAAKE 145 (146)
T ss_dssp EEECTTCCEEEEEEEEEEEECTTSCEEEEEEEEEEESSCCCHH-------HHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEecCCcEEEEEEEEEEeECCCCCEEEEEEEEeechHHHHHH-------HHHHHHHHHHHHHhccHhhHhc
Confidence 9999999999999999999999999999999999999999732 2334455556666666665543
No 297
>2z6d_A Phototropin-2; PAS-fold, LOV-fold, alternative splicing, ATP-binding, chromophore, flavoprotein, FMN, kinase, membrane, nucleotide-binding; HET: FMN; 2.00A {Arabidopsis thaliana} PDB: 2z6c_A*
Probab=99.55 E-value=1.3e-13 Score=128.12 Aligned_cols=119 Identities=44% Similarity=0.850 Sum_probs=106.8
Q ss_pred cHHHHHHhccccEEEEc---CCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEE
Q 001869 473 DLATTLERIEKNFVITD---PRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQ 549 (1002)
Q Consensus 473 ~l~~i~e~~~~~I~i~D---~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e 549 (1002)
.++.++++++++++++| .+|. |+++|+++++++||+.++++|+++..+.++.........+...+..+..+..+
T Consensus 7 ~~~~~~~~~~~~i~~~d~~d~~~~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (130)
T 2z6d_A 7 ELKTALSTLQQTFVVSDATQPHCP---IVYASSGFFTMTGYSSKEIVGRNCRFLQGPDTDKNEVAKIRDCVKNGKSYCGR 83 (130)
T ss_dssp CHHHHHHHTTCEEEEEETTSTTCC---EEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHhcccceeeeeccCCCCc---EEEecHHHHHHhCcCHHHHcCCChhhccCCCCCchHHHHHHHHHHcCCcceeE
Confidence 38999999999999999 7666 99999999999999999999999888888887777778888888888888999
Q ss_pred EEEEecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCccccccc
Q 001869 550 LINYTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLR 594 (1002)
Q Consensus 550 ~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e~ 594 (1002)
+...+++|..+|+.++..|+.+.+|.+.+++++++|||++|+.++
T Consensus 84 ~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~~e~ 128 (130)
T 2z6d_A 84 LLNYKKDGTPFWNLLTVTPIKDDQGNTIKFIGMQVEVSKYTEGVN 128 (130)
T ss_dssp EEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCTTC----
T ss_pred EEEEcCCCcEEEEEEEEEEEECCCCCeeEEEEEEecchHHHHhhc
Confidence 999999999999999999999999999999999999999998654
No 298
>3mxq_A Sensor protein; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.78A {Vibrio cholerae o1 biovar el tor}
Probab=99.54 E-value=5.8e-15 Score=145.65 Aligned_cols=124 Identities=14% Similarity=0.177 Sum_probs=99.5
Q ss_pred cccchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCc
Q 001869 183 GLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS 262 (1002)
Q Consensus 183 ~L~~~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~ 262 (1002)
+++++..+++++++++++||+++|. +|+|++||+++++++|++.+|++|+++..+++. ........++.++..|.+
T Consensus 16 ~~~~~~~~l~~il~~~~~gi~v~D~---~g~I~~~N~a~~~~~G~~~~eviG~~~~~~~p~-~~~~~~~~l~~vl~~G~~ 91 (152)
T 3mxq_A 16 AMAKSRLLLSELLDQLSFALCIVRN---DYVIVKVNEYFESRVIFDGETMQGKNILELFPE-SADYLKRKIDTALVIESS 91 (152)
T ss_dssp HHHHHHHHHHHHHHHHCCEEEEEET---TSBEEEECHHHHHTSSSCHHHHTTSBHHHHSGG-GHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEcC---CCEEEEECHHHHHHHCcCHHHHCCCCHHHhcCC-hHHHHHHHHHHHHhcCCc
Confidence 4677778899999999999999999 888999999999999999999999999988877 555566778889988876
Q ss_pred EEEE---------EE---EEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHH
Q 001869 263 YCGR---------LL---NYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGA 310 (1002)
Q Consensus 263 ~~~e---------~~---~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e 310 (1002)
.... ++ ...++|..+|..++++|+.|++|.+.|++.+++|||+++.+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ti~Pl~d~~G~v~gv~~ii~DVTe~~~a~ 151 (152)
T 3mxq_A 92 SFSSWEQKPHLLPFKSSRPVSGEEEQMYQNLEVIPIHSEDGTIEHVCLCVYDVTIQASQQ 151 (152)
T ss_dssp EEEECCSSSCSSCC----------CCEEEEEEEEEEECTTSCEEEEEEEEEEEECC----
T ss_pred eeeecccccccccccccCCCCCCCcEEEEEEEEEEEECCCCCEEEEEEEEEECCHHHhcc
Confidence 3321 11 124677888999999999999999999999999999998753
No 299
>2vv6_A FIXL, sensor protein FIXL; signaling protein, transferase, phosphoprotein, nitrogen FIX PER-ARNT-SIM, metal-binding, PAS, iron, heme; HET: HEM; 1.5A {Bradyrhizobium japonicum} PDB: 1xj6_A* 1xj4_A* 2vv7_A* 2vv8_A* 1lsw_A* 1dp8_A* 1dp9_A* 1drm_A* 1lsv_A* 1dp6_A* 1lsx_A* 1lt0_A* 1y28_A* 2cmn_A* 1xj3_A* 1xj2_A* 2owh_A* 2owj_A*
Probab=99.54 E-value=2.1e-14 Score=134.61 Aligned_cols=111 Identities=18% Similarity=0.184 Sum_probs=80.6
Q ss_pred ccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCc----EEEEEEEEecC
Q 001869 481 IEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD----VTVQLINYTKS 556 (1002)
Q Consensus 481 ~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~----~~~e~~~~~kd 556 (1002)
++++|+++|.+|. |+++|++|+++|||+++|++|++...+.+++........+......+.. ...++..+++|
T Consensus 2 ~~d~i~~~d~~g~---i~~~N~a~~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 78 (119)
T 2vv6_A 2 IPDAMIVIDGHGI---IQLFSTAAERLFGWSELEAIGQNVNILMPEPDRSRHDSYISRYRTTSDPHIIGIGRIVTGKRRD 78 (119)
T ss_dssp CCCEEEEEETTSB---EEEECHHHHHHHCCCHHHHTTSBGGGGSCTTHHHHHHHHHHHHHHHCCCSSTTTCEEEEEECTT
T ss_pred CcceEEEECCCCe---EEEEhHHHHHHhCCCHHHHcCCCHHHhCCchHHHHHHHHHHHHhcCCCcccCCCceEEEEEeCC
Confidence 6899999999777 9999999999999999999999988777665544333334444433332 34567789999
Q ss_pred CCEEEEEEEEEeeeCCCCCEEEEEEEEecCCccccccccC
Q 001869 557 GNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNS 596 (1002)
Q Consensus 557 G~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e~~~ 596 (1002)
|+.+|+++++.|+.+. ...+++++++|||++|+.|+++
T Consensus 79 G~~~~~~~~~~~~~~~--~~~~~~~~~~DITerk~~e~~l 116 (119)
T 2vv6_A 79 GTTFPMHLSIGEMQSG--GEPYFTGFVRDLTEHQQTQARL 116 (119)
T ss_dssp SCEEEEEEEEEEEEET--TEEEEEEEEEECC---------
T ss_pred CCEEEEEEEEEEEEEC--CeEEEEEEEEEcHHHHHHHHHH
Confidence 9999999999999864 3356899999999999976543
No 300
>3h9w_A Diguanylate cyclase with PAS/PAC sensor; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.90A {Marinobacter aquaeolei}
Probab=99.53 E-value=1.2e-14 Score=135.17 Aligned_cols=111 Identities=14% Similarity=0.094 Sum_probs=97.7
Q ss_pred ccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCC-CccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCCE
Q 001869 481 IEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRN-CRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGNK 559 (1002)
Q Consensus 481 ~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~-~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG~~ 559 (1002)
+++++|.+|.. +++++|+|+++++++||++++++|.. +..++||++.......+..++..+..+..|++++++||+.
T Consensus 2 a~~giw~~d~~--~~~~~~~n~~~~~l~G~~~~e~~~~~~~~~~ihpdd~~~~~~~~~~~~~~~~~~~~e~r~~~~dG~~ 79 (115)
T 3h9w_A 2 TKAIPWKINWQ--TMAFEYIGPQIEALLGWPQGSWKSVEDWATRMHPEDQEWVVNFCVKQSECGVDHEADYRALHRDGHY 79 (115)
T ss_dssp -CCEEEEEETT--TTEEEEECTHHHHHHCSCGGGCCBHHHHHHSBCHHHHHHHHHHHHHHHHTTCCEEEEEEEECTTSCE
T ss_pred cceEEEEEEcC--CCcEEEEChhHHHHhCCChHHccCHHHHHHhcCHHHHHHHHHHHHHHHhcCCcccEEEEEEcCCCCE
Confidence 57899999953 44499999999999999999999932 3467899988888888889998888999999999999999
Q ss_pred EEEEEEEEeeeCCCCCEEEEEEEEecCCcccccc
Q 001869 560 FWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (1002)
Q Consensus 560 ~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e 593 (1002)
+|+..++.|++|++|++++++|++.|||++|++|
T Consensus 80 ~w~~~~~~~~~d~~G~~~~~~G~~~Dit~~k~~~ 113 (115)
T 3h9w_A 80 VWIRDVVHVVRDDSGEVEALIGFMFDISLEHHHH 113 (115)
T ss_dssp EEEEEEEEEEECTTSCEEEEEEEEEECGGGGC--
T ss_pred EEEEEEEEEEECCCCCEEEEEEEEeccCcccccc
Confidence 9999999999999999999999999999999865
No 301
>2wkq_A NPH1-1, RAS-related C3 botulinum toxin substrate 1; transferase, cell adhesion, nucleotide-binding, protein engineering, RAS superfamily LOV2; HET: GTP FMN; 1.60A {Avena sativa} PDB: 2wkr_A* 2wkp_A*
Probab=99.53 E-value=4.5e-14 Score=158.11 Aligned_cols=117 Identities=87% Similarity=1.284 Sum_probs=108.8
Q ss_pred HHHHHhccccEEEEcC---CCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEE
Q 001869 475 ATTLERIEKNFVITDP---RLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLI 551 (1002)
Q Consensus 475 ~~i~e~~~~~I~i~D~---~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~ 551 (1002)
..++++++++|+++|. +|+ |+++|++|++++||+++|++|+++..+.+++......+.+...+..+..+..+++
T Consensus 14 ~~~~~~~~~~i~~~D~~~~~g~---i~~~N~a~~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 90 (332)
T 2wkq_A 14 ATTLERIEKNFVITDPRLPDNP---IIFASDSFLQLTEYSREEILGRNARFLQGPETDRATVRKIRDAIDNQTEVTVQLI 90 (332)
T ss_dssp CCCGGGCCSEEEEECTTSTTCC---EEEECHHHHHHHCCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HhHhhcCCCcEEEecCCCCCCC---EEEeehHHHHHhCCCHHHHcCCCchhhcCCCCCHHHHHHHHHHHHcCCeeEEEEE
Confidence 4467889999999999 777 9999999999999999999999998898888888888889999999999999999
Q ss_pred EEecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCccccccc
Q 001869 552 NYTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLR 594 (1002)
Q Consensus 552 ~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e~ 594 (1002)
.+++||+.+|+.+++.|++|.+|++.+++++++|||++|+.++
T Consensus 91 ~~~~dG~~~~~~~~~~pi~d~~g~~~~~v~~~~DITe~k~~e~ 133 (332)
T 2wkq_A 91 NYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVRDAA 133 (332)
T ss_dssp EECTTCCEEEEEEEEEEEECTTSCEEEEEEEEEEESSCCCHHH
T ss_pred EEcCCCCEEEEeeEEEEeEcCCCCEEEEEEEeccCchhhhhhh
Confidence 9999999999999999999999999999999999999998654
No 302
>2wkq_A NPH1-1, RAS-related C3 botulinum toxin substrate 1; transferase, cell adhesion, nucleotide-binding, protein engineering, RAS superfamily LOV2; HET: GTP FMN; 1.60A {Avena sativa} PDB: 2wkr_A* 2wkp_A*
Probab=99.53 E-value=5.6e-14 Score=157.31 Aligned_cols=121 Identities=40% Similarity=0.796 Sum_probs=111.6
Q ss_pred HHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEecC
Q 001869 194 ALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKD 273 (1002)
Q Consensus 194 ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kd 273 (1002)
++++++++|+++|...++|+|+|+|++|++++||+++|++|+++..+.+++........+...+..+..+..+++.+++|
T Consensus 16 ~~~~~~~~i~~~D~~~~~g~i~~~N~a~~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~d 95 (332)
T 2wkq_A 16 TLERIEKNFVITDPRLPDNPIIFASDSFLQLTEYSREEILGRNARFLQGPETDRATVRKIRDAIDNQTEVTVQLINYTKS 95 (332)
T ss_dssp CGGGCCSEEEEECTTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHTTCCEEEEEEEECTT
T ss_pred HhhcCCCcEEEecCCCCCCCEEEeehHHHHHhCCCHHHHcCCCchhhcCCCCCHHHHHHHHHHHHcCCeeEEEEEEEcCC
Confidence 46899999999998555677999999999999999999999999988888888888888999999999999999999999
Q ss_pred CcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhh
Q 001869 274 GTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (1002)
Q Consensus 274 G~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~l~ 314 (1002)
|+.+|+++++.|++|.+|.+.+++++++|||++++++++++
T Consensus 96 G~~~~~~~~~~pi~d~~g~~~~~v~~~~DITe~k~~e~~~~ 136 (332)
T 2wkq_A 96 GKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVRDAAERE 136 (332)
T ss_dssp CCEEEEEEEEEEEECTTSCEEEEEEEEEEESSCCCHHHHHH
T ss_pred CCEEEEeeEEEEeEcCCCCEEEEEEEeccCchhhhhhhhcc
Confidence 99999999999999999999999999999999999888765
No 303
>3lyx_A Sensory BOX/ggdef domain protein; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Colwellia psychrerythraea}
Probab=99.53 E-value=1e-13 Score=127.86 Aligned_cols=115 Identities=20% Similarity=0.225 Sum_probs=103.9
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001869 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (1002)
Q Consensus 474 l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~ 553 (1002)
++.++++++++++++|.+|. |+++|+++++++|++.++++|++...+.+++........+...+..+..+..+....
T Consensus 9 ~~~~~~~~~~~i~~~d~~~~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (124)
T 3lyx_A 9 RAKAFDYVFDAIVVTDLQGF---IIDWNKGSETLYGYSKEQAIGQPVNMLHVPGDTEHITSEVISAVENQGKWTGEIRML 85 (124)
T ss_dssp HHHGGGTCSSEEEEEETTCB---EEEECHHHHHHHCCCHHHHTTSBGGGGSCTTTHHHHHHHHHHHHHHTSCEEEEEEEE
T ss_pred HHHHHhhcCceEEEECCCCc---EeehhhHHHHHhCCCHHHHcCCCHHHhcCcchhhHHHHHHHHHHHcCCcccceEEEE
Confidence 78999999999999999766 999999999999999999999998866666666666777888888899999999999
Q ss_pred ecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCcccc
Q 001869 554 TKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 591 (1002)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~ 591 (1002)
+++|..+|+.++..|+.+.+|.+.+++++++|||++|+
T Consensus 86 ~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~ 123 (124)
T 3lyx_A 86 HKDGHIGWIESMCVPIYGENYQMVGALGINRDITKRKK 123 (124)
T ss_dssp CTTSCEEEEEEEEEEEECSTTCEEEEEEEEEECSCC--
T ss_pred ccCCCEEEEEEEEEEEECCCCCEEEEEEEEecchhhhc
Confidence 99999999999999999999999999999999999986
No 304
>3bwl_A Sensor protein; structural genomics, APC87707.1, PAS domain, HTR-like protei protein structure initiative; HET: MSE I3A; 1.73A {Haloarcula marismortui atcc 43049}
Probab=99.52 E-value=2.9e-14 Score=134.49 Aligned_cols=124 Identities=17% Similarity=0.158 Sum_probs=95.1
Q ss_pred cccccccccccccchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHc--CCCCCcCCCCCCChHHH
Q 001869 173 EMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVV--GRNCRFLQGAGTDPEDV 250 (1002)
Q Consensus 173 dit~~~~~e~~L~~~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEli--G~~~~~l~~~~~~~~~~ 250 (1002)
++|++++++++|+++++.|+.++++++++|+++|. +|+|+++|++|++++||+.+|++ |+++..+.+ ......
T Consensus 1 ~~t~r~~~e~~L~~~~~~~~~l~e~~~~~i~~~d~---~g~i~~~N~a~~~~~G~~~~el~g~g~~~~~~~~--~~~~~~ 75 (126)
T 3bwl_A 1 SNAERKRREKRLEETSSRLEALFENSPDMIDVLDA---DGTICEVNQRFCAELGYDESEVLGRSIWEFDLMF--DAEDVQ 75 (126)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCSSEEEEECT---TCBEEEECHHHHHHHTCCGGGTTTSBGGGTBTTC--CHHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHHhhCCcEEEEEcC---CCCEEEEcHHHHHHhCCCHHHHhhCCCchhhccC--CHHHHH
Confidence 47889999999999999999999999999999998 88899999999999999999994 566655555 212221
Q ss_pred HHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccc
Q 001869 251 AKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (1002)
Q Consensus 251 ~~i~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DIT 304 (1002)
..+. ....+.....+.++.++||+.+|++++..++.+ +|. .+++++++|||
T Consensus 76 ~~~~-~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~~~~-~~~-~~~~~~~~DIT 126 (126)
T 3bwl_A 76 TQLS-GFSVDERRKFEGLYERRDGSTMSVEVHLLRFNL-EGE-DRFLAISRDIT 126 (126)
T ss_dssp HHHH-TCCTTCEEEEEEEEECTTSCEEEEEEEEEEEEE-TTE-EEEEEEEEEC-
T ss_pred HHHH-HHhcCCCcceEEEEEeCCCCEEEEEEEeEEEec-CCc-EEEEEEEEeCC
Confidence 1111 112234455667778999999999998888743 343 46789999998
No 305
>3kx0_X Uncharacterized protein RV1364C/MT1410; PAS domain, sensory domain, mycobacteium tuberculos molecule binding domain; 2.30A {Mycobacterium tuberculosis}
Probab=99.51 E-value=4.2e-14 Score=144.21 Aligned_cols=123 Identities=11% Similarity=0.127 Sum_probs=103.0
Q ss_pred cchHHHHHHHHHhcCCcEEEEe-CCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcE
Q 001869 185 PRVSDIVKDALSTFQQTFVVSD-ATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSY 263 (1002)
Q Consensus 185 ~~~~~~l~~ile~~~d~i~v~D-~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~ 263 (1002)
..+++.|+.++++++++|+++| . +|+|+++|++|++++||+ +++|+++..++++.........+..++..+...
T Consensus 33 ~~~~~~l~~l~~~~~~~i~~~d~~---~g~i~~~N~a~~~l~G~~--~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 107 (185)
T 3kx0_X 33 VGAAEDVRRIFEHIPAILVGLEGP---DHRFVAVNAAYRGFSPLL--DTVGQPAREVYPELEGQQIYEMLDRVYQTGEPQ 107 (185)
T ss_dssp TCCHHHHHHHHHHCSSEEEEEETT---TTEEEEECHHHHHHCCCC--SCTTSBHHHHCTTSCSSSSHHHHHHHHHHCCCE
T ss_pred hhhHHHHHHHHhcCCceEEEEECC---CcEEEEEcHHHHHHcCCc--cccCCcHHHHCCchhhhhHHHHHHHHHHcCCcc
Confidence 4667899999999999999999 7 888999999999999999 899999888877776655667788888888876
Q ss_pred EEEEEEE---ecC--CcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHH
Q 001869 264 CGRLLNY---KKD--GTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKD 312 (1002)
Q Consensus 264 ~~e~~~~---~kd--G~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~ 312 (1002)
..+...+ +++ |..+|+.+++.|++|.+|.+.+++++++|||++|++|++
T Consensus 108 ~~~~~~~~~~~~~~gg~~~~~~~~~~pi~~~~g~~~g~~~~~~DITerk~~e~~ 161 (185)
T 3kx0_X 108 SGSEWRLQTDYDGSGVEERYFDFVVTPRRRADGSIEGVQLIVDDVTSRVRARQA 161 (185)
T ss_dssp EEEEEEEC--------CCEEEEEEEEEEECTTSCEEEEEEEEEECHHHHTTCC-
T ss_pred cccceeEEeeccCCCCccEEEEEEEEEEECCCCCEEEEEEEEEeCCHHHHHHHH
Confidence 5543222 222 778899999999999999999999999999999999999
No 306
>3luq_A Sensor protein; PAS, histidine, kinase, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: PGE; 2.49A {Geobacter sulfurreducens}
Probab=99.51 E-value=1.1e-13 Score=126.79 Aligned_cols=113 Identities=12% Similarity=0.119 Sum_probs=93.4
Q ss_pred HHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEEEE
Q 001869 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRL 267 (1002)
Q Consensus 188 ~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~ 267 (1002)
++.|+.++++++++|+++|. +|+|+++|++|++++||+.++++|+++..++ ++........+..++.++.....+.
T Consensus 2 e~~~~~~~~~~~~~i~~~d~---~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (114)
T 3luq_A 2 DERLRLFTEHAPAALAMFDR---EMRYLAVSRRWREDYGLGDGDILGMSHYDIF-PEIGEEWKSVHRRGLAGEVIRVEED 77 (114)
T ss_dssp CHHHHHHHHTCSSEEEEEET---TCBEEEECHHHHHHTTCCSSCCTTCBHHHHC-TTCCHHHHHHHHHHHTTCCEEEEEE
T ss_pred hHHHHHHHhcCCceEEEEcC---CcEEEEECHHHHHHHCCCHHHHcCCcHHHHC-CccHHHHHHHHHHHhcCCcceeeee
Confidence 36789999999999999998 8889999999999999999999999988776 4445555555556665444444444
Q ss_pred EEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccc
Q 001869 268 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (1002)
Q Consensus 268 ~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DIT 304 (1002)
...+++|..+|+.+++.|+++.+|.+.+++++++|||
T Consensus 78 ~~~~~~g~~~~~~~~~~p~~~~~g~~~~~~~~~~DIT 114 (114)
T 3luq_A 78 CFVRADGRTQWLRWEVRPWYEGEGRVGGVVIFTEDIT 114 (114)
T ss_dssp EEEC--CCEEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred EEEcCCCcEEEEEEEEEEeECCCCCEEEEEEEEeeCC
Confidence 7789999999999999999999999999999999998
No 307
>3sw1_A Sensory box protein; light-oxygen-voltage, LOV, PAS, signaling protein; HET: FMN; 2.63A {Pseudomonas putida}
Probab=99.50 E-value=4.4e-14 Score=139.29 Aligned_cols=121 Identities=34% Similarity=0.593 Sum_probs=109.5
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001869 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (1002)
Q Consensus 474 l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~ 553 (1002)
++.++++++++|+++|.+|.+++|+++|++|++++||+.++++|+++..+.++.........+...+..+..+..++...
T Consensus 27 ~~~i~~~~~~~i~~~d~~~~~~~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (162)
T 3sw1_A 27 LQSMVDASNDGIVVAEKEGDDTILIYVNAAFEYLTGYSRDEILYQDCRFLQGDDRDQLGRARIRKAMAEGRPCREVLRNY 106 (162)
T ss_dssp HHHHHHTCSSEEEEEEEETTEEEEEEECHHHHHHHTCCHHHHTTSBGGGGTTTCCCCHHHHHHHHHHHHTCCEEEEEEEE
T ss_pred HHHHHhhccCcEEEEeCCCCccEEEEECHHHHHHHCCCHHHHcCCCcceecCCCcCHHHHHHHHHHHhcCCCCcceEEEE
Confidence 89999999999999999771113999999999999999999999998888888777777788888898999999999999
Q ss_pred ecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCccccccc
Q 001869 554 TKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLR 594 (1002)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e~ 594 (1002)
+++|..+|+.+++.|+.+.+|.+.+++++++|||++|+.++
T Consensus 107 ~~~g~~~~~~~~~~~i~~~~g~~~~~~~~~~DiTe~k~~e~ 147 (162)
T 3sw1_A 107 RKDGSAFWNELSITPVKSDFDQRTYFIGIQKDVSRQVELER 147 (162)
T ss_dssp CTTCCEEEEEEEEEEEECSSSSCEEEEEEEEECHHHHHHHH
T ss_pred CCCCCEEEEEEEEEEeecCCCCEEEEEEEEEeCcHHHHHHH
Confidence 99999999999999999999999999999999999998643
No 308
>4dj3_A Period circadian protein homolog 3; PAS domain, circadian rhythm, protein binding; 2.50A {Mus musculus}
Probab=99.50 E-value=1.4e-12 Score=143.93 Aligned_cols=106 Identities=13% Similarity=0.133 Sum_probs=90.1
Q ss_pred ccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCc---EEEEEEEEecCCCE
Q 001869 483 KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD---VTVQLINYTKSGNK 559 (1002)
Q Consensus 483 ~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~---~~~e~~~~~kdG~~ 559 (1002)
.-+...+.+|+ |+|||+++.+++||.++|++|+++..++||++.....+.+...+..+.. ...++|++++||++
T Consensus 175 ~Fitrh~~dG~---~~yvs~~~~~lLGY~peELig~s~~~~vHPdD~~~~~~~~~~~l~~~~~~~f~s~~yR~~~kdG~~ 251 (317)
T 4dj3_A 175 IFTTTHTPGCV---FLEVDERAVPLLGYLPQDLIGTSILTYLHPEDRPLMVAIHQKVLKYAGHPPFEHSPVRFCTQNGEY 251 (317)
T ss_dssp EEEEEECTTSB---EEEECTTHHHHHSCCHHHHTTSBGGGGBCTTTTTHHHHHHHHHHHTTTSCCEECCCEEEECTTSCE
T ss_pred ceEEEecCCCe---EEEEChHHhhhcCcChHHHcCCCHHHeECHHHHHHHHHHHHHHHHcCCCccccceEEEEEccCCCE
Confidence 55677778666 9999999999999999999999999999999999888888888887654 45789999999999
Q ss_pred EEEEEEEEeeeCC-CCCEEEEEEEEecCCcccc
Q 001869 560 FWNLFHLQPMRDQ-KGEVQYFIGVQLDGSEHLE 591 (1002)
Q Consensus 560 ~wv~~~~~pi~d~-~G~v~~~vgi~~DITerk~ 591 (1002)
+|++....+++|. .+++.++++.-+-|+....
T Consensus 252 vwvet~~~~~~np~s~~~e~II~~h~v~~~p~~ 284 (317)
T 4dj3_A 252 VILDSSWSSFVNPWSRKVSFIIGRHKVRTSPLN 284 (317)
T ss_dssp EEEEEEEEEEECSSSCCEEEEEEEEEECCCCSS
T ss_pred EEEEEEEEEEECCCCCcccEEEEEEEeccCCCC
Confidence 9999999999986 5677788888775555443
No 309
>3h9w_A Diguanylate cyclase with PAS/PAC sensor; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.90A {Marinobacter aquaeolei}
Probab=99.50 E-value=4.1e-14 Score=131.58 Aligned_cols=112 Identities=13% Similarity=0.100 Sum_probs=96.6
Q ss_pred cCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCC-CCcCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCcE
Q 001869 198 FQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRN-CRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTP 276 (1002)
Q Consensus 198 ~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~-~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~ 276 (1002)
++++++.+|.. +|+++|+|+++++++||++++++|.. +..+++|++.......+...+..+..+..+++++++||..
T Consensus 2 a~~giw~~d~~--~~~~~~~n~~~~~l~G~~~~e~~~~~~~~~~ihpdd~~~~~~~~~~~~~~~~~~~~e~r~~~~dG~~ 79 (115)
T 3h9w_A 2 TKAIPWKINWQ--TMAFEYIGPQIEALLGWPQGSWKSVEDWATRMHPEDQEWVVNFCVKQSECGVDHEADYRALHRDGHY 79 (115)
T ss_dssp -CCEEEEEETT--TTEEEEECTHHHHHHCSCGGGCCBHHHHHHSBCHHHHHHHHHHHHHHHHTTCCEEEEEEEECTTSCE
T ss_pred cceEEEEEEcC--CCcEEEEChhHHHHhCCChHHccCHHHHHHhcCHHHHHHHHHHHHHHHhcCCcccEEEEEEcCCCCE
Confidence 46789999943 77799999999999999999999832 2357788777777788888899988899999999999999
Q ss_pred EEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHH
Q 001869 277 FWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAK 311 (1002)
Q Consensus 277 ~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~ 311 (1002)
+|+..+..|++|++|.+++++|++.|||++|++|+
T Consensus 80 ~w~~~~~~~~~d~~G~~~~~~G~~~Dit~~k~~~~ 114 (115)
T 3h9w_A 80 VWIRDVVHVVRDDSGEVEALIGFMFDISLEHHHHH 114 (115)
T ss_dssp EEEEEEEEEEECTTSCEEEEEEEEEECGGGGC---
T ss_pred EEEEEEEEEEECCCCCEEEEEEEEeccCccccccc
Confidence 99999999999999999999999999999999875
No 310
>3bwl_A Sensor protein; structural genomics, APC87707.1, PAS domain, HTR-like protei protein structure initiative; HET: MSE I3A; 1.73A {Haloarcula marismortui atcc 43049}
Probab=99.48 E-value=2.4e-13 Score=128.12 Aligned_cols=122 Identities=16% Similarity=0.145 Sum_probs=92.2
Q ss_pred chhhHHHHHHHhhc-ccHHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhc--CCCCccccCCCCCHHHHH
Q 001869 458 SVDDKVRQKEMRKG-IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEIL--GRNCRFLQGPETDPATVR 534 (1002)
Q Consensus 458 ~~~~~~~~~~l~~~-~~l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEli--Gk~~~~l~~~~~~~~~~~ 534 (1002)
+++|++.++++++. ..|+.++++++++|+++|.+|. |+++|++|++++||+.+|++ |++...+.+ +......
T Consensus 2 ~t~r~~~e~~L~~~~~~~~~l~e~~~~~i~~~d~~g~---i~~~N~a~~~~~G~~~~el~g~g~~~~~~~~--~~~~~~~ 76 (126)
T 3bwl_A 2 NAERKRREKRLEETSSRLEALFENSPDMIDVLDADGT---ICEVNQRFCAELGYDESEVLGRSIWEFDLMF--DAEDVQT 76 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSSEEEEECTTCB---EEEECHHHHHHHTCCGGGTTTSBGGGTBTTC--CHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHhhCCcEEEEEcCCCC---EEEEcHHHHHHhCCCHHHHhhCCCchhhccC--CHHHHHH
Confidence 67899999999766 6699999999999999999776 99999999999999999994 566655655 2222222
Q ss_pred HHHHHHhcCCcEEEEEEEEecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCC
Q 001869 535 KIRAAIDNQTDVTVQLINYTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (1002)
Q Consensus 535 ~l~~~l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DIT 587 (1002)
.+. ....+.....+.++.++||+.+|+.++..++.+ +|. .+++++++|||
T Consensus 77 ~~~-~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~~~~-~~~-~~~~~~~~DIT 126 (126)
T 3bwl_A 77 QLS-GFSVDERRKFEGLYERRDGSTMSVEVHLLRFNL-EGE-DRFLAISRDIT 126 (126)
T ss_dssp HHH-TCCTTCEEEEEEEEECTTSCEEEEEEEEEEEEE-TTE-EEEEEEEEEC-
T ss_pred HHH-HHhcCCCcceEEEEEeCCCCEEEEEEEeEEEec-CCc-EEEEEEEEeCC
Confidence 211 112334456677788999999999998888743 444 45789999998
No 311
>3k3c_A Protein RV1364C/MT1410; sensor, PAS, signal transduction, fatty-acid binding, sigma regulator, signaling protein; HET: PLM; 1.62A {Mycobacterium tuberculosis} PDB: 3k3d_A
Probab=99.48 E-value=1e-13 Score=136.55 Aligned_cols=122 Identities=11% Similarity=0.085 Sum_probs=100.7
Q ss_pred HhhcccHHHHHHhccccEEEEc-CCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcE
Q 001869 468 MRKGIDLATTLERIEKNFVITD-PRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDV 546 (1002)
Q Consensus 468 l~~~~~l~~i~e~~~~~I~i~D-~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~ 546 (1002)
++....|+.++++++++|+++| .+|+ |+++|++|++++||+ +++|+++..+.++.........+..++..+...
T Consensus 13 ~~~~~~~~~~~~~~~~~i~~~d~~~~~---i~~~N~~~~~~~g~~--~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 87 (158)
T 3k3c_A 13 VGAAEDVRRIFEHIPAILVGLEGPDHR---FVAVNAAYRGFSPLL--DTVGQPAREVYPELEGQQIYEMLDRVYQTGEPQ 87 (158)
T ss_dssp TCCHHHHHHHHHHCSSEEEEEETTTTE---EEEECHHHHHHCTTC--CSTTSBHHHHSGGGGGTTHHHHHHHHHHHCCCE
T ss_pred HHHHHHHHHHHhcCCceEEEEECCCcE---eHHHHHHHHHHcCCc--hhcCCcHHHhCCchhHHHHHHHHHHHHHhCCcc
Confidence 4444569999999999999999 8666 999999999999999 999999888877766555667788888788775
Q ss_pred EEEEE-E--Eec-C-CCEEEEEEEEEeeeCCCCCEEEEEEEEecCCccccccc
Q 001869 547 TVQLI-N--YTK-S-GNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLR 594 (1002)
Q Consensus 547 ~~e~~-~--~~k-d-G~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e~ 594 (1002)
..+.. . .+. + |..+|+.++..|+++.+|.+.+++++++|||++|++++
T Consensus 88 ~~~~~~~~~~~~~~~g~~~~~~~~~~pi~~~~g~~~g~~~~~~DITe~k~~e~ 140 (158)
T 3k3c_A 88 SGSEWRLQTDYDGSGVEERYFDFVVTPRRRADGSIEGVQLIVDDVTSRVRARQ 140 (158)
T ss_dssp EEEEEEEEEESSSSCEEEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHHHHH
T ss_pred cccceeEEeccCCCCcceEEEEEEEEEeECCCCCEEEEEEEEEehhHHHHHHH
Confidence 54433 2 222 2 77899999999999999999999999999999998643
No 312
>3mxq_A Sensor protein; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.78A {Vibrio cholerae o1 biovar el tor}
Probab=99.47 E-value=5.7e-14 Score=138.52 Aligned_cols=117 Identities=14% Similarity=0.179 Sum_probs=92.7
Q ss_pred ccHHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEE--
Q 001869 472 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQ-- 549 (1002)
Q Consensus 472 ~~l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e-- 549 (1002)
..|+.+++++++||+++|.+|+ |++||+++++++|++++|++|++...+.+. ........+..++..|.+....
T Consensus 22 ~~l~~il~~~~~gi~v~D~~g~---I~~~N~a~~~~~G~~~~eviG~~~~~~~p~-~~~~~~~~l~~vl~~G~~~~~~~~ 97 (152)
T 3mxq_A 22 LLLSELLDQLSFALCIVRNDYV---IVKVNEYFESRVIFDGETMQGKNILELFPE-SADYLKRKIDTALVIESSSFSSWE 97 (152)
T ss_dssp HHHHHHHHHHCCEEEEEETTSB---EEEECHHHHHTSSSCHHHHTTSBHHHHSGG-GHHHHHHHHHHHHHHTSCEEEECC
T ss_pred HHHHHHHhcCCCCEEEEcCCCE---EEEECHHHHHHHCcCHHHHCCCCHHHhcCC-hHHHHHHHHHHHHhcCCceeeecc
Confidence 3489999999999999999777 999999999999999999999998888776 4455666788888877653221
Q ss_pred -------EEE---EecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCccccc
Q 001869 550 -------LIN---YTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEP 592 (1002)
Q Consensus 550 -------~~~---~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~ 592 (1002)
++. ..++|..+|..+++.|++|++|++.+++.+++|||+++++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~ti~Pl~d~~G~v~gv~~ii~DVTe~~~a 150 (152)
T 3mxq_A 98 QKPHLLPFKSSRPVSGEEEQMYQNLEVIPIHSEDGTIEHVCLCVYDVTIQASQ 150 (152)
T ss_dssp SSSCSSCC----------CCEEEEEEEEEEECTTSCEEEEEEEEEEEECC---
T ss_pred cccccccccccCCCCCCCcEEEEEEEEEEEECCCCCEEEEEEEEEECCHHHhc
Confidence 111 2357788899999999999999999999999999999864
No 313
>3luq_A Sensor protein; PAS, histidine, kinase, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: PGE; 2.49A {Geobacter sulfurreducens}
Probab=99.47 E-value=3.3e-13 Score=123.69 Aligned_cols=110 Identities=15% Similarity=0.135 Sum_probs=91.9
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001869 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (1002)
Q Consensus 474 l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~ 553 (1002)
|+.++++++++|+++|.+|+ |+++|+++++++||+.++++|++...+. |++.......+...+.++.....+..+.
T Consensus 5 ~~~~~~~~~~~i~~~d~~g~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (114)
T 3luq_A 5 LRLFTEHAPAALAMFDREMR---YLAVSRRWREDYGLGDGDILGMSHYDIF-PEIGEEWKSVHRRGLAGEVIRVEEDCFV 80 (114)
T ss_dssp HHHHHHTCSSEEEEEETTCB---EEEECHHHHHHTTCCSSCCTTCBHHHHC-TTCCHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred HHHHHhcCCceEEEEcCCcE---EEEECHHHHHHHCCCHHHHcCCcHHHHC-CccHHHHHHHHHHHhcCCcceeeeeEEE
Confidence 78999999999999999766 9999999999999999999999987776 5555655555566655444344444778
Q ss_pred ecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCC
Q 001869 554 TKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (1002)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DIT 587 (1002)
+++|..+|+.++..|+++.+|.+.+++++++|||
T Consensus 81 ~~~g~~~~~~~~~~p~~~~~g~~~~~~~~~~DIT 114 (114)
T 3luq_A 81 RADGRTQWLRWEVRPWYEGEGRVGGVVIFTEDIT 114 (114)
T ss_dssp C--CCEEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred cCCCcEEEEEEEEEEeECCCCCEEEEEEEEeeCC
Confidence 9999999999999999999999999999999998
No 314
>2kdk_A ARYL hydrocarbon receptor nuclear translocator-LI 2; circadian clock, PAS domain, transcription, activator, biolo rhythms, DNA-binding, nucleus; NMR {Homo sapiens}
Probab=99.47 E-value=2e-13 Score=127.71 Aligned_cols=114 Identities=13% Similarity=0.111 Sum_probs=98.5
Q ss_pred HHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcC-CcEEEEEEEE
Q 001869 475 ATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQ-TDVTVQLINY 553 (1002)
Q Consensus 475 ~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~-~~~~~e~~~~ 553 (1002)
..++++++++|+++|.+|. |+++|+++++++||+++|++|+++..+++|++.......+...+..+ .....+++++
T Consensus 6 ~~~~~~~~~~i~~~d~~g~---i~~~N~~~~~~~G~~~~el~g~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~e~r~~ 82 (121)
T 2kdk_A 6 GEINVKPTEFITRFAVNGK---FVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAVLQSKEKILTDSYKFR 82 (121)
T ss_dssp TCCCCCSSEEEEEECTTSB---EEEECTHHHHHTCCCTTTSBTSBTTTTBCSSSHHHHHHHHHHHHTSSSCEEEEEEEEE
T ss_pred cccccCCccEEEEECCCee---EEEEChhHHHHHCCCHHHHcCCcHHHeeCHHHHHHHHHHHHHHHhCCCCCccEEEEEE
Confidence 4466788999999999777 99999999999999999999999888889988777777777777654 4468899999
Q ss_pred ecCCCEEEEEEEEEeeeCCC-CCEEEEEEEEecCCcccc
Q 001869 554 TKSGNKFWNLFHLQPMRDQK-GEVQYFIGVQLDGSEHLE 591 (1002)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~-G~v~~~vgi~~DITerk~ 591 (1002)
++||+.+|+.++..|++|.. |.+.+++++.+|||+.++
T Consensus 83 ~~dG~~~~~~~~~~~~~d~~~~~~~~~v~~~~~i~~~~~ 121 (121)
T 2kdk_A 83 AKDGSFVTLKSQWFSFTNPDTKELEYIVSVNTLVLGHSE 121 (121)
T ss_dssp CSSSCEEEEEEEEEEEECCSSSCEEEEEEEEECCSSCCC
T ss_pred EcCCCEEEEEEEEEEEECCCCCeeeEEEEEEEeccccCC
Confidence 99999999999999999875 567789999999998763
No 315
>3eeh_A Putative light and redox sensing histidine kinase; structural genomic MCSG, protein structure initiative, midwest center for STRU genomics; HET: PG5; 1.95A {Haloarcula marismortui}
Probab=99.46 E-value=1.4e-13 Score=127.48 Aligned_cols=121 Identities=11% Similarity=0.133 Sum_probs=97.8
Q ss_pred ccccccchHHHHHHHHHhcCCcEEEEeCCCCC-CcEEEcchHHHHHcCCChhHHcCCC--CCcCCCCCCChHHHHHHHHH
Q 001869 180 KEKGLPRVSDIVKDALSTFQQTFVVSDATKPD-YPIMYASAGFFKMTGYTSKEVVGRN--CRFLQGAGTDPEDVAKIRET 256 (1002)
Q Consensus 180 ~e~~L~~~~~~l~~ile~~~d~i~v~D~~~~d-G~I~~~N~a~~~l~Gys~eEliG~~--~~~l~~~~~~~~~~~~i~~~ 256 (1002)
++++|+++++.|+.++++++++++++|. + |+|+++|+++++++||+.++++|.. +..+.+++........+..
T Consensus 2 ~e~~l~~~~~~~~~~~~~~~~~i~~~d~---~~~~i~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 77 (125)
T 3eeh_A 2 AKQQAAKSERRVRELTEATNDILWEFTA---DLSEVLVINSAYEDIWGRSVAKLRENPHDFLNGIHPEDRELMKDTMQS- 77 (125)
T ss_dssp --------CHHHHHHHSCCCCEEEEEET---TSSCEEEECTHHHHHHSSCHHHHHHCGGGGGGGBCHHHHHHHHHHHHH-
T ss_pred hHHHHHHHHHHHHHHHhcCCceEEEEEc---CCCcEEEecHHHHHHHCCCHHHHccCcHHHHHhcCHHHHHHHHHHHHH-
Confidence 4667888889999999999999999998 6 7799999999999999999999987 3445555544444444444
Q ss_pred HHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccc
Q 001869 257 LQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (1002)
Q Consensus 257 l~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DIT 304 (1002)
+..+..+..+++..+++|..+|+.+++.|+.+.+|.+.+++++++|||
T Consensus 78 ~~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DIT 125 (125)
T 3eeh_A 78 LMDGESADVECRVNATEEYQRWVWIQGEPITNDAGETVRVAGFARDIT 125 (125)
T ss_dssp HHTTCCEEEEEEECGGGTTCEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred HHcCCCccEEEEEEcCCCCEEEEEEecEEEECCCCCEEEEEEEEEecC
Confidence 667777888999999999999999999999999999999999999997
No 316
>2v0u_A NPH1-1, LOV2; kinase, transferase, ATP-binding, serine/threonine-protein kinase, light-induced signal trans phototropin1, nucleotide-binding; HET: FMN; 1.40A {Avena sativa} PDB: 2v0w_A* 2v1b_A* 2v1a_A* 1jnu_A* 1g28_A*
Probab=99.46 E-value=8.7e-13 Score=125.48 Aligned_cols=120 Identities=41% Similarity=0.823 Sum_probs=106.9
Q ss_pred HHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEe
Q 001869 192 KDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYK 271 (1002)
Q Consensus 192 ~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~ 271 (1002)
+.++++++++++++|..+.+|+|+++|+++++++||+.++++|+++..+.++.........+...+..+..+..++...+
T Consensus 5 ~~~~~~~~~~i~~~d~~~~~~~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (146)
T 2v0u_A 5 ATTLERIEKNFVITDPRLPDNPIIFASDSFLQLTEYSREEILGRNCRFLQGPETDRATVRKIRDAIDNQTEVTVQLINYT 84 (146)
T ss_dssp CCTGGGSSSCEEEECTTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEEEC
T ss_pred HHHHhcCCCcEEEEcCCCCCceEEEEcHHHHHHHCcCHHHHcCCCHHHhcCCcCChHHHHHHHHHHhcCCCcceEEEEEe
Confidence 45689999999999873335669999999999999999999999998888888777778888888999999999999999
Q ss_pred cCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHH
Q 001869 272 KDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAK 311 (1002)
Q Consensus 272 kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~ 311 (1002)
++|..+|+.++..|+.+.+|.+.+++++++|||++++.++
T Consensus 85 ~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~~~~ 124 (146)
T 2v0u_A 85 KSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVRDAA 124 (146)
T ss_dssp TTCCEEEEEEEEEEEECTTSCEEEEEEEEEEESSCCCHHH
T ss_pred cCCcEEEEEEEEEEeECCCCCEEEEEEEEeechHHHHHHH
Confidence 9999999999999999999999999999999999998433
No 317
>3kx0_X Uncharacterized protein RV1364C/MT1410; PAS domain, sensory domain, mycobacteium tuberculos molecule binding domain; 2.30A {Mycobacterium tuberculosis}
Probab=99.45 E-value=1.5e-13 Score=140.02 Aligned_cols=141 Identities=11% Similarity=0.122 Sum_probs=99.7
Q ss_pred HhhcccHHHHHHhccccEEEEc-CCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcE
Q 001869 468 MRKGIDLATTLERIEKNFVITD-PRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDV 546 (1002)
Q Consensus 468 l~~~~~l~~i~e~~~~~I~i~D-~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~ 546 (1002)
++....|+.++++++++|+++| .+|+ |+++|++|++++||+ +++|+++..+.++.........+..++..+...
T Consensus 33 ~~~~~~l~~l~~~~~~~i~~~d~~~g~---i~~~N~a~~~l~G~~--~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 107 (185)
T 3kx0_X 33 VGAAEDVRRIFEHIPAILVGLEGPDHR---FVAVNAAYRGFSPLL--DTVGQPAREVYPELEGQQIYEMLDRVYQTGEPQ 107 (185)
T ss_dssp TCCHHHHHHHHHHCSSEEEEEETTTTE---EEEECHHHHHHCCCC--SCTTSBHHHHCTTSCSSSSHHHHHHHHHHCCCE
T ss_pred hhhHHHHHHHHhcCCceEEEEECCCcE---EEEEcHHHHHHcCCc--cccCCcHHHHCCchhhhhHHHHHHHHHHcCCcc
Confidence 3333558999999999999999 8666 999999999999999 999999888887776655666777888788776
Q ss_pred EEEEEEE---ecC--CCEEEEEEEEEeeeCCCCCEEEEEEEEecCCccccccccCCchhhhHHHHHHHHHHhhh
Q 001869 547 TVQLINY---TKS--GNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAEN 615 (1002)
Q Consensus 547 ~~e~~~~---~kd--G~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e~~~~~~~~~~e~~~~~~~~~~~ 615 (1002)
..+.... +++ |..+|+.++..|+++.+|.+.+++++++|||++|++|+++ ...+++.++.++.++..
T Consensus 108 ~~~~~~~~~~~~~~gg~~~~~~~~~~pi~~~~g~~~g~~~~~~DITerk~~e~~~--~~ll~~~~~~l~~~~~~ 179 (185)
T 3kx0_X 108 SGSEWRLQTDYDGSGVEERYFDFVVTPRRRADGSIEGVQLIVDDVTSRVRARQAA--EARVEELSERYRNVRDS 179 (185)
T ss_dssp EEEEEEEC--------CCEEEEEEEEEEECTTSCEEEEEEEEEECHHHHTTCC---------------------
T ss_pred cccceeEEeeccCCCCccEEEEEEEEEEECCCCCEEEEEEEEEeCCHHHHHHHHH--HHHHHHHHHHHHHHHhh
Confidence 5553322 222 7889999999999999999999999999999999986652 11234444544444443
No 318
>1byw_A Protein (human ERG potassium channel); PAS domain, potassium channel domain, membrane protein; 2.60A {Homo sapiens} SCOP: d.110.3.6
Probab=99.45 E-value=1.4e-12 Score=117.22 Aligned_cols=107 Identities=29% Similarity=0.579 Sum_probs=94.9
Q ss_pred CcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCC--CCcCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCcEE
Q 001869 200 QTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRN--CRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPF 277 (1002)
Q Consensus 200 d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~--~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~ 277 (1002)
++|+++|....+|+|+++|++|++++||+.++++|++ ...+.++.........+...+..+..+..+...++++|..+
T Consensus 2 ~~i~i~d~~~~~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 81 (110)
T 1byw_A 2 RKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPCTQRRAAAQIAQALLGAEERKVEIAFYRKDGSCF 81 (110)
T ss_dssp CEEEEEETTSSSCBEEEECHHHHHHHTCCHHHHTTSBTTCGGGCCTTCCHHHHHHHHHHHHTTCCEEEEEEEECTTSCEE
T ss_pred CCEEEEeccCCCCcEEEECHHHHHHhCCCHHHHccCCCccccccCCcCCHHHHHHHHHHHhcCCCceEEEEEEcCCCCEE
Confidence 5889999866679999999999999999999999998 45666666666667778888888888889998899999999
Q ss_pred EEEEEeeeeecCCCCEEEEEEEEeccchh
Q 001869 278 WNLLTIAPIKDDEGKVLKFIGMQVEVSKH 306 (1002)
Q Consensus 278 w~~~~~~pi~d~~G~v~~~v~~~~DITer 306 (1002)
|+.+++.|+.+.+|.+.+++++++|||++
T Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~DiTe~ 110 (110)
T 1byw_A 82 LCLVDVVPVKNEDGAVIMFILNFEVVMEK 110 (110)
T ss_dssp EEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred EEEEEEEEeecCCCCEEEEEEEEEeccCC
Confidence 99999999999999999999999999975
No 319
>3icy_A Sensor protein; sensory box histidine kinase/response regulator domain, kinase, chlorobium tepidum TLS, PSI-2; 2.68A {Chlorobaculum tepidum}
Probab=99.45 E-value=9.1e-14 Score=128.66 Aligned_cols=112 Identities=11% Similarity=0.028 Sum_probs=103.3
Q ss_pred cHHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCC--CccccCCCCCHHHHHHHHHHHhcCCcEEEEE
Q 001869 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRN--CRFLQGPETDPATVRKIRAAIDNQTDVTVQL 550 (1002)
Q Consensus 473 ~l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~--~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~ 550 (1002)
.|+.++++++++++.+|.+|. ++++|+++++++||+.++++|.. +..+++|++.......+...+..+..+..|+
T Consensus 5 ~~~~l~~~~~~~i~~~d~~~~---~~~~n~~~~~~~G~~~~~~~~~~~~~~~~i~p~d~~~~~~~~~~~~~~~~~~~~e~ 81 (118)
T 3icy_A 5 ELQALVDNIPAAIYHLDVSGQ---ATIRFRPPAFLKTLVSEHAGTTRLNTLSMIHHDDRHMLSNAYSKLREAKHSLTLVY 81 (118)
T ss_dssp HHHHHHTTCCCCCEEECTTSC---EEECCCCCGGGGGGEEEETTEEEEGGGGGBCGGGHHHHHHHHHHHHHSCCEEEEEE
T ss_pred HHHHHHhcCCceEEEEEcCCC---ceEEechhHhhcCCCHHHccCChhHHHHHcCHHHHHHHHHHHHHHHhcCCCceEEE
Confidence 389999999999999999777 99999999999999999998875 3567889988888888888888888999999
Q ss_pred EEEecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCC
Q 001869 551 INYTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (1002)
Q Consensus 551 ~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DIT 587 (1002)
++++++|+.+|+.....|+++++|.+.+++|+++|||
T Consensus 82 r~~~~~g~~~w~~~~~~~~~~~~g~~~~~~g~~~DIT 118 (118)
T 3icy_A 82 RIVTPEGKLHWIEDHMRSSFSDDGLFSGIDGILCEVT 118 (118)
T ss_dssp EEECTTCCEEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred EEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEecC
Confidence 9999999999999999999999999999999999998
No 320
>4dj2_A Period circadian protein homolog 1; PAS domains, circadian clock protein, protein binding; 2.75A {Mus musculus}
Probab=99.44 E-value=7.7e-13 Score=146.11 Aligned_cols=108 Identities=11% Similarity=0.095 Sum_probs=92.2
Q ss_pred cccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhc-CCcE-EEEEEEEecCCCE
Q 001869 482 EKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDN-QTDV-TVQLINYTKSGNK 559 (1002)
Q Consensus 482 ~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~-~~~~-~~e~~~~~kdG~~ 559 (1002)
.+.+...+.+|+ |+|+|+++..++||.++|++|+++..++||++.....+.+...+.. +... ..++|++++||++
T Consensus 176 ~~Fitrh~~dG~---~~yvd~~~~~lLGY~peELig~s~~~~vHPdD~~~~~~~~~~~l~~~g~~~~~~~yR~~~kdG~~ 252 (320)
T 4dj2_A 176 RIFTTRHTPSCL---FQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLAGQPFDHSPIRFCARNGEY 252 (320)
T ss_dssp CEEEEEECTTCB---EEEECTTHHHHHSCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHTTSSSCCEECCCEEEECSSSCE
T ss_pred ceEEEEecCCce---EEEcCcceeccCCcChHHHcCCcHHHhCCHHHHHHHHHHHHHHHhcCCCcccceEEEEEccCCCE
Confidence 456777788666 9999999999999999999999999999999988887777777774 4445 3699999999999
Q ss_pred EEEEEEEEeeeCC-CCCEEEEEEEEecCCccccc
Q 001869 560 FWNLFHLQPMRDQ-KGEVQYFIGVQLDGSEHLEP 592 (1002)
Q Consensus 560 ~wv~~~~~pi~d~-~G~v~~~vgi~~DITerk~~ 592 (1002)
+|++....++++. .+++.+++|.-+-|+.....
T Consensus 253 vwvet~~~~~~np~s~~~e~II~~h~v~~gp~~~ 286 (320)
T 4dj2_A 253 VTMDTSWAGFVHPWSRKVAFVLGRHKVRTAPLNE 286 (320)
T ss_dssp EEEECEEEEEECTTTCSEEEEEEEEEESSCCSSC
T ss_pred EEEEEEEEEEECCCCCCccEEEEEEEEccCCCCC
Confidence 9999999999886 68888999998888876543
No 321
>3olo_A Two-component sensor histidine kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, TRA; 2.09A {Nostoc SP}
Probab=99.44 E-value=4.7e-13 Score=123.78 Aligned_cols=114 Identities=11% Similarity=0.098 Sum_probs=91.3
Q ss_pred cccccchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcC
Q 001869 181 EKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNG 260 (1002)
Q Consensus 181 e~~L~~~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g 260 (1002)
++++++..+.++.++++++++|+++|. +|+|+++|++|++++||+++|++|+++..+.+...... +..+..+
T Consensus 5 ~~~~e~~~~~~~~~~~~~~~~i~~~d~---~g~i~~~N~~~~~l~G~~~~el~g~~~~~~~~~~~~~~-----~~~~~~~ 76 (118)
T 3olo_A 5 NIQSELEFKFAHYLINNAVEASFCLGD---NWQFLYVNDATCRMTEYSREQLLSMNLQDIDVDFALHD-----WEEIRQK 76 (118)
T ss_dssp --CHHHHHHHHHHHHHHCSSEEEEECT---TSBEEEECHHHHHHHCCCHHHHTTCBGGGTBTTGGGSC-----HHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCceEEEECC---CCcEEEEHHHHHHHHCCCHHHHhCCChhhcccccCHHH-----HHHHHhc
Confidence 334556667889999999999999998 88899999999999999999999999887765543222 2334445
Q ss_pred CcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccc
Q 001869 261 QSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (1002)
Q Consensus 261 ~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DIT 304 (1002)
..+..+.+.++++|+.+|+.+++.|+.+.+ ..+++++++|||
T Consensus 77 ~~~~~e~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~DIT 118 (118)
T 3olo_A 77 NNYTFKTRYRSQSGRIFLVEMSLTFLEDQE--RRFSCVFVREKS 118 (118)
T ss_dssp SEEEEEEEEECTTCCEEEEEEEEEEEEETT--EEEEEEEEEEC-
T ss_pred CcEEEEEEEEccCCCEEEEEEEEEEEEECC--ccEEEEEEEeCC
Confidence 677889999999999999999999997643 346789999997
No 322
>2kdk_A ARYL hydrocarbon receptor nuclear translocator-LI 2; circadian clock, PAS domain, transcription, activator, biolo rhythms, DNA-binding, nucleus; NMR {Homo sapiens}
Probab=99.43 E-value=4.4e-13 Score=125.35 Aligned_cols=111 Identities=13% Similarity=0.098 Sum_probs=95.3
Q ss_pred HHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcC-CcEEEEEEEEec
Q 001869 194 ALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNG-QSYCGRLLNYKK 272 (1002)
Q Consensus 194 ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g-~~~~~e~~~~~k 272 (1002)
++++++++|+++|. +|+|+|+|+++++++||+++|++|+++..++++++.......+...+..+ .....+++++++
T Consensus 8 ~~~~~~~~i~~~d~---~g~i~~~N~~~~~~~G~~~~el~g~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~e~r~~~~ 84 (121)
T 2kdk_A 8 INVKPTEFITRFAV---NGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAVLQSKEKILTDSYKFRAK 84 (121)
T ss_dssp CCCCSSEEEEEECT---TSBEEEECTHHHHHTCCCTTTSBTSBTTTTBCSSSHHHHHHHHHHHHTSSSCEEEEEEEEECS
T ss_pred cccCCccEEEEECC---CeeEEEEChhHHHHHCCCHHHHcCCcHHHeeCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEc
Confidence 46788999999998 88899999999999999999999999888888877766666677777654 446788999999
Q ss_pred CCcEEEEEEEeeeeecCC-CCEEEEEEEEeccchhh
Q 001869 273 DGTPFWNLLTIAPIKDDE-GKVLKFIGMQVEVSKHT 307 (1002)
Q Consensus 273 dG~~~w~~~~~~pi~d~~-G~v~~~v~~~~DITerk 307 (1002)
||+.+|++++..|++|.+ |.+.+++++.+||++.+
T Consensus 85 dG~~~~~~~~~~~~~d~~~~~~~~~v~~~~~i~~~~ 120 (121)
T 2kdk_A 85 DGSFVTLKSQWFSFTNPDTKELEYIVSVNTLVLGHS 120 (121)
T ss_dssp SSCEEEEEEEEEEEECCSSSCEEEEEEEEECCSSCC
T ss_pred CCCEEEEEEEEEEEECCCCCeeeEEEEEEEeccccC
Confidence 999999999999999876 46677899999999865
No 323
>3d72_A Vivid PAS protein VVD; circadian, photoreceptor, blue-light, LOV, signaling protein; HET: FAD; 1.65A {Neurospora crassa} PDB: 3is2_A* 2pd8_A* 3hjk_A* 2pdr_A* 2pd7_A* 2pdt_A* 3hji_A* 3rh8_B*
Probab=99.43 E-value=6.3e-13 Score=129.26 Aligned_cols=124 Identities=32% Similarity=0.598 Sum_probs=103.7
Q ss_pred ccccccccccccccccchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCC----
Q 001869 170 SSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGT---- 245 (1002)
Q Consensus 170 ~~~dit~~~~~e~~L~~~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~---- 245 (1002)
...+++.++..+..+ .++++. ++|+++|..+.+|+|+++|++|++++||+.+|++|+++..+.+++.
T Consensus 15 ~~~~~~~r~~~~~~~--------~~~~~~-~~i~~~d~~d~~g~i~~~N~a~~~l~G~~~~el~g~~~~~l~~~~~~~~~ 85 (149)
T 3d72_A 15 YLIQIMNRPNPQVEL--------GPVDTS-VALILCDLKQKDTPIVYASEAFLYMTGYSNAEVLGRNCRFLQSPDGMVKP 85 (149)
T ss_dssp HHHHHHHCSSCSSCC--------CSCCTT-SCEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGGSTTSCCCT
T ss_pred eeehhhhCcchhHHH--------HhhcCC-ccEEEEeccCCCCcEEEECHHHHHHHCcCHHHHcCCChhHhCCccccccc
Confidence 346777666554332 345664 8999999544488899999999999999999999999988877763
Q ss_pred -------ChHHHHHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEec
Q 001869 246 -------DPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVE 302 (1002)
Q Consensus 246 -------~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~D 302 (1002)
.......+...+..+..+..+++.+++||+.+|+.++++|+++.+|.+.+++++++|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~i~~~~g~~~~~v~~~~D 149 (149)
T 3d72_A 86 KSTRKYVDSNTINTMRKAIDRNAEVQVEVVNFKKNGQRFVNFLTMIPVRDETGEYRYSMGFQCE 149 (149)
T ss_dssp TCCCSSSCHHHHHHHHHHHHHTCCEEEEEEEECTTCCEEEEEEEEEEEECTTSSEEEEEEECCC
T ss_pred cccccccChHHHHHHHHHHHCCCceEEEEEEECCCCCEEEEEEEEEEEEcCCCCEEEEEEEEeC
Confidence 666677788888888899999999999999999999999999999999999999887
No 324
>3gdi_A Period circadian protein homolog 2; tandem PAS domains, biological rhythms, cytoplasm, nucleus, phosphoprotein, transcription; 2.40A {Mus musculus}
Probab=99.43 E-value=1.3e-12 Score=143.83 Aligned_cols=106 Identities=9% Similarity=0.083 Sum_probs=90.6
Q ss_pred ccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCC-cEE-EEEEEEecCCCEE
Q 001869 483 KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQT-DVT-VQLINYTKSGNKF 560 (1002)
Q Consensus 483 ~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~-~~~-~e~~~~~kdG~~~ 560 (1002)
..+...+.+|+ |+|+|+++..++||.++|++|+++..++||++.....+.+...+..++ ... .++|+++|||+.+
T Consensus 166 ~Fitrh~~dG~---~~yvd~~~~~lLGY~peELig~s~~~~iHpdD~~~~~~~~~~~l~~~g~~~~~~~yR~~~kdG~~v 242 (309)
T 3gdi_A 166 IFTTTHTPNCL---FQAVDERAVPLLGYLPQDLIETPVLVQLHPSDRPLMLAIHKKILQAGGQPFDYSPIRFRTRNGEYI 242 (309)
T ss_dssp EEEEEECTTCB---EEEECTTHHHHHSCCHHHHTTSBHHHHBCTTSHHHHHHHHHHHHHTTTCCEEEEEEEEECTTSCEE
T ss_pred eEEEEecCCCe---EEEECcccccccCcCHHHHcCCCHHHhCCHHHHHHHHHHHHHHHhcCCceeeceEEEEEccCCCEE
Confidence 45677778666 999999999999999999999999999999998888888888887554 455 6999999999999
Q ss_pred EEEEEEEeeeCC-CCCEEEEEEEEecCCcccc
Q 001869 561 WNLFHLQPMRDQ-KGEVQYFIGVQLDGSEHLE 591 (1002)
Q Consensus 561 wv~~~~~pi~d~-~G~v~~~vgi~~DITerk~ 591 (1002)
|++....++++. .+++.+++|+-+-|+....
T Consensus 243 wvet~~~~~~np~s~~~e~ii~~h~v~~gp~~ 274 (309)
T 3gdi_A 243 TLDTSWSSFINPWSRKISFIIGRHKVRVGPLN 274 (309)
T ss_dssp EEEEEEEEEECTTTCCEEEEEEEEEEEECCSS
T ss_pred EEEEEEEEEECCCCCcccEEEEEEEEccCCCC
Confidence 999999999886 6788889999888776543
No 325
>1v9y_A Heme PAS sensor protein; signaling protein; HET: HEM; 1.32A {Escherichia coli} SCOP: d.110.3.2 PDB: 1v9z_A* 1vb6_A* 1s67_L* 1s66_L*
Probab=99.42 E-value=2.8e-13 Score=133.54 Aligned_cols=140 Identities=20% Similarity=0.273 Sum_probs=88.1
Q ss_pred ccccccccccccccccchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHH
Q 001869 170 SSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPED 249 (1002)
Q Consensus 170 ~~~dit~~~~~e~~L~~~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~ 249 (1002)
+..+++...+....+.+.++.|+.++++++++++++|. +|+|+++|+++++++||+.++++|+++..++++......
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~d~---~g~i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~~~~~ 97 (167)
T 1v9y_A 21 MRQDAEVIMKLTDADNAADGIFFPALEQNMMGAVLINE---NDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAH 97 (167)
T ss_dssp -------------------CCHHHHHHTCSSEEEEECT---TSBEEEECHHHHHHHSCCGGGTTTSBGGGGSCGGGTTTH
T ss_pred HHhhHHHHHHHHHHHhhhhHHHHHHHHhCCCCEEEECC---CCcEEEECHHHHHHhCCCHHHHcCCChhhccCccccchH
Confidence 34677777778888888889999999999999999998 888999999999999999999999998877776655555
Q ss_pred HHHHHHHHHcCCc----EEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhh
Q 001869 250 VAKIRETLQNGQS----YCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (1002)
Q Consensus 250 ~~~i~~~l~~g~~----~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~l~ 314 (1002)
...+......+.. +..+....+++|..+|+.+++.|+ +.+|.+ +++++++|||++++++++++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~g~~-~~~~~~~DiT~~~~~e~~l~ 164 (167)
T 1v9y_A 98 PEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKV-YYLALVRDASVEMAQKEQTR 164 (167)
T ss_dssp HHHHHHHHC----------CEEEEECTTSCEEEEEEEEEEE-EETTEE-EEEEEEEC------------
T ss_pred HHHHHHHhhcCCCcccccceEEEEEcCCCcEEEEEEEEEEE-ecCCCE-EEEEEEecCcHHHHHHHHHH
Confidence 5555555555433 455778889999999999999999 455665 48999999999999998876
No 326
>3icy_A Sensor protein; sensory box histidine kinase/response regulator domain, kinase, chlorobium tepidum TLS, PSI-2; 2.68A {Chlorobaculum tepidum}
Probab=99.42 E-value=1.7e-13 Score=126.74 Aligned_cols=115 Identities=9% Similarity=-0.035 Sum_probs=104.5
Q ss_pred hHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCC--CcCCCCCCChHHHHHHHHHHHcCCcEE
Q 001869 187 VSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNC--RFLQGAGTDPEDVAKIRETLQNGQSYC 264 (1002)
Q Consensus 187 ~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~--~~l~~~~~~~~~~~~i~~~l~~g~~~~ 264 (1002)
+++.|+.++++++++++.+|. +|.++++|+++++++||+.++++|... ..+++|++.......+...+..+..+.
T Consensus 2 s~~~~~~l~~~~~~~i~~~d~---~~~~~~~n~~~~~~~G~~~~~~~~~~~~~~~~i~p~d~~~~~~~~~~~~~~~~~~~ 78 (118)
T 3icy_A 2 NAEELQALVDNIPAAIYHLDV---SGQATIRFRPPAFLKTLVSEHAGTTRLNTLSMIHHDDRHMLSNAYSKLREAKHSLT 78 (118)
T ss_dssp HHHHHHHHHTTCCCCCEEECT---TSCEEECCCCCGGGGGGEEEETTEEEEGGGGGBCGGGHHHHHHHHHHHHHSCCEEE
T ss_pred cHHHHHHHHhcCCceEEEEEc---CCCceEEechhHhhcCCCHHHccCChhHHHHHcCHHHHHHHHHHHHHHHhcCCCce
Confidence 467899999999999999998 777999999999999999999988754 457788877777788888888888999
Q ss_pred EEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccc
Q 001869 265 GRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (1002)
Q Consensus 265 ~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DIT 304 (1002)
.+++.++++|..+|+.....|+++++|.+.+++|+++|||
T Consensus 79 ~e~r~~~~~g~~~w~~~~~~~~~~~~g~~~~~~g~~~DIT 118 (118)
T 3icy_A 79 LVYRIVTPEGKLHWIEDHMRSSFSDDGLFSGIDGILCEVT 118 (118)
T ss_dssp EEEEEECTTCCEEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred EEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEecC
Confidence 9999999999999999999999999999999999999998
No 327
>3eeh_A Putative light and redox sensing histidine kinase; structural genomic MCSG, protein structure initiative, midwest center for STRU genomics; HET: PG5; 1.95A {Haloarcula marismortui}
Probab=99.42 E-value=3.4e-13 Score=124.83 Aligned_cols=112 Identities=10% Similarity=0.087 Sum_probs=97.9
Q ss_pred ccHHHHHHhccccEEEEcCC-CCCCCEEecCHHHHHHcCCChhhhcCCC--CccccCCCCCHHHHHHHHHHHhcCCcEEE
Q 001869 472 IDLATTLERIEKNFVITDPR-LPDNPIIFASDSFLELTEYSREEILGRN--CRFLQGPETDPATVRKIRAAIDNQTDVTV 548 (1002)
Q Consensus 472 ~~l~~i~e~~~~~I~i~D~~-G~d~~I~~vN~a~~~l~Gys~eEliGk~--~~~l~~~~~~~~~~~~l~~~l~~~~~~~~ 548 (1002)
..|+.++++++++++++|.+ |. ++++|+++++++||+.++++|.+ +..++++++.......+.. +..+..+..
T Consensus 11 ~~~~~~~~~~~~~i~~~d~~~~~---i~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 86 (125)
T 3eeh_A 11 RRVRELTEATNDILWEFTADLSE---VLVINSAYEDIWGRSVAKLRENPHDFLNGIHPEDRELMKDTMQS-LMDGESADV 86 (125)
T ss_dssp HHHHHHHSCCCCEEEEEETTSSC---EEEECTHHHHHHSSCHHHHHHCGGGGGGGBCHHHHHHHHHHHHH-HHTTCCEEE
T ss_pred HHHHHHHhcCCceEEEEEcCCCc---EEEecHHHHHHHCCCHHHHccCcHHHHHhcCHHHHHHHHHHHHH-HHcCCCccE
Confidence 45899999999999999997 66 99999999999999999999987 4556677665555555554 667778899
Q ss_pred EEEEEecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCC
Q 001869 549 QLINYTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (1002)
Q Consensus 549 e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DIT 587 (1002)
++++.+++|..+|+.++..|+.+.+|.+.+++++++|||
T Consensus 87 e~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DIT 125 (125)
T 3eeh_A 87 ECRVNATEEYQRWVWIQGEPITNDAGETVRVAGFARDIT 125 (125)
T ss_dssp EEEECGGGTTCEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred EEEEEcCCCCEEEEEEecEEEECCCCCEEEEEEEEEecC
Confidence 999999999999999999999999999999999999998
No 328
>2l0w_A Potassium voltage-gated channel, subfamily H (EAG member 2, isoform CRA_B; HERG, PAS domain, voltage-gated potassium channel, membrane; NMR {Homo sapiens} PDB: 2l1m_A 2l4r_A
Probab=99.42 E-value=3.6e-12 Score=120.10 Aligned_cols=118 Identities=27% Similarity=0.537 Sum_probs=101.8
Q ss_pred HHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCC--CCcCCCCCCChHHHHHHHHHHHcCCcEEEE
Q 001869 189 DIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRN--CRFLQGAGTDPEDVAKIRETLQNGQSYCGR 266 (1002)
Q Consensus 189 ~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~--~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e 266 (1002)
+.+...+++++++++++|....+|+|+++|++|++++||+.++++|++ +..+.++.........+...+..+..+..+
T Consensus 19 ~~~~~~~~~~~~~i~~~d~~~~~g~i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (138)
T 2l0w_A 19 DTIIRKFEGQSRKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPRTQRRAAAQIAQALLGAEERKVE 98 (138)
T ss_dssp HHHHHHHTTTTSEEEEEESSSTTCBEEEECSHHHHHHSCCHHHHTTSBTTCGGGCCTTCCHHHHHHHHHHTTCSSCEEEE
T ss_pred HHHHHHHhcCCCCEEEEecCCCCCEEEEeCHHHHHHhCCCHHHHcCCCCcccccCCcccchhHHHHHHHHHhhcCCceeE
Confidence 445566777999999999733356799999999999999999999998 566777776666677788888888888889
Q ss_pred EEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchh
Q 001869 267 LLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKH 306 (1002)
Q Consensus 267 ~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITer 306 (1002)
...++++|..+|+.+++.|+.+.+|.+.+++++++|||++
T Consensus 99 ~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~ 138 (138)
T 2l0w_A 99 IAFYRKDGSCFLCLVDVVPVKNEDGAVIMFILNFEVVMEK 138 (138)
T ss_dssp EEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEC
T ss_pred EEEECCCCCEEEEEEEEEEEeCCCCCEEEEEEEEEeccCC
Confidence 9889999999999999999999999999999999999975
No 329
>3mjq_A Uncharacterized protein; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium; 2.60A {Desulfitobacterium hafniense}
Probab=99.40 E-value=4.9e-13 Score=125.09 Aligned_cols=118 Identities=20% Similarity=0.209 Sum_probs=91.0
Q ss_pred HHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEe
Q 001869 192 KDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYK 271 (1002)
Q Consensus 192 ~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~ 271 (1002)
+.++++++++|+++|. +|+|+++|+++++++||+.++++|+++..++++.........+...+.++.. ..+++..+
T Consensus 2 ~~l~~~~~~~i~~~d~---~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 77 (126)
T 3mjq_A 2 KNFLETIEDMILIINR---EGRLLYANTAVPKKLGYTHEELMSMHILTITSAGKMAEGEKILAELFAGKKE-SLPLSLEK 77 (126)
T ss_dssp CTTGGGCSSEEEEEET---TSBEEEECTHHHHHHSCCHHHHHHSBHHHHHCTTCHHHHHHHHHHHHHTCCS-EEEEEEEC
T ss_pred hhHHhhCCceEEEEeC---CCcEEEEcHHHHHHHCCCHHHHcCCCHHHHcCchhHHHHHHHHHHHHhCCCc-eeEEEEEc
Confidence 4578999999999998 7889999999999999999999999988777777666666666666766665 77888889
Q ss_pred cCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhc
Q 001869 272 KDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (1002)
Q Consensus 272 kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~l~~ 315 (1002)
++|..+|+.++..|+.+ +...+++++++|||++|++++++..
T Consensus 78 ~~g~~~~~~~~~~~~~~--~~~~~~~~~~~DITe~k~a~~~~~~ 119 (126)
T 3mjq_A 78 KEGTSIPAKARIWQGKW--HNEPCLFAIIKDLSKEERASSPPFL 119 (126)
T ss_dssp TTSCEEEEEEEEEEEES--SSSEEEEEEEEECC-----------
T ss_pred cCCCEEEEEEEEEeeeE--CCceEEEEEEEechHHHHhhcccch
Confidence 99999999999988764 3457889999999999999988663
No 330
>1byw_A Protein (human ERG potassium channel); PAS domain, potassium channel domain, membrane protein; 2.60A {Homo sapiens} SCOP: d.110.3.6
Probab=99.40 E-value=4.3e-12 Score=113.99 Aligned_cols=107 Identities=31% Similarity=0.553 Sum_probs=93.0
Q ss_pred ccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCC--CccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCCEE
Q 001869 483 KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRN--CRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGNKF 560 (1002)
Q Consensus 483 ~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~--~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG~~~ 560 (1002)
++|+++|....+++|+++|++|++++||+.++++|++ ...+.+++........+...+..+..+..+....+++|..+
T Consensus 2 ~~i~i~d~~~~~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 81 (110)
T 1byw_A 2 RKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPCTQRRAAAQIAQALLGAEERKVEIAFYRKDGSCF 81 (110)
T ss_dssp CEEEEEETTSSSCBEEEECHHHHHHHTCCHHHHTTSBTTCGGGCCTTCCHHHHHHHHHHHHTTCCEEEEEEEECTTSCEE
T ss_pred CCEEEEeccCCCCcEEEECHHHHHHhCCCHHHHccCCCccccccCCcCCHHHHHHHHHHHhcCCCceEEEEEEcCCCCEE
Confidence 5889999752235599999999999999999999998 55566666666667778888888888999999999999999
Q ss_pred EEEEEEEeeeCCCCCEEEEEEEEecCCcc
Q 001869 561 WNLFHLQPMRDQKGEVQYFIGVQLDGSEH 589 (1002)
Q Consensus 561 wv~~~~~pi~d~~G~v~~~vgi~~DITer 589 (1002)
|+.++..|+.+.+|.+.+++++++|||++
T Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~DiTe~ 110 (110)
T 1byw_A 82 LCLVDVVPVKNEDGAVIMFILNFEVVMEK 110 (110)
T ss_dssp EEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred EEEEEEEEeecCCCCEEEEEEEEEeccCC
Confidence 99999999999999999999999999985
No 331
>3olo_A Two-component sensor histidine kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, TRA; 2.09A {Nostoc SP}
Probab=99.39 E-value=1.3e-12 Score=120.77 Aligned_cols=104 Identities=17% Similarity=0.173 Sum_probs=85.7
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001869 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (1002)
Q Consensus 474 l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~ 553 (1002)
++.++++++++|+++|.+|. |+++|+++++++||+++|++|+++..+.++..... +..+..+..+..+.+++
T Consensus 15 ~~~~~~~~~~~i~~~d~~g~---i~~~N~~~~~l~G~~~~el~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~e~~~~ 86 (118)
T 3olo_A 15 AHYLINNAVEASFCLGDNWQ---FLYVNDATCRMTEYSREQLLSMNLQDIDVDFALHD-----WEEIRQKNNYTFKTRYR 86 (118)
T ss_dssp HHHHHHHCSSEEEEECTTSB---EEEECHHHHHHHCCCHHHHTTCBGGGTBTTGGGSC-----HHHHHHHSEEEEEEEEE
T ss_pred HHHHHhcCCceEEEECCCCc---EEEEHHHHHHHHCCCHHHHhCCChhhcccccCHHH-----HHHHHhcCcEEEEEEEE
Confidence 78999999999999999766 99999999999999999999999877765433222 23344556788899999
Q ss_pred ecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCC
Q 001869 554 TKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (1002)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DIT 587 (1002)
+++|+.+|+.++..++.+.. ..+++++++|||
T Consensus 87 ~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~DIT 118 (118)
T 3olo_A 87 SQSGRIFLVEMSLTFLEDQE--RRFSCVFVREKS 118 (118)
T ss_dssp CTTCCEEEEEEEEEEEEETT--EEEEEEEEEEC-
T ss_pred ccCCCEEEEEEEEEEEEECC--ccEEEEEEEeCC
Confidence 99999999999999997643 346789999997
No 332
>3mjq_A Uncharacterized protein; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium; 2.60A {Desulfitobacterium hafniense}
Probab=99.39 E-value=5.4e-13 Score=124.77 Aligned_cols=117 Identities=12% Similarity=0.118 Sum_probs=90.8
Q ss_pred HHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEEe
Q 001869 475 ATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYT 554 (1002)
Q Consensus 475 ~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~~ 554 (1002)
+.++++++++|+++|.+|. |+++|+++++++||+.++++|+++..+.++++.......+...+..+.. ..++++.+
T Consensus 2 ~~l~~~~~~~i~~~d~~g~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 77 (126)
T 3mjq_A 2 KNFLETIEDMILIINREGR---LLYANTAVPKKLGYTHEELMSMHILTITSAGKMAEGEKILAELFAGKKE-SLPLSLEK 77 (126)
T ss_dssp CTTGGGCSSEEEEEETTSB---EEEECTHHHHHHSCCHHHHHHSBHHHHHCTTCHHHHHHHHHHHHHTCCS-EEEEEEEC
T ss_pred hhHHhhCCceEEEEeCCCc---EEEEcHHHHHHHCCCHHHHcCCCHHHHcCchhHHHHHHHHHHHHhCCCc-eeEEEEEc
Confidence 4578899999999999766 9999999999999999999999988888877766666666666666555 77888899
Q ss_pred cCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCccccccccCC
Q 001869 555 KSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSI 597 (1002)
Q Consensus 555 kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e~~~~ 597 (1002)
++|..+|+.++..++.+ +...+++++++|||++|++++...
T Consensus 78 ~~g~~~~~~~~~~~~~~--~~~~~~~~~~~DITe~k~a~~~~~ 118 (126)
T 3mjq_A 78 KEGTSIPAKARIWQGKW--HNEPCLFAIIKDLSKEERASSPPF 118 (126)
T ss_dssp TTSCEEEEEEEEEEEES--SSSEEEEEEEEECC----------
T ss_pred cCCCEEEEEEEEEeeeE--CCceEEEEEEEechHHHHhhcccc
Confidence 99999999999987765 335678999999999999765443
No 333
>2l0w_A Potassium voltage-gated channel, subfamily H (EAG member 2, isoform CRA_B; HERG, PAS domain, voltage-gated potassium channel, membrane; NMR {Homo sapiens} PDB: 2l1m_A 2l4r_A
Probab=99.35 E-value=7.2e-12 Score=117.95 Aligned_cols=113 Identities=29% Similarity=0.526 Sum_probs=100.1
Q ss_pred HHHHHHhccccEEEEcC---CCCCCCEEecCHHHHHHcCCChhhhcCCC--CccccCCCCCHHHHHHHHHHHhcCCcEEE
Q 001869 474 LATTLERIEKNFVITDP---RLPDNPIIFASDSFLELTEYSREEILGRN--CRFLQGPETDPATVRKIRAAIDNQTDVTV 548 (1002)
Q Consensus 474 l~~i~e~~~~~I~i~D~---~G~d~~I~~vN~a~~~l~Gys~eEliGk~--~~~l~~~~~~~~~~~~l~~~l~~~~~~~~ 548 (1002)
+...+++++++|+++|. +|. |+++|+++++++||+.++++|++ ...+.+++........+...+..+..+..
T Consensus 21 ~~~~~~~~~~~i~~~d~~~~~g~---i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (138)
T 2l0w_A 21 IIRKFEGQSRKFIIANARVENCA---VIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPRTQRRAAAQIAQALLGAEERKV 97 (138)
T ss_dssp HHHHHTTTTSEEEEEESSSTTCB---EEEECSHHHHHHSCCHHHHTTSBTTCGGGCCTTCCHHHHHHHHHHTTCSSCEEE
T ss_pred HHHHHhcCCCCEEEEecCCCCCE---EEEeCHHHHHHhCCCHHHHcCCCCcccccCCcccchhHHHHHHHHHhhcCCcee
Confidence 45556669999999999 777 99999999999999999999998 56677777776667777888888888889
Q ss_pred EEEEEecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCcc
Q 001869 549 QLINYTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEH 589 (1002)
Q Consensus 549 e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITer 589 (1002)
+....+++|..+|+.++..|+.+.+|.+.+++++++|||++
T Consensus 98 ~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~ 138 (138)
T 2l0w_A 98 EIAFYRKDGSCFLCLVDVVPVKNEDGAVIMFILNFEVVMEK 138 (138)
T ss_dssp EEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEC
T ss_pred EEEEECCCCCEEEEEEEEEEEeCCCCCEEEEEEEEEeccCC
Confidence 99999999999999999999999999999999999999985
No 334
>4eho_A Bacteriophytochrome, PAS/PAC sensor; photoreceptor, bacteriopbhytochrome; HET: MSE BLA; 2.90A {Rhodopseudomonas palustris tie-1}
Probab=99.35 E-value=4.2e-13 Score=163.14 Aligned_cols=118 Identities=12% Similarity=0.084 Sum_probs=107.3
Q ss_pred ccHHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEE
Q 001869 472 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLI 551 (1002)
Q Consensus 472 ~~l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~ 551 (1002)
..+..++++++++|+++|.+|+ |++||++|++++||+.+|++|++.....++++... ...+.+.+..++.+++|++
T Consensus 518 ~~~~~lle~a~~~i~~~D~~gr---I~~~N~a~~~l~G~s~~e~~g~~~l~~~~~~~~~~-~~~i~~~l~~g~~~~~E~~ 593 (635)
T 4eho_A 518 PQASSQVHASMQPVLITDAEGR---ILLMNDSFRDMLPAGSPSAVHLDDLAGFFVESNDF-LRNVAELIDHGRGWRGEVL 593 (635)
T ss_dssp SSHHHHHHHCSSCCEEEETTCC---EEEECHHHHTTSCSSCCCCCSSGGGTTSSSSCTHH-HHHHHHHHHHCCCBCCCCE
T ss_pred HHHHHHHHhCCCcEEEECCCCe---EeeHHHHHHHHHCcChHHHcCcchhhccCCCCHHH-HHHHHHHHHcCCcEEEEEE
Confidence 5688999999999999999777 99999999999999999999999777777776654 5667788888889999999
Q ss_pred EEecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCcccccc
Q 001869 552 NYTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (1002)
Q Consensus 552 ~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e 593 (1002)
++++||+.+|+.++..|++|.+|++++++++++|||+||++|
T Consensus 594 ~~~~dG~~~~~~~~~~pv~d~~G~v~g~v~i~~DITerK~aE 635 (635)
T 4eho_A 594 LRGAGNRPLPLAVRADPVTRTEDQSLGFVLIFSDATDRRTAD 635 (635)
T ss_dssp ECCSSSSCEECCCCEEEECSTTSSCCEEEECCCCCSSSCCCC
T ss_pred EEccCCcEEEEEEEEEEEECCCCCEEEEEEEEEeCchHhhCC
Confidence 999999999999999999999999999999999999999864
No 335
>1v9y_A Heme PAS sensor protein; signaling protein; HET: HEM; 1.32A {Escherichia coli} SCOP: d.110.3.2 PDB: 1v9z_A* 1vb6_A* 1s67_L* 1s66_L*
Probab=99.35 E-value=2.7e-12 Score=126.45 Aligned_cols=137 Identities=22% Similarity=0.301 Sum_probs=87.3
Q ss_pred CCCchhhHHHHHHHhhc-ccHHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHH
Q 001869 455 RPDSVDDKVRQKEMRKG-IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATV 533 (1002)
Q Consensus 455 ~~~~~~~~~~~~~l~~~-~~l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~ 533 (1002)
..++.+.+...++++.. ..|+.++++++++|+++|.+|. |+++|+++++++||+.++++|+++..+.+++......
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~d~~g~---i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~ 98 (167)
T 1v9y_A 22 RQDAEVIMKLTDADNAADGIFFPALEQNMMGAVLINENDE---VMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHP 98 (167)
T ss_dssp ------------------CCHHHHHHTCSSEEEEECTTSB---EEEECHHHHHHHSCCGGGTTTSBGGGGSCGGGTTTHH
T ss_pred HhhHHHHHHHHHHHhhhhHHHHHHHHhCCCCEEEECCCCc---EEEECHHHHHHhCCCHHHHcCCChhhccCccccchHH
Confidence 33444444444444433 5699999999999999999766 9999999999999999999999988887776555554
Q ss_pred HHHHHHHhcCCc----EEEEEEEEecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCccccccccC
Q 001869 534 RKIRAAIDNQTD----VTVQLINYTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNS 596 (1002)
Q Consensus 534 ~~l~~~l~~~~~----~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e~~~ 596 (1002)
..+......+.. +..+....+++|..+|+.++..|+ +.+|.+ +++++++|||++++.++++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~g~~-~~~~~~~DiT~~~~~e~~l 163 (167)
T 1v9y_A 99 EYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKV-YYLALVRDASVEMAQKEQT 163 (167)
T ss_dssp HHHHHHHC----------CEEEEECTTSCEEEEEEEEEEE-EETTEE-EEEEEEEC-----------
T ss_pred HHHHHHhhcCCCcccccceEEEEEcCCCcEEEEEEEEEEE-ecCCCE-EEEEEEecCcHHHHHHHHH
Confidence 555555544433 456788889999999999999999 456665 4999999999999876543
No 336
>3mfx_A Sensory BOX/ggdef family protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Shewanella oneidensis}
Probab=99.34 E-value=3.1e-12 Score=122.61 Aligned_cols=112 Identities=11% Similarity=0.065 Sum_probs=85.3
Q ss_pred HHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcC-------
Q 001869 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNG------- 260 (1002)
Q Consensus 188 ~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g------- 260 (1002)
.+.+++++++++++|+++|. +|+|+++|++|++++||+.+|++|+++..++++.........+......+
T Consensus 6 ~~~l~~i~~~~~d~i~~~D~---~g~I~~~N~aa~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (129)
T 3mfx_A 6 LETIELFIQHLTEAMILVNA---NGFIRSCNQRSAELLDCPQVSLKGQDWRNFLTEHHQARYDNLLSHDVQLGTNCGQPV 82 (129)
T ss_dssp HHHHHHHHTTCSSEEEEEET---TSBEEEECHHHHHHTTSCHHHHTTSBGGGGBCTTCCGGGGCTTC----------CCS
T ss_pred HHHHHHHHhcCCceEEEECC---CCEEEeEhHHHHHHHCcCHHHHcCCcHHHHcChHhHHHHHHHHHHHHhcCccccccc
Confidence 46789999999999999998 88899999999999999999999999988877766543222222222222
Q ss_pred CcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccch
Q 001869 261 QSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSK 305 (1002)
Q Consensus 261 ~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITe 305 (1002)
..+..+++.+++||+.+|++++++|+.+ |+. .|+++++|+..
T Consensus 83 ~~~~~E~~~~rkdG~~~~velsis~i~~--~~~-~~v~~~~~~~~ 124 (129)
T 3mfx_A 83 QHPAQETTLICASGKAKDVELSISYIPG--HEP-MFVMVMHDLEH 124 (129)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEEEECS--SSC-EEEEEEEEC--
T ss_pred CCCceEEEEEcCCCCEEEEEEEEEEecC--CCc-EEEEEEechhh
Confidence 1245788999999999999999999973 333 37888899754
No 337
>3d72_A Vivid PAS protein VVD; circadian, photoreceptor, blue-light, LOV, signaling protein; HET: FAD; 1.65A {Neurospora crassa} PDB: 3is2_A* 2pd8_A* 3hjk_A* 2pdr_A* 2pd7_A* 2pdt_A* 3hji_A* 3rh8_B*
Probab=99.34 E-value=4.4e-12 Score=123.17 Aligned_cols=108 Identities=39% Similarity=0.782 Sum_probs=95.4
Q ss_pred HHHHHHhccccEEEEc---CCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCC-----------CHHHHHHHHHH
Q 001869 474 LATTLERIEKNFVITD---PRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPET-----------DPATVRKIRAA 539 (1002)
Q Consensus 474 l~~i~e~~~~~I~i~D---~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~-----------~~~~~~~l~~~ 539 (1002)
+..+++++ ++|+++| .+|+ |+++|+++++++||+.+|++|+++..+.+++. .......+...
T Consensus 28 ~~~~~~~~-~~i~~~d~~d~~g~---i~~~N~a~~~l~G~~~~el~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (149)
T 3d72_A 28 ELGPVDTS-VALILCDLKQKDTP---IVYASEAFLYMTGYSNAEVLGRNCRFLQSPDGMVKPKSTRKYVDSNTINTMRKA 103 (149)
T ss_dssp CCCSCCTT-SCEEEEETTSTTCC---EEEECHHHHHHHCCCHHHHTTSCGGGGGSTTSCCCTTCCCSSSCHHHHHHHHHH
T ss_pred HHHhhcCC-ccEEEEeccCCCCc---EEEECHHHHHHHCcCHHHHcCCChhHhCCccccccccccccccChHHHHHHHHH
Confidence 34566664 9999999 6666 99999999999999999999999888887764 66677778888
Q ss_pred HhcCCcEEEEEEEEecCCCEEEEEEEEEeeeCCCCCEEEEEEEEec
Q 001869 540 IDNQTDVTVQLINYTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLD 585 (1002)
Q Consensus 540 l~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~D 585 (1002)
+..+..+..+++.+++||+.+|+.+++.|+++.+|++.+++++++|
T Consensus 104 ~~~~~~~~~e~~~~~~dG~~~~~~~~~~~i~~~~g~~~~~v~~~~D 149 (149)
T 3d72_A 104 IDRNAEVQVEVVNFKKNGQRFVNFLTMIPVRDETGEYRYSMGFQCE 149 (149)
T ss_dssp HHHTCCEEEEEEEECTTCCEEEEEEEEEEEECTTSSEEEEEEECCC
T ss_pred HHCCCceEEEEEEECCCCCEEEEEEEEEEEEcCCCCEEEEEEEEeC
Confidence 8888899999999999999999999999999999999999999887
No 338
>3mfx_A Sensory BOX/ggdef family protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Shewanella oneidensis}
Probab=99.31 E-value=5.3e-12 Score=120.92 Aligned_cols=109 Identities=10% Similarity=0.069 Sum_probs=84.1
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcC-------CcE
Q 001869 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQ-------TDV 546 (1002)
Q Consensus 474 l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~-------~~~ 546 (1002)
|+.++++++++|+++|.+|+ |+++|+++++++||++++++|+++..+.+++........+......+ ...
T Consensus 9 l~~i~~~~~d~i~~~D~~g~---I~~~N~aa~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (129)
T 3mfx_A 9 IELFIQHLTEAMILVNANGF---IRSCNQRSAELLDCPQVSLKGQDWRNFLTEHHQARYDNLLSHDVQLGTNCGQPVQHP 85 (129)
T ss_dssp HHHHHTTCSSEEEEEETTSB---EEEECHHHHHHTTSCHHHHTTSBGGGGBCTTCCGGGGCTTC----------CCSCEE
T ss_pred HHHHHhcCCceEEEECCCCE---EEeEhHHHHHHHCcCHHHHcCCcHHHHcChHhHHHHHHHHHHHHhcCcccccccCCC
Confidence 89999999999999999777 99999999999999999999999888888776553222222211111 134
Q ss_pred EEEEEEEecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCc
Q 001869 547 TVQLINYTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSE 588 (1002)
Q Consensus 547 ~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITe 588 (1002)
..|+..+++||+.+|++++++|+.+ ++. .++++++|...
T Consensus 86 ~~E~~~~rkdG~~~~velsis~i~~--~~~-~~v~~~~~~~~ 124 (129)
T 3mfx_A 86 AQETTLICASGKAKDVELSISYIPG--HEP-MFVMVMHDLEH 124 (129)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEECS--SSC-EEEEEEEEC--
T ss_pred ceEEEEEcCCCCEEEEEEEEEEecC--CCc-EEEEEEechhh
Confidence 6789999999999999999999983 232 47899999754
No 339
>3vol_A Aerotaxis transducer AER2; heme, oxygen sensor protein, PAS, HAMP, cyanoMet, CN-bound, protein; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=99.30 E-value=1.1e-11 Score=131.52 Aligned_cols=118 Identities=15% Similarity=0.216 Sum_probs=94.1
Q ss_pred ccchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHc------------CCChhHHcCCCCCcCCCCCCChHHHH
Q 001869 184 LPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMT------------GYTSKEVVGRNCRFLQGAGTDPEDVA 251 (1002)
Q Consensus 184 L~~~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~------------Gys~eEliG~~~~~l~~~~~~~~~~~ 251 (1002)
+......++.++++++++|+++|. +|+|+|+|++|++++ ||++++++|+++..+++. .....
T Consensus 17 ~~~e~~~l~~iLd~~~~~vii~D~---~g~I~~~N~a~~~ll~~~~~~~~~~l~G~~~~eliG~~~~~~~~~---~~~~~ 90 (233)
T 3vol_A 17 RGSHMARIKSALDNVSANVMIADN---DLNIIYMNRTVSEMLGRAEADIRKQLPNFDAGRLMGANIDVFHKN---PAHQR 90 (233)
T ss_dssp -CTHHHHHHHHHTTSSSEEEEEET---TSBEEEECHHHHHHHHHTHHHHHTTCTTCCTTSCTTCBGGGGSSS---HHHHH
T ss_pred hHHHHHHHHHHHhcCCCcEEEECC---CCcEEEecHHHHHHHHHHHHHHHhhcCCCCHHHHcCCCHHHHcCC---HHHHH
Confidence 344557789999999999999999 888999999999998 899999999998877643 33333
Q ss_pred HHHHHHHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhh
Q 001869 252 KIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (1002)
Q Consensus 252 ~i~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~l~ 314 (1002)
.++..+. ..+..++. .+|. |+.++++|++|++|++.|++++++|||+++++|++++
T Consensus 91 ~~~~~~~--~~~~~~~~---~~g~--~~~~~~~Pi~d~~G~~~g~v~~~~DITe~~~~e~ei~ 146 (233)
T 3vol_A 91 HLLANLT--GVHKAELN---LGGR--RFSLDVVPVFNDANERLGSAVQWTDRTEEHRAEQEVS 146 (233)
T ss_dssp HHHHTCC--SCEEEEEE---ETTE--EEEEEEEEEECTTCCEEEEEEEEEECHHHHHHHHHHH
T ss_pred HHHHhcc--cceeEEEE---ECCE--EEEEEEEEEECCCCCEEEEEEEEehhhHHHHHHHHHH
Confidence 3433332 23444443 4564 7799999999999999999999999999999998876
No 340
>4eho_A Bacteriophytochrome, PAS/PAC sensor; photoreceptor, bacteriopbhytochrome; HET: MSE BLA; 2.90A {Rhodopseudomonas palustris tie-1}
Probab=99.28 E-value=3.4e-13 Score=163.91 Aligned_cols=118 Identities=14% Similarity=0.169 Sum_probs=105.8
Q ss_pred HHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEEEEE
Q 001869 189 DIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLL 268 (1002)
Q Consensus 189 ~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~ 268 (1002)
+.+..++++++++|+++|. +|+|+|||++|++++||+.+|++|++...+.+++... ....+...+..++.+.+|++
T Consensus 518 ~~~~~lle~a~~~i~~~D~---~grI~~~N~a~~~l~G~s~~e~~g~~~l~~~~~~~~~-~~~~i~~~l~~g~~~~~E~~ 593 (635)
T 4eho_A 518 PQASSQVHASMQPVLITDA---EGRILLMNDSFRDMLPAGSPSAVHLDDLAGFFVESND-FLRNVAELIDHGRGWRGEVL 593 (635)
T ss_dssp SSHHHHHHHCSSCCEEEET---TCCEEEECHHHHTTSCSSCCCCCSSGGGTTSSSSCTH-HHHHHHHHHHHCCCBCCCCE
T ss_pred HHHHHHHHhCCCcEEEECC---CCeEeeHHHHHHHHHCcChHHHcCcchhhccCCCCHH-HHHHHHHHHHcCCcEEEEEE
Confidence 3567789999999999999 8889999999999999999999999877666666554 45667788888888999999
Q ss_pred EEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHH
Q 001869 269 NYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGA 310 (1002)
Q Consensus 269 ~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e 310 (1002)
.+++||+.+|+.+++.|++|.+|+++|++++++|||+||++|
T Consensus 594 ~~~~dG~~~~~~~~~~pv~d~~G~v~g~v~i~~DITerK~aE 635 (635)
T 4eho_A 594 LRGAGNRPLPLAVRADPVTRTEDQSLGFVLIFSDATDRRTAD 635 (635)
T ss_dssp ECCSSSSCEECCCCEEEECSTTSSCCEEEECCCCCSSSCCCC
T ss_pred EEccCCcEEEEEEEEEEEECCCCCEEEEEEEEEeCchHhhCC
Confidence 999999999999999999999999999999999999999875
No 341
>2qkp_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.75A {Streptococcus mutans}
Probab=99.23 E-value=2.2e-11 Score=119.94 Aligned_cols=120 Identities=17% Similarity=0.158 Sum_probs=96.1
Q ss_pred HHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchH---HHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEE
Q 001869 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAG---FFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYC 264 (1002)
Q Consensus 188 ~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a---~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~ 264 (1002)
.+.++++|++++++|+++|. +|+|+|+|++ +++++| ..++++|+++..++++. .....+.+...++.+....
T Consensus 18 ~~~l~~IL~~~~~gI~~vD~---~g~I~~~N~a~~~~~~i~g-~~~~~iGr~v~~~~~~~-~~~~v~~i~~~l~~g~~~~ 92 (151)
T 2qkp_A 18 VEQANLILNHLPLEITFVNK---DDIFQYYNDSVPAAEMVFK-RTPSQVGRNVELCHPPK-VLDKVKKVFELLRNGQRDK 92 (151)
T ss_dssp HHHHHHHHHHSSSEEEEEET---TSBEEEECCCSCGGGCSSC-CCGGGTTSBGGGSSCHH-HHHHHHHHHHHHHTTSBSE
T ss_pred HHHHHHHHHhCCCceEEEcC---CCeEEEEeCCCchhhhhcC-CCHHHcCCCHHHhCCHH-HHHHHHHHHHHHHcCCccE
Confidence 46789999999999999999 8889999999 999999 56789999998776532 2233455677788888766
Q ss_pred EEEEEEecC-CcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhh
Q 001869 265 GRLLNYKKD-GTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (1002)
Q Consensus 265 ~e~~~~~kd-G~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~l~ 314 (1002)
.+++....+ | .++.++..|++|++|+++|++.+++|||+.++++++++
T Consensus 93 ~~~~~~~~~~~--~~v~v~~~Pi~d~~G~~~G~vev~~Dit~l~~le~~r~ 141 (151)
T 2qkp_A 93 VNMWFQSERLG--KFVYVTYAAVRDQAGDFQGVLEYVQDIKPFFELDSEFN 141 (151)
T ss_dssp EEEEEEETTTT--EEEEEEEEEEECTTCCEEEEEEEEEECGGGGGGGGC--
T ss_pred EEEEEecCCCC--eEEEEEEEEEECCCCCEEEEEEEEEECHHHHhhhhhhh
Confidence 666653332 4 35788999999999999999999999999998887754
No 342
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.22 E-value=3.6e-11 Score=129.75 Aligned_cols=139 Identities=13% Similarity=0.075 Sum_probs=112.1
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLI 747 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lV 747 (1002)
..|++...++.|+++.||++.. .+..+++|+....... ....+.+|+.+++.+. +..++++++++...+..|+|
T Consensus 14 ~~~~~~~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~~---~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv 88 (263)
T 3tm0_A 14 EKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKG---TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp TTSEEEECCSCCSSSEEEEEEC--SSCEEEEEEECGGGTT---STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred ccceeEeeccCCCCCeEEEEEC--CCCcEEEEeCCcccCC---CHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence 4799999999999999999975 3678999998753211 1235778999999884 67888999999998999999
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH--------------------------------------
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-------------------------------------- 789 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-------------------------------------- 789 (1002)
|||++|.+|.+.+. +......++.+++.+|..||+
T Consensus 89 ~e~i~G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (263)
T 3tm0_A 89 MSEADGVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEED 161 (263)
T ss_dssp EECCSSEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTT
T ss_pred EEecCCeehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccc
Confidence 99999999987632 112234678899999999999
Q ss_pred ---------------------cCcccCCCCCCCEEEccCCcEEEEeccCCc
Q 001869 790 ---------------------QGIIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (1002)
Q Consensus 790 ---------------------~gIiHrDLKP~NILl~~~g~vkL~DFG~a~ 819 (1002)
..++|+|++|.|||++.++.+.|+||+.+.
T Consensus 162 ~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 162 TPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp CSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 458999999999999876566799999874
No 343
>4hi4_A Aerotaxis transducer AER2; PAS domain, diatomic GAS sensor, signaling protein; HET: HEM GOL; 2.30A {Pseudomonas aeruginosa}
Probab=99.22 E-value=7.9e-11 Score=110.80 Aligned_cols=106 Identities=17% Similarity=0.256 Sum_probs=80.7
Q ss_pred HHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcC------------CChhHHcCCCCCcCCCCCCChHHHHHHHH
Q 001869 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTG------------YTSKEVVGRNCRFLQGAGTDPEDVAKIRE 255 (1002)
Q Consensus 188 ~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~G------------ys~eEliG~~~~~l~~~~~~~~~~~~i~~ 255 (1002)
..+++++++++++||+++|. +|+|+|+|++|++++| |+.++++|+++..+++. ......+..
T Consensus 4 ~~rl~~il~~~~~gviv~D~---~g~I~~~N~a~~~llg~~~~~i~~~~~g~~~~~~~G~~~~~~~~~---~~~~~~~~~ 77 (121)
T 4hi4_A 4 MARIASALDNVSANVMIADN---DLNIIYMNRTVSEMLGRAEADIRKQLPNFDAGRLMGANIDVFHKN---PAHQRHLLA 77 (121)
T ss_dssp HHHHHHHHTTSSSEEEEEET---TCBEEEECHHHHHHHHHTHHHHHHHCTTCCGGGCTTCBGGGGCSS---HHHHHHHHH
T ss_pred HHHHHHHHhcCCccEEEEcC---CCeEEEecHHHHHHHHHHHHHHHHhcCCCChHHhcCCCHHHhcCC---HHHHHHHHh
Confidence 46789999999999999999 8889999999999995 89999999998876643 222222322
Q ss_pred HHHcCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchh
Q 001869 256 TLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKH 306 (1002)
Q Consensus 256 ~l~~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITer 306 (1002)
.+. ..+..++. .+|. ++.++++|++|.+|.+.|++++++|||++
T Consensus 78 ~~~--~~~~~~~~---~~~~--~~~~~~~pi~~~~g~~~g~v~~~~DiTee 121 (121)
T 4hi4_A 78 NLT--GVHKAELN---LGGR--RFSLDVVPVFNDANARLGSAVQWTDRTEE 121 (121)
T ss_dssp HCS--SCEEEEEE---ETTE--EEEEEEEEEECTTSCEEEEEEEEEECC--
T ss_pred CcC--CCcEEEEE---ECCE--EEEEEEEEEECCCCCEEEEEEEEEEecCC
Confidence 222 33444433 3554 55789999999999999999999999974
No 344
>3fc7_A HTR-like protein, sensor protein; APC87712.1, HTR-like protein,haloarcula marismortui ATCC 430 structural genomics, PSI-2; 2.65A {Haloarcula marismortui}
Probab=99.21 E-value=9.4e-12 Score=116.35 Aligned_cols=108 Identities=11% Similarity=0.125 Sum_probs=77.1
Q ss_pred hHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEEE
Q 001869 187 VSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGR 266 (1002)
Q Consensus 187 ~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e 266 (1002)
+++.|+.++++++++|+++|. +|+|+++|++|++++||+.++++|+++..+++++...............+...
T Consensus 17 ~~~~~~~i~~~~~~~i~~~d~---~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 90 (125)
T 3fc7_A 17 TRKKFESLVSDSPDGIVHLTT---NGTILSVNPSMAGRLGADPDTLVGQQLSAVMDSEAANQRLEAGKSAVENGTAT--- 90 (125)
T ss_dssp ---------CCSCCEEEEEET---TSBEEEECHHHHHHHTSCHHHHTTSBGGGSSCHHHHHHHHHHHHHHHHHTSCE---
T ss_pred HHHHHHHHHhcCCCeEEEEcC---CCeEEEECHHHHHHhCCCHHHHcCccHHHhCCHHHHHHHHHHHHHHhcCCCeE---
Confidence 678899999999999999998 88899999999999999999999999887764332222223335556666543
Q ss_pred EEEEecCCc-EEEEEEEeeeeecCCCCEEEEEEEEeccc
Q 001869 267 LLNYKKDGT-PFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (1002)
Q Consensus 267 ~~~~~kdG~-~~w~~~~~~pi~d~~G~v~~~v~~~~DIT 304 (1002)
..++|. .+|+.+++.|+.+. |...+++++++|||
T Consensus 91 ---~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~DIT 125 (125)
T 3fc7_A 91 ---RSEDAVGGRHYHNQYIPVDSH-RKSDTFQLVSRDIT 125 (125)
T ss_dssp ---EEEEEETTEEEEEEEEESSTT-TTTTEEEEEEEECC
T ss_pred ---EeEcCCCcEEEEEEEEeEecC-CCeEEEEEEEecCC
Confidence 234455 67999999998765 66678999999998
No 345
>2vlg_A Sporulation kinase A; histidine kinase, two-component regulatory system, two-component signal transduction, transferase, phosphorylation, SCOD; 1.7A {Bacillus subtilis}
Probab=99.18 E-value=2.6e-11 Score=112.79 Aligned_cols=94 Identities=11% Similarity=0.064 Sum_probs=70.1
Q ss_pred HHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEEec
Q 001869 476 TTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTK 555 (1002)
Q Consensus 476 ~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~~k 555 (1002)
.++++++++|+++|.+|. |+|+|+++++++||+++|++|+++..++||++.......+. ..+.....++++++|
T Consensus 3 ~lle~~~d~i~v~d~~G~---i~yvn~~~~~~lGy~~~el~G~~~~~~ihp~D~~~~~~~~~---~~~~~~~~e~r~~~k 76 (111)
T 2vlg_A 3 FPLQTKTDIHAVLASNGR---IIYISANSKLHLGYLQGEMIGSFLKTFLHEEDQFLVESYFY---NEHHLMPCTFRFIKK 76 (111)
T ss_dssp ------CCEEEEECTTSB---EEEECTTHHHHHSCCHHHHTTSBGGGGBCGGGHHHHHHHHH---CSCCSSCEEEEEECT
T ss_pred chhhcCCCEEEEEcCCCe---EEEEChHHHHHhCCCHHHHcCCcHHHeECHhHHHHHHHHHh---ccCCCccEEEEEEcC
Confidence 468889999999999777 99999999999999999999999989999998766544332 233334578889999
Q ss_pred CCCEEEEEEEEEeeeCCCCC
Q 001869 556 SGNKFWNLFHLQPMRDQKGE 575 (1002)
Q Consensus 556 dG~~~wv~~~~~pi~d~~G~ 575 (1002)
||+.+|+++++.++++..++
T Consensus 77 dG~~~wve~~~~~v~~~~~~ 96 (111)
T 2vlg_A 77 DHTIVWVEAAVEIVTTRAER 96 (111)
T ss_dssp TSCEEEEEEEEEEC------
T ss_pred CCCEEEEEEEEEEEecccCC
Confidence 99999999999999987653
No 346
>4f3l_A Mclock, circadian locomoter output cycles protein kaput; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}
Probab=99.16 E-value=3.1e-11 Score=136.78 Aligned_cols=108 Identities=11% Similarity=0.011 Sum_probs=96.7
Q ss_pred CcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCcEEEE
Q 001869 200 QTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWN 279 (1002)
Q Consensus 200 d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~w~ 279 (1002)
..++..|. ||+|+|+|++++.++||+++|++|+++..++||++.......++..+..|.....++++++|||..+|+
T Consensus 252 ~f~~~~~~---dg~~~~vn~~~~~ilGY~~eEl~g~~~~~~iHpdD~~~~~~~~~~~l~~g~~~~~eyR~~~kdG~~vWv 328 (361)
T 4f3l_A 252 EFTSRHSL---EWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWL 328 (361)
T ss_dssp EEEEEECT---TSBEEEECTTSHHHHCCCHHHHTTSBGGGGBCHHHHHHHHHHHHHHHHHSEEECCCEEEECTTSEEEEE
T ss_pred eeEEEEcC---CceEEEECChhhhhhCcCHHHHcCCCHHHeECHHHHHHHHHHHHHHHhCCCcceEEEEEEecCCCEEEE
Confidence 34444555 899999999999999999999999999999999888777788888888888777889999999999999
Q ss_pred EEEeeeeecC-CCCEEEEEEEEeccchhhHHH
Q 001869 280 LLTIAPIKDD-EGKVLKFIGMQVEVSKHTEGA 310 (1002)
Q Consensus 280 ~~~~~pi~d~-~G~v~~~v~~~~DITerk~~e 310 (1002)
+.+..|++|. +|.+.+++++.+|||+++..+
T Consensus 329 ~~~~~~v~~~~~g~~~~iv~~~~dITe~~~~~ 360 (361)
T 4f3l_A 329 QTHYYITYHQWNSRPEFIVCTHTVVSYAEVRA 360 (361)
T ss_dssp EEEEEEEECTTTCCEEEEEEEEEECCHHHHHH
T ss_pred EEEEEEEEcCCCCCeeEEEEEEEECChhHhhc
Confidence 9999999998 799999999999999998765
No 347
>3b33_A Sensor protein; structural genomics, PAS domain, nitrogen regulation protein APC91440.4, PSI-2; HET: MSE; 1.83A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.16 E-value=1.1e-10 Score=107.96 Aligned_cols=107 Identities=21% Similarity=0.254 Sum_probs=84.6
Q ss_pred HHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcE-EEEEE
Q 001869 190 IVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSY-CGRLL 268 (1002)
Q Consensus 190 ~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~-~~e~~ 268 (1002)
+...++++++++|+++|. +|+|+++|+++++++||+.++++|+++..++++... ....+..++..+... ..+..
T Consensus 8 l~~~il~~~~~~i~~~D~---~g~I~~~N~aa~~l~g~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 82 (115)
T 3b33_A 8 LPSAILNNMVTATLILDD---GLAIRYANPAAELLFSQSAKRIVEQSLSQLIQHASL--DLALLTQPLQSGQSITDSDVT 82 (115)
T ss_dssp HHHHHHHHCSSEEEEECT---TCBEEEECHHHHHHTTSCHHHHTTCBHHHHCSEEEC--CTHHHHHHHHHCCCEEEEEEE
T ss_pred cHHHHHhhcCceEEEECC---CCcEEEECHHHHHHhCCCHHHHhCCCHHHHhCccch--hhHHHHHHHHcCCcccCCceE
Confidence 456699999999999999 888999999999999999999999998766543221 123445566666653 35666
Q ss_pred EEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccc
Q 001869 269 NYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (1002)
Q Consensus 269 ~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DIT 304 (1002)
.. ++|..+|+.+++.|+.+ +|. .+++.+++||+
T Consensus 83 ~~-~~g~~~~~~~~~~pi~~-~g~-~~~l~~~~Di~ 115 (115)
T 3b33_A 83 FV-VDGRPLMLEVTVSPITW-QRQ-LMLLVEMRKID 115 (115)
T ss_dssp EE-ETTEEEEEEEEEEEEEE-TTE-EEEEEEEEEC-
T ss_pred Ee-cCCCEEEEEEEEEEeec-CCc-eEEEEEEEeCC
Confidence 55 88999999999999998 776 68899999985
No 348
>2vlg_A Sporulation kinase A; histidine kinase, two-component regulatory system, two-component signal transduction, transferase, phosphorylation, SCOD; 1.7A {Bacillus subtilis}
Probab=99.15 E-value=4.6e-11 Score=111.10 Aligned_cols=95 Identities=17% Similarity=0.103 Sum_probs=68.4
Q ss_pred HHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEec
Q 001869 193 DALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKK 272 (1002)
Q Consensus 193 ~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~k 272 (1002)
.++++++++|+++|. +|+|+|+|+++++++||+++|++|+++..+.||++.......+. ..+.....++++++|
T Consensus 3 ~lle~~~d~i~v~d~---~G~i~yvn~~~~~~lGy~~~el~G~~~~~~ihp~D~~~~~~~~~---~~~~~~~~e~r~~~k 76 (111)
T 2vlg_A 3 FPLQTKTDIHAVLAS---NGRIIYISANSKLHLGYLQGEMIGSFLKTFLHEEDQFLVESYFY---NEHHLMPCTFRFIKK 76 (111)
T ss_dssp ------CCEEEEECT---TSBEEEECTTHHHHHSCCHHHHTTSBGGGGBCGGGHHHHHHHHH---CSCCSSCEEEEEECT
T ss_pred chhhcCCCEEEEEcC---CCeEEEEChHHHHHhCCCHHHHcCCcHHHeECHhHHHHHHHHHh---ccCCCccEEEEEEcC
Confidence 578999999999998 88899999999999999999999999988888877555433321 223334567888999
Q ss_pred CCcEEEEEEEeeeeecCCCCE
Q 001869 273 DGTPFWNLLTIAPIKDDEGKV 293 (1002)
Q Consensus 273 dG~~~w~~~~~~pi~d~~G~v 293 (1002)
||+.+|++++++++.+.++..
T Consensus 77 dG~~~wve~~~~~v~~~~~~~ 97 (111)
T 2vlg_A 77 DHTIVWVEAAVEIVTTRAERT 97 (111)
T ss_dssp TSCEEEEEEEEEEC-------
T ss_pred CCCEEEEEEEEEEEecccCCc
Confidence 999999999999999876543
No 349
>3fc7_A HTR-like protein, sensor protein; APC87712.1, HTR-like protein,haloarcula marismortui ATCC 430 structural genomics, PSI-2; 2.65A {Haloarcula marismortui}
Probab=99.14 E-value=2.4e-11 Score=113.46 Aligned_cols=106 Identities=11% Similarity=0.088 Sum_probs=75.9
Q ss_pred ccHHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEE
Q 001869 472 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLI 551 (1002)
Q Consensus 472 ~~l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~ 551 (1002)
..|+.++++++++|+++|.+|+ |+++|+++++++||+.++++|+++..+.+++...............+...
T Consensus 19 ~~~~~i~~~~~~~i~~~d~~g~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 90 (125)
T 3fc7_A 19 KKFESLVSDSPDGIVHLTTNGT---ILSVNPSMAGRLGADPDTLVGQQLSAVMDSEAANQRLEAGKSAVENGTAT----- 90 (125)
T ss_dssp -------CCSCCEEEEEETTSB---EEEECHHHHHHHTSCHHHHTTSBGGGSSCHHHHHHHHHHHHHHHHHTSCE-----
T ss_pred HHHHHHHhcCCCeEEEEcCCCe---EEEECHHHHHHhCCCHHHHcCccHHHhCCHHHHHHHHHHHHHHhcCCCeE-----
Confidence 4589999999999999999776 99999999999999999999999887773332222222234455555543
Q ss_pred EEecCCC-EEEEEEEEEeeeCCCCCEEEEEEEEecCC
Q 001869 552 NYTKSGN-KFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (1002)
Q Consensus 552 ~~~kdG~-~~wv~~~~~pi~d~~G~v~~~vgi~~DIT 587 (1002)
..++|. .+|+.+++.|+.+. |+..+++++++|||
T Consensus 91 -~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~DIT 125 (125)
T 3fc7_A 91 -RSEDAVGGRHYHNQYIPVDSH-RKSDTFQLVSRDIT 125 (125)
T ss_dssp -EEEEEETTEEEEEEEEESSTT-TTTTEEEEEEEECC
T ss_pred -EeEcCCCcEEEEEEEEeEecC-CCeEEEEEEEecCC
Confidence 234455 67999999998765 66678999999998
No 350
>3fg8_A Uncharacterized protein RHA05790; PAS domain, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; HET: 3PB; 1.80A {Rhodococcus SP}
Probab=99.14 E-value=1.6e-11 Score=114.88 Aligned_cols=108 Identities=18% Similarity=0.139 Sum_probs=86.4
Q ss_pred HHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEEEE
Q 001869 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRL 267 (1002)
Q Consensus 188 ~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~ 267 (1002)
.+..++++++++++|+++|. +|+|+++|+++++++||+.++++|+++..++++.........+..++..+.....++
T Consensus 11 ~~~~~~il~~~~~~i~~~D~---~g~i~~~N~a~~~l~g~~~~e~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (118)
T 3fg8_A 11 SSGRENLYFQGGLGFMALDE---DLRIIYVNSGCLRHVRRSRDELLGRVVTEVLPETQGSYFDALCRKVLATGREQQTRV 87 (118)
T ss_dssp --CCCCSSSCTTCEEEEECT---TCBEEEECHHHHHHHTCCHHHHTTSBHHHHCGGGTTSHHHHHHHHHHHHCCCEEEEE
T ss_pred cchHHHHHhhCCceEEEECC---CCeEEEECHHHHHHhCCCHHHHcCCcHHHHcCccchHHHHHHHHHHHHcCCceEEEE
Confidence 34456678999999999998 888999999999999999999999998877776666666777888898888877643
Q ss_pred EEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchh
Q 001869 268 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKH 306 (1002)
Q Consensus 268 ~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITer 306 (1002)
.....+| .|+.+++.|+.+ +++++++|||+|
T Consensus 88 ~~~~~~g--~~~~~~~~p~~~------g~v~~~~DITer 118 (118)
T 3fg8_A 88 DSLYSPG--MTIEVTAAADSG------ALVVHFRDVTAE 118 (118)
T ss_dssp ECSSSTT--CEEEEEEEEETT------EEEEEEEECSCC
T ss_pred EEEcCCC--eEEEEEEEEcCC------cEEEEEEeccCC
Confidence 3333466 478888889853 378899999985
No 351
>4hi4_A Aerotaxis transducer AER2; PAS domain, diatomic GAS sensor, signaling protein; HET: HEM GOL; 2.30A {Pseudomonas aeruginosa}
Probab=99.13 E-value=2.7e-10 Score=107.13 Aligned_cols=104 Identities=19% Similarity=0.277 Sum_probs=78.7
Q ss_pred cHHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcC------------CChhhhcCCCCccccCCCCCHHHHHHHHHHH
Q 001869 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTE------------YSREEILGRNCRFLQGPETDPATVRKIRAAI 540 (1002)
Q Consensus 473 ~l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~G------------ys~eEliGk~~~~l~~~~~~~~~~~~l~~~l 540 (1002)
+|+.++++++++|+++|.+|+ |+++|++|++++| |++++++|++...+.+. ......+....
T Consensus 6 rl~~il~~~~~gviv~D~~g~---I~~~N~a~~~llg~~~~~i~~~~~g~~~~~~~G~~~~~~~~~---~~~~~~~~~~~ 79 (121)
T 4hi4_A 6 RIASALDNVSANVMIADNDLN---IIYMNRTVSEMLGRAEADIRKQLPNFDAGRLMGANIDVFHKN---PAHQRHLLANL 79 (121)
T ss_dssp HHHHHHTTSSSEEEEEETTCB---EEEECHHHHHHHHHTHHHHHHHCTTCCGGGCTTCBGGGGCSS---HHHHHHHHHHC
T ss_pred HHHHHHhcCCccEEEEcCCCe---EEEecHHHHHHHHHHHHHHHHhcCCCChHHhcCCCHHHhcCC---HHHHHHHHhCc
Confidence 389999999999999999777 9999999999995 89999999997766542 22222222222
Q ss_pred hcCCcEEEEEEEEecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCcc
Q 001869 541 DNQTDVTVQLINYTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEH 589 (1002)
Q Consensus 541 ~~~~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITer 589 (1002)
. ..+..++. .+|. ++.++..|++|.+|++.|++++++|||++
T Consensus 80 ~--~~~~~~~~---~~~~--~~~~~~~pi~~~~g~~~g~v~~~~DiTee 121 (121)
T 4hi4_A 80 T--GVHKAELN---LGGR--RFSLDVVPVFNDANARLGSAVQWTDRTEE 121 (121)
T ss_dssp S--SCEEEEEE---ETTE--EEEEEEEEEECTTSCEEEEEEEEEECC--
T ss_pred C--CCcEEEEE---ECCE--EEEEEEEEEECCCCCEEEEEEEEEEecCC
Confidence 2 33444433 3554 55788999999999999999999999984
No 352
>3vol_A Aerotaxis transducer AER2; heme, oxygen sensor protein, PAS, HAMP, cyanoMet, CN-bound, protein; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=99.13 E-value=1.7e-10 Score=122.33 Aligned_cols=107 Identities=19% Similarity=0.265 Sum_probs=85.4
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHc------------CCChhhhcCCCCccccCCCCCHHHHHHHHHHHh
Q 001869 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELT------------EYSREEILGRNCRFLQGPETDPATVRKIRAAID 541 (1002)
Q Consensus 474 l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~------------Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~ 541 (1002)
++.++++++++|+++|.+|+ |+|+|++|++++ ||++++++|+++..+.+. ......++..+.
T Consensus 24 l~~iLd~~~~~vii~D~~g~---I~~~N~a~~~ll~~~~~~~~~~l~G~~~~eliG~~~~~~~~~---~~~~~~~~~~~~ 97 (233)
T 3vol_A 24 IKSALDNVSANVMIADNDLN---IIYMNRTVSEMLGRAEADIRKQLPNFDAGRLMGANIDVFHKN---PAHQRHLLANLT 97 (233)
T ss_dssp HHHHHTTSSSEEEEEETTSB---EEEECHHHHHHHHHTHHHHHTTCTTCCTTSCTTCBGGGGSSS---HHHHHHHHHTCC
T ss_pred HHHHHhcCCCcEEEECCCCc---EEEecHHHHHHHHHHHHHHHhhcCCCCHHHHcCCCHHHHcCC---HHHHHHHHHhcc
Confidence 78899999999999999777 999999999998 899999999998777642 333333333322
Q ss_pred cCCcEEEEEEEEecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCcccccc
Q 001869 542 NQTDVTVQLINYTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 593 (1002)
Q Consensus 542 ~~~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e 593 (1002)
..+..++. .+|. |+.+++.|++|++|++.+++++++|||++++.+
T Consensus 98 --~~~~~~~~---~~g~--~~~~~~~Pi~d~~G~~~g~v~~~~DITe~~~~e 142 (233)
T 3vol_A 98 --GVHKAELN---LGGR--RFSLDVVPVFNDANERLGSAVQWTDRTEEHRAE 142 (233)
T ss_dssp --SCEEEEEE---ETTE--EEEEEEEEEECTTCCEEEEEEEEEECHHHHHHH
T ss_pred --cceeEEEE---ECCE--EEEEEEEEEECCCCCEEEEEEEEehhhHHHHHH
Confidence 23444443 4564 778999999999999999999999999999853
No 353
>3fg8_A Uncharacterized protein RHA05790; PAS domain, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; HET: 3PB; 1.80A {Rhodococcus SP}
Probab=99.11 E-value=6.6e-11 Score=110.72 Aligned_cols=105 Identities=14% Similarity=0.093 Sum_probs=86.1
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001869 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (1002)
Q Consensus 474 l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~ 553 (1002)
++.++++++++|+++|.+|+ |+++|+++++++||+.++++|+++..+.++.........+..++..+.....++...
T Consensus 14 ~~~il~~~~~~i~~~D~~g~---i~~~N~a~~~l~g~~~~e~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (118)
T 3fg8_A 14 RENLYFQGGLGFMALDEDLR---IIYVNSGCLRHVRRSRDELLGRVVTEVLPETQGSYFDALCRKVLATGREQQTRVDSL 90 (118)
T ss_dssp CCCSSSCTTCEEEEECTTCB---EEEECHHHHHHHTCCHHHHTTSBHHHHCGGGTTSHHHHHHHHHHHHCCCEEEEEECS
T ss_pred HHHHHhhCCceEEEECCCCe---EEEECHHHHHHhCCCHHHHcCCcHHHHcCccchHHHHHHHHHHHHcCCceEEEEEEE
Confidence 67789999999999999666 999999999999999999999998877776665566677888888888877754443
Q ss_pred ecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCcc
Q 001869 554 TKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEH 589 (1002)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITer 589 (1002)
..+| .|+.++..|+.+ | ++++++|||+|
T Consensus 91 ~~~g--~~~~~~~~p~~~--g----~v~~~~DITer 118 (118)
T 3fg8_A 91 YSPG--MTIEVTAAADSG--A----LVVHFRDVTAE 118 (118)
T ss_dssp SSTT--CEEEEEEEEETT--E----EEEEEEECSCC
T ss_pred cCCC--eEEEEEEEEcCC--c----EEEEEEeccCC
Confidence 3466 478888888853 2 78899999986
No 354
>3b33_A Sensor protein; structural genomics, PAS domain, nitrogen regulation protein APC91440.4, PSI-2; HET: MSE; 1.83A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.09 E-value=3.3e-10 Score=104.53 Aligned_cols=106 Identities=11% Similarity=0.076 Sum_probs=83.7
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCc-EEEEEEE
Q 001869 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD-VTVQLIN 552 (1002)
Q Consensus 474 l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~-~~~e~~~ 552 (1002)
...++++++++|+++|.+|+ |+++|+++++++||+.++++|+++..+.++... ....+...+..+.. ...+..+
T Consensus 9 ~~~il~~~~~~i~~~D~~g~---I~~~N~aa~~l~g~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 83 (115)
T 3b33_A 9 PSAILNNMVTATLILDDGLA---IRYANPAAELLFSQSAKRIVEQSLSQLIQHASL--DLALLTQPLQSGQSITDSDVTF 83 (115)
T ss_dssp HHHHHHHCSSEEEEECTTCB---EEEECHHHHHHTTSCHHHHTTCBHHHHCSEEEC--CTHHHHHHHHHCCCEEEEEEEE
T ss_pred HHHHHhhcCceEEEECCCCc---EEEECHHHHHHhCCCHHHHhCCCHHHHhCccch--hhHHHHHHHHcCCcccCCceEE
Confidence 56799999999999999777 999999999999999999999997666544321 12334555656655 3456665
Q ss_pred EecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCC
Q 001869 553 YTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (1002)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DIT 587 (1002)
. ++|..+|+.+++.|+.+ +|. .+++.+++||+
T Consensus 84 ~-~~g~~~~~~~~~~pi~~-~g~-~~~l~~~~Di~ 115 (115)
T 3b33_A 84 V-VDGRPLMLEVTVSPITW-QRQ-LMLLVEMRKID 115 (115)
T ss_dssp E-ETTEEEEEEEEEEEEEE-TTE-EEEEEEEEEC-
T ss_pred e-cCCCEEEEEEEEEEeec-CCc-eEEEEEEEeCC
Confidence 5 89999999999999998 776 68899999985
No 355
>2qkp_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.75A {Streptococcus mutans}
Probab=99.07 E-value=2.7e-10 Score=112.05 Aligned_cols=116 Identities=16% Similarity=0.139 Sum_probs=91.8
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEecCHH---HHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEE
Q 001869 474 LATTLERIEKNFVITDPRLPDNPIIFASDS---FLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQL 550 (1002)
Q Consensus 474 l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a---~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~ 550 (1002)
|..++++++++|+++|.+|+ |+|+|++ +++++| ..++++|+++..+.++. .....+.+...+..+.....++
T Consensus 21 l~~IL~~~~~gI~~vD~~g~---I~~~N~a~~~~~~i~g-~~~~~iGr~v~~~~~~~-~~~~v~~i~~~l~~g~~~~~~~ 95 (151)
T 2qkp_A 21 ANLILNHLPLEITFVNKDDI---FQYYNDSVPAAEMVFK-RTPSQVGRNVELCHPPK-VLDKVKKVFELLRNGQRDKVNM 95 (151)
T ss_dssp HHHHHHHSSSEEEEEETTSB---EEEECCCSCGGGCSSC-CCGGGTTSBGGGSSCHH-HHHHHHHHHHHHHTTSBSEEEE
T ss_pred HHHHHHhCCCceEEEcCCCe---EEEEeCCCchhhhhcC-CCHHHcCCCHHHhCCHH-HHHHHHHHHHHHHcCCccEEEE
Confidence 88999999999999999777 9999999 999999 56789999987765432 2233455667777787766666
Q ss_pred EEEecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCcccccccc
Q 001869 551 INYTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRN 595 (1002)
Q Consensus 551 ~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e~~ 595 (1002)
+....+ ...++.++..|++|++|+++|++.+++|||+.++.++.
T Consensus 96 ~~~~~~-~~~~v~v~~~Pi~d~~G~~~G~vev~~Dit~l~~le~~ 139 (151)
T 2qkp_A 96 WFQSER-LGKFVYVTYAAVRDQAGDFQGVLEYVQDIKPFFELDSE 139 (151)
T ss_dssp EEEETT-TTEEEEEEEEEEECTTCCEEEEEEEEEECGGGGGGGGC
T ss_pred EEecCC-CCeEEEEEEEEEECCCCCEEEEEEEEEECHHHHhhhhh
Confidence 553332 12467888999999999999999999999999876554
No 356
>4f3l_B BMAL1B; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}
Probab=99.07 E-value=1.8e-10 Score=131.66 Aligned_cols=108 Identities=12% Similarity=0.025 Sum_probs=90.7
Q ss_pred cCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCc-EEEEEEEEecCCcE
Q 001869 198 FQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS-YCGRLLNYKKDGTP 276 (1002)
Q Consensus 198 ~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~-~~~e~~~~~kdG~~ 276 (1002)
..+.++..|. ||+|+|+|++++.++||+++|++|+++..++||++.......+...+..+.. ...++++++|||..
T Consensus 277 ~~~fi~~~~~---dg~~~~vn~~~~~ilGY~~eEl~g~~~~~~iHpdD~~~~~~~~~~~l~~~~~~~~~eyR~~~kdG~~ 353 (387)
T 4f3l_B 277 SMEYVSRHAI---DGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSF 353 (387)
T ss_dssp CCEEEEEECT---TSBEEEECTHHHHHHCCCHHHHTTSBGGGTBCHHHHHHHHHHHHHHTTCSSCEECCCEEEECTTSCE
T ss_pred CceEEEEECC---CCEEEEECCCcccccCCCHHHHcCCcHHHeeCHHHHHHHHHHHHHHHhcCCCeeeEEEEEEccCCCE
Confidence 4455666666 8999999999999999999999999999899998877777777777766554 56799999999999
Q ss_pred EEEEEEeeeeecC-CCCEEEEEEEEeccchhhH
Q 001869 277 FWNLLTIAPIKDD-EGKVLKFIGMQVEVSKHTE 308 (1002)
Q Consensus 277 ~w~~~~~~pi~d~-~G~v~~~v~~~~DITerk~ 308 (1002)
+|++.+..+++|. .|.+.+++|+.+|||+||.
T Consensus 354 vWv~~~~~~~~~~~~g~~~~ivg~~~dIT~Rk~ 386 (387)
T 4f3l_B 354 ITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVL 386 (387)
T ss_dssp EEEEEEEEEEEETTTTEEEEEEEEEEECC----
T ss_pred EEEEEEEEEEECCCCCCEEEEEEEEEEcchhhc
Confidence 9999999999987 7899999999999999974
No 357
>1ll8_A PAS kinase; PAS domain, ligand binding, ligand screening, kinase regulation, transferase; NMR {Homo sapiens} SCOP: d.110.3.5
Probab=99.03 E-value=7.7e-11 Score=109.06 Aligned_cols=102 Identities=15% Similarity=0.233 Sum_probs=75.8
Q ss_pred hcCCcEEEEeCCCCC-CcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHH-HHHc-CCc---EEEEEEEE
Q 001869 197 TFQQTFVVSDATKPD-YPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRE-TLQN-GQS---YCGRLLNY 270 (1002)
Q Consensus 197 ~~~d~i~v~D~~~~d-G~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~-~l~~-g~~---~~~e~~~~ 270 (1002)
+.+++|+++|. + |+|+++|++|++++||+.+|++|+++..++++..... ...+.. .+.. +.. ...++..+
T Consensus 6 ~~~~~i~~~d~---~~g~I~~~N~aa~~l~G~~~~el~g~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (114)
T 1ll8_A 6 EFNKAIFTVDA---KTTEILVANDKACGLLGYSSQDLIGQKLTQFFLRSDSDV-VEALSEEHMEADGHAAVVFGTVVDII 81 (114)
T ss_dssp TTTCEEEEEET---TTCBEEEECTTHHHHHTCCTTTTTTSBGGGGSSCTTTHH-HHHTTSSTTSSSSCSSCCCSSSEEEC
T ss_pred CCCceEEEEEC---CCCeEEEehHHHHHHhCCCHHHHcCCCHHHhcCcchhHH-HHHHHHHhhccCCcceeccCcEEEEE
Confidence 34579999998 7 8899999999999999999999999988877754432 222221 1111 111 12346678
Q ss_pred ecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccc
Q 001869 271 KKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (1002)
Q Consensus 271 ~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DIT 304 (1002)
++||+.+|++++++|+.+.++ .+++++++|++
T Consensus 82 ~~dG~~~~v~~~~~~~~~~~~--~~~v~~~~~~~ 113 (114)
T 1ll8_A 82 SRSGEKIPVSVWMKRMRQERR--LCCVVVLEPVE 113 (114)
T ss_dssp CTTCCCEEEECCEECCBSSSS--BEEEEEEEECC
T ss_pred ecCCCEEEEEEEEEeeccCCc--cEEEEEEeecC
Confidence 999999999999999987554 36788999986
No 358
>3a0r_A Sensor protein; four helix bundle, PAS fold, kinase, phosphoprotein, transfe two-component regulatory system; 3.80A {Thermotoga maritima}
Probab=99.02 E-value=2.3e-10 Score=128.46 Aligned_cols=139 Identities=14% Similarity=0.114 Sum_probs=103.2
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001869 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (1002)
Q Consensus 474 l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~ 553 (1002)
++.++++++++|+++|.+|+ |+++|++|++++||++++++|+++..+.++ ......+...+..+.....+.
T Consensus 10 ~~~i~~~~~~~i~~~d~~g~---i~~~N~a~~~l~G~~~~e~~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~--- 80 (349)
T 3a0r_A 10 SESILESLETAIITLSKDGR---ITEWNKKAEQLFGLKKENVLGRRLKDLPDF---EEIGSVAESVFENKEPVFLNF--- 80 (349)
T ss_dssp CCSSGGGSSSEEEEEESSSB---CSCBCHHHHHHHSCCSTTTTTCBSTTSTTT---THHHHHHHHHHHHCCCCEEEC---
T ss_pred HHHHHhhhcCeEEEECCCCC---EEeeHHHHHHHhCCCHHHHcCcCHHHCcCh---hHHHHHHHHHHhcCCceeecc---
Confidence 67899999999999999777 999999999999999999999998777332 223344455555555433221
Q ss_pred ecCCCEEEEEEEEEeeeCCCCCE-EEEEEEEecCCccccccccCCchhhhHHHHHHHHHHhhhhhhhhcc
Q 001869 554 TKSGNKFWNLFHLQPMRDQKGEV-QYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNEAVKE 622 (1002)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~v-~~~vgi~~DITerk~~e~~~~~~~~~~e~~~~~~~~~~~v~~~~~~ 622 (1002)
..+..+|+.++..|+++..|.. .+++++++|||++|+.++++...+....+..+...+.|.+.+-+..
T Consensus 81 -~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~DiTe~~~~e~~~~~~~~~~~~~~~~~~i~Helr~pL~~ 149 (349)
T 3a0r_A 81 -YKFGERYFNIRFSPFRNAKTQLLEGVIITIDDVTELYKYEEERKRRERLSILGEMTARVAHEIRNPITI 149 (349)
T ss_dssp -CCBTTBCCEEEEEEECCTTTTSSCEEEEEEECCSTTTTTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -cccCceEEEEEEEEEEcCCCceeeEEEEEEEechHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH
Confidence 2223348888999999988775 5899999999999998877766665556666666666666554433
No 359
>1ll8_A PAS kinase; PAS domain, ligand binding, ligand screening, kinase regulation, transferase; NMR {Homo sapiens} SCOP: d.110.3.5
Probab=99.01 E-value=1.1e-10 Score=108.02 Aligned_cols=103 Identities=16% Similarity=0.196 Sum_probs=77.3
Q ss_pred hccccEEEEcCC-CCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHH-Hhc-CCc---EEEEEEEE
Q 001869 480 RIEKNFVITDPR-LPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAA-IDN-QTD---VTVQLINY 553 (1002)
Q Consensus 480 ~~~~~I~i~D~~-G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~-l~~-~~~---~~~e~~~~ 553 (1002)
+++++|+++|.+ |+ |+++|++|+++|||+++|++|++...+.+++.... ...+... +.. +.. ...+...+
T Consensus 6 ~~~~~i~~~d~~~g~---I~~~N~aa~~l~G~~~~el~g~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (114)
T 1ll8_A 6 EFNKAIFTVDAKTTE---ILVANDKACGLLGYSSQDLIGQKLTQFFLRSDSDV-VEALSEEHMEADGHAAVVFGTVVDII 81 (114)
T ss_dssp TTTCEEEEEETTTCB---EEEECTTHHHHHTCCTTTTTTSBGGGGSSCTTTHH-HHHTTSSTTSSSSCSSCCCSSSEEEC
T ss_pred CCCceEEEEECCCCe---EEEehHHHHHHhCCCHHHHcCCCHHHhcCcchhHH-HHHHHHHhhccCCcceeccCcEEEEE
Confidence 356899999997 66 99999999999999999999999888887765432 2222221 111 111 13356678
Q ss_pred ecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCc
Q 001869 554 TKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSE 588 (1002)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITe 588 (1002)
++||+.+|+.+++.|+.+..+. +++++++|++.
T Consensus 82 ~~dG~~~~v~~~~~~~~~~~~~--~~v~~~~~~~~ 114 (114)
T 1ll8_A 82 SRSGEKIPVSVWMKRMRQERRL--CCVVVLEPVER 114 (114)
T ss_dssp CTTCCCEEEECCEECCBSSSSB--EEEEEEEECCC
T ss_pred ecCCCEEEEEEEEEeeccCCcc--EEEEEEeecCC
Confidence 9999999999999999876543 67899999863
No 360
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.00 E-value=6.6e-10 Score=119.21 Aligned_cols=134 Identities=13% Similarity=0.084 Sum_probs=100.0
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCC--cceEEEEEEeCCeEEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF--VPALYASFQTKTHVCL 746 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpn--Iv~l~~~~~~~~~~~l 746 (1002)
..|.+....+.|..+.||++.. .+|..+++|+.... ....+..|..+++.+.+.+ +++++.++...+..|+
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~------~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~ 92 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG------ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWL 92 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC------TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEE
T ss_pred CCCceEecccCCCCceEEEEec-CCCCeEEEEeCCcc------cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEE
Confidence 3566554445667799999965 55778999987643 1234677899998885433 6678998888888999
Q ss_pred EEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-----------------------------------
Q 001869 747 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG----------------------------------- 791 (1002)
Q Consensus 747 V~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~g----------------------------------- 791 (1002)
||||++|.+|. ... ... ..++.+++..|..||+..
T Consensus 93 v~e~i~G~~l~--~~~-----~~~---~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (264)
T 1nd4_A 93 LLGEVPGQDLL--SSH-----LAP---AEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEH 162 (264)
T ss_dssp EEECCSSEETT--TSC-----CCH---HHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGG
T ss_pred EEEecCCcccC--cCc-----CCH---hHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhc
Confidence 99999998884 211 222 255677888888888753
Q ss_pred -----------------------cccCCCCCCCEEEccCCcEEEEeccCCc
Q 001869 792 -----------------------IIYRDLKPENVLLQGNGHVSLTDFDLSC 819 (1002)
Q Consensus 792 -----------------------IiHrDLKP~NILl~~~g~vkL~DFG~a~ 819 (1002)
++|+|++|.|||++.++.+.|+|||.+.
T Consensus 163 ~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 163 QGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp TTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred cCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 9999999999999876667799999874
No 361
>3cax_A Uncharacterized protein PF0695; structural genomics, unknown function, PSI-2, protein struct initiative; 2.43A {Pyrococcus furiosus dsm 3638}
Probab=98.96 E-value=9.5e-10 Score=124.76 Aligned_cols=121 Identities=13% Similarity=0.195 Sum_probs=98.5
Q ss_pred cchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEE
Q 001869 185 PRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYC 264 (1002)
Q Consensus 185 ~~~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~ 264 (1002)
....+.++++++++++||+++|. +|+|+++|++ ++++ ++.++++|+++..++++. .......+..++.+|....
T Consensus 235 ~~~~~~l~~IL~~l~dgIivvD~---~g~I~~~N~a-e~i~-~~~~e~iGr~v~~~~p~~-~~~~~~~l~~~l~~g~~~~ 308 (369)
T 3cax_A 235 YLNIEELKAIFEALPVDVTFIDK---DDRVRFFSPG-ERIF-TRTPSVLGRPVQLCHPPK-SVYVVNKILKAFKEGRKKE 308 (369)
T ss_dssp EECHHHHHHHHHHSSSEEEEECT---TSBEEEECCS-SCSS-CCCGGGTTCBTTTSSCGG-GHHHHHHHHHHHHHTSCSC
T ss_pred hhhHHHHHHHHHhCCCcEEEECC---CCcEEEEcCH-HHcc-CChHHHcCCcHHHHCChh-hHHHHHHHHHHHHcCCceE
Confidence 34556789999999999999999 8889999999 9999 999999999998877643 2333455667777777655
Q ss_pred EEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhh
Q 001869 265 GRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (1002)
Q Consensus 265 ~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~l~ 314 (1002)
.+.+. .++| .++.++.+||+|.+|.++|++.+++|||+.++++++.+
T Consensus 309 ~~~~~-~~~g--~~v~v~~~PI~d~~G~~~G~v~v~~DITe~~~le~~rr 355 (369)
T 3cax_A 309 ATFWL-RLRE--KYVYIKYVPLFNEKGEYIGTLEMTMDIAPYKKIEGEKR 355 (369)
T ss_dssp EEEEE-EETT--EEEEEEEEEEECTTSCEEEEEEEEEECHHHHTCCSCCC
T ss_pred EEEEE-eeCC--EEEEEEEEEEECCCCCEEEEEEEEEcCHHHHHHHHHhH
Confidence 55544 3466 47889999999999999999999999999998876644
No 362
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.94 E-value=1.3e-09 Score=123.43 Aligned_cols=142 Identities=18% Similarity=0.261 Sum_probs=106.9
Q ss_pred cccccccccCCcEEEEEEEEcCCCeEEEEEEee--cccccChhHHHHHHHHHHHHHhCC--CCCcceEEEEEEeC---Ce
Q 001869 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMD--KGVMLNRNKVHRACAEREILDMLD--HPFVPALYASFQTK---TH 743 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~--~~~~~~~~~~~~~~~E~~il~~l~--hpnIv~l~~~~~~~---~~ 743 (1002)
...++.|+.|.++.||++... +..+++|... .... ......+.+|..+++.|. +..+++++.++.+. +.
T Consensus 40 ~~~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~--~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~ 115 (359)
T 3dxp_A 40 PLSVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKL--LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGR 115 (359)
T ss_dssp CCEEEECCC-CCSCEEEEECS--SCEEEEECCCC------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSS
T ss_pred CceEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCC--CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCC
Confidence 334678899999999999863 4678899775 3221 112346778999999996 45688999888766 45
Q ss_pred EEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH----------------------------------
Q 001869 744 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC---------------------------------- 789 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~---------------------------------- 789 (1002)
.|+||||++|..+.+.. ...++......++.+++..|+.||+
T Consensus 116 ~~~vme~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (359)
T 3dxp_A 116 AFYIMEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSET 191 (359)
T ss_dssp CEEEEECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCC
T ss_pred eEEEEEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCC
Confidence 89999999988875421 1237788888999999999999997
Q ss_pred ------------------------cCcccCCCCCCCEEEccCCc--EEEEeccCCcc
Q 001869 790 ------------------------QGIIYRDLKPENVLLQGNGH--VSLTDFDLSCL 820 (1002)
Q Consensus 790 ------------------------~gIiHrDLKP~NILl~~~g~--vkL~DFG~a~~ 820 (1002)
..++|+|++|.|||++.++. +.|+||+.+..
T Consensus 192 ~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 192 ESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp SCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred cCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 35899999999999997753 68999999854
No 363
>3a0r_A Sensor protein; four helix bundle, PAS fold, kinase, phosphoprotein, transfe two-component regulatory system; 3.80A {Thermotoga maritima}
Probab=98.93 E-value=4.6e-10 Score=126.03 Aligned_cols=121 Identities=11% Similarity=0.112 Sum_probs=90.1
Q ss_pred ccchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcE
Q 001869 184 LPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSY 263 (1002)
Q Consensus 184 L~~~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~ 263 (1002)
++++++.++.++++++++|+++|. +|+|+++|++|++++||+.+|++|+++..+.++ ......+...+..+...
T Consensus 3 l~~~~~~~~~i~~~~~~~i~~~d~---~g~i~~~N~a~~~l~G~~~~e~~G~~~~~~~~~---~~~~~~~~~~~~~~~~~ 76 (349)
T 3a0r_A 3 VEHLRNFSESILESLETAIITLSK---DGRITEWNKKAEQLFGLKKENVLGRRLKDLPDF---EEIGSVAESVFENKEPV 76 (349)
T ss_dssp ------CCCSSGGGSSSEEEEEES---SSBCSCBCHHHHHHHSCCSTTTTTCBSTTSTTT---THHHHHHHHHHHHCCCC
T ss_pred hHHHHHHHHHHHhhhcCeEEEECC---CCCEEeeHHHHHHHhCCCHHHHcCcCHHHCcCh---hHHHHHHHHHHhcCCce
Confidence 345556678899999999999999 888999999999999999999999998877332 23334455566666554
Q ss_pred EEEEEEEecCCcEEEEEEEeeeeecCCCCE-EEEEEEEeccchhhHHHHHhh
Q 001869 264 CGRLLNYKKDGTPFWNLLTIAPIKDDEGKV-LKFIGMQVEVSKHTEGAKDKM 314 (1002)
Q Consensus 264 ~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v-~~~v~~~~DITerk~~e~~l~ 314 (1002)
.... ..+...|+.++++|+.+.+|.. .|++++++|||++++++++++
T Consensus 77 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~DiTe~~~~e~~~~ 124 (349)
T 3a0r_A 77 FLNF----YKFGERYFNIRFSPFRNAKTQLLEGVIITIDDVTELYKYEEERK 124 (349)
T ss_dssp EEEC----CCBTTBCCEEEEEEECCTTTTSSCEEEEEEECCSTTTTTTTTTT
T ss_pred eecc----cccCceEEEEEEEEEEcCCCceeeEEEEEEEechHHHHHHHHHH
Confidence 3221 2223348889999999888875 589999999999999888765
No 364
>2w0n_A Sensor protein DCUS; signal transduction, two-component regulatory system, PAS, kinase, membrane, transferase, solid state cell inner membrane; NMR {Escherichia coli}
Probab=98.92 E-value=2.5e-10 Score=104.99 Aligned_cols=108 Identities=11% Similarity=0.156 Sum_probs=85.1
Q ss_pred ccccchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCC---ChhHHcCCCCCcCCCCCCChHHHHHHHHHHH
Q 001869 182 KGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGY---TSKEVVGRNCRFLQGAGTDPEDVAKIRETLQ 258 (1002)
Q Consensus 182 ~~L~~~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gy---s~eEliG~~~~~l~~~~~~~~~~~~i~~~l~ 258 (1002)
+++.+..+.++.++++++++|+++|. +|+|+++|++|++++|| +.++++|+++..++++.. +...+.
T Consensus 8 ~~l~~~~~~~~~il~~~~~~i~~~d~---~g~i~~~N~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~-------~~~~~~ 77 (118)
T 2w0n_A 8 YEISTLFEQRQAMLQSIKEGVVAVDD---RGEVTLINDAAQELLNYRKSQDDEKLSTLSHSWSQVVD-------VSEVLR 77 (118)
T ss_dssp HHHCTTHHHHHHHHHCCCCCCEEEBT---TTBCCCBCHHHHHHHCSCTTTTTSSCCCTTCCCSCTHH-------HHHHHH
T ss_pred HHHHHHHHHHHHHHhhccccEEEECC---CCcEeehhHHHHHHhCCCccChhhhhccCcccccCchh-------HHHHhc
Confidence 45667778899999999999999998 88899999999999998 889999999887765421 445555
Q ss_pred cCCcEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccc
Q 001869 259 NGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (1002)
Q Consensus 259 ~g~~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DIT 304 (1002)
.+....... ...+| .|+.++..|+.+ +|.+.|++++++|||
T Consensus 78 ~~~~~~~~~--~~~~~--~~~~~~~~p~~~-~g~~~g~v~~~~DiT 118 (118)
T 2w0n_A 78 DGTPRRDEE--ITIKD--RLLLINTVPVRS-NGVIIGAISTFRDKT 118 (118)
T ss_dssp TTCCCCCCC--EESSS--CEECCCEECCCC-SSCCCCEEECCCCCC
T ss_pred cCceeccEE--EEECC--EEEEEeeceeee-CCEEEEEEEEEEeCC
Confidence 555432211 23456 477888999987 788889999999997
No 365
>3a0s_A Sensor protein; PAS-fold, kinase, phosphoprotein, transferase, two-component regulatory system; HET: PG4 PGE; 1.47A {Thermotoga maritima} PDB: 3a0v_A*
Probab=98.90 E-value=1.3e-08 Score=88.56 Aligned_cols=95 Identities=12% Similarity=0.040 Sum_probs=72.9
Q ss_pred cCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCcEE
Q 001869 198 FQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPF 277 (1002)
Q Consensus 198 ~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~ 277 (1002)
++++|+++|. +|+|+++|+++++++||+.++++|+++..+ + . .......+...+..+..+.. .. .+|...
T Consensus 1 ~~~~i~~~d~---~g~i~~~N~~~~~l~g~~~~~~~g~~~~~~-~-~-~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~ 70 (96)
T 3a0s_A 1 METAIITLSK---DGRITEWNKKAEQLFGLKKENVLGRRLKDL-P-D-FEEIGSVAESVFENKEPVFL--NF--YKFGER 70 (96)
T ss_dssp CCCEEEEEET---TSBEEEECHHHHHHHCCCHHHHTTSBGGGS-T-T-CHHHHHHHHHHHHHTCCEEE--EE--EEETTE
T ss_pred CCceEEEEcC---CCCEeehhHHHHHHhCCCHHHhcCCCHHHC-c-c-hHHHHHHHHHHhccCCeEEE--EE--EcCCcE
Confidence 4689999998 888999999999999999999999998876 2 2 23444556666666665532 22 234446
Q ss_pred EEEEEeeeeecCCCC-EEEEEEEEec
Q 001869 278 WNLLTIAPIKDDEGK-VLKFIGMQVE 302 (1002)
Q Consensus 278 w~~~~~~pi~d~~G~-v~~~v~~~~D 302 (1002)
|+.+++.|+.+.+|. +.+++++++|
T Consensus 71 ~~~~~~~p~~~~~~~~~~g~v~~~~D 96 (96)
T 3a0s_A 71 YFNIRFSPFRNAKTQLLEGVIITIDD 96 (96)
T ss_dssp EEEEEEEEEECTTTCCEEEEEEEEEC
T ss_pred EEEEEEEEeEcCCCCeeeEEEEEecC
Confidence 899999999988665 6789998887
No 366
>2ykf_A Pdtas, probable sensor histidine kinase pdtas; transferase, two-component system, GAF domain, PAS domain; 2.00A {Mycobacterium tuberculosis} PDB: 2ykh_A
Probab=98.40 E-value=1.8e-10 Score=126.91 Aligned_cols=113 Identities=16% Similarity=0.081 Sum_probs=78.7
Q ss_pred HHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcC---CChhhhcCCCCccccCCC---CCH--HHHHHHHHHHhc-CCc
Q 001869 475 ATTLERIEKNFVITDPRLPDNPIIFASDSFLELTE---YSREEILGRNCRFLQGPE---TDP--ATVRKIRAAIDN-QTD 545 (1002)
Q Consensus 475 ~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~G---ys~eEliGk~~~~l~~~~---~~~--~~~~~l~~~l~~-~~~ 545 (1002)
+.+++++++||+++|.+|+ |+++|++++++|| ++ ++++|++...+.+.. ... .....+...+.+ +..
T Consensus 173 ~~~~~~~~dGIivvD~~G~---Ii~~N~aA~~ll~~lG~~-~~~iGk~l~el~~~~~~~~~~~~~~~~~l~~vl~~~~~~ 248 (305)
T 2ykf_A 173 SRSSPRAGDGFIRLDVDGV---VSYASPNALSAYHRMGLT-TELEGVNLIDATRPLISDPFEAHEVDEHVQDLLAGDGKG 248 (305)
Confidence 4578889999999999777 9999999999985 55 789999977766432 100 112222223333 333
Q ss_pred EEEEEEEEecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCccccccccCC
Q 001869 546 VTVQLINYTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSI 597 (1002)
Q Consensus 546 ~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e~~~~ 597 (1002)
...+.. ..| .++.++..|+++ +|++.|++.+++|||+.++.+++++
T Consensus 249 ~~~ei~---~~~--~~l~v~~~Pi~~-~g~~~G~Vvv~rDITE~~~lE~eL~ 294 (305)
T 2ykf_A 249 MRMEVD---AGG--ATVLLRTLPLVV-AGRNVGAAILIRDVTEVKRRDRALI 294 (305)
Confidence 322221 223 467788899986 5888899999999999999876653
No 367
>1nwz_A PYP, photoactive yellow protein; PAS, LOV, GAF, domains fold, signaling protein; HET: HC4; 0.82A {Halorhodospira halophila} SCOP: d.110.3.1 PDB: 1kou_A* 1ot9_A* 1otb_A* 1s4r_A* 1s4s_A* 1ts0_A* 1ts6_A* 1ts7_A* 1ts8_A* 1uwn_X* 1uwp_X* 2d01_A* 2phy_A* 2pyp_A* 2pyr_A* 2qj5_A* 2qj7_A* 2qws_A* 2zoh_A* 2zoi_A* ...
Probab=98.83 E-value=2.4e-08 Score=93.50 Aligned_cols=100 Identities=20% Similarity=0.193 Sum_probs=78.7
Q ss_pred HHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCc-CCCCCCChHHHHHHHHHHHcCCcEEEEEEE-
Q 001869 192 KDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRF-LQGAGTDPEDVAKIRETLQNGQSYCGRLLN- 269 (1002)
Q Consensus 192 ~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~-l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~- 269 (1002)
..++++++.|++++|. +|+|++||+++++++||++++++|+++.. +.+..........+.+.++.|. ...+..+
T Consensus 20 ~~~ld~l~~Gii~lD~---~g~I~~~N~~~e~~sG~~~~eviGk~~f~~~~~~~~~~~f~~rf~~~~~~g~-l~~~~~~v 95 (125)
T 1nwz_A 20 DGQLDGLAFGAIQLDG---DGNILQYNAAEGDITGRDPKQVIGKNFFKDVAPCTDSPEFYGKFKEGVASGN-LNTMFEYT 95 (125)
T ss_dssp HHHHTTCSSEEEEEET---TCBEEEECHHHHHHHCCCHHHHTTSBCCCCCCGGGCSTTTHHHHHHHHHHTC-CEEEEEEE
T ss_pred HHHHhccCceEEEECC---CCEEEEEHHHHHHHhCCCHHHHcCCchhhhccchhcccHHHHHHHHHHhcCc-eeEEEEEE
Confidence 4479999999999999 88899999999999999999999999864 4444556667788888888777 4444444
Q ss_pred EecCCcEEEEEEEeeeeecCCCCEEEEE
Q 001869 270 YKKDGTPFWNLLTIAPIKDDEGKVLKFI 297 (1002)
Q Consensus 270 ~~kdG~~~w~~~~~~pi~d~~G~v~~~v 297 (1002)
.+++|.++ .++++...+.+|...+++
T Consensus 96 ~~~~~~p~--~v~i~l~~~~~~~~~~i~ 121 (125)
T 1nwz_A 96 FDYQMTPT--KVKVHMKKALSGDSYWVF 121 (125)
T ss_dssp ECTTSCCE--EEEEEEEECSSSSEEEEE
T ss_pred EcCCCCEE--EEEEEEEEcCCCCEEEEE
Confidence 49999955 555666677888877553
No 368
>3a0s_A Sensor protein; PAS-fold, kinase, phosphoprotein, transferase, two-component regulatory system; HET: PG4 PGE; 1.47A {Thermotoga maritima} PDB: 3a0v_A*
Probab=98.83 E-value=2.3e-08 Score=86.92 Aligned_cols=95 Identities=17% Similarity=0.156 Sum_probs=72.6
Q ss_pred ccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCCEE
Q 001869 481 IEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGNKF 560 (1002)
Q Consensus 481 ~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG~~~ 560 (1002)
++++|+++|.+|+ |+++|+++++++||+.++++|++...+ +. .......+...+..+..+..+ . .+|..+
T Consensus 1 ~~~~i~~~d~~g~---i~~~N~~~~~l~g~~~~~~~g~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~ 70 (96)
T 3a0s_A 1 METAIITLSKDGR---ITEWNKKAEQLFGLKKENVLGRRLKDL--PD-FEEIGSVAESVFENKEPVFLN--F--YKFGER 70 (96)
T ss_dssp CCCEEEEEETTSB---EEEECHHHHHHHCCCHHHHTTSBGGGS--TT-CHHHHHHHHHHHHHTCCEEEE--E--EEETTE
T ss_pred CCceEEEEcCCCC---EeehhHHHHHHhCCCHHHhcCCCHHHC--cc-hHHHHHHHHHHhccCCeEEEE--E--EcCCcE
Confidence 3689999999777 999999999999999999999997776 32 234445566666666655332 2 234446
Q ss_pred EEEEEEEeeeCCCCC-EEEEEEEEec
Q 001869 561 WNLFHLQPMRDQKGE-VQYFIGVQLD 585 (1002)
Q Consensus 561 wv~~~~~pi~d~~G~-v~~~vgi~~D 585 (1002)
|+.++..|+.+.+|+ +.+++++++|
T Consensus 71 ~~~~~~~p~~~~~~~~~~g~v~~~~D 96 (96)
T 3a0s_A 71 YFNIRFSPFRNAKTQLLEGVIITIDD 96 (96)
T ss_dssp EEEEEEEEEECTTTCCEEEEEEEEEC
T ss_pred EEEEEEEEeEcCCCCeeeEEEEEecC
Confidence 999999999988665 6789999887
No 369
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.82 E-value=3.9e-09 Score=116.50 Aligned_cols=134 Identities=18% Similarity=0.178 Sum_probs=101.1
Q ss_pred ccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCC--cceEEEEEEeCC---eEEEE
Q 001869 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPF--VPALYASFQTKT---HVCLI 747 (1002)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hpn--Iv~l~~~~~~~~---~~~lV 747 (1002)
++.++.|.++.||++. ..+++|+.... .....+.+|..+++.+ .+.. ++.++......+ ..|+|
T Consensus 25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~-----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~v 94 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN-----RDFIFKFPKHS-----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAG 94 (304)
T ss_dssp CCEEEECSSEEEEEST-----TSEEEEEESSH-----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEE
T ss_pred eEecCCCCcceEEEEC-----CEEEEEecCCc-----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEE
Confidence 4568999999999874 35889986432 3456788899999888 3333 455655544333 34899
Q ss_pred EecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH--------------------------------------
Q 001869 748 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-------------------------------------- 789 (1002)
Q Consensus 748 ~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-------------------------------------- 789 (1002)
|++++|.+|...... .++......++.+++..|+.||+
T Consensus 95 m~~i~G~~l~~~~~~----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
T 3sg8_A 95 FTKIKGVPLTPLLLN----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQM 170 (304)
T ss_dssp EECCCCEECCHHHHH----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHH
T ss_pred EcccCCeECCccccc----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccH
Confidence 999999998764432 27788888899999999999996
Q ss_pred --------------------cCcccCCCCCCCEEEcc--CCcEEEEeccCCccc
Q 001869 790 --------------------QGIIYRDLKPENVLLQG--NGHVSLTDFDLSCLT 821 (1002)
Q Consensus 790 --------------------~gIiHrDLKP~NILl~~--~g~vkL~DFG~a~~~ 821 (1002)
..++|+|++|.||+++. ++.+.|+||+.+...
T Consensus 171 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~ 224 (304)
T 3sg8_A 171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAIS 224 (304)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccC
Confidence 13699999999999998 456889999998553
No 370
>2w0n_A Sensor protein DCUS; signal transduction, two-component regulatory system, PAS, kinase, membrane, transferase, solid state cell inner membrane; NMR {Escherichia coli}
Probab=98.81 E-value=1e-09 Score=100.88 Aligned_cols=101 Identities=19% Similarity=0.175 Sum_probs=78.4
Q ss_pred ccHHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCC---ChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEE
Q 001869 472 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEY---SREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTV 548 (1002)
Q Consensus 472 ~~l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gy---s~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~ 548 (1002)
..++.++++++++|+++|.+|+ |+++|+++++++|| +.++++|+++..+.++.. +...+..+.....
T Consensus 15 ~~~~~il~~~~~~i~~~d~~g~---i~~~N~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~ 84 (118)
T 2w0n_A 15 EQRQAMLQSIKEGVVAVDDRGE---VTLINDAAQELLNYRKSQDDEKLSTLSHSWSQVVD-------VSEVLRDGTPRRD 84 (118)
T ss_dssp HHHHHHHHCCCCCCEEEBTTTB---CCCBCHHHHHHHCSCTTTTTSSCCCTTCCCSCTHH-------HHHHHHTTCCCCC
T ss_pred HHHHHHHhhccccEEEECCCCc---EeehhHHHHHHhCCCccChhhhhccCcccccCchh-------HHHHhccCceecc
Confidence 3478999999999999999777 99999999999998 889999999777665431 3444555544322
Q ss_pred EEEEEecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCC
Q 001869 549 QLINYTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 587 (1002)
Q Consensus 549 e~~~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DIT 587 (1002)
+. ...+| .|+.++..|+.+ +|++.+++++++|||
T Consensus 85 ~~--~~~~~--~~~~~~~~p~~~-~g~~~g~v~~~~DiT 118 (118)
T 2w0n_A 85 EE--ITIKD--RLLLINTVPVRS-NGVIIGAISTFRDKT 118 (118)
T ss_dssp CC--EESSS--CEECCCEECCCC-SSCCCCEEECCCCCC
T ss_pred EE--EEECC--EEEEEeeceeee-CCEEEEEEEEEEeCC
Confidence 11 23466 477888899987 788889999999998
No 371
>1mzu_A PPR; photoactive yellow protein, PAS, PYP, signaling protein; HET: HC4; 2.00A {Rhodospirillum centenum} SCOP: d.110.3.1
Probab=98.80 E-value=3.5e-08 Score=92.53 Aligned_cols=99 Identities=12% Similarity=0.093 Sum_probs=78.0
Q ss_pred HHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCc-CCCCCCChHHHHHHHHHHHcCCcEEEEEEE-E
Q 001869 193 DALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRF-LQGAGTDPEDVAKIRETLQNGQSYCGRLLN-Y 270 (1002)
Q Consensus 193 ~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~-l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~-~ 270 (1002)
.++++++.|++++|. +|+|++||+++++++||++++++|+++.. +.+..........+.+.++.|. ...+..+ .
T Consensus 26 ~~ld~l~~GiivlD~---dg~I~~~N~~~e~isG~s~eeviGk~~f~~~~p~~~~~~f~grf~~~~~~G~-l~~~~~yv~ 101 (129)
T 1mzu_A 26 AEFDALPVGAIQVDG---SGVIHRYNRTESRLSGRIPERVIGRNFFTEVAPCTNIPAFSGRFMDGVTSGT-LDARFDFVF 101 (129)
T ss_dssp TTGGGCSSEEEEEET---TCBEEEECHHHHHHHCCCHHHHTTSBCCCCCCGGGCSTTTHHHHHHHHHTSC-CEEEEEEEE
T ss_pred HHHhccCceEEEECC---CCeEEEEHHHHHHHhCCCHHHHcCCchhhhccchhcccHHHHHHHHHHhcCc-eeEEEEEEE
Confidence 368999999999999 88899999999999999999999999864 4444556667788888888776 4444444 4
Q ss_pred ecCCcEEEEEEEeeeeecCCCCEEEEE
Q 001869 271 KKDGTPFWNLLTIAPIKDDEGKVLKFI 297 (1002)
Q Consensus 271 ~kdG~~~w~~~~~~pi~d~~G~v~~~v 297 (1002)
+++|.. +.+.++...+.+|...+++
T Consensus 102 ~~~~~p--~~v~i~l~~~~~~~~~~i~ 126 (129)
T 1mzu_A 102 DFQMAP--VRVQIRMQNAGVPDRYWIF 126 (129)
T ss_dssp ECSSCE--EEEEEEEEECSSTTEEEEE
T ss_pred cCCCCE--EEEEEEEEEcCCCCEEEEE
Confidence 999995 4556666677888877653
No 372
>3cax_A Uncharacterized protein PF0695; structural genomics, unknown function, PSI-2, protein struct initiative; 2.43A {Pyrococcus furiosus dsm 3638}
Probab=98.80 E-value=8e-09 Score=117.12 Aligned_cols=114 Identities=16% Similarity=0.164 Sum_probs=92.8
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001869 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (1002)
Q Consensus 474 l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~ 553 (1002)
|..+++++++||+++|.+|+ |+++|++ +++| ++.++++|+++..+.++. .......+...+..|.....+...
T Consensus 241 l~~IL~~l~dgIivvD~~g~---I~~~N~a-e~i~-~~~~e~iGr~v~~~~p~~-~~~~~~~l~~~l~~g~~~~~~~~~- 313 (369)
T 3cax_A 241 LKAIFEALPVDVTFIDKDDR---VRFFSPG-ERIF-TRTPSVLGRPVQLCHPPK-SVYVVNKILKAFKEGRKKEATFWL- 313 (369)
T ss_dssp HHHHHHHSSSEEEEECTTSB---EEEECCS-SCSS-CCCGGGTTCBTTTSSCGG-GHHHHHHHHHHHHHTSCSCEEEEE-
T ss_pred HHHHHHhCCCcEEEECCCCc---EEEEcCH-HHcc-CChHHHcCCcHHHHCChh-hHHHHHHHHHHHHcCCceEEEEEE-
Confidence 78999999999999999777 9999999 9999 999999999988776543 333445566677777665555544
Q ss_pred ecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCccccccccC
Q 001869 554 TKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNS 596 (1002)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITerk~~e~~~ 596 (1002)
..+| .++.++..|++|.+|+++|++++++|||+.++.++..
T Consensus 314 ~~~g--~~v~v~~~PI~d~~G~~~G~v~v~~DITe~~~le~~r 354 (369)
T 3cax_A 314 RLRE--KYVYIKYVPLFNEKGEYIGTLEMTMDIAPYKKIEGEK 354 (369)
T ss_dssp EETT--EEEEEEEEEEECTTSCEEEEEEEEEECHHHHTCCSCC
T ss_pred eeCC--EEEEEEEEEEECCCCCEEEEEEEEEcCHHHHHHHHHh
Confidence 3456 4788999999999999999999999999998876543
No 373
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=98.77 E-value=6.8e-09 Score=105.62 Aligned_cols=109 Identities=12% Similarity=0.103 Sum_probs=82.8
Q ss_pred cchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCC--c
Q 001869 185 PRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ--S 262 (1002)
Q Consensus 185 ~~~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~--~ 262 (1002)
++....++.+++++++||+++|. +|+|+++|++|++++|++.++++|+++..++++.. +...+..+. .
T Consensus 76 ~~~~~~l~~il~~~~~gvi~~D~---~g~I~~~N~aa~~llg~~~~~~~g~~~~~~~~~~~-------~~~~~~~~~~~~ 145 (190)
T 2jhe_A 76 EREHLALSALLEALPEPVLSVDM---KSKVDMANPASCQLFGQKLDRLRNHTAAQLINGFN-------FLRWLESEPQDS 145 (190)
T ss_dssp THHHHHHHHHHHHCSSCEEEECT---TCBEEEECHHHHHHHTSCHHHHTTSBGGGTSTTCC-------HHHHHHTCCCSC
T ss_pred HHHHHHHHHHHHhCCCcEEEEcC---CCCEEEEcHHHHHHhCCCHHHhcCccHHHHhCCCC-------HHHHHhcCCCCC
Confidence 45567899999999999999999 88899999999999999999999999887766542 123344443 2
Q ss_pred EEEEEEEEecCCcEEEEEEEeeeeecCCCC----EEEEEEEEeccchhhH
Q 001869 263 YCGRLLNYKKDGTPFWNLLTIAPIKDDEGK----VLKFIGMQVEVSKHTE 308 (1002)
Q Consensus 263 ~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~----v~~~v~~~~DITerk~ 308 (1002)
...++. .+|.. +.++++|+.+.+|. +.|++.+++|||++++
T Consensus 146 ~~~~~~---~~g~~--~~~~~~pi~~~~~~~~~~~~g~v~~~~DiTe~~~ 190 (190)
T 2jhe_A 146 HNEHVV---INGQN--FLMEITPVYLQDENDQHVLTGAVVMLRSTIRMGR 190 (190)
T ss_dssp EEEEEE---ETTEE--EEEEEEEETTTTEEEEEEEE-HHHHHHHHTTTCC
T ss_pred cceEEE---ECCeE--EEEEEEEEEecCCCCcceEEeEEEEEeccchhcC
Confidence 333333 27754 56778999875665 7888999999998763
No 374
>2ykf_A Pdtas, probable sensor histidine kinase pdtas; transferase, two-component system, GAF domain, PAS domain; 2.00A {Mycobacterium tuberculosis} PDB: 2ykh_A
Probab=98.21 E-value=1.2e-09 Score=120.52 Aligned_cols=160 Identities=16% Similarity=0.130 Sum_probs=107.2
Q ss_pred cccCCCCCCCCCCcCCCCCCCcccccc-ccccc---ccccccccchHHHHHHHH-----------------HhcCCcEEE
Q 001869 146 RTSGGDDPNGKPGTSRRNSNNSVRSSG-EMSDE---GGKEKGLPRVSDIVKDAL-----------------STFQQTFVV 204 (1002)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-dit~~---~~~e~~L~~~~~~l~~il-----------------e~~~d~i~v 204 (1002)
|..+ ...+..|+.......+.+.... |++.. +..|.+..+..+.|..++ +++++||++
T Consensus 107 ~~~~-v~~~~~Pi~~~g~vigvl~~~~~di~~~~~~~~~e~~~~~~~~~L~~mi~~~~~~~~~~~~~~~~~~~~~dGIiv 185 (305)
T 2ykf_A 107 QHDG-HSVEVSPVRFGDQVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDGFIR 185 (305)
Confidence 4455 5666777766443334444447 88876 345555555555566555 489999999
Q ss_pred EeCCCCCCcEEEcchHHHHHcC---CChhHHcCCCCCcCCCCC---C-Ch-HHHHHHHHHHHc-CCcEEEEEEEEecCCc
Q 001869 205 SDATKPDYPIMYASAGFFKMTG---YTSKEVVGRNCRFLQGAG---T-DP-EDVAKIRETLQN-GQSYCGRLLNYKKDGT 275 (1002)
Q Consensus 205 ~D~~~~dG~I~~~N~a~~~l~G---ys~eEliG~~~~~l~~~~---~-~~-~~~~~i~~~l~~-g~~~~~e~~~~~kdG~ 275 (1002)
+|. +|+|+++|+++++++| +. ++++|+++..+++.. . .. .....+..++.+ +.....+.. ..|
T Consensus 186 vD~---~G~Ii~~N~aA~~ll~~lG~~-~~~iGk~l~el~~~~~~~~~~~~~~~~~l~~vl~~~~~~~~~ei~---~~~- 257 (305)
T 2ykf_A 186 LDV---DGVVSYASPNALSAYHRMGLT-TELEGVNLIDATRPLISDPFEAHEVDEHVQDLLAGDGKGMRMEVD---AGG- 257 (305)
Confidence 999 7889999999999985 55 789999988766543 1 00 112222334443 333322221 223
Q ss_pred EEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhcC
Q 001869 276 PFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLR 316 (1002)
Q Consensus 276 ~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~~e~~l~~~ 316 (1002)
.++.++..|+.+ +|.+.|++.+++|||+.++.|++|+.+
T Consensus 258 -~~l~v~~~Pi~~-~g~~~G~Vvv~rDITE~~~lE~eL~~K 296 (305)
T 2ykf_A 258 -ATVLLRTLPLVV-AGRNVGAAILIRDVTEVKRRDRALISK 296 (305)
Confidence 467788899986 588889999999999999999998754
No 375
>3rty_A Period circadian protein; PAS domain, signalling, timeless, circadian clock protein; 2.85A {Drosophila melanogaster} PDB: 1wa9_A 3gec_A
Probab=98.72 E-value=2.6e-08 Score=110.87 Aligned_cols=106 Identities=10% Similarity=0.030 Sum_probs=90.4
Q ss_pred CCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCc-----EEEEEEEEecC
Q 001869 199 QQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS-----YCGRLLNYKKD 273 (1002)
Q Consensus 199 ~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~-----~~~e~~~~~kd 273 (1002)
.+.++..+. ||+|+|+|+++..++||+++|++|+++..++||++.......+...+..|.. ...+++++++|
T Consensus 154 ~~fi~r~~~---dG~~~yvn~~~~~lLGY~peELiG~s~~~~vHPdD~~~~~~~~~~~l~~G~~~~~~~~s~~yR~~~kd 230 (339)
T 3rty_A 154 PKFAIRHTA---TGIISHVDSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQN 230 (339)
T ss_dssp CEEEEEEET---TCBEEEECTTHHHHHCCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHHHHTTSTTCCCBCCCEEEECTT
T ss_pred ceEEEEECC---CCeEEEcChhhhcccCCCHHHHcCCcHHHEECHHHHHHHHHHHHHHHHcCCcccccccceEEEEEccC
Confidence 455666676 8889999999999999999999999999999999888777888888877664 35789999999
Q ss_pred CcEEEEEEEeeeeecCC-CCEEEEEEEEeccchhh
Q 001869 274 GTPFWNLLTIAPIKDDE-GKVLKFIGMQVEVSKHT 307 (1002)
Q Consensus 274 G~~~w~~~~~~pi~d~~-G~v~~~v~~~~DITerk 307 (1002)
|..+|++.+.++++|.. +.+.+++++.+.|+...
T Consensus 231 G~~vWlet~~~~~~np~s~~~~~II~~h~vi~~p~ 265 (339)
T 3rty_A 231 GCYVLLETEWTSFVNPWSRKLEFVVGHHRVFQGPK 265 (339)
T ss_dssp SCEEEEEEEEEEEECTTTCSEEEEEEEEEEEECCS
T ss_pred CCEEEEEEEEEEEECCCCCCeeEEEEEEEECCCCC
Confidence 99999999999999865 56678888888888653
No 376
>1nwz_A PYP, photoactive yellow protein; PAS, LOV, GAF, domains fold, signaling protein; HET: HC4; 0.82A {Halorhodospira halophila} SCOP: d.110.3.1 PDB: 1kou_A* 1ot9_A* 1otb_A* 1s4r_A* 1s4s_A* 1ts0_A* 1ts6_A* 1ts7_A* 1ts8_A* 1uwn_X* 1uwp_X* 2d01_A* 2phy_A* 2pyp_A* 2pyr_A* 2qj5_A* 2qj7_A* 2qws_A* 2zoh_A* 2zoi_A* ...
Probab=98.70 E-value=8.9e-08 Score=89.65 Aligned_cols=100 Identities=9% Similarity=0.087 Sum_probs=78.5
Q ss_pred HHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccc-cCCCCCHHHHHHHHHHHhcCCcEEEEEEE-
Q 001869 475 ATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFL-QGPETDPATVRKIRAAIDNQTDVTVQLIN- 552 (1002)
Q Consensus 475 ~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l-~~~~~~~~~~~~l~~~l~~~~~~~~e~~~- 552 (1002)
..++++++.|++++|.+|+ |+++|.++++++||++++++|+++... .+....+.+...+.+.+..|. ...+..+
T Consensus 20 ~~~ld~l~~Gii~lD~~g~---I~~~N~~~e~~sG~~~~eviGk~~f~~~~~~~~~~~f~~rf~~~~~~g~-l~~~~~~v 95 (125)
T 1nwz_A 20 DGQLDGLAFGAIQLDGDGN---ILQYNAAEGDITGRDPKQVIGKNFFKDVAPCTDSPEFYGKFKEGVASGN-LNTMFEYT 95 (125)
T ss_dssp HHHHTTCSSEEEEEETTCB---EEEECHHHHHHHCCCHHHHTTSBCCCCCCGGGCSTTTHHHHHHHHHHTC-CEEEEEEE
T ss_pred HHHHhccCceEEEECCCCE---EEEEHHHHHHHhCCCHHHHcCCchhhhccchhcccHHHHHHHHHHhcCc-eeEEEEEE
Confidence 6689999999999999777 999999999999999999999998654 444555667788888888776 5555555
Q ss_pred EecCCCEEEEEEEEEeeeCCCCCEEEEE
Q 001869 553 YTKSGNKFWNLFHLQPMRDQKGEVQYFI 580 (1002)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~d~~G~v~~~v 580 (1002)
.+++|..++ ++++...+.+|...+++
T Consensus 96 ~~~~~~p~~--v~i~l~~~~~~~~~~i~ 121 (125)
T 1nwz_A 96 FDYQMTPTK--VKVHMKKALSGDSYWVF 121 (125)
T ss_dssp ECTTSCCEE--EEEEEEECSSSSEEEEE
T ss_pred EcCCCCEEE--EEEEEEEcCCCCEEEEE
Confidence 599999555 45566666888776543
No 377
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=98.67 E-value=2.8e-08 Score=101.05 Aligned_cols=103 Identities=11% Similarity=0.057 Sum_probs=78.6
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCC--cEEEEEE
Q 001869 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQT--DVTVQLI 551 (1002)
Q Consensus 474 l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~--~~~~e~~ 551 (1002)
++.+++++++||+++|.+|+ |+++|++++++||++.++++|+++..+.++... ...+..+. ....++.
T Consensus 82 l~~il~~~~~gvi~~D~~g~---I~~~N~aa~~llg~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 151 (190)
T 2jhe_A 82 LSALLEALPEPVLSVDMKSK---VDMANPASCQLFGQKLDRLRNHTAAQLINGFNF-------LRWLESEPQDSHNEHVV 151 (190)
T ss_dssp HHHHHHHCSSCEEEECTTCB---EEEECHHHHHHHTSCHHHHTTSBGGGTSTTCCH-------HHHHHTCCCSCEEEEEE
T ss_pred HHHHHHhCCCcEEEEcCCCC---EEEEcHHHHHHhCCCHHHhcCccHHHHhCCCCH-------HHHHhcCCCCCcceEEE
Confidence 89999999999999999777 999999999999999999999998877665431 22333333 2333332
Q ss_pred EEecCCCEEEEEEEEEeeeCCCCC----EEEEEEEEecCCcccc
Q 001869 552 NYTKSGNKFWNLFHLQPMRDQKGE----VQYFIGVQLDGSEHLE 591 (1002)
Q Consensus 552 ~~~kdG~~~wv~~~~~pi~d~~G~----v~~~vgi~~DITerk~ 591 (1002)
.+|. ++.++..|+++.+|+ +.|++++++|||++++
T Consensus 152 ---~~g~--~~~~~~~pi~~~~~~~~~~~~g~v~~~~DiTe~~~ 190 (190)
T 2jhe_A 152 ---INGQ--NFLMEITPVYLQDENDQHVLTGAVVMLRSTIRMGR 190 (190)
T ss_dssp ---ETTE--EEEEEEEEETTTTEEEEEEEE-HHHHHHHHTTTCC
T ss_pred ---ECCe--EEEEEEEEEEecCCCCcceEEeEEEEEeccchhcC
Confidence 2775 456778899876665 7888999999999874
No 378
>1mzu_A PPR; photoactive yellow protein, PAS, PYP, signaling protein; HET: HC4; 2.00A {Rhodospirillum centenum} SCOP: d.110.3.1
Probab=98.66 E-value=1.3e-07 Score=88.61 Aligned_cols=100 Identities=10% Similarity=0.040 Sum_probs=77.5
Q ss_pred HHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccc-cCCCCCHHHHHHHHHHHhcCCcEEEEEEE-
Q 001869 475 ATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFL-QGPETDPATVRKIRAAIDNQTDVTVQLIN- 552 (1002)
Q Consensus 475 ~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l-~~~~~~~~~~~~l~~~l~~~~~~~~e~~~- 552 (1002)
..++++++.|++++|.+|+ |+++|.++++++||++++++|+++... .+....+.+...+.+.+..|. ...+..+
T Consensus 25 ~~~ld~l~~GiivlD~dg~---I~~~N~~~e~isG~s~eeviGk~~f~~~~p~~~~~~f~grf~~~~~~G~-l~~~~~yv 100 (129)
T 1mzu_A 25 TAEFDALPVGAIQVDGSGV---IHRYNRTESRLSGRIPERVIGRNFFTEVAPCTNIPAFSGRFMDGVTSGT-LDARFDFV 100 (129)
T ss_dssp CTTGGGCSSEEEEEETTCB---EEEECHHHHHHHCCCHHHHTTSBCCCCCCGGGCSTTTHHHHHHHHHTSC-CEEEEEEE
T ss_pred HHHHhccCceEEEECCCCe---EEEEHHHHHHHhCCCHHHHcCCchhhhccchhcccHHHHHHHHHHhcCc-eeEEEEEE
Confidence 3468999999999999777 999999999999999999999998654 344455667788888888666 5555555
Q ss_pred EecCCCEEEEEEEEEeeeCCCCCEEEEE
Q 001869 553 YTKSGNKFWNLFHLQPMRDQKGEVQYFI 580 (1002)
Q Consensus 553 ~~kdG~~~wv~~~~~pi~d~~G~v~~~v 580 (1002)
.+++|..+++ +++...+.+|...+++
T Consensus 101 ~~~~~~p~~v--~i~l~~~~~~~~~~i~ 126 (129)
T 1mzu_A 101 FDFQMAPVRV--QIRMQNAGVPDRYWIF 126 (129)
T ss_dssp EECSSCEEEE--EEEEEECSSTTEEEEE
T ss_pred EcCCCCEEEE--EEEEEEcCCCCEEEEE
Confidence 5999995554 5556666888776543
No 379
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.58 E-value=2e-07 Score=103.49 Aligned_cols=133 Identities=19% Similarity=0.255 Sum_probs=101.8
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCC----CCcceEEEEEEeCCeEE
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH----PFVPALYASFQTKTHVC 745 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h----pnIv~l~~~~~~~~~~~ 745 (1002)
.+..++.++.|..+.||++ +..+++|+.... .....+..|..+++.+.+ ..+++++.+ +..|
T Consensus 38 ~i~~v~~l~~G~~n~vy~v-----g~~~vlR~~~~~-----~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~ 103 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC-----NEQYVVKVPKRD-----SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRF 103 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE-----TTTEEEEEESSH-----HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSC
T ss_pred ceEEEEeCCCCCCceEEEE-----CCEEEEEeCCcH-----HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcE
Confidence 3455678999999999998 556899976432 224567889999998865 234566554 5568
Q ss_pred EEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC----------------------------------
Q 001869 746 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG---------------------------------- 791 (1002)
Q Consensus 746 lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~g---------------------------------- 791 (1002)
+||||++|.+|..... ..++......++.+++..|+.||+..
T Consensus 104 lvme~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (320)
T 3r70_A 104 NIMKYIKGERITYEQY----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQ 179 (320)
T ss_dssp EEEECCCCBCCCHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEeecCCcccccccc----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcc
Confidence 9999999998874432 22677778888889999999988532
Q ss_pred -----------------------------cccCCCCCCCEEEccCCcEEEEeccCCcc
Q 001869 792 -----------------------------IIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 792 -----------------------------IiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
++|+|++|.|||++.++.+.|+||+.+..
T Consensus 180 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 180 LLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp CCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred cccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 38999999999999866679999999854
No 380
>4dj3_A Period circadian protein homolog 3; PAS domain, circadian rhythm, protein binding; 2.50A {Mus musculus}
Probab=98.55 E-value=2.5e-07 Score=101.85 Aligned_cols=98 Identities=13% Similarity=0.096 Sum_probs=82.6
Q ss_pred CCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCc---EEEEEEEEecCCcEEEEEEEee
Q 001869 208 TKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS---YCGRLLNYKKDGTPFWNLLTIA 284 (1002)
Q Consensus 208 ~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~---~~~e~~~~~kdG~~~w~~~~~~ 284 (1002)
.+.||+|+|+|+++..++||.++|++|+++..++||++.....+.+...+.++.. ...++|+++|||..+|++...+
T Consensus 180 h~~dG~~~yvs~~~~~lLGY~peELig~s~~~~vHPdD~~~~~~~~~~~l~~~~~~~f~s~~yR~~~kdG~~vwvet~~~ 259 (317)
T 4dj3_A 180 HTPGCVFLEVDERAVPLLGYLPQDLIGTSILTYLHPEDRPLMVAIHQKVLKYAGHPPFEHSPVRFCTQNGEYVILDSSWS 259 (317)
T ss_dssp ECTTSBEEEECTTHHHHHSCCHHHHTTSBGGGGBCTTTTTHHHHHHHHHHHTTTSCCEECCCEEEECTTSCEEEEEEEEE
T ss_pred ecCCCeEEEEChHHhhhcCcChHHHcCCCHHHeECHHHHHHHHHHHHHHHHcCCCccccceEEEEEccCCCEEEEEEEEE
Confidence 3449999999999999999999999999999999999988888888888887654 3578999999999999999999
Q ss_pred eeecCC-CCEEEEEEEEeccch
Q 001869 285 PIKDDE-GKVLKFIGMQVEVSK 305 (1002)
Q Consensus 285 pi~d~~-G~v~~~v~~~~DITe 305 (1002)
+++|.. +++.++++..+-|+.
T Consensus 260 ~~~np~s~~~e~II~~h~v~~~ 281 (317)
T 4dj3_A 260 SFVNPWSRKVSFIIGRHKVRTS 281 (317)
T ss_dssp EEECSSSCCEEEEEEEEEECCC
T ss_pred EEECCCCCcccEEEEEEEeccC
Confidence 999864 556667777664443
No 381
>3gdi_A Period circadian protein homolog 2; tandem PAS domains, biological rhythms, cytoplasm, nucleus, phosphoprotein, transcription; 2.40A {Mus musculus}
Probab=98.49 E-value=5.1e-07 Score=99.09 Aligned_cols=99 Identities=12% Similarity=0.115 Sum_probs=84.4
Q ss_pred CCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCC-cEE-EEEEEEecCCcEEEEEEEeee
Q 001869 208 TKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ-SYC-GRLLNYKKDGTPFWNLLTIAP 285 (1002)
Q Consensus 208 ~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~-~~~-~e~~~~~kdG~~~w~~~~~~p 285 (1002)
.+.||+|+|+|+++..++||.++|++|+++..++|+++.....+.+...+..+. ... .++|+++|||..+|++...++
T Consensus 171 h~~dG~~~yvd~~~~~lLGY~peELig~s~~~~iHpdD~~~~~~~~~~~l~~~g~~~~~~~yR~~~kdG~~vwvet~~~~ 250 (309)
T 3gdi_A 171 HTPNCLFQAVDERAVPLLGYLPQDLIETPVLVQLHPSDRPLMLAIHKKILQAGGQPFDYSPIRFRTRNGEYITLDTSWSS 250 (309)
T ss_dssp ECTTCBEEEECTTHHHHHSCCHHHHTTSBHHHHBCTTSHHHHHHHHHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred ecCCCeEEEECcccccccCcCHHHHcCCCHHHhCCHHHHHHHHHHHHHHHhcCCceeeceEEEEEccCCCEEEEEEEEEE
Confidence 344999999999999999999999999999889999988777777888887544 455 589999999999999999999
Q ss_pred eecC-CCCEEEEEEEEeccchh
Q 001869 286 IKDD-EGKVLKFIGMQVEVSKH 306 (1002)
Q Consensus 286 i~d~-~G~v~~~v~~~~DITer 306 (1002)
+.+. .+++.++++.-+-|+..
T Consensus 251 ~~np~s~~~e~ii~~h~v~~gp 272 (309)
T 3gdi_A 251 FINPWSRKISFIIGRHKVRVGP 272 (309)
T ss_dssp EECTTTCCEEEEEEEEEEEECC
T ss_pred EECCCCCcccEEEEEEEEccCC
Confidence 9885 56777888888887754
No 382
>4dj2_A Period circadian protein homolog 1; PAS domains, circadian clock protein, protein binding; 2.75A {Mus musculus}
Probab=98.44 E-value=3.9e-07 Score=100.49 Aligned_cols=99 Identities=15% Similarity=0.145 Sum_probs=84.1
Q ss_pred CCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHc-CCcE-EEEEEEEecCCcEEEEEEEeee
Q 001869 208 TKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQN-GQSY-CGRLLNYKKDGTPFWNLLTIAP 285 (1002)
Q Consensus 208 ~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~-g~~~-~~e~~~~~kdG~~~w~~~~~~p 285 (1002)
.+.||+|+|+|+++..++||.++|++|+++..++||++.....+.+...+.. +... ..++|+++|||..+|++...++
T Consensus 182 h~~dG~~~yvd~~~~~lLGY~peELig~s~~~~vHPdD~~~~~~~~~~~l~~~g~~~~~~~yR~~~kdG~~vwvet~~~~ 261 (320)
T 4dj2_A 182 HTPSCLFQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLAGQPFDHSPIRFCARNGEYVTMDTSWAG 261 (320)
T ss_dssp ECTTCBEEEECTTHHHHHSCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHTTSSSCCEECCCEEEECSSSCEEEEECEEEE
T ss_pred ecCCceEEEcCcceeccCCcChHHHcCCcHHHhCCHHHHHHHHHHHHHHHhcCCCcccceEEEEEccCCCEEEEEEEEEE
Confidence 3449999999999999999999999999999999998877777777777774 4455 3689999999999999999999
Q ss_pred eecC-CCCEEEEEEEEeccchh
Q 001869 286 IKDD-EGKVLKFIGMQVEVSKH 306 (1002)
Q Consensus 286 i~d~-~G~v~~~v~~~~DITer 306 (1002)
++|. .+++.++|+..+-|+..
T Consensus 262 ~~np~s~~~e~II~~h~v~~gp 283 (320)
T 4dj2_A 262 FVHPWSRKVAFVLGRHKVRTAP 283 (320)
T ss_dssp EECTTTCSEEEEEEEEEESSCC
T ss_pred EECCCCCCccEEEEEEEEccCC
Confidence 9885 56778888888877764
No 383
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.39 E-value=2.2e-06 Score=94.50 Aligned_cols=133 Identities=18% Similarity=0.144 Sum_probs=98.1
Q ss_pred ccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCC---CcceEEEEEE-eCCeEEEEEe
Q 001869 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHP---FVPALYASFQ-TKTHVCLITD 749 (1002)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp---nIv~l~~~~~-~~~~~~lV~E 749 (1002)
++.++.|....||++ +..+++|+... ......+..|..+|+.|.+. .|++++.+.. ..+..|+|||
T Consensus 24 v~~l~~G~~n~v~~v-----g~~~VlR~~~~-----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e 93 (306)
T 3tdw_A 24 VESLGEGFRNYAILV-----NGDWVFRFPKS-----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYR 93 (306)
T ss_dssp EEEEEECSSEEEEEE-----TTTEEEEEESS-----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEE
T ss_pred eeecCCCcceeEEEE-----CCEEEEEecCC-----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEe
Confidence 456789999999998 45688997532 23456788999999999642 3667777764 4566789999
Q ss_pred cCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc---------------------------------------
Q 001869 750 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ--------------------------------------- 790 (1002)
Q Consensus 750 ~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~--------------------------------------- 790 (1002)
|++|.+|....-. .++......++.++...|+.||+.
T Consensus 94 ~i~G~~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~ 169 (306)
T 3tdw_A 94 KVQGQILGEDGMA----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLR 169 (306)
T ss_dssp CCCSEECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred ccCCeECchhhhh----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhH
Confidence 9999988764221 245666666677777777777653
Q ss_pred ---------------------CcccCCCCCCCEEEcc---CCc-EEEEeccCCcc
Q 001869 791 ---------------------GIIYRDLKPENVLLQG---NGH-VSLTDFDLSCL 820 (1002)
Q Consensus 791 ---------------------gIiHrDLKP~NILl~~---~g~-vkL~DFG~a~~ 820 (1002)
.++|+|++|.|||++. ++. +.|+||+.+..
T Consensus 170 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 170 DYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2489999999999997 455 58999998854
No 384
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.36 E-value=2.6e-06 Score=91.82 Aligned_cols=132 Identities=17% Similarity=0.176 Sum_probs=100.3
Q ss_pred cccCCcE-EEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEEEEEecCCCC
Q 001869 677 LGSGDTG-SVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLITDYCPGG 754 (1002)
Q Consensus 677 LG~G~~g-~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lV~E~~~gg 754 (1002)
+..|..+ .||+......+..+++|+-... ....+..|..+|+.+. +--|++++.++.+.+..|+|||+++|.
T Consensus 32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~------~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~ 105 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS------VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGK 105 (272)
T ss_dssp EECSSSSCEEEEEECCTTCCCEEEEEEETH------HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSE
T ss_pred ccCCCcCCeEEEEEecCCCeEEEEEECCCC------CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCc
Confidence 3445544 6899888777788999986543 3456788999998884 334788999999999999999999999
Q ss_pred cHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHc--------------------------------------------
Q 001869 755 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-------------------------------------------- 790 (1002)
Q Consensus 755 sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~-------------------------------------------- 790 (1002)
++.+..... ......++.++...|..||..
T Consensus 106 ~~~~~~~~~------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (272)
T 4gkh_A 106 TAFQVLEEY------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV 179 (272)
T ss_dssp EHHHHHHHC------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred cccccccCC------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence 988776432 122345667777777777741
Q ss_pred --------------CcccCCCCCCCEEEccCCcEEEEeccCCcc
Q 001869 791 --------------GIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 791 --------------gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
.++|+|+.|.|||++.++.+-|+||+.+..
T Consensus 180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 278999999999999777677999998843
No 385
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.17 E-value=5.9e-06 Score=93.25 Aligned_cols=77 Identities=10% Similarity=0.172 Sum_probs=59.0
Q ss_pred cccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCC--CcceEEEEEEeC-CeEEEE
Q 001869 671 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHP--FVPALYASFQTK-THVCLI 747 (1002)
Q Consensus 671 y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp--nIv~l~~~~~~~-~~~~lV 747 (1002)
...++.|+.|..+.+|++.. ++..+++|+.... ..+..|..+++.|... .+++++.+.... +..|+|
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~--~g~~~vlK~~~~~--------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv 112 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV--GGRGYVLRVNSCA--------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCI 112 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE--TTEEEEEEEESCC--------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEE
T ss_pred CceEEECCCCCcceEEEEEE--CCcEEEEEeCCch--------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEE
Confidence 44567789999999999985 5789999987542 2577899999988653 356778777654 678999
Q ss_pred EecCCCCcHH
Q 001869 748 TDYCPGGELF 757 (1002)
Q Consensus 748 ~E~~~ggsL~ 757 (1002)
|||++|.+|.
T Consensus 113 ~e~l~G~~l~ 122 (362)
T 3ovc_A 113 SRRAQGVTLQ 122 (362)
T ss_dssp EECCCSEETT
T ss_pred EEecCCCCcc
Confidence 9999886653
No 386
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.97 E-value=1.5e-05 Score=91.02 Aligned_cols=80 Identities=15% Similarity=0.140 Sum_probs=50.9
Q ss_pred cccccccCCcEEEEEEEEcCCCeEEEEEEeecccc-cC---hhHHHHHHHHHHHHHhCCC--C-CcceEEEEEEeCCeEE
Q 001869 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-LN---RNKVHRACAEREILDMLDH--P-FVPALYASFQTKTHVC 745 (1002)
Q Consensus 673 i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~-~~---~~~~~~~~~E~~il~~l~h--p-nIv~l~~~~~~~~~~~ 745 (1002)
.++.||.|.++.||++....+++.+++|....... .. .....++..|..+++.+.. + .++.++.+ +.+..+
T Consensus 34 ~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~ 111 (397)
T 2olc_A 34 TCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAV 111 (397)
T ss_dssp EEEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTE
T ss_pred EEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccE
Confidence 35679999999999997655678899998654211 00 0123456778888887732 3 45566643 344568
Q ss_pred EEEecCCCC
Q 001869 746 LITDYCPGG 754 (1002)
Q Consensus 746 lV~E~~~gg 754 (1002)
+||||+.|.
T Consensus 112 lvmE~l~g~ 120 (397)
T 2olc_A 112 TVMEDLSHL 120 (397)
T ss_dssp EEECCCTTS
T ss_pred EEEEeCCCc
Confidence 999999764
No 387
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.86 E-value=2.3e-05 Score=85.41 Aligned_cols=77 Identities=19% Similarity=0.102 Sum_probs=58.4
Q ss_pred ccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCC---CcceEEEEEEeCCeEEEEE
Q 001869 672 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHP---FVPALYASFQTKTHVCLIT 748 (1002)
Q Consensus 672 ~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp---nIv~l~~~~~~~~~~~lV~ 748 (1002)
.-.+.|+.|.++.||++.. .+|+.+++|+..... ......+..|...|+.|.+. .+++++.+. ..++||
T Consensus 18 ~~~~~l~gG~~n~vy~v~~-~dG~~~vvK~~~~~~---~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvm 89 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDA---PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAM 89 (288)
T ss_dssp EEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTC---CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEE
T ss_pred cceeeeCCcchhheEEEEe-CCCCeEEEEecCCCC---cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEE
Confidence 3467799999999999986 468889999865321 11234678899999999764 578888763 368999
Q ss_pred ecCCCCcH
Q 001869 749 DYCPGGEL 756 (1002)
Q Consensus 749 E~~~ggsL 756 (1002)
||++|+++
T Consensus 90 e~l~g~~~ 97 (288)
T 3d1u_A 90 EWVDERPP 97 (288)
T ss_dssp ECCCCCCC
T ss_pred EecccCCC
Confidence 99998864
No 388
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.85 E-value=4.3e-05 Score=85.84 Aligned_cols=85 Identities=12% Similarity=0.020 Sum_probs=56.4
Q ss_pred ccccc-ccCCcEEEEEEEEc--C----CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-C--CCcceEEEEEEeC-
Q 001869 673 PIKPL-GSGDTGSVHLVELC--G----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-H--PFVPALYASFQTK- 741 (1002)
Q Consensus 673 i~~~L-G~G~~g~Vy~a~~~--~----~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-h--pnIv~l~~~~~~~- 741 (1002)
.++.| +.|..+.+|++... . ++..+++|+..............+..|..+++.|. + -.+++++.+..+.
T Consensus 24 ~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~ 103 (357)
T 3ats_A 24 VESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD 103 (357)
T ss_dssp EEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST
T ss_pred EEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC
Confidence 34677 88999999998763 1 26689999865432000000134667888888773 2 4577888877655
Q ss_pred --CeEEEEEecCCCCcHH
Q 001869 742 --THVCLITDYCPGGELF 757 (1002)
Q Consensus 742 --~~~~lV~E~~~ggsL~ 757 (1002)
+..|+||||++|..+.
T Consensus 104 ~~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 104 VLGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TTSSCEEEEECCCCBCCC
T ss_pred ccCCceEEEEecCCCChh
Confidence 3568999999886653
No 389
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.82 E-value=0.00014 Score=80.86 Aligned_cols=138 Identities=14% Similarity=0.140 Sum_probs=78.8
Q ss_pred ccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC--CCCcceEEE------EEEeCCeEE
Q 001869 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD--HPFVPALYA------SFQTKTHVC 745 (1002)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~--hpnIv~l~~------~~~~~~~~~ 745 (1002)
++.|+.|..+.||++.. .+..+++|+.... . ..+..|..+++.|. .-.++.++. +....+..+
T Consensus 37 ~~~l~gG~~n~~~~v~~--~~~~~vlk~~~~~----~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~ 107 (346)
T 2q83_A 37 IDVIQGNQMALVWKVHT--DSGAVCLKRIHRP----E---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLF 107 (346)
T ss_dssp EEECC----CEEEEEEE--TTEEEEEEEECSC----H---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEE
T ss_pred eeeccccccCcEEEEEe--CCCCEEEEecCCC----H---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEE
Confidence 35567778899999986 3345999988752 1 23334555555442 113344433 123467789
Q ss_pred EEEecCCCCcHH-----------H---HHhh--CCCC-C--------C-CHH--------H-------------------
Q 001869 746 LITDYCPGGELF-----------L---LLDR--QPTK-V--------L-KED--------A------------------- 772 (1002)
Q Consensus 746 lV~E~~~ggsL~-----------~---~l~~--~~~~-~--------l-~~~--------~------------------- 772 (1002)
+||+|++|.++. . .++. .... . + ... .
T Consensus 108 ~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 187 (346)
T 2q83_A 108 VVYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQL 187 (346)
T ss_dssp EEEECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHH
T ss_pred EEEEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHH
Confidence 999999886431 1 1111 1000 0 0 000 0
Q ss_pred ----HHHHHHHHHHHHHHHHH-------------cCcccCCCCCCCEEEccCCcEEEEeccCCcc
Q 001869 773 ----VRFYAAEVVVALEYLHC-------------QGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 773 ----i~~i~~qil~aL~yLH~-------------~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
+..+..++..++.+|+. ..++|+|++|.|||++.++.+.|+||+.+..
T Consensus 188 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 188 YLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 11122234445666653 4799999999999998888999999998743
No 390
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.47 E-value=0.00052 Score=75.38 Aligned_cols=76 Identities=20% Similarity=0.173 Sum_probs=60.8
Q ss_pred cccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC---CCCcceEEEEEEeCCeEEEEEe
Q 001869 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD---HPFVPALYASFQTKTHVCLITD 749 (1002)
Q Consensus 673 i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~---hpnIv~l~~~~~~~~~~~lV~E 749 (1002)
-++.|+.|....+|++.. ++..+++|+.... ....+..|...|+.|. ...+++++.+....+..|+|||
T Consensus 40 ~~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme 111 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND--EVQTVFVKINERS------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLE 111 (312)
T ss_dssp EEEEECCSSSSEEEEEES--SSCEEEEEEEEGG------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEE
T ss_pred eeEEeCCccceeeeEEEE--CCCeEEEEeCCcc------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEE
Confidence 356789999999999985 4678899987643 2456788988888883 3678899998888888999999
Q ss_pred cCCCCcH
Q 001869 750 YCPGGEL 756 (1002)
Q Consensus 750 ~~~ggsL 756 (1002)
|++|..+
T Consensus 112 ~l~G~~~ 118 (312)
T 3jr1_A 112 ALNKSKN 118 (312)
T ss_dssp CCCCCCC
T ss_pred eccCCCC
Confidence 9998754
No 391
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.34 E-value=0.00068 Score=77.89 Aligned_cols=77 Identities=25% Similarity=0.266 Sum_probs=46.3
Q ss_pred cccccccCCcEEEEEEEEcCCCeEEEEEEeecccc-cChh---HHHHHHHHHHHHHh---CCCCCcceEEEEEEeCCeEE
Q 001869 673 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-LNRN---KVHRACAEREILDM---LDHPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 673 i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~-~~~~---~~~~~~~E~~il~~---l~hpnIv~l~~~~~~~~~~~ 745 (1002)
-++.||.|..+.||++.. +++.++||....... .... ...+...|.+++.. .....+++++.+. .+..+
T Consensus 38 ~i~~l~~G~~n~vyrv~~--~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~ 113 (420)
T 2pyw_A 38 VIKEVGDGNLNFVFIVVG--SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMAL 113 (420)
T ss_dssp EEEECCCSSSCEEEEEEC--SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTE
T ss_pred EEEEccCCCcEEEEEEEc--CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccE
Confidence 356789999999999964 567899995432111 0100 00122223333332 2345677787765 46679
Q ss_pred EEEecC-CC
Q 001869 746 LITDYC-PG 753 (1002)
Q Consensus 746 lV~E~~-~g 753 (1002)
+||||+ +|
T Consensus 114 lv~e~l~~g 122 (420)
T 2pyw_A 114 IGMRYLEPP 122 (420)
T ss_dssp EEECCCCTT
T ss_pred EEEeecCCc
Confidence 999999 77
No 392
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.17 E-value=0.00057 Score=74.68 Aligned_cols=134 Identities=15% Similarity=0.067 Sum_probs=75.0
Q ss_pred ccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCc-ceEEEEEEeCCeEEEEEecC-
Q 001869 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFV-PALYASFQTKTHVCLITDYC- 751 (1002)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnI-v~l~~~~~~~~~~~lV~E~~- 751 (1002)
++.|+.|....+|++ ..+++|+...... .......|..+++.+....+ ++++.+. .+.-++|+||+
T Consensus 23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~~----~~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~ 90 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA------GDLCLRIPGKGTE----EYINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIA 90 (301)
T ss_dssp CEEEESCSSEEEEEE------TTEEEEEECC--------CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCT
T ss_pred eeEcCCcccccccee------eeEEEECCCCCcc----ceeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecC
Confidence 788999999999999 4589998765311 11122457777776642222 5666543 33347899999
Q ss_pred CCCcHHHH---------------Hhh--CCCCCC----C-HHHHHHHHHH--------------HHHHHHHHH----H--
Q 001869 752 PGGELFLL---------------LDR--QPTKVL----K-EDAVRFYAAE--------------VVVALEYLH----C-- 789 (1002)
Q Consensus 752 ~ggsL~~~---------------l~~--~~~~~l----~-~~~i~~i~~q--------------il~aL~yLH----~-- 789 (1002)
+|.+|... +.+ .....+ . ...+..+... +...+..|. .
T Consensus 91 ~g~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~ 170 (301)
T 3dxq_A 91 GAQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHP 170 (301)
T ss_dssp TCEECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSC
T ss_pred CCccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcC
Confidence 66554310 110 000001 0 1111111111 111111111 1
Q ss_pred --cCcccCCCCCCCEEEccCCcEEEEeccCCcc
Q 001869 790 --QGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 790 --~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
..++|+|+.|.||+ ..++.+.|+||..+..
T Consensus 171 ~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 171 LPLAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp CCCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred CCceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 13899999999999 5567889999998854
No 393
>1oj5_A Steroid receptor coactivator 1A; transcriptional coactivator, complex, LXXLL motif, transcriptional regulation; 2.2A {Mus musculus} SCOP: d.110.3.8
Probab=97.04 E-value=0.00046 Score=64.27 Aligned_cols=96 Identities=8% Similarity=-0.004 Sum_probs=75.4
Q ss_pred CCCCCcEEEcchHHHHHcCCCh--hHHcCCCCCcCCCCCCCh--HHHHHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEe
Q 001869 208 TKPDYPIMYASAGFFKMTGYTS--KEVVGRNCRFLQGAGTDP--EDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTI 283 (1002)
Q Consensus 208 ~~~dG~I~~~N~a~~~l~Gys~--eEliG~~~~~l~~~~~~~--~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~ 283 (1002)
.+.||+|+++..+.. ..+|.+ +|++|+.+..++|+++.. ...+.+..++..|...+.-++++.|+|..+|++...
T Consensus 13 h~~dGKf~~vDq~~~-r~~~~~g~qdLlGrsiy~f~H~~D~~~s~l~~h~~~vl~~Gq~~S~~YRfr~k~g~~V~~qT~s 91 (132)
T 1oj5_A 13 QDTTGKIISIDTSSL-RAAGRTGWEDLVRKCIYAFFQPQGREPSYARQLFQEVMTRGTASSPSYRFILNDGTMLSAHTRC 91 (132)
T ss_dssp ECTTCCEEEEECHHH-HTTCCSCHHHHHHHHHHHHTSCBTTBCCHHHHHHHHHHHHSEEECCCEEEECTTSCEEEEEEEE
T ss_pred ecCCCcEEEEecccc-cccccccHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHcCCccccceEEEecCCcEEEEEEEE
Confidence 445999999999987 478888 999999999888888854 778888889988888888899999999999999988
Q ss_pred eeeecCC-CCEEEEEEEEeccc
Q 001869 284 APIKDDE-GKVLKFIGMQVEVS 304 (1002)
Q Consensus 284 ~pi~d~~-G~v~~~v~~~~DIT 304 (1002)
..+++.. +++.++|++-.=+.
T Consensus 92 k~f~np~t~e~e~Ivs~n~v~r 113 (132)
T 1oj5_A 92 KLCYPQSPDMQPFIMGIHIIDR 113 (132)
T ss_dssp EEECC----CCCEEEEEEEEEC
T ss_pred EEecCCCCCCCCEEEEEEEEEc
Confidence 8887742 34445555544343
No 394
>1oj5_A Steroid receptor coactivator 1A; transcriptional coactivator, complex, LXXLL motif, transcriptional regulation; 2.2A {Mus musculus} SCOP: d.110.3.8
Probab=96.95 E-value=0.00074 Score=62.87 Aligned_cols=104 Identities=13% Similarity=0.106 Sum_probs=81.4
Q ss_pred cccEEEEcCCCCCCCEEecCHHHHHHcCCCh--hhhcCCCCccccCCCCCH--HHHHHHHHHHhcCCcEEEEEEEEecCC
Q 001869 482 EKNFVITDPRLPDNPIIFASDSFLELTEYSR--EEILGRNCRFLQGPETDP--ATVRKIRAAIDNQTDVTVQLINYTKSG 557 (1002)
Q Consensus 482 ~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~--eEliGk~~~~l~~~~~~~--~~~~~l~~~l~~~~~~~~e~~~~~kdG 557 (1002)
..-+.-.|.+|+ |++|.....+ .+|.. +||+|+.+.++.|+++.. ...+.+.+.+..|.....-+|++.|+|
T Consensus 7 e~F~sRh~~dGK---f~~vDq~~~r-~~~~~g~qdLlGrsiy~f~H~~D~~~s~l~~h~~~vl~~Gq~~S~~YRfr~k~g 82 (132)
T 1oj5_A 7 ESFMTKQDTTGK---IISIDTSSLR-AAGRTGWEDLVRKCIYAFFQPQGREPSYARQLFQEVMTRGTASSPSYRFILNDG 82 (132)
T ss_dssp CEEEEEECTTCC---EEEEECHHHH-TTCCSCHHHHHHHHHHHHTSCBTTBCCHHHHHHHHHHHHSEEECCCEEEECTTS
T ss_pred eeeEEeecCCCc---EEEEeccccc-ccccccHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHcCCccccceEEEecCC
Confidence 445667788788 9999998874 77888 999999999999999865 778888888888887888899999999
Q ss_pred CEEEEEEEEEeeeCC-CCCEEEEEEEEecCCcc
Q 001869 558 NKFWNLFHLQPMRDQ-KGEVQYFIGVQLDGSEH 589 (1002)
Q Consensus 558 ~~~wv~~~~~pi~d~-~G~v~~~vgi~~DITer 589 (1002)
..+|+......+++. ..++.+++++-.=|.+.
T Consensus 83 ~~V~~qT~sk~f~np~t~e~e~Ivs~n~v~r~~ 115 (132)
T 1oj5_A 83 TMLSAHTRCKLCYPQSPDMQPFIMGIHIIDREH 115 (132)
T ss_dssp CEEEEEEEEEEECC----CCCEEEEEEEEECC-
T ss_pred cEEEEEEEEEEecCCCCCCCCEEEEEEEEEcCC
Confidence 999999998888875 34455566654444443
No 395
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.83 E-value=0.0024 Score=70.72 Aligned_cols=137 Identities=13% Similarity=0.158 Sum_probs=72.0
Q ss_pred cccccCCcEE-EEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC--CCCcceEEEEEEeCCeEEEEEecC
Q 001869 675 KPLGSGDTGS-VHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD--HPFVPALYASFQTKTHVCLITDYC 751 (1002)
Q Consensus 675 ~~LG~G~~g~-Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~--hpnIv~l~~~~~~~~~~~lV~E~~ 751 (1002)
+.|+.|+... +|++.. .++..+++|....... ..+..|..+++.+. .-.+++++.+....+ ++|||++
T Consensus 24 ~~l~gg~s~~~~~r~~~-~~~~~~vlk~~~~~~~------~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l 94 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRS-PTGAKAVLMDWSPEEG------GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDL 94 (333)
T ss_dssp CC--------CCEEEEC-TTCCEEEEEECCTTTT------CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCC
T ss_pred eECCCCCCCceEEEEEc-CCCCeEEEEECCCCCC------ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeC
Confidence 4566665554 667653 2356778886543210 22344666666663 234567776533333 7899999
Q ss_pred CCCcHHHHHhhC---------------------C---CCCCCHHHHHH--------HH------------HHHHHHHHHH
Q 001869 752 PGGELFLLLDRQ---------------------P---TKVLKEDAVRF--------YA------------AEVVVALEYL 787 (1002)
Q Consensus 752 ~ggsL~~~l~~~---------------------~---~~~l~~~~i~~--------i~------------~qil~aL~yL 787 (1002)
.+..+.+.+... . ...+....... +. ..+...+..|
T Consensus 95 ~~~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l 174 (333)
T 3csv_A 95 GDALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQI 174 (333)
T ss_dssp CSCBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHH
T ss_pred CCcchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 776765443211 0 01122211110 00 0111223333
Q ss_pred H------HcCcccCCCCCCCEEEccC----CcEEEEeccCCcc
Q 001869 788 H------CQGIIYRDLKPENVLLQGN----GHVSLTDFDLSCL 820 (1002)
Q Consensus 788 H------~~gIiHrDLKP~NILl~~~----g~vkL~DFG~a~~ 820 (1002)
. ...++|+|+.|.|||++.+ +.+.|+||+.+..
T Consensus 175 ~~~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 175 LSAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp HHHHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred HHhcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1 2369999999999999874 6899999998854
No 396
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.83 E-value=0.002 Score=74.19 Aligned_cols=74 Identities=20% Similarity=0.321 Sum_probs=50.2
Q ss_pred ccccccCCcEEEEEEEEcC-------CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCC-CcceEEEEEEeCCeEE
Q 001869 674 IKPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHP-FVPALYASFQTKTHVC 745 (1002)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~~-------~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp-nIv~l~~~~~~~~~~~ 745 (1002)
++.|+.|....||++.... .+..+++|+.... . ....+..|..+++.|... -.+++++.+.+ .
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~---~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g 148 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP---E--TESHLVAESVIFTLLSERHLGPKLYGIFSG----G 148 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC---C--CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----E
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC---C--cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----C
Confidence 5678899999999998743 2578999988431 1 113445688888887433 34677766543 3
Q ss_pred EEEecCCCCcH
Q 001869 746 LITDYCPGGEL 756 (1002)
Q Consensus 746 lV~E~~~ggsL 756 (1002)
+|+||++|.+|
T Consensus 149 ~v~e~l~G~~l 159 (429)
T 1nw1_A 149 RLEEYIPSRPL 159 (429)
T ss_dssp EEECCCCEEEC
T ss_pred EEEEEeCCccc
Confidence 89999986443
No 397
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.81 E-value=0.0088 Score=61.02 Aligned_cols=122 Identities=16% Similarity=0.097 Sum_probs=79.2
Q ss_pred CcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCcccCCCCCCCEEEccCCcEEEEeccCCcccCCCCCCCCCcc
Q 001869 754 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 832 (1002)
Q Consensus 754 gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 832 (1002)
-+|.++|+.. +.+++++++|.++.|.+.+|.-+-. +.-..+=+.|..|++..+|.|-+.+ +.+.
T Consensus 33 vSL~eIL~~~-~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------- 97 (229)
T 2yle_A 33 LSLEEILRLY-NQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD------------- 97 (229)
T ss_dssp EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred ccHHHHHHHc-CCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc-------------
Confidence 4799999865 4679999999999999999877622 2222334456899999999887664 2110
Q ss_pred hhhhhcccCCCCCccccccCcccccccCCCcccccccccCCCCCChhhHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHH
Q 001869 833 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANIL 911 (1002)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~~~~sDIwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~ 911 (1002)
.....|.+||.+. ...+.+.=|||||+++|..+- |-.+-
T Consensus 98 --------------------------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~------------- 137 (229)
T 2yle_A 98 --------------------------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKEN------------- 137 (229)
T ss_dssp -----------------------------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTT-------------
T ss_pred --------------------------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCcc-------------
Confidence 0122466787763 334568899999999999984 32221
Q ss_pred hCCCCCCCCCCCCHHHHHHHHHcccc
Q 001869 912 HKDLKFPSSTPTSLHAKQLMYRLLHR 937 (1002)
Q Consensus 912 ~~~~~~~~~~~~s~~~~~Ll~~~L~~ 937 (1002)
....+|+.+-+||..|..-
T Consensus 138 -------eE~eLS~~LE~LL~~Mt~~ 156 (229)
T 2yle_A 138 -------EERELSPPLEQLIDHMANT 156 (229)
T ss_dssp -------EEECCCHHHHHHHHHHTTC
T ss_pred -------cchhhCHHHHHHHHHHHhc
Confidence 1223677888888888755
No 398
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.80 E-value=0.0033 Score=69.13 Aligned_cols=142 Identities=19% Similarity=0.227 Sum_probs=78.9
Q ss_pred ccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCC--CCcceEEEE------EEeCCe
Q 001869 672 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH--PFVPALYAS------FQTKTH 743 (1002)
Q Consensus 672 ~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h--pnIv~l~~~------~~~~~~ 743 (1002)
.-++.|+.|....+|++... ++ .+++|+..... ....+..|..+++.|.. -.+++++.. ....+.
T Consensus 25 ~~~~~i~~G~~n~~~~v~~~-~g-~~vlk~~~~~~-----~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~ 97 (322)
T 2ppq_A 25 TSYKGIAEGVENSNFLLHTT-KD-PLILTLYEKRV-----EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGR 97 (322)
T ss_dssp EEEEEECC---EEEEEEEES-SC-CEEEEEECC--------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTE
T ss_pred eEeeccCCCcccceEEEEeC-Cc-cEEEEEeCCCC-----CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCE
Confidence 34567888999999999863 33 68899886521 11234557777766631 113333321 123466
Q ss_pred EEEEEecCCCCcHHH-----------H---HhhC--C--CC---CCCHHHHHH---------------HHHHHHHHHHHH
Q 001869 744 VCLITDYCPGGELFL-----------L---LDRQ--P--TK---VLKEDAVRF---------------YAAEVVVALEYL 787 (1002)
Q Consensus 744 ~~lV~E~~~ggsL~~-----------~---l~~~--~--~~---~l~~~~i~~---------------i~~qil~aL~yL 787 (1002)
.++||+|++|..+.. . ++.. . .. ......-.. +...+...++++
T Consensus 98 ~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l 177 (322)
T 2ppq_A 98 PAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYL 177 (322)
T ss_dssp EEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHH
T ss_pred EEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHH
Confidence 799999998864310 0 1110 0 00 011110000 001134455566
Q ss_pred HH-------cCcccCCCCCCCEEEccCCcEEEEeccCCcc
Q 001869 788 HC-------QGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 788 H~-------~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
+. .+++|+|++|.|||++.++.+.|+||+.+..
T Consensus 178 ~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 178 AAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp HHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 53 3699999999999999776668999998743
No 399
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.76 E-value=0.0023 Score=72.14 Aligned_cols=139 Identities=19% Similarity=0.257 Sum_probs=84.2
Q ss_pred ccccccCCcEEEEEEEEcC-------CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEE
Q 001869 674 IKPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~~-------~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~ 745 (1002)
++.|..|-...+|++.... +++.|++|+.... ......+.+|..+++.|. +.-.+++++++.+ .
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~----~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g 126 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI----LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----G 126 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----E
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc----cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----c
Confidence 4567888899999998742 3578999986331 112345568999988874 3334677766544 2
Q ss_pred EEEecCCCCcHHH--------------HHhh---C--C-CCCC--CHHHHHHHHHHHHH-------------------HH
Q 001869 746 LITDYCPGGELFL--------------LLDR---Q--P-TKVL--KEDAVRFYAAEVVV-------------------AL 784 (1002)
Q Consensus 746 lV~E~~~ggsL~~--------------~l~~---~--~-~~~l--~~~~i~~i~~qil~-------------------aL 784 (1002)
+||||++|.+|.. .+.+ . . .... -..++..+..++.. .+
T Consensus 127 ~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~ 206 (379)
T 3feg_A 127 RLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEM 206 (379)
T ss_dssp EEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHH
T ss_pred cEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHH
Confidence 8999998865431 1111 1 0 1111 13556666554422 23
Q ss_pred HHHHH--------cCcccCCCCCCCEEEccC----CcEEEEeccCCcc
Q 001869 785 EYLHC--------QGIIYRDLKPENVLLQGN----GHVSLTDFDLSCL 820 (1002)
Q Consensus 785 ~yLH~--------~gIiHrDLKP~NILl~~~----g~vkL~DFG~a~~ 820 (1002)
..|.. ..++|+|+.+.|||++.+ +.+.|+||..+..
T Consensus 207 ~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 207 GNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 33332 259999999999999876 7899999999843
No 400
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=96.72 E-value=0.0044 Score=67.06 Aligned_cols=79 Identities=19% Similarity=0.117 Sum_probs=55.5
Q ss_pred CCcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCC---CCcceEEEEEEeCCeEE
Q 001869 669 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH---PFVPALYASFQTKTHVC 745 (1002)
Q Consensus 669 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h---pnIv~l~~~~~~~~~~~ 745 (1002)
....-++.+|.|..+.||++.. .+|+.|++|+..... ......+..|...|+.|.. --+++++.+. .-+
T Consensus 15 ~~v~~v~~~g~G~~~~vyrv~l-~DG~~~~vK~~~~~~---~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~ 86 (288)
T 3f7w_A 15 REVAAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDA---PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRT 86 (288)
T ss_dssp CCEEEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTC---CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTE
T ss_pred CCeEEEEecCCCCCeEEEEEEE-CCCCEEEEEEeCCCC---cchhhHHHHHHHHHHHHHhhCCCCcceEEecc----Cce
Confidence 3456678899999999999986 578899999865432 1122356779999988842 2355666542 237
Q ss_pred EEEecCCCCc
Q 001869 746 LITDYCPGGE 755 (1002)
Q Consensus 746 lV~E~~~ggs 755 (1002)
+||||+.++.
T Consensus 87 lv~e~l~~~~ 96 (288)
T 3f7w_A 87 LAMEWVDERP 96 (288)
T ss_dssp EEEECCCCCC
T ss_pred EEEEeecccC
Confidence 8999997654
No 401
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.57 E-value=0.0034 Score=70.62 Aligned_cols=75 Identities=21% Similarity=0.232 Sum_probs=45.0
Q ss_pred ccccccCCcEEEEEEEEcC--------CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCC-cceEEEEEEeCCeE
Q 001869 674 IKPLGSGDTGSVHLVELCG--------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF-VPALYASFQTKTHV 744 (1002)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~~--------~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpn-Iv~l~~~~~~~~~~ 744 (1002)
++.|+.|....+|++.... .+..+++|+...... .......|..+++.+...+ +++++..+ .+
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~----~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~~-- 109 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD----ELYNTISEFEVYKTMSKYKIAPQLLNTF--NG-- 109 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG----GTSCHHHHHHHHHHHHHTTSSCCEEEEE--TT--
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc----ceecHHHHHHHHHHHHhcCCCCceEEec--CC--
Confidence 4567888899999998743 136899998764311 1112356788887774223 55776554 22
Q ss_pred EEEEecCCCCcH
Q 001869 745 CLITDYCPGGEL 756 (1002)
Q Consensus 745 ~lV~E~~~ggsL 756 (1002)
++||||++|.++
T Consensus 110 ~~v~e~i~G~~l 121 (369)
T 3c5i_A 110 GRIEEWLYGDPL 121 (369)
T ss_dssp EEEEECCCSEEC
T ss_pred cEEEEEecCCcC
Confidence 689999987543
No 402
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.52 E-value=0.0098 Score=65.44 Aligned_cols=138 Identities=13% Similarity=0.043 Sum_probs=78.0
Q ss_pred cccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCC--CCcceEEEE-----EEeCCeEEEE
Q 001869 675 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH--PFVPALYAS-----FQTKTHVCLI 747 (1002)
Q Consensus 675 ~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h--pnIv~l~~~-----~~~~~~~~lV 747 (1002)
..|+ |....||++.. .+|+.+++|....... ....+..|..+++.|.. -.++.++.. ....+..++|
T Consensus 32 ~~l~-g~~n~~y~v~~-~~g~~~vlK~~~~~~~----~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l 105 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQD-EDRRRFVVKFYRPERW----TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAV 105 (328)
T ss_dssp EEEC-CSSSEEEEECC-TTCCCEEEEEECTTTS----CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEE
T ss_pred Eeec-CcccceEEEEc-CCCCEEEEEEcCCCCC----CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEE
Confidence 4566 88889998865 3466799999864311 23455667777777632 124444432 2234567899
Q ss_pred EecCCCCcHH-----H------H---Hhh----CC---CCCCCHHHH----HHHH--------------H-HHHHHHHHH
Q 001869 748 TDYCPGGELF-----L------L---LDR----QP---TKVLKEDAV----RFYA--------------A-EVVVALEYL 787 (1002)
Q Consensus 748 ~E~~~ggsL~-----~------~---l~~----~~---~~~l~~~~i----~~i~--------------~-qil~aL~yL 787 (1002)
|+|++|..+. . . ++. .. ...++.... ..++ . .+-..++.+
T Consensus 106 ~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 185 (328)
T 1zyl_A 106 FPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAV 185 (328)
T ss_dssp EECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHH
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHH
Confidence 9999875431 1 1 110 00 011121111 0010 0 111122333
Q ss_pred H-------HcCcccCCCCCCCEEEccCCcEEEEeccCCcc
Q 001869 788 H-------CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 788 H-------~~gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
. ...++|+|++|.|||++ + .+.|+||+.+..
T Consensus 186 ~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 186 TAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp HHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 2 23589999999999999 4 899999998743
No 403
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.48 E-value=0.015 Score=67.34 Aligned_cols=75 Identities=15% Similarity=0.158 Sum_probs=49.1
Q ss_pred ccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCc-ceEEEEEEeCCeEEEEEecCC
Q 001869 674 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFV-PALYASFQTKTHVCLITDYCP 752 (1002)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnI-v~l~~~~~~~~~~~lV~E~~~ 752 (1002)
++.|+.|-...+|++.....+..|++|+...... . . -....|..+++.|...++ +++++++. + .+||||++
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~-~--~-idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~ 184 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTD-E--I-INREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMD 184 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CC-S--C-SCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChh-h--h-cCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeC
Confidence 4678899999999999855458899998754311 1 0 112468889988864444 67777663 2 35999998
Q ss_pred CCcH
Q 001869 753 GGEL 756 (1002)
Q Consensus 753 ggsL 756 (1002)
|.+|
T Consensus 185 G~~l 188 (458)
T 2qg7_A 185 GYAL 188 (458)
T ss_dssp SEEC
T ss_pred CccC
Confidence 7544
No 404
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.39 E-value=0.013 Score=65.17 Aligned_cols=30 Identities=23% Similarity=0.368 Sum_probs=27.2
Q ss_pred CcccCCCCCCCEEEccCCcEEEEeccCCcc
Q 001869 791 GIIYRDLKPENVLLQGNGHVSLTDFDLSCL 820 (1002)
Q Consensus 791 gIiHrDLKP~NILl~~~g~vkL~DFG~a~~ 820 (1002)
.++|+|+.|.||+++.++.+.|+||+.+..
T Consensus 207 ~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 207 VLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp EEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred eeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 599999999999999888899999998754
No 405
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.09 E-value=0.016 Score=65.61 Aligned_cols=142 Identities=19% Similarity=0.259 Sum_probs=84.2
Q ss_pred ccccccCCcEEEEEEEEcC-------CCeEEEEEEeeccccc-----------Chh----HHHHHHHHHHHHHhCC-CCC
Q 001869 674 IKPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGVML-----------NRN----KVHRACAEREILDMLD-HPF 730 (1002)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~~-------~~~~vaiK~~~~~~~~-----------~~~----~~~~~~~E~~il~~l~-hpn 730 (1002)
++.|..|-...+|++.... .+..|++++.-..... ++. ....+..|..+++.+. +--
T Consensus 57 v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi 136 (401)
T 3f2s_A 57 ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSL 136 (401)
T ss_dssp EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTS
T ss_pred EEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCC
Confidence 4567779999999998743 2478999987653210 000 0112335888888874 444
Q ss_pred cceEEEEEEeCCeEEEEEecCCCCcHHH--------------HHhh--CC----CCCCC--HHHHHHHHHHHH-------
Q 001869 731 VPALYASFQTKTHVCLITDYCPGGELFL--------------LLDR--QP----TKVLK--EDAVRFYAAEVV------- 781 (1002)
Q Consensus 731 Iv~l~~~~~~~~~~~lV~E~~~ggsL~~--------------~l~~--~~----~~~l~--~~~i~~i~~qil------- 781 (1002)
.+++++++.++ +|+||++|.+|.. .+.+ .. ..... ...+..+..++.
T Consensus 137 ~Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~ 212 (401)
T 3f2s_A 137 GPKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEE 212 (401)
T ss_dssp SCCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSH
T ss_pred CCeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcch
Confidence 66777776532 8999998755421 1111 00 11111 234444443332
Q ss_pred ---------------HHHHH----HHHc----CcccCCCCCCCEEEccC------CcEEEEeccCCc
Q 001869 782 ---------------VALEY----LHCQ----GIIYRDLKPENVLLQGN------GHVSLTDFDLSC 819 (1002)
Q Consensus 782 ---------------~aL~y----LH~~----gIiHrDLKP~NILl~~~------g~vkL~DFG~a~ 819 (1002)
.-+.. |... .++|+|+.+.|||++.+ +.+.|+||..|.
T Consensus 213 ~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 213 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 11222 2222 58999999999999876 789999999884
No 406
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.10 E-value=0.027 Score=64.37 Aligned_cols=75 Identities=21% Similarity=0.319 Sum_probs=48.8
Q ss_pred ccccccCCcEEEEEEEEcCC-------CeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEE
Q 001869 674 IKPLGSGDTGSVHLVELCGS-------GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVC 745 (1002)
Q Consensus 674 ~~~LG~G~~g~Vy~a~~~~~-------~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~ 745 (1002)
++.|..|-...+|++..... +..|++|+..... ...-...+|..+++.+. +.-.+++++.+ .+ +
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t----~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~~--~ 146 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV----GKFYDSKVELDVFRYLSNINIAPNIIADF--PE--G 146 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-----CCCCHHHHHHHHHHHHHTTSSCCEEEEE--TT--E
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc----chhcCHHHHHHHHHHHHhcCCCCCEEEEc--CC--C
Confidence 45678888999999987521 5789999865431 11112345888887774 33356666533 22 7
Q ss_pred EEEecCCCCcH
Q 001869 746 LITDYCPGGEL 756 (1002)
Q Consensus 746 lV~E~~~ggsL 756 (1002)
+||||++|.+|
T Consensus 147 ~I~efI~G~~l 157 (424)
T 3mes_A 147 RIEEFIDGEPL 157 (424)
T ss_dssp EEEECCCSEEC
T ss_pred EEEEEeCCccC
Confidence 89999998654
No 407
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=92.61 E-value=0.3 Score=55.27 Aligned_cols=29 Identities=28% Similarity=0.401 Sum_probs=24.9
Q ss_pred cccCCCCCCCEEEc------cCCcEEEEeccCCcc
Q 001869 792 IIYRDLKPENVLLQ------GNGHVSLTDFDLSCL 820 (1002)
Q Consensus 792 IiHrDLKP~NILl~------~~g~vkL~DFG~a~~ 820 (1002)
++|+|+.+.|||+. .++.+.++||.+|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 67999999999993 456799999999853
No 408
>2ool_A Sensor protein; bacteriophytochrome, photoconversion, photoreceptor, biliver signaling protein; HET: LBV; 2.20A {Rhodopseudomonas palustris} SCOP: d.110.2.1 d.110.3.9
Probab=88.33 E-value=1.3 Score=48.53 Aligned_cols=77 Identities=13% Similarity=0.140 Sum_probs=49.7
Q ss_pred cEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCc---EEEEEEEEec-CCCE
Q 001869 484 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD---VTVQLINYTK-SGNK 559 (1002)
Q Consensus 484 ~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~---~~~e~~~~~k-dG~~ 559 (1002)
..+++|.. +++|+.+|..+++++|+++++++|++...+.+++. ...+...+..+.. ...+++.... +|..
T Consensus 44 ~Ll~~~~~--~~~i~~~S~N~~~~lg~~~~~llG~~l~~ll~~~~----~~~l~~~l~~~~~~~~~p~~~~~~~~~~~~~ 117 (337)
T 2ool_A 44 YLFVVSET--DLRIASVSANVEDLLRQPPASLLNVPIAHYLTAAS----AARLTHALHGGDPAAINPIRLDVVTPDGERA 117 (337)
T ss_dssp EEEEECTT--TCBEEEEETTHHHHHSSCGGGGTTCBGGGGBCHHH----HHHHHHHHCC----CCCSEEEEEEETTEEEE
T ss_pred EEEEEECC--CCEEEEEehhHHHHHCcCHHHHcCCCHHHHcCHHH----HHHHHHHHhcCCccccCcEEEEEeccCCCeE
Confidence 34456653 46699999999999999999999999888876643 3345555543321 2233444333 4666
Q ss_pred EEEEEEE
Q 001869 560 FWNLFHL 566 (1002)
Q Consensus 560 ~wv~~~~ 566 (1002)
+|+.++.
T Consensus 118 f~~~~Hr 124 (337)
T 2ool_A 118 FNGILHR 124 (337)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 7766553
No 409
>2ool_A Sensor protein; bacteriophytochrome, photoconversion, photoreceptor, biliver signaling protein; HET: LBV; 2.20A {Rhodopseudomonas palustris} SCOP: d.110.2.1 d.110.3.9
Probab=83.19 E-value=1.5 Score=48.07 Aligned_cols=77 Identities=17% Similarity=0.175 Sum_probs=48.8
Q ss_pred CcEE-EEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCc---EEEEEEEEec-CC
Q 001869 200 QTFV-VSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS---YCGRLLNYKK-DG 274 (1002)
Q Consensus 200 d~i~-v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~---~~~e~~~~~k-dG 274 (1002)
.|+. ++|. .+++|+.+|..+++++|+++++++|+++..+++++ ....++..+..+.. ...+++.... +|
T Consensus 42 ~G~Ll~~~~--~~~~i~~~S~N~~~~lg~~~~~llG~~l~~ll~~~----~~~~l~~~l~~~~~~~~~p~~~~~~~~~~~ 115 (337)
T 2ool_A 42 HGYLFVVSE--TDLRIASVSANVEDLLRQPPASLLNVPIAHYLTAA----SAARLTHALHGGDPAAINPIRLDVVTPDGE 115 (337)
T ss_dssp TSEEEEECT--TTCBEEEEETTHHHHHSSCGGGGTTCBGGGGBCHH----HHHHHHHHHCC----CCCSEEEEEEETTEE
T ss_pred CEEEEEEEC--CCCEEEEEehhHHHHHCcCHHHHcCCCHHHHcCHH----HHHHHHHHHhcCCccccCcEEEEEeccCCC
Confidence 3443 4453 36899999999999999999999999998877653 33445555544321 1123333333 35
Q ss_pred cEEEEEEE
Q 001869 275 TPFWNLLT 282 (1002)
Q Consensus 275 ~~~w~~~~ 282 (1002)
..||+.+.
T Consensus 116 ~~f~~~~H 123 (337)
T 2ool_A 116 RAFNGILH 123 (337)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEE
Confidence 66666544
No 410
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=80.78 E-value=3.8 Score=41.61 Aligned_cols=84 Identities=11% Similarity=0.069 Sum_probs=62.6
Q ss_pred CCCCcceEEEEEEeCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcccCCCCCCCEEEcc
Q 001869 727 DHPFVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG 806 (1002)
Q Consensus 727 ~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~ 806 (1002)
.||+++.. .+-.+.+.+.+.++.-..+.=+..++. ++....++++.+|+....++ ..=+|--|.|+||+++.
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik~-----~~~~eKlr~l~ni~~l~~~~--~~r~tf~L~P~NL~f~~ 114 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIKS-----FTKNEKLRYLLNIKNLEEVN--RTRYTFVLAPDELFFTR 114 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGGG-----SCHHHHHHHHHHGGGGGGGG--GSSEECCCSGGGEEECT
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHHHh-----cCHHHHHHHHHHHHHHHHHh--cCceEEEEecceEEEcC
Confidence 68988877 566777777777776543333333443 77888888888888877444 33467889999999999
Q ss_pred CCcEEEEeccCC
Q 001869 807 NGHVSLTDFDLS 818 (1002)
Q Consensus 807 ~g~vkL~DFG~a 818 (1002)
++.+++.-.|+-
T Consensus 115 ~~~p~i~~RGik 126 (215)
T 4ann_A 115 DGLPIAKTRGLQ 126 (215)
T ss_dssp TSCEEESCCEET
T ss_pred CCCEEEEEccCc
Confidence 999999988864
No 411
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=76.03 E-value=4.6 Score=41.12 Aligned_cols=83 Identities=10% Similarity=-0.010 Sum_probs=62.6
Q ss_pred CCCCcceEEEEEEeCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHH-HHHHcCcccCCCCCCCEEEc
Q 001869 727 DHPFVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALE-YLHCQGIIYRDLKPENVLLQ 805 (1002)
Q Consensus 727 ~hpnIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~-yLH~~gIiHrDLKP~NILl~ 805 (1002)
.||++ -..+-.+.+.+.+.++.-+++.=+..++. ++....++++.+|+.... ++ ..-+|--|.|+||+++
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~~-----~~~~eKlrll~nl~~L~~~~~--~~r~tf~l~P~NL~f~ 118 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIRK-----TTLLSRIRAAIHLVSKVKHHS--ARRLIFIVCPENLMFN 118 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHHT-----SCHHHHHHHHHHHHHHHSSCC--SSSEECCCCGGGEEEC
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHHh-----cCHHHHHHHHHHHHHHHHHhh--hCceeEEEeCceEEEe
Confidence 68888 44555778888888887655555555544 678888888887777655 33 3457788999999999
Q ss_pred cCCcEEEEeccCC
Q 001869 806 GNGHVSLTDFDLS 818 (1002)
Q Consensus 806 ~~g~vkL~DFG~a 818 (1002)
.++.+++.-.|+-
T Consensus 119 ~~~~p~i~hRGi~ 131 (219)
T 4ano_A 119 RALEPFFLHVGVK 131 (219)
T ss_dssp TTCCEEESCCEET
T ss_pred CCCcEEEEEcCCc
Confidence 9999999999975
No 412
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=73.13 E-value=22 Score=32.63 Aligned_cols=89 Identities=19% Similarity=0.265 Sum_probs=51.1
Q ss_pred HHHHHHHHHhcC-CcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEEE
Q 001869 188 SDIVKDALSTFQ-QTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGR 266 (1002)
Q Consensus 188 ~~~l~~ile~~~-d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e 266 (1002)
+.+++.+-+... +.|+++|. +|..++... .+.+|+++.. .+ .+..++.++ .+...
T Consensus 38 ~~~~~~~~~~~~~~~i~v~d~---~G~~~a~~~----------~~~iG~~~~~--~~--------~~~~al~G~-~~~~~ 93 (131)
T 1p0z_A 38 KALIDPMRSFSDATYITVGDA---SGQRLYHVN----------PDEIGKSMEG--GD--------SDEALINAK-SYVSV 93 (131)
T ss_dssp HHHHHHHHHHSCCSEEEEEET---TSBEEECSS----------GGGTTSBCCS--SC--------CHHHHHHCC-CEEEE
T ss_pred HHHHHHHHHhcCCCEEEEEcC---CCcEEEecC----------hhhCCCcccC--CC--------cHHHHhCCC-eEEEE
Confidence 344555444443 57888898 777776542 3347876431 11 123445444 44332
Q ss_pred EEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccch
Q 001869 267 LLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSK 305 (1002)
Q Consensus 267 ~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITe 305 (1002)
. .|..-+.-....||++++|+++|++.+..++..
T Consensus 94 ~-----~g~~g~~~~~~~PV~~~~g~viGvv~vg~~l~~ 127 (131)
T 1p0z_A 94 R-----KGSLGSSLRGKSPIQDATGKVIGIVSVGYTIEQ 127 (131)
T ss_dssp E-----EETTEEEEEEEEEEECTTCCEEEEEEEEEEGGG
T ss_pred E-----EccceeeEEEEEeEECCCCCEEEEEEEEEEhHH
Confidence 2 222122334455999888999999999888764
No 413
>4dah_A Sporulation kinase D; alpha-beta-alpha structure, structural genomics, midwest CEN structural genomics (MCSG), PSI-biology, PAS-like fold; 2.03A {Bacillus subtilis} PDB: 4dbj_A 4dbi_A 4dak_A 3fos_A
Probab=67.27 E-value=21 Score=35.60 Aligned_cols=98 Identities=7% Similarity=0.101 Sum_probs=59.9
Q ss_pred chHHHHHHHHHhcCC--cEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcE
Q 001869 186 RVSDIVKDALSTFQQ--TFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSY 263 (1002)
Q Consensus 186 ~~~~~l~~ile~~~d--~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~ 263 (1002)
.....|..+.+..+. +++++|. +|+++..... ...|.+ ... ...+..++..++.+
T Consensus 55 ~~~~~L~~~~~~~~~~~~i~i~d~---~G~~~~~~~~----------~~~~~~------~~~----r~~f~~a~~~~~~~ 111 (217)
T 4dah_A 55 KMQSILEKTFDSEPRFSGLYFLNA---KGDVTASTTE----------LKTKVN------LAD----RSFFIKAKETKKTV 111 (217)
T ss_dssp HHHHHHHHHHTTCTTEEEEEEEET---TCBEEEESSC----------CSSCCB------CTT----SHHHHHHHHHCSCE
T ss_pred HHHHHHHHHHhcCCcccEEEEECC---CCcEEEecCC----------CCCCCC------cch----hHHHHHHHhcCCcE
Confidence 344566666665544 6888888 7878876530 001111 111 13345566656665
Q ss_pred EEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhhH
Q 001869 264 CGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTE 308 (1002)
Q Consensus 264 ~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk~ 308 (1002)
-.+...-...|. ++-....||++.+|++.|+++...++....+
T Consensus 112 is~~~~~~~~g~--~~i~ia~pi~~~~g~~~Gvl~~~i~l~~l~~ 154 (217)
T 4dah_A 112 ISDSYSSRITGQ--PIFTICVPVLDSKRNVTDYLVAAIQIDYLKN 154 (217)
T ss_dssp ECCCEECTTTCS--EEEEEEEEEECTTSCEEEEEEEEEEHHHHHH
T ss_pred EeceEEcCCCCC--EEEEEEEEEECCCCCEEEEEEEEEcHHHHHH
Confidence 444433345566 5666778999989999999999888765443
No 414
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=64.26 E-value=43 Score=40.07 Aligned_cols=82 Identities=21% Similarity=0.324 Sum_probs=51.4
Q ss_pred ceEEEEEEeCCeEEEEEecCCCCcHHHHHhhCC-----------C--CCC--CHHHHHHHHHHHH--HHHHHHHHcCccc
Q 001869 732 PALYASFQTKTHVCLITDYCPGGELFLLLDRQP-----------T--KVL--KEDAVRFYAAEVV--VALEYLHCQGIIY 794 (1002)
Q Consensus 732 v~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~-----------~--~~l--~~~~i~~i~~qil--~aL~yLH~~gIiH 794 (1002)
+..|.+........+ .|++++.+|.+++.... . ..+ .......++..++ +.+.|+= ||
T Consensus 476 i~~Y~Vipls~~~GL-IE~V~s~tl~~i~~~~~~l~~~f~~~~p~~~~~~~~~~~ar~nF~~SlA~~Svv~YIL--Gl-- 550 (696)
T 2x6h_A 476 LTPYKVLATSSKHGF-LQYVDSCTVAEVLAREGNIHNFFRKHHPCDNGPYGISAEVMDTYIKSCAGYCVITYLL--GV-- 550 (696)
T ss_dssp CCCCCEEESSTTCEE-EECCCCEEHHHHHHHSSSHHHHHHHHSBCTTSSSSBCHHHHHHHHHHHHHHHHHHHHH--TC--
T ss_pred EeccEEEeccCCCCe-eeeCCCccHHHHHHhcChHHHHHHHHCCCccchhhhHHHHHHHHHHHHHHHHHHHHHc--cC--
Confidence 455666665554444 46666666666654321 1 011 2244555666655 3445553 43
Q ss_pred CCCCCCCEEEccCCcEEEEeccCC
Q 001869 795 RDLKPENVLLQGNGHVSLTDFDLS 818 (1002)
Q Consensus 795 rDLKP~NILl~~~g~vkL~DFG~a 818 (1002)
+|=.|+||||+.+|++.=+|||..
T Consensus 551 GDRH~~NILid~tG~v~HIDFG~~ 574 (696)
T 2x6h_A 551 GDRHLDNLLLTTNGKLFHIDFGYI 574 (696)
T ss_dssp CCCCTTTEEECTTSCEEECCCCSC
T ss_pred CCCCCcceEEeCCCCEEEEeehhh
Confidence 688999999999999999999987
No 415
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=57.95 E-value=16 Score=39.47 Aligned_cols=140 Identities=18% Similarity=0.237 Sum_probs=74.3
Q ss_pred CcccccccccCCcEEEEEEEEcCCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEE------------
Q 001869 670 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYAS------------ 737 (1002)
Q Consensus 670 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~------------ 737 (1002)
.++.++....|..|.++... ++..|+||-.. .-..+.+..++...-.+..|+..-+...
T Consensus 70 ~v~~I~~s~~Gstgvff~~t---d~~~~VVK~s~------~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~ 140 (342)
T 1cja_A 70 QFKGIERSEKGTEGLFFVET---ESGVFIVKRST------NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLA 140 (342)
T ss_dssp GEEEEEECCSTTSCEEEEEE---SSCEEEEECCT------THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHH
T ss_pred CeeEEEeccCCCCCeEEEEe---CCCEEEEeCcH------HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHH
Confidence 36666777777766555554 47789999431 1122223333333333455554222211
Q ss_pred -EE---------eCCeEEEEEecCCCCcHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC----ccc-CCCCCCCE
Q 001869 738 -FQ---------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG----IIY-RDLKPENV 802 (1002)
Q Consensus 738 -~~---------~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~g----IiH-rDLKP~NI 802 (1002)
+. ......++|+|++|..|...-.......+.....+.+. -+-+++.+..++ .+. .--.|+||
T Consensus 141 ~~~~~~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~~~~k~LG--~Ii~FDi~InN~DR~Pl~W~n~GN~~NI 218 (342)
T 1cja_A 141 AIDKSFRVITTLANQANILLMELVRGITLNKLTTTSAPEVLTKSTMQQLG--SLMALDVIVNNSDRLPIAWTNEGNLDNI 218 (342)
T ss_dssp HHCSSSCHHHHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCHHHHHHHH--HHHHHHHHHTCCSSSCSSSCSCCCGGGE
T ss_pred HhhhhhHHHHHhhcccceehhhhcCCCccccchhhhhhhhcCHHHHHhhc--hhheehhhhcCCccCcccccCCCChhhe
Confidence 00 12246799999988776643211100113333333211 134666776653 111 22588999
Q ss_pred EEccCC-cEEEEeccCCcc
Q 001869 803 LLQGNG-HVSLTDFDLSCL 820 (1002)
Q Consensus 803 Ll~~~g-~vkL~DFG~a~~ 820 (1002)
|++.++ .+.++|-++++.
T Consensus 219 L~~~~n~~~~~IDhn~af~ 237 (342)
T 1cja_A 219 MLSERGATVVPIDSKIIPL 237 (342)
T ss_dssp EEESBTTCEEECSCCCCCC
T ss_pred EEeCCCCeEEEEcCCcccc
Confidence 998754 599999999854
No 416
>4ew7_A Conjugative transfer: regulation; alpha-beta-alpha structure, structural genomics, midwest CEN structural genomics (MCSG), PSI-biology; 1.67A {Salmonella enterica subsp}
Probab=57.24 E-value=11 Score=32.91 Aligned_cols=44 Identities=14% Similarity=0.282 Sum_probs=33.8
Q ss_pred ccccchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCC
Q 001869 182 KGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYT 228 (1002)
Q Consensus 182 ~~L~~~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys 228 (1002)
+.+++..--.+.+..++|..+++-+.... |+|+|.+|.+|+--+
T Consensus 13 QSVnk~iL~iq~iY~nSPVpVCVRNq~Rk---ilYaN~aF~elF~Ke 56 (127)
T 4ew7_A 13 QSVNKYILSIQDIYKNSPVPVCVRNQSRK---IIYANGAFIELFSKE 56 (127)
T ss_dssp CHHHHHHHHHHHHHTTCSSCEEEECTTSC---EEEECHHHHHHTTSC
T ss_pred HHHHHHHHhHHhhhcCCCccEEEecccce---EEEecchHHHHhhcc
Confidence 33444444567788999999999998555 999999999996543
No 417
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=57.02 E-value=1.2 Score=51.40 Aligned_cols=64 Identities=3% Similarity=-0.061 Sum_probs=18.0
Q ss_pred ccccccccCCcEEEEEEEEcCCCeEEEE------EEeecccccChhHHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 001869 672 RPIKPLGSGDTGSVHLVELCGSGQYFAM------KAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 739 (1002)
Q Consensus 672 ~i~~~LG~G~~g~Vy~a~~~~~~~~vai------K~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 739 (1002)
.+.+.|| ||.||++....+..+||+ |..+... ........+.++..+++.++|||+++.+.+..
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~-~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDG-VSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC------------------------------------CBCCCEEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCcccccccc-ccccccccccccccccccccccccCCCcceEE
Confidence 3445666 999999998765567888 6554432 22334456778888999999999999988754
No 418
>4ew7_A Conjugative transfer: regulation; alpha-beta-alpha structure, structural genomics, midwest CEN structural genomics (MCSG), PSI-biology; 1.67A {Salmonella enterica subsp}
Probab=56.94 E-value=39 Score=29.44 Aligned_cols=91 Identities=11% Similarity=0.152 Sum_probs=51.9
Q ss_pred HHHHHHhccccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001869 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (1002)
Q Consensus 474 l~~i~e~~~~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~ 553 (1002)
...+..++|..+++-+.... |+|.|.+|.+||--+..-+-|...... .-+..-...+.-..++..|. .-.+..
T Consensus 22 iq~iY~nSPVpVCVRNq~Rk---ilYaN~aF~elF~Ked~~~sg~S~~~~-~vE~~LS~LELeCqsLGhG~---af~r~F 94 (127)
T 4ew7_A 22 IQDIYKNSPVPVCVRNQSRK---IIYANGAFIELFSKEDQPLSGDSYNRY-GVEVFLSSLELECQSLGHGA---AFCRRF 94 (127)
T ss_dssp HHHHHTTCSSCEEEECTTSC---EEEECHHHHHHTTSCCCGGGCTTSSHH-HHHHHHHHHHHHHHHHCTTC---EEEEEE
T ss_pred HHhhhcCCCccEEEecccce---EEEecchHHHHhhcccCcccCccccee-eehhhHHHHHHHHHhhcCCc---eEEEEe
Confidence 68889999999999999777 999999999995322212223332111 00000001112223333333 233445
Q ss_pred ecCCCEEEEEEEEEeeeC
Q 001869 554 TKSGNKFWNLFHLQPMRD 571 (1002)
Q Consensus 554 ~kdG~~~wv~~~~~pi~d 571 (1002)
.-.|+.+-+++......+
T Consensus 95 n~~~e~yQIRmE~iSf~~ 112 (127)
T 4ew7_A 95 NFHGEIYQIRMENISFDN 112 (127)
T ss_dssp EETTEEEEEEEEEEECTT
T ss_pred ecCCceEEEEEEEeeecC
Confidence 678888877766555543
No 419
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=51.04 E-value=53 Score=30.49 Aligned_cols=91 Identities=18% Similarity=0.194 Sum_probs=51.5
Q ss_pred hHHHHHHHHHhcC-CcEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCCcEEE
Q 001869 187 VSDIVKDALSTFQ-QTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG 265 (1002)
Q Consensus 187 ~~~~l~~ile~~~-d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~ 265 (1002)
.+.+++.+-+... +.|+++|. +|..++... .+.+|+++.. ++ +..++. |+.+..
T Consensus 43 l~~~~~~~~~~~~~~~i~v~d~---~G~~~~~~~----------~~~iG~~~~~---~~--------~~~al~-G~~~~~ 97 (142)
T 3by8_A 43 IQAIAEAVRKRNDLLFIVVTDM---QSLRYSHPE----------AQRIGQPFKG---DD--------ILKALN-GEENVA 97 (142)
T ss_dssp HHHHHHHHHHHTTCSEEEEEET---TCBBSCCSS----------GGGTTSBCCC---GG--------GTGGGG-TCCEEE
T ss_pred HHHHHHHHHhhcCCcEEEEECC---CCcEEECCC----------hHHCCCcCCC---CC--------HHHHhC-CCeEEE
Confidence 3455555554443 57888898 666665432 3468876431 11 122343 444433
Q ss_pred EEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchhh
Q 001869 266 RLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHT 307 (1002)
Q Consensus 266 e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITerk 307 (1002)
.. ....|. .-....||++++|+++|++.+..++....
T Consensus 98 ~~--~~~~g~---~~~~~~PV~~~~g~viGvv~vg~~~~~~~ 134 (142)
T 3by8_A 98 IN--RGFLAQ---ALRVFTPIYDENHKQIGVVAIGLELSRVT 134 (142)
T ss_dssp EE--CSSSSC---EEEEEEEEECTTSCEEEEEEEEEEHHHHH
T ss_pred Ee--cCccEE---EEEEEEeEEcCCCCEEEEEEEeEEHHHHH
Confidence 21 122232 22344599988899999999998876543
No 420
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=49.65 E-value=62 Score=29.42 Aligned_cols=77 Identities=16% Similarity=0.182 Sum_probs=44.9
Q ss_pred ccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCCEEEE
Q 001869 483 KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGNKFWN 562 (1002)
Q Consensus 483 ~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~~~~kdG~~~wv 562 (1002)
+.|+++|.+|. .+.... .+.+|+++.. .+ .+..++. |+.+.... ....| +.
T Consensus 51 ~~i~v~d~~G~---~~a~~~----------~~~iG~~~~~--~~--------~~~~al~-G~~~~~~~--~g~~g---~~ 101 (131)
T 1p0z_A 51 TYITVGDASGQ---RLYHVN----------PDEIGKSMEG--GD--------SDEALIN-AKSYVSVR--KGSLG---SS 101 (131)
T ss_dssp SEEEEEETTSB---EEECSS----------GGGTTSBCCS--SC--------CHHHHHH-CCCEEEEE--EETTE---EE
T ss_pred CEEEEEcCCCc---EEEecC----------hhhCCCcccC--CC--------cHHHHhC-CCeEEEEE--Eccce---ee
Confidence 68999999766 554332 3447775321 11 1233444 44443322 12222 33
Q ss_pred EEEEEeeeCCCCCEEEEEEEEecCCc
Q 001869 563 LFHLQPMRDQKGEVQYFIGVQLDGSE 588 (1002)
Q Consensus 563 ~~~~~pi~d~~G~v~~~vgi~~DITe 588 (1002)
-....||++++|+++|++++..++..
T Consensus 102 ~~~~~PV~~~~g~viGvv~vg~~l~~ 127 (131)
T 1p0z_A 102 LRGKSPIQDATGKVIGIVSVGYTIEQ 127 (131)
T ss_dssp EEEEEEEECTTCCEEEEEEEEEEGGG
T ss_pred EEEEEeEECCCCCEEEEEEEEEEhHH
Confidence 34456999889999999999988754
No 421
>4dah_A Sporulation kinase D; alpha-beta-alpha structure, structural genomics, midwest CEN structural genomics (MCSG), PSI-biology, PAS-like fold; 2.03A {Bacillus subtilis} PDB: 4dbj_A 4dbi_A 4dak_A 3fos_A
Probab=47.85 E-value=35 Score=33.90 Aligned_cols=90 Identities=10% Similarity=0.055 Sum_probs=55.2
Q ss_pred HHHHHHhcc--ccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEE
Q 001869 474 LATTLERIE--KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLI 551 (1002)
Q Consensus 474 l~~i~e~~~--~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~e~~ 551 (1002)
|..+.+..+ ..++++|.+|. ++..+.. . +.. ....++ ..+..++..+..+-.+..
T Consensus 60 L~~~~~~~~~~~~i~i~d~~G~---~~~~~~~----------~--~~~----~~~~~r----~~f~~a~~~~~~~is~~~ 116 (217)
T 4dah_A 60 LEKTFDSEPRFSGLYFLNAKGD---VTASTTE----------L--KTK----VNLADR----SFFIKAKETKKTVISDSY 116 (217)
T ss_dssp HHHHHTTCTTEEEEEEEETTCB---EEEESSC----------C--SSC----CBCTTS----HHHHHHHHHCSCEECCCE
T ss_pred HHHHHhcCCcccEEEEECCCCc---EEEecCC----------C--CCC----CCcchh----HHHHHHHhcCCcEEeceE
Confidence 555555443 47899999777 7765420 0 111 011112 345556666666555544
Q ss_pred EEecCCCEEEEEEEEEeeeCCCCCEEEEEEEEecCCc
Q 001869 552 NYTKSGNKFWNLFHLQPMRDQKGEVQYFIGVQLDGSE 588 (1002)
Q Consensus 552 ~~~kdG~~~wv~~~~~pi~d~~G~v~~~vgi~~DITe 588 (1002)
.-..+|. ++-....|+++.+|++.|++++..++..
T Consensus 117 ~~~~~g~--~~i~ia~pi~~~~g~~~Gvl~~~i~l~~ 151 (217)
T 4dah_A 117 SSRITGQ--PIFTICVPVLDSKRNVTDYLVAAIQIDY 151 (217)
T ss_dssp ECTTTCS--EEEEEEEEEECTTSCEEEEEEEEEEHHH
T ss_pred EcCCCCC--EEEEEEEEEECCCCCEEEEEEEEEcHHH
Confidence 4345676 5666779999989999999998877543
No 422
>4e04_A Bacteriophytochrome (light-regulated signal trans histidine kinase), PHYB1; bacteriophytochrome chromophore binding domain; HET: LBV; 1.79A {Rhodopseudomonas palustris}
Probab=42.67 E-value=49 Score=35.70 Aligned_cols=53 Identities=17% Similarity=0.260 Sum_probs=40.2
Q ss_pred EEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHHcCC
Q 001869 202 FVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ 261 (1002)
Q Consensus 202 i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~ 261 (1002)
++++| .+++|+.+...+..++|.++++++|+++..++.+ .....++..+....
T Consensus 32 Ll~~~---~~~~I~~~S~N~~~~lg~~~~~~lG~~l~~ll~~----~~~~~l~~~l~~~~ 84 (327)
T 4e04_A 32 LLALA---ADMTIVAGSDNLPELTGLAIGALIGRSAADVFDS----ETHNRLTIALAEPG 84 (327)
T ss_dssp EEEEC---TTCBEEEEETTHHHHHSCCHHHHTTCBHHHHBCH----HHHHHHHHHHHSCS
T ss_pred EEEEc---CCCeEEEEcccHHHHhCCChHhhcCCCHHHHcCH----HHHHHHHHHhhccc
Confidence 34455 3889999999999999999999999998877543 34455666665543
No 423
>4e04_A Bacteriophytochrome (light-regulated signal trans histidine kinase), PHYB1; bacteriophytochrome chromophore binding domain; HET: LBV; 1.79A {Rhodopseudomonas palustris}
Probab=42.37 E-value=52 Score=35.49 Aligned_cols=55 Identities=20% Similarity=0.262 Sum_probs=41.0
Q ss_pred ccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCC
Q 001869 483 KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQT 544 (1002)
Q Consensus 483 ~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~l~~~l~~~~ 544 (1002)
-.++++|. +++|+.++..+.+++|.+.++++|++...+..+ .....+...+....
T Consensus 30 G~Ll~~~~---~~~I~~~S~N~~~~lg~~~~~~lG~~l~~ll~~----~~~~~l~~~l~~~~ 84 (327)
T 4e04_A 30 GLLLALAA---DMTIVAGSDNLPELTGLAIGALIGRSAADVFDS----ETHNRLTIALAEPG 84 (327)
T ss_dssp SEEEEECT---TCBEEEEETTHHHHHSCCHHHHTTCBHHHHBCH----HHHHHHHHHHHSCS
T ss_pred eEEEEEcC---CCeEEEEcccHHHHhCCChHhhcCCCHHHHcCH----HHHHHHHHHhhccc
Confidence 45566664 566999999999999999999999997777643 34455666665543
No 424
>3lif_A Putative diguanylate cyclase (ggdef) with PAS/PAC; PDC fold, signaling protein; HET: CIT; 2.70A {Rhodopseudomonas palustris}
Probab=40.35 E-value=1.2e+02 Score=30.54 Aligned_cols=96 Identities=11% Similarity=0.164 Sum_probs=56.8
Q ss_pred chHHHHHHHHHhcCC--cEEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCCCCChHHHHHHHHHHH--cCC
Q 001869 186 RVSDIVKDALSTFQQ--TFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQ--NGQ 261 (1002)
Q Consensus 186 ~~~~~l~~ile~~~d--~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~--~g~ 261 (1002)
.....|+.+....+. +++++|. +|+ +..... .. ..+.++ .. ...+..++. .+.
T Consensus 55 ~~~~~L~~~~~~~~~~~~i~i~d~---~G~-~~~s~~------~~---~~~~~~------~~----r~~f~~a~~~~~~~ 111 (254)
T 3lif_A 55 VFNERLRALADNLPQLSDVAILDA---DGQ-LTYASV------KP---VPALDN------SD----RSYFRYHRANDDHT 111 (254)
T ss_dssp HHHHHHHHHHHHCTTEEEEEEECT---TSB-EEEESS------SS---EECCBC------TT----SHHHHHHHHCCCCC
T ss_pred HHHHHHHHHHhcCCccceEEEECC---CCC-EecCCC------CC---CCCCCc------cc----HHHHHHHHhCCCCC
Confidence 345667777776664 6888888 888 443221 00 011111 11 133555665 455
Q ss_pred cEEEEEEEEecCCcEEEEEEEeeeeecCCCCEEEEEEEEeccchh
Q 001869 262 SYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKH 306 (1002)
Q Consensus 262 ~~~~e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITer 306 (1002)
.+-.+...-...|. |+-....||++.+|++.|++++..++...
T Consensus 112 ~~is~p~~~~~~g~--~~i~~~~pi~~~~g~~~Gvl~~~i~l~~l 154 (254)
T 3lif_A 112 LLITGPIQSRTSGV--WVFVVSRRLETTDGKFFGVVVATIESEYF 154 (254)
T ss_dssp CEEEEEEECTTTCC--EEEEEEEEEECTTCCEEEEEEEEECHHHH
T ss_pred eEECCceecCCCCc--EEEEEEeeeeCCCCCEeEEEEEEECHHHH
Confidence 55554443334565 56677789999899999999988887543
No 425
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=37.95 E-value=5.4e+02 Score=30.10 Aligned_cols=82 Identities=20% Similarity=0.361 Sum_probs=52.7
Q ss_pred ceEEEEEEeCCeEEEEEecCCCCcHHHHHhhC-----------CCCC----CCHHHHHHHHHHHH--HHHHHHHHcCccc
Q 001869 732 PALYASFQTKTHVCLITDYCPGGELFLLLDRQ-----------PTKV----LKEDAVRFYAAEVV--VALEYLHCQGIIY 794 (1002)
Q Consensus 732 v~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~-----------~~~~----l~~~~i~~i~~qil--~aL~yLH~~gIiH 794 (1002)
+..|.+...+....+ .|++++.++.+.+... +... ........++..++ +.+.|+= ||
T Consensus 402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YIL--Gi-- 476 (614)
T 3ls8_A 402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYIL--GV-- 476 (614)
T ss_dssp CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHH--TC--
T ss_pred eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheee--ec--
Confidence 566777776665554 5777776666655421 1100 12344556666655 3445553 44
Q ss_pred CCCCCCCEEEccCCcEEEEeccCC
Q 001869 795 RDLKPENVLLQGNGHVSLTDFDLS 818 (1002)
Q Consensus 795 rDLKP~NILl~~~g~vkL~DFG~a 818 (1002)
+|=.++||||+.+|++.=+|||..
T Consensus 477 gDRH~~NILld~tG~v~HIDFG~~ 500 (614)
T 3ls8_A 477 GDRHLDNLLLTKTGKLFHIDFGYI 500 (614)
T ss_dssp CCCCTTSEEECTTSCEEECCCSSC
T ss_pred cCCCCcceeEcCCCCEeeeehHHh
Confidence 588899999999999999999987
No 426
>3s7o_A Bacteriophytochrome; biliverdin, PAS, GAF, photoreceptor, fluorescent protein; HET: LBV GOL; 1.24A {Deinococcus radiodurans} PDB: 3s7n_A* 3s7p_A* 3s7q_A* 2o9c_A* 2o9b_A* 1ztu_A*
Probab=32.31 E-value=24 Score=38.35 Aligned_cols=42 Identities=10% Similarity=0.044 Sum_probs=34.6
Q ss_pred ccEEEEcCCCCCCCEEecCHHHHHHcCCChhhhcCCCCccccCC
Q 001869 483 KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGP 526 (1002)
Q Consensus 483 ~~I~i~D~~G~d~~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~ 526 (1002)
-.++++|.. +++|+.++..+.+++|.++++++|++...+..+
T Consensus 53 G~LL~l~~~--~~~I~~~S~N~~~~lg~~~~~llG~~l~~ll~~ 94 (343)
T 3s7o_A 53 GALLTADGH--SGEVLQMSLNAATFLGQEPTVLRGQTLAALLPE 94 (343)
T ss_dssp SEEEEEETT--TCBEEEEETTHHHHHSSCHHHHTTCBHHHHSTT
T ss_pred eEEEEEECC--CCEEEEEcccHHHHhCcChHHHcCCCHHHHHhH
Confidence 455666653 566999999999999999999999998777665
No 427
>3s7o_A Bacteriophytochrome; biliverdin, PAS, GAF, photoreceptor, fluorescent protein; HET: LBV GOL; 1.24A {Deinococcus radiodurans} PDB: 3s7n_A* 3s7p_A* 3s7q_A* 2o9c_A* 2o9b_A* 1ztu_A*
Probab=27.72 E-value=29 Score=37.78 Aligned_cols=40 Identities=13% Similarity=0.118 Sum_probs=33.5
Q ss_pred EEEEeCCCCCCcEEEcchHHHHHcCCChhHHcCCCCCcCCCC
Q 001869 202 FVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGA 243 (1002)
Q Consensus 202 i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~ 243 (1002)
.+++|. .+++|+.+...+..++|.++++++|+++..++.+
T Consensus 55 LL~l~~--~~~~I~~~S~N~~~~lg~~~~~llG~~l~~ll~~ 94 (343)
T 3s7o_A 55 LLTADG--HSGEVLQMSLNAATFLGQEPTVLRGQTLAALLPE 94 (343)
T ss_dssp EEEEET--TTCBEEEEETTHHHHHSSCHHHHTTCBHHHHSTT
T ss_pred EEEEEC--CCCEEEEEcccHHHHhCcChHHHcCCCHHHHHhH
Confidence 344554 3788999999999999999999999998877765
No 428
>3clo_A Transcriptional regulator; NP_811094.1, bacterial regulatory proteins, LUXR family, structural genomics; 2.04A {Bacteroides thetaiotaomicron vpi-5482}
Probab=22.39 E-value=4.3e+02 Score=26.78 Aligned_cols=47 Identities=15% Similarity=0.170 Sum_probs=35.8
Q ss_pred ccchHHHHHHHHHhcCCcEEEEeCCCCCCcEEEcchHHHHHcCCChhHH
Q 001869 184 LPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEV 232 (1002)
Q Consensus 184 L~~~~~~l~~ile~~~d~i~v~D~~~~dG~I~~~N~a~~~l~Gys~eEl 232 (1002)
+........+........++++|-. .+++.+++.++..++||+++++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~l~D~~--~~~~~~~s~~~~~llG~~~~~~ 74 (258)
T 3clo_A 28 VEQHQQFVRSLTEVNGGCAVISDLS--NRKSYVTVHPWANFLGLTPEEA 74 (258)
T ss_dssp HHHHHHHHHHHHHHHSSEEEEEETT--TTEEEEEECTTCGGGCCCHHHH
T ss_pred HHHHHHHHHHHHHHcCCeEEEEEcC--CCeEEEEeCCHHHHhCCCcccc
Confidence 3344444555555567778888854 6779999999999999999988
No 429
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=21.76 E-value=1.4e+02 Score=37.61 Aligned_cols=41 Identities=17% Similarity=0.415 Sum_probs=30.5
Q ss_pred HHHHHHHH--HHHHHHHHcCcccCCCCCCCEEEccCCcEEEEeccCC
Q 001869 774 RFYAAEVV--VALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 818 (1002)
Q Consensus 774 ~~i~~qil--~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG~a 818 (1002)
..+++.++ +.+.|+ .|| +|=.++||||+.+|++.=+|||..
T Consensus 918 ~nF~~S~A~ysvv~Yi--Lgi--gDRH~~NILid~tG~v~HIDFG~~ 960 (1091)
T 3hhm_A 918 DLFTRSCAGYCVATFI--LGI--GDRHNSNIMVKDDGQLFHIDFGHF 960 (1091)
T ss_dssp HHHHHHHHHHHHHHHH--HTC--CCCCTTTEEEETTSCEEECCCCCC
T ss_pred HHHHHHhhhhhheEEE--Eee--cCCCCcceEEeCCCCEEEEeehhh
Confidence 44555555 334454 344 688899999999999999999987
No 430
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=21.12 E-value=97 Score=39.10 Aligned_cols=24 Identities=21% Similarity=0.418 Sum_probs=22.8
Q ss_pred CCCCCCCEEEccCCcEEEEeccCC
Q 001869 795 RDLKPENVLLQGNGHVSLTDFDLS 818 (1002)
Q Consensus 795 rDLKP~NILl~~~g~vkL~DFG~a 818 (1002)
+|=.++||||+.+|++.=+|||.+
T Consensus 940 GDRH~~NILid~tG~v~HIDFG~~ 963 (1092)
T 2y3a_A 940 GDRHSDNIMVKKTGQLFHIDFGHI 963 (1092)
T ss_dssp CCCCTTTEEECTTSCEEECCCSCC
T ss_pred CCCCCccEEEecCCCEEEEeehhh
Confidence 799999999999999999999987
Done!