BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001873
(1001 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 182 bits (462), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 208/749 (27%), Positives = 316/749 (42%), Gaps = 110/749 (14%)
Query: 34 ALDEQGQALLTWKNSLNSSTDALSSWNPAETSPCKWFGIHCSSNGEVVEISLKAVDLQGS 93
+L + L+++K+ L + L W+ + +PC + G+ C + +V I L + L
Sbjct: 6 SLYREIHQLISFKDVL-PDKNLLPDWS-SNKNPCTFDGVTCRDD-KVTSIDLSSKPLNVG 62
Query: 94 LPSIFQPLKSLKRL---IISSCNLTGTIPKEFGDYRELTFIDLSGNSLWGEIPTEV---- 146
++ L SL L +S+ ++ G++ F LT +DLS NSL G + T
Sbjct: 63 FSAVSSSLLSLTGLESLFLSNSHINGSV-SGFKCSASLTSLDLSRNSLSGPVTTLTSLGS 121
Query: 147 CRLRKLESLYLNTNLLEGEIPSDIGNLSSLAYLTLYDNQLSGK------IPKSIGALSKL 200
C K ++ NT G++ + L+SL L L N +SG + G L L
Sbjct: 122 CSGLKFLNVSSNTLDFPGKVSGGL-KLNSLEVLDLSANSISGANVVGWVLSDGCGELKHL 180
Query: 201 QVFRAGGNQNLKGELPWEIGNCSNLVMLGLAETSISGNVPSSIGMLERIQTIAIYTSLLS 260
+ GN+ + G++ ++ C NL L ++ + S +P +G +Q + I + LS
Sbjct: 181 AI---SGNK-ISGDV--DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLS 233
Query: 261 GPIPEEIGNCSELQNLYLYQNSISGPIPGRIGALSKLKSLLLWQNSLVGAIPDEL-GSCT 319
G I C+EL+ L + N GPIP L L+ L L +N G IPD L G+C
Sbjct: 234 GDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACD 291
Query: 320 ELTVVDFSDNLLTGSIPRSFG----------------------NLLK---LQELQLSVNQ 354
LT +D S N G++P FG LLK L+ L LS N+
Sbjct: 292 TLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNE 351
Query: 355 LSGTIPIEIATCTA---------------------------LTHLEIDNNAISGEIPADI 387
SG +P + +A L L + NN +G+IP +
Sbjct: 352 FSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTL 411
Query: 388 GNINGLTLFFAWKNKLTGNIPESLSQCQELQALDFSYNNLSGPIPKEIFGXXXXXXXXXX 447
N + L N L+G IP SL +L+ L N L G IP+E+
Sbjct: 412 SNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILD 471
Query: 448 XXXXXGFIPPDIGNCTTXXXXXXXXXXXSGTIPSEMGNLKHLNFVDMSENHLVGGIPPSV 507
G IP + NCT +G IP +G L++L + +S N G IP +
Sbjct: 472 FNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAEL 531
Query: 508 VGCQSLEFLDLHSNGLTGSVPDTLPTSLQLVDLSDNRLSGSL------------AHSIGS 555
C+SL +LDL++N G++P + Q ++ N ++G H G+
Sbjct: 532 GDCRSLIWLDLNTNLFNGTIPAAMFK--QSGKIAANFIAGKRYVYIKNDGMKKECHGAGN 589
Query: 556 LTEXX-XXXXXXNQLSGRIPAEILS-------------CRKLILLDIGNNRFSGEIPKEL 601
L E N+LS R P I S ++ LD+ N SG IPKE+
Sbjct: 590 LLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEI 649
Query: 602 GQXXXXXXXXXXXXXQFSGEIPSEFSGLTKLGILDLSHNKLSGDL-DALASLQNLVSLNV 660
G SG IP E L L ILDLS NKL G + A+++L L +++
Sbjct: 650 GSMPYLFILNLGHN-DISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDL 708
Query: 661 SFNDFSGELPNTPFFRKLPLSDLASNRGL 689
S N+ SG +P F P + +N GL
Sbjct: 709 SNNNLSGPIPEMGQFETFPPAKFLNNPGL 737
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 208/749 (27%), Positives = 316/749 (42%), Gaps = 110/749 (14%)
Query: 34 ALDEQGQALLTWKNSLNSSTDALSSWNPAETSPCKWFGIHCSSNGEVVEISLKAVDLQGS 93
+L + L+++K+ L + L W+ + +PC + G+ C + +V I L + L
Sbjct: 9 SLYREIHQLISFKDVL-PDKNLLPDWS-SNKNPCTFDGVTCRDD-KVTSIDLSSKPLNVG 65
Query: 94 LPSIFQPLKSLKRL---IISSCNLTGTIPKEFGDYRELTFIDLSGNSLWGEIPTEV---- 146
++ L SL L +S+ ++ G++ F LT +DLS NSL G + T
Sbjct: 66 FSAVSSSLLSLTGLESLFLSNSHINGSV-SGFKCSASLTSLDLSRNSLSGPVTTLTSLGS 124
Query: 147 CRLRKLESLYLNTNLLEGEIPSDIGNLSSLAYLTLYDNQLSGK------IPKSIGALSKL 200
C K ++ NT G++ + L+SL L L N +SG + G L L
Sbjct: 125 CSGLKFLNVSSNTLDFPGKVSGGL-KLNSLEVLDLSANSISGANVVGWVLSDGCGELKHL 183
Query: 201 QVFRAGGNQNLKGELPWEIGNCSNLVMLGLAETSISGNVPSSIGMLERIQTIAIYTSLLS 260
+ GN+ + G++ ++ C NL L ++ + S +P +G +Q + I + LS
Sbjct: 184 AI---SGNK-ISGDV--DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLS 236
Query: 261 GPIPEEIGNCSELQNLYLYQNSISGPIPGRIGALSKLKSLLLWQNSLVGAIPDEL-GSCT 319
G I C+EL+ L + N GPIP L L+ L L +N G IPD L G+C
Sbjct: 237 GDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACD 294
Query: 320 ELTVVDFSDNLLTGSIPRSFG----------------------NLLK---LQELQLSVNQ 354
LT +D S N G++P FG LLK L+ L LS N+
Sbjct: 295 TLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNE 354
Query: 355 LSGTIPIEIATCTA---------------------------LTHLEIDNNAISGEIPADI 387
SG +P + +A L L + NN +G+IP +
Sbjct: 355 FSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTL 414
Query: 388 GNINGLTLFFAWKNKLTGNIPESLSQCQELQALDFSYNNLSGPIPKEIFGXXXXXXXXXX 447
N + L N L+G IP SL +L+ L N L G IP+E+
Sbjct: 415 SNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILD 474
Query: 448 XXXXXGFIPPDIGNCTTXXXXXXXXXXXSGTIPSEMGNLKHLNFVDMSENHLVGGIPPSV 507
G IP + NCT +G IP +G L++L + +S N G IP +
Sbjct: 475 FNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAEL 534
Query: 508 VGCQSLEFLDLHSNGLTGSVPDTLPTSLQLVDLSDNRLSGSL------------AHSIGS 555
C+SL +LDL++N G++P + Q ++ N ++G H G+
Sbjct: 535 GDCRSLIWLDLNTNLFNGTIPAAMFK--QSGKIAANFIAGKRYVYIKNDGMKKECHGAGN 592
Query: 556 LTEXX-XXXXXXNQLSGRIPAEILS-------------CRKLILLDIGNNRFSGEIPKEL 601
L E N+LS R P I S ++ LD+ N SG IPKE+
Sbjct: 593 LLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEI 652
Query: 602 GQXXXXXXXXXXXXXQFSGEIPSEFSGLTKLGILDLSHNKLSGDL-DALASLQNLVSLNV 660
G SG IP E L L ILDLS NKL G + A+++L L +++
Sbjct: 653 GSMPYLFILNLGHN-DISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDL 711
Query: 661 SFNDFSGELPNTPFFRKLPLSDLASNRGL 689
S N+ SG +P F P + +N GL
Sbjct: 712 SNNNLSGPIPEMGQFETFPPAKFLNNPGL 740
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 142 bits (359), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 122/212 (57%), Gaps = 11/212 (5%)
Query: 767 NLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGA---FSSEIQTLGSIRHKNIV 823
N ++ N++G G G VY+ + +G +AVK++ G F +E++ + H+N++
Sbjct: 39 NFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLL 98
Query: 824 RLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGA--DWEARYEVVLGVAHALAYLHHD 881
RL G+ +LL Y Y+ NGS++S L + DW R + LG A LAYLH
Sbjct: 99 RLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDH 158
Query: 882 CMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAP 941
C P I+H DVKA N+LL ++A + DFGLA+++ + + + G+ G++AP
Sbjct: 159 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM------DYKDXHVXXAVRGTIGHIAP 212
Query: 942 EHASMQRITEKSDVYSFGVVLLEVLTGRHPLD 973
E+ S + +EK+DV+ +GV+LLE++TG+ D
Sbjct: 213 EYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 244
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 141 bits (355), Expect = 2e-33, Method: Composition-based stats.
Identities = 80/237 (33%), Positives = 132/237 (55%), Gaps = 14/237 (5%)
Query: 745 ADDTWEMTLYQKLDFSIDDV---VRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSS 801
A++ E+ L Q FS+ ++ N + N++G G G VY+ + +G +AVK++
Sbjct: 6 AEEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEE 65
Query: 802 DESGA---FSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG 858
G F +E++ + H+N++RL G+ +LL Y Y+ NGS++S L +
Sbjct: 66 RTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ 125
Query: 859 A--DWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVS 916
DW R + LG A LAYLH C P I+H DVKA N+LL ++A + DFGLA+++
Sbjct: 126 PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM- 184
Query: 917 GSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLD 973
+ + + G G++APE+ S + +EK+DV+ +GV+LLE++TG+ D
Sbjct: 185 -----DYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 236
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 121/231 (52%), Gaps = 13/231 (5%)
Query: 761 IDDVVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQT--LGSIR 818
+++ N +IG G G VY+ + +G +A+K+ G E + L R
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCR 93
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAG--KGGADWEARYEVVLGVAHALA 876
H ++V L+G+ +N +L Y Y+ NG+L L+G+ WE R E+ +G A L
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 877 YLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSY 936
YLH I+H DVK++N+LL + + DFG+++ G+ D +T+ + G+
Sbjct: 154 YLH---TRAIIHRDVKSINILLDENFVPKITDFGISK--KGTELD---QTHLXXVVKGTL 205
Query: 937 GYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGG-APLVQWT 986
GY+ PE+ R+TEKSDVYSFGVVL EVL R + +LP L +W
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWA 256
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 120/231 (51%), Gaps = 13/231 (5%)
Query: 761 IDDVVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQT--LGSIR 818
+++ N +IG G G VY+ + +G +A+K+ G E + L R
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCR 93
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAG--KGGADWEARYEVVLGVAHALA 876
H ++V L+G+ +N +L Y Y+ NG+L L+G+ WE R E+ +G A L
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 877 YLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSY 936
YLH I+H DVK++N+LL + + DFG+++ + G +T+ + G+
Sbjct: 154 YLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELG-----QTHLXXVVKGTL 205
Query: 937 GYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGG-APLVQWT 986
GY+ PE+ R+TEKSDVYSFGVVL EVL R + +LP L +W
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWA 256
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 116/209 (55%), Gaps = 17/209 (8%)
Query: 772 NVIGTGSSGVVYRVTIPNGETLAVKKMW------SSDESGAFSSEIQTLGSIRHKNIVRL 825
N +G G GVVY+ + N T+AVKK+ + + F EI+ + +H+N+V L
Sbjct: 37 NKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 826 LGWGSNKNLKLLFYDYLPNGSLSSLLHG-AGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
LG+ S+ + L Y Y+PNGSL L G W R ++ G A+ + +LH +
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH- 154
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+H D+K+ N+LL + A ++DFGLAR + ++T ++ G+ YMAPE A
Sbjct: 155 --IHRDIKSANILLDEAFTAKISDFGLAR-----ASEKFAQTVMXSRIVGTTAYMAPE-A 206
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLD 973
IT KSD+YSFGVVLLE++TG +D
Sbjct: 207 LRGEITPKSDIYSFGVVLLEIITGLPAVD 235
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 123 bits (308), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 116/209 (55%), Gaps = 17/209 (8%)
Query: 772 NVIGTGSSGVVYRVTIPNGETLAVKKMW------SSDESGAFSSEIQTLGSIRHKNIVRL 825
N +G G GVVY+ + N T+AVKK+ + + F EI+ + +H+N+V L
Sbjct: 37 NKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 826 LGWGSNKNLKLLFYDYLPNGSLSSLLHG-AGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
LG+ S+ + L Y Y+PNGSL L G W R ++ G A+ + +LH +
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH- 154
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+H D+K+ N+LL + A ++DFGLAR + ++T ++ G+ YMAPE A
Sbjct: 155 --IHRDIKSANILLDEAFTAKISDFGLAR-----ASEKFAQTVMXXRIVGTTAYMAPE-A 206
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLD 973
IT KSD+YSFGVVLLE++TG +D
Sbjct: 207 LRGEITPKSDIYSFGVVLLEIITGLPAVD 235
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 115/209 (55%), Gaps = 17/209 (8%)
Query: 772 NVIGTGSSGVVYRVTIPNGETLAVKKMW------SSDESGAFSSEIQTLGSIRHKNIVRL 825
N +G G GVVY+ + N T+AVKK+ + + F EI+ + +H+N+V L
Sbjct: 31 NKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 89
Query: 826 LGWGSNKNLKLLFYDYLPNGSLSSLLHG-AGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
LG+ S+ + L Y Y+PNGSL L G W R ++ G A+ + +LH +
Sbjct: 90 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH- 148
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+H D+K+ N+LL + A ++DFGLAR + ++ ++ G+ YMAPE A
Sbjct: 149 --IHRDIKSANILLDEAFTAKISDFGLAR-----ASEKFAQXVMXXRIVGTTAYMAPE-A 200
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLD 973
IT KSD+YSFGVVLLE++TG +D
Sbjct: 201 LRGEITPKSDIYSFGVVLLEIITGLPAVD 229
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 111/209 (53%), Gaps = 17/209 (8%)
Query: 772 NVIGTGSSGVVYRVTIPNGETLAVKKMW------SSDESGAFSSEIQTLGSIRHKNIVRL 825
N G G GVVY+ + N T+AVKK+ + + F EI+ +H+N+V L
Sbjct: 28 NKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVEL 86
Query: 826 LGWGSNKNLKLLFYDYLPNGSLSSLLHG-AGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
LG+ S+ + L Y Y PNGSL L G W R ++ G A+ + +LH +
Sbjct: 87 LGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH- 145
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+H D+K+ N+LL + A ++DFGLAR + ++ ++ G+ Y APE A
Sbjct: 146 --IHRDIKSANILLDEAFTAKISDFGLAR-----ASEKFAQXVXXSRIVGTTAYXAPE-A 197
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLD 973
IT KSD+YSFGVVLLE++TG +D
Sbjct: 198 LRGEITPKSDIYSFGVVLLEIITGLPAVD 226
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 103/210 (49%), Gaps = 14/210 (6%)
Query: 767 NLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNI 822
+L IG GS G V+R +G +AVK + D F E+ + +RH NI
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 823 VRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAG-KGGADWEARYEVVLGVAHALAYLHHD 881
V +G + + +YL GSL LLH +G + D R + VA + YLH+
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 882 CMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAP 941
PPI+H D+K+ N+L+ Y + DFGL+R+ S AG+ +MAP
Sbjct: 157 N-PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL-------KASXFLXSKXAAGTPEWMAP 208
Query: 942 EHASMQRITEKSDVYSFGVVLLEVLTGRHP 971
E + EKSDVYSFGV+L E+ T + P
Sbjct: 209 EVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 106/210 (50%), Gaps = 14/210 (6%)
Query: 767 NLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNI 822
+L IG GS G V+R +G +AVK + D F E+ + +RH NI
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 823 VRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAG-KGGADWEARYEVVLGVAHALAYLHHD 881
V +G + + +YL GSL LLH +G + D R + VA + YLH+
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 882 CMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAP 941
PPI+H ++K+ N+L+ Y + DFGL+R+ + + + S AG+ +MAP
Sbjct: 157 N-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSA-------AGTPEWMAP 208
Query: 942 EHASMQRITEKSDVYSFGVVLLEVLTGRHP 971
E + EKSDVYSFGV+L E+ T + P
Sbjct: 209 EVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 115/245 (46%), Gaps = 27/245 (11%)
Query: 190 IPKSIGALSKLQVFRAGGNQNLKGELPWEIGNCSNLVMLGLAETSISGNVPSSIGMLERI 249
IP S+ L L GG NL G +P I + L L + T++SG +P + ++ +
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 250 QTIAIYTSLLSGPIPEEIGNCSELQNLYLYQNSISGPIPGRIGALSKL-KSLLLWQNSLV 308
T+ + LSG +P I + L + N ISG IP G+ SKL S+ + +N L
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 309 GAIPDELGSCTELTVVDFSDNLLTGSIPRSFGNLLKLQELQLSVNQLSGTIPIEIATCTA 368
G IP + L VD S N+L G FG+ Q++ L+ N L+
Sbjct: 188 GKIPPTFAN-LNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLA------------ 234
Query: 369 LTHLEIDNNAISGEIPADIGNINGLTLFFAWKNKLTGNIPESLSQCQELQALDFSYNNLS 428
++ +S N+NGL L N++ G +P+ L+Q + L +L+ S+NNL
Sbjct: 235 ---FDLGKVGLSK-------NLNGLDL---RNNRIYGTLPQGLTQLKFLHSLNVSFNNLC 281
Query: 429 GPIPK 433
G IP+
Sbjct: 282 GEIPQ 286
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 142/308 (46%), Gaps = 19/308 (6%)
Query: 32 CDALDEQGQALLTWKNSLNSSTDALSSWNPAETSPCK--WFGIHCSSNGEVVEISLKAVD 89
C+ D+Q ALL K L + T LSSW P T C W G+ C ++ + ++ +D
Sbjct: 3 CNPQDKQ--ALLQIKKDLGNPT-TLSSWLPT-TDCCNRTWLGVLCDTDTQTYRVN--NLD 56
Query: 90 LQG-------SLPSIFQPLKSLKRLIISSCN-LTGTIPKEFGDYRELTFIDLSGNSLWGE 141
L G +PS L L L I N L G IP +L ++ ++ ++ G
Sbjct: 57 LSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGA 116
Query: 142 IPTEVCRLRKLESLYLNTNLLEGEIPSDIGNLSSLAYLTLYDNQLSGKIPKSIGALSKLQ 201
IP + +++ L +L + N L G +P I +L +L +T N++SG IP S G+ SKL
Sbjct: 117 IPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLF 176
Query: 202 VFRAGGNQNLKGELPWEIGNCSNLVMLGLAETSISGNVPSSIGMLERIQTIAIYTSLLSG 261
L G++P N NL + L+ + G+ G + Q I + + L+
Sbjct: 177 TSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAF 235
Query: 262 PIPEEIGNCSELQNLYLYQNSISGPIPGRIGALSKLKSLLLWQNSLVGAIPDELGSCTEL 321
+ ++G L L L N I G +P + L L SL + N+L G IP + G+
Sbjct: 236 DL-GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRF 293
Query: 322 TVVDFSDN 329
V +++N
Sbjct: 294 DVSAYANN 301
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 110/237 (46%), Gaps = 26/237 (10%)
Query: 479 IPSEMGNLKHLNFVDMSE-NHLVGGIPPSVVGCQSLEFLDLHSNGLTGSVPDTLP--TSL 535
IPS + NL +LNF+ + N+LVG IPP++ L +L + ++G++PD L +L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 536 QLVDLSDNRLSGSLAHSIGSLTEXXXXXXXXNQLSGRIPAEILSCRKLIL-LDIGNNRFS 594
+D S N LSG+L SI SL N++SG IP S KL + I NR +
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 595 GEIPKELGQXXXXXXXXXXXXXQFSGEI---------------PSEFSGLTKLGI----- 634
G+IP + + S L K+G+
Sbjct: 188 GKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLN 247
Query: 635 -LDLSHNKLSGDL-DALASLQNLVSLNVSFNDFSGELPNTPFFRKLPLSDLASNRGL 689
LDL +N++ G L L L+ L SLNVSFN+ GE+P ++ +S A+N+ L
Sbjct: 248 GLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCL 304
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 102/245 (41%), Gaps = 28/245 (11%)
Query: 262 PIPEEIGNCSELQNLYLYQ-NSISGPIPGRIGALSKLKSLLLWQNSLVGAIPDELGSCTE 320
PIP + N L LY+ N++ GPIP I L++L L + ++ GAIPD L
Sbjct: 67 PIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKT 126
Query: 321 LTVVDFSDNLLTGSIPRSFGNLLKLQELQLSVNQLSGTIPIEIATCTALTHLEIDNNAIS 380
L +DFS N LSGT+P I++ L + D N IS
Sbjct: 127 LVTLDFS------------------------YNALSGTLPPSISSLPNLVGITFDGNRIS 162
Query: 381 GEIPADIGNINGL-TLFFAWKNKLTGNIPESLSQCQELQALDFSYNNLSGPIPKEIFGXX 439
G IP G+ + L T +N+LTG IP + + L +D S N L G +FG
Sbjct: 163 GAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDA-SVLFGSD 220
Query: 440 XXXXXXXXXXXXXGFIPPDIGNCTTXXXXXXXXXXXSGTIPSEMGNLKHLNFVDMSENHL 499
F +G GT+P + LK L+ +++S N+L
Sbjct: 221 KNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNL 280
Query: 500 VGGIP 504
G IP
Sbjct: 281 CGEIP 285
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 99/243 (40%), Gaps = 28/243 (11%)
Query: 335 IPRSFGNLLKLQELQLS-VNQLSGTIPIEIATCTALTHLEIDNNAISGEIPADIGNINGL 393
IP S NL L L + +N L G IP IA T L +L I + +SG IP + I L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 394 -TLFFAWKNKLTGNIPESLSQCQELQALDFSYNNLSGPIPKEIFGXXXXXXXXXXXXXXX 452
TL F++ N L+G +P S+S L + F N +SG IP +G
Sbjct: 128 VTLDFSY-NALSGTLPPSISSLPNLVGITFDGNRISGAIPDS-YGSFSKL---------- 175
Query: 453 GFIPPDIGNCTTXXXXXXXXXXXSGTIPSEMGNLKHLNFVDMSENHLVGGIPPSVVGCQS 512
+G IP NL +L FVD+S N L G ++
Sbjct: 176 ------------FTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKN 222
Query: 513 LEFLDLHSNGLTGSVPDT-LPTSLQLVDLSDNRLSGSLAHSIGSLTEXXXXXXXXNQLSG 571
+ + L N L + L +L +DL +NR+ G+L + L N L G
Sbjct: 223 TQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCG 282
Query: 572 RIP 574
IP
Sbjct: 283 EIP 285
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 90.9 bits (224), Expect = 3e-18, Method: Composition-based stats.
Identities = 72/221 (32%), Positives = 106/221 (47%), Gaps = 28/221 (12%)
Query: 773 VIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNK 832
V+G G+ GVV + + +A+K++ S E AF E++ L + H NIV+L +G+
Sbjct: 15 VVGRGAFGVVCKAKW-RAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKL--YGACL 71
Query: 833 NLKLLFYDYLPNGSLSSLLHGA-------GKGGADWEARYEVVLGVAHALAYLHHDCMPP 885
N L +Y GSL ++LHGA W L + +AYLH
Sbjct: 72 NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQPKA 125
Query: 886 ILHGDVKAMNVLLGPGYQAY-LADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
++H D+K N+LL G + DFG A D TN + GS +MAPE
Sbjct: 126 LIHRDLKPPNLLLVAGGTVLKICDFGTA------CDIQTHMTNNK----GSAAWMAPEVF 175
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQW 985
+EK DV+S+G++L EV+T R P D + G A + W
Sbjct: 176 EGSNYSEKCDVFSWGIILWEVITRRKPFD-EIGGPAFRIMW 215
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 90.9 bits (224), Expect = 4e-18, Method: Composition-based stats.
Identities = 72/221 (32%), Positives = 106/221 (47%), Gaps = 28/221 (12%)
Query: 773 VIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNK 832
V+G G+ GVV + + +A+K++ S E AF E++ L + H NIV+L +G+
Sbjct: 16 VVGRGAFGVVCKAKW-RAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKL--YGACL 72
Query: 833 NLKLLFYDYLPNGSLSSLLHGA-------GKGGADWEARYEVVLGVAHALAYLHHDCMPP 885
N L +Y GSL ++LHGA W L + +AYLH
Sbjct: 73 NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQPKA 126
Query: 886 ILHGDVKAMNVLLGPGYQAY-LADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
++H D+K N+LL G + DFG A D TN + GS +MAPE
Sbjct: 127 LIHRDLKPPNLLLVAGGTVLKICDFGTA------CDIQTHMTNNK----GSAAWMAPEVF 176
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQW 985
+EK DV+S+G++L EV+T R P D + G A + W
Sbjct: 177 EGSNYSEKCDVFSWGIILWEVITRRKPFD-EIGGPAFRIMW 216
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 103/221 (46%), Gaps = 37/221 (16%)
Query: 767 NLTSANVIGTGSSGVVYR-------------VTIPNGETLAVKKMWSSDESGAFSSEIQT 813
+T IG+GS G VY+ VT P + L AF +E+
Sbjct: 13 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQ-----------AFKNEVGV 61
Query: 814 LGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAH 873
L RH NI+ +G+ + L ++ + SL LH A + + + ++ A
Sbjct: 62 LRKTRHVNILLFMGYSTKPQLAIV-TQWCEGSSLYHHLH-ASETKFEMKKLIDIARQTAR 119
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YLH I+H D+K+ N+ L + DFGLA + S S ++Q QL+
Sbjct: 120 GMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKS-----RWSGSHQFEQLS 171
Query: 934 GSYGYMAPEHASMQR---ITEKSDVYSFGVVLLEVLTGRHP 971
GS +MAPE MQ + +SDVY+FG+VL E++TG+ P
Sbjct: 172 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 37/221 (16%)
Query: 767 NLTSANVIGTGSSGVVYR-------------VTIPNGETLAVKKMWSSDESGAFSSEIQT 813
+T IG+GS G VY+ VT P + L AF +E+
Sbjct: 25 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQ-----------AFKNEVGV 73
Query: 814 LGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAH 873
L RH NI+ +G+ + L ++ + SL LH A + + + ++ A
Sbjct: 74 LRKTRHVNILLFMGYSTKPQLAIV-TQWCEGSSLYHHLH-ASETKFEMKKLIDIARQTAR 131
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YLH I+H D+K+ N+ L + DFGLA + S ++Q QL+
Sbjct: 132 GMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLA-----TEKSRWSGSHQFEQLS 183
Query: 934 GSYGYMAPEHASMQR---ITEKSDVYSFGVVLLEVLTGRHP 971
GS +MAPE MQ + +SDVY+FG+VL E++TG+ P
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 15/203 (7%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMW--SSDESGAFSSEIQTLGSIRHKNIVRLLGWGSN 831
IG+GS G VY+ + + K+ + ++ AF +E+ L RH NI+ +G+ +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK 103
Query: 832 KNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDV 891
NL ++ + SL LH ++ ++ A + YLH I+H D+
Sbjct: 104 DNLAIV-TQWCEGSSLYKHLHVQETKFQMFQL-IDIARQTAQGMDYLH---AKNIIHRDM 158
Query: 892 KAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQR--- 948
K+ N+ L G + DFGLA + S S + Q Q GS +MAPE MQ
Sbjct: 159 KSNNIFLHEGLTVKIGDFGLATVKS-----RWSGSQQVEQPTGSVLWMAPEVIRMQDNNP 213
Query: 949 ITEKSDVYSFGVVLLEVLTGRHP 971
+ +SDVYS+G+VL E++TG P
Sbjct: 214 FSFQSDVYSYGIVLYELMTGELP 236
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 104/227 (45%), Gaps = 49/227 (21%)
Query: 767 NLTSANVIGTGSSGVVYR-------------VTIPNGETLAVKKMWSSDESGAFSSEIQT 813
+T IG+GS G VY+ VT P + L AF +E+
Sbjct: 14 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQ-----------AFKNEVGV 62
Query: 814 LGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGV-- 871
L RH NI+ +G+ + L ++ + SL LH E ++E++ +
Sbjct: 63 LRKTRHVNILLFMGYSTKPQLAIV-TQWCEGSSLYHHLHII-------ETKFEMIKLIDI 114
Query: 872 ----AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927
A + YLH I+H D+K+ N+ L + DFGLA + S S ++
Sbjct: 115 ARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS-----RWSGSH 166
Query: 928 QRPQLAGSYGYMAPEHASMQR---ITEKSDVYSFGVVLLEVLTGRHP 971
Q QL+GS +MAPE MQ + +SDVY+FG+VL E++TG+ P
Sbjct: 167 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 104/227 (45%), Gaps = 49/227 (21%)
Query: 767 NLTSANVIGTGSSGVVYR-------------VTIPNGETLAVKKMWSSDESGAFSSEIQT 813
+T IG+GS G VY+ VT P + L AF +E+
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQ-----------AFKNEVGV 57
Query: 814 LGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGV-- 871
L RH NI+ +G+ + L ++ + SL LH E ++E++ +
Sbjct: 58 LRKTRHVNILLFMGYSTKPQLAIV-TQWCEGSSLYHHLHII-------ETKFEMIKLIDI 109
Query: 872 ----AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927
A + YLH I+H D+K+ N+ L + DFGLA + S S ++
Sbjct: 110 ARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKS-----RWSGSH 161
Query: 928 QRPQLAGSYGYMAPEHASMQR---ITEKSDVYSFGVVLLEVLTGRHP 971
Q QL+GS +MAPE MQ + +SDVY+FG+VL E++TG+ P
Sbjct: 162 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 104/227 (45%), Gaps = 49/227 (21%)
Query: 767 NLTSANVIGTGSSGVVYR-------------VTIPNGETLAVKKMWSSDESGAFSSEIQT 813
+T IG+GS G VY+ VT P + L AF +E+
Sbjct: 14 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQ-----------AFKNEVGV 62
Query: 814 LGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGV-- 871
L RH NI+ +G+ + L ++ + SL LH E ++E++ +
Sbjct: 63 LRKTRHVNILLFMGYSTKPQLAIV-TQWCEGSSLYHHLHII-------ETKFEMIKLIDI 114
Query: 872 ----AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927
A + YLH I+H D+K+ N+ L + DFGLA + S S ++
Sbjct: 115 ARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS-----RWSGSH 166
Query: 928 QRPQLAGSYGYMAPEHASMQR---ITEKSDVYSFGVVLLEVLTGRHP 971
Q QL+GS +MAPE MQ + +SDVY+FG+VL E++TG+ P
Sbjct: 167 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 104/227 (45%), Gaps = 49/227 (21%)
Query: 767 NLTSANVIGTGSSGVVYR-------------VTIPNGETLAVKKMWSSDESGAFSSEIQT 813
+T IG+GS G VY+ VT P + L AF +E+
Sbjct: 11 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQ-----------AFKNEVGV 59
Query: 814 LGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGV-- 871
L RH NI+ +G+ + L ++ + SL LH E ++E++ +
Sbjct: 60 LRKTRHVNILLFMGYSTKPQLAIV-TQWCEGSSLYHHLHII-------ETKFEMIKLIDI 111
Query: 872 ----AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927
A + YLH I+H D+K+ N+ L + DFGLA + S S ++
Sbjct: 112 ARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS-----RWSGSH 163
Query: 928 QRPQLAGSYGYMAPEHASMQR---ITEKSDVYSFGVVLLEVLTGRHP 971
Q QL+GS +MAPE MQ + +SDVY+FG+VL E++TG+ P
Sbjct: 164 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 104/227 (45%), Gaps = 49/227 (21%)
Query: 767 NLTSANVIGTGSSGVVYR-------------VTIPNGETLAVKKMWSSDESGAFSSEIQT 813
+T IG+GS G VY+ VT P + L AF +E+
Sbjct: 36 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQ-----------AFKNEVGV 84
Query: 814 LGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGV-- 871
L RH NI+ +G+ + L ++ + SL LH E ++E++ +
Sbjct: 85 LRKTRHVNILLFMGYSTKPQLAIV-TQWCEGSSLYHHLHII-------ETKFEMIKLIDI 136
Query: 872 ----AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927
A + YLH I+H D+K+ N+ L + DFGLA + S S ++
Sbjct: 137 ARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS-----RWSGSH 188
Query: 928 QRPQLAGSYGYMAPEHASMQR---ITEKSDVYSFGVVLLEVLTGRHP 971
Q QL+GS +MAPE MQ + +SDVY+FG+VL E++TG+ P
Sbjct: 189 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 104/227 (45%), Gaps = 49/227 (21%)
Query: 767 NLTSANVIGTGSSGVVYR-------------VTIPNGETLAVKKMWSSDESGAFSSEIQT 813
+T IG+GS G VY+ VT P + L AF +E+
Sbjct: 37 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQ-----------AFKNEVGV 85
Query: 814 LGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGV-- 871
L RH NI+ +G+ + L ++ + SL LH E ++E++ +
Sbjct: 86 LRKTRHVNILLFMGYSTKPQLAIV-TQWCEGSSLYHHLHII-------ETKFEMIKLIDI 137
Query: 872 ----AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927
A + YLH I+H D+K+ N+ L + DFGLA + S S ++
Sbjct: 138 ARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS-----RWSGSH 189
Query: 928 QRPQLAGSYGYMAPEHASMQR---ITEKSDVYSFGVVLLEVLTGRHP 971
Q QL+GS +MAPE MQ + +SDVY+FG+VL E++TG+ P
Sbjct: 190 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 37/221 (16%)
Query: 767 NLTSANVIGTGSSGVVYR-------------VTIPNGETLAVKKMWSSDESGAFSSEIQT 813
+T IG+GS G VY+ VT P + L AF +E+
Sbjct: 25 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQ-----------AFKNEVGV 73
Query: 814 LGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAH 873
L RH NI+ +G+ + L ++ + SL LH A + + + ++ A
Sbjct: 74 LRKTRHVNILLFMGYSTAPQLAIV-TQWCEGSSLYHHLH-ASETKFEMKKLIDIARQTAR 131
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YLH I+H D+K+ N+ L + DFGLA + S ++Q QL+
Sbjct: 132 GMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLA-----TEKSRWSGSHQFEQLS 183
Query: 934 GSYGYMAPEHASMQR---ITEKSDVYSFGVVLLEVLTGRHP 971
GS +MAPE MQ + +SDVY+FG+VL E++TG+ P
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 104/227 (45%), Gaps = 49/227 (21%)
Query: 767 NLTSANVIGTGSSGVVYR-------------VTIPNGETLAVKKMWSSDESGAFSSEIQT 813
+T IG+GS G VY+ VT P + L AF +E+
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQ-----------AFKNEVGV 57
Query: 814 LGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGV-- 871
L RH NI+ +G+ + L ++ + SL LH E ++E++ +
Sbjct: 58 LRKTRHVNILLFMGYSTAPQLAIV-TQWCEGSSLYHHLHII-------ETKFEMIKLIDI 109
Query: 872 ----AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927
A + YLH I+H D+K+ N+ L + DFGLA + S S ++
Sbjct: 110 ARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKS-----RWSGSH 161
Query: 928 QRPQLAGSYGYMAPEHASMQR---ITEKSDVYSFGVVLLEVLTGRHP 971
Q QL+GS +MAPE MQ + +SDVY+FG+VL E++TG+ P
Sbjct: 162 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 80.5 bits (197), Expect = 5e-15, Method: Composition-based stats.
Identities = 72/238 (30%), Positives = 109/238 (45%), Gaps = 32/238 (13%)
Query: 773 VIGTGSSGVVYRV-TIPNGETLAVKKM------WSSDESGAFSSEIQTLGSIRHKNIVRL 825
VIG+G++ VV P E +A+K++ S DE EIQ + H NIV
Sbjct: 17 VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDE---LLKEIQAMSQCHHPNIVSY 73
Query: 826 LGWGSNKNLKLLFYDYLPNGSLSSLLH-----GAGKGGADWEARYEVVL-GVAHALAYLH 879
K+ L L GS+ ++ G K G E+ +L V L YLH
Sbjct: 74 YTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH 133
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+ +H DVKA N+LLG +ADFG++ ++ GD ++ R G+ +M
Sbjct: 134 KNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGD--ITRNKVRKTFVGTPCWM 188
Query: 940 APEHASMQRITE-KSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLMLNLE 996
APE R + K+D++SFG+ +E+ T G AP ++ P+ LML L+
Sbjct: 189 APEVMEQVRGYDFKADIWSFGITAIELAT----------GAAPYHKYPPMKVLMLTLQ 236
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 109/239 (45%), Gaps = 32/239 (13%)
Query: 772 NVIGTGSSGVVYRV-TIPNGETLAVKKM------WSSDESGAFSSEIQTLGSIRHKNIVR 824
VIG+G++ VV P E +A+K++ S DE EIQ + H NIV
Sbjct: 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDE---LLKEIQAMSQCHHPNIVS 77
Query: 825 LLGWGSNKNLKLLFYDYLPNGSLSSLLH-----GAGKGGADWEARYEVVLG-VAHALAYL 878
K+ L L GS+ ++ G K G E+ +L V L YL
Sbjct: 78 YYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL 137
Query: 879 HHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGY 938
H + +H DVKA N+LLG +ADFG++ ++ GD ++ R G+ +
Sbjct: 138 HKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGD--ITRNKVRKTFVGTPCW 192
Query: 939 MAPEHASMQRITE-KSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLMLNLE 996
MAPE R + K+D++SFG+ +E+ T G AP ++ P+ LML L+
Sbjct: 193 MAPEVMEQVRGYDFKADIWSFGITAIELAT----------GAAPYHKYPPMKVLMLTLQ 241
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 103/227 (45%), Gaps = 49/227 (21%)
Query: 767 NLTSANVIGTGSSGVVYR-------------VTIPNGETLAVKKMWSSDESGAFSSEIQT 813
+T IG+GS G VY+ VT P + L AF +E+
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQ-----------AFKNEVGV 57
Query: 814 LGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGV-- 871
L RH NI+ +G+ + L ++ + SL LH E ++E++ +
Sbjct: 58 LRKTRHVNILLFMGYSTKPQLAIV-TQWCEGSSLYHHLHII-------ETKFEMIKLIDI 109
Query: 872 ----AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927
A + YLH I+H D+K+ N+ L + DFGLA + S ++
Sbjct: 110 ARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA-----TEKSRWSGSH 161
Query: 928 QRPQLAGSYGYMAPEHASMQR---ITEKSDVYSFGVVLLEVLTGRHP 971
Q QL+GS +MAPE MQ + +SDVY+FG+VL E++TG+ P
Sbjct: 162 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 79.7 bits (195), Expect = 7e-15, Method: Composition-based stats.
Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 17/219 (7%)
Query: 767 NLTSANVIGTGSSGVVYRVT-IPNGETLAVKKMWSSDESG--AFSSEIQTLGSIRHKNIV 823
+L V+G G G +VT GE + +K++ DE F E++ + + H N++
Sbjct: 11 DLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVL 70
Query: 824 RLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDC 882
+ +G +K L + +Y+ G+L ++ W R +A +AYLH
Sbjct: 71 KFIGVLYKDKRLNFI-TEYIKGGTLRGIIKSM-DSQYPWSQRVSFAKDIASGMAYLHS-- 126
Query: 883 MPPILHGDVKAMNVLLGPGYQAYLADFGLARIV-----SGSGDDNCSKTN--QRPQLAGS 935
I+H D+ + N L+ +ADFGLAR++ G + K + +R + G+
Sbjct: 127 -MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGN 185
Query: 936 YGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974
+MAPE + + EK DV+SFG+VL E++ GR DP
Sbjct: 186 PYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNADP 223
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 103/227 (45%), Gaps = 49/227 (21%)
Query: 767 NLTSANVIGTGSSGVVYR-------------VTIPNGETLAVKKMWSSDESGAFSSEIQT 813
+T IG+GS G VY+ VT P + L AF +E+
Sbjct: 29 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQ-----------AFKNEVGV 77
Query: 814 LGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGV-- 871
L RH NI+ +G+ + L ++ + SL LH E ++E++ +
Sbjct: 78 LRKTRHVNILLFMGYSTKPQLAIV-TQWCEGSSLYHHLHII-------ETKFEMIKLIDI 129
Query: 872 ----AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927
A + YLH I+H D+K+ N+ L + DFGLA + S ++
Sbjct: 130 ARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-----TEKSRWSGSH 181
Query: 928 QRPQLAGSYGYMAPEHASMQR---ITEKSDVYSFGVVLLEVLTGRHP 971
Q QL+GS +MAPE MQ + +SDVY+FG+VL E++TG+ P
Sbjct: 182 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 102/227 (44%), Gaps = 49/227 (21%)
Query: 767 NLTSANVIGTGSSGVVYR-------------VTIPNGETLAVKKMWSSDESGAFSSEIQT 813
+T IG+GS G VY+ VT P + L AF +E+
Sbjct: 37 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQ-----------AFKNEVGV 85
Query: 814 LGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVV----- 868
L RH NI+ +G+ + L ++ + SL LH E ++E++
Sbjct: 86 LRKTRHVNILLFMGYSTKPQLAIV-TQWCEGSSLYHHLHII-------ETKFEMIKLIDI 137
Query: 869 -LGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927
A + YLH I+H D+K+ N+ L + DFGLA + S ++
Sbjct: 138 ARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-----TEKSRWSGSH 189
Query: 928 QRPQLAGSYGYMAPEHASMQR---ITEKSDVYSFGVVLLEVLTGRHP 971
Q QL+GS +MAPE MQ + +SDVY+FG+VL E++TG+ P
Sbjct: 190 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 77.8 bits (190), Expect = 3e-14, Method: Composition-based stats.
Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 16/207 (7%)
Query: 773 VIGTGSSG-VVY-RVTIPNGETL-----AVKKMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
+IG+G SG V Y R+ +P + A+K ++ + F SE +G H NI+RL
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL 115
Query: 826 LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPP 885
G + L ++ +Y+ NGSL + L G ++ GV + YL
Sbjct: 116 EGVVTRGRLAMIVTEYMENGSLDTFLR-THDGQFTIMQLVGMLRGVGAGMRYLSD---LG 171
Query: 886 ILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHAS 945
+H D+ A NVL+ ++DFGL+R++ D + T + + + APE +
Sbjct: 172 YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIR----WTAPEAIA 227
Query: 946 MQRITEKSDVYSFGVVLLEVLT-GRHP 971
+ + SDV+SFGVV+ EVL G P
Sbjct: 228 FRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 77.8 bits (190), Expect = 3e-14, Method: Composition-based stats.
Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 16/207 (7%)
Query: 773 VIGTGSSG-VVY-RVTIPNGETL-----AVKKMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
+IG+G SG V Y R+ +P + A+K ++ + F SE +G H NI+RL
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL 115
Query: 826 LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPP 885
G + L ++ +Y+ NGSL + L G ++ GV + YL
Sbjct: 116 EGVVTRGRLAMIVTEYMENGSLDTFLR-THDGQFTIMQLVGMLRGVGAGMRYLSD---LG 171
Query: 886 ILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHAS 945
+H D+ A NVL+ ++DFGL+R++ D + T + + + APE +
Sbjct: 172 YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIR----WTAPEAIA 227
Query: 946 MQRITEKSDVYSFGVVLLEVLT-GRHP 971
+ + SDV+SFGVV+ EVL G P
Sbjct: 228 FRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 35/219 (15%)
Query: 774 IGTGSSGVVYR-VTIPNGETLAVKKMWSSDESGA---------FSSEIQTLGSIRHKNIV 823
IG G G+V++ + + +A+K + D G F E+ + ++ H NIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 824 RLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCM 883
+L +G N + +++P G L L W + ++L +A + Y+ +
Sbjct: 87 KL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHP-IKWSVKLRLMLDIALGIEYMQNQN- 142
Query: 884 PPILHGDVKAMNVLL-----GPGYQAYLADFGLAR--IVSGSGDDNCSKTNQRPQLAGSY 936
PPI+H D+++ N+ L A +ADFGL++ + S SG L G++
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSG------------LLGNF 190
Query: 937 GYMAPEH--ASMQRITEKSDVYSFGVVLLEVLTGRHPLD 973
+MAPE A + TEK+D YSF ++L +LTG P D
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 20/206 (9%)
Query: 774 IGTGSSGVVYRVTIPNGE-TLAVKKMWSSDESGA-----FSSEIQTLGSIRHKNIVRLLG 827
+G G G VY N + LA+K ++ + A E++ +RH NI+RL G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + L +Y P G++ L K A Y + +A+AL+Y H ++
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---KVI 130
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H D+K N+LLG + +ADFG + + +++R L G+ Y+ PE +
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRAALCGTLDYLPPEMIEGR 181
Query: 948 RITEKSDVYSFGVVLLEVLTGRHPLD 973
EK D++S GV+ E L G+ P +
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 774 IGTGSSGVVYRVTIPNGE-TLAVKKMWSSDESGA-----FSSEIQTLGSIRHKNIVRLLG 827
+G G G VY + LA+K ++ + A E++ +RH NI+RL G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + L +Y P G++ L K A Y + +A+AL+Y H ++
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSKR---VI 156
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H D+K N+LLG + +ADFG + S D+ L G+ Y+ PE +
Sbjct: 157 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDD---------LCGTLDYLPPEMIEGR 207
Query: 948 RITEKSDVYSFGVVLLEVLTGRHPLD 973
EK D++S GV+ E L G+ P +
Sbjct: 208 MHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 76.3 bits (186), Expect = 8e-14, Method: Composition-based stats.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 25/219 (11%)
Query: 765 VRNLTSANVIGTGSSGVV----YRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHK 820
++ L IG G G V YR G +AVK + + + AF +E + +RH
Sbjct: 5 MKELKLLQTIGKGEFGDVMLGDYR-----GNKVAVKCIKNDATAQAFLAEASVMTQLRHS 59
Query: 821 NIVRLLGWGSNKNLKL-LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
N+V+LLG + L + +Y+ GSL L G+ + + L V A+ YL
Sbjct: 60 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 119
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+ +H D+ A NVL+ A ++DFGL + S + D T + P +
Sbjct: 120 GN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-----TGKLP-----VKWT 166
Query: 940 APEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTLP 977
APE ++ + KSDV+SFG++L E+ + GR P P +P
Sbjct: 167 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPY-PRIP 204
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 774 IGTGSSGVVYRVTIPNGE-TLAVKKMWSSDESGA-----FSSEIQTLGSIRHKNIVRLLG 827
+G G G VY + LA+K ++ + A E++ +RH NI+RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + L +Y P G++ L K A Y + +A+AL+Y H ++
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 130
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H D+K N+LLG + +ADFG + S +R +L G+ Y+ PE +
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAPSS---------RRTELCGTLDYLPPEMIEGR 181
Query: 948 RITEKSDVYSFGVVLLEVLTGRHPLD 973
EK D++S GV+ E L G+ P +
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 76.3 bits (186), Expect = 8e-14, Method: Composition-based stats.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 25/219 (11%)
Query: 765 VRNLTSANVIGTGSSGVV----YRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHK 820
++ L IG G G V YR G +AVK + + + AF +E + +RH
Sbjct: 20 MKELKLLQTIGKGEFGDVMLGDYR-----GNKVAVKCIKNDATAQAFLAEASVMTQLRHS 74
Query: 821 NIVRLLGWGSNKNLKL-LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
N+V+LLG + L + +Y+ GSL L G+ + + L V A+ YL
Sbjct: 75 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 134
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+ +H D+ A NVL+ A ++DFGL + S + D T + P +
Sbjct: 135 GN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-----TGKLP-----VKWT 181
Query: 940 APEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTLP 977
APE ++ + KSDV+SFG++L E+ + GR P P +P
Sbjct: 182 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPY-PRIP 219
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 92/206 (44%), Gaps = 20/206 (9%)
Query: 774 IGTGSSGVVYRVTIPNGE-TLAVKKMWSSDESGA-----FSSEIQTLGSIRHKNIVRLLG 827
+G G G VY + LA+K ++ + A E++ +RH NI+RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + L +Y P G + L K A Y + +A+AL+Y H ++
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 135
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H D+K N+LLG + +ADFG + S +R L G+ Y+ PE +
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWSVHAPSS---------RRTTLCGTLDYLPPEMIEGR 186
Query: 948 RITEKSDVYSFGVVLLEVLTGRHPLD 973
EK D++S GV+ E L G+ P +
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 115/245 (46%), Gaps = 28/245 (11%)
Query: 741 NSFTADDTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVY--RVTIPNGETLAV--- 795
+F T+E +F+ + N++ V+G G G V R+ +P+ + ++V
Sbjct: 20 RTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 796 --KKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHG 853
K ++ + F E +G H NI+RL G + ++ +Y+ NGSL S L
Sbjct: 80 TLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK 139
Query: 854 AGKGGADWEARYEVV------LGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLA 907
+A++ V+ G+A + YL +H D+ A N+L+ ++
Sbjct: 140 H-------DAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVS 189
Query: 908 DFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
DFGLAR++ D + T + ++ + +PE + ++ T SDV+S+G+VL EV++
Sbjct: 190 DFGLARVL--EDDPEAAYTTRGGKIP--IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 968 -GRHP 971
G P
Sbjct: 246 YGERP 250
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 774 IGTGSSGVVYRVTIPNGE-TLAVKKMWSSDESGA-----FSSEIQTLGSIRHKNIVRLLG 827
+G G G VY + LA+K ++ + A E++ +RH NI+RL G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + L +Y P G++ L K A Y + +A+AL+Y H ++
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSKR---VI 156
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H D+K N+LLG + +ADFG + S +R L G+ Y+ PE +
Sbjct: 157 HRDIKPENLLLGSAGELKIADFGWSVHAPSS---------RRTTLCGTLDYLPPEMIEGR 207
Query: 948 RITEKSDVYSFGVVLLEVLTGRHPLD 973
EK D++S GV+ E L G+ P +
Sbjct: 208 MHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 101/230 (43%), Gaps = 31/230 (13%)
Query: 756 KLDFSIDDVVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGA-----FSSE 810
++DF+ LT +IG G G VYR E DE + E
Sbjct: 3 EIDFA------ELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQE 56
Query: 811 IQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLG 870
+ ++H NI+ L G + L ++ G L+ +L G + D + V
Sbjct: 57 AKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK-RIPPDILVNWAV--Q 113
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQ--------AYLADFGLARIVSGSGDDN 922
+A + YLH + + PI+H D+K+ N+L+ + + DFGLAR
Sbjct: 114 IARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR--------E 165
Query: 923 CSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
+T + AG+Y +MAPE ++ SDV+S+GV+L E+LTG P
Sbjct: 166 WHRTTKM-SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMWSSDESG-AFSSEIQTLGSIRHKNIVRLLGWGSNK 832
+G G G V+ T +A+K + S AF E Q + +RH+ +V+L S +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 75
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ ++ +Y+ GSL L G ++ +A +AY+ +H D++
Sbjct: 76 PIXIV-TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 131
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
A N+L+G +ADFGLAR++ +DN Q + + APE A R T K
Sbjct: 132 AANILVGENLVCKVADFGLARLI----EDNEXTARQGAKFP--IKWTAPEAALYGRFTIK 185
Query: 953 SDVYSFGVVLLEVLT-GRHP 971
SDV+SFG++L E+ T GR P
Sbjct: 186 SDVWSFGILLTELTTKGRVP 205
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 17/180 (9%)
Query: 807 FSSEIQTLGSIRHKNIVRLLGWGSNKN----LKLLFYDYLPNGSLSSLLHGAGKGGADWE 862
F E Q ++ H IV + G + L + +Y+ +L ++H G +
Sbjct: 76 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP--K 133
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
EV+ AL + H + I+H DVK N+++ + DFG+AR ++ SG+
Sbjct: 134 RAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN-- 188
Query: 923 CSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPL 982
Q + G+ Y++PE A + +SDVYS G VL EVLTG +P G +P+
Sbjct: 189 --SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG----EPPFTGDSPV 242
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 774 IGTGSSGVVYRVTIPNGE-TLAVKKMWSSDESGA-----FSSEIQTLGSIRHKNIVRLLG 827
+G G G VY + LA+K ++ + A E++ +RH NI+RL G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + L +Y P G++ L K A Y + +A+AL+Y H ++
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 147
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H D+K N+LLG + +ADFG + S +R L G+ Y+ PE +
Sbjct: 148 HRDIKPENLLLGSAGELKIADFGWSVHAPSS---------RRTTLCGTLDYLPPEMIEGR 198
Query: 948 RITEKSDVYSFGVVLLEVLTGRHPLD 973
EK D++S GV+ E L G+ P +
Sbjct: 199 MHDEKVDLWSLGVLCYEFLVGKPPFE 224
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 62/200 (31%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLGWGSNK 832
+G G G V+ T +A+K + S AF E Q + IRH+ +V+L S +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSEE 85
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ ++ +Y+ GSL L G ++ +A +AY+ +H D++
Sbjct: 86 PIYIV-TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 141
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
A N+L+G +ADFGLAR++ +DN Q + + APE A R T K
Sbjct: 142 AANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFP--IKWTAPEAALYGRFTIK 195
Query: 953 SDVYSFGVVLLEVLT-GRHP 971
SDV+SFG++L E+ T GR P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMWSSDESG-AFSSEIQTLGSIRHKNIVRLLGWGSNK 832
+G G G V+ T +A+K + S AF E Q + +RH+ +V+L S +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ ++ +Y+ GSL L G ++ +A +AY+ +H D++
Sbjct: 86 PIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 141
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
A N+L+G +ADFGLAR++ +DN Q + + APE A R T K
Sbjct: 142 AANILVGENLVCKVADFGLARLI----EDNEXTARQGAKFP--IKWTAPEAALYGRFTIK 195
Query: 953 SDVYSFGVVLLEVLT-GRHP 971
SDV+SFG++L E+ T GR P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 53/180 (29%), Positives = 84/180 (46%), Gaps = 17/180 (9%)
Query: 807 FSSEIQTLGSIRHKNIVRLLGWGSNKN----LKLLFYDYLPNGSLSSLLHGAGKGGADWE 862
F E Q ++ H IV + G + L + +Y+ +L ++H G +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP--K 116
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
EV+ AL + H + I+H DVK N+L+ + DFG+AR ++ SG+
Sbjct: 117 RAIEVIADACQALNFSHQN---GIIHRDVKPANILISATNAVKVVDFGIARAIADSGN-- 171
Query: 923 CSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPL 982
Q + G+ Y++PE A + +SDVYS G VL EVLTG +P G +P+
Sbjct: 172 --SVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG----EPPFTGDSPV 225
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 92/206 (44%), Gaps = 20/206 (9%)
Query: 774 IGTGSSGVVYRVTIPNGE-TLAVKKMWSSDESGA-----FSSEIQTLGSIRHKNIVRLLG 827
+G G G VY + LA+K ++ + A E++ +RH NI+RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + L +Y P G + L K A Y + +A+AL+Y H ++
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 135
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H D+K N+LLG + +ADFG + S +R L G+ Y+ PE +
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWSVHAPSS---------RRXXLXGTLDYLPPEMIEGR 186
Query: 948 RITEKSDVYSFGVVLLEVLTGRHPLD 973
EK D++S GV+ E L G+ P +
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 12/209 (5%)
Query: 767 NLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRL 825
LT IG+G G+V+ N + +A+K + S F E + + + H +V+L
Sbjct: 28 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQL 87
Query: 826 LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPP 885
G + L ++++ +G LS L +G E + L V +AYL C
Sbjct: 88 YGVCLEQAPICLVFEFMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYLEEAC--- 143
Query: 886 ILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHAS 945
++H D+ A N L+G ++DFG+ R V D S T + + + +PE S
Sbjct: 144 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD--DQYTSSTGTKFPVK----WASPEVFS 197
Query: 946 MQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
R + KSDV+SFGV++ EV + G+ P +
Sbjct: 198 FSRYSSKSDVWSFGVLMWEVFSEGKIPYE 226
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 22/207 (10%)
Query: 774 IGTGSSGVVYRVTIPNGE-TLAVKKMWSSDESGA-----FSSEIQTLGSIRHKNIVRLLG 827
+G G G VY + LA+K ++ + A E++ +RH NI+RL G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + L +Y P G++ L K A Y + +A+AL+Y H ++
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 131
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNC-SKTNQRPQLAGSYGYMAPEHASM 946
H D+K N+LLG + +ADFG + C + +++R L+G+ Y+ PE
Sbjct: 132 HRDIKPENLLLGSAGELKIADFGWS----------CHAPSSRRTTLSGTLDYLPPEMIEG 181
Query: 947 QRITEKSDVYSFGVVLLEVLTGRHPLD 973
+ EK D++S GV+ E L G+ P +
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 17/180 (9%)
Query: 807 FSSEIQTLGSIRHKNIVRLLGWGSNKN----LKLLFYDYLPNGSLSSLLHGAGKGGADWE 862
F E Q ++ H IV + G + L + +Y+ +L ++H G +
Sbjct: 59 FRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP--K 116
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
EV+ AL + H + I+H DVK N+++ + DFG+AR ++ SG+
Sbjct: 117 RAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN-- 171
Query: 923 CSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPL 982
Q + G+ Y++PE A + +SDVYS G VL EVLTG +P G +P+
Sbjct: 172 --SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG----EPPFTGDSPV 225
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 115/245 (46%), Gaps = 28/245 (11%)
Query: 741 NSFTADDTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVY--RVTIPNGETLAV--- 795
+F T+E +F+ + N++ V+G G G V R+ +P+ + ++V
Sbjct: 20 RTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 796 --KKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHG 853
K ++ + F E +G H NI+RL G + ++ +Y+ NGSL S L
Sbjct: 80 TLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK 139
Query: 854 AGKGGADWEARYEVV------LGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLA 907
+A++ V+ G+A + YL +H D+ A N+L+ ++
Sbjct: 140 H-------DAQFTVIQLVGMLRGIASGMKYLSD---MGFVHRDLAARNILINSNLVCKVS 189
Query: 908 DFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
DFGL+R++ D + T + ++ + +PE + ++ T SDV+S+G+VL EV++
Sbjct: 190 DFGLSRVL--EDDPEAAYTTRGGKIP--IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 968 -GRHP 971
G P
Sbjct: 246 YGERP 250
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 35/219 (15%)
Query: 774 IGTGSSGVVYR-VTIPNGETLAVKKMWSSDESGA---------FSSEIQTLGSIRHKNIV 823
IG G G+V++ + + +A+K + D G F E+ + ++ H NIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 824 RLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCM 883
+L +G N + +++P G L L W + ++L +A + Y+ +
Sbjct: 87 KL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHP-IKWSVKLRLMLDIALGIEYMQNQN- 142
Query: 884 PPILHGDVKAMNVLL-----GPGYQAYLADFGLAR--IVSGSGDDNCSKTNQRPQLAGSY 936
PPI+H D+++ N+ L A +ADFG ++ + S SG L G++
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSG------------LLGNF 190
Query: 937 GYMAPEH--ASMQRITEKSDVYSFGVVLLEVLTGRHPLD 973
+MAPE A + TEK+D YSF ++L +LTG P D
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 774 IGTGSSGVVYRVTIPNGE-TLAVKKMWSSDESGA-----FSSEIQTLGSIRHKNIVRLLG 827
+G G G VY + LA+K ++ + A E++ +RH NI+RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + L +Y P G++ L K A Y + +A+AL+Y H ++
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 133
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H D+K N+LLG + +ADFG + S +R L G+ Y+ PE +
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWSVHAPSS---------RRTTLCGTLDYLPPEMIEGR 184
Query: 948 RITEKSDVYSFGVVLLEVLTGRHPLD 973
EK D++S GV+ E L G+ P +
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLGWGSNK 832
+G G G V+ T +A+K + S AF E Q + +RH+ +V+L S +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ ++ +Y+ GSL L G ++ +A +AY+ +H D++
Sbjct: 86 PIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 141
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
A N+L+G +ADFGLAR++ +DN Q + + APE A R T K
Sbjct: 142 AANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFP--IKWTAPEAALYGRFTIK 195
Query: 953 SDVYSFGVVLLEVLT-GRHP 971
SDV+SFG++L E+ T GR P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 774 IGTGSSGVVYRVTIPNGE-TLAVKKMWSSDESGA-----FSSEIQTLGSIRHKNIVRLLG 827
+G G G VY + LA+K ++ + A E++ +RH NI+RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + L +Y P G++ L K A Y + +A+AL+Y H ++
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 130
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H D+K N+LLG + +ADFG + S +R L G+ Y+ PE +
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAPSS---------RRTDLCGTLDYLPPEMIEGR 181
Query: 948 RITEKSDVYSFGVVLLEVLTGRHPLD 973
EK D++S GV+ E L G+ P +
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 774 IGTGSSGVVYRVTIPNGE-TLAVKKMWSSDESGA-----FSSEIQTLGSIRHKNIVRLLG 827
+G G G VY + LA+K ++ + A E++ +RH NI+RL G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + L +Y P G++ L K A Y + +A+AL+Y H ++
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 131
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H D+K N+LLG + +ADFG + S +R L G+ Y+ PE +
Sbjct: 132 HRDIKPENLLLGSAGELKIADFGWSVHAPSS---------RRTDLCGTLDYLPPEMIEGR 182
Query: 948 RITEKSDVYSFGVVLLEVLTGRHPLD 973
EK D++S GV+ E L G+ P +
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 774 IGTGSSGVVYRVTIPNGE-TLAVKKMWSSDESGA-----FSSEIQTLGSIRHKNIVRLLG 827
+G G G VY + LA+K ++ + A E++ +RH NI+RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + L +Y P G++ L K A Y + +A+AL+Y H ++
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 130
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H D+K N+LLG + +ADFG + S +R L G+ Y+ PE +
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAPSS---------RRTDLCGTLDYLPPEMIEGR 181
Query: 948 RITEKSDVYSFGVVLLEVLTGRHPLD 973
EK D++S GV+ E L G+ P +
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 115/245 (46%), Gaps = 28/245 (11%)
Query: 741 NSFTADDTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVY--RVTIPNGETLAV--- 795
+F T+E +F+ + N++ V+G G G V R+ +P+ + ++V
Sbjct: 20 RTFVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 796 --KKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHG 853
K ++ + F E +G H NI+RL G + ++ +Y+ NGSL S L
Sbjct: 80 TLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK 139
Query: 854 AGKGGADWEARYEVV------LGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLA 907
+A++ V+ G+A + YL +H D+ A N+L+ ++
Sbjct: 140 H-------DAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVS 189
Query: 908 DFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
DFGL+R++ D + T + ++ + +PE + ++ T SDV+S+G+VL EV++
Sbjct: 190 DFGLSRVL--EDDPEAAYTTRGGKIP--IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 968 -GRHP 971
G P
Sbjct: 246 YGERP 250
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 774 IGTGSSGVVYRVTIPNGE-TLAVKKMWSSDESGA-----FSSEIQTLGSIRHKNIVRLLG 827
+G G G VY + LA+K ++ + A E++ +RH NI+RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + L +Y P G++ L K A Y + +A+AL+Y H ++
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 130
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H D+K N+LLG + +ADFG + S +R L G+ Y+ PE +
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAPSS---------RRTTLCGTLDYLPPEMIEGR 181
Query: 948 RITEKSDVYSFGVVLLEVLTGRHPLD 973
EK D++S GV+ E L G+ P +
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLGWGSNK 832
+G G G V+ T +A+K + S AF E Q + +RH+ +V+L S +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ ++ +Y+ GSL L G ++ +A +AY+ +H D++
Sbjct: 252 PIYIVT-EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 307
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
A N+L+G +ADFGLAR++ +DN Q + + APE A R T K
Sbjct: 308 AANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFP--IKWTAPEAALYGRFTIK 361
Query: 953 SDVYSFGVVLLEVLT-GRHP 971
SDV+SFG++L E+ T GR P
Sbjct: 362 SDVWSFGILLTELTTKGRVP 381
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLGWGSNK 832
+G G G V+ T +A+K + S AF E Q + +RH+ +V+L S +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 78
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ ++ +Y+ GSL L G ++ +A +AY+ +H D++
Sbjct: 79 PIYIV-TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 134
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
A N+L+G +ADFGLAR++ +DN Q + + APE A R T K
Sbjct: 135 AANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFP--IKWTAPEAALYGRFTIK 188
Query: 953 SDVYSFGVVLLEVLT-GRHP 971
SDV+SFG++L E+ T GR P
Sbjct: 189 SDVWSFGILLTELTTKGRVP 208
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 106/219 (48%), Gaps = 28/219 (12%)
Query: 767 NLTSANVIGTGSSGVVY--RVTIPNGETLAV-----KKMWSSDESGAFSSEIQTLGSIRH 819
N++ V+G G G V R+ +P+ + ++V K ++ + F E +G H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVV------LGVAH 873
NI+RL G + ++ +Y+ NGSL S L +A++ V+ G+A
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-------DAQFTVIQLVGMLRGIAS 129
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YL +H D+ A N+L+ ++DFGL+R++ D + T + ++
Sbjct: 130 GMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKIP 184
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
+ +PE + ++ T SDV+S+G+VL EV++ G P
Sbjct: 185 --IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 92/206 (44%), Gaps = 20/206 (9%)
Query: 774 IGTGSSGVVYRVTIPNGE-TLAVKKMWSSDESGA-----FSSEIQTLGSIRHKNIVRLLG 827
+G G G VY + LA+K ++ + A E++ +RH NI+RL G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + L +Y P G++ L K A Y + +A+AL+Y H ++
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 131
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H D+K N+LLG + +ADFG + S D L G+ Y+ PE +
Sbjct: 132 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT---------LCGTLDYLPPEMIEGR 182
Query: 948 RITEKSDVYSFGVVLLEVLTGRHPLD 973
EK D++S GV+ E L G+ P +
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 35/219 (15%)
Query: 774 IGTGSSGVVYR-VTIPNGETLAVKKMWSSDESGA---------FSSEIQTLGSIRHKNIV 823
IG G G+V++ + + +A+K + D G F E+ + ++ H NIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 824 RLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCM 883
+L +G N + +++P G L L W + ++L +A + Y+ +
Sbjct: 87 KL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHP-IKWSVKLRLMLDIALGIEYMQNQN- 142
Query: 884 PPILHGDVKAMNVLL-----GPGYQAYLADFGLAR--IVSGSGDDNCSKTNQRPQLAGSY 936
PPI+H D+++ N+ L A +ADF L++ + S SG L G++
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSG------------LLGNF 190
Query: 937 GYMAPEH--ASMQRITEKSDVYSFGVVLLEVLTGRHPLD 973
+MAPE A + TEK+D YSF ++L +LTG P D
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 774 IGTGSSGVVYRVTIPNGE-TLAVKKMWSSDESGA-----FSSEIQTLGSIRHKNIVRLLG 827
+G G G VY + LA+K ++ + A E++ +RH NI+RL G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + L +Y P G++ L K A Y + +A+AL+Y H ++
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 132
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H D+K N+LLG + +ADFG + S +R L G+ Y+ PE +
Sbjct: 133 HRDIKPENLLLGSAGELKIADFGWSVHAPSS---------RRXXLCGTLDYLPPEMIEGR 183
Query: 948 RITEKSDVYSFGVVLLEVLTGRHPLD 973
EK D++S GV+ E L G+ P +
Sbjct: 184 MHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 774 IGTGSSGVVYRVTIPNGE-TLAVKKMWSSDESGA-----FSSEIQTLGSIRHKNIVRLLG 827
+G G G VY + LA+K ++ + A E++ +RH NI+RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + L +Y P G++ L K A Y + +A+AL+Y H ++
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 133
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H D+K N+LLG + +ADFG + S D+ L G+ Y+ PE +
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDD---------LCGTLDYLPPEMIEGR 184
Query: 948 RITEKSDVYSFGVVLLEVLTGRHPLD 973
EK D++S GV+ E L G+ P +
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLGWGSNK 832
+G G G V+ T +A+K + S AF E Q + +RH+ +V+L S +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ ++ +Y+ GSL L G ++ +A +AY+ +H D++
Sbjct: 252 PIYIVT-EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 307
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
A N+L+G +ADFGLAR++ +DN Q + + APE A R T K
Sbjct: 308 AANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFP--IKWTAPEAALYGRFTIK 361
Query: 953 SDVYSFGVVLLEVLT-GRHP 971
SDV+SFG++L E+ T GR P
Sbjct: 362 SDVWSFGILLTELTTKGRVP 381
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 17/180 (9%)
Query: 807 FSSEIQTLGSIRHKNIVRLLGWGSNKN----LKLLFYDYLPNGSLSSLLHGAGKGGADWE 862
F E Q ++ H IV + G + L + +Y+ +L ++H G +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP--K 116
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
EV+ AL + H + I+H DVK N+++ + DFG+AR ++ SG+
Sbjct: 117 RAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN-- 171
Query: 923 CSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPL 982
Q + G+ Y++PE A + +SDVYS G VL EVLTG +P G +P+
Sbjct: 172 --SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG----EPPFTGDSPV 225
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 774 IGTGSSGVVYRVTIPNGE-TLAVKKMWSSDESGA-----FSSEIQTLGSIRHKNIVRLLG 827
+G G G VY + LA+K ++ + A E++ +RH NI+RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + L +Y P G++ L K A Y + +A+AL+Y H ++
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 135
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H D+K N+LLG + +ADFG + S +R L G+ Y+ PE +
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWSVHAPSS---------RRTTLCGTLDYLPPEMIEGR 186
Query: 948 RITEKSDVYSFGVVLLEVLTGRHPLD 973
EK D++S GV+ E L G+ P +
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 106/219 (48%), Gaps = 28/219 (12%)
Query: 767 NLTSANVIGTGSSGVVY--RVTIPNGETLAV-----KKMWSSDESGAFSSEIQTLGSIRH 819
N++ V+G G G V R+ +P+ + ++V K ++ + F E +G H
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 93
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVV------LGVAH 873
NI+RL G + ++ +Y+ NGSL S L +A++ V+ G+A
Sbjct: 94 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-------DAQFTVIQLVGMLRGIAS 146
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YL +H D+ A N+L+ ++DFGL+R++ D + T + ++
Sbjct: 147 GMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKIP 201
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
+ +PE + ++ T SDV+S+G+VL EV++ G P
Sbjct: 202 --IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 238
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 17/180 (9%)
Query: 807 FSSEIQTLGSIRHKNIVRLLGWGSNKN----LKLLFYDYLPNGSLSSLLHGAGKGGADWE 862
F E Q ++ H IV + G + L + +Y+ +L ++H G +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP--K 116
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
EV+ AL + H + I+H DVK N+++ + DFG+AR ++ SG+
Sbjct: 117 RAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN-- 171
Query: 923 CSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPL 982
Q + G+ Y++PE A + +SDVYS G VL EVLTG +P G +P+
Sbjct: 172 --SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG----EPPFTGDSPV 225
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 774 IGTGSSGVVYRVTIPNGE-TLAVKKMWSSDESGA-----FSSEIQTLGSIRHKNIVRLLG 827
+G G G VY + LA+K ++ + A E++ +RH NI+RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + L +Y P G++ L K A Y + +A+AL+Y H ++
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 135
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H D+K N+LLG + +ADFG + S +R L G+ Y+ PE +
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWSVHAPSS---------RRTDLCGTLDYLPPEMIEGR 186
Query: 948 RITEKSDVYSFGVVLLEVLTGRHPLD 973
EK D++S GV+ E L G+ P +
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 115/245 (46%), Gaps = 28/245 (11%)
Query: 741 NSFTADDTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVY--RVTIPNGETLAV--- 795
+F T+E +F+ + N++ V+G G G V R+ +P+ + ++V
Sbjct: 20 RTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 796 --KKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHG 853
K ++ + F E +G H NI+RL G + ++ +Y+ NGSL S L
Sbjct: 80 TLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK 139
Query: 854 AGKGGADWEARYEVV------LGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLA 907
+A++ V+ G+A + YL +H D+ A N+L+ ++
Sbjct: 140 H-------DAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVS 189
Query: 908 DFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
DFGL+R++ D + T + ++ + +PE + ++ T SDV+S+G+VL EV++
Sbjct: 190 DFGLSRVL--EDDPEAAYTTRGGKIP--IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 968 -GRHP 971
G P
Sbjct: 246 YGERP 250
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 774 IGTGSSGVVYRVTIPNGE-TLAVKKMWSSDESGA-----FSSEIQTLGSIRHKNIVRLLG 827
+G G G VY + LA+K ++ + A E++ +RH NI+RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + L +Y P G++ L K A Y + +A+AL+Y H ++
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 133
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H D+K N+LLG + +ADFG + S +R L G+ Y+ PE +
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWSVHAPSS---------RRAALCGTLDYLPPEMIEGR 184
Query: 948 RITEKSDVYSFGVVLLEVLTGRHPLD 973
EK D++S GV+ E L G+ P +
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 13/175 (7%)
Query: 807 FSSEIQTLGSIRHKNIVRLLGWGSNKN----LKLLFYDYLPNGSLSSLLHGAGKGGADWE 862
F E Q ++ H IV + G + L + +Y+ +L ++H G +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP--K 116
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
EV+ AL + H + I+H DVK N+++ + DFG+AR ++ SG+
Sbjct: 117 RAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN-- 171
Query: 923 CSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
Q + G+ Y++PE A + +SDVYS G VL EVLTG P P
Sbjct: 172 --SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 74.7 bits (182), Expect = 3e-13, Method: Composition-based stats.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLGWGSNK 832
+G G G V+ T +A+K + S AF E Q + +RH+ +V+L S +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 74
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ ++ +Y+ GSL L G ++ +A +AY+ +H D++
Sbjct: 75 PIYIV-TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 130
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
A N+L+G +ADFGLAR++ +DN Q + + APE A R T K
Sbjct: 131 AANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFP--IKWTAPEAALYGRFTIK 184
Query: 953 SDVYSFGVVLLEVLT-GRHP 971
SDV+SFG++L E+ T GR P
Sbjct: 185 SDVWSFGILLTELTTKGRVP 204
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 74.7 bits (182), Expect = 3e-13, Method: Composition-based stats.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLGWGSNK 832
+G G G V+ T +A+K + S AF E Q + +RH+ +V+L S +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 76
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ ++ +Y+ GSL L G ++ +A +AY+ +H D++
Sbjct: 77 PIYIV-TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 132
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
A N+L+G +ADFGLAR++ +DN Q + + APE A R T K
Sbjct: 133 AANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFP--IKWTAPEAALYGRFTIK 186
Query: 953 SDVYSFGVVLLEVLT-GRHP 971
SDV+SFG++L E+ T GR P
Sbjct: 187 SDVWSFGILLTELTTKGRVP 206
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 74.7 bits (182), Expect = 3e-13, Method: Composition-based stats.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLGWGSNK 832
+G G G V+ T +A+K + S AF E Q + +RH+ +V+L S +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ ++ +Y+ GSL L G ++ +A +AY+ +H D++
Sbjct: 86 PIYIV-TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 141
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
A N+L+G +ADFGLAR++ +DN Q + + APE A R T K
Sbjct: 142 AANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFP--IKWTAPEAALYGRFTIK 195
Query: 953 SDVYSFGVVLLEVLT-GRHP 971
SDV+SFG++L E+ T GR P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 103/219 (47%), Gaps = 25/219 (11%)
Query: 765 VRNLTSANVIGTGSSGVV----YRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHK 820
++ L IG G G V YR G +AVK + + + AF +E + +RH
Sbjct: 192 MKELKLLQTIGKGEFGDVMLGDYR-----GNKVAVKCIKNDATAQAFLAEASVMTQLRHS 246
Query: 821 NIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
N+V+LLG K + +Y+ GSL L G+ + + L V A+ YL
Sbjct: 247 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 306
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+ +H D+ A NVL+ A ++DFGL + S + D T + P +
Sbjct: 307 GN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-----TGKLP-----VKWT 353
Query: 940 APEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTLP 977
APE ++ + KSDV+SFG++L E+ + GR P P +P
Sbjct: 354 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPY-PRIP 391
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 102/213 (47%), Gaps = 17/213 (7%)
Query: 768 LTSANVIGTGSSGVVYR--VTIPNGET---LAVKKM---WSSDESGAFSSEIQTLGSIRH 819
+T VIG G G VY+ + +G+ +A+K + ++ + F E +G H
Sbjct: 46 VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSH 105
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
NI+RL G S ++ +Y+ NG+L L G ++ G+A + YL
Sbjct: 106 HNIIRLEGVISKYKPMMIITEYMENGALDKFLR-EKDGEFSVLQLVGMLRGIAAGMKYLA 164
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+ +H D+ A N+L+ ++DFGL+R++ + + + + + +
Sbjct: 165 N---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIR----WT 217
Query: 940 APEHASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
APE S ++ T SDV+SFG+V+ EV+T G P
Sbjct: 218 APEAISYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 74.7 bits (182), Expect = 3e-13, Method: Composition-based stats.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 774 IGTGSSGVVYRVTIPNGE-TLAVKKMWSSDESGA-----FSSEIQTLGSIRHKNIVRLLG 827
+G G G VY + LA+K ++ + A E++ +RH NI+RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + L +Y P G++ L K A Y + +A+AL+Y H ++
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 135
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H D+K N+LLG + +ADFG + S +R L G+ Y+ PE +
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWSVHAPSS---------RRTTLCGTLDYLPPEXIEGR 186
Query: 948 RITEKSDVYSFGVVLLEVLTGRHPLD 973
EK D++S GV+ E L G+ P +
Sbjct: 187 XHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 106/219 (48%), Gaps = 28/219 (12%)
Query: 767 NLTSANVIGTGSSGVVY--RVTIPNGETLAV-----KKMWSSDESGAFSSEIQTLGSIRH 819
N++ V+G G G V R+ +P+ + ++V K ++ + F E +G H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVV------LGVAH 873
NI+RL G + ++ +Y+ NGSL S L +A++ V+ G+A
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-------DAQFTVIQLVGMLRGIAS 158
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YL +H D+ A N+L+ ++DFGL+R++ D + T + ++
Sbjct: 159 GMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKIP 213
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
+ +PE + ++ T SDV+S+G+VL EV++ G P
Sbjct: 214 --IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 114/245 (46%), Gaps = 28/245 (11%)
Query: 741 NSFTADDTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVY--RVTIPNGETLAV--- 795
+F T+E +F+ + N++ V+G G G V R+ +P+ + ++V
Sbjct: 20 RTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 796 --KKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHG 853
K ++ + F E +G H NI+RL G + ++ +Y+ NGSL S L
Sbjct: 80 TLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK 139
Query: 854 AGKGGADWEARYEVV------LGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLA 907
+A++ V+ G+A + YL +H D+ A N+L+ ++
Sbjct: 140 H-------DAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVS 189
Query: 908 DFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
DFGL R++ D + T + ++ + +PE + ++ T SDV+S+G+VL EV++
Sbjct: 190 DFGLGRVL--EDDPEAAYTTRGGKIP--IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 968 -GRHP 971
G P
Sbjct: 246 YGERP 250
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLGWGSNK 832
+G G G V+ T +A+K + S AF E Q + +RH+ +V+L S +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ ++ +Y+ GSL L G ++ +A +AY+ +H D++
Sbjct: 252 PIYIVG-EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 307
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
A N+L+G +ADFGLAR++ +DN Q + + APE A R T K
Sbjct: 308 AANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFP--IKWTAPEAALYGRFTIK 361
Query: 953 SDVYSFGVVLLEVLT-GRHP 971
SDV+SFG++L E+ T GR P
Sbjct: 362 SDVWSFGILLTELTTKGRVP 381
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 18/224 (8%)
Query: 758 DFSIDDVVRNLTSANVIGTGSSGVVYR--VTIPNGE--TLAVKKM---WSSDESGAFSSE 810
+F+ + V + VIG G G V R + P + +A+K + ++ + F SE
Sbjct: 8 EFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSE 67
Query: 811 IQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLG 870
+G H NI+RL G +N ++ +++ NG+L S L G ++ G
Sbjct: 68 ASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR-LNDGQFTVIQLVGMLRG 126
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+A + YL +H D+ A N+L+ ++DFGL+R + ++N S +
Sbjct: 127 IASGMRYLAEMSY---VHRDLAARNILVNSNLVCKVSDFGLSRFL----EENSSDPTETS 179
Query: 931 QLAGS--YGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
L G + APE + ++ T SD +S+G+V+ EV++ G P
Sbjct: 180 SLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLGWGSNK 832
+G G G V+ T +A+K + S AF E Q + +RH+ +V+L S +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ ++ +Y+ GSL L G ++ +A +AY+ +H D++
Sbjct: 86 PIYIVC-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 141
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
A N+L+G +ADFGLAR++ +DN Q + + APE A R T K
Sbjct: 142 AANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFP--IKWTAPEAALYGRFTIK 195
Query: 953 SDVYSFGVVLLEVLT-GRHP 971
SDV+SFG++L E+ T GR P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 106/219 (48%), Gaps = 28/219 (12%)
Query: 767 NLTSANVIGTGSSGVVY--RVTIPNGETLAV-----KKMWSSDESGAFSSEIQTLGSIRH 819
N++ V+G G G V R+ +P+ + ++V K ++ + F E +G H
Sbjct: 44 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 103
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVV------LGVAH 873
NI+RL G + ++ +Y+ NGSL S L +A++ V+ G+A
Sbjct: 104 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-------DAQFTVIQLVGMLRGIAS 156
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YL +H D+ A N+L+ ++DFGL+R++ D + T + ++
Sbjct: 157 GMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKIP 211
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
+ +PE + ++ T SDV+S+G+VL EV++ G P
Sbjct: 212 --IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 248
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 106/219 (48%), Gaps = 28/219 (12%)
Query: 767 NLTSANVIGTGSSGVVY--RVTIPNGETLAV-----KKMWSSDESGAFSSEIQTLGSIRH 819
N++ V+G G G V R+ +P+ + ++V K ++ + F E +G H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVV------LGVAH 873
NI+RL G + ++ +Y+ NGSL S L +A++ V+ G+A
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-------DAQFTVIQLVGMLRGIAS 158
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YL +H D+ A N+L+ ++DFGL+R++ D + T + ++
Sbjct: 159 GMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKIP 213
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
+ +PE + ++ T SDV+S+G+VL EV++ G P
Sbjct: 214 --IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 774 IGTGSSGVVYRVTIPNGE-TLAVKKMWSSDESGA-----FSSEIQTLGSIRHKNIVRLLG 827
+G G G VY + LA+K ++ + A E++ +RH NI+RL G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + L +Y P G++ L K A Y + +A+AL+Y H ++
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 134
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H D+K N+LLG + +ADFG + + +++R L G+ Y+ PE +
Sbjct: 135 HRDIKPENLLLGSAGELKIADFGWS---------VHAPSSRRTTLCGTLDYLPPEMIEGR 185
Query: 948 RITEKSDVYSFGVVLLEVLTGRHPLD 973
EK D++S GV+ E L G+ P +
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGKPPFE 211
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 73.9 bits (180), Expect = 4e-13, Method: Composition-based stats.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 774 IGTGSSGVVYRVTIPNGE-TLAVKKMWSSDESGA-----FSSEIQTLGSIRHKNIVRLLG 827
+G G G VY + LA+K ++ + A E++ +RH NI+RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + L +Y P G++ L K A Y + +A+AL+Y H ++
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 130
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H D+K N+LLG + +ADFG + S +R L G+ Y+ PE +
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAPSS---------RRAALCGTLDYLPPEMIEGR 181
Query: 948 RITEKSDVYSFGVVLLEVLTGRHPLD 973
EK D++S GV+ E L G+ P +
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLGWGSNK 832
+G G G V+ T +A+K + S AF E Q + +RH+ +V+L S +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 334
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ ++ +Y+ GSL L G ++ +A +AY+ +H D++
Sbjct: 335 PIYIVT-EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDLR 390
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
A N+L+G +ADFGLAR++ +DN Q + + APE A R T K
Sbjct: 391 AANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFP--IKWTAPEAALYGRFTIK 444
Query: 953 SDVYSFGVVLLEVLT-GRHP 971
SDV+SFG++L E+ T GR P
Sbjct: 445 SDVWSFGILLTELTTKGRVP 464
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 73.9 bits (180), Expect = 4e-13, Method: Composition-based stats.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 774 IGTGSSGVVYRVTIPNGE-TLAVKKMWSSDESGA-----FSSEIQTLGSIRHKNIVRLLG 827
+G G G VY + LA+K ++ + A E++ +RH NI+RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + L +Y P G++ L K A Y + +A+AL+Y H ++
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 130
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H D+K N+LLG + +ADFG + S +R L G+ Y+ PE +
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAPSS---------RRTXLCGTLDYLPPEMIEGR 181
Query: 948 RITEKSDVYSFGVVLLEVLTGRHPLD 973
EK D++S GV+ E L G+ P +
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 73.9 bits (180), Expect = 4e-13, Method: Composition-based stats.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 774 IGTGSSGVVYRVTIPNGE-TLAVKKMWSSDESGA-----FSSEIQTLGSIRHKNIVRLLG 827
+G G G VY + LA+K ++ + A E++ +RH NI+RL G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + L +Y P G++ L K A Y + +A+AL+Y H ++
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 129
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H D+K N+LLG + +ADFG + S +R L G+ Y+ PE +
Sbjct: 130 HRDIKPENLLLGSAGELKIADFGWSVHAPSS---------RRTTLCGTLDYLPPEMIEGR 180
Query: 948 RITEKSDVYSFGVVLLEVLTGRHPLD 973
EK D++S GV+ E L G+ P +
Sbjct: 181 MHDEKVDLWSLGVLCYEFLVGKPPFE 206
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.9 bits (180), Expect = 4e-13, Method: Composition-based stats.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 774 IGTGSSGVVYRVTIPNGE-TLAVKKMWSSDESGA-----FSSEIQTLGSIRHKNIVRLLG 827
+G G G VY + LA+K ++ + A E++ +RH NI+RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + L +Y P G++ L K A Y + +A+AL+Y H ++
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 133
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H D+K N+LLG + +ADFG + S +R L G+ Y+ PE +
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWSVHAPSS---------RRTTLCGTLDYLPPEMIEGR 184
Query: 948 RITEKSDVYSFGVVLLEVLTGRHPLD 973
EK D++S GV+ E L G+ P +
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 73.9 bits (180), Expect = 4e-13, Method: Composition-based stats.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 774 IGTGSSGVVYRVTIPNGE-TLAVKKMWSSDESGA-----FSSEIQTLGSIRHKNIVRLLG 827
+G G G VY + LA+K ++ + A E++ +RH NI+RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + L +Y P G++ L K A Y + +A+AL+Y H ++
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 130
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H D+K N+LLG + +ADFG + S +R L G+ Y+ PE +
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAPSS---------RRXXLCGTLDYLPPEMIEGR 181
Query: 948 RITEKSDVYSFGVVLLEVLTGRHPLD 973
EK D++S GV+ E L G+ P +
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.9 bits (180), Expect = 4e-13, Method: Composition-based stats.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 774 IGTGSSGVVYRVTIPNGE-TLAVKKMWSSDESGA-----FSSEIQTLGSIRHKNIVRLLG 827
+G G G VY + LA+K ++ + A E++ +RH NI+RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + L +Y P G++ L K A Y + +A+AL+Y H ++
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 133
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H D+K N+LLG + +ADFG + S +R L G+ Y+ PE +
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWSVHAPSS---------RRXXLCGTLDYLPPEMIEGR 184
Query: 948 RITEKSDVYSFGVVLLEVLTGRHPLD 973
EK D++S GV+ E L G+ P +
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLGWGSNK 832
+G G G V+ T +A+K + + S AF E Q + +RH+ +V+L S +
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 252
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ ++ +Y+ GSL L G ++ +A +AY+ +H D++
Sbjct: 253 PIYIVT-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 308
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
A N+L+G +ADFGL R++ +DN Q + + APE A R T K
Sbjct: 309 AANILVGENLVCKVADFGLGRLI----EDNEYTARQGAKFP--IKWTAPEAALYGRFTIK 362
Query: 953 SDVYSFGVVLLEVLT-GRHP 971
SDV+SFG++L E+ T GR P
Sbjct: 363 SDVWSFGILLTELTTKGRVP 382
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 106/225 (47%), Gaps = 18/225 (8%)
Query: 757 LDFSIDDVVRNLTSANVIGTGSSGVVYR--VTIPNGE--TLAVKKM---WSSDESGAFSS 809
++F+ + V + VIG G G V R + P + +A+K + ++ + F S
Sbjct: 5 MEFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLS 64
Query: 810 EIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVL 869
E +G H NI+RL G +N ++ +++ NG+L S L G ++
Sbjct: 65 EASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR-LNDGQFTVIQLVGMLR 123
Query: 870 GVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQR 929
G+A + YL +H D+ A N+L+ ++DFGL+R + ++N S
Sbjct: 124 GIASGMRYLAEMSY---VHRDLAARNILVNSNLVCKVSDFGLSRFL----EENSSDPTYT 176
Query: 930 PQLAGS--YGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
L G + APE + ++ T SD +S+G+V+ EV++ G P
Sbjct: 177 SSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 73.6 bits (179), Expect = 5e-13, Method: Composition-based stats.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMWSSDESG-AFSSEIQTLGSIRHKNIVRLLGWGSNK 832
+G G G V+ T +A+K + S AF E Q + +RH+ +V+L S +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 82
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ ++ +Y+ GSL L G ++ +A +AY+ +H D++
Sbjct: 83 PIYIV-TEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER---MNYVHRDLR 138
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
A N+L+G +ADFGLAR++ +DN Q + + APE A R T K
Sbjct: 139 AANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFP--IKWTAPEAALYGRFTIK 192
Query: 953 SDVYSFGVVLLEVLT-GRHP 971
SDV+SFG++L E+ T GR P
Sbjct: 193 SDVWSFGILLTELTTKGRVP 212
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 73.6 bits (179), Expect = 6e-13, Method: Composition-based stats.
Identities = 61/200 (30%), Positives = 96/200 (48%), Gaps = 12/200 (6%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMWSSDESG-AFSSEIQTLGSIRHKNIVRLLGWGSNK 832
+G G G V+ T +A+K + S AF E Q + +RH+ +V+L S +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ ++ +Y+ GSL L G ++ +A +AY+ +H D+
Sbjct: 86 PIYIV-TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLA 141
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
A N+L+G +ADFGLAR++ +DN Q + + APE A R T K
Sbjct: 142 AANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFP--IKWTAPEAALYGRFTIK 195
Query: 953 SDVYSFGVVLLEVLT-GRHP 971
SDV+SFG++L E+ T GR P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 73.6 bits (179), Expect = 6e-13, Method: Composition-based stats.
Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 810 EIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVL 869
E++ +RH NI+RL G+ + L +Y P G++ L K A Y +
Sbjct: 55 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--IT 112
Query: 870 GVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQR 929
+A+AL+Y H ++H D+K N+LLG + +ADFG + S +R
Sbjct: 113 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---------RR 160
Query: 930 PQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLD 973
L G+ Y+ PE + EK D++S GV+ E L G+ P +
Sbjct: 161 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 204
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 774 IGTGSSGVVYRVTIPNGE-TLAVKKMWSSDESGA-----FSSEIQTLGSIRHKNIVRLLG 827
+G G G VY + LA+K ++ + A E++ +RH NI+RL G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + L +Y P G++ L K A Y + +A+AL+Y H ++
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 132
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H D+K N+LLG + +A+FG + S +R L G+ Y+ PE +
Sbjct: 133 HRDIKPENLLLGSAGELKIANFGWSVHAPSS---------RRTTLCGTLDYLPPEMIEGR 183
Query: 948 RITEKSDVYSFGVVLLEVLTGRHPLD 973
EK D++S GV+ E L G+ P +
Sbjct: 184 MHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 73.2 bits (178), Expect = 6e-13, Method: Composition-based stats.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 19/215 (8%)
Query: 768 LTSANVIGTGSSGVVYR-VTIPNGETL----AVKKMWSSDESGA---FSSEIQTLGSIRH 819
L V+G+G+ G VY+ + +P GET+ A+K + + A F E + S+ H
Sbjct: 17 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 76
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
++VRLLG + ++L+ +P+G L +H K + + +A + YL
Sbjct: 77 PHLVRLLGVCLSPTIQLV-TQLMPHGCLLEYVH-EHKDNIGSQLLLNWCVQIAKGMMYLE 134
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
++H D+ A NVL+ + DFGLAR++ G + + + P +M
Sbjct: 135 ER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMP-----IKWM 186
Query: 940 APEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
A E ++ T +SDV+S+GV + E++T G P D
Sbjct: 187 ALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 73.2 bits (178), Expect = 6e-13, Method: Composition-based stats.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 12/200 (6%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLGWGSNK 832
+G G G V+ T +A+K + S AF E Q + +RH+ +V+L S +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ ++ +Y+ G L L G ++ +A +AY+ +H D++
Sbjct: 86 PIYIVM-EYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 141
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
A N+L+G +ADFGLAR++ +DN Q + + APE A R T K
Sbjct: 142 AANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFP--IKWTAPEAALYGRFTIK 195
Query: 953 SDVYSFGVVLLEVLT-GRHP 971
SDV+SFG++L E+ T GR P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 73.2 bits (178), Expect = 7e-13, Method: Composition-based stats.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMWSSDESG-AFSSEIQTLGSIRHKNIVRLLGWGSNK 832
+G G G V+ T +A+K + S AF E Q + +RH+ +V+L S +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 82
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ ++ +Y+ GSL L G ++ +A +AY+ +H D++
Sbjct: 83 PIYIV-TEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER---MNYVHRDLR 138
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
A N+L+G +ADFGLAR++ +DN Q + + APE A R T K
Sbjct: 139 AANILVGENLVCKVADFGLARLI----EDNEWTARQGAKFP--IKWTAPEAALYGRFTIK 192
Query: 953 SDVYSFGVVLLEVLT-GRHP 971
SDV+SFG++L E+ T GR P
Sbjct: 193 SDVWSFGILLTELTTKGRVP 212
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLGWGSNK 832
+G G G V+ T +A+K + S +F E Q + ++H +V+L S +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSEE 76
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ ++ +Y+ GSL L ++ VA +AY+ +H D++
Sbjct: 77 PIYIV-TEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNY---IHRDLR 132
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
+ N+L+G G +ADFGLAR++ +DN Q + + APE A R T K
Sbjct: 133 SANILVGNGLICKIADFGLARLI----EDNEXTARQGAKF--PIKWTAPEAALYGRFTIK 186
Query: 953 SDVYSFGVVLLEVLT-GRHP 971
SDV+SFG++L E++T GR P
Sbjct: 187 SDVWSFGILLTELVTKGRVP 206
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 72.8 bits (177), Expect = 9e-13, Method: Composition-based stats.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 19/215 (8%)
Query: 768 LTSANVIGTGSSGVVYR-VTIPNGETL----AVKKMWSSDESGA---FSSEIQTLGSIRH 819
L V+G+G+ G VY+ + +P GET+ A+K + + A F E + S+ H
Sbjct: 40 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 99
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
++VRLLG + ++L+ +P+G L +H K + + +A + YL
Sbjct: 100 PHLVRLLGVCLSPTIQLV-TQLMPHGCLLEYVH-EHKDNIGSQLLLNWCVQIAKGMMYLE 157
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
++H D+ A NVL+ + DFGLAR++ G + + + P +M
Sbjct: 158 ER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMP-----IKWM 209
Query: 940 APEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
A E ++ T +SDV+S+GV + E++T G P D
Sbjct: 210 ALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 19/208 (9%)
Query: 773 VIGTGSSGVVYR-VTIPNGETLAVKKMWSSDE--SGAFSSEIQTLGSIRHKNIVRLLGWG 829
V+G G+ G+VY + N +A+K++ D S EI ++HKNIV+ LG
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 830 SNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLG-VAHALAYLHHDCMPPILH 888
S +F + +P GSLS+LL D E + L YLH + I+H
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVH 145
Query: 889 GDVKAMNVLLGPGYQAYL--ADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPE--HA 944
D+K NVL+ Y L +DFG ++ ++G + C++T G+ YMAPE
Sbjct: 146 RDIKGDNVLINT-YSGVLKISDFGTSKRLAGI--NPCTET-----FTGTLQYMAPEIIDK 197
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPL 972
+ + +D++S G ++E+ TG+ P
Sbjct: 198 GPRGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 774 IGTGSSGVVYRVTIPNGE-TLAVKKMWSSDESGA-----FSSEIQTLGSIRHKNIVRLLG 827
+G G G VY + LA+K ++ + A E++ +RH NI+RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + L +Y P G++ L K A Y + +A+AL+Y H ++
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSK---RVI 133
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H D+K N+LLG + +A+FG + S +R L G+ Y+ PE +
Sbjct: 134 HRDIKPENLLLGSAGELKIANFGWSVHAPSS---------RRTTLCGTLDYLPPEMIEGR 184
Query: 948 RITEKSDVYSFGVVLLEVLTGRHPLD 973
EK D++S GV+ E L G+ P +
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 72.8 bits (177), Expect = 1e-12, Method: Composition-based stats.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 12/200 (6%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLGWGSNK 832
+G G G V+ T +A+K + S AF E Q + +RH+ +V+L S +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ ++ +Y+ G L L G ++ +A +AY+ +H D++
Sbjct: 86 PIYIV-TEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 141
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
A N+L+G +ADFGLAR++ +DN Q + + APE A R T K
Sbjct: 142 AANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFP--IKWTAPEAALYGRFTIK 195
Query: 953 SDVYSFGVVLLEVLT-GRHP 971
SDV+SFG++L E+ T GR P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 15/169 (8%)
Query: 807 FSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARY- 865
F E+ + H+NIV ++ + L +Y+ +LS + G D +
Sbjct: 58 FEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFT 117
Query: 866 -EVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
+++ G+ HA HD I+H D+K N+L+ + DFG+A+ +S + + +
Sbjct: 118 NQILDGIKHA-----HDMR--IVHRDIKPQNILIDSNKTLKIFDFGIAKALS---ETSLT 167
Query: 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLD 973
+TN + G+ Y +PE A + E +D+YS G+VL E+L G P +
Sbjct: 168 QTNH---VLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 768 LTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGA-FSSEIQTLGSIRHKNIVRLL 826
LT IG+G G+V+ N + +A+K + S F E + + + H +V+L
Sbjct: 7 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLY 66
Query: 827 GWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPI 886
G + L ++++ +G LS L +G E + L V +AYL C +
Sbjct: 67 GVCLEQAPICLVFEFMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYLEEAC---V 122
Query: 887 LHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM 946
+H D+ A N L+G ++DFG+ R V D S T + + + +PE S
Sbjct: 123 IHRDLAARNCLVGENQVIKVSDFGMTRFVLD--DQYTSSTGTKFPVK----WASPEVFSF 176
Query: 947 QRITEKSDVYSFGVVLLEVLT-GRHPLD 973
R + KSDV+SFGV++ EV + G+ P +
Sbjct: 177 SRYSSKSDVWSFGVLMWEVFSEGKIPYE 204
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 768 LTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGA-FSSEIQTLGSIRHKNIVRLL 826
LT IG+G G+V+ N + +A+K + S F E + + + H +V+L
Sbjct: 12 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLY 71
Query: 827 GWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPI 886
G + L ++++ +G LS L +G E + L V +AYL C +
Sbjct: 72 GVCLEQAPICLVFEFMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYLEEAC---V 127
Query: 887 LHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM 946
+H D+ A N L+G ++DFG+ R V D S T + + + +PE S
Sbjct: 128 IHRDLAARNCLVGENQVIKVSDFGMTRFVLD--DQYTSSTGTKFPVK----WASPEVFSF 181
Query: 947 QRITEKSDVYSFGVVLLEVLT-GRHPLD 973
R + KSDV+SFGV++ EV + G+ P +
Sbjct: 182 SRYSSKSDVWSFGVLMWEVFSEGKIPYE 209
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 768 LTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGA-FSSEIQTLGSIRHKNIVRLL 826
LT IG+G G+V+ N + +A+K + S F E + + + H +V+L
Sbjct: 9 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLY 68
Query: 827 GWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPI 886
G + L ++++ +G LS L +G E + L V +AYL C +
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYLEEAC---V 124
Query: 887 LHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM 946
+H D+ A N L+G ++DFG+ R V D S T + + + +PE S
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLD--DQYTSSTGTKFPVK----WASPEVFSF 178
Query: 947 QRITEKSDVYSFGVVLLEVLT-GRHPLD 973
R + KSDV+SFGV++ EV + G+ P +
Sbjct: 179 SRYSSKSDVWSFGVLMWEVFSEGKIPYE 206
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 101/219 (46%), Gaps = 25/219 (11%)
Query: 765 VRNLTSANVIGTGSSGVV----YRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHK 820
++ L IG G G V YR G +AVK + + + AF +E + +RH
Sbjct: 11 MKELKLLQTIGKGEFGDVMLGDYR-----GNKVAVKCIKNDATAQAFLAEASVMTQLRHS 65
Query: 821 NIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
N+V+LLG K + +Y+ GSL L G+ + + L V A+ YL
Sbjct: 66 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 125
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+ +H D+ A NVL+ A ++DFGL + S + D T + P +
Sbjct: 126 GN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-----TGKLP-----VKWT 172
Query: 940 APEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTLP 977
APE + KSDV+SFG++L E+ + GR P P +P
Sbjct: 173 APEALREAAFSTKSDVWSFGILLWEIYSFGRVPY-PRIP 210
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 19/208 (9%)
Query: 773 VIGTGSSGVVYR-VTIPNGETLAVKKMWSSDE--SGAFSSEIQTLGSIRHKNIVRLLGWG 829
V+G G+ G+VY + N +A+K++ D S EI ++HKNIV+ LG
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 830 SNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLG-VAHALAYLHHDCMPPILH 888
S +F + +P GSLS+LL D E + L YLH + I+H
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVH 131
Query: 889 GDVKAMNVLLGPGYQAYL--ADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPE--HA 944
D+K NVL+ Y L +DFG ++ ++G + C++T G+ YMAPE
Sbjct: 132 RDIKGDNVLINT-YSGVLKISDFGTSKRLAGI--NPCTET-----FTGTLQYMAPEIIDK 183
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPL 972
+ + +D++S G ++E+ TG+ P
Sbjct: 184 GPRGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 105/219 (47%), Gaps = 28/219 (12%)
Query: 767 NLTSANVIGTGSSGVVY--RVTIPNGETLAV-----KKMWSSDESGAFSSEIQTLGSIRH 819
N++ V+G G G V R+ +P+ + ++V K ++ + F E +G H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVV------LGVAH 873
NI+RL G + ++ + + NGSL S L +A++ V+ G+A
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH-------DAQFTVIQLVGMLRGIAS 129
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YL +H D+ A N+L+ ++DFGL+R++ D + T + ++
Sbjct: 130 GMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIP 184
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
+ +PE + ++ T SDV+S+G+VL EV++ G P
Sbjct: 185 --IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 114/245 (46%), Gaps = 28/245 (11%)
Query: 741 NSFTADDTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVY--RVTIPNGETLAV--- 795
+F T+E +F+ + N++ V+G G G V R+ +P+ + ++V
Sbjct: 20 RTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 796 --KKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHG 853
K ++ + F E +G H NI+RL G + ++ + + NGSL S L
Sbjct: 80 TLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRK 139
Query: 854 AGKGGADWEARYEVV------LGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLA 907
+A++ V+ G+A + YL +H D+ A N+L+ ++
Sbjct: 140 H-------DAQFTVIQLVGMLRGIASGMKYLSD---MGAVHRDLAARNILINSNLVCKVS 189
Query: 908 DFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
DFGL+R++ D + T + ++ + +PE + ++ T SDV+S+G+VL EV++
Sbjct: 190 DFGLSRVLED--DPEAAYTTRGGKIP--IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 968 -GRHP 971
G P
Sbjct: 246 YGERP 250
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 12/209 (5%)
Query: 767 NLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGA-FSSEIQTLGSIRHKNIVRL 825
LT IG+G G+V+ N + +A+K + S F E + + + H +V+L
Sbjct: 8 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQL 67
Query: 826 LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPP 885
G + L ++++ +G LS L +G E + L V +AYL
Sbjct: 68 YGVCLEQAPICLVFEFMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYLEE---AS 123
Query: 886 ILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHAS 945
++H D+ A N L+G ++DFG+ R V D S T + + + +PE S
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD--DQYTSSTGTKFPVK----WASPEVFS 177
Query: 946 MQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
R + KSDV+SFGV++ EV + G+ P +
Sbjct: 178 FSRYSSKSDVWSFGVLMWEVFSEGKIPYE 206
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 11/200 (5%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLGWGSNK 832
+G G G V+ N +AVK + S AF E + +++H +VRL + +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTRE 80
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ +Y+ GSL L G + +A +AY+ +H D++
Sbjct: 81 EPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLR 137
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
A NVL+ +ADFGLAR++ +DN + R + APE + T K
Sbjct: 138 AANVLVSESLMCKIADFGLARVI----EDN--EYTAREGAKFPIKWTAPEAINFGCFTIK 191
Query: 953 SDVYSFGVVLLEVLT-GRHP 971
SDV+SFG++L E++T G+ P
Sbjct: 192 SDVWSFGILLYEIVTYGKIP 211
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 103/227 (45%), Gaps = 41/227 (18%)
Query: 764 VVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAF-SSEIQTLGSIRHKNI 822
V R++T +G G G V+R + GE +AVK S DE F +E+ +RH+NI
Sbjct: 6 VARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENI 64
Query: 823 VRLLG-----WGSNKNLKLL--------FYDYLPNGSLSSLLHGAGKGGADWEARYEVVL 869
+ + S+ L L+ YDYL +L ++ + +VL
Sbjct: 65 LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV------------SCLRIVL 112
Query: 870 GVAHALAYLHHDCM-----PPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
+A LA+LH + P I H D+K+ N+L+ Q +AD GLA + S S +
Sbjct: 113 SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDV 172
Query: 925 KTNQRPQLAGSYGYMAPE------HASMQRITEKSDVYSFGVVLLEV 965
N R G+ YMAPE ++ D+++FG+VL EV
Sbjct: 173 GNNPR---VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 102/216 (47%), Gaps = 32/216 (14%)
Query: 767 NLTSANVIGTGSSGVVYR-VTIPNGETLAVKKMWS--SDESG-----AFSSEIQTLGSIR 818
L V+G+G G V++ V IP GE++ + D+SG A + + +GS+
Sbjct: 32 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD 91
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGA-------DWEARYEVVLGV 871
H +IVRLLG +L+L+ YLP GSL L H GA +W + +
Sbjct: 92 HAHIVRLLGLCPGSSLQLV-TQYLPLGSL--LDHVRQHRGALGPQLLLNWGVQ------I 142
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQ 931
A + YL M +H ++ A NVLL Q +ADFG+A ++ + P
Sbjct: 143 AKGMYYLEEHGM---VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP- 198
Query: 932 LAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+MA E + T +SDV+S+GV + E++T
Sbjct: 199 ----IKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 17/219 (7%)
Query: 761 IDDVVRNLTSANVIGTGSSGVVYRV-TIPNGETLAVK-----KMWSSDESGAFSSEIQTL 814
I + + + N++G GS VYR +I G +A+K M+ + +E++
Sbjct: 6 IGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 815 GSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHA 874
++H +I+ L + + N L + NG ++ L K ++ EAR+ + +
Sbjct: 66 CQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARH-FMHQIITG 124
Query: 875 LAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAG 934
+ YLH ILH D+ N+LL +ADFGLA + + + + L G
Sbjct: 125 MLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-------LCG 174
Query: 935 SYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLD 973
+ Y++PE A+ +SDV+S G + +L GR P D
Sbjct: 175 TPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 105/219 (47%), Gaps = 28/219 (12%)
Query: 767 NLTSANVIGTGSSGVVY--RVTIPNGETLAV-----KKMWSSDESGAFSSEIQTLGSIRH 819
N++ V+G G G V R+ +P+ + ++V K ++ + F E +G H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVV------LGVAH 873
NI+RL G + ++ + + NGSL S L +A++ V+ G+A
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH-------DAQFTVIQLVGMLRGIAS 158
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YL +H D+ A N+L+ ++DFGL+R++ D + T + ++
Sbjct: 159 GMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIP 213
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
+ +PE + ++ T SDV+S+G+VL EV++ G P
Sbjct: 214 --IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 774 IGTGSSGVVYRVTIPNGE-TLAVKKMWSSDESGA-----FSSEIQTLGSIRHKNIVRLLG 827
+G G G VY + LA+K ++ + A E++ +RH NI+RL G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + L +Y P G++ L + A Y + +A+AL+Y H ++
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATY--ITELANALSYCHSK---RVI 134
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H D+K N+LLG + +ADFG + + +++R L G+ Y+ PE +
Sbjct: 135 HRDIKPENLLLGSNGELKIADFGWS---------VHAPSSRRTTLCGTLDYLPPEMIEGR 185
Query: 948 RITEKSDVYSFGVVLLEVLTGRHPLD 973
EK D++S GV+ E L G P +
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 101/219 (46%), Gaps = 25/219 (11%)
Query: 764 VVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAF-SSEIQTLGSIRHKNI 822
V R +T +G G G V+R + GE +AVK S DE F +E+ +RH+NI
Sbjct: 35 VARQITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENI 93
Query: 823 VRLLG-----WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAY 877
+ + S+ L L+ + Y GSL L D + +VL +A LA+
Sbjct: 94 LGFIASDMTSRHSSTQLWLITH-YHEMGSLYDYLQLTT---LDTVSCLRIVLSIASGLAH 149
Query: 878 LHHDCM-----PPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQL 932
LH + P I H D+K+ N+L+ Q +AD GLA + S S + N R
Sbjct: 150 LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR--- 206
Query: 933 AGSYGYMAPE------HASMQRITEKSDVYSFGVVLLEV 965
G+ YMAPE ++ D+++FG+VL EV
Sbjct: 207 VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 774 IGTGSSGVVYRVTIPNGE-TLAVKKMWSSDESGA-----FSSEIQTLGSIRHKNIVRLLG 827
+G G G VY + LA+K ++ + A E++ +RH NI+RL G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + L +Y P G++ L + A Y + +A+AL+Y H ++
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATY--ITELANALSYCHSK---RVI 134
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H D+K N+LLG + +ADFG + + +++R L G+ Y+ PE +
Sbjct: 135 HRDIKPENLLLGSNGELKIADFGWS---------VHAPSSRRDTLCGTLDYLPPEMIEGR 185
Query: 948 RITEKSDVYSFGVVLLEVLTGRHPLD 973
EK D++S GV+ E L G P +
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 102/216 (47%), Gaps = 32/216 (14%)
Query: 767 NLTSANVIGTGSSGVVYR-VTIPNGETLAVKKMWS--SDESG-----AFSSEIQTLGSIR 818
L V+G+G G V++ V IP GE++ + D+SG A + + +GS+
Sbjct: 14 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD 73
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGA-------DWEARYEVVLGV 871
H +IVRLLG +L+L+ YLP GSL L H GA +W + +
Sbjct: 74 HAHIVRLLGLCPGSSLQLV-TQYLPLGSL--LDHVRQHRGALGPQLLLNWGVQ------I 124
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQ 931
A + YL M +H ++ A NVLL Q +ADFG+A ++ + P
Sbjct: 125 AKGMYYLEEHGM---VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP- 180
Query: 932 LAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+MA E + T +SDV+S+GV + E++T
Sbjct: 181 ----IKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 70.5 bits (171), Expect = 4e-12, Method: Composition-based stats.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 12/208 (5%)
Query: 768 LTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGA-FSSEIQTLGSIRHKNIVRLL 826
LT IG+G G+V+ N + +A+K + S F E + + + H +V+L
Sbjct: 10 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLY 69
Query: 827 GWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPI 886
G + L +++ +G LS L +G E + L V +AYL C +
Sbjct: 70 GVCLEQAPICLVTEFMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYLEEAC---V 125
Query: 887 LHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM 946
+H D+ A N L+G ++DFG+ R V D S T + + + +PE S
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMTRFVLD--DQYTSSTGTKFPVK----WASPEVFSF 179
Query: 947 QRITEKSDVYSFGVVLLEVLT-GRHPLD 973
R + KSDV+SFGV++ EV + G+ P +
Sbjct: 180 SRYSSKSDVWSFGVLMWEVFSEGKIPYE 207
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 102/218 (46%), Gaps = 23/218 (10%)
Query: 764 VVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAF-SSEIQTLGSIRHKNI 822
V R + +G G G V+R + +GE++AVK S DE F +EI +RH NI
Sbjct: 6 VARQVALVECVGKGRYGEVWR-GLWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNI 64
Query: 823 VRLLG---WGSNKNLKL-LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYL 878
+ + N + +L L Y +GSL L + + + + A LA+L
Sbjct: 65 LGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQ---RQTLEPHLALRLAVSAACGLAHL 121
Query: 879 HHDCM-----PPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
H + P I H D K+ NVL+ Q +AD GLA ++ G D N P++
Sbjct: 122 HVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA-VMHSQGSDYLDIGNN-PRV- 178
Query: 934 GSYGYMAPEHASMQRITE------KSDVYSFGVVLLEV 965
G+ YMAPE Q T+ +D+++FG+VL E+
Sbjct: 179 GTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 116/246 (47%), Gaps = 32/246 (13%)
Query: 741 NSFTADDTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYRVTIPN-GE-----TLA 794
NS+T D ++ +K +F + NL +G G+ G V T G+ +A
Sbjct: 17 NSYTFIDPTQLPYNEKWEFPRN----NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVA 72
Query: 795 VKKMWSS---DESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSL 850
VK + S+ DE A SE++ + + +H+NIV LLG ++ L+ +Y G L +
Sbjct: 73 VKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNF 132
Query: 851 LHGAGKGGADWEARYEVVL--------GVAHALAYL-HHDCMPPILHGDVKAMNVLLGPG 901
L + D E + L VA +A+L +C +H DV A NVLL G
Sbjct: 133 LRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNG 188
Query: 902 YQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVV 961
+ A + DFGLAR + + K N R + +MAPE T +SDV+S+G++
Sbjct: 189 HVAKIGDFGLARDIMNDS-NYIVKGNARLPVK----WMAPESIFDCVYTVQSDVWSYGIL 243
Query: 962 LLEVLT 967
L E+ +
Sbjct: 244 LWEIFS 249
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 101/226 (44%), Gaps = 29/226 (12%)
Query: 774 IGTGSSGVVYR-VTIPNGETLAVKKM---WSSDESGAFSSEIQTLGSIRHKNIV--RLLG 827
+GTG G V R + GE +A+K+ S + EIQ + + H N+V R +
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 828 WGSNK----NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLG-VAHALAYLHHDC 882
G K +L LL +Y G L L+ E +L ++ AL YLH +
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN- 140
Query: 883 MPPILHGDVKAMNVLLGPGYQAYLA---DFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
I+H D+K N++L PG Q + D G A+ + + C+ + G+ Y+
Sbjct: 141 --RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG--ELCT------EFVGTLQYL 190
Query: 940 APEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQW 985
APE ++ T D +SFG + E +TG P LP P VQW
Sbjct: 191 APELLEQKKYTVTVDYWSFGTLAFECITG---FRPFLPNWQP-VQW 232
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 101/226 (44%), Gaps = 29/226 (12%)
Query: 774 IGTGSSGVVYR-VTIPNGETLAVKKM---WSSDESGAFSSEIQTLGSIRHKNIV--RLLG 827
+GTG G V R + GE +A+K+ S + EIQ + + H N+V R +
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 828 WGSNK----NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLG-VAHALAYLHHDC 882
G K +L LL +Y G L L+ E +L ++ AL YLH +
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN- 141
Query: 883 MPPILHGDVKAMNVLLGPGYQAYLA---DFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
I+H D+K N++L PG Q + D G A+ + + C+ + G+ Y+
Sbjct: 142 --RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG--ELCT------EFVGTLQYL 191
Query: 940 APEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQW 985
APE ++ T D +SFG + E +TG P LP P VQW
Sbjct: 192 APELLEQKKYTVTVDYWSFGTLAFECITG---FRPFLPNWQP-VQW 233
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 63/230 (27%), Positives = 105/230 (45%), Gaps = 23/230 (10%)
Query: 740 NNSFTADDTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVY-RVTIPNGETLAVKKM 798
N F + D WEM ++ D +T + +G G G VY V T+AVK +
Sbjct: 18 NLYFQSMDKWEM---ERTD---------ITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTL 65
Query: 799 WSSD-ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKG 857
E F E + I+H N+V+LLG + + + +Y+P G+L L +
Sbjct: 66 KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNRE 125
Query: 858 GADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSG 917
+ ++ A+ YL +H D+ A N L+G + +ADFGL+R++
Sbjct: 126 EVTAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHVVKVADFGLSRLM-- 180
Query: 918 SGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+GD + + + + APE + + KSDV++FGV+L E+ T
Sbjct: 181 TGDTYTAHAGAKFPIK----WTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 16/215 (7%)
Query: 760 SIDDVVRNLTSANVIGTGSSGVVYR-VTIPNGETLAVKKM--WSSDESGAFSSEIQTLGS 816
S+ D + T IG G+SG VY + + G+ +A+++M + +EI +
Sbjct: 14 SVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 73
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALA 876
++ NIV L + + +YL GSL+ ++ A V AL
Sbjct: 74 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA---VCRECLQALE 130
Query: 877 YLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSY 936
+LH + ++H D+K+ N+LLG L DFG ++ + ++R ++ G+
Sbjct: 131 FLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT-------PEQSKRSEMVGTP 180
Query: 937 GYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHP 971
+MAPE + + K D++S G++ +E++ G P
Sbjct: 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 116/246 (47%), Gaps = 32/246 (13%)
Query: 741 NSFTADDTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYRVTIPN-GE-----TLA 794
NS+T D ++ +K +F + NL +G G+ G V T G+ +A
Sbjct: 25 NSYTFIDPTQLPYNEKWEFPRN----NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVA 80
Query: 795 VKKMWSS---DESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSL 850
VK + S+ DE A SE++ + + +H+NIV LLG ++ L+ +Y G L +
Sbjct: 81 VKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNF 140
Query: 851 LHGAGKGGADWEARYEVVL--------GVAHALAYL-HHDCMPPILHGDVKAMNVLLGPG 901
L + D E + L VA +A+L +C +H DV A NVLL G
Sbjct: 141 LRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNG 196
Query: 902 YQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVV 961
+ A + DFGLAR + + K N R + +MAPE T +SDV+S+G++
Sbjct: 197 HVAKIGDFGLARDIMNDS-NYIVKGNARLPVK----WMAPESIFDCVYTVQSDVWSYGIL 251
Query: 962 LLEVLT 967
L E+ +
Sbjct: 252 LWEIFS 257
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 790 GETLAVKKMWSSDESGA--FSSEIQTLGSIRHKNIVRLLG---WGSNKNLKLLFYDYLPN 844
GE +AVKK+ S E F EI+ L S++H NIV+ G +NLKL+ +YLP
Sbjct: 46 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPY 104
Query: 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQA 904
GSL L K D + + + YL +H D+ N+L+ +
Sbjct: 105 GSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRV 160
Query: 905 YLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLE 964
+ DFGL +++ D + P + + Y APE + + + SDV+SFGVVL E
Sbjct: 161 KIGDFGLTKVLP---QDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYE 216
Query: 965 VLT 967
+ T
Sbjct: 217 LFT 219
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 790 GETLAVKKMWSSDESGA--FSSEIQTLGSIRHKNIVRLLG---WGSNKNLKLLFYDYLPN 844
GE +AVKK+ S E F EI+ L S++H NIV+ G +NLKL+ +YLP
Sbjct: 44 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPY 102
Query: 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQA 904
GSL L K D + + + YL +H D+ N+L+ +
Sbjct: 103 GSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRV 158
Query: 905 YLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLE 964
+ DFGL +++ D + P + + Y APE + + + SDV+SFGVVL E
Sbjct: 159 KIGDFGLTKVLP---QDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYE 214
Query: 965 VLT 967
+ T
Sbjct: 215 LFT 217
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 790 GETLAVKKMWSSDESGA--FSSEIQTLGSIRHKNIVRLLG---WGSNKNLKLLFYDYLPN 844
GE +AVKK+ S E F EI+ L S++H NIV+ G +NLKL+ +YLP
Sbjct: 45 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPY 103
Query: 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQA 904
GSL L K D + + + YL +H D+ N+L+ +
Sbjct: 104 GSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRV 159
Query: 905 YLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLE 964
+ DFGL +++ D + P + + Y APE + + + SDV+SFGVVL E
Sbjct: 160 KIGDFGLTKVLP---QDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYE 215
Query: 965 VLT 967
+ T
Sbjct: 216 LFT 218
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 790 GETLAVKKMWSSDESGA--FSSEIQTLGSIRHKNIVRLLG---WGSNKNLKLLFYDYLPN 844
GE +AVKK+ S E F EI+ L S++H NIV+ G +NLKL+ +YLP
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPY 100
Query: 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQA 904
GSL L K D + + + YL +H D+ N+L+ +
Sbjct: 101 GSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRV 156
Query: 905 YLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLE 964
+ DFGL +++ D + P + + Y APE + + + SDV+SFGVVL E
Sbjct: 157 KIGDFGLTKVLP---QDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYE 212
Query: 965 VLT 967
+ T
Sbjct: 213 LFT 215
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 790 GETLAVKKMWSSDESGA--FSSEIQTLGSIRHKNIVRLLG---WGSNKNLKLLFYDYLPN 844
GE +AVKK+ S E F EI+ L S++H NIV+ G +NLKL+ +YLP
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPY 97
Query: 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQA 904
GSL L K D + + + YL +H D+ N+L+ +
Sbjct: 98 GSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRV 153
Query: 905 YLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLE 964
+ DFGL +++ D + P + + Y APE + + + SDV+SFGVVL E
Sbjct: 154 KIGDFGLTKVLP---QDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYE 209
Query: 965 VLT 967
+ T
Sbjct: 210 LFT 212
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 790 GETLAVKKMWSSDESGA--FSSEIQTLGSIRHKNIVRLLG---WGSNKNLKLLFYDYLPN 844
GE +AVKK+ S E F EI+ L S++H NIV+ G +NLKL+ +YLP
Sbjct: 70 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPY 128
Query: 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQA 904
GSL L K D + + + YL +H D+ N+L+ +
Sbjct: 129 GSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRV 184
Query: 905 YLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLE 964
+ DFGL +++ D + P + + Y APE + + + SDV+SFGVVL E
Sbjct: 185 KIGDFGLTKVLP---QDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYE 240
Query: 965 VLT 967
+ T
Sbjct: 241 LFT 243
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 790 GETLAVKKMWSSDESGA--FSSEIQTLGSIRHKNIVRLLG---WGSNKNLKLLFYDYLPN 844
GE +AVKK+ S E F EI+ L S++H NIV+ G +NLKL+ +YLP
Sbjct: 37 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPY 95
Query: 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQA 904
GSL L K D + + + YL +H D+ N+L+ +
Sbjct: 96 GSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRV 151
Query: 905 YLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLE 964
+ DFGL +++ D + P + + Y APE + + + SDV+SFGVVL E
Sbjct: 152 KIGDFGLTKVLP---QDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYE 207
Query: 965 VLT 967
+ T
Sbjct: 208 LFT 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 790 GETLAVKKMWSSDESGA--FSSEIQTLGSIRHKNIVRLLG---WGSNKNLKLLFYDYLPN 844
GE +AVKK+ S E F EI+ L S++H NIV+ G +NLKL+ +YLP
Sbjct: 43 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPY 101
Query: 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQA 904
GSL L K D + + + YL +H D+ N+L+ +
Sbjct: 102 GSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRV 157
Query: 905 YLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLE 964
+ DFGL +++ D + P + + Y APE + + + SDV+SFGVVL E
Sbjct: 158 KIGDFGLTKVLP---QDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYE 213
Query: 965 VLT 967
+ T
Sbjct: 214 LFT 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 790 GETLAVKKMWSSDESGA--FSSEIQTLGSIRHKNIVRLLG---WGSNKNLKLLFYDYLPN 844
GE +AVKK+ S E F EI+ L S++H NIV+ G +NLKL+ +YLP
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPY 97
Query: 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQA 904
GSL L K D + + + YL +H D+ N+L+ +
Sbjct: 98 GSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRV 153
Query: 905 YLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLE 964
+ DFGL +++ D + P + + Y APE + + + SDV+SFGVVL E
Sbjct: 154 KIGDFGLTKVLP---QDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYE 209
Query: 965 VLT 967
+ T
Sbjct: 210 LFT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 790 GETLAVKKMWSSDESGA--FSSEIQTLGSIRHKNIVRLLG---WGSNKNLKLLFYDYLPN 844
GE +AVKK+ S E F EI+ L S++H NIV+ G +NLKL+ +YLP
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPY 115
Query: 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQA 904
GSL L K D + + + YL +H D+ N+L+ +
Sbjct: 116 GSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRV 171
Query: 905 YLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLE 964
+ DFGL +++ D + P + + Y APE + + + SDV+SFGVVL E
Sbjct: 172 KIGDFGLTKVLP---QDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYE 227
Query: 965 VLT 967
+ T
Sbjct: 228 LFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 790 GETLAVKKMWSSDESGA--FSSEIQTLGSIRHKNIVRLLG---WGSNKNLKLLFYDYLPN 844
GE +AVKK+ S E F EI+ L S++H NIV+ G +NLKL+ +YLP
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPY 115
Query: 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQA 904
GSL L K D + + + YL +H D+ N+L+ +
Sbjct: 116 GSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRV 171
Query: 905 YLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLE 964
+ DFGL +++ D + P + + Y APE + + + SDV+SFGVVL E
Sbjct: 172 KIGDFGLTKVLP---QDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYE 227
Query: 965 VLT 967
+ T
Sbjct: 228 LFT 230
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 790 GETLAVKKMWSSDESGA--FSSEIQTLGSIRHKNIVRLLG---WGSNKNLKLLFYDYLPN 844
GE +AVKK+ S E F EI+ L S++H NIV+ G +NLKL+ +YLP
Sbjct: 38 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPY 96
Query: 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQA 904
GSL L K D + + + YL +H D+ N+L+ +
Sbjct: 97 GSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRV 152
Query: 905 YLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLE 964
+ DFGL +++ D + P + + Y APE + + + SDV+SFGVVL E
Sbjct: 153 KIGDFGLTKVLP---QDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYE 208
Query: 965 VLT 967
+ T
Sbjct: 209 LFT 211
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 57/183 (31%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 790 GETLAVKKMWSSDESGA--FSSEIQTLGSIRHKNIVRLLG---WGSNKNLKLLFYDYLPN 844
GE +AVKK+ S E F EI+ L S++H NIV+ G +NLKL+ +YLP
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPY 100
Query: 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQA 904
GSL L + D + + + YL +H D+ N+L+ +
Sbjct: 101 GSLRDYLQAHAER-IDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRV 156
Query: 905 YLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLE 964
+ DFGL +++ D + P + + Y APE + + + SDV+SFGVVL E
Sbjct: 157 KIGDFGLTKVLP---QDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYE 212
Query: 965 VLT 967
+ T
Sbjct: 213 LFT 215
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 774 IGTGSSGVVYRVTIPNGET-LAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLGWGSN 831
+G G G V+ + NG T +AVK + S AF +E + ++H+ +VRL +
Sbjct: 21 LGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 832 KNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDV 891
+ + ++ +Y+ NGSL L ++ +A +A++ +H D+
Sbjct: 80 EPIYII-TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDL 135
Query: 892 KAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITE 951
+A N+L+ +ADFGLAR++ +DN + R + APE + T
Sbjct: 136 RAANILVSDTLSCKIADFGLARLI----EDN--EXTAREGAKFPIKWTAPEAINYGTFTI 189
Query: 952 KSDVYSFGVVLLEVLT-GRHP 971
KSDV+SFG++L E++T GR P
Sbjct: 190 KSDVWSFGILLTEIVTHGRIP 210
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 774 IGTGSSGVVYRVTIPNGET-LAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLGWGSN 831
+G G G V+ + NG T +AVK + S AF +E + ++H+ +VRL +
Sbjct: 22 LGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 832 KNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDV 891
+ + ++ +Y+ NGSL L ++ +A +A++ +H D+
Sbjct: 81 EPIYII-TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDL 136
Query: 892 KAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITE 951
+A N+L+ +ADFGLAR++ +DN + R + APE + T
Sbjct: 137 RAANILVSDTLSCKIADFGLARLI----EDN--EXTAREGAKFPIKWTAPEAINYGTFTI 190
Query: 952 KSDVYSFGVVLLEVLT-GRHP 971
KSDV+SFG++L E++T GR P
Sbjct: 191 KSDVWSFGILLTEIVTHGRIP 211
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 56/201 (27%), Positives = 98/201 (48%), Gaps = 14/201 (6%)
Query: 774 IGTGSSGVVYRVTIPNGET-LAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLGWGSN 831
+G G +G V+ + NG T +AVK + S AF +E + ++H+ +VRL +
Sbjct: 21 LGAGQAGEVW-MGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 832 KNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDV 891
+ + ++ +Y+ NGSL L ++ +A +A++ +H D+
Sbjct: 80 EPIYII-TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDL 135
Query: 892 KAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITE 951
+A N+L+ +ADFGLAR++ + + R + APE + T
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDA------EXTAREGAKFPIKWTAPEAINYGTFTI 189
Query: 952 KSDVYSFGVVLLEVLT-GRHP 971
KSDV+SFG++L E++T GR P
Sbjct: 190 KSDVWSFGILLTEIVTHGRIP 210
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 774 IGTGSSGVVYRVTIPNGET-LAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLGWGSN 831
+G G G V+ + NG T +AVK + S AF +E + ++H+ +VRL +
Sbjct: 23 LGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 81
Query: 832 KNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDV 891
+ + ++ +Y+ NGSL L ++ +A +A++ +H D+
Sbjct: 82 EPIYII-TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDL 137
Query: 892 KAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITE 951
+A N+L+ +ADFGLAR++ +DN + R + APE + T
Sbjct: 138 RAANILVSDTLSCKIADFGLARLI----EDN--EXTAREGAKFPIKWTAPEAINYGTFTI 191
Query: 952 KSDVYSFGVVLLEVLT-GRHP 971
KSDV+SFG++L E++T GR P
Sbjct: 192 KSDVWSFGILLTEIVTHGRIP 212
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 774 IGTGSSGVVYRVTIPNGET-LAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLGWGSN 831
+G G G V+ + NG T +AVK + S AF +E + ++H+ +VRL +
Sbjct: 21 LGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 832 KNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDV 891
+ + ++ +Y+ NGSL L ++ +A +A++ +H D+
Sbjct: 80 EPIYII-TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDL 135
Query: 892 KAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITE 951
+A N+L+ +ADFGLAR++ +DN + R + APE + T
Sbjct: 136 RAANILVSDTLSCKIADFGLARLI----EDN--EXTAREGAKFPIKWTAPEAINYGTFTI 189
Query: 952 KSDVYSFGVVLLEVLT-GRHP 971
KSDV+SFG++L E++T GR P
Sbjct: 190 KSDVWSFGILLTEIVTHGRIP 210
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 774 IGTGSSGVVYRVTIPNGET-LAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLGWGSN 831
+G G G V+ + NG T +AVK + S AF +E + ++H+ +VRL +
Sbjct: 27 LGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 832 KNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDV 891
+ + ++ +Y+ NGSL L ++ +A +A++ +H D+
Sbjct: 86 EPIYII-TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDL 141
Query: 892 KAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITE 951
+A N+L+ +ADFGLAR++ +DN + R + APE + T
Sbjct: 142 RAANILVSDTLSCKIADFGLARLI----EDN--EXTAREGAKFPIKWTAPEAINYGTFTI 195
Query: 952 KSDVYSFGVVLLEVLT-GRHP 971
KSDV+SFG++L E++T GR P
Sbjct: 196 KSDVWSFGILLTEIVTHGRIP 216
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 774 IGTGSSGVVYRVTIPNGET-LAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLGWGSN 831
+G G G V+ + NG T +AVK + S AF +E + ++H+ +VRL +
Sbjct: 30 LGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 88
Query: 832 KNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDV 891
+ + ++ +Y+ NGSL L ++ +A +A++ +H D+
Sbjct: 89 EPIYII-TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDL 144
Query: 892 KAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITE 951
+A N+L+ +ADFGLAR++ +DN + R + APE + T
Sbjct: 145 RAANILVSDTLSCKIADFGLARLI----EDN--EXTAREGAKFPIKWTAPEAINYGTFTI 198
Query: 952 KSDVYSFGVVLLEVLT-GRHP 971
KSDV+SFG++L E++T GR P
Sbjct: 199 KSDVWSFGILLTEIVTHGRIP 219
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 63/235 (26%), Positives = 108/235 (45%), Gaps = 27/235 (11%)
Query: 747 DTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYR-VTIPNGETLAVKKMWSSD-ES 804
D WEM ++ D +T + +G G G VY V T+AVK + E
Sbjct: 4 DKWEM---ERTD---------ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV 51
Query: 805 GAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR 864
F E + I+H N+V+LLG + + + +++ G+L L +
Sbjct: 52 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 865 YEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
+ ++ A+ YL +H D+ A N L+G + +ADFGL+R++ +GD +
Sbjct: 112 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTXTA 166
Query: 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHP---LDPT 975
+ + + APE + + + KSDV++FGV+L E+ T G P +DP+
Sbjct: 167 HAGAKFPIK----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPS 217
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 774 IGTGSSGVVYRVTIPNGET-LAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLGWGSN 831
+G G G V+ + NG T +AVK + S AF +E + ++H+ +VRL +
Sbjct: 27 LGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 832 KNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDV 891
+ + ++ +Y+ NGSL L ++ +A +A++ +H D+
Sbjct: 86 EPIYII-TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDL 141
Query: 892 KAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITE 951
+A N+L+ +ADFGLAR++ +DN + R + APE + T
Sbjct: 142 RAANILVSDTLSCKIADFGLARLI----EDN--EYTAREGAKFPIKWTAPEAINYGTFTI 195
Query: 952 KSDVYSFGVVLLEVLT-GRHP 971
KSDV+SFG++L E++T GR P
Sbjct: 196 KSDVWSFGILLTEIVTHGRIP 216
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 774 IGTGSSGVVYRVTIPNGET-LAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLGWGSN 831
+G G G V+ + NG T +AVK + S AF +E + ++H+ +VRL +
Sbjct: 21 LGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 832 KNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDV 891
+ + ++ +Y+ NGSL L ++ +A +A++ +H D+
Sbjct: 80 EPIYII-TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDL 135
Query: 892 KAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITE 951
+A N+L+ +ADFGLAR++ +DN + R + APE + T
Sbjct: 136 RAANILVSDTLSCKIADFGLARLI----EDN--EYTAREGAKFPIKWTAPEAINYGTFTI 189
Query: 952 KSDVYSFGVVLLEVLT-GRHP 971
KSDV+SFG++L E++T GR P
Sbjct: 190 KSDVWSFGILLTEIVTHGRIP 210
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 774 IGTGSSGVVYRVTIPNGET-LAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLGWGSN 831
+G G G V+ + NG T +AVK + S AF +E + ++H+ +VRL +
Sbjct: 16 LGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 832 KNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDV 891
+ + ++ +Y+ NGSL L ++ +A +A++ +H D+
Sbjct: 75 EPIYII-TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDL 130
Query: 892 KAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITE 951
+A N+L+ +ADFGLAR++ +DN + R + APE + T
Sbjct: 131 RAANILVSDTLSCKIADFGLARLI----EDN--EYTAREGAKFPIKWTAPEAINYGTFTI 184
Query: 952 KSDVYSFGVVLLEVLT-GRHP 971
KSDV+SFG++L E++T GR P
Sbjct: 185 KSDVWSFGILLTEIVTHGRIP 205
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 774 IGTGSSGVVYRVTIPNGET-LAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLGWGSN 831
+G G G V+ + NG T +AVK + S AF +E + ++H+ +VRL +
Sbjct: 26 LGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 84
Query: 832 KNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDV 891
+ + ++ +Y+ NGSL L ++ +A +A++ +H D+
Sbjct: 85 EPIYII-TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDL 140
Query: 892 KAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITE 951
+A N+L+ +ADFGLAR++ +DN + R + APE + T
Sbjct: 141 RAANILVSDTLSCKIADFGLARLI----EDN--EYTAREGAKFPIKWTAPEAINYGTFTI 194
Query: 952 KSDVYSFGVVLLEVLT-GRHP 971
KSDV+SFG++L E++T GR P
Sbjct: 195 KSDVWSFGILLTEIVTHGRIP 215
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 774 IGTGSSGVVYRVTIPNGET-LAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLGWGSN 831
+G G G V+ + NG T +AVK + S AF +E + ++H+ +VRL +
Sbjct: 29 LGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 87
Query: 832 KNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDV 891
+ + ++ +Y+ NGSL L ++ +A +A++ +H D+
Sbjct: 88 EPIYII-TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDL 143
Query: 892 KAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITE 951
+A N+L+ +ADFGLAR++ +DN + R + APE + T
Sbjct: 144 RAANILVSDTLSCKIADFGLARLI----EDN--EXTAREGAKFPIKWTAPEAINYGTFTI 197
Query: 952 KSDVYSFGVVLLEVLT-GRHP 971
KSDV+SFG++L E++T GR P
Sbjct: 198 KSDVWSFGILLTEIVTHGRIP 218
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLGWGSNK 832
+G G G V+ T +AVK M S AF +E + +++H +V+L + +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKE 82
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ ++ +++ GSL L + +A +A++ +H D++
Sbjct: 83 PIYII-TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLR 138
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
A N+L+ +ADFGLAR++ +DN + R + APE + T K
Sbjct: 139 AANILVSASLVCKIADFGLARVI----EDN--EYTAREGAKFPIKWTAPEAINFGSFTIK 192
Query: 953 SDVYSFGVVLLEVLT-GRHP 971
SDV+SFG++L+E++T GR P
Sbjct: 193 SDVWSFGILLMEIVTYGRIP 212
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 774 IGTGSSGVVYRVTIPNGET-LAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLGWGSN 831
+G G G V+ + NG T +AVK + S AF +E + ++H+ +VRL +
Sbjct: 31 LGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 89
Query: 832 KNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDV 891
+ + ++ +Y+ NGSL L ++ +A +A++ +H D+
Sbjct: 90 EPIYII-TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDL 145
Query: 892 KAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITE 951
+A N+L+ +ADFGLAR++ +DN + R + APE + T
Sbjct: 146 RAANILVSDTLSCKIADFGLARLI----EDN--EYTAREGAKFPIKWTAPEAINYGTFTI 199
Query: 952 KSDVYSFGVVLLEVLT-GRHP 971
KSDV+SFG++L E++T GR P
Sbjct: 200 KSDVWSFGILLTEIVTHGRIP 220
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 38/224 (16%)
Query: 774 IGTGSSGVVYRVT----IPNGETL--AVKKMWSSDESGA--FSSEIQTLGSIRHKNIVRL 825
+G G+ G V+ +P + + AVK + + ES F E + L ++H++IVR
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 826 LGWGSNKNLKLLFYDYLPNGSLSSLLHGAG------KGGAD-----------WEARYEVV 868
G + L+ ++Y+ +G L+ L G GG D +V
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 869 LGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQ 928
G+ + LA LH +H D+ N L+G G + DFG++R + + + +
Sbjct: 146 AGMVY-LAGLH------FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST---DYYRVGG 195
Query: 929 RPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
R L +M PE ++ T +SDV+SFGVVL E+ T G+ P
Sbjct: 196 RTMLP--IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 38/224 (16%)
Query: 774 IGTGSSGVVYRVT----IPNGETL--AVKKMWSSDESGA--FSSEIQTLGSIRHKNIVRL 825
+G G+ G V+ +P + + AVK + + ES F E + L ++H++IVR
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 826 LGWGSNKNLKLLFYDYLPNGSLSSLLHGAG------KGGAD-----------WEARYEVV 868
G + L+ ++Y+ +G L+ L G GG D +V
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 869 LGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQ 928
G+ + LA LH +H D+ N L+G G + DFG++R + + + +
Sbjct: 140 AGMVY-LAGLH------FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST---DYYRVGG 189
Query: 929 RPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
R L +M PE ++ T +SDV+SFGVVL E+ T G+ P
Sbjct: 190 RTMLP--IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 101/227 (44%), Gaps = 41/227 (18%)
Query: 764 VVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAF-SSEIQTLGSIRHKNI 822
V +T +G G G V+R + GE +AVK S DE F +E+ +RH+NI
Sbjct: 6 VAHQITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENI 64
Query: 823 VRLLG-----WGSNKNLKLL--------FYDYLPNGSLSSLLHGAGKGGADWEARYEVVL 869
+ + S+ L L+ YDYL +L ++ + +VL
Sbjct: 65 LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV------------SCLRIVL 112
Query: 870 GVAHALAYLHHDCM-----PPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
+A LA+LH + P I H D+K+ N+L+ Q +AD GLA + S S +
Sbjct: 113 SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDV 172
Query: 925 KTNQRPQLAGSYGYMAPE------HASMQRITEKSDVYSFGVVLLEV 965
N R G+ YMAPE ++ D+++FG+VL EV
Sbjct: 173 GNNPR---VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 16/215 (7%)
Query: 760 SIDDVVRNLTSANVIGTGSSGVVYR-VTIPNGETLAVKKM--WSSDESGAFSSEIQTLGS 816
S+ D + T IG G+SG VY + + G+ +A+++M + +EI +
Sbjct: 15 SVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 74
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALA 876
++ NIV L + + +YL GSL+ ++ A V AL
Sbjct: 75 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA---VCRECLQALE 131
Query: 877 YLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSY 936
+LH + ++H D+K+ N+LLG L DFG ++ + ++R + G+
Sbjct: 132 FLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT-------PEQSKRSXMVGTP 181
Query: 937 GYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHP 971
+MAPE + + K D++S G++ +E++ G P
Sbjct: 182 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 63/235 (26%), Positives = 108/235 (45%), Gaps = 27/235 (11%)
Query: 747 DTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYR-VTIPNGETLAVKKMWSSD-ES 804
D WEM ++ D +T + +G G G VY V T+AVK + E
Sbjct: 4 DKWEM---ERTD---------ITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEV 51
Query: 805 GAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR 864
F E + I+H N+V+LLG + + + +++ G+L L +
Sbjct: 52 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 865 YEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
+ ++ A+ YL +H D+ A N L+G + +ADFGL+R++ +GD +
Sbjct: 112 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTXTA 166
Query: 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHP---LDPT 975
+ + + APE + + + KSDV++FGV+L E+ T G P +DP+
Sbjct: 167 HAGAKFPIK----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPS 217
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 11/200 (5%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLGWGSNK 832
+G G G V+ N +AVK + S AF E + +++H +VRL + +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKE 79
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ +++ GSL L G + +A +AY+ +H D++
Sbjct: 80 EPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLR 136
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
A NVL+ +ADFGLAR++ +DN + R + APE + T K
Sbjct: 137 AANVLVSESLMCKIADFGLARVI----EDN--EYTAREGAKFPIKWTAPEAINFGCFTIK 190
Query: 953 SDVYSFGVVLLEVLT-GRHP 971
S+V+SFG++L E++T G+ P
Sbjct: 191 SNVWSFGILLYEIVTYGKIP 210
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 28/213 (13%)
Query: 773 VIGTGSSGVVY--RVTIPNGETLAV-----KKMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
VIG G G V R+ +P + V K ++ + F SE +G H NI+ L
Sbjct: 36 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 95
Query: 826 LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVV------LGVAHALAYLH 879
G + ++ +Y+ NGSL + L + R+ V+ G+ + YL
Sbjct: 96 EGVVTKCKPVMIITEYMENGSLDAFLRKN-------DGRFTVIQLVGMLRGIGSGMKYLS 148
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
M + H D+ A N+L+ ++DFG++R++ D + T + ++ +
Sbjct: 149 D--MSAV-HRDLAARNILVNSNLVCKVSDFGMSRVL--EDDPEAAYTTRGGKI--PIRWT 201
Query: 940 APEHASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
APE + ++ T SDV+S+G+V+ EV++ G P
Sbjct: 202 APEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 28/213 (13%)
Query: 773 VIGTGSSGVVY--RVTIPNGETLAV-----KKMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
VIG G G V R+ +P + V K ++ + F SE +G H NI+ L
Sbjct: 15 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 74
Query: 826 LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVV------LGVAHALAYLH 879
G + ++ +Y+ NGSL + L + R+ V+ G+ + YL
Sbjct: 75 EGVVTKCKPVMIITEYMENGSLDAFLRKN-------DGRFTVIQLVGMLRGIGSGMKYLS 127
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+H D+ A N+L+ ++DFG++R++ D + T + ++ +
Sbjct: 128 D---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVL--EDDPEAAYTTRGGKI--PIRWT 180
Query: 940 APEHASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
APE + ++ T SDV+S+G+V+ EV++ G P
Sbjct: 181 APEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 28/213 (13%)
Query: 773 VIGTGSSGVVY--RVTIPNGETLAV-----KKMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
VIG G G V R+ +P + V K ++ + F SE +G H NI+ L
Sbjct: 21 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 80
Query: 826 LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVV------LGVAHALAYLH 879
G + ++ +Y+ NGSL + L + R+ V+ G+ + YL
Sbjct: 81 EGVVTKCKPVMIITEYMENGSLDAFLRKN-------DGRFTVIQLVGMLRGIGSGMKYLS 133
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+H D+ A N+L+ ++DFG++R++ D + T + ++ +
Sbjct: 134 D---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVL--EDDPEAAYTTRGGKI--PIRWT 186
Query: 940 APEHASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
APE + ++ T SDV+S+G+V+ EV++ G P
Sbjct: 187 APEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 59/223 (26%), Positives = 103/223 (46%), Gaps = 23/223 (10%)
Query: 747 DTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYR-VTIPNGETLAVKKMWSSD-ES 804
D WEM ++ D +T + +G G G VY V T+AVK + E
Sbjct: 7 DKWEM---ERTD---------ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV 54
Query: 805 GAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR 864
F E + I+H N+V+LLG + + + +++ G+L L + +
Sbjct: 55 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL 114
Query: 865 YEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
+ ++ A+ YL +H D+ A N L+G + +ADFGL+R++ +GD +
Sbjct: 115 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTXTA 169
Query: 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+ + + APE + + + KSDV++FGV+L E+ T
Sbjct: 170 HAGAKFPIK----WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 16/215 (7%)
Query: 760 SIDDVVRNLTSANVIGTGSSGVVYR-VTIPNGETLAVKKM--WSSDESGAFSSEIQTLGS 816
S+ D + T IG G+SG VY + + G+ +A+++M + +EI +
Sbjct: 14 SVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 73
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALA 876
++ NIV L + + +YL GSL+ ++ A V AL
Sbjct: 74 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA---VCRECLQALE 130
Query: 877 YLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSY 936
+LH + ++H D+K+ N+LLG L DFG ++ + ++R + G+
Sbjct: 131 FLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT-------PEQSKRSXMVGTP 180
Query: 937 GYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHP 971
+MAPE + + K D++S G++ +E++ G P
Sbjct: 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLGWGSNK 832
+G G G V+ T +AVK M S AF +E + +++H +V+L + +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKE 255
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ ++ +++ GSL L + +A +A++ +H D++
Sbjct: 256 PIYII-TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY---IHRDLR 311
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
A N+L+ +ADFGLAR++ +DN + R + APE + T K
Sbjct: 312 AANILVSASLVCKIADFGLARVI----EDN--EYTAREGAKFPIKWTAPEAINFGSFTIK 365
Query: 953 SDVYSFGVVLLEVLT-GRHP 971
SDV+SFG++L+E++T GR P
Sbjct: 366 SDVWSFGILLMEIVTYGRIP 385
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 68.2 bits (165), Expect = 3e-11, Method: Composition-based stats.
Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 25/224 (11%)
Query: 747 DTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYR-VTIPNGETLAVKKMWSSD-ES 804
D WEM ++ D +T + +G G G VY V T+AVK + E
Sbjct: 7 DKWEM---ERTD---------ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV 54
Query: 805 GAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR 864
F E + I+H N+V+LLG + + + +++ G+L L + +
Sbjct: 55 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 114
Query: 865 YEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
+ ++ A+ YL +H D+ A N L+G + +ADFGL+R+++G
Sbjct: 115 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD------ 165
Query: 925 KTNQRPQLAG-SYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
T P A + APE + + + KSDV++FGV+L E+ T
Sbjct: 166 -TYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 68.2 bits (165), Expect = 3e-11, Method: Composition-based stats.
Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 25/224 (11%)
Query: 747 DTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYR-VTIPNGETLAVKKMWSSD-ES 804
D WEM ++ D +T + +G G G VY V T+AVK + E
Sbjct: 8 DKWEM---ERTD---------ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV 55
Query: 805 GAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR 864
F E + I+H N+V+LLG + + + +++ G+L L + +
Sbjct: 56 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 865 YEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
+ ++ A+ YL +H D+ A N L+G + +ADFGL+R+++G
Sbjct: 116 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD------ 166
Query: 925 KTNQRPQLAG-SYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
T P A + APE + + + KSDV++FGV+L E+ T
Sbjct: 167 -TYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 24/230 (10%)
Query: 764 VVRNLTS----ANVIGTGSSGVVYRVT-IPNGETLAVKKMWSSDESGAFS----SEIQTL 814
+V N++S +++G G+ GVV T P GE +A+KK+ D+ F+ EI+ L
Sbjct: 5 IVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKP-LFALRTLREIKIL 63
Query: 815 GSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHG--AGKGGADWEARYEVVLGVA 872
+H+NI+ + + + Y+ + + LH + + +D +Y +
Sbjct: 64 KHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-FIYQTL 122
Query: 873 HALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP-- 930
A+ LH ++H D+K N+L+ + DFGLARI+ S DN T Q+
Sbjct: 123 RAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 931 -QLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978
+ + Y APE + + + DV+S G +L E+ R P PG
Sbjct: 180 VEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR----PIFPG 225
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 16/215 (7%)
Query: 760 SIDDVVRNLTSANVIGTGSSGVVYR-VTIPNGETLAVKKM--WSSDESGAFSSEIQTLGS 816
S+ D + T IG G+SG VY + + G+ +A+++M + +EI +
Sbjct: 14 SVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 73
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALA 876
++ NIV L + + +YL GSL+ ++ A V AL
Sbjct: 74 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA---VCRECLQALE 130
Query: 877 YLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSY 936
+LH + ++H D+K+ N+LLG L DFG ++ + ++R + G+
Sbjct: 131 FLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT-------PEQSKRSTMVGTP 180
Query: 937 GYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHP 971
+MAPE + + K D++S G++ +E++ G P
Sbjct: 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 59/223 (26%), Positives = 103/223 (46%), Gaps = 23/223 (10%)
Query: 747 DTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYR-VTIPNGETLAVKKMWSSD-ES 804
D WEM ++ D +T + +G G G VY V T+AVK + E
Sbjct: 11 DKWEM---ERTD---------ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV 58
Query: 805 GAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR 864
F E + I+H N+V+LLG + + + +++ G+L L + +
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 865 YEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
+ ++ A+ YL +H D+ A N L+G + +ADFGL+R++ +GD +
Sbjct: 119 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTXTA 173
Query: 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+ + + APE + + + KSDV++FGV+L E+ T
Sbjct: 174 HAGAKFPIK----WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 38/224 (16%)
Query: 774 IGTGSSGVVYRVT----IPNGETL--AVKKMWSSDESGA--FSSEIQTLGSIRHKNIVRL 825
+G G+ G V+ +P + + AVK + + ES F E + L ++H++IVR
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 826 LGWGSNKNLKLLFYDYLPNGSLSSLLHGAG------KGGAD-----------WEARYEVV 868
G + L+ ++Y+ +G L+ L G GG D +V
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 869 LGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQ 928
G+ + LA LH +H D+ N L+G G + DFG++R + + + +
Sbjct: 169 AGMVY-LAGLH------FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST---DYYRVGG 218
Query: 929 RPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
R L +M PE ++ T +SDV+SFGVVL E+ T G+ P
Sbjct: 219 RTMLP--IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 28/208 (13%)
Query: 774 IGTGSSGVVYRVT-IPNGETLAVKKM----WSSDESGAFSSEIQTLGSIRHKNIVRLLGW 828
IGTGS G ++ +G+ L K++ + E SE+ L ++H NIVR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 829 GSNKNLKLLF--YDYLPNGSLSSLLHGAGKGGADWEARY---EVVLGVAHALAYLHHDCM 883
++ L+ +Y G L+S++ K E +Y E VL V L +C
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTK-----ERQYLDEEFVLRVMTQLTLALKECH 128
Query: 884 P------PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYG 937
+LH D+K NV L L DFGLARI+ + D++ +K + G+
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDEDFAK-----EFVGTPY 181
Query: 938 YMAPEHASMQRITEKSDVYSFGVVLLEV 965
YM+PE + EKSD++S G +L E+
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 63/235 (26%), Positives = 108/235 (45%), Gaps = 27/235 (11%)
Query: 747 DTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYR-VTIPNGETLAVKKMWSSD-ES 804
D WEM ++ D +T + +G G G VY V T+AVK + E
Sbjct: 4 DKWEM---ERTD---------ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV 51
Query: 805 GAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR 864
F E + I+H N+V+LLG + + + +++ G+L L +
Sbjct: 52 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 865 YEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
+ ++ A+ YL +H D+ A N L+G + +ADFGL+R++ +GD +
Sbjct: 112 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTFTA 166
Query: 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHP---LDPT 975
+ + + APE + + + KSDV++FGV+L E+ T G P +DP+
Sbjct: 167 HAGAKFPIK----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPS 217
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 57/183 (31%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 790 GETLAVKKMWSSDESGA--FSSEIQTLGSIRHKNIVRLLG---WGSNKNLKLLFYDYLPN 844
GE +AVKK+ S E F EI+ L S++H NIV+ G +NLKL+ ++LP
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EFLPY 100
Query: 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQA 904
GSL L K D + + + YL +H D+ N+L+ +
Sbjct: 101 GSLREYLQ-KHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRV 156
Query: 905 YLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLE 964
+ DFGL +++ D + P + + Y APE + + + SDV+SFGVVL E
Sbjct: 157 KIGDFGLTKVLP---QDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYE 212
Query: 965 VLT 967
+ T
Sbjct: 213 LFT 215
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 28/208 (13%)
Query: 774 IGTGSSGVVYRVT-IPNGETLAVKKM----WSSDESGAFSSEIQTLGSIRHKNIVRLLGW 828
IGTGS G ++ +G+ L K++ + E SE+ L ++H NIVR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 829 GSNKNLKLLF--YDYLPNGSLSSLLHGAGKGGADWEARY---EVVLGVAHALAYLHHDCM 883
++ L+ +Y G L+S++ K E +Y E VL V L +C
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTK-----ERQYLDEEFVLRVMTQLTLALKECH 128
Query: 884 P------PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYG 937
+LH D+K NV L L DFGLARI+ + D + +KT G+
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSFAKT-----FVGTPY 181
Query: 938 YMAPEHASMQRITEKSDVYSFGVVLLEV 965
YM+PE + EKSD++S G +L E+
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 59/223 (26%), Positives = 103/223 (46%), Gaps = 23/223 (10%)
Query: 747 DTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYR-VTIPNGETLAVKKMWSSD-ES 804
D WEM ++ D +T + +G G G VY V T+AVK + E
Sbjct: 11 DKWEM---ERTD---------ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV 58
Query: 805 GAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR 864
F E + I+H N+V+LLG + + + +++ G+L L + +
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 865 YEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
+ ++ A+ YL +H D+ A N L+G + +ADFGL+R++ +GD +
Sbjct: 119 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTA 173
Query: 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+ + + APE + + + KSDV++FGV+L E+ T
Sbjct: 174 HAGAKFPIK----WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 59/183 (32%), Positives = 88/183 (48%), Gaps = 14/183 (7%)
Query: 790 GETLAVKKMWSSDESGA--FSSEIQTLGSIRHKNIVRLLG---WGSNKNLKLLFYDYLPN 844
GE +AVKK+ S E F EI+ L S++H NIV+ G +NLKL+ +YLP
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPY 97
Query: 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQA 904
GSL L K D + + + YL +H D+ N+L+ +
Sbjct: 98 GSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRV 153
Query: 905 YLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLE 964
+ DFGL +++ D K + P + + Y APE + + + SDV+SFGVVL E
Sbjct: 154 KIGDFGLTKVLPQ--DKEFFKVKE-PGESPIFWY-APESLTESKFSVASDVWSFGVVLYE 209
Query: 965 VLT 967
+ T
Sbjct: 210 LFT 212
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 59/223 (26%), Positives = 103/223 (46%), Gaps = 23/223 (10%)
Query: 747 DTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYR-VTIPNGETLAVKKMWSSD-ES 804
D WEM ++ D +T + +G G G VY V T+AVK + E
Sbjct: 11 DKWEM---ERTD---------ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV 58
Query: 805 GAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR 864
F E + I+H N+V+LLG + + + +++ G+L L + +
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 865 YEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
+ ++ A+ YL +H D+ A N L+G + +ADFGL+R++ +GD +
Sbjct: 119 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTA 173
Query: 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+ + + APE + + + KSDV++FGV+L E+ T
Sbjct: 174 HAGAKFPIK----WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 59/223 (26%), Positives = 103/223 (46%), Gaps = 23/223 (10%)
Query: 747 DTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYR-VTIPNGETLAVKKMWSSD-ES 804
D WEM ++ D +T + +G G G VY V T+AVK + E
Sbjct: 19 DKWEM---ERTD---------ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV 66
Query: 805 GAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR 864
F E + I+H N+V+LLG + + + +++ G+L L + +
Sbjct: 67 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 126
Query: 865 YEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
+ ++ A+ YL +H D+ A N L+G + +ADFGL+R++ +GD +
Sbjct: 127 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTA 181
Query: 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+ + + APE + + + KSDV++FGV+L E+ T
Sbjct: 182 HAGAKFPIK----WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 59/223 (26%), Positives = 103/223 (46%), Gaps = 23/223 (10%)
Query: 747 DTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYR-VTIPNGETLAVKKMWSSD-ES 804
D WEM ++ D +T + +G G G VY V T+AVK + E
Sbjct: 11 DKWEM---ERTD---------ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV 58
Query: 805 GAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR 864
F E + I+H N+V+LLG + + + +++ G+L L + +
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 865 YEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
+ ++ A+ YL +H D+ A N L+G + +ADFGL+R++ +GD +
Sbjct: 119 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTA 173
Query: 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+ + + APE + + + KSDV++FGV+L E+ T
Sbjct: 174 HAGAKFPIK----WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 59/223 (26%), Positives = 103/223 (46%), Gaps = 23/223 (10%)
Query: 747 DTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYR-VTIPNGETLAVKKMWSSD-ES 804
D WEM ++ D +T + +G G G VY V T+AVK + E
Sbjct: 6 DKWEM---ERTD---------ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV 53
Query: 805 GAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR 864
F E + I+H N+V+LLG + + + +++ G+L L + +
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 113
Query: 865 YEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
+ ++ A+ YL +H D+ A N L+G + +ADFGL+R++ +GD +
Sbjct: 114 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTA 168
Query: 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+ + + APE + + + KSDV++FGV+L E+ T
Sbjct: 169 HAGAKFPIK----WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 59/223 (26%), Positives = 103/223 (46%), Gaps = 23/223 (10%)
Query: 747 DTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYR-VTIPNGETLAVKKMWSSD-ES 804
D WEM ++ D +T + +G G G VY V T+AVK + E
Sbjct: 10 DKWEM---ERTD---------ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV 57
Query: 805 GAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR 864
F E + I+H N+V+LLG + + + +++ G+L L + +
Sbjct: 58 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 117
Query: 865 YEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
+ ++ A+ YL +H D+ A N L+G + +ADFGL+R++ +GD +
Sbjct: 118 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTA 172
Query: 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+ + + APE + + + KSDV++FGV+L E+ T
Sbjct: 173 HAGAKFPIK----WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 59/223 (26%), Positives = 103/223 (46%), Gaps = 23/223 (10%)
Query: 747 DTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYR-VTIPNGETLAVKKMWSSD-ES 804
D WEM ++ D +T + +G G G VY V T+AVK + E
Sbjct: 6 DKWEM---ERTD---------ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV 53
Query: 805 GAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR 864
F E + I+H N+V+LLG + + + +++ G+L L + +
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 113
Query: 865 YEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
+ ++ A+ YL +H D+ A N L+G + +ADFGL+R++ +GD +
Sbjct: 114 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTA 168
Query: 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+ + + APE + + + KSDV++FGV+L E+ T
Sbjct: 169 HAGAKFPIK----WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 59/223 (26%), Positives = 103/223 (46%), Gaps = 23/223 (10%)
Query: 747 DTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYR-VTIPNGETLAVKKMWSSD-ES 804
D WEM ++ D +T + +G G G VY V T+AVK + E
Sbjct: 8 DKWEM---ERTD---------ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV 55
Query: 805 GAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR 864
F E + I+H N+V+LLG + + + +++ G+L L + +
Sbjct: 56 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 865 YEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
+ ++ A+ YL +H D+ A N L+G + +ADFGL+R++ +GD +
Sbjct: 116 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTA 170
Query: 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+ + + APE + + + KSDV++FGV+L E+ T
Sbjct: 171 HAGAKFPIK----WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 59/223 (26%), Positives = 103/223 (46%), Gaps = 23/223 (10%)
Query: 747 DTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYR-VTIPNGETLAVKKMWSSD-ES 804
D WEM ++ D +T + +G G G VY V T+AVK + E
Sbjct: 8 DKWEM---ERTD---------ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV 55
Query: 805 GAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR 864
F E + I+H N+V+LLG + + + +++ G+L L + +
Sbjct: 56 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 865 YEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
+ ++ A+ YL +H D+ A N L+G + +ADFGL+R++ +GD +
Sbjct: 116 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTA 170
Query: 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+ + + APE + + + KSDV++FGV+L E+ T
Sbjct: 171 HAGAKFPIK----WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 24/230 (10%)
Query: 764 VVRNLTS----ANVIGTGSSGVVYRVT-IPNGETLAVKKMWSSDESGAFS----SEIQTL 814
+V N++S +++G G+ GVV T P GE +A+KK+ D+ F+ EI+ L
Sbjct: 5 IVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKP-LFALRTLREIKIL 63
Query: 815 GSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHG--AGKGGADWEARYEVVLGVA 872
+H+NI+ + + + Y+ + + LH + + +D +Y +
Sbjct: 64 KHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-FIYQTL 122
Query: 873 HALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQR--- 929
A+ LH ++H D+K N+L+ + DFGLARI+ S DN T Q+
Sbjct: 123 RAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 930 PQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978
+ + Y APE + + + DV+S G +L E+ R P PG
Sbjct: 180 TEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR----PIFPG 225
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 24/230 (10%)
Query: 764 VVRNLTS----ANVIGTGSSGVVYRVT-IPNGETLAVKKMWSSDESGAFS----SEIQTL 814
+V N++S +++G G+ GVV T P GE +A+KK+ D+ F+ EI+ L
Sbjct: 5 IVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKP-LFALRTLREIKIL 63
Query: 815 GSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHG--AGKGGADWEARYEVVLGVA 872
+H+NI+ + + + Y+ + + LH + + +D +Y +
Sbjct: 64 KHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-FIYQTL 122
Query: 873 HALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQR--- 929
A+ LH ++H D+K N+L+ + DFGLARI+ S DN T Q+
Sbjct: 123 RAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 930 PQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978
+ + Y APE + + + DV+S G +L E+ R P PG
Sbjct: 180 TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR----PIFPG 225
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 18/210 (8%)
Query: 772 NVIGTGSSGVVY--RVTIPNGETLAV-----KKMWSSDESGAFSSEIQTLGSIRHKNIVR 824
VIG G G V + +P + V K ++ + F SE +G H N++
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 825 LLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
L G + ++ +++ NGSL S L G ++ G+A + YL
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFLR-QNDGQFTVIQLVGMLRGIAAGMKYLAD---M 154
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGS--YGYMAPE 942
+H D+ A N+L+ ++DFGL+R + +D+ S L G + APE
Sbjct: 155 NYVHRDLAARNILVNSNLVCKVSDFGLSRFL----EDDTSDPTYTSALGGKIPIRWTAPE 210
Query: 943 HASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
++ T SDV+S+G+V+ EV++ G P
Sbjct: 211 AIQYRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 22/229 (9%)
Query: 751 MTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYRVT-IPNGETLAVKKMWSSDESGAFSS 809
+T QK+ DD ++ +G G+ GVV++V+ P+G +A +K+ + A +
Sbjct: 56 LTQKQKVGELKDDDFEKISE---LGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIRN 111
Query: 810 ----EIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARY 865
E+Q L IV G + + +++ GSL +L AG+ +
Sbjct: 112 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILG 169
Query: 866 EVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSK 925
+V + V L YL I+H DVK N+L+ + L DFG VSG D+ +
Sbjct: 170 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMAN 223
Query: 926 TNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974
+ G+ YM+PE + +SD++S G+ L+E+ GR+P+ P
Sbjct: 224 S-----FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 267
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 67.0 bits (162), Expect = 5e-11, Method: Composition-based stats.
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 23/223 (10%)
Query: 747 DTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYR-VTIPNGETLAVKKMWSSD-ES 804
D WEM ++ D +T + +G G G VY V T+AVK + E
Sbjct: 6 DKWEM---ERTD---------ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV 53
Query: 805 GAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR 864
F E + I+H N+V+LLG + + + +++ G+L L +
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 865 YEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
+ ++ A+ YL +H D+ A N L+G + +ADFGL+R++ +GD +
Sbjct: 114 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTA 168
Query: 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+ + + APE + + + KSDV++FGV+L E+ T
Sbjct: 169 HAGAKFPIK----WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 67.0 bits (162), Expect = 5e-11, Method: Composition-based stats.
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 23/223 (10%)
Query: 747 DTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYR-VTIPNGETLAVKKMWSSD-ES 804
D WEM ++ D +T + +G G G VY V T+AVK + E
Sbjct: 6 DKWEM---ERTD---------ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV 53
Query: 805 GAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR 864
F E + I+H N+V+LLG + + + +++ G+L L +
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 865 YEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
+ ++ A+ YL +H D+ A N L+G + +ADFGL+R++ +GD +
Sbjct: 114 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTA 168
Query: 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+ + + APE + + + KSDV++FGV+L E+ T
Sbjct: 169 HAGAKFPIK----WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 67.0 bits (162), Expect = 5e-11, Method: Composition-based stats.
Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 16/212 (7%)
Query: 768 LTSANVIGTGSSGVVY--RVTIPNGETLAV-----KKMWSSDESGAFSSEIQTLGSIRHK 820
+T VIG G G V R+ +P L V K ++ + F E +G H
Sbjct: 24 ITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 83
Query: 821 NIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHH 880
NI+ L G + ++ +Y+ NGSL + L G ++ G++ + YL
Sbjct: 84 NIIHLEGVVTKSKPVMIVTEYMENGSLDTFLK-KNDGQFTVIQLVGMLRGISAGMKYLSD 142
Query: 881 DCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMA 940
+H D+ A N+L+ ++DFGL+R++ D + T + ++ + A
Sbjct: 143 ---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIP--IRWTA 195
Query: 941 PEHASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
PE + ++ T SDV+S+G+V+ EV++ G P
Sbjct: 196 PEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 67.0 bits (162), Expect = 5e-11, Method: Composition-based stats.
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 23/223 (10%)
Query: 747 DTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYR-VTIPNGETLAVKKMWSSD-ES 804
D WEM ++ D +T + +G G G VY V T+AVK + E
Sbjct: 6 DKWEM---ERTD---------ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV 53
Query: 805 GAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR 864
F E + I+H N+V+LLG + + + +++ G+L L +
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 865 YEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
+ ++ A+ YL +H D+ A N L+G + +ADFGL+R++ +GD +
Sbjct: 114 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTA 168
Query: 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+ + + APE + + + KSDV++FGV+L E+ T
Sbjct: 169 HAGAKFPIK----WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 67.0 bits (162), Expect = 5e-11, Method: Composition-based stats.
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 23/223 (10%)
Query: 747 DTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYR-VTIPNGETLAVKKMWSSD-ES 804
D WEM ++ D +T + +G G G VY V T+AVK + E
Sbjct: 6 DKWEM---ERTD---------ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV 53
Query: 805 GAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR 864
F E + I+H N+V+LLG + + + +++ G+L L +
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 865 YEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
+ ++ A+ YL +H D+ A N L+G + +ADFGL+R++ +GD +
Sbjct: 114 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTA 168
Query: 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+ + + APE + + + KSDV++FGV+L E+ T
Sbjct: 169 HAGAKFPIK----WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 67.0 bits (162), Expect = 5e-11, Method: Composition-based stats.
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 23/223 (10%)
Query: 747 DTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYR-VTIPNGETLAVKKMWSSD-ES 804
D WEM ++ D +T + +G G G VY V T+AVK + E
Sbjct: 11 DKWEM---ERTD---------ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV 58
Query: 805 GAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR 864
F E + I+H N+V+LLG + + + +++ G+L L +
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 118
Query: 865 YEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
+ ++ A+ YL +H D+ A N L+G + +ADFGL+R++ +GD +
Sbjct: 119 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTA 173
Query: 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+ + + APE + + + KSDV++FGV+L E+ T
Sbjct: 174 HAGAKFPIK----WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 112/245 (45%), Gaps = 28/245 (11%)
Query: 751 MTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYRVT-IPNGETLAVKKMWSSDESGAFSS 809
+T QK+ DD ++ +G G+ GVV++V+ P+G +A +K+ + A +
Sbjct: 21 LTQKQKVGELKDDDFEKISE---LGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIRN 76
Query: 810 ----EIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARY 865
E+Q L IV G + + +++ GSL +L AG+ +
Sbjct: 77 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILG 134
Query: 866 EVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSK 925
+V + V L YL I+H DVK N+L+ + L DFG VSG D+ +
Sbjct: 135 KVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMAN 188
Query: 926 TNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQW 985
+ G+ YM+PE + +SD++S G+ L+E+ GR+P+ P P +
Sbjct: 189 S-----FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP------PDAKE 237
Query: 986 TPLMF 990
LMF
Sbjct: 238 LELMF 242
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 66.6 bits (161), Expect = 7e-11, Method: Composition-based stats.
Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 756 KLDFSIDD--VVRNLTSANVIGTGSSGVVYRV-TIPNGETLAVKKMWSS--DESGA---F 807
K F+IDD +VR L G G G VY N +A+K ++ S ++ G
Sbjct: 8 KRKFTIDDFDIVRPL------GKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQL 61
Query: 808 SSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEV 867
EI+ +RH NI+R+ + ++ L ++ P G L L G+ A +
Sbjct: 62 RREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME 121
Query: 868 VLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927
L A AL Y H ++H D+K N+L+G + +ADFG + + +
Sbjct: 122 EL--ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSV---------HAPSL 167
Query: 928 QRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLD 973
+R + G+ Y+ PE + EK D++ GV+ E L G P D
Sbjct: 168 RRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 21/210 (10%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGSIRHKNIVRLLGWG 829
IG G+ GVVY+ GET A+KK+ E S EI L ++H NIV+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 830 SNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHG 889
K +L +++L + L LL +GG + +L + + +AY H +LH
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLL-DVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHR 124
Query: 890 DVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEH-ASMQR 948
D+K N+L+ + +ADFGLAR + + Y AP+ ++
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAFG-------IPVRKYTHEVVTLWYRAPDVLMGSKK 177
Query: 949 ITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978
+ D++S G + E++ G P PG
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG----TPLFPG 203
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 23/218 (10%)
Query: 764 VVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAF-SSEIQTLGSIRHKNI 822
+ R + IG G G V+R GE +AVK S +E F +EI +RH+NI
Sbjct: 40 IARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI 98
Query: 823 VRLLGWGSNKN----LKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYL 878
+ + + N L DY +GSL L+ + E ++ L A LA+L
Sbjct: 99 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHL 155
Query: 879 HHDCM-----PPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
H + + P I H D+K+ N+L+ +AD GLA + D N R
Sbjct: 156 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR---V 212
Query: 934 GSYGYMAPE----HASMQRIT--EKSDVYSFGVVLLEV 965
G+ YMAPE +M+ +++D+Y+ G+V E+
Sbjct: 213 GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 66.2 bits (160), Expect = 7e-11, Method: Composition-based stats.
Identities = 57/201 (28%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 774 IGTGSSGVVYRVTIPNGET-LAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLGWGSN 831
+G G G V+ + NG T +AVK + S AF +E + ++H+ +VRL +
Sbjct: 17 LGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 832 KNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDV 891
+ + ++ +Y+ NGSL L ++ +A +A++ +H ++
Sbjct: 76 EPIYII-TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRNL 131
Query: 892 KAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITE 951
+A N+L+ +ADFGLAR++ +DN + R + APE + T
Sbjct: 132 RAANILVSDTLSCKIADFGLARLI----EDN--EYTAREGAKFPIKWTAPEAINYGTFTI 185
Query: 952 KSDVYSFGVVLLEVLT-GRHP 971
KSDV+SFG++L E++T GR P
Sbjct: 186 KSDVWSFGILLTEIVTHGRIP 206
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 101/219 (46%), Gaps = 16/219 (7%)
Query: 756 KLDFSIDDVVRNLTSANVIGTGSSGVVYR-VTIPNGETLAVKKM--WSSDESGAFSSEIQ 812
++ S+ D + T IG G+SG VY + + G+ +A+++M + +EI
Sbjct: 11 RIIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEIL 70
Query: 813 TLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVA 872
+ ++ NIV L + + +YL GSL+ ++ A V
Sbjct: 71 VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA---VCRECL 127
Query: 873 HALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQL 932
AL +LH + ++H ++K+ N+LLG L DFG ++ + ++R +
Sbjct: 128 QALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQIT-------PEQSKRSTM 177
Query: 933 AGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHP 971
G+ +MAPE + + K D++S G++ +E++ G P
Sbjct: 178 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 66.2 bits (160), Expect = 8e-11, Method: Composition-based stats.
Identities = 57/183 (31%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 790 GETLAVKKMWSSDESGA--FSSEIQTLGSIRHKNIVRLLG---WGSNKNLKLLFYDYLPN 844
GE +AVKK+ S E F EI+ L S++H NIV+ G +NLKL+ +YLP
Sbjct: 40 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPY 98
Query: 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQA 904
GSL L K D + + + YL +H ++ N+L+ +
Sbjct: 99 GSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRNLATRNILVENENRV 154
Query: 905 YLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLE 964
+ DFGL +++ D + P + + Y APE + + + SDV+SFGVVL E
Sbjct: 155 KIGDFGLTKVLP---QDKEYYKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYE 210
Query: 965 VLT 967
+ T
Sbjct: 211 LFT 213
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 153/308 (49%), Gaps = 35/308 (11%)
Query: 126 RELTFIDLSGNSLWGEIPTEVCRLRKLESLYLNTNLLEGEIPSDIGNLSSLAYLTLYDNQ 185
LT I+ S N L P + L KL + +N N + P + NL++L LTL++NQ
Sbjct: 63 NNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQ 118
Query: 186 LSGKIP-KSIGALSKLQVFRAGGNQNLKGELPWEIGNCSNLVMLGLAETSISGNVP-SSI 243
++ P K++ L++L++ + N ++ G ++L L + ++ P +++
Sbjct: 119 ITDIDPLKNLTNLNRLEL-----SSNTISDISALSG-LTSLQQLSFSSNQVTDLKPLANL 172
Query: 244 GMLERIQTIAIYTSLLSGPIPEEIGNCSELQNLYLYQNSISGPIPGRIGALSKLKSLLLW 303
LER+ + S +S + + L++L N IS P +G L+ L L L
Sbjct: 173 TTLERLDISSNKVSDIS-----VLAKLTNLESLIATNNQISDITP--LGILTNLDELSLN 225
Query: 304 QNSL--VGAIPDELGSCTELTVVDFSDNLLTGSIPRSFGNLLKLQELQLSVNQLSGTIPI 361
N L +G L S T LT +D ++N ++ P S L KL EL+L NQ+S P
Sbjct: 226 GNQLKDIGT----LASLTNLTDLDLANNQISNLAPLS--GLTKLTELKLGANQISNISP- 278
Query: 362 EIATCTALTHLEIDNNAISGEIP-ADIGNINGLTLFFAWKNKLTGNIPESLSQCQELQAL 420
+A TALT+LE++ N + P +++ N+ LTL+F N ++ P +S +LQ L
Sbjct: 279 -LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYF---NNISDISP--VSSLTKLQRL 332
Query: 421 DFSYNNLS 428
FS N +S
Sbjct: 333 FFSNNKVS 340
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 99/240 (41%), Gaps = 39/240 (16%)
Query: 483 MGNLKHLNFVDMSENHLVGGIPPSVVGCQSLEFLDLHSNGLTGSVPDTLPTSLQLVDLSD 542
+ NL +LN +++S N + I ++ G SL+ L SN +T P T+L+ +D+S
Sbjct: 125 LKNLTNLNRLELSSNT-ISDIS-ALSGLTSLQQLSFSSNQVTDLKPLANLTTLERLDISS 182
Query: 543 NRLSGSLAHSIGSLTEXXXXXXXXNQLSGRIPAEIL--------------------SCRK 582
N++S + LT NQ+S P IL S
Sbjct: 183 NKVSD--ISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTN 240
Query: 583 LILLDIGNNRFSGEIPKELGQXXXXXXXXXXXXXQFSGEIPSEFSGLTKLGILDLSHNKL 642
L LD+ NN+ S P Q S P +GLT L L+L+ N+L
Sbjct: 241 LTDLDLANNQISNLAPLS---GLTKLTELKLGANQISNISP--LAGLTALTNLELNENQL 295
Query: 643 SGDLDALASLQNLVSLNVSFNDFSGELPNTPFFRKLPLSDLASNRGLYISGGVVSPTDSL 702
D+ +++L+NL L + FN+ S P+S L + L+ S VS SL
Sbjct: 296 E-DISPISNLKNLTYLTLYFNNISD---------ISPVSSLTKLQRLFFSNNKVSDVSSL 345
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 21/210 (10%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGSIRHKNIVRLLGWG 829
IG G+ GVVY+ GET A+KK+ E S EI L ++H NIV+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 830 SNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHG 889
K +L +++L + L LL +GG + +L + + +AY H +LH
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLL-DVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHR 124
Query: 890 DVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEH-ASMQR 948
D+K N+L+ + +ADFGLAR + + Y AP+ ++
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAFG-------IPVRKYTHEVVTLWYRAPDVLMGSKK 177
Query: 949 ITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978
+ D++S G + E++ G P PG
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGA----PLFPG 203
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 103/223 (46%), Gaps = 23/223 (10%)
Query: 747 DTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYR-VTIPNGETLAVKKMWSSD-ES 804
D WEM ++ D +T + +G G G VY V T+AVK + E
Sbjct: 252 DKWEM---ERTD---------ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV 299
Query: 805 GAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR 864
F E + I+H N+V+LLG + + + +++ G+L L + +
Sbjct: 300 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 359
Query: 865 YEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
+ ++ A+ YL +H ++ A N L+G + +ADFGL+R++ +GD +
Sbjct: 360 LYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLM--TGDTYTA 414
Query: 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+ + + APE + + + KSDV++FGV+L E+ T
Sbjct: 415 HAGAKFPIK----WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGSIRHKNIVRLLGWG 829
IG G+ GVVY+ GET A+KK+ E S EI L ++H NIV+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 830 SNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHG 889
K +L +++L + L LL +GG + +L + + +AY H +LH
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLL-DVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHR 124
Query: 890 DVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEH-ASMQR 948
D+K N+L+ + +ADFGLAR G T++ L Y AP+ ++
Sbjct: 125 DLKPQNLLINREGELKIADFGLAR---AFGIPVRKYTHEIVTL----WYRAPDVLMGSKK 177
Query: 949 ITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978
+ D++S G + E++ G P PG
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG----TPLFPG 203
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 66.2 bits (160), Expect = 9e-11, Method: Composition-based stats.
Identities = 61/208 (29%), Positives = 92/208 (44%), Gaps = 28/208 (13%)
Query: 774 IGTGSSGVVYRVT-IPNGETLAVKKM----WSSDESGAFSSEIQTLGSIRHKNIVRLLGW 828
IGTGS G ++ +G+ L K++ + E SE+ L ++H NIVR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 829 GSNKNLKLLF--YDYLPNGSLSSLLHGAGKGGADWEARY---EVVLGVAHALAYLHHDCM 883
++ L+ +Y G L+S++ K E +Y E VL V L +C
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTK-----ERQYLDEEFVLRVMTQLTLALKECH 128
Query: 884 P------PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYG 937
+LH D+K NV L L DFGLARI++ T+ G+
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN-------HDTSFAKAFVGTPY 181
Query: 938 YMAPEHASMQRITEKSDVYSFGVVLLEV 965
YM+PE + EKSD++S G +L E+
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 103/223 (46%), Gaps = 23/223 (10%)
Query: 747 DTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYR-VTIPNGETLAVKKMWSSD-ES 804
D WEM ++ D +T + +G G G VY V T+AVK + E
Sbjct: 210 DKWEM---ERTD---------ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV 257
Query: 805 GAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR 864
F E + I+H N+V+LLG + + + +++ G+L L + +
Sbjct: 258 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 317
Query: 865 YEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
+ ++ A+ YL +H ++ A N L+G + +ADFGL+R++ +GD +
Sbjct: 318 LYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLM--TGDTYTA 372
Query: 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+ + + APE + + + KSDV++FGV+L E+ T
Sbjct: 373 HAGAKFPIK----WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 97/223 (43%), Gaps = 25/223 (11%)
Query: 759 FSIDDVVRNLTSANVIGTGSSGVVYRVT-IPNGETLAVKKM-----WSSDESGAFSSEIQ 812
F DD + + IG GS G VY + N E +A+KKM S+++ E++
Sbjct: 47 FFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVR 106
Query: 813 TLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVA 872
L +RH N ++ G ++ L +Y GS S LL K + E V G
Sbjct: 107 FLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIA-AVTHGAL 164
Query: 873 HALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQL 932
LAYLH M +H DVKA N+LL L DFG A I++ +
Sbjct: 165 QGLAYLHSHNM---IHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN-----------XF 210
Query: 933 AGSYGYMAPE---HASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
G+ +MAPE + K DV+S G+ +E+ + PL
Sbjct: 211 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 27/213 (12%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGSIRHKNIVRLLGWG 829
+G G+ GVVY+ G +A+K++ E S EI L + H NIV L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 830 SNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR---YEVVLGVAHALAYLHHDCMPPI 886
++ L ++++ L +L G D + + Y+++ GVAH + I
Sbjct: 89 HSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR-------I 140
Query: 887 LHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEH-AS 945
LH D+K N+L+ LADFGLAR G S T++ + Y AP+
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLAR---AFGIPVRSYTHE----VVTLWYRAPDVLMG 193
Query: 946 MQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978
++ + D++S G + E++TG+ P PG
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGK----PLFPG 222
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 23/218 (10%)
Query: 764 VVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAF-SSEIQTLGSIRHKNI 822
+ R + IG G G V+R GE +AVK S +E F +EI +RH+NI
Sbjct: 27 IARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI 85
Query: 823 VRLLGWGSNKN----LKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYL 878
+ + + N L DY +GSL L+ + E ++ L A LA+L
Sbjct: 86 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHL 142
Query: 879 HHDCM-----PPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
H + + P I H D+K+ N+L+ +AD GLA + D N R
Sbjct: 143 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR---V 199
Query: 934 GSYGYMAPE----HASMQRIT--EKSDVYSFGVVLLEV 965
G+ YMAPE +M+ +++D+Y+ G+V E+
Sbjct: 200 GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 27/213 (12%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGSIRHKNIVRLLGWG 829
+G G+ GVVY+ G +A+K++ E S EI L + H NIV L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 830 SNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR---YEVVLGVAHALAYLHHDCMPPI 886
++ L ++++ L +L G D + + Y+++ GVAH + I
Sbjct: 89 HSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR-------I 140
Query: 887 LHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEH-AS 945
LH D+K N+L+ LADFGLAR G S T++ + Y AP+
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLAR---AFGIPVRSYTHE----VVTLWYRAPDVLMG 193
Query: 946 MQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978
++ + D++S G + E++TG+ P PG
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGK----PLFPG 222
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 97/223 (43%), Gaps = 25/223 (11%)
Query: 759 FSIDDVVRNLTSANVIGTGSSGVVYRVT-IPNGETLAVKKM-----WSSDESGAFSSEIQ 812
F DD + + IG GS G VY + N E +A+KKM S+++ E++
Sbjct: 8 FFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVR 67
Query: 813 TLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVA 872
L +RH N ++ G ++ L +Y GS S LL K + E V G
Sbjct: 68 FLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIA-AVTHGAL 125
Query: 873 HALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQL 932
LAYLH M +H DVKA N+LL L DFG A I++ +
Sbjct: 126 QGLAYLHSHNM---IHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN-----------XF 171
Query: 933 AGSYGYMAPE---HASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
G+ +MAPE + K DV+S G+ +E+ + PL
Sbjct: 172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 214
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 102/223 (45%), Gaps = 23/223 (10%)
Query: 747 DTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYR-VTIPNGETLAVKKMWSSD-ES 804
D WEM ++ D +T + +G G G VY V T+AVK + E
Sbjct: 213 DKWEM---ERTD---------ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV 260
Query: 805 GAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR 864
F E + I+H N+V+LLG + + + +++ G+L L +
Sbjct: 261 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 320
Query: 865 YEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
+ ++ A+ YL +H ++ A N L+G + +ADFGL+R++ +GD +
Sbjct: 321 LYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLM--TGDTYTA 375
Query: 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+ + + APE + + + KSDV++FGV+L E+ T
Sbjct: 376 HAGAKFPIK----WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 152/307 (49%), Gaps = 38/307 (12%)
Query: 126 RELTFIDLSGNSLWGEIPTEVCRLRKLESLYLNTNLLEGEIPSDIGNLSSLAYLTLYDNQ 185
LT I+ S N L P + L KL + +N N + P + NL++L LTL++NQ
Sbjct: 63 NNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQ 118
Query: 186 LSGKIP-KSIGALSKLQVFRAGGNQNLKGELPWEIGNCSNLVMLGLAETSISGNVP-SSI 243
++ P K++ L++L++ + N ++ G ++L L + ++ P +++
Sbjct: 119 ITDIDPLKNLTNLNRLEL-----SSNTISDISALSG-LTSLQQLNFSSNQVTDLKPLANL 172
Query: 244 GMLERIQTIAIYTSLLSGPIPEEIGNCSELQNLYLYQNSISGPIPGRIGALSKLKSLLLW 303
LER+ + S +S + + L++L N IS P +G L+ L L L
Sbjct: 173 TTLERLDISSNKVSDIS-----VLAKLTNLESLIATNNQISDITP--LGILTNLDELSLN 225
Query: 304 QNSL--VGAIPDELGSCTELTVVDFSDNLLTGSIPRSFGNLLKLQELQLSVNQLSGTIPI 361
N L +G L S T LT +D ++N ++ P S L KL EL+L NQ+S P
Sbjct: 226 GNQLKDIGT----LASLTNLTDLDLANNQISNLAPLS--GLTKLTELKLGANQISNISP- 278
Query: 362 EIATCTALTHLEIDNNAISGEIP-ADIGNINGLTLFFAWKNKLTGNIP-ESLSQCQELQA 419
+A TALT+LE++ N + P +++ N+ LTL+F N ++ P SL++ Q L
Sbjct: 279 -LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYF---NNISDISPVSSLTKLQRL-- 332
Query: 420 LDFSYNN 426
F YNN
Sbjct: 333 --FFYNN 337
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 98/230 (42%), Gaps = 37/230 (16%)
Query: 483 MGNLKHLNFVDMSENHLVGGIPPSVVGCQSLEFLDLHSNGLTGSVPDTLPTSLQLVDLSD 542
+ NL +LN +++S N + I ++ G SL+ L+ SN +T P T+L+ +D+S
Sbjct: 125 LKNLTNLNRLELSSNT-ISDIS-ALSGLTSLQQLNFSSNQVTDLKPLANLTTLERLDISS 182
Query: 543 NRLSGSLAHSIGSLTEXXXXXXXXNQLSGRIPAEIL--------------------SCRK 582
N++S + LT NQ+S P IL S
Sbjct: 183 NKVSD--ISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTN 240
Query: 583 LILLDIGNNRFSGEIPKELGQXXXXXXXXXXXXXQFSGEIPSEFSGLTKLGILDLSHNKL 642
L LD+ NN+ S P Q S P +GLT L L+L+ N+L
Sbjct: 241 LTDLDLANNQISNLAPLS---GLTKLTELKLGANQISNISP--LAGLTALTNLELNENQL 295
Query: 643 SGDLDALASLQNLVSLNVSFNDFSGELPNTP-------FFRKLPLSDLAS 685
D+ +++L+NL L + FN+ S P + FF +SD++S
Sbjct: 296 E-DISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSS 344
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 19/206 (9%)
Query: 774 IGTGSSGVVYRVT-IPNGETLAVKKMWSSDESGAFSS----EIQTLGSIRHKNIVRLLGW 828
+G G+ GVV++V+ P+G +A +K+ + A + E+Q L IV G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 829 GSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILH 888
+ + +++ GSL +L AG+ + +V + V L YL I+H
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREK--HKIMH 128
Query: 889 GDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQR 948
DVK N+L+ + L DFG VSG D+ + + G+ YM+PE
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANS-----FVGTRSYMSPERLQGTH 179
Query: 949 ITEKSDVYSFGVVLLEVLTGRHPLDP 974
+ +SD++S G+ L+E+ GR+P+ P
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 152/307 (49%), Gaps = 38/307 (12%)
Query: 126 RELTFIDLSGNSLWGEIPTEVCRLRKLESLYLNTNLLEGEIPSDIGNLSSLAYLTLYDNQ 185
LT I+ S N L P + L KL + +N N + P + NL++L LTL++NQ
Sbjct: 63 NNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQ 118
Query: 186 LSGKIP-KSIGALSKLQVFRAGGNQNLKGELPWEIGNCSNLVMLGLAETSISGNVP-SSI 243
++ P K++ L++L++ + N ++ G ++L L + ++ P +++
Sbjct: 119 ITDIDPLKNLTNLNRLEL-----SSNTISDISALSG-LTSLQQLSFSSNQVTDLKPLANL 172
Query: 244 GMLERIQTIAIYTSLLSGPIPEEIGNCSELQNLYLYQNSISGPIPGRIGALSKLKSLLLW 303
LER+ + S +S + + L++L N IS P +G L+ L L L
Sbjct: 173 TTLERLDISSNKVSDIS-----VLAKLTNLESLIATNNQISDITP--LGILTNLDELSLN 225
Query: 304 QNSL--VGAIPDELGSCTELTVVDFSDNLLTGSIPRSFGNLLKLQELQLSVNQLSGTIPI 361
N L +G L S T LT +D ++N ++ P S L KL EL+L NQ+S P
Sbjct: 226 GNQLKDIGT----LASLTNLTDLDLANNQISNLAPLS--GLTKLTELKLGANQISNISP- 278
Query: 362 EIATCTALTHLEIDNNAISGEIP-ADIGNINGLTLFFAWKNKLTGNIP-ESLSQCQELQA 419
+A TALT+LE++ N + P +++ N+ LTL+F N ++ P SL++ Q L
Sbjct: 279 -LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYF---NNISDISPVSSLTKLQRL-- 332
Query: 420 LDFSYNN 426
F YNN
Sbjct: 333 --FFYNN 337
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 97/230 (42%), Gaps = 37/230 (16%)
Query: 483 MGNLKHLNFVDMSENHLVGGIPPSVVGCQSLEFLDLHSNGLTGSVPDTLPTSLQLVDLSD 542
+ NL +LN +++S N + I ++ G SL+ L SN +T P T+L+ +D+S
Sbjct: 125 LKNLTNLNRLELSSNT-ISDIS-ALSGLTSLQQLSFSSNQVTDLKPLANLTTLERLDISS 182
Query: 543 NRLSGSLAHSIGSLTEXXXXXXXXNQLSGRIPAEIL--------------------SCRK 582
N++S + LT NQ+S P IL S
Sbjct: 183 NKVSD--ISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTN 240
Query: 583 LILLDIGNNRFSGEIPKELGQXXXXXXXXXXXXXQFSGEIPSEFSGLTKLGILDLSHNKL 642
L LD+ NN+ S P Q S P +GLT L L+L+ N+L
Sbjct: 241 LTDLDLANNQISNLAPLS---GLTKLTELKLGANQISNISP--LAGLTALTNLELNENQL 295
Query: 643 SGDLDALASLQNLVSLNVSFNDFSGELPNTP-------FFRKLPLSDLAS 685
D+ +++L+NL L + FN+ S P + FF +SD++S
Sbjct: 296 E-DISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSS 344
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 19/206 (9%)
Query: 774 IGTGSSGVVYRVT-IPNGETLAVKKMWSSDESGAFSS----EIQTLGSIRHKNIVRLLGW 828
+G G+ GVV++V+ P+G +A +K+ + A + E+Q L IV G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 829 GSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILH 888
+ + +++ GSL +L AG+ + +V + V L YL I+H
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREK--HKIMH 128
Query: 889 GDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQR 948
DVK N+L+ + L DFG VSG D+ + + G+ YM+PE
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANS-----FVGTRSYMSPERLQGTH 179
Query: 949 ITEKSDVYSFGVVLLEVLTGRHPLDP 974
+ +SD++S G+ L+E+ GR+P+ P
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 19/206 (9%)
Query: 774 IGTGSSGVVYRVT-IPNGETLAVKKMWSSDESGAFSS----EIQTLGSIRHKNIVRLLGW 828
+G G+ GVV++V+ P+G +A +K+ + A + E+Q L IV G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 829 GSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILH 888
+ + +++ GSL +L AG+ + +V + V L YL I+H
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREK--HKIMH 128
Query: 889 GDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQR 948
DVK N+L+ + L DFG VSG D+ + + G+ YM+PE
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANS-----FVGTRSYMSPERLQGTH 179
Query: 949 ITEKSDVYSFGVVLLEVLTGRHPLDP 974
+ +SD++S G+ L+E+ GR+P+ P
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 105/237 (44%), Gaps = 38/237 (16%)
Query: 752 TLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYRVTIPNG---ETLAVKKM---WSSDESG 805
T+Y LD++ ++ +VIG G+ G V + I A+K+M S D+
Sbjct: 7 TIYPVLDWN------DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHR 60
Query: 806 AFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGAD---- 860
F+ E++ L + H NI+ LLG ++ L +Y P+G+L L + D
Sbjct: 61 DFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFA 120
Query: 861 ----------WEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFG 910
+ VA + YL +H D+ A N+L+G Y A +ADFG
Sbjct: 121 IANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFG 177
Query: 911 LARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
L+R + KT R + +MA E + T SDV+S+GV+L E+++
Sbjct: 178 LSR----GQEVYVKKTMGRLPVR----WMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 19/206 (9%)
Query: 774 IGTGSSGVVYRVT-IPNGETLAVKKMWSSDESGAFSS----EIQTLGSIRHKNIVRLLGW 828
+G G+ GVV++V+ P+G +A +K+ + A + E+Q L IV G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 829 GSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILH 888
+ + +++ GSL +L AG+ + +V + V L YL I+H
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHK--IMH 128
Query: 889 GDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQR 948
DVK N+L+ + L DFG VSG D+ + + G+ YM+PE
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANS-----FVGTRSYMSPERLQGTH 179
Query: 949 ITEKSDVYSFGVVLLEVLTGRHPLDP 974
+ +SD++S G+ L+E+ GR+P+ P
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 105/237 (44%), Gaps = 38/237 (16%)
Query: 752 TLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYRVTIPNG---ETLAVKKM---WSSDESG 805
T+Y LD++ ++ +VIG G+ G V + I A+K+M S D+
Sbjct: 17 TIYPVLDWN------DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHR 70
Query: 806 AFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGAD---- 860
F+ E++ L + H NI+ LLG ++ L +Y P+G+L L + D
Sbjct: 71 DFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFA 130
Query: 861 ----------WEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFG 910
+ VA + YL +H D+ A N+L+G Y A +ADFG
Sbjct: 131 IANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFG 187
Query: 911 LARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
L+R + KT R + +MA E + T SDV+S+GV+L E+++
Sbjct: 188 LSR----GQEVYVKKTMGRLPVR----WMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 19/206 (9%)
Query: 774 IGTGSSGVVYRVT-IPNGETLAVKKMWSSDESGAFSS----EIQTLGSIRHKNIVRLLGW 828
+G G+ GVV++V+ P+G +A +K+ + A + E+Q L IV G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 829 GSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILH 888
+ + +++ GSL +L AG+ + +V + V L YL I+H
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREK--HKIMH 128
Query: 889 GDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQR 948
DVK N+L+ + L DFG VSG D+ + + G+ YM+PE
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANS-----FVGTRSYMSPERLQGTH 179
Query: 949 ITEKSDVYSFGVVLLEVLTGRHPLDP 974
+ +SD++S G+ L+E+ GR+P+ P
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 112/247 (45%), Gaps = 35/247 (14%)
Query: 769 TSANVIGTGSSGVVYRVTIPN-GETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLG 827
T VIG GS GVVY+ + + GE +A+KK+ + E+Q + + H NIVRL
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRLRY 80
Query: 828 W----GSNKNLKL--LFYDYLPNGSLSSLLHGAGKGGADWEARYE--VVLGVAHALAYLH 879
+ G K++ L DY+P H + + Y + + +LAY+H
Sbjct: 81 FFYSSGEKKDVVYLNLVLDYVPETVYRVARHYS-RAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAY-LADFGLAR-IVSGSGDDN--CSKTNQRPQLA-G 934
I H D+K N+LL P L DFG A+ +V G + + CS+ + P+L G
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 935 SYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLMLN 994
+ Y T DV+S G VL E+L G+ P PG + + Q ++ ++
Sbjct: 197 ATDY-----------TSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVEIIKVLGT 241
Query: 995 LEAEQTQ 1001
EQ +
Sbjct: 242 PTREQIR 248
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 18/187 (9%)
Query: 790 GETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSS 849
G+ + + + S EI S+ H+++V G+ + + + + SL
Sbjct: 47 GKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE 106
Query: 850 LLHGAGKGGADWEARY---EVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYL 906
L H K + EARY ++VLG YLH + ++H D+K N+ L + +
Sbjct: 107 L-HKRRKALTEPEARYYLRQIVLGCQ----YLHRN---RVIHRDLKLGNLFLNEDLEVKI 158
Query: 907 ADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVL 966
DFGLA V G+ ++ L G+ Y+APE S + + + DV+S G ++ +L
Sbjct: 159 GDFGLATKVEYDGE-------RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLL 211
Query: 967 TGRHPLD 973
G+ P +
Sbjct: 212 VGKPPFE 218
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 60/224 (26%), Positives = 97/224 (43%), Gaps = 24/224 (10%)
Query: 756 KLDFSIDDVVRNLTSANVIGTGSSGVVYRV-TIPNGETLAVKKMWSS--DESGA---FSS 809
K F+IDD +G G G VY N +A+K ++ S ++ G
Sbjct: 8 KRKFTIDD----FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRR 63
Query: 810 EIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVL 869
EI+ +RH NI+R+ + ++ L ++ P G L L G+ A + L
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL 123
Query: 870 GVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQR 929
A AL Y H ++H D+K N+L+G + +ADFG + + + +R
Sbjct: 124 --ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSV---------HAPSLRR 169
Query: 930 PQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLD 973
+ G+ Y+ PE + EK D++ GV+ E L G P D
Sbjct: 170 RXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 60/224 (26%), Positives = 97/224 (43%), Gaps = 24/224 (10%)
Query: 756 KLDFSIDDVVRNLTSANVIGTGSSGVVYRV-TIPNGETLAVKKMWSS--DESGA---FSS 809
K F+IDD +G G G VY N +A+K ++ S ++ G
Sbjct: 9 KRKFTIDD----FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRR 64
Query: 810 EIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVL 869
EI+ +RH NI+R+ + ++ L ++ P G L L G+ A + L
Sbjct: 65 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL 124
Query: 870 GVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQR 929
A AL Y H ++H D+K N+L+G + +ADFG + + + +R
Sbjct: 125 --ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSV---------HAPSLRR 170
Query: 930 PQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLD 973
+ G+ Y+ PE + EK D++ GV+ E L G P D
Sbjct: 171 RXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 18/187 (9%)
Query: 790 GETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSS 849
G+ + + + S EI S+ H+++V G+ + + + + SL
Sbjct: 47 GKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE 106
Query: 850 LLHGAGKGGADWEARY---EVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYL 906
L H K + EARY ++VLG YLH + ++H D+K N+ L + +
Sbjct: 107 L-HKRRKALTEPEARYYLRQIVLGCQ----YLHRN---RVIHRDLKLGNLFLNEDLEVKI 158
Query: 907 ADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVL 966
DFGLA V G+ ++ L G+ Y+APE S + + + DV+S G ++ +L
Sbjct: 159 GDFGLATKVEYDGE-------RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLL 211
Query: 967 TGRHPLD 973
G+ P +
Sbjct: 212 VGKPPFE 218
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 18/187 (9%)
Query: 790 GETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSS 849
G+ + + + S EI S+ H+++V G+ + + + + SL
Sbjct: 51 GKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE 110
Query: 850 LLHGAGKGGADWEARY---EVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYL 906
L H K + EARY ++VLG YLH + ++H D+K N+ L + +
Sbjct: 111 L-HKRRKALTEPEARYYLRQIVLGCQ----YLHRN---RVIHRDLKLGNLFLNEDLEVKI 162
Query: 907 ADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVL 966
DFGLA V G+ ++ L G+ Y+APE S + + + DV+S G ++ +L
Sbjct: 163 GDFGLATKVEYDGE-------RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLL 215
Query: 967 TGRHPLD 973
G+ P +
Sbjct: 216 VGKPPFE 222
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 23/218 (10%)
Query: 764 VVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAF-SSEIQTLGSIRHKNI 822
+ R + IG G G V+R GE +AVK S +E F +EI +RH+NI
Sbjct: 2 IARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI 60
Query: 823 VRLLGWGSNKNLKL----LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYL 878
+ + + N L DY +GSL L+ + E ++ L A LA+L
Sbjct: 61 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHL 117
Query: 879 HHDCM-----PPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
H + + P I H D+K+ N+L+ +AD GLA + D N R
Sbjct: 118 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR---V 174
Query: 934 GSYGYMAPE----HASMQRIT--EKSDVYSFGVVLLEV 965
G+ YMAPE +M+ +++D+Y+ G+V E+
Sbjct: 175 GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 23/218 (10%)
Query: 764 VVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAF-SSEIQTLGSIRHKNI 822
+ R + IG G G V+R GE +AVK S +E F +EI +RH+NI
Sbjct: 1 IARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI 59
Query: 823 VRLLGWGSNKNLKL----LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYL 878
+ + + N L DY +GSL L+ + E ++ L A LA+L
Sbjct: 60 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHL 116
Query: 879 HHDCM-----PPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
H + + P I H D+K+ N+L+ +AD GLA + D N R
Sbjct: 117 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR---V 173
Query: 934 GSYGYMAPE----HASMQRIT--EKSDVYSFGVVLLEV 965
G+ YMAPE +M+ +++D+Y+ G+V E+
Sbjct: 174 GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 23/218 (10%)
Query: 764 VVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAF-SSEIQTLGSIRHKNI 822
+ R + IG G G V+R GE +AVK S +E F +EI +RH+NI
Sbjct: 7 IARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI 65
Query: 823 VRLLGWGSNKNLKL----LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYL 878
+ + + N L DY +GSL L+ + E ++ L A LA+L
Sbjct: 66 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHL 122
Query: 879 HHDCM-----PPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
H + + P I H D+K+ N+L+ +AD GLA + D N R
Sbjct: 123 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR---V 179
Query: 934 GSYGYMAPE----HASMQRIT--EKSDVYSFGVVLLEV 965
G+ YMAPE +M+ +++D+Y+ G+V E+
Sbjct: 180 GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 23/218 (10%)
Query: 764 VVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAF-SSEIQTLGSIRHKNI 822
+ R + IG G G V+R GE +AVK S +E F +EI +RH+NI
Sbjct: 4 IARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI 62
Query: 823 VRLLGWGSNKNLKL----LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYL 878
+ + + N L DY +GSL L+ + E ++ L A LA+L
Sbjct: 63 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHL 119
Query: 879 HHDCM-----PPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
H + + P I H D+K+ N+L+ +AD GLA + D N R
Sbjct: 120 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR---V 176
Query: 934 GSYGYMAPE----HASMQRIT--EKSDVYSFGVVLLEV 965
G+ YMAPE +M+ +++D+Y+ G+V E+
Sbjct: 177 GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 24/230 (10%)
Query: 773 VIGTGSSGVVYRVTIPN-GETLAVKKMWSSDESGAFSS----EIQTLGSIRHKNIVRLLG 827
++G GS G+V + + G +A+KK SD+ EI+ L +RH+N+V LL
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH-HDCMPPI 886
K L ++++ + L L G D++ + + + + + + H H+ I
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDL--ELFPNGLDYQVVQKYLFQIINGIGFCHSHN----I 145
Query: 887 LHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPE-HAS 945
+H D+K N+L+ L DFG AR ++ G+ + R Y APE
Sbjct: 146 IHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATR-------WYRAPELLVG 198
Query: 946 MQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLMLNL 995
+ + DV++ G ++ E+ G +P PG + + Q +M + NL
Sbjct: 199 DVKYGKAVDVWAIGCLVTEMFMG----EPLFPGDSDIDQLYHIMMCLGNL 244
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 117/259 (45%), Gaps = 45/259 (17%)
Query: 741 NSFTADDTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYRVTIPN-GE-----TLA 794
NS+T D ++ +K +F + NL +G G+ G V T G+ +A
Sbjct: 10 NSYTFIDPTQLPYNEKWEFPRN----NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVA 65
Query: 795 VKKMWSS---DESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSL 850
VK + S+ DE A SE++ + + +H+NIV LLG ++ L+ +Y G L +
Sbjct: 66 VKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNF 125
Query: 851 LH-------------GAGKGGADWEARYEVVL--------GVAHALAYL-HHDCMPPILH 888
L G G D E + L VA +A+L +C +H
Sbjct: 126 LRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IH 181
Query: 889 GDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQR 948
DV A NVLL G+ A + DFGLAR + + K N R + +MAPE
Sbjct: 182 RDVAARNVLLTNGHVAKIGDFGLARDIMNDS-NYIVKGNARLPVK----WMAPESIFDCV 236
Query: 949 ITEKSDVYSFGVVLLEVLT 967
T +SDV+S+G++L E+ +
Sbjct: 237 YTVQSDVWSYGILLWEIFS 255
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 18/210 (8%)
Query: 772 NVIGTGSSGVVY--RVTIPNGETLAV-----KKMWSSDESGAFSSEIQTLGSIRHKNIVR 824
VIG G G V + +P + V K ++ + F SE +G H N++
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 825 LLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
L G + ++ +++ NGSL S L G ++ G+A + YL
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLR-QNDGQFTVIQLVGMLRGIAAGMKYLAD---M 128
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGS--YGYMAPE 942
+H + A N+L+ ++DFGL+R + +D+ S L G + APE
Sbjct: 129 NYVHRALAARNILVNSNLVCKVSDFGLSRFL----EDDTSDPTYTSALGGKIPIRWTAPE 184
Query: 943 HASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
++ T SDV+S+G+V+ EV++ G P
Sbjct: 185 AIQYRKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 114/252 (45%), Gaps = 38/252 (15%)
Query: 741 NSFTADDTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYRVTIPN-GE-----TLA 794
NS+T D ++ +K +F + NL +G G+ G V T G+ +A
Sbjct: 25 NSYTFIDPTQLPYNEKWEFPRN----NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVA 80
Query: 795 VKKMWSS---DESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSL 850
VK + S+ DE A SE++ + + +H+NIV LLG ++ L+ +Y G L +
Sbjct: 81 VKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNF 140
Query: 851 LHGAGKGGADWEAR--------------YEVVLGVAHALAYL-HHDCMPPILHGDVKAMN 895
L G ++ VA +A+L +C +H DV A N
Sbjct: 141 LRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNC----IHRDVAARN 196
Query: 896 VLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDV 955
VLL G+ A + DFGLAR + + K N R + +MAPE T +SDV
Sbjct: 197 VLLTNGHVAKIGDFGLARDIMNDS-NYIVKGNARLPVK----WMAPESIFDCVYTVQSDV 251
Query: 956 YSFGVVLLEVLT 967
+S+G++L E+ +
Sbjct: 252 WSYGILLWEIFS 263
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 24/213 (11%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMW---SSDESGAFSSEIQTLGSIRHKNIVRLLGWGS 830
+G G+ G VY+ LA K+ S +E + EI L S H NIV+LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 831 NKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLG-VAHALAYLHHDCMPPILHG 889
+N + ++ G++ +++ + E++ +VV AL YLH + I+H
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLT--ESQIQVVCKQTLDALNYLHDN---KIIHR 159
Query: 890 DVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPE----HAS 945
D+KA N+L LADFG++ N +R G+ +MAPE S
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSA-------KNTRXIQRRDSFIGTPYWMAPEVVMCETS 212
Query: 946 MQRITE-KSDVYSFGVVLLEVLT---GRHPLDP 974
R + K+DV+S G+ L+E+ H L+P
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPPHHELNP 245
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 18/187 (9%)
Query: 790 GETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSS 849
G+ + + + S EI S+ H+++V G+ + + + + SL
Sbjct: 71 GKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE 130
Query: 850 LLHGAGKGGADWEARY---EVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYL 906
L H K + EARY ++VLG YLH + ++H D+K N+ L + +
Sbjct: 131 L-HKRRKALTEPEARYYLRQIVLGCQ----YLHRN---RVIHRDLKLGNLFLNEDLEVKI 182
Query: 907 ADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVL 966
DFGLA V G+ ++ L G+ Y+APE S + + + DV+S G ++ +L
Sbjct: 183 GDFGLATKVEYDGE-------RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLL 235
Query: 967 TGRHPLD 973
G+ P +
Sbjct: 236 VGKPPFE 242
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 19/206 (9%)
Query: 774 IGTGSSGVVYRVT-IPNGETLAVKKMWSSDESGAFSS----EIQTLGSIRHKNIVRLLGW 828
+G G+ GVV +V P+G +A +K+ + A + E+Q L IV G
Sbjct: 24 LGAGNGGVVTKVQHRPSGLIMA-RKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 82
Query: 829 GSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILH 888
+ + +++ GSL +L A + E +V + V LAYL I+H
Sbjct: 83 FYSDGEISICMEHMDGGSLDQVLKEAKR--IPEEILGKVSIAVLRGLAYLREKHQ--IMH 138
Query: 889 GDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQR 948
DVK N+L+ + L DFG VSG D+ + + G+ YMAPE
Sbjct: 139 RDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANS-----FVGTRSYMAPERLQGTH 189
Query: 949 ITEKSDVYSFGVVLLEVLTGRHPLDP 974
+ +SD++S G+ L+E+ GR+P+ P
Sbjct: 190 YSVQSDIWSMGLSLVELAVGRYPIPP 215
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 24/213 (11%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMW---SSDESGAFSSEIQTLGSIRHKNIVRLLGWGS 830
+G G+ G VY+ LA K+ S +E + EI L S H NIV+LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 831 NKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLG-VAHALAYLHHDCMPPILHG 889
+N + ++ G++ +++ + E++ +VV AL YLH + I+H
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLT--ESQIQVVCKQTLDALNYLHDN---KIIHR 159
Query: 890 DVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPE----HAS 945
D+KA N+L LADFG++ N +R G+ +MAPE S
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSA-------KNTRXIQRRDXFIGTPYWMAPEVVMCETS 212
Query: 946 MQRITE-KSDVYSFGVVLLEVLT---GRHPLDP 974
R + K+DV+S G+ L+E+ H L+P
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPPHHELNP 245
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 24/213 (11%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMW---SSDESGAFSSEIQTLGSIRHKNIVRLLGWGS 830
+G G+ G VY+ LA K+ S +E + EI L S H NIV+LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 831 NKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLG-VAHALAYLHHDCMPPILHG 889
+N + ++ G++ +++ + E++ +VV AL YLH + I+H
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLT--ESQIQVVCKQTLDALNYLHDN---KIIHR 159
Query: 890 DVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPE----HAS 945
D+KA N+L LADFG++ N +R G+ +MAPE S
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSA-------KNTRTIQRRDSFIGTPYWMAPEVVMCETS 212
Query: 946 MQRITE-KSDVYSFGVVLLEVLT---GRHPLDP 974
R + K+DV+S G+ L+E+ H L+P
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPPHHELNP 245
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 27/220 (12%)
Query: 764 VVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAF-SSEIQTLGSIRHKNI 822
+ + + IG G G V+ + GE +AVK ++++E+ F +EI +RH+NI
Sbjct: 35 IAKQIQMVKQIGKGRYGEVW-MGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENI 93
Query: 823 VRLL-----GWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAY 877
+ + G GS L L+ DY NGSL L D ++ ++ L +
Sbjct: 94 LGFIAADIKGTGSWTQLYLIT-DYHENGSLYDYLKSTT---LDAKSMLKLAYSSVSGLCH 149
Query: 878 LHHDCM-----PPILHGDVKAMNVLLGPGYQAYLADFGLA-RIVSGSGDDNCSKTNQRPQ 931
LH + P I H D+K+ N+L+ +AD GLA + +S + + + +
Sbjct: 150 LHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTR--- 206
Query: 932 LAGSYGYMAPE--HASMQRITEKS----DVYSFGVVLLEV 965
G+ YM PE S+ R +S D+YSFG++L EV
Sbjct: 207 -VGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 117/250 (46%), Gaps = 36/250 (14%)
Query: 741 NSFTADDTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYRVTIPN-GE-----TLA 794
NS+T D ++ +K +F + NL +G G+ G V T G+ +A
Sbjct: 25 NSYTFIDPTQLPYNEKWEFPRN----NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVA 80
Query: 795 VKKMWSS---DESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSL 850
VK + S+ DE A SE++ + + +H+NIV LLG ++ L+ +Y G L +
Sbjct: 81 VKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNF 140
Query: 851 LHGAGK--------GGADWEARYEVVLG----VAHALAYL-HHDCMPPILHGDVKAMNVL 897
L + A+ A +L VA +A+L +C +H DV A NVL
Sbjct: 141 LRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVL 196
Query: 898 LGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYS 957
L G+ A + DFGLAR + + K N R + +MAPE T +SDV+S
Sbjct: 197 LTNGHVAKIGDFGLARDIMNDS-NYIVKGNARLPVK----WMAPESIFDCVYTVQSDVWS 251
Query: 958 FGVVLLEVLT 967
+G++L E+ +
Sbjct: 252 YGILLWEIFS 261
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide
Length = 350
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 115/248 (46%), Gaps = 37/248 (14%)
Query: 769 TSANVIGTGSSGVVYRVTIPN-GETLAVKKMWSSDESGAFSS-EIQTLGSIRHKNIVRLL 826
T VIG GS GVVY+ + + GE +A+KK+ + AF + E+Q + + H NIVRL
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL---QGKAFKNRELQIMRKLDHCNIVRLR 79
Query: 827 GW----GSNKNLKLL--FYDYLPNGSLSSLLHGAGKGGADWEARYE--VVLGVAHALAYL 878
+ G K+ L DY+P ++ + + Y + + +LAY+
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVP-ATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 879 HHDCMPPILHGDVKAMNVLLGPGYQAY-LADFGLAR-IVSGSGDDN--CSKTNQRPQLA- 933
H I H D+K N+LL P L DFG A+ +V G + + CS+ + P+L
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 195
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLML 993
G+ Y T DV+S G VL E+L G+ P PG + + Q ++ ++
Sbjct: 196 GATDY-----------TSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVEIIKVLG 240
Query: 994 NLEAEQTQ 1001
EQ +
Sbjct: 241 TPTREQIR 248
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 66/223 (29%), Positives = 101/223 (45%), Gaps = 36/223 (16%)
Query: 771 ANVIGTGSSGVV----YRVTIPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKN 821
+ +G G+ G V +++T G +AVK K+ S D G EIQ L RH +
Sbjct: 16 GDTLGVGTFGKVKIGEHQLT---GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 822 IVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHD 881
I++L S + +Y+ G L + G+ + EAR + + A+ Y H
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRV-EEMEAR-RLFQQILSAVDYCHRH 130
Query: 882 CMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGD---DNCSKTN-QRPQLAGSYG 937
++H D+K NVLL A +ADFGL+ ++S G+ D+C N P++
Sbjct: 131 M---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRDSCGSPNYAAPEVISGRL 186
Query: 938 YMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLD----PTL 976
Y PE D++S GV+L +L G P D PTL
Sbjct: 187 YAGPE----------VDIWSCGVILYALLCGTLPFDDEHVPTL 219
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 19/206 (9%)
Query: 774 IGTGSSGVVYRVT-IPNGETLAVKKMWSSDESGAFSS----EIQTLGSIRHKNIVRLLGW 828
+G G+ GVV++V+ P+G +A +K+ + A + E+Q L IV G
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 75
Query: 829 GSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILH 888
+ + +++ GSL +L AG+ + +V + V L YL I+H
Sbjct: 76 FYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREK--HKIMH 131
Query: 889 GDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQR 948
DVK N+L+ + L DFG VSG D + + G+ YM+PE
Sbjct: 132 RDVKPSNILVNSRGEIKLCDFG----VSGQLIDEMAN-----EFVGTRSYMSPERLQGTH 182
Query: 949 ITEKSDVYSFGVVLLEVLTGRHPLDP 974
+ +SD++S G+ L+E+ GR+P P
Sbjct: 183 YSVQSDIWSMGLSLVEMAVGRYPRPP 208
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 115/250 (46%), Gaps = 37/250 (14%)
Query: 767 NLTSANVIGTGSSGVVYRVTIPN-GETLAVKKMWSSDESGAFSS-EIQTLGSIRHKNIVR 824
+ T VIG GS GVVY+ + + GE +A+KK+ + AF + E+Q + + H NIVR
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL---QGKAFKNRELQIMRKLDHCNIVR 77
Query: 825 LLGW----GSNKNLKL--LFYDYLPNGSLSSLLHGAGKGGADWEARYE--VVLGVAHALA 876
L + G K+ L DY+P H + + Y + + +LA
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQTLPVIYVKLYMYQLFRSLA 136
Query: 877 YLHHDCMPPILHGDVKAMNVLLGPGYQAY-LADFGLAR-IVSGSGDDN--CSKTNQRPQL 932
Y+H I H D+K N+LL P L DFG A+ +V G + + CS+ + P+L
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 193
Query: 933 A-GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFL 991
G+ Y T DV+S G VL E+L G+ P PG + + Q ++ +
Sbjct: 194 IFGATDY-----------TSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVEIIKV 238
Query: 992 MLNLEAEQTQ 1001
+ EQ +
Sbjct: 239 LGTPTREQIR 248
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 115/250 (46%), Gaps = 37/250 (14%)
Query: 767 NLTSANVIGTGSSGVVYRVTIPN-GETLAVKKMWSSDESGAFSS-EIQTLGSIRHKNIVR 824
+ T VIG GS GVVY+ + + GE +A+KK+ + AF + E+Q + + H NIVR
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL---QGKAFKNRELQIMRKLDHCNIVR 77
Query: 825 LLGW----GSNKNLKL--LFYDYLPNGSLSSLLHGAGKGGADWEARYE--VVLGVAHALA 876
L + G K+ L DY+P H + + Y + + +LA
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQTLPVIYVKLYMYQLFRSLA 136
Query: 877 YLHHDCMPPILHGDVKAMNVLLGPGYQAY-LADFGLAR-IVSGSGDDN--CSKTNQRPQL 932
Y+H I H D+K N+LL P L DFG A+ +V G + + CS+ + P+L
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 193
Query: 933 A-GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFL 991
G+ Y T DV+S G VL E+L G+ P PG + + Q ++ +
Sbjct: 194 IFGATDY-----------TSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVEIIKV 238
Query: 992 MLNLEAEQTQ 1001
+ EQ +
Sbjct: 239 LGTPTREQIR 248
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 106/227 (46%), Gaps = 22/227 (9%)
Query: 751 MTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYRVT-IPNGETLAVKKMWSSDESGAFSS 809
+T QK+ DD ++ +G G+ GVV++V+ P+G +A +K+ + A +
Sbjct: 13 LTQKQKVGELKDDDFEKISE---LGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIRN 68
Query: 810 ----EIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARY 865
E+Q L IV G + + +++ GSL +L AG+ +
Sbjct: 69 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILG 126
Query: 866 EVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSK 925
+V + V L YL I+H DVK N+L+ + L DFG VSG D+ +
Sbjct: 127 KVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMAN 180
Query: 926 TNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
+ G+ YM+PE + +SD++S G+ L+E+ GR+P+
Sbjct: 181 S-----FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 222
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 111/247 (44%), Gaps = 35/247 (14%)
Query: 769 TSANVIGTGSSGVVYRVTIPN-GETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLG 827
T VIG GS GVVY+ + + GE +A+KK+ + E+Q + + H NIVRL
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRLRY 80
Query: 828 W----GSNKNLKL--LFYDYLPNGSLSSLLHGAGKGGADWEARYE--VVLGVAHALAYLH 879
+ G K+ L DY+P H + + Y + + +LAY+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAY-LADFGLAR-IVSGSGDDN--CSKTNQRPQLA-G 934
I H D+K N+LL P L DFG A+ +V G + + CS+ + P+L G
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 935 SYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLMLN 994
+ Y T DV+S G VL E+L G+ P PG + + Q ++ ++
Sbjct: 197 ATDY-----------TSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVEIIKVLGT 241
Query: 995 LEAEQTQ 1001
EQ +
Sbjct: 242 PTREQIR 248
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide
Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide
Peptide
Length = 378
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 111/247 (44%), Gaps = 35/247 (14%)
Query: 769 TSANVIGTGSSGVVYRVTIPN-GETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLG 827
T VIG GS GVVY+ + + GE +A+KK+ + E+Q + + H NIVRL
Sbjct: 42 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRLRY 99
Query: 828 W----GSNKNLKL--LFYDYLPNGSLSSLLHGAGKGGADWEARYE--VVLGVAHALAYLH 879
+ G K+ L DY+P H + + Y + + +LAY+H
Sbjct: 100 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQTLPVIYVKLYMYQLFRSLAYIH 158
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAY-LADFGLAR-IVSGSGDDN--CSKTNQRPQLA-G 934
I H D+K N+LL P L DFG A+ +V G + + CS+ + P+L G
Sbjct: 159 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 215
Query: 935 SYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLMLN 994
+ Y T DV+S G VL E+L G+ P PG + + Q ++ ++
Sbjct: 216 ATDY-----------TSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVEIIKVLGT 260
Query: 995 LEAEQTQ 1001
EQ +
Sbjct: 261 PTREQIR 267
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide
And Leucettine L4
Length = 350
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 111/247 (44%), Gaps = 35/247 (14%)
Query: 769 TSANVIGTGSSGVVYRVTIPN-GETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLG 827
T VIG GS GVVY+ + + GE +A+KK+ + E+Q + + H NIVRL
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRLRY 80
Query: 828 W----GSNKNLKL--LFYDYLPNGSLSSLLHGAGKGGADWEARYE--VVLGVAHALAYLH 879
+ G K+ L DY+P H + + Y + + +LAY+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAY-LADFGLAR-IVSGSGDDN--CSKTNQRPQLA-G 934
I H D+K N+LL P L DFG A+ +V G + + CS+ + P+L G
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 196
Query: 935 SYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLMLN 994
+ Y T DV+S G VL E+L G+ P PG + + Q ++ ++
Sbjct: 197 ATDY-----------TSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVEIIKVLGT 241
Query: 995 LEAEQTQ 1001
EQ +
Sbjct: 242 PTREQIR 248
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta
In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta
In Complex With An Inhibitor
Length = 350
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 111/247 (44%), Gaps = 35/247 (14%)
Query: 769 TSANVIGTGSSGVVYRVTIPN-GETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLG 827
T VIG GS GVVY+ + + GE +A+KK+ + E+Q + + H NIVRL
Sbjct: 24 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRLRY 81
Query: 828 W----GSNKNLKL--LFYDYLPNGSLSSLLHGAGKGGADWEARYE--VVLGVAHALAYLH 879
+ G K+ L DY+P H + + Y + + +LAY+H
Sbjct: 82 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQTLPVIYVKLYMYQLFRSLAYIH 140
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAY-LADFGLAR-IVSGSGDDN--CSKTNQRPQLA-G 934
I H D+K N+LL P L DFG A+ +V G + + CS+ + P+L G
Sbjct: 141 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 197
Query: 935 SYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLMLN 994
+ Y T DV+S G VL E+L G+ P PG + + Q ++ ++
Sbjct: 198 ATDY-----------TSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVEIIKVLGT 242
Query: 995 LEAEQTQ 1001
EQ +
Sbjct: 243 PTREQIR 249
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide
And Inhibitor 7d
Length = 350
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 111/247 (44%), Gaps = 35/247 (14%)
Query: 769 TSANVIGTGSSGVVYRVTIPN-GETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLG 827
T VIG GS GVVY+ + + GE +A+KK+ + E+Q + + H NIVRL
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRLRY 80
Query: 828 W----GSNKNLKL--LFYDYLPNGSLSSLLHGAGKGGADWEARYE--VVLGVAHALAYLH 879
+ G K+ L DY+P H + + Y + + +LAY+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAY-LADFGLAR-IVSGSGDDN--CSKTNQRPQLA-G 934
I H D+K N+LL P L DFG A+ +V G + + CS+ + P+L G
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 935 SYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLMLN 994
+ Y T DV+S G VL E+L G+ P PG + + Q ++ ++
Sbjct: 197 ATDY-----------TSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVEIIKVLGT 241
Query: 995 LEAEQTQ 1001
EQ +
Sbjct: 242 PTREQIR 248
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 63.5 bits (153), Expect = 6e-10, Method: Composition-based stats.
Identities = 67/220 (30%), Positives = 102/220 (46%), Gaps = 30/220 (13%)
Query: 771 ANVIGTGSSGVV----YRVTIPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKN 821
+ +G G+ G V +++T G +AVK K+ S D G EIQ L RH +
Sbjct: 16 GDTLGVGTFGKVKIGEHQLT---GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 822 IVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHD 881
I++L S + +Y+ G L + G+ + EAR + + A+ Y H
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRV-EEMEAR-RLFQQILSAVDYCHRH 130
Query: 882 CMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAP 941
++H D+K NVLL A +ADFGL+ ++S D +T+ GS Y AP
Sbjct: 131 M---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS---DGEFLRTS-----CGSPNYAAP 179
Query: 942 EHASMQRIT-EKSDVYSFGVVLLEVLTGRHPLD----PTL 976
E S + + D++S GV+L +L G P D PTL
Sbjct: 180 EVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTL 219
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 96/201 (47%), Gaps = 16/201 (7%)
Query: 774 IGTGSSGVVYRVTI-PNGETLAVKKM--WSSDESGAFSSEIQTLGSIRHKNIVRLLGWGS 830
IG GS+G+V T+ +G+ +AVKKM +E+ + +H+N+V +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 831 NKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGD 890
+ + ++L G+L+ ++ A V L V AL+ LH ++H D
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLHAQG---VIHRD 272
Query: 891 VKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRIT 950
+K+ ++LL + L+DFG VS + +R L G+ +MAPE S
Sbjct: 273 IKSDSILLTHDGRVKLSDFGFCAQVS-------KEVPRRKXLVGTPYWMAPELISRLPYG 325
Query: 951 EKSDVYSFGVVLLEVLTGRHP 971
+ D++S G++++E++ G P
Sbjct: 326 PEVDIWSLGIMVIEMVDGEPP 346
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 111/247 (44%), Gaps = 35/247 (14%)
Query: 769 TSANVIGTGSSGVVYRVTIPN-GETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLG 827
T VIG GS GVVY+ + + GE +A+KK+ + E+Q + + H NIVRL
Sbjct: 31 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRLRY 88
Query: 828 W----GSNKNLKL--LFYDYLPNGSLSSLLHGAGKGGADWEARYE--VVLGVAHALAYLH 879
+ G K+ L DY+P H + + Y + + +LAY+H
Sbjct: 89 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQTLPVIYVKLYMYQLFRSLAYIH 147
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAY-LADFGLAR-IVSGSGDDN--CSKTNQRPQLA-G 934
I H D+K N+LL P L DFG A+ +V G + + CS+ + P+L G
Sbjct: 148 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 204
Query: 935 SYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLMLN 994
+ Y T DV+S G VL E+L G+ P PG + + Q ++ ++
Sbjct: 205 ATDY-----------TSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVEIIKVLGT 249
Query: 995 LEAEQTQ 1001
EQ +
Sbjct: 250 PTREQIR 256
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 63.5 bits (153), Expect = 6e-10, Method: Composition-based stats.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 28/213 (13%)
Query: 773 VIGTGSSGVVY--RVTIPNGETLAV-----KKMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
VIG G G V R+ +P +AV K ++ + F E +G H N+V L
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL 109
Query: 826 LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVL------GVAHALAYLH 879
G + ++ +++ NG+L + L + ++ V+ G+A + YL
Sbjct: 110 EGVVTRGKPVMIVIEFMENGALDAFLR-------KHDGQFTVIQLVGMLRGIAAGMRYLA 162
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+H D+ A N+L+ ++DFGL+R++ + + T + + +
Sbjct: 163 D---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVR----WT 215
Query: 940 APEHASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
APE ++ T SDV+S+G+V+ EV++ G P
Sbjct: 216 APEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 111/247 (44%), Gaps = 35/247 (14%)
Query: 769 TSANVIGTGSSGVVYRVTIPN-GETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLG 827
T VIG GS GVVY+ + + GE +A+KK+ + E+Q + + H NIVRL
Sbjct: 36 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRLRY 93
Query: 828 W----GSNKNLKL--LFYDYLPNGSLSSLLHGAGKGGADWEARYE--VVLGVAHALAYLH 879
+ G K+ L DY+P H + + Y + + +LAY+H
Sbjct: 94 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQTLPVIYVKLYMYQLFRSLAYIH 152
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAY-LADFGLAR-IVSGSGDDN--CSKTNQRPQLA-G 934
I H D+K N+LL P L DFG A+ +V G + + CS+ + P+L G
Sbjct: 153 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 209
Query: 935 SYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLMLN 994
+ Y T DV+S G VL E+L G+ P PG + + Q ++ ++
Sbjct: 210 ATDY-----------TSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVEIIKVLGT 254
Query: 995 LEAEQTQ 1001
EQ +
Sbjct: 255 PTREQIR 261
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 147/311 (47%), Gaps = 47/311 (15%)
Query: 126 RELTFIDLSGNSLWGEIPTEVCRLRKLESLYLNTNLLEGEIPSDIGNLSSLAYLTLYDNQ 185
LT I+ S N L P + L KL + +N N + P + NL++L LTL++NQ
Sbjct: 68 NNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQ 123
Query: 186 LSGKIP-KSIGALSKLQVFRAGGNQNLKGELPWEIGNCSNLVMLGLAETSISGNVP---- 240
++ P K++ L++L+ L +I S L L + S V
Sbjct: 124 ITDIDPLKNLTNLNRLE---------LSSNTISDISALSGLT--SLQQLSFGNQVTDLKP 172
Query: 241 -SSIGMLERIQTIAIYTSLLSGPIPEEIGNCSELQNLYLYQNSISGPIPGRIGALSKLKS 299
+++ LER+ + S +S + + L++L N IS P +G L+ L
Sbjct: 173 LANLTTLERLDISSNKVSDIS-----VLAKLTNLESLIATNNQISDITP--LGILTNLDE 225
Query: 300 LLLWQNSL--VGAIPDELGSCTELTVVDFSDNLLTGSIPRSFGNLLKLQELQLSVNQLSG 357
L L N L +G L S T LT +D ++N ++ P S L KL EL+L NQ+S
Sbjct: 226 LSLNGNQLKDIGT----LASLTNLTDLDLANNQISNLAPLS--GLTKLTELKLGANQISN 279
Query: 358 TIPIEIATCTALTHLEIDNNAISGEIP-ADIGNINGLTLFFAWKNKLTGNIP-ESLSQCQ 415
P +A TALT+LE++ N + P +++ N+ LTL+F N ++ P SL++ Q
Sbjct: 280 ISP--LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYF---NNISDISPVSSLTKLQ 334
Query: 416 ELQALDFSYNN 426
L F YNN
Sbjct: 335 RL----FFYNN 341
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 141/352 (40%), Gaps = 84/352 (23%)
Query: 345 LQELQLSVNQLSGTIPIEIATCTALTHLEIDNNAISGEIP-ADIGNINGLTLFFAWKNKL 403
L ++ S NQL+ P++ T L + ++NN I+ P A++ N+ GLTLF N++
Sbjct: 70 LTQINFSNNQLTDITPLK--NLTKLVDILMNNNQIADITPLANLTNLTGLTLF---NNQI 124
Query: 404 TGNIPESLSQCQELQALDFSYNNLSGPIPKEIFGXXXXXXXXXXXXXXXGFIPPDIGNCT 463
T P L L L+ S N +S DI +
Sbjct: 125 TDIDP--LKNLTNLNRLELSSNTIS-----------------------------DISALS 153
Query: 464 TXXXXXXXXXXXSGTIPSEMGNLKHLNFVDMSENHLVGGIPPSVVG-CQSLEFLDLHSNG 522
T + NL L +D+S N V I SV+ +LE L +N
Sbjct: 154 GLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNK-VSDI--SVLAKLTNLESLIATNNQ 210
Query: 523 LTGSVPDTLPTSLQLVDLSDNRLS--GSLAHSIGSLTEXXXXXXXXNQLSGRIPAEILSC 580
++ P + T+L + L+ N+L G+LA SLT NQ+S P L+
Sbjct: 211 ISDITPLGILTNLDELSLNGNQLKDIGTLA----SLTNLTDLDLANNQISNLAPLSGLT- 265
Query: 581 RKLILLDIGNNRFSGEIPKELGQXXXXXXXXXXXXXQFSGEIPSEFSGLTKLGILDLSHN 640
KL L +G N+ S P +GLT L L+L+ N
Sbjct: 266 -KLTELKLGANQISNISP---------------------------LAGLTALTNLELNEN 297
Query: 641 KLSGDLDALASLQNLVSLNVSFNDFSGELPNTP-------FFRKLPLSDLAS 685
+L D+ +++L+NL L + FN+ S P + FF +SD++S
Sbjct: 298 QLE-DISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSS 348
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 767 NLTSANVIGTGSSGVVYRVTIPN-GETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
+ T VIG GS GVVY+ + + GE +A+KK+ + E+Q + + H NIVRL
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRL 90
Query: 826 LGW----GSNKNLKL--LFYDYLPNGSLSSLLHGAGKGGADWEARYE--VVLGVAHALAY 877
+ G K+ L DY+P H + + Y + + +LAY
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 878 LHHDCMPPILHGDVKAMNVLLGPGYQAY-LADFGLAR-IVSGSGDDN--CSKTNQRPQLA 933
+H I H D+K N+LL P L DFG A+ +V G + + CS+ + P+L
Sbjct: 150 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 206
Query: 934 -GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLM 992
G+ Y T DV+S G VL E+L G+ P PG + + Q ++ ++
Sbjct: 207 FGATDY-----------TSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVEIIKVL 251
Query: 993 LNLEAEQTQ 1001
EQ +
Sbjct: 252 GTPTREQIR 260
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 111/247 (44%), Gaps = 35/247 (14%)
Query: 769 TSANVIGTGSSGVVYRVTIPN-GETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLG 827
T VIG GS GVVY+ + + GE +A+KK+ + E+Q + + H NIVRL
Sbjct: 27 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRLRY 84
Query: 828 W----GSNKNLKL--LFYDYLPNGSLSSLLHGAGKGGADWEARYE--VVLGVAHALAYLH 879
+ G K+ L DY+P H + + Y + + +LAY+H
Sbjct: 85 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQTLPVIYVKLYMYQLFRSLAYIH 143
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAY-LADFGLAR-IVSGSGDDN--CSKTNQRPQLA-G 934
I H D+K N+LL P L DFG A+ +V G + + CS+ + P+L G
Sbjct: 144 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 200
Query: 935 SYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLMLN 994
+ Y T DV+S G VL E+L G+ P PG + + Q ++ ++
Sbjct: 201 ATDY-----------TSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVEIIKVLGT 245
Query: 995 LEAEQTQ 1001
EQ +
Sbjct: 246 PTREQIR 252
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 96/201 (47%), Gaps = 16/201 (7%)
Query: 774 IGTGSSGVVYRVTI-PNGETLAVKKM--WSSDESGAFSSEIQTLGSIRHKNIVRLLGWGS 830
IG GS+G+V T+ +G+ +AVKKM +E+ + +H+N+V +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 831 NKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGD 890
+ + ++L G+L+ ++ A V L V AL+ LH ++H D
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLHAQG---VIHRD 195
Query: 891 VKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRIT 950
+K+ ++LL + L+DFG VS + +R L G+ +MAPE S
Sbjct: 196 IKSDSILLTHDGRVKLSDFGFCAQVS-------KEVPRRKXLVGTPYWMAPELISRLPYG 248
Query: 951 EKSDVYSFGVVLLEVLTGRHP 971
+ D++S G++++E++ G P
Sbjct: 249 PEVDIWSLGIMVIEMVDGEPP 269
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 111/247 (44%), Gaps = 35/247 (14%)
Query: 769 TSANVIGTGSSGVVYRVTIPN-GETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLG 827
T VIG GS GVVY+ + + GE +A+KK+ + E+Q + + H NIVRL
Sbjct: 35 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRLRY 92
Query: 828 W----GSNKNLKL--LFYDYLPNGSLSSLLHGAGKGGADWEARYE--VVLGVAHALAYLH 879
+ G K+ L DY+P H + + Y + + +LAY+H
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAY-LADFGLAR-IVSGSGDDN--CSKTNQRPQLA-G 934
I H D+K N+LL P L DFG A+ +V G + + CS+ + P+L G
Sbjct: 152 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 208
Query: 935 SYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLMLN 994
+ Y T DV+S G VL E+L G+ P PG + + Q ++ ++
Sbjct: 209 ATDY-----------TSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVEIIKVLGT 253
Query: 995 LEAEQTQ 1001
EQ +
Sbjct: 254 PTREQIR 260
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 38/237 (16%)
Query: 752 TLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYRVTIPNG---ETLAVKKM---WSSDESG 805
T+Y LD++ ++ +VIG G+ G V + I A+K+M S D+
Sbjct: 14 TIYPVLDWN------DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHR 67
Query: 806 AFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGAD---- 860
F+ E++ L + H NI+ LLG ++ L +Y P+G+L L + D
Sbjct: 68 DFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFA 127
Query: 861 ----------WEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFG 910
+ VA + YL +H ++ A N+L+G Y A +ADFG
Sbjct: 128 IANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRNLAARNILVGENYVAKIADFG 184
Query: 911 LARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
L+R + KT R + +MA E + T SDV+S+GV+L E+++
Sbjct: 185 LSR----GQEVYVKKTMGRLPVR----WMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed
With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed
With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 767 NLTSANVIGTGSSGVVYRVTIPN-GETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
+ T VIG GS GVVY+ + + GE +A+KK+ + E+Q + + H NIVRL
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRL 106
Query: 826 LGW----GSNKNLKL--LFYDYLPNGSLSSLLHGAGKGGADWEARYE--VVLGVAHALAY 877
+ G K+ L DY+P H + + Y + + +LAY
Sbjct: 107 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQTLPVIYVKLYMYQLFRSLAY 165
Query: 878 LHHDCMPPILHGDVKAMNVLLGPGYQA-YLADFGLAR-IVSGSGDDN--CSKTNQRPQLA 933
+H I H D+K N+LL P L DFG A+ +V G + + CS+ + P+L
Sbjct: 166 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 222
Query: 934 -GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLM 992
G+ Y T DV+S G VL E+L G+ P PG + + Q ++ ++
Sbjct: 223 FGATDY-----------TSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVEIIKVL 267
Query: 993 LNLEAEQTQ 1001
EQ +
Sbjct: 268 GTPTREQIR 276
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 767 NLTSANVIGTGSSGVVYRVTIPN-GETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
+ T VIG GS GVVY+ + + GE +A+KK+ + E+Q + + H NIVRL
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRL 112
Query: 826 LGW----GSNKNLKL--LFYDYLPNGSLSSLLHGAGKGGADWEARYE--VVLGVAHALAY 877
+ G K+ L DY+P H + + Y + + +LAY
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 878 LHHDCMPPILHGDVKAMNVLLGPGYQA-YLADFGLAR-IVSGSGDDN--CSKTNQRPQLA 933
+H I H D+K N+LL P L DFG A+ +V G + + CS+ + P+L
Sbjct: 172 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 228
Query: 934 -GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLM 992
G+ Y T DV+S G VL E+L G+ P PG + + Q ++ ++
Sbjct: 229 FGATDY-----------TSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVEIIKVL 273
Query: 993 LNLEAEQTQ 1001
EQ +
Sbjct: 274 GTPTREQIR 282
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 63.2 bits (152), Expect = 8e-10, Method: Composition-based stats.
Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 24/213 (11%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMW---SSDESGAFSSEIQTLGSIRHKNIVRLLGWGS 830
+G G+ G VY+ LA K+ S +E + EI+ L + H IV+LLG
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 831 NKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVL-GVAHALAYLHHDCMPPILHG 889
+ + ++ P G++ +++ +G E + +VV + AL +LH I+H
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLT--EPQIQVVCRQMLEALNFLHSK---RIIHR 133
Query: 890 DVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRI 949
D+KA NVL+ LADFG++ N +R G+ +MAPE + +
Sbjct: 134 DLKAGNVLMTLEGDIRLADFGVSA-------KNLKTLQKRDSFIGTPYWMAPEVVMCETM 186
Query: 950 TE-----KSDVYSFGVVLLE---VLTGRHPLDP 974
+ K+D++S G+ L+E + H L+P
Sbjct: 187 KDTPYDYKADIWSLGITLIEMAQIEPPHHELNP 219
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 100/214 (46%), Gaps = 32/214 (14%)
Query: 772 NVIGTGSSGVVYRVTIPNGETLAVKKMWSSD-ESGAFSSEIQTLGSIRHKNIVRLLG--- 827
V G G V++ + N E +AVK D +S E+ +L ++H+NI++ +G
Sbjct: 30 EVKARGRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEK 88
Query: 828 WGSNKNLKL-LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDC---- 882
G++ ++ L L + GSLS L W + +A LAYLH D
Sbjct: 89 RGTSVDVDLWLITAFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLK 145
Query: 883 ---MPPILHGDVKAMNVLLGPGYQAYLADFGLA-RIVSG--SGDDNCSKTNQRPQLAGSY 936
P I H D+K+ NVLL A +ADFGLA + +G +GD + G+
Sbjct: 146 DGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQ--------VGTR 197
Query: 937 GYMAPE----HASMQRITE-KSDVYSFGVVLLEV 965
YMAPE + QR + D+Y+ G+VL E+
Sbjct: 198 RYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 63.2 bits (152), Expect = 8e-10, Method: Composition-based stats.
Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 24/213 (11%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMW---SSDESGAFSSEIQTLGSIRHKNIVRLLGWGS 830
+G G+ G VY+ LA K+ S +E + EI+ L + H IV+LLG
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 831 NKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVL-GVAHALAYLHHDCMPPILHG 889
+ + ++ P G++ +++ +G E + +VV + AL +LH I+H
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLT--EPQIQVVCRQMLEALNFLHSK---RIIHR 141
Query: 890 DVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRI 949
D+KA NVL+ LADFG++ N +R G+ +MAPE + +
Sbjct: 142 DLKAGNVLMTLEGDIRLADFGVSA-------KNLKTLQKRDSFIGTPYWMAPEVVMCETM 194
Query: 950 TE-----KSDVYSFGVVLLE---VLTGRHPLDP 974
+ K+D++S G+ L+E + H L+P
Sbjct: 195 KDTPYDYKADIWSLGITLIEMAQIEPPHHELNP 227
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 149/307 (48%), Gaps = 34/307 (11%)
Query: 126 RELTFIDLSGNSLWGEIPTEVCRLRKLESLYLNTNLLEGEIPSDIGNLSSLAYLTLYDNQ 185
LT I+ S N L P + L KL + +N N + P + NL++L LTL++NQ
Sbjct: 63 NNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQ 118
Query: 186 LSGKIP-KSIGALSKLQVFRAGGNQNLKGELPWEIGNCSNLVMLGLAETSISGNVPSSIG 244
++ P K++ L++L++ + N ++ G ++L L +++
Sbjct: 119 ITDIDPLKNLTNLNRLEL-----SSNTISDISALSG-LTSLQQLNFGNQVTDLKPLANLT 172
Query: 245 MLERIQTIAIYTSLLSGPIPEEIGNCSELQNLYLYQNSISGPIPGRIGALSKLKSLLLWQ 304
LER+ + S +S + + L++L N IS P +G L+ L L L
Sbjct: 173 TLERLDISSNKVSDIS-----VLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNG 225
Query: 305 NSL--VGAIPDELGSCTELTVVDFSDNLLTGSIPRSFGNLLKLQELQLSVNQLSGTIPIE 362
N L +G L S T LT +D ++N ++ P S L KL EL+L NQ+S P
Sbjct: 226 NQLKDIGT----LASLTNLTDLDLANNQISNLAPLS--GLTKLTELKLGANQISNISP-- 277
Query: 363 IATCTALTHLEIDNNAISGEIP-ADIGNINGLTLFFAWKNKLTGNIPESLSQCQELQALD 421
+A TALT+LE++ N + P +++ N+ LTL+F N ++ P +S +LQ L
Sbjct: 278 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYF---NNISDISP--VSSLTKLQRLF 332
Query: 422 FSYNNLS 428
FS N +S
Sbjct: 333 FSNNKVS 339
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 99/240 (41%), Gaps = 40/240 (16%)
Query: 483 MGNLKHLNFVDMSENHLVGGIPPSVVGCQSLEFLDLHSNGLTGSVPDTLPTSLQLVDLSD 542
+ NL +LN +++S N + I ++ G SL+ L+ N +T P T+L+ +D+S
Sbjct: 125 LKNLTNLNRLELSSNT-ISDIS-ALSGLTSLQQLNF-GNQVTDLKPLANLTTLERLDISS 181
Query: 543 NRLSGSLAHSIGSLTEXXXXXXXXNQLSGRIPAEIL--------------------SCRK 582
N++S + LT NQ+S P IL S
Sbjct: 182 NKVSD--ISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTN 239
Query: 583 LILLDIGNNRFSGEIPKELGQXXXXXXXXXXXXXQFSGEIPSEFSGLTKLGILDLSHNKL 642
L LD+ NN+ S P Q S P +GLT L L+L+ N+L
Sbjct: 240 LTDLDLANNQISNLAPLS---GLTKLTELKLGANQISNISP--LAGLTALTNLELNENQL 294
Query: 643 SGDLDALASLQNLVSLNVSFNDFSGELPNTPFFRKLPLSDLASNRGLYISGGVVSPTDSL 702
D+ +++L+NL L + FN+ S P+S L + L+ S VS SL
Sbjct: 295 E-DISPISNLKNLTYLTLYFNNISD---------ISPVSSLTKLQRLFFSNNKVSDVSSL 344
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 17/213 (7%)
Query: 763 DVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSI 817
+ + N IG G+ GVVY+ GE +A+KK+ E+ S EI L +
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 818 RHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAY 877
H NIV+LL +N L +++L + L + + G + + LA+
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 878 LHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYG 937
H +LH D+K N+L+ LADFGLAR G + T++ +
Sbjct: 126 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHE----VVTLW 175
Query: 938 YMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
Y APE + + D++S G + E++T R
Sbjct: 176 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4-
Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4-
Arylmaleimide Inhibitor
Length = 391
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 767 NLTSANVIGTGSSGVVYRVTIPN-GETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
+ T VIG GS GVVY+ + + GE +A+KK+ + E+Q + + H NIVRL
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRL 83
Query: 826 LGW----GSNKNLKL--LFYDYLPNGSLSSLLHGAGKGGADWEARYE--VVLGVAHALAY 877
+ G K+ L DY+P H + + Y + + +LAY
Sbjct: 84 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQTLPVIYVKLYMYQLFRSLAY 142
Query: 878 LHHDCMPPILHGDVKAMNVLLGPGYQAY-LADFGLAR-IVSGSGDDN--CSKTNQRPQLA 933
+H I H D+K N+LL P L DFG A+ +V G + + CS+ + P+L
Sbjct: 143 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 199
Query: 934 -GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLM 992
G+ Y T DV+S G VL E+L G+ P PG + + Q ++ ++
Sbjct: 200 FGATDY-----------TSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVEIIKVL 244
Query: 993 LNLEAEQTQ 1001
EQ +
Sbjct: 245 GTPTREQIR 253
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 148/312 (47%), Gaps = 44/312 (14%)
Query: 126 RELTFIDLSGNSLWGEIPTEVCRLRKLESLYLNTNLLEGEIPSDIGNLSSLAYLTLYDNQ 185
LT I+ S N L P + L KL + +N N + P + NL++L LTL++NQ
Sbjct: 67 NNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQ 122
Query: 186 LSGKIP-KSIGALSKLQVFRAGGNQNLKGELPWEIGNCSNLVMLGLAETSISGNVP---- 240
++ P K++ L++L+ L +I S L L + S V
Sbjct: 123 ITDIDPLKNLTNLNRLE---------LSSNTISDISALSGLT--SLQQLSFGNQVTDLKP 171
Query: 241 -SSIGMLERIQTIAIYTSLLSGPIPEEIGNCSELQNLYLYQNSISGPIPGRIGALSKLKS 299
+++ LER+ + S +S + + L++L N IS P +G L+ L
Sbjct: 172 LANLTTLERLDISSNKVSDIS-----VLAKLTNLESLIATNNQISDITP--LGILTNLDE 224
Query: 300 LLLWQNSL--VGAIPDELGSCTELTVVDFSDNLLTGSIPRSFGNLLKLQELQLSVNQLSG 357
L L N L +G L S T LT +D ++N ++ P S L KL EL+L NQ+S
Sbjct: 225 LSLNGNQLKDIGT----LASLTNLTDLDLANNQISNLAPLS--GLTKLTELKLGANQISN 278
Query: 358 TIPIEIATCTALTHLEIDNNAISGEIP-ADIGNINGLTLFFAWKNKLTGNIPESLSQCQE 416
P +A TALT+LE++ N + P +++ N+ LTL+F N ++ P +S +
Sbjct: 279 ISP--LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYF---NNISDISP--VSSLTK 331
Query: 417 LQALDFSYNNLS 428
LQ L F+ N +S
Sbjct: 332 LQRLFFANNKVS 343
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 141/352 (40%), Gaps = 84/352 (23%)
Query: 345 LQELQLSVNQLSGTIPIEIATCTALTHLEIDNNAISGEIP-ADIGNINGLTLFFAWKNKL 403
L ++ S NQL+ P++ T L + ++NN I+ P A++ N+ GLTLF N++
Sbjct: 69 LTQINFSNNQLTDITPLK--NLTKLVDILMNNNQIADITPLANLTNLTGLTLF---NNQI 123
Query: 404 TGNIPESLSQCQELQALDFSYNNLSGPIPKEIFGXXXXXXXXXXXXXXXGFIPPDIGNCT 463
T P L L L+ S N +S DI +
Sbjct: 124 TDIDP--LKNLTNLNRLELSSNTIS-----------------------------DISALS 152
Query: 464 TXXXXXXXXXXXSGTIPSEMGNLKHLNFVDMSENHLVGGIPPSVVG-CQSLEFLDLHSNG 522
T + NL L +D+S N V I SV+ +LE L +N
Sbjct: 153 GLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNK-VSDI--SVLAKLTNLESLIATNNQ 209
Query: 523 LTGSVPDTLPTSLQLVDLSDNRLS--GSLAHSIGSLTEXXXXXXXXNQLSGRIPAEILSC 580
++ P + T+L + L+ N+L G+LA SLT NQ+S P L+
Sbjct: 210 ISDITPLGILTNLDELSLNGNQLKDIGTLA----SLTNLTDLDLANNQISNLAPLSGLT- 264
Query: 581 RKLILLDIGNNRFSGEIPKELGQXXXXXXXXXXXXXQFSGEIPSEFSGLTKLGILDLSHN 640
KL L +G N+ S P +GLT L L+L+ N
Sbjct: 265 -KLTELKLGANQISNISP---------------------------LAGLTALTNLELNEN 296
Query: 641 KLSGDLDALASLQNLVSLNVSFNDFSGELPNTP-------FFRKLPLSDLAS 685
+L D+ +++L+NL L + FN+ S P + FF +SD++S
Sbjct: 297 QLE-DISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFANNKVSDVSS 347
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 17/213 (7%)
Query: 763 DVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSI 817
+ + N IG G+ GVVY+ GE +A+KK+ E+ S EI L +
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 818 RHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAY 877
H NIV+LL +N L +++L + L + + G + + LA+
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 878 LHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYG 937
H +LH D+K N+L+ LADFGLAR G + T++ +
Sbjct: 126 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHE----VVTLW 175
Query: 938 YMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
Y APE + + D++S G + E++T R
Sbjct: 176 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 94/214 (43%), Gaps = 21/214 (9%)
Query: 767 NLTSANVIGTGSSGVV---YRVTIPNGETLAV---KKMWSSDESGAFSSEIQTLGSIRHK 820
N +G GS G V Y T L + K + SD G EI L +RH
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 821 NIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHH 880
+I++L +K+ ++ +Y N ++ ++ EAR + A+ Y H
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR--DKMSEQEAR-RFFQQIISAVEYCHR 121
Query: 881 DCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMA 940
I+H D+K N+LL +ADFGL+ I++ D N KT+ GS Y A
Sbjct: 122 H---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT---DGNFLKTS-----CGSPNYAA 170
Query: 941 PEHASMQRIT-EKSDVYSFGVVLLEVLTGRHPLD 973
PE S + + DV+S GV+L +L R P D
Sbjct: 171 PEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I With
Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I With
Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I With
Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I With
Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 767 NLTSANVIGTGSSGVVYRVTIPN-GETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
+ T VIG GS GVVY+ + + GE +A+KK+ + E+Q + + H NIVRL
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRL 112
Query: 826 LGW----GSNKNLKL--LFYDYLPNGSLSSLLHGAGKGGADWEARYE--VVLGVAHALAY 877
+ G K+ L DY+P H + + Y + + +LAY
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 878 LHHDCMPPILHGDVKAMNVLLGPGYQA-YLADFGLAR-IVSGSGDDN--CSKTNQRPQLA 933
+H I H D+K N+LL P L DFG A+ +V G + + CS+ + P+L
Sbjct: 172 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 228
Query: 934 -GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLM 992
G+ Y T DV+S G VL E+L G+ P PG + + Q ++ ++
Sbjct: 229 FGATDY-----------TSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVEIIKVL 273
Query: 993 LNLEAEQTQ 1001
EQ +
Sbjct: 274 GTPTREQIR 282
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 94/214 (43%), Gaps = 21/214 (9%)
Query: 767 NLTSANVIGTGSSGVV---YRVTIPNGETLAV---KKMWSSDESGAFSSEIQTLGSIRHK 820
N +G GS G V Y T L + K + SD G EI L +RH
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 821 NIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHH 880
+I++L +K+ ++ +Y N ++ ++ EAR + A+ Y H
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR--DKMSEQEAR-RFFQQIISAVEYCHR 131
Query: 881 DCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMA 940
I+H D+K N+LL +ADFGL+ I++ D N KT+ GS Y A
Sbjct: 132 H---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT---DGNFLKTS-----CGSPNYAA 180
Query: 941 PEHASMQRIT-EKSDVYSFGVVLLEVLTGRHPLD 973
PE S + + DV+S GV+L +L R P D
Sbjct: 181 PEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 94/214 (43%), Gaps = 21/214 (9%)
Query: 767 NLTSANVIGTGSSGVV---YRVTIPNGETLAV---KKMWSSDESGAFSSEIQTLGSIRHK 820
N +G GS G V Y T L + K + SD G EI L +RH
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 821 NIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHH 880
+I++L +K+ ++ +Y N ++ ++ EAR + A+ Y H
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR--DKMSEQEAR-RFFQQIISAVEYCHR 125
Query: 881 DCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMA 940
I+H D+K N+LL +ADFGL+ I++ D N KT+ GS Y A
Sbjct: 126 H---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT---DGNFLKTS-----CGSPNYAA 174
Query: 941 PEHASMQRIT-EKSDVYSFGVVLLEVLTGRHPLD 973
PE S + + DV+S GV+L +L R P D
Sbjct: 175 PEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen Synthase
Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen Synthase
Kinase-3 Inhibitors
Length = 424
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 767 NLTSANVIGTGSSGVVYRVTIPN-GETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
+ T VIG GS GVVY+ + + GE +A+KK+ + E+Q + + H NIVRL
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRL 116
Query: 826 LGW----GSNKNLKL--LFYDYLPNGSLSSLLHGAGKGGADWEARYE--VVLGVAHALAY 877
+ G K+ L DY+P H + + Y + + +LAY
Sbjct: 117 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQTLPVIYVKLYMYQLFRSLAY 175
Query: 878 LHHDCMPPILHGDVKAMNVLLGPGYQA-YLADFGLAR-IVSGSGDDN--CSKTNQRPQLA 933
+H I H D+K N+LL P L DFG A+ +V G + + CS+ + P+L
Sbjct: 176 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 232
Query: 934 -GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLM 992
G+ Y T DV+S G VL E+L G+ P PG + + Q ++ ++
Sbjct: 233 FGATDY-----------TSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVEIIKVL 277
Query: 993 LNLEAEQTQ 1001
EQ +
Sbjct: 278 GTPTREQIR 286
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With Nms-869553a
Length = 422
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 767 NLTSANVIGTGSSGVVYRVTIPN-GETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
+ T VIG GS GVVY+ + + GE +A+KK+ + E+Q + + H NIVRL
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRL 114
Query: 826 LGW----GSNKNLKL--LFYDYLPNGSLSSLLHGAGKGGADWEARYE--VVLGVAHALAY 877
+ G K+ L DY+P H + + Y + + +LAY
Sbjct: 115 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQTLPVIYVKLYMYQLFRSLAY 173
Query: 878 LHHDCMPPILHGDVKAMNVLLGPGYQA-YLADFGLAR-IVSGSGDDN--CSKTNQRPQLA 933
+H I H D+K N+LL P L DFG A+ +V G + + CS+ + P+L
Sbjct: 174 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 230
Query: 934 -GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLM 992
G+ Y T DV+S G VL E+L G+ P PG + + Q ++ ++
Sbjct: 231 FGATDY-----------TSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVEIIKVL 275
Query: 993 LNLEAEQTQ 1001
EQ +
Sbjct: 276 GTPTREQIR 284
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 101/231 (43%), Gaps = 17/231 (7%)
Query: 747 DTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYRVT-IPNGETLAVKKMWSSDESG 805
D W+ Q ++ D V+ + +GTG+ GVV+RVT G A K + + ES
Sbjct: 138 DIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD 197
Query: 806 --AFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEA 863
EIQT+ +RH +V L + N ++ Y+++ G L + ++ EA
Sbjct: 198 KETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEA 257
Query: 864 RYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGY--QAYLADFGLARIVSGSGDD 921
E + V L ++H + +H D+K N++ + L DFGL +
Sbjct: 258 -VEYMRQVCKGLCHMHENNY---VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV 313
Query: 922 NCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
+ G+ + APE A + + +D++S GV+ +L+G P
Sbjct: 314 KVT--------TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 356
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 16/201 (7%)
Query: 774 IGTGSSGVVYRVTIPN-GETLAVKKM--WSSDESGAFSSEIQTLGSIRHKNIVRLLGWGS 830
IG GS+G+V T + G+ +AVKKM +E+ + H N+V +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 831 NKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGD 890
+ + ++L G+L+ ++ + E V L V AL+YLH+ ++H D
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTR---MNEEQIATVCLSVLRALSYLHNQ---GVIHRD 166
Query: 891 VKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRIT 950
+K+ ++LL + L+DFG VS + +R L G+ +MAPE S
Sbjct: 167 IKSDSILLTSDGRIKLSDFGFCAQVS-------KEVPKRKXLVGTPYWMAPEVISRLPYG 219
Query: 951 EKSDVYSFGVVLLEVLTGRHP 971
+ D++S G++++E++ G P
Sbjct: 220 TEVDIWSLGIMVIEMIDGEPP 240
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 94/214 (43%), Gaps = 21/214 (9%)
Query: 767 NLTSANVIGTGSSGVV---YRVTIPNGETLAV---KKMWSSDESGAFSSEIQTLGSIRHK 820
N +G GS G V Y T L + K + SD G EI L +RH
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 821 NIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHH 880
+I++L +K+ ++ +Y N ++ ++ EAR + A+ Y H
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR--DKMSEQEAR-RFFQQIISAVEYCHR 130
Query: 881 DCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMA 940
I+H D+K N+LL +ADFGL+ I++ D N KT+ GS Y A
Sbjct: 131 H---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT---DGNFLKTS-----CGSPNYAA 179
Query: 941 PEHASMQRIT-EKSDVYSFGVVLLEVLTGRHPLD 973
PE S + + DV+S GV+L +L R P D
Sbjct: 180 PEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 774 IGTGSSGVVYRV-TIPNGETLAVKKM----WSSDESGAFSSEIQTLGSIRHKNIVRLL-G 827
IG GS G V + +G +K++ SS E E+ L +++H NIV+
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARY-EVVLGVAHALAYLHHDCMPPI 886
+ N +L ++ DY G L ++ A KG E + + + + AL ++H I
Sbjct: 92 FEENGSLYIVM-DYCEGGDLFKRIN-AQKGVLFQEDQILDWFVQICLALKHVHDR---KI 146
Query: 887 LHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM 946
LH D+K+ N+ L L DFG+AR++ N + R + Y Y++PE
Sbjct: 147 LHRDIKSQNIFLTKDGTVQLGDFGIARVL------NSTVELARACIGTPY-YLSPEICEN 199
Query: 947 QRITEKSDVYSFGVVLLEVLTGRHPLD 973
+ KSD+++ G VL E+ T +H +
Sbjct: 200 KPYNNKSDIWALGCVLYELCTLKHAFE 226
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 767 NLTSANVIGTGSSGVVYRVTIPN-GETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
+ T VIG GS GVVY+ + + GE +A+KK+ + E+Q + + H NIVRL
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRL 157
Query: 826 LGW----GSNKNLKL--LFYDYLPNGSLSSLLHGAGKGGADWEARYE--VVLGVAHALAY 877
+ G K+ L DY+P H + + Y + + +LAY
Sbjct: 158 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQTLPVIYVKLYMYQLFRSLAY 216
Query: 878 LHHDCMPPILHGDVKAMNVLLGPGYQA-YLADFGLAR-IVSGSGDDN--CSKTNQRPQLA 933
+H I H D+K N+LL P L DFG A+ +V G + + CS+ + P+L
Sbjct: 217 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 273
Query: 934 -GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLM 992
G+ Y T DV+S G VL E+L G+ P PG + + Q ++ ++
Sbjct: 274 FGATDY-----------TSSIDVWSAGCVLAELLLGQ----PIFPGDSGVDQLVEIIKVL 318
Query: 993 LNLEAEQTQ 1001
EQ +
Sbjct: 319 GTPTREQIR 327
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 148/306 (48%), Gaps = 37/306 (12%)
Query: 126 RELTFIDLSGNSLWGEIPTEVCRLRKLESLYLNTNLLEGEIPSDIGNLSSLAYLTLYDNQ 185
LT I+ S N L P + L KL + +N N + P + NL++L LTL++NQ
Sbjct: 63 NNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQ 118
Query: 186 LSGKIP-KSIGALSKLQVFRAGGNQNLKGELPWEIGNCSNLVMLGLAETSISGNVPSSIG 244
++ P K++ L++L++ + N ++ G ++L L +++
Sbjct: 119 ITDIDPLKNLTNLNRLEL-----SSNTISDISALSG-LTSLQQLNFGNQVTDLKPLANLT 172
Query: 245 MLERIQTIAIYTSLLSGPIPEEIGNCSELQNLYLYQNSISGPIPGRIGALSKLKSLLLWQ 304
LER+ + S +S + + L++L N IS P +G L+ L L L
Sbjct: 173 TLERLDISSNKVSDIS-----VLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNG 225
Query: 305 NSL--VGAIPDELGSCTELTVVDFSDNLLTGSIPRSFGNLLKLQELQLSVNQLSGTIPIE 362
N L +G L S T LT +D ++N ++ P S L KL EL+L NQ+S P
Sbjct: 226 NQLKDIGT----LASLTNLTDLDLANNQISNLAPLS--GLTKLTELKLGANQISNISP-- 277
Query: 363 IATCTALTHLEIDNNAISGEIP-ADIGNINGLTLFFAWKNKLTGNIP-ESLSQCQELQAL 420
+A TALT+LE++ N + P +++ N+ LTL+F N ++ P SL++ Q L
Sbjct: 278 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYF---NNISDISPVSSLTKLQRL--- 331
Query: 421 DFSYNN 426
F YNN
Sbjct: 332 -FFYNN 336
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 97/230 (42%), Gaps = 38/230 (16%)
Query: 483 MGNLKHLNFVDMSENHLVGGIPPSVVGCQSLEFLDLHSNGLTGSVPDTLPTSLQLVDLSD 542
+ NL +LN +++S N + I ++ G SL+ L+ N +T P T+L+ +D+S
Sbjct: 125 LKNLTNLNRLELSSNT-ISDIS-ALSGLTSLQQLNF-GNQVTDLKPLANLTTLERLDISS 181
Query: 543 NRLSGSLAHSIGSLTEXXXXXXXXNQLSGRIPAEIL--------------------SCRK 582
N++S + LT NQ+S P IL S
Sbjct: 182 NKVSD--ISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTN 239
Query: 583 LILLDIGNNRFSGEIPKELGQXXXXXXXXXXXXXQFSGEIPSEFSGLTKLGILDLSHNKL 642
L LD+ NN+ S P Q S P +GLT L L+L+ N+L
Sbjct: 240 LTDLDLANNQISNLAPLS---GLTKLTELKLGANQISNISP--LAGLTALTNLELNENQL 294
Query: 643 SGDLDALASLQNLVSLNVSFNDFSGELPNTP-------FFRKLPLSDLAS 685
D+ +++L+NL L + FN+ S P + FF +SD++S
Sbjct: 295 E-DISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSS 343
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 17/185 (9%)
Query: 790 GETLAVKKMWSSDESGA-----FSSEIQTLGSIRHKNIVRLLGWGSNK--NLKLLFYDYL 842
GE +AVK + ESG EI+ L ++ H+NIV+ G + N L ++L
Sbjct: 50 GEQVAVKSL--KPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 107
Query: 843 PNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGY 902
P+GSL L K + + + + + + + YL +H D+ A NVL+ +
Sbjct: 108 PSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEH 163
Query: 903 QAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVL 962
Q + DFGL + + + K ++ + + APE + SDV+SFGV L
Sbjct: 164 QVKIGDFGLTKAIETDKEXXTVKDDRDSPVF----WYAPECLMQSKFYIASDVWSFGVTL 219
Query: 963 LEVLT 967
E+LT
Sbjct: 220 HELLT 224
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 101/231 (43%), Gaps = 17/231 (7%)
Query: 747 DTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYRVT-IPNGETLAVKKMWSSDESG 805
D W+ Q ++ D V+ + +GTG+ GVV+RVT G A K + + ES
Sbjct: 32 DIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD 91
Query: 806 --AFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEA 863
EIQT+ +RH +V L + N ++ Y+++ G L + ++ EA
Sbjct: 92 KETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEA 151
Query: 864 RYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGY--QAYLADFGLARIVSGSGDD 921
E + V L ++H + +H D+K N++ + L DFGL +
Sbjct: 152 -VEYMRQVCKGLCHMHENNY---VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV 207
Query: 922 NCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
+ G+ + APE A + + +D++S GV+ +L+G P
Sbjct: 208 KVT--------TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 250
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 111/246 (45%), Gaps = 34/246 (13%)
Query: 769 TSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGW 828
T+ VIG GS GVV++ + + +A+KK+ + E+Q + ++H N+V L +
Sbjct: 43 TNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFK--NRELQIMRIVKHPNVVDLKAF 100
Query: 829 ----GSNKNLKL--LFYDYLPNGSLSSLLHGAG-KGGADWEARYEVVLGVAHALAYLHHD 881
G K+ L +Y+P + H A K + + +LAY+H
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI 160
Query: 882 CMPPILHGDVKAMNVLLGPGYQAY-LADFGLARIVSGSGDDN----CSKTNQRPQLA-GS 935
I H D+K N+LL P L DFG A+I+ +G+ N CS+ + P+L G+
Sbjct: 161 G---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI-AGEPNVSXICSRYYRAPELIFGA 216
Query: 936 YGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLMLNL 995
Y T D++S G V+ E++ G+ P PG + + Q ++ ++
Sbjct: 217 TNY-----------TTNIDIWSTGCVMAELMQGQ----PLFPGESGIDQLVEIIKVLGTP 261
Query: 996 EAEQTQ 1001
EQ +
Sbjct: 262 SREQIK 267
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 56/190 (29%), Positives = 83/190 (43%), Gaps = 28/190 (14%)
Query: 790 GETLAVKKMWSS--DESGAFSSEIQTLGSIRHKNIVRLLG--WGSNKNLKLLFYDYLPNG 845
G +AVK++ S D+ F EIQ L ++ IV+ G +G + L +YLP+G
Sbjct: 52 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 111
Query: 846 SLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCM-------PPILHGDVKAMNVLL 898
L L R+ L + L Y C +H D+ A N+L+
Sbjct: 112 CLRDFLQ-----------RHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV 160
Query: 899 GPGYQAYLADFGLARIVSGSGDDNCSKT-NQRPQLAGSYGYMAPEHASMQRITEKSDVYS 957
+ADFGLA+++ D + Q P + APE S + +SDV+S
Sbjct: 161 ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF-----WYAPESLSDNIFSRQSDVWS 215
Query: 958 FGVVLLEVLT 967
FGVVL E+ T
Sbjct: 216 FGVVLYELFT 225
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 114/250 (45%), Gaps = 36/250 (14%)
Query: 741 NSFTADDTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYRVTIPN-GE-----TLA 794
NS+T D ++ +K +F + NL +G G+ G V T G+ +A
Sbjct: 25 NSYTFIDPTQLPYNEKWEFPRN----NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVA 80
Query: 795 VKKMWSS---DESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSL 850
VK + S+ DE A SE++ + + +H+NIV LLG ++ L+ +Y G L +
Sbjct: 81 VKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNF 140
Query: 851 LHGAGK----------GGADWEAR--YEVVLGVAHALAYL-HHDCMPPILHGDVKAMNVL 897
L + + R VA +A+L +C +H DV A NVL
Sbjct: 141 LRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVL 196
Query: 898 LGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYS 957
L G+ A + DFGLAR + + K N R + +MAPE T +SDV+S
Sbjct: 197 LTNGHVAKIGDFGLARDIMNDS-NYIVKGNARLPVK----WMAPESIFDCVYTVQSDVWS 251
Query: 958 FGVVLLEVLT 967
+G++L E+ +
Sbjct: 252 YGILLWEIFS 261
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 56/190 (29%), Positives = 83/190 (43%), Gaps = 28/190 (14%)
Query: 790 GETLAVKKMWSS--DESGAFSSEIQTLGSIRHKNIVRLLG--WGSNKNLKLLFYDYLPNG 845
G +AVK++ S D+ F EIQ L ++ IV+ G +G + L +YLP+G
Sbjct: 36 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSG 95
Query: 846 SLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCM-------PPILHGDVKAMNVLL 898
L L R+ L + L Y C +H D+ A N+L+
Sbjct: 96 CLRDFLQ-----------RHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV 144
Query: 899 GPGYQAYLADFGLARIVSGSGDDNCSKT-NQRPQLAGSYGYMAPEHASMQRITEKSDVYS 957
+ADFGLA+++ D + Q P + APE S + +SDV+S
Sbjct: 145 ESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIF-----WYAPESLSDNIFSRQSDVWS 199
Query: 958 FGVVLLEVLT 967
FGVVL E+ T
Sbjct: 200 FGVVLYELFT 209
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 103/243 (42%), Gaps = 19/243 (7%)
Query: 736 TRMANNSFTADDTWEMTLYQKL---DFSIDDVVRNLTSANVIGTGSSGVVYRVTIPN-GE 791
+R S +D + L +KL D+ + V T +G GS G V+R+ G
Sbjct: 60 SRSREPSPKTEDNEGVLLTEKLKPVDYEYREEVHWATHQLRLGRGSFGEVHRMEDKQTGF 119
Query: 792 TLAVKKMWSSDESGAF-SSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSL 850
AVKK+ F + E+ + IV L G +F + L GSL L
Sbjct: 120 QCAVKKV----RLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQL 175
Query: 851 LHGAGKGGADWEARYEVVLGVA-HALAYLHHDCMPPILHGDVKAMNVLLGP-GYQAYLAD 908
+ + G E R LG A L YLH ILHGDVKA NVLL G A L D
Sbjct: 176 VK---EQGCLPEDRALYYLGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCD 229
Query: 909 FGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTG 968
FG A + G T + G+ +MAPE + K DV+S ++L +L G
Sbjct: 230 FGHAVCLQPDGLGKSLLTGD--YIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
Query: 969 RHP 971
HP
Sbjct: 288 CHP 290
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 17/185 (9%)
Query: 790 GETLAVKKMWSSDESGA-----FSSEIQTLGSIRHKNIVRLLGWGSNK--NLKLLFYDYL 842
GE +AVK + ESG EI+ L ++ H+NIV+ G + N L ++L
Sbjct: 38 GEQVAVKSL--KPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 95
Query: 843 PNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGY 902
P+GSL L K + + + + + + + YL +H D+ A NVL+ +
Sbjct: 96 PSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEH 151
Query: 903 QAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVL 962
Q + DFGL + + + K ++ + + APE + SDV+SFGV L
Sbjct: 152 QVKIGDFGLTKAIETDKEXXTVKDDRDSPVF----WYAPECLMQSKFYIASDVWSFGVTL 207
Query: 963 LEVLT 967
E+LT
Sbjct: 208 HELLT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 56/190 (29%), Positives = 83/190 (43%), Gaps = 28/190 (14%)
Query: 790 GETLAVKKMWSS--DESGAFSSEIQTLGSIRHKNIVRLLG--WGSNKNLKLLFYDYLPNG 845
G +AVK++ S D+ F EIQ L ++ IV+ G +G + L +YLP+G
Sbjct: 40 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 99
Query: 846 SLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCM-------PPILHGDVKAMNVLL 898
L L R+ L + L Y C +H D+ A N+L+
Sbjct: 100 CLRDFLQ-----------RHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV 148
Query: 899 GPGYQAYLADFGLARIVSGSGDDNCSKT-NQRPQLAGSYGYMAPEHASMQRITEKSDVYS 957
+ADFGLA+++ D + Q P + APE S + +SDV+S
Sbjct: 149 ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF-----WYAPESLSDNIFSRQSDVWS 203
Query: 958 FGVVLLEVLT 967
FGVVL E+ T
Sbjct: 204 FGVVLYELFT 213
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 92/211 (43%), Gaps = 17/211 (8%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSIRH 819
+ N IG G+ GVVY+ GE +A+KK+ E+ S EI L + H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
NIV+LL +N L +++L + L + + G + + LA+ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+LH D+K N+L+ LADFGLAR G + T++ + Y
Sbjct: 121 SHR---VLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHE----VVTLWYR 170
Query: 940 APE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
APE + + D++S G + E++T R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 92/211 (43%), Gaps = 17/211 (8%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSIRH 819
+ N IG G+ GVVY+ GE +A+KK+ E+ S EI L + H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
NIV+LL +N L +++L + L + + G + + LA+ H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+LH D+K N+L+ LADFGLAR G + T++ + Y
Sbjct: 120 SHR---VLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHE----VVTLWYR 169
Query: 940 APE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
APE + + D++S G + E++T R
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 56/190 (29%), Positives = 83/190 (43%), Gaps = 28/190 (14%)
Query: 790 GETLAVKKMWSS--DESGAFSSEIQTLGSIRHKNIVRLLG--WGSNKNLKLLFYDYLPNG 845
G +AVK++ S D+ F EIQ L ++ IV+ G +G + L +YLP+G
Sbjct: 39 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 98
Query: 846 SLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCM-------PPILHGDVKAMNVLL 898
L L R+ L + L Y C +H D+ A N+L+
Sbjct: 99 CLRDFLQ-----------RHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV 147
Query: 899 GPGYQAYLADFGLARIVSGSGDDNCSKT-NQRPQLAGSYGYMAPEHASMQRITEKSDVYS 957
+ADFGLA+++ D + Q P + APE S + +SDV+S
Sbjct: 148 ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF-----WYAPESLSDNIFSRQSDVWS 202
Query: 958 FGVVLLEVLT 967
FGVVL E+ T
Sbjct: 203 FGVVLYELFT 212
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 23/180 (12%)
Query: 807 FSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKG------GAD 860
F E + L +++H++IV+ G + + ++ ++Y+ +G L+ L G G
Sbjct: 64 FQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQP 123
Query: 861 WEARYEVVLG--------VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLA 912
+A+ E+ L +A + YL +H D+ N L+G + DFG++
Sbjct: 124 RQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMS 180
Query: 913 RIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
R V + P +M PE ++ T +SDV+SFGV+L E+ T G+ P
Sbjct: 181 RDVYSTDYYRVGGHTMLP-----IRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 92/211 (43%), Gaps = 17/211 (8%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSIRH 819
+ N IG G+ GVVY+ GE +A+KK+ E+ S EI L + H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
NIV+LL +N L +++L + L + + G + + LA+ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+LH D+K N+L+ LADFGLAR G + T++ + Y
Sbjct: 121 SHR---VLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHE----VVTLWYR 170
Query: 940 APE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
APE + + D++S G + E++T R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 92/211 (43%), Gaps = 17/211 (8%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSIRH 819
+ N IG G+ GVVY+ GE +A+KK+ E+ S EI L + H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
NIV+LL +N L +++L + L + + G + + LA+ H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+LH D+K N+L+ LADFGLAR G + T++ + Y
Sbjct: 122 SHR---VLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHE----VVTLWYR 171
Query: 940 APE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
APE + + D++S G + E++T R
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 83/202 (41%), Gaps = 18/202 (8%)
Query: 772 NVIGTGSSGVVYR--VTIPNGETLAV-----KKMWSSDESGAFSSEIQTLGSIRHKNIVR 824
IG G G V++ P +AV K S F E T+ H +IV+
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 825 LLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
L+G +N + + G L S L K D + ++ ALAYL
Sbjct: 76 LIG-VITENPVWIIMELCTLGELRSFLQ-VRKFSLDLASLILYAYQLSTALAYLESK--- 130
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+H D+ A NVL+ L DFGL+R + S SK +MAPE
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKL------PIKWMAPESI 184
Query: 945 SMQRITEKSDVYSFGVVLLEVL 966
+ +R T SDV+ FGV + E+L
Sbjct: 185 NFRRFTSASDVWMFGVCMWEIL 206
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 91/209 (43%), Gaps = 17/209 (8%)
Query: 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSIRHKN 821
N IG G+ GVVY+ GE +A+KK+ E+ S EI L + H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 822 IVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHD 881
IV+LL +N L +++L + L + + G + + LA+ H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 882 CMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAP 941
+LH D+K N+L+ LADFGLAR G + T++ + Y AP
Sbjct: 122 R---VLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHE----VVTLWYRAP 171
Query: 942 E-HASMQRITEKSDVYSFGVVLLEVLTGR 969
E + + D++S G + E++T R
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 16/201 (7%)
Query: 774 IGTGSSGVVYRVTI-PNGETLAVKKM--WSSDESGAFSSEIQTLGSIRHKNIVRLLGWGS 830
IG GS+G+V T+ +G+ +AVKKM +E+ + +H+N+V +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 831 NKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGD 890
+ + ++L G+L+ ++ + E V L V AL+ LH ++H D
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQ---GVIHRD 145
Query: 891 VKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRIT 950
+K+ ++LL + L+DFG VS + +R L G+ +MAPE S
Sbjct: 146 IKSDSILLTHDGRVKLSDFGFCAQVS-------KEVPRRKXLVGTPYWMAPELISRLPYG 198
Query: 951 EKSDVYSFGVVLLEVLTGRHP 971
+ D++S G++++E++ G P
Sbjct: 199 PEVDIWSLGIMVIEMVDGEPP 219
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 16/201 (7%)
Query: 774 IGTGSSGVVYRVTI-PNGETLAVKKM--WSSDESGAFSSEIQTLGSIRHKNIVRLLGWGS 830
IG GS+G+V T+ +G+ +AVKKM +E+ + +H+N+V +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 831 NKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGD 890
+ + ++L G+L+ ++ + E V L V AL+ LH ++H D
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQ---GVIHRD 141
Query: 891 VKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRIT 950
+K+ ++LL + L+DFG VS + +R L G+ +MAPE S
Sbjct: 142 IKSDSILLTHDGRVKLSDFGFCAQVS-------KEVPRRKXLVGTPYWMAPELISRLPYG 194
Query: 951 EKSDVYSFGVVLLEVLTGRHP 971
+ D++S G++++E++ G P
Sbjct: 195 PEVDIWSLGIMVIEMVDGEPP 215
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 21/217 (9%)
Query: 766 RNLTSANVIGTGSSGVVYR--VTIPNGETLAVK------KMWSSDES-GAFSSEIQTLGS 816
++L +G GS GVV R P+G+T++V + S E+ F E+ + S
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSL-SSLLHGAGKGGADWEARYEVVLGVAHAL 875
+ H+N++RL G +K++ + P GSL L G +RY V VA +
Sbjct: 72 LDHRNLIRLYGVVLTPPMKMV-TELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 128
Query: 876 AYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGS 935
YL +H D+ A N+LL + DFGL R + + D + +++ A
Sbjct: 129 GYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA-- 183
Query: 936 YGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
+ APE + + SD + FGV L E+ T G+ P
Sbjct: 184 --WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 16/201 (7%)
Query: 774 IGTGSSGVVYRVTI-PNGETLAVKKM--WSSDESGAFSSEIQTLGSIRHKNIVRLLGWGS 830
IG GS+G+V T+ +G+ +AVKKM +E+ + +H+N+V +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 831 NKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGD 890
+ + ++L G+L+ ++ + E V L V AL+ LH ++H D
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQ---GVIHRD 150
Query: 891 VKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRIT 950
+K+ ++LL + L+DFG VS + +R L G+ +MAPE S
Sbjct: 151 IKSDSILLTHDGRVKLSDFGFCAQVS-------KEVPRRKXLVGTPYWMAPELISRLPYG 203
Query: 951 EKSDVYSFGVVLLEVLTGRHP 971
+ D++S G++++E++ G P
Sbjct: 204 PEVDIWSLGIMVIEMVDGEPP 224
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 16/201 (7%)
Query: 774 IGTGSSGVVYRVTI-PNGETLAVKKM--WSSDESGAFSSEIQTLGSIRHKNIVRLLGWGS 830
IG GS+G+V T+ +G+ +AVKKM +E+ + +H+N+V +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 831 NKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGD 890
+ + ++L G+L+ ++ + E V L V AL+ LH ++H D
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQ---GVIHRD 152
Query: 891 VKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRIT 950
+K+ ++LL + L+DFG VS + +R L G+ +MAPE S
Sbjct: 153 IKSDSILLTHDGRVKLSDFGFCAQVS-------KEVPRRKXLVGTPYWMAPELISRLPYG 205
Query: 951 EKSDVYSFGVVLLEVLTGRHP 971
+ D++S G++++E++ G P
Sbjct: 206 PEVDIWSLGIMVIEMVDGEPP 226
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 95/219 (43%), Gaps = 16/219 (7%)
Query: 757 LDFSIDDVVRNLTSANVIGTGSSGVVYRVTIPN-GETLAVKKMWSSDESGAFS-SEIQTL 814
+D+ + V +T +G GS G V+R+ G AVKK+ F E+
Sbjct: 49 VDYEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKV----RLEVFRVEELVAC 104
Query: 815 GSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVA-H 873
+ IV L G +F + L GSL L+ + G E R LG A
Sbjct: 105 AGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIK---QMGCLPEDRALYYLGQALE 161
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGP-GYQAYLADFGLARIVSGSGDDNCSKTNQRPQL 932
L YLH ILHGDVKA NVLL G +A L DFG A + G T +
Sbjct: 162 GLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD--YI 216
Query: 933 AGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHP 971
G+ +MAPE + K D++S ++L +L G HP
Sbjct: 217 PGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 95/219 (43%), Gaps = 16/219 (7%)
Query: 757 LDFSIDDVVRNLTSANVIGTGSSGVVYRVTIPN-GETLAVKKMWSSDESGAFS-SEIQTL 814
+D+ + V +T +G GS G V+R+ G AVKK+ F E+
Sbjct: 65 VDYEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKV----RLEVFRVEELVAC 120
Query: 815 GSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVA-H 873
+ IV L G +F + L GSL L+ + G E R LG A
Sbjct: 121 AGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIK---QMGCLPEDRALYYLGQALE 177
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGP-GYQAYLADFGLARIVSGSGDDNCSKTNQRPQL 932
L YLH ILHGDVKA NVLL G +A L DFG A + G T +
Sbjct: 178 GLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD--YI 232
Query: 933 AGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHP 971
G+ +MAPE + K D++S ++L +L G HP
Sbjct: 233 PGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLGWGSNK 832
+G G G V+ T +AVK M S AF +E + +++H +V+L + +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKE 249
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ ++ +++ GSL L + +A +A++ +H D++
Sbjct: 250 PIYII-TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY---IHRDLR 305
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
A N+L+ +ADFGLAR+ + + APE + T K
Sbjct: 306 AANILVSASLVCKIADFGLARVGA----------------KFPIKWTAPEAINFGSFTIK 349
Query: 953 SDVYSFGVVLLEVLT-GRHP 971
SDV+SFG++L+E++T GR P
Sbjct: 350 SDVWSFGILLMEIVTYGRIP 369
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 91/232 (39%), Gaps = 39/232 (16%)
Query: 767 NLTSANVIGTGSSGVVYRVTIP-----NGETLAVKKMW----SSDESGAFSSEIQTLGSI 817
N+ IG G+ G V++ P T+ KM S+D F E +
Sbjct: 48 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF 107
Query: 818 RHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGK------GGADWEARYEV---- 867
+ NIV+LLG + L ++Y+ G L+ L +D R V
Sbjct: 108 DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPG 167
Query: 868 ------------VLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIV 915
VA +AYL +H D+ N L+G +ADFGL+R +
Sbjct: 168 PPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNI 224
Query: 916 SGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
S D + N A +M PE R T +SDV+++GVVL E+ +
Sbjct: 225 Y-SADYYKADGND----AIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 764 VVRNLTSANVIGTGSSGVVYR-VTIPNGETLAVKKMW-----SSDESGAFSSEIQTLGSI 817
V+R +G G+ G+V++ + GE +AVKK++ S+D F EI L +
Sbjct: 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-EIMILTEL 65
Query: 818 R-HKNIVRLLG--WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGA-DWEARYEVVLGVAH 873
H+NIV LL N L +DY+ LH + + + VV +
Sbjct: 66 SGHENIVNLLNVLRADNDRDVYLVFDYMETD-----LHAVIRANILEPVHKQYVVYQLIK 120
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSG----------SGDDNC 923
+ YLH + LH D+K N+LL +ADFGL+R S ++N
Sbjct: 121 VIKYLHSGGL---LHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENT 177
Query: 924 SKTNQRPQLAGSY----GYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978
+ + Y Y APE + T+ D++S G +L E+L G+ P PG
Sbjct: 178 ENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK----PIFPG 233
Query: 979 GAPLVQ 984
+ + Q
Sbjct: 234 SSTMNQ 239
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 95/226 (42%), Gaps = 36/226 (15%)
Query: 767 NLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSE--IQTLGSIRHKNIVR 824
NL +IG G G VY+ ++ E K++S F +E I + + H NI R
Sbjct: 14 NLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIAR 71
Query: 825 LLG-----WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
+ + LL +Y PNGSL L +DW + + V LAYLH
Sbjct: 72 FIVGDERVTADGRMEYLLVMEYYPNGSLXKYL---SLHTSDWVSSCRLAHSVTRGLAYLH 128
Query: 880 HDC------MPPILHGDVKAMNVLLGPGYQAYLADFGLA------RIVSGSGDDNCSKTN 927
+ P I H D+ + NVL+ ++DFGL+ R+V +DN + +
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE 188
Query: 928 QRPQLAGSYGYMAPEH-------ASMQRITEKSDVYSFGVVLLEVL 966
G+ YMAPE + ++ D+Y+ G++ E+
Sbjct: 189 -----VGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 18/218 (8%)
Query: 762 DDVVRNLTSANVIGTGS-SGVVYRVTIPNGETLAVKKMWSSDESGA----FSSEIQTLGS 816
D++++ IGTG + V I GE +A+K M + G+ +EI+ L +
Sbjct: 6 DELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIM-DKNTLGSDLPRIKTEIEALKN 64
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALA 876
+RH++I +L N + +Y P G L + + + E R V + A+A
Sbjct: 65 LRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEE-ETRV-VFRQIVSAVA 122
Query: 877 YLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSY 936
Y+H H D+K N+L ++ L DFGL G+ D + GS
Sbjct: 123 YVHSQGYA---HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTC------CGSL 173
Query: 937 GYMAPEHAS-MQRITEKSDVYSFGVVLLEVLTGRHPLD 973
Y APE + ++DV+S G++L ++ G P D
Sbjct: 174 AYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD 211
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 95/219 (43%), Gaps = 16/219 (7%)
Query: 757 LDFSIDDVVRNLTSANVIGTGSSGVVYRVTIPN-GETLAVKKMWSSDESGAFS-SEIQTL 814
+D+ + V +T +G GS G V+R+ G AVKK+ F E+
Sbjct: 63 VDYEYREEVHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKV----RLEVFRVEELVAC 118
Query: 815 GSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVA-H 873
+ IV L G +F + L GSL L+ + G E R LG A
Sbjct: 119 AGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIK---QMGCLPEDRALYYLGQALE 175
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGP-GYQAYLADFGLARIVSGSGDDNCSKTNQRPQL 932
L YLH ILHGDVKA NVLL G +A L DFG A + G T +
Sbjct: 176 GLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD--YI 230
Query: 933 AGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHP 971
G+ +MAPE + K D++S ++L +L G HP
Sbjct: 231 PGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 90/219 (41%), Gaps = 25/219 (11%)
Query: 766 RNLTSANVIGTGSSGVVYRVTI------PNGETLAVK---KMWSSDESGAFSSEIQTLGS 816
+N+T +G G+ G VY + P+ +AVK ++ S + F E +
Sbjct: 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 130
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR-----YEVVLGV 871
H+NIVR +G + + + + G L S L + + V +
Sbjct: 131 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 190
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLL---GPGYQAYLADFGLARIVSGSGDDNCSKTNQ 928
A YL + +H D+ A N LL GPG A + DFG+AR + +G
Sbjct: 191 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAM 247
Query: 929 RPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
P +M PE T K+D +SFGV+L E+ +
Sbjct: 248 LP-----VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 29/221 (13%)
Query: 767 NLTSANVIGTGSSGVVYR-VTIPNGETLAVK---KMWSSDESGAFSSEI----QTLGSIR 818
L V+G+G+ G VY+ + IP+GE + + K+ + S + EI + +
Sbjct: 18 ELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVG 77
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSL-SSLLHGAGKGGA----DWEARYEVVLGVAH 873
+ RLLG ++L+ +P G L + G+ G+ +W + +A
Sbjct: 78 SPYVSRLLGICLTSTVQLV-TQLMPYGCLLDHVRENRGRLGSQDLLNW------CMQIAK 130
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
++YL ++H D+ A NVL+ + DFGLAR++ + + + P
Sbjct: 131 GMSYLED---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVP--- 184
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
+MA E +R T +SDV+S+GV + E++T G P D
Sbjct: 185 --IKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 83/202 (41%), Gaps = 18/202 (8%)
Query: 772 NVIGTGSSGVVYR--VTIPNGETLAV-----KKMWSSDESGAFSSEIQTLGSIRHKNIVR 824
IG G G V++ P LAV K S F E T+ H +IV+
Sbjct: 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 72
Query: 825 LLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
L+G +N + + G L S L K D + ++ ALAYL
Sbjct: 73 LIG-VITENPVWIIMELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTALAYLESK--- 127
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+H D+ A NVL+ L DFGL+R + S SK +MAPE
Sbjct: 128 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL------PIKWMAPESI 181
Query: 945 SMQRITEKSDVYSFGVVLLEVL 966
+ +R T SDV+ FGV + E+L
Sbjct: 182 NFRRFTSASDVWMFGVCMWEIL 203
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 105/245 (42%), Gaps = 23/245 (9%)
Query: 736 TRMANNSFTADDTWEMTLYQKL---DFSIDDVVRNLTSANVIGTGSSGVVYRVTIPN-GE 791
+R S +D + L +KL D+ + V T +G GS G V+R+ G
Sbjct: 41 SRSREPSPKTEDNEGVLLTEKLKPVDYEYREEVHWATHQLRLGRGSFGEVHRMEDKQTGF 100
Query: 792 TLAVKKMWSSDESGAF-SSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSL 850
AVKK+ F + E+ + IV L G +F + L GSL L
Sbjct: 101 QCAVKKV----RLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQL 156
Query: 851 LHGAGKGGADWEARYEVVLGVA-HALAYLHHDCMPPILHGDVKAMNVLLGP-GYQAYLAD 908
+ + G E R LG A L YLH ILHGDVKA NVLL G A L D
Sbjct: 157 VK---EQGCLPEDRALYYLGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCD 210
Query: 909 FGLARIVS--GSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVL 966
FG A + G G D + + G+ +MAPE + K DV+S ++L +L
Sbjct: 211 FGHAVCLQPDGLGKDLLTGDY----IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHML 266
Query: 967 TGRHP 971
G HP
Sbjct: 267 NGCHP 271
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 83/202 (41%), Gaps = 18/202 (8%)
Query: 772 NVIGTGSSGVVYR--VTIPNGETLAV-----KKMWSSDESGAFSSEIQTLGSIRHKNIVR 824
IG G G V++ P LAV K S F E T+ H +IV+
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 825 LLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
L+G +N + + G L S L K D + ++ ALAYL
Sbjct: 76 LIG-VITENPVWIIMELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTALAYLESK--- 130
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+H D+ A NVL+ L DFGL+R + S SK +MAPE
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL------PIKWMAPESI 184
Query: 945 SMQRITEKSDVYSFGVVLLEVL 966
+ +R T SDV+ FGV + E+L
Sbjct: 185 NFRRFTSASDVWMFGVCMWEIL 206
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 90/219 (41%), Gaps = 25/219 (11%)
Query: 766 RNLTSANVIGTGSSGVVYRVTI------PNGETLAVK---KMWSSDESGAFSSEIQTLGS 816
+N+T +G G+ G VY + P+ +AVK ++ S + F E +
Sbjct: 48 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 107
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR-----YEVVLGV 871
H+NIVR +G + + + + G L S L + + V +
Sbjct: 108 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 167
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLL---GPGYQAYLADFGLARIVSGSGDDNCSKTNQ 928
A YL + +H D+ A N LL GPG A + DFG+AR + +G
Sbjct: 168 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAM 224
Query: 929 RPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
P +M PE T K+D +SFGV+L E+ +
Sbjct: 225 LP-----VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 86/210 (40%), Gaps = 20/210 (9%)
Query: 772 NVIGTGSSGVVYR--VTIPNGETLAV-----KKMWSSDESGAFSSEIQTLGSIRHKNIVR 824
IG G G V++ P LAV K S F E T+ H +IV+
Sbjct: 44 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 103
Query: 825 LLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
L+G +N + + G L S L K D + ++ ALAYL
Sbjct: 104 LIG-VITENPVWIIMELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTALAYLESK--- 158
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+H D+ A NVL+ L DFGL+R + S SK +MAPE
Sbjct: 159 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL------PIKWMAPESI 212
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974
+ +R T SDV+ FGV + E+L H + P
Sbjct: 213 NFRRFTSASDVWMFGVCMWEILM--HGVKP 240
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 106/250 (42%), Gaps = 41/250 (16%)
Query: 767 NLTSANVIGTGSSGVVYRVTI----PNGETLAV-----KKMWSSDESGAFSSEIQTLGSI 817
NL V+G+G+ G V T G ++ V K+ S E A SE++ + +
Sbjct: 46 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL 105
Query: 818 -RHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYE---------- 866
H+NIV LLG + L ++Y G L + L + ++ E YE
Sbjct: 106 GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEED 165
Query: 867 -----------VVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIV 915
VA + +L +H D+ A NVL+ G + DFGLAR +
Sbjct: 166 LNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDI 222
Query: 916 SGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDP 974
S + + N R + +MAPE T KSDV+S+G++L E+ + G +P P
Sbjct: 223 M-SDSNYVVRGNARLPVK----WMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY-P 276
Query: 975 TLPGGAPLVQ 984
+P A +
Sbjct: 277 GIPVDANFYK 286
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 17/211 (8%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSIRH 819
+ N IG G+ GVVY+ GE +A+KK+ E+ S EI L + H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
NIV+LL +N L +++L + L + + G + + L++ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCH 120
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+LH D+K N+L+ LADFGLAR G + T++ + Y
Sbjct: 121 SHR---VLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHE----VVTLWYR 170
Query: 940 APE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
APE + + D++S G + E++T R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 86/210 (40%), Gaps = 20/210 (9%)
Query: 772 NVIGTGSSGVVYR--VTIPNGETLAV-----KKMWSSDESGAFSSEIQTLGSIRHKNIVR 824
IG G G V++ P LAV K S F E T+ H +IV+
Sbjct: 19 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 78
Query: 825 LLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
L+G +N + + G L S L K D + ++ ALAYL
Sbjct: 79 LIG-VITENPVWIIMELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTALAYLESK--- 133
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+H D+ A NVL+ L DFGL+R + S SK +MAPE
Sbjct: 134 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL------PIKWMAPESI 187
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974
+ +R T SDV+ FGV + E+L H + P
Sbjct: 188 NFRRFTSASDVWMFGVCMWEILM--HGVKP 215
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 86/210 (40%), Gaps = 20/210 (9%)
Query: 772 NVIGTGSSGVVYR--VTIPNGETLAV-----KKMWSSDESGAFSSEIQTLGSIRHKNIVR 824
IG G G V++ P LAV K S F E T+ H +IV+
Sbjct: 18 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 77
Query: 825 LLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
L+G +N + + G L S L K D + ++ ALAYL
Sbjct: 78 LIG-VITENPVWIIMELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTALAYLESK--- 132
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+H D+ A NVL+ L DFGL+R + S SK +MAPE
Sbjct: 133 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL------PIKWMAPESI 186
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974
+ +R T SDV+ FGV + E+L H + P
Sbjct: 187 NFRRFTSASDVWMFGVCMWEILM--HGVKP 214
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 17/211 (8%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSIRH 819
+ N IG G+ GVVY+ GE +A+KK+ E+ S EI L + H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
NIV+LL +N L ++++ + L + + + G + + LA+ H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+LH D+K N+L+ LADFGLAR G + T++ + Y
Sbjct: 120 SHR---VLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHE----VVTLWYR 169
Query: 940 APE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
APE + + D++S G + E++T R
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 88/211 (41%), Gaps = 17/211 (8%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSIRH 819
+ N IG G+ GVVY+ GE +A+KK+ E+ S EI L + H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
NIV+LL +N L +++L + L + + + G + + LA+ H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+LH D+K N+L+ LADFGLAR + Y
Sbjct: 124 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWYR 173
Query: 940 APE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
APE + + D++S G + E++T R
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 60/211 (28%), Positives = 93/211 (44%), Gaps = 30/211 (14%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKM----WSSDESGAFSSEIQTLGSIRHKNIVRLLGWG 829
+G+G GVV +AVK + S DE F E QT+ + H +V+ G
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDE---FFQEAQTMMKLSHPKLVKFYGVC 72
Query: 830 SNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHG 889
S + + +Y+ NG L + L GK G + E+ V +A+L +H
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSHGK-GLEPSQLLEMCYDVCEGMAFLESH---QFIHR 128
Query: 890 DVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYG------YMAPEH 943
D+ A N L+ ++DFG+ R V DD Q S G + APE
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTRYVL---DD---------QYVSSVGTKFPVKWSAPEV 176
Query: 944 ASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
+ + KSDV++FG+++ EV + G+ P D
Sbjct: 177 FHYFKYSSKSDVWAFGILMWEVFSLGKMPYD 207
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 104/237 (43%), Gaps = 43/237 (18%)
Query: 755 QKLDFSIDDVVRNLTSANVIGTGSSGVVYR-VTIPNGETLAVKKMWSSDESGAFSSEIQT 813
Q DF+ +D L IG G+ G V + V P+G+ +AVK++ S+ + +
Sbjct: 15 QHWDFTAED----LKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMD 70
Query: 814 LGSIRHKN----IVRLLGWGSNKN-----LKLL------FYDYLPNGSLSSLLHGAGKGG 858
L + + IV+ G + ++L+ FY Y+ L ++ G
Sbjct: 71 LDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYV-YSVLDDVIPEEILG- 128
Query: 859 ADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGS 918
++ L AL +L + I+H D+K N+LL L DFG +SG
Sbjct: 129 -------KITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFG----ISGQ 175
Query: 919 GDDNCSKTNQRPQLAGSYGYMAPEH----ASMQRITEKSDVYSFGVVLLEVLTGRHP 971
D+ +KT AG YMAPE AS Q +SDV+S G+ L E+ TGR P
Sbjct: 176 LVDSIAKTRD----AGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 21/209 (10%)
Query: 774 IGTGSSGVVYR--VTIPNGETLAVK------KMWSSDES-GAFSSEIQTLGSIRHKNIVR 824
+G GS GVV R P+G+T++V + S E+ F E+ + S+ H+N++R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 825 LLGWGSNKNLKLLFYDYLPNGSL-SSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCM 883
L G +K++ + P GSL L G +RY V VA + YL
Sbjct: 76 LYGVVLTPPMKMV-TELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK-- 130
Query: 884 PPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEH 943
+H D+ A N+LL + DFGL R + + D + +++ A + APE
Sbjct: 131 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFA----WCAPES 185
Query: 944 ASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
+ + SD + FGV L E+ T G+ P
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 86/210 (40%), Gaps = 20/210 (9%)
Query: 772 NVIGTGSSGVVYR--VTIPNGETLAV-----KKMWSSDESGAFSSEIQTLGSIRHKNIVR 824
IG G G V++ P LAV K S F E T+ H +IV+
Sbjct: 21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 80
Query: 825 LLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
L+G +N + + G L S L K D + ++ ALAYL
Sbjct: 81 LIG-VITENPVWIIMELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTALAYLESK--- 135
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+H D+ A NVL+ L DFGL+R + S SK +MAPE
Sbjct: 136 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL------PIKWMAPESI 189
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974
+ +R T SDV+ FGV + E+L H + P
Sbjct: 190 NFRRFTSASDVWMFGVCMWEILM--HGVKP 217
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 21/209 (10%)
Query: 774 IGTGSSGVVYR--VTIPNGETLAVK------KMWSSDES-GAFSSEIQTLGSIRHKNIVR 824
+G GS GVV R P+G+T++V + S E+ F E+ + S+ H+N++R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 825 LLGWGSNKNLKLLFYDYLPNGSL-SSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCM 883
L G +K++ + P GSL L G +RY V VA + YL
Sbjct: 76 LYGVVLTPPMKMV-TELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK-- 130
Query: 884 PPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEH 943
+H D+ A N+LL + DFGL R + + D + +++ A + APE
Sbjct: 131 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA----WCAPES 185
Query: 944 ASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
+ + SD + FGV L E+ T G+ P
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 84/199 (42%), Gaps = 27/199 (13%)
Query: 788 PNGETLAVKKMWSSDESGA----FSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYL 842
PN T KM SD + SE++ + I +HKNI+ LLG + + +Y
Sbjct: 57 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 116
Query: 843 PNGSLSSLLHGAGKGGADW--------------EARYEVVLGVAHALAYLHHDCMPPILH 888
G+L L G ++ + VA + YL +H
Sbjct: 117 SKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIH 173
Query: 889 GDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQR 948
D+ A NVL+ +ADFGLAR + D TN R + +MAPE +
Sbjct: 174 RDLAARNVLVTEDNVMKIADFGLARDIHHI-DXXKKTTNGRLPVK----WMAPEALFDRI 228
Query: 949 ITEKSDVYSFGVVLLEVLT 967
T +SDV+SFGV+L E+ T
Sbjct: 229 YTHQSDVWSFGVLLWEIFT 247
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 21/209 (10%)
Query: 774 IGTGSSGVVYR--VTIPNGETLAVK------KMWSSDES-GAFSSEIQTLGSIRHKNIVR 824
+G GS GVV R P+G+T++V + S E+ F E+ + S+ H+N++R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 825 LLGWGSNKNLKLLFYDYLPNGSL-SSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCM 883
L G +K++ + P GSL L G +RY V VA + YL
Sbjct: 76 LYGVVLTPPMKMV-TELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK-- 130
Query: 884 PPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEH 943
+H D+ A N+LL + DFGL R + + D + +++ A + APE
Sbjct: 131 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA----WCAPES 185
Query: 944 ASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
+ + SD + FGV L E+ T G+ P
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 94/217 (43%), Gaps = 27/217 (12%)
Query: 773 VIGTGSSG-VVYRVTIPNGETLAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLG-WG 829
V+G G+ G VV + A+KK+ ++E SE+ L S+ H+ +VR W
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 830 SNKNL----------KLLF--YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAY 877
+N LF +Y NG+L L+H E + + + AL+Y
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY-WRLFRQILEALSY 131
Query: 878 LHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGD----DNCSKTNQRPQLA 933
+H I+H D+K MN+ + + DFGLA+ V S D D+ + L
Sbjct: 132 IHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLT 188
Query: 934 GSYG---YMAPEHAS-MQRITEKSDVYSFGVVLLEVL 966
+ G Y+A E EK D+YS G++ E++
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 21/209 (10%)
Query: 774 IGTGSSGVVYR--VTIPNGETLAVK------KMWSSDES-GAFSSEIQTLGSIRHKNIVR 824
+G GS GVV R P+G+T++V + S E+ F E+ + S+ H+N++R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 825 LLGWGSNKNLKLLFYDYLPNGSL-SSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCM 883
L G +K++ + P GSL L G +RY V VA + YL
Sbjct: 86 LYGVVLTPPMKMV-TELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK-- 140
Query: 884 PPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEH 943
+H D+ A N+LL + DFGL R + + D + +++ A + APE
Sbjct: 141 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFA----WCAPES 195
Query: 944 ASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
+ + SD + FGV L E+ T G+ P
Sbjct: 196 LKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 83/202 (41%), Gaps = 18/202 (8%)
Query: 772 NVIGTGSSGVVYR--VTIPNGETLAV-----KKMWSSDESGAFSSEIQTLGSIRHKNIVR 824
IG G G V++ P +AV K S F E T+ H +IV+
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 825 LLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
L+G +N + + G L S L K D + ++ ALAYL
Sbjct: 76 LIG-VITENPVWIIMELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTALAYLESK--- 130
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+H D+ A NVL+ L DFGL+R + S SK +MAPE
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL------PIKWMAPESI 184
Query: 945 SMQRITEKSDVYSFGVVLLEVL 966
+ +R T SDV+ FGV + E+L
Sbjct: 185 NFRRFTSASDVWMFGVCMWEIL 206
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 83/202 (41%), Gaps = 18/202 (8%)
Query: 772 NVIGTGSSGVVYR--VTIPNGETLAV-----KKMWSSDESGAFSSEIQTLGSIRHKNIVR 824
IG G G V++ P +AV K S F E T+ H +IV+
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 825 LLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
L+G +N + + G L S L K D + ++ ALAYL
Sbjct: 76 LIG-VITENPVWIIMELCTLGELRSFLQ-VRKFSLDLASLILYAYQLSTALAYLESK--- 130
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+H D+ A NVL+ L DFGL+R + S SK +MAPE
Sbjct: 131 RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL------PIKWMAPESI 184
Query: 945 SMQRITEKSDVYSFGVVLLEVL 966
+ +R T SDV+ FGV + E+L
Sbjct: 185 NFRRFTSASDVWMFGVCMWEIL 206
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 18/171 (10%)
Query: 808 SSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARY-- 865
S EI S+ H+++V G+ + + + + SL L H K + EARY
Sbjct: 63 SMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYL 121
Query: 866 -EVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
++VLG YLH + ++H D+K N+ L + + DFGLA V G+
Sbjct: 122 RQIVLGCQ----YLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---- 170
Query: 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975
++ L G+ Y+APE S + + + DV+S G ++ +L G+ P + +
Sbjct: 171 ---RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 218
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 17/211 (8%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSIRH 819
+ N IG G+ GVVY+ GE +A+KK+ E+ S EI L + H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
NIV+LL +N L +++L + L + + G + + LA+ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+LH D+K N+L+ LADFGLAR + Y
Sbjct: 121 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWYR 170
Query: 940 APE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
APE + + D++S G + E++T R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 17/211 (8%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSIRH 819
+ N IG G+ GVVY+ GE +A+KK+ E+ S EI L + H
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
NIV+LL +N L +++L + L + + G + + LA+ H
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+LH D+K N+L+ LADFGLAR + Y
Sbjct: 125 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWYR 174
Query: 940 APE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
APE + + D++S G + E++T R
Sbjct: 175 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 17/211 (8%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSIRH 819
+ N IG G+ GVVY+ GE +A+KK+ E+ S EI L + H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
NIV+LL +N L +++L + L + + G + + LA+ H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+LH D+K N+L+ LADFGLAR + Y
Sbjct: 124 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWYR 173
Query: 940 APE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
APE + + D++S G + E++T R
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 17/211 (8%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSIRH 819
+ N IG G+ GVVY+ GE +A+KK+ E+ S EI L + H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
NIV+LL +N L +++L + L + + G + + LA+ H
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+LH D+K N+L+ LADFGLAR + Y
Sbjct: 123 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWYR 172
Query: 940 APE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
APE + + D++S G + E++T R
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 21/209 (10%)
Query: 774 IGTGSSGVVYR--VTIPNGETLAVK------KMWSSDES-GAFSSEIQTLGSIRHKNIVR 824
+G GS GVV R P+G+T++V + S E+ F E+ + S+ H+N++R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 825 LLGWGSNKNLKLLFYDYLPNGSL-SSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCM 883
L G +K++ + P GSL L G +RY V VA + YL
Sbjct: 80 LYGVVLTPPMKMV-TELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK-- 134
Query: 884 PPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEH 943
+H D+ A N+LL + DFGL R + + D + +++ A + APE
Sbjct: 135 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA----WCAPES 189
Query: 944 ASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
+ + SD + FGV L E+ T G+ P
Sbjct: 190 LKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 773 VIGTGSSGVVYRVTIPNGE----TLAVK---KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
VIG G G VY T+ + + AVK ++ E F +E + H N++ L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 826 LGWG-SNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
LG ++ L+ Y+ +G L + + + L VA + YL
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL---ASK 151
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+H D+ A N +L + +ADFGLAR + D + + +MA E
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLARDMY---DKEXXSVHNKTGAKLPVKWMALESL 208
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974
Q+ T KSDV+SFGV+L E++T P P
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMTRGAPPYP 238
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 18/171 (10%)
Query: 808 SSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARY-- 865
S EI S+ H+++V G+ + + + + SL L H K + EARY
Sbjct: 87 SMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYL 145
Query: 866 -EVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
++VLG YLH + ++H D+K N+ L + + DFGLA V G+
Sbjct: 146 RQIVLGCQ----YLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---- 194
Query: 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975
++ L G+ Y+APE S + + + DV+S G ++ +L G+ P + +
Sbjct: 195 ---RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 242
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 17/211 (8%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSIRH 819
+ N IG G+ GVVY+ GE +A+KK+ E+ S EI L + H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
NIV+LL +N L +++L + L + + G + + LA+ H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+LH D+K N+L+ LADFGLAR + Y
Sbjct: 120 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWYR 169
Query: 940 APE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
APE + + D++S G + E++T R
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 17/211 (8%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSIRH 819
+ N IG G+ GVVY+ GE +A+KK+ E+ S EI L + H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
NIV+LL +N L +++L + L + + G + + LA+ H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+LH D+K N+L+ LADFGLAR + Y
Sbjct: 120 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWYR 169
Query: 940 APE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
APE + + D++S G + E++T R
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 17/211 (8%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSIRH 819
+ N IG G+ GVVY+ GE +A+KK+ E+ S EI L + H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
NIV+LL +N L +++L + L + + G + + LA+ H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+LH D+K N+L+ LADFGLAR + Y
Sbjct: 124 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWYR 173
Query: 940 APE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
APE + + D++S G + E++T R
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 83/199 (41%), Gaps = 27/199 (13%)
Query: 788 PNGETLAVKKMWSSDESGA----FSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYL 842
PN T KM SD + SE++ + I +HKNI+ LLG + + +Y
Sbjct: 98 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 157
Query: 843 PNGSLSSLLHGAGKGGADWEAR--------------YEVVLGVAHALAYLHHDCMPPILH 888
G+L L G ++ VA + YL +H
Sbjct: 158 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIH 214
Query: 889 GDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQR 948
D+ A NVL+ +ADFGLAR + D TN R + +MAPE +
Sbjct: 215 RDLAARNVLVTEDNVMKIADFGLARDIHHI-DYYKKTTNGRLPVK----WMAPEALFDRI 269
Query: 949 ITEKSDVYSFGVVLLEVLT 967
T +SDV+SFGV+L E+ T
Sbjct: 270 YTHQSDVWSFGVLLWEIFT 288
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 17/211 (8%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSIRH 819
+ N IG G+ GVVY+ GE +A+KK+ E+ S EI L + H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
NIV+LL +N L +++L + L + + G + + LA+ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+LH D+K N+L+ LADFGLAR + Y
Sbjct: 121 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWYR 170
Query: 940 APE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
APE + + D++S G + E++T R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 17/211 (8%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSIRH 819
+ N IG G+ GVVY+ GE +A+KK+ E+ S EI L + H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
NIV+LL +N L +++L + L + + G + + LA+ H
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+LH D+K N+L+ LADFGLAR + Y
Sbjct: 123 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWYR 172
Query: 940 APE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
APE + + D++S G + E++T R
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 21/209 (10%)
Query: 774 IGTGSSGVVYR--VTIPNGETLAVK------KMWSSDES-GAFSSEIQTLGSIRHKNIVR 824
+G GS GVV R P+G+T++V + S E+ F E+ + S+ H+N++R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 825 LLGWGSNKNLKLLFYDYLPNGSL-SSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCM 883
L G +K++ + P GSL L G +RY V VA + YL
Sbjct: 86 LYGVVLTPPMKMV-TELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK-- 140
Query: 884 PPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEH 943
+H D+ A N+LL + DFGL R + + D + +++ A + APE
Sbjct: 141 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA----WCAPES 195
Query: 944 ASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
+ + SD + FGV L E+ T G+ P
Sbjct: 196 LKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 774 IGTGSSGVVYRV-TIPNGETLAVKKMWSS-----DESGAFSSEIQTLGSIRHKNIVRLLG 827
+GTGS G V+ + + NG A+K + + + E L + H I+R+
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRM-- 71
Query: 828 WGSNKNLKLLFY--DYLPNGSLSSLLHGAGKGGADWEARY--EVVLGVAHALAYLHHDCM 883
WG+ ++ + +F DY+ G L SLL + + Y EV L AL YLH
Sbjct: 72 WGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCL----ALEYLHSK-- 125
Query: 884 PPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEH 943
I++ D+K N+LL + DFG A+ V + L G+ Y+APE
Sbjct: 126 -DIIYRDLKPENILLDKNGHIKITDFGFAKYVP----------DVTYXLCGTPDYIAPEV 174
Query: 944 ASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
S + + D +SFG+++ E+L G P
Sbjct: 175 VSTKPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 17/211 (8%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSIRH 819
+ N IG G+ GVVY+ GE +A+KK+ E+ S EI L + H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
NIV+LL +N L +++L + L + + G + + LA+ H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+LH D+K N+L+ LADFGLAR + Y
Sbjct: 122 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWYR 171
Query: 940 APE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
APE + + D++S G + E++T R
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 17/211 (8%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSIRH 819
+ N IG G+ GVVY+ GE +A+KK+ E+ S EI L + H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
NIV+LL +N L +++L + L + + G + + LA+ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+LH D+K N+L+ LADFGLAR + Y
Sbjct: 121 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWYR 170
Query: 940 APE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
APE + + D++S G + E++T R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 90/219 (41%), Gaps = 25/219 (11%)
Query: 766 RNLTSANVIGTGSSGVVYRVTI------PNGETLAVK---KMWSSDESGAFSSEIQTLGS 816
+N+T +G G+ G VY + P+ +AVK +++S + F E +
Sbjct: 45 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISK 104
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEA-----RYEVVLGV 871
H+NIVR +G + + + + G L S L + + V +
Sbjct: 105 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 164
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLL---GPGYQAYLADFGLARIVSGSGDDNCSKTNQ 928
A YL + +H D+ A N LL GPG A + DFG+AR + +
Sbjct: 165 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 221
Query: 929 RPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
P +M PE T K+D +SFGV+L E+ +
Sbjct: 222 LP-----VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 17/211 (8%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSIRH 819
+ N IG G+ GVVY+ GE +A+ K+ E+ S EI L + H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
NIV+LL +N L +++L + L + + G + + LA+ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+LH D+K N+L+ LADFGLAR G + T++ + Y
Sbjct: 121 SHR---VLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHE----VVTLWYR 170
Query: 940 APE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
APE + + D++S G + E++T R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 17/211 (8%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSIRH 819
+ N IG G+ GVVY+ GE +A+KK+ E+ S EI L + H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
NIV+LL +N L +++L + L + + G + + LA+ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+LH D+K N+L+ LADFGLAR + Y
Sbjct: 121 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWYR 170
Query: 940 APE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
APE + + D++S G + E++T R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 17/211 (8%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSIRH 819
+ N IG G+ GVVY+ GE +A+ K+ E+ S EI L + H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
NIV+LL +N L +++L + L + + G + + LA+ H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+LH D+K N+L+ LADFGLAR G + T++ + Y
Sbjct: 120 SHR---VLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHE----VVTLWYR 169
Query: 940 APE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
APE + + D++S G + E++T R
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 18/213 (8%)
Query: 766 RNLTSANVIGTGSSGVVYRVTIPNGETLAVKKM----WSSDESGAFSSEIQTLGSIRHKN 821
++LT +GTG GVV +A+K + S DE F E + + ++ H+
Sbjct: 24 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE---FIEEAKVMMNLSHEK 80
Query: 822 IVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHD 881
+V+L G + + + +Y+ NG L + L + + E+ V A+ YL
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLES- 138
Query: 882 CMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAP 941
LH D+ A N L+ ++DFGL+R V D+ S + + S P
Sbjct: 139 --KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD--DEETSSVGSKFPVRWS----PP 190
Query: 942 EHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
E + + KSD+++FGV++ E+ + G+ P +
Sbjct: 191 EVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 773 VIGTGSSGVVYRVTIPNGE----TLAVK---KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
VIG G G VY T+ + + AVK ++ E F +E + H N++ L
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 826 LGWG-SNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
LG ++ L+ Y+ +G L + + + L VA + YL
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL---ASK 171
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+H D+ A N +L + +ADFGLAR + D + + +MA E
Sbjct: 172 KFVHRDLAARNCMLDEKFTVKVADFGLARDMY---DKEYYSVHNKTGAKLPVKWMALESL 228
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974
Q+ T KSDV+SFGV+L E++T P P
Sbjct: 229 QTQKFTTKSDVWSFGVLLWELMTRGAPPYP 258
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 17/211 (8%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSIRH 819
+ N IG G+ GVVY+ GE +A+KK+ E+ S EI L + H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
NIV+LL +N L +++L + L + + G + + LA+ H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+LH D+K N+L+ LADFGLAR + Y
Sbjct: 122 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWYR 171
Query: 940 APE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
APE + + D++S G + E++T R
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 95/219 (43%), Gaps = 30/219 (13%)
Query: 772 NVIGTGSSGVV----YRVTIPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNI 822
+ +G G+ G V + +T G +AVK K+ S D G EIQ L RH +I
Sbjct: 22 DTLGVGTFGKVKVGKHELT---GHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHI 78
Query: 823 VRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDC 882
++L S + + +Y+ G L + G D + + + + Y H
Sbjct: 79 IKLYQVISTPSDIFMVMEYVSGGELFDYI--CKNGRLDEKESRRLFQQILSGVDYCHRHM 136
Query: 883 MPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPE 942
++H D+K NVLL A +ADFGL+ ++S S GS Y APE
Sbjct: 137 ---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXS--------CGSPNYAAPE 185
Query: 943 HASMQRIT-EKSDVYSFGVVLLEVLTGRHPLD----PTL 976
S + + D++S GV+L +L G P D PTL
Sbjct: 186 VISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTL 224
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 59.7 bits (143), Expect = 8e-09, Method: Composition-based stats.
Identities = 55/234 (23%), Positives = 105/234 (44%), Gaps = 27/234 (11%)
Query: 760 SIDDVVRNLTSANVI-----GTGSSGVVYRVTI----PNGETL--AVKKMWSSDESGA-- 806
++D V+++ N++ G G+ G V+ P + + AVK + + ++
Sbjct: 2 AMDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKD 61
Query: 807 FSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAG-------KGGA 859
F E + L +++H++IV+ G + ++ ++Y+ +G L+ L G +G
Sbjct: 62 FHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNP 121
Query: 860 DWEARYEVVLGVAHALAY-LHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGS 918
E +L +A +A + + +H D+ N L+G + DFG++R V +
Sbjct: 122 PTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYST 181
Query: 919 GDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
P +M PE ++ T +SDV+S GVVL E+ T G+ P
Sbjct: 182 DYYRVGGHTMLP-----IRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 773 VIGTGSSGVVYRVTIPNGE----TLAVK---KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
VIG G G VY T+ + + AVK ++ E F +E + H N++ L
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 826 LGWG-SNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
LG ++ L+ Y+ +G L + + + L VA + YL
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT-VKDLIGFGLQVAKGMKYL---ASK 170
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+H D+ A N +L + +ADFGLAR + D + + +MA E
Sbjct: 171 KFVHRDLAARNCMLDEKFTVKVADFGLARDMY---DKEYYSVHNKTGAKLPVKWMALESL 227
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974
Q+ T KSDV+SFGV+L E++T P P
Sbjct: 228 QTQKFTTKSDVWSFGVLLWELMTRGAPPYP 257
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 88/191 (46%), Gaps = 20/191 (10%)
Query: 792 TLAVKKMWSSDESGAFS---SEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPNGSL 847
T+AVK + S SE++ + I +HKNI+ LLG + + +Y G+L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 848 SSLLHGAGKGGADW----------EARYEVVLGVAHALAY-LHHDCMPPILHGDVKAMNV 896
L G ++ + ++ ++ + LA + + +H D+ A NV
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 188
Query: 897 LLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVY 956
L+ +ADFGLAR ++ D TN R + +MAPE + T +SDV+
Sbjct: 189 LVTENNVMKIADFGLARDINNI-DXXKKTTNGRLPVK----WMAPEALFDRVYTHQSDVW 243
Query: 957 SFGVVLLEVLT 967
SFGV++ E+ T
Sbjct: 244 SFGVLMWEIFT 254
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 17/211 (8%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSIRH 819
+ N IG G+ GVVY+ GE +A+KK+ E+ S EI L + H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
NIV+LL +N L +++L + L + + G + + LA+ H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+LH D+K N+L+ LADFGLAR + Y
Sbjct: 124 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWYR 173
Query: 940 APE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
APE + + D++S G + E++T R
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 773 VIGTGSSGVVYRVTIPNGE----TLAVK---KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
VIG G G VY T+ + + AVK ++ E F +E + H N++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 826 LGWG-SNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
LG ++ L+ Y+ +G L + + + L VA + YL
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL---ASK 152
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+H D+ A N +L + +ADFGLAR + D + + +MA E
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMY---DKEYYSVHNKTGAKLPVKWMALESL 209
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974
Q+ T KSDV+SFGV+L E++T P P
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 59.7 bits (143), Expect = 9e-09, Method: Composition-based stats.
Identities = 60/222 (27%), Positives = 96/222 (43%), Gaps = 32/222 (14%)
Query: 774 IGTGSSGVVYRV-TIPNGETLAVKKMWSSDESGAFSS----EIQTLGSIRHKNIVRLLGW 828
IG GS GVV++ G+ +A+KK S++ EI+ L ++H N+V LL
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 829 GSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH-HDCMPPIL 887
K L ++Y + L L + G + A+ + H H+C +
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHEL--DRYQRGVPEHLVKSITWQTLQAVNFCHKHNC----I 124
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSG----DDNCSKTNQRPQ-LAGSYGYMAPE 942
H DVK N+L+ L DFG AR+++G D+ ++ + P+ L G Y P
Sbjct: 125 HRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPP- 183
Query: 943 HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQ 984
DV++ G V E+L+G P PG + + Q
Sbjct: 184 ----------VDVWAIGCVFAELLSGV----PLWPGKSDVDQ 211
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 17/211 (8%)
Query: 773 VIGTGSSGVVYRVTIPNGE----TLAVK---KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
VIG G G VY T+ + + AVK ++ E F +E + H N++ L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 826 LGWG-SNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
LG ++ L+ Y+ +G L + + + L VA + +L
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT-VKDLIGFGLQVAKGMKFL---ASK 153
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLAR-IVSGSGDDNCSKTNQRPQLAGSYGYMAPEH 943
+H D+ A N +L + +ADFGLAR ++ D +KT + + +MA E
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVK----WMALES 209
Query: 944 ASMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974
Q+ T KSDV+SFGV+L E++T P P
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 240
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 17/211 (8%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSIRH 819
+ N IG G+ GVVY+ GE +A+KK+ E+ S EI L + H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
NIV+LL +N L +++L + L + + G + + LA+ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+LH D+K N+L+ LADFGLAR + Y
Sbjct: 121 SHR---VLHRDLKPENLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWYR 170
Query: 940 APE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
APE + + D++S G + E++T R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 83/199 (41%), Gaps = 27/199 (13%)
Query: 788 PNGETLAVKKMWSSDESGA----FSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYL 842
PN T KM SD + SE++ + I +HKNI+ LLG + + +Y
Sbjct: 49 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 108
Query: 843 PNGSLSSLLHGAGKGGADWEAR--------------YEVVLGVAHALAYLHHDCMPPILH 888
G+L L G ++ VA + YL +H
Sbjct: 109 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIH 165
Query: 889 GDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQR 948
D+ A NVL+ +ADFGLAR + D TN R + +MAPE +
Sbjct: 166 RDLAARNVLVTEDNVMKIADFGLARDIHHI-DYYKKTTNGRLPVK----WMAPEALFDRI 220
Query: 949 ITEKSDVYSFGVVLLEVLT 967
T +SDV+SFGV+L E+ T
Sbjct: 221 YTHQSDVWSFGVLLWEIFT 239
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 17/211 (8%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSIRH 819
+ N IG G+ GVVY+ GE +A+KK+ E+ S EI L + H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
NIV+LL +N L +++L + L + + G + + LA+ H
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+LH D+K N+L+ LADFGLAR + Y
Sbjct: 123 SHR---VLHRDLKPENLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWYR 172
Query: 940 APE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
APE + + D++S G + E++T R
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 773 VIGTGSSGVVYRVTIPNGE----TLAVK---KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
VIG G G VY T+ + + AVK ++ E F +E + H N++ L
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 826 LGWG-SNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
LG ++ L+ Y+ +G L + + + L VA + YL
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL---ASK 144
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+H D+ A N +L + +ADFGLAR + D + + +MA E
Sbjct: 145 KFVHRDLAARNCMLDEKFTVKVADFGLARDMY---DKEYYSVHNKTGAKLPVKWMALESL 201
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974
Q+ T KSDV+SFGV+L E++T P P
Sbjct: 202 QTQKFTTKSDVWSFGVLLWELMTRGAPPYP 231
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 83/199 (41%), Gaps = 27/199 (13%)
Query: 788 PNGETLAVKKMWSSDESGA----FSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYL 842
PN T KM SD + SE++ + I +HKNI+ LLG + + +Y
Sbjct: 46 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 105
Query: 843 PNGSLSSLLHGAGKGGADWEAR--------------YEVVLGVAHALAYLHHDCMPPILH 888
G+L L G ++ VA + YL +H
Sbjct: 106 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIH 162
Query: 889 GDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQR 948
D+ A NVL+ +ADFGLAR + D TN R + +MAPE +
Sbjct: 163 RDLAARNVLVTEDNVMKIADFGLARDIHHI-DYYKKTTNGRLPVK----WMAPEALFDRI 217
Query: 949 ITEKSDVYSFGVVLLEVLT 967
T +SDV+SFGV+L E+ T
Sbjct: 218 YTHQSDVWSFGVLLWEIFT 236
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 773 VIGTGSSGVVYRVTIPNGE----TLAVK---KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
VIG G G VY T+ + + AVK ++ E F +E + H N++ L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 826 LGWG-SNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
LG ++ L+ Y+ +G L + + + L VA + YL
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL---ASK 150
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+H D+ A N +L + +ADFGLAR + D + + +MA E
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLARDMY---DKEYYSVHNKTGAKLPVKWMALESL 207
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974
Q+ T KSDV+SFGV+L E++T P P
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMTRGAPPYP 237
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 773 VIGTGSSGVVYRVTIPNGE----TLAVK---KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
VIG G G VY T+ + + AVK ++ E F +E + H N++ L
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 826 LGWG-SNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
LG ++ L+ Y+ +G L + + + L VA + YL
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL---ASK 149
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+H D+ A N +L + +ADFGLAR + D + + +MA E
Sbjct: 150 KFVHRDLAARNCMLDEKFTVKVADFGLARDMY---DKEYYSVHNKTGAKLPVKWMALESL 206
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974
Q+ T KSDV+SFGV+L E++T P P
Sbjct: 207 QTQKFTTKSDVWSFGVLLWELMTRGAPPYP 236
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 17/211 (8%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSIRH 819
+ N IG G+ GVVY+ GE +A+KK+ E+ S EI L + H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
NIV+LL +N L +++L + L + + G + + LA+ H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+LH D+K N+L+ LADFGLAR + Y
Sbjct: 122 SHR---VLHRDLKPENLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWYR 171
Query: 940 APE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
APE + + D++S G + E++T R
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 83/199 (41%), Gaps = 27/199 (13%)
Query: 788 PNGETLAVKKMWSSDESGA----FSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYL 842
PN T KM SD + SE++ + I +HKNI+ LLG + + +Y
Sbjct: 57 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 116
Query: 843 PNGSLSSLLHGAGKGGADWEAR--------------YEVVLGVAHALAYLHHDCMPPILH 888
G+L L G ++ VA + YL +H
Sbjct: 117 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIH 173
Query: 889 GDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQR 948
D+ A NVL+ +ADFGLAR + D TN R + +MAPE +
Sbjct: 174 RDLAARNVLVTEDNVMKIADFGLARDIHHI-DYYKKTTNGRLPVK----WMAPEALFDRI 228
Query: 949 ITEKSDVYSFGVVLLEVLT 967
T +SDV+SFGV+L E+ T
Sbjct: 229 YTHQSDVWSFGVLLWEIFT 247
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 96/230 (41%), Gaps = 33/230 (14%)
Query: 766 RNLTSANVIGTGSSGVVYRVTIPN-----GETLAVKKMWSSDESGA----FSSEIQTLGS 816
+NL +G G G V + T + G T KM + S + SE L
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGA--------------DWE 862
+ H ++++L G S LL +Y GSL L + K G D
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 863 ARYEVVLGVAHALAY-----LHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSG 917
+ +G + A+ + + ++H D+ A N+L+ G + ++DFGL+R V
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVY- 201
Query: 918 SGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
D ++ R + +MA E T +SDV+SFGV+L E++T
Sbjct: 202 EEDSXVKRSQGRIPVK----WMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 17/211 (8%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSIRH 819
+ N IG G+ GVVY+ GE +A+KK+ E+ S EI L + H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
NIV+LL +N L +++L + L + + G + + LA+ H
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+LH D+K N+L+ LADFGLAR + Y
Sbjct: 123 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWYR 172
Query: 940 APE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
APE + + D++S G + E++T R
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 83/199 (41%), Gaps = 27/199 (13%)
Query: 788 PNGETLAVKKMWSSDESGA----FSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYL 842
PN T KM SD + SE++ + I +HKNI+ LLG + + +Y
Sbjct: 57 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 116
Query: 843 PNGSLSSLLHGAGKGGADWEAR--------------YEVVLGVAHALAYLHHDCMPPILH 888
G+L L G ++ VA + YL +H
Sbjct: 117 SKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIH 173
Query: 889 GDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQR 948
D+ A NVL+ +ADFGLAR + D TN R + +MAPE +
Sbjct: 174 RDLAARNVLVTEDNVMKIADFGLARDIHHI-DYYKKTTNGRLPVK----WMAPEALFDRI 228
Query: 949 ITEKSDVYSFGVVLLEVLT 967
T +SDV+SFGV+L E+ T
Sbjct: 229 YTHQSDVWSFGVLLWEIFT 247
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 97/230 (42%), Gaps = 33/230 (14%)
Query: 766 RNLTSANVIGTGSSGVVYRVTIPN-----GETLAVKKMWSSDESGA----FSSEIQTLGS 816
+NL +G G G V + T + G T KM + S + SE L
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGA--------------DWE 862
+ H ++++L G S LL +Y GSL L + K G D
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 863 ARYEVVLGVAHALAY-----LHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSG 917
+ +G + A+ + + ++H D+ A N+L+ G + ++DFGL+R V
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDV-- 200
Query: 918 SGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+D+ K R Q +MA E T +SDV+SFGV+L E++T
Sbjct: 201 YEEDSYVK---RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 14/209 (6%)
Query: 774 IGTGSSGVVYR-VTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLG-WGSN 831
+G GS G VY+ + G+ +A+K++ + EI + ++V+ G + N
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKN 96
Query: 832 KNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDV 891
+L ++ +Y GS+S ++ K + E ++ L YLH M I H D+
Sbjct: 97 TDLWIVM-EYCGAGSVSDIIRLRNKTLTEDEIA-TILQSTLKGLEYLHF--MRKI-HRDI 151
Query: 892 KAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITE 951
KA N+LL A LADFG+A G D +K N + G+ +MAPE
Sbjct: 152 KAGNILLNTEGHAKLADFGVA----GQLTDXMAKRN---XVIGTPFWMAPEVIQEIGYNC 204
Query: 952 KSDVYSFGVVLLEVLTGRHPLDPTLPGGA 980
+D++S G+ +E+ G+ P P A
Sbjct: 205 VADIWSLGITAIEMAEGKPPYADIHPMRA 233
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 773 VIGTGSSGVVYRVTIPNGE----TLAVK---KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
VIG G G VY T+ + + AVK ++ E F +E + H N++ L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 826 LGWG-SNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
LG ++ L+ Y+ +G L + + + L VA + YL
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL---ASK 151
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+H D+ A N +L + +ADFGLAR + D + + +MA E
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLARDMY---DKEYYSVHNKTGAKLPVKWMALESL 208
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974
Q+ T KSDV+SFGV+L E++T P P
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMTRGAPPYP 238
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 773 VIGTGSSGVVYRVTIPNGE----TLAVK---KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
VIG G G VY T+ + + AVK ++ E F +E + H N++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 826 LGWG-SNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
LG ++ L+ Y+ +G L + + + L VA + YL
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL---ASK 152
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+H D+ A N +L + +ADFGLAR + D + + +MA E
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMY---DKEYYSVHNKTGAKLPVKWMALESL 209
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974
Q+ T KSDV+SFGV+L E++T P P
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 84/200 (42%), Gaps = 18/200 (9%)
Query: 774 IGTGSSGVVYR--VTIPNGETLAV-----KKMWSSDESGAFSSEIQTLGSIRHKNIVRLL 826
IG G G V++ P +AV K S F E T+ H +IV+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 827 GWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPI 886
G + +N + + G L S L K D + ++ ALAYL
Sbjct: 458 GVIT-ENPVWIIMELCTLGELRSFLQ-VRKFSLDLASLILYAYQLSTALAYLESK---RF 512
Query: 887 LHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM 946
+H D+ A NVL+ L DFGL+R + S SK +MAPE +
Sbjct: 513 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL------PIKWMAPESINF 566
Query: 947 QRITEKSDVYSFGVVLLEVL 966
+R T SDV+ FGV + E+L
Sbjct: 567 RRFTSASDVWMFGVCMWEIL 586
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 18/213 (8%)
Query: 766 RNLTSANVIGTGSSGVVYRVTIPNGETLAVKKM----WSSDESGAFSSEIQTLGSIRHKN 821
++LT +GTG GVV +A+K + S DE F E + + ++ H+
Sbjct: 24 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE---FIEEAKVMMNLSHEK 80
Query: 822 IVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHD 881
+V+L G + + + +Y+ NG L + L + + E+ V A+ YL
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLES- 138
Query: 882 CMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAP 941
LH D+ A N L+ ++DFGL+R V D+ S + + S P
Sbjct: 139 --KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD--DEYTSSVGSKFPVRWS----PP 190
Query: 942 EHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
E + + KSD+++FGV++ E+ + G+ P +
Sbjct: 191 EVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 96/230 (41%), Gaps = 33/230 (14%)
Query: 766 RNLTSANVIGTGSSGVVYRVTIPN-----GETLAVKKMWSSDESGA----FSSEIQTLGS 816
+NL +G G G V + T + G T KM + S + SE L
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGA--------------DWE 862
+ H ++++L G S LL +Y GSL L + K G D
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 863 ARYEVVLGVAHALAY-----LHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSG 917
+ +G + A+ + + ++H D+ A N+L+ G + ++DFGL+R V
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVY- 201
Query: 918 SGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
D ++ R + +MA E T +SDV+SFGV+L E++T
Sbjct: 202 EEDSXVKRSQGRIPVK----WMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 84/202 (41%), Gaps = 18/202 (8%)
Query: 772 NVIGTGSSGVVYR--VTIPNGETLAV-----KKMWSSDESGAFSSEIQTLGSIRHKNIVR 824
IG G G V++ P +AV K S F E T+ H +IV+
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 825 LLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
L+G + +N + + G L S L K D + ++ ALAYL
Sbjct: 456 LIGVIT-ENPVWIIMELCTLGELRSFLQ-VRKFSLDLASLILYAYQLSTALAYLESK--- 510
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+H D+ A NVL+ L DFGL+R + S SK +MAPE
Sbjct: 511 RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL------PIKWMAPESI 564
Query: 945 SMQRITEKSDVYSFGVVLLEVL 966
+ +R T SDV+ FGV + E+L
Sbjct: 565 NFRRFTSASDVWMFGVCMWEIL 586
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 24/209 (11%)
Query: 774 IGTGSSGVVYR-VTIPNGETLAVK----KMWSSDESGAFSSEIQTLGSIRHKNIVRLLGW 828
+G G+ VV R + IP G+ A K K S+ + E + ++H NIVRL
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 829 GSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILH 888
S + L +D + G L + ++ + + + L ++H + I+H
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDI-----VAREYYSEADASHCIQQILESVNHCHLNGIVH 126
Query: 889 GDVKAMNVLLG---PGYQAYLADFGLARIVSGSGDDNCSKTNQRPQL--AGSYGYMAPEH 943
D+K N+LL G LADFGLA V G +Q+ AG+ GY++PE
Sbjct: 127 RDLKPENLLLASKSKGAAVKLADFGLAIEVQG---------DQQAWFGFAGTPGYLSPEV 177
Query: 944 ASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
+ D+++ GV+L +L G P
Sbjct: 178 LRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 773 VIGTGSSGVVYRVTIPNGE----TLAVK---KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
VIG G G VY T+ + + AVK ++ E F +E + H N++ L
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 826 LGWG-SNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
LG ++ L+ Y+ +G L + + + L VA + YL
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL---ASK 147
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+H D+ A N +L + +ADFGLAR + D + + +MA E
Sbjct: 148 KFVHRDLAARNCMLDEKFTVKVADFGLARDMY---DKEYYSVHNKTGAKLPVKWMALESL 204
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974
Q+ T KSDV+SFGV+L E++T P P
Sbjct: 205 QTQKFTTKSDVWSFGVLLWELMTRGAPPYP 234
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 88/191 (46%), Gaps = 20/191 (10%)
Query: 792 TLAVKKMWSSDESGAFS---SEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPNGSL 847
T+AVK + S SE++ + I +HKNI+ LLG + + +Y G+L
Sbjct: 115 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 174
Query: 848 SSLLHGAGKGGADW----------EARYEVVLGVAHALAY-LHHDCMPPILHGDVKAMNV 896
L G ++ + ++ ++ + LA + + +H D+ A NV
Sbjct: 175 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 234
Query: 897 LLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVY 956
L+ +ADFGLAR ++ D TN R + +MAPE + T +SDV+
Sbjct: 235 LVTENNVMKIADFGLARDINNI-DYYKKTTNGRLPVK----WMAPEALFDRVYTHQSDVW 289
Query: 957 SFGVVLLEVLT 967
SFGV++ E+ T
Sbjct: 290 SFGVLMWEIFT 300
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 17/211 (8%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSIRH 819
+ N IG G+ GVVY+ GE +A+KK+ E+ S EI L + H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
NIV+LL +N L +++L + L + + G + + LA+ H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+LH D+K N+L+ LADFGLAR + Y
Sbjct: 124 SHR---VLHRDLKPENLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWYR 173
Query: 940 APE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
APE + + D++S G + E++T R
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 90/219 (41%), Gaps = 25/219 (11%)
Query: 766 RNLTSANVIGTGSSGVVYRVTI------PNGETLAVK---KMWSSDESGAFSSEIQTLGS 816
+N+T +G G+ G VY + P+ +AVK ++ S + F E +
Sbjct: 45 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 104
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR-----YEVVLGV 871
+ H+NIVR +G + + + + G L S L + + V +
Sbjct: 105 LNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 164
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLL---GPGYQAYLADFGLARIVSGSGDDNCSKTNQ 928
A YL + +H D+ A N LL GPG A + DFG+AR + +
Sbjct: 165 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 221
Query: 929 RPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
P +M PE T K+D +SFGV+L E+ +
Sbjct: 222 LP-----VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 89/219 (40%), Gaps = 25/219 (11%)
Query: 766 RNLTSANVIGTGSSGVVYRVTI------PNGETLAVK---KMWSSDESGAFSSEIQTLGS 816
+N+T +G G+ G VY + P+ +AVK ++ S + F E +
Sbjct: 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR-----YEVVLGV 871
H+NIVR +G + + + + G L S L + + V +
Sbjct: 90 FNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 149
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLL---GPGYQAYLADFGLARIVSGSGDDNCSKTNQ 928
A YL + +H D+ A N LL GPG A + DFG+AR + +
Sbjct: 150 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 206
Query: 929 RPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
P +M PE T K+D +SFGV+L E+ +
Sbjct: 207 LP-----VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 90/219 (41%), Gaps = 25/219 (11%)
Query: 766 RNLTSANVIGTGSSGVVYRVTI------PNGETLAVK---KMWSSDESGAFSSEIQTLGS 816
+N+T +G G+ G VY + P+ +AVK ++ S + F E +
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR-----YEVVLGV 871
+ H+NIVR +G + + + + G L S L + + V +
Sbjct: 91 LNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 150
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLL---GPGYQAYLADFGLARIVSGSGDDNCSKTNQ 928
A YL + +H D+ A N LL GPG A + DFG+AR + +
Sbjct: 151 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 207
Query: 929 RPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
P +M PE T K+D +SFGV+L E+ +
Sbjct: 208 LP-----VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 86/197 (43%), Gaps = 32/197 (16%)
Query: 792 TLAVKKMWSSDESGAFS---SEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPNGSL 847
T+AVK + S SE++ + I +HKNI+ LLG + + +Y G+L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 848 SSLLHGAGKGGADWEARYEV----------------VLGVAHALAYL-HHDCMPPILHGD 890
L G E Y++ +A + YL C +H D
Sbjct: 129 REYLRARRPPGM--EXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC----IHRD 182
Query: 891 VKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRIT 950
+ A NVL+ +ADFGLAR ++ D TN R + +MAPE + T
Sbjct: 183 LAARNVLVTENNVMKIADFGLARDINNI-DXXKKTTNGRLPVK----WMAPEALFDRVYT 237
Query: 951 EKSDVYSFGVVLLEVLT 967
+SDV+SFGV++ E+ T
Sbjct: 238 HQSDVWSFGVLMWEIFT 254
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 773 VIGTGSSGVVYRVTIPNGE----TLAVK---KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
VIG G G VY T+ + + AVK ++ E F +E + H N++ L
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 826 LGWG-SNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
LG ++ L+ Y+ +G L + + + L VA + +L
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDLIGFGLQVAKGMKFL---ASK 211
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLAR-IVSGSGDDNCSKTNQRPQLAGSYGYMAPEH 943
+H D+ A N +L + +ADFGLAR + D +KT + + +MA E
Sbjct: 212 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK----WMALES 267
Query: 944 ASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976
Q+ T KSDV+SFGV+L E++T P P +
Sbjct: 268 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 300
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Query: 773 VIGTGSSGVVYRVTIPNGE----TLAVK---KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
VIG G G VY T+ + + AVK ++ E F +E + H N++ L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 826 LGWG-SNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
LG ++ L+ Y+ +G L + + + L VA + +L
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT-VKDLIGFGLQVAKGMKFL---ASK 150
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLAR-IVSGSGDDNCSKTNQRPQLAGSYGYMAPEH 943
+H D+ A N +L + +ADFGLAR + D +KT + + +MA E
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK----WMALES 206
Query: 944 ASMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974
Q+ T KSDV+SFGV+L E++T P P
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 237
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Query: 773 VIGTGSSGVVYRVTIPNGE----TLAVK---KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
VIG G G VY T+ + + AVK ++ E F +E + H N++ L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 826 LGWG-SNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
LG ++ L+ Y+ +G L + + + L VA + +L
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT-VKDLIGFGLQVAKGMKFL---ASK 153
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLAR-IVSGSGDDNCSKTNQRPQLAGSYGYMAPEH 943
+H D+ A N +L + +ADFGLAR + D +KT + + +MA E
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK----WMALES 209
Query: 944 ASMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974
Q+ T KSDV+SFGV+L E++T P P
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 240
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 62/220 (28%), Positives = 95/220 (43%), Gaps = 25/220 (11%)
Query: 762 DDVVRNLTSANVIGTGSSGVVYRVTIPN--GETLAV-----KKMWSSDESGAFSSEIQTL 814
+DVV N ++G G G VY N GE + V KK + D F SE +
Sbjct: 24 EDVVLN----RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIM 79
Query: 815 GSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHA 874
++ H +IV+L+G + ++ Y P G L L K L + A
Sbjct: 80 KNLDHPHIVKLIGIIEEEPTWIIMELY-PYGELGHYLE-RNKNSLKVLTLVLYSLQICKA 137
Query: 875 LAYLHH-DCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+AYL +C +H D+ N+L+ L DFGL+R + S T +
Sbjct: 138 MAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK-- 191
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPL 972
+M+PE + +R T SDV+ F V + E+L+ G+ P
Sbjct: 192 ----WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF 227
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 62/220 (28%), Positives = 95/220 (43%), Gaps = 25/220 (11%)
Query: 762 DDVVRNLTSANVIGTGSSGVVYRVTIPN--GETLAV-----KKMWSSDESGAFSSEIQTL 814
+DVV N ++G G G VY N GE + V KK + D F SE +
Sbjct: 8 EDVVLN----RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIM 63
Query: 815 GSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHA 874
++ H +IV+L+G + ++ Y P G L L K L + A
Sbjct: 64 KNLDHPHIVKLIGIIEEEPTWIIMELY-PYGELGHYLE-RNKNSLKVLTLVLYSLQICKA 121
Query: 875 LAYLHH-DCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+AYL +C +H D+ N+L+ L DFGL+R + S T +
Sbjct: 122 MAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK-- 175
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPL 972
+M+PE + +R T SDV+ F V + E+L+ G+ P
Sbjct: 176 ----WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF 211
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 62/220 (28%), Positives = 95/220 (43%), Gaps = 25/220 (11%)
Query: 762 DDVVRNLTSANVIGTGSSGVVYRVTIPN--GETLAV-----KKMWSSDESGAFSSEIQTL 814
+DVV N ++G G G VY N GE + V KK + D F SE +
Sbjct: 12 EDVVLN----RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIM 67
Query: 815 GSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHA 874
++ H +IV+L+G + ++ Y P G L L K L + A
Sbjct: 68 KNLDHPHIVKLIGIIEEEPTWIIMELY-PYGELGHYLE-RNKNSLKVLTLVLYSLQICKA 125
Query: 875 LAYLHH-DCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+AYL +C +H D+ N+L+ L DFGL+R + S T +
Sbjct: 126 MAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK-- 179
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPL 972
+M+PE + +R T SDV+ F V + E+L+ G+ P
Sbjct: 180 ----WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF 215
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 89/219 (40%), Gaps = 25/219 (11%)
Query: 766 RNLTSANVIGTGSSGVVYRVTI------PNGETLAVK---KMWSSDESGAFSSEIQTLGS 816
+N+T +G G+ G VY + P+ +AVK ++ S + F E +
Sbjct: 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR-----YEVVLGV 871
H+NIVR +G + + + + G L S L + + V +
Sbjct: 90 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 149
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLL---GPGYQAYLADFGLARIVSGSGDDNCSKTNQ 928
A YL + +H D+ A N LL GPG A + DFG+AR + +
Sbjct: 150 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 206
Query: 929 RPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
P +M PE T K+D +SFGV+L E+ +
Sbjct: 207 LP-----VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 65/229 (28%), Positives = 104/229 (45%), Gaps = 27/229 (11%)
Query: 762 DDVVRNLTSAN---VIGT-GSSGVVYRVTIPNGETLAVKKMW---SSDESGAFSSEIQTL 814
+ V R+L + +IG G G VY+ LA K+ S +E + EI L
Sbjct: 2 EHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 61
Query: 815 GSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLG-VAH 873
S H NIV+LL +N + ++ G++ +++ + E++ +VV
Sbjct: 62 ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT--ESQIQVVCKQTLD 119
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
AL YLH + I+H D+KA N+L LADFG+ S + + +R
Sbjct: 120 ALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGV------SAKNTRTXIQRRDSFI 170
Query: 934 GSYGYMAPE----HASMQRITE-KSDVYSFGVVLL---EVLTGRHPLDP 974
G+ +MAPE S R + K+DV+S G+ L+ E+ H L+P
Sbjct: 171 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNP 219
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Query: 773 VIGTGSSGVVYRVTIPNGE----TLAVK---KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
VIG G G VY T+ + + AVK ++ E F +E + H N++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 826 LGWG-SNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
LG ++ L+ Y+ +G L + + + L VA + +L
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT-VKDLIGFGLQVAKGMKFL---ASK 152
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLAR-IVSGSGDDNCSKTNQRPQLAGSYGYMAPEH 943
+H D+ A N +L + +ADFGLAR + D +KT + + +MA E
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK----WMALES 208
Query: 944 ASMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974
Q+ T KSDV+SFGV+L E++T P P
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 17/211 (8%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSIRH 819
+ N IG G+ GVVY+ GE +A+KK+ E+ S EI L + H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
NIV+LL +N L +++L + L + + G + + LA+ H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+LH D+K N+L+ LADFGLAR + Y
Sbjct: 122 SHR---VLHRDLKPENLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWYR 171
Query: 940 APE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
APE + + D++S G + E++T R
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 22/213 (10%)
Query: 774 IGTGSSGVVYR-VTIPNGETLAVKKMWSSDESGAFSS---EIQTLGSIRHKNIVRLLGWG 829
+G G+ VY+ + G +A+K++ E G S+ EI + ++H+NIVRL
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72
Query: 830 SNKNLKLLFYDYLPN---GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPI 886
+N L ++++ N + S G G + + LA+ H + I
Sbjct: 73 HTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KI 129
Query: 887 LHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM 946
LH D+K N+L+ Q L DFGLAR + S+ + Y AP+
Sbjct: 130 LHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSE-------VVTLWYRAPDVLMG 182
Query: 947 QRITEKS-DVYSFGVVLLEVLTGRHPLDPTLPG 978
R S D++S G +L E++TG+ P PG
Sbjct: 183 SRTYSTSIDIWSCGCILAEMITGK----PLFPG 211
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 89/219 (40%), Gaps = 25/219 (11%)
Query: 766 RNLTSANVIGTGSSGVVYRVTI------PNGETLAVK---KMWSSDESGAFSSEIQTLGS 816
+N+T +G G+ G VY + P+ +AVK ++ S + F E +
Sbjct: 47 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 106
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR-----YEVVLGV 871
H+NIVR +G + + + + G L S L + + V +
Sbjct: 107 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 166
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLL---GPGYQAYLADFGLARIVSGSGDDNCSKTNQ 928
A YL + +H D+ A N LL GPG A + DFG+AR + +
Sbjct: 167 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 223
Query: 929 RPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
P +M PE T K+D +SFGV+L E+ +
Sbjct: 224 LP-----VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 89/219 (40%), Gaps = 25/219 (11%)
Query: 766 RNLTSANVIGTGSSGVVYRVTI------PNGETLAVK---KMWSSDESGAFSSEIQTLGS 816
+N+T +G G+ G VY + P+ +AVK ++ S + F E +
Sbjct: 22 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 81
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR-----YEVVLGV 871
H+NIVR +G + + + + G L S L + + V +
Sbjct: 82 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 141
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLL---GPGYQAYLADFGLARIVSGSGDDNCSKTNQ 928
A YL + +H D+ A N LL GPG A + DFG+AR + +
Sbjct: 142 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 198
Query: 929 RPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
P +M PE T K+D +SFGV+L E+ +
Sbjct: 199 LP-----VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 89/207 (42%), Gaps = 20/207 (9%)
Query: 774 IGTGSSGVVYR-VTIPNGETLAVK----KMWSSDESGAFSSEIQTLGSIRHKNIVRLLGW 828
+G G+ VV R + IP G+ A K K S+ + E + ++H NIVRL
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 829 GSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILH 888
S + L +D + G L + ++ + + + L ++H + I+H
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDI-----VAREYYSEADASHCIQQILESVNHCHLNGIVH 126
Query: 889 GDVKAMNVLLG---PGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHAS 945
D+K N+LL G LADFGLA V G AG+ GY++PE
Sbjct: 127 RDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG-------FAGTPGYLSPEVLR 179
Query: 946 MQRITEKSDVYSFGVVLLEVLTGRHPL 972
+ D+++ GV+L +L G P
Sbjct: 180 KDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Query: 773 VIGTGSSGVVYRVTIPNGE----TLAVK---KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
VIG G G VY T+ + + AVK ++ E F +E + H N++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 826 LGWG-SNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
LG ++ L+ Y+ +G L + + + L VA + +L
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL---ASK 152
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLAR-IVSGSGDDNCSKTNQRPQLAGSYGYMAPEH 943
+H D+ A N +L + +ADFGLAR + D +KT + + +MA E
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK----WMALES 208
Query: 944 ASMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974
Q+ T KSDV+SFGV+L E++T P P
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Query: 773 VIGTGSSGVVYRVTIPNGE----TLAVK---KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
VIG G G VY T+ + + AVK ++ E F +E + H N++ L
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 826 LGWG-SNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
LG ++ L+ Y+ +G L + + + L VA + +L
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT-VKDLIGFGLQVAKGMKFL---ASK 157
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLAR-IVSGSGDDNCSKTNQRPQLAGSYGYMAPEH 943
+H D+ A N +L + +ADFGLAR + D +KT + + +MA E
Sbjct: 158 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK----WMALES 213
Query: 944 ASMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974
Q+ T KSDV+SFGV+L E++T P P
Sbjct: 214 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 244
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 89/219 (40%), Gaps = 25/219 (11%)
Query: 766 RNLTSANVIGTGSSGVVYRVTI------PNGETLAVK---KMWSSDESGAFSSEIQTLGS 816
+N+T +G G+ G VY + P+ +AVK ++ S + F E +
Sbjct: 45 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 104
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR-----YEVVLGV 871
H+NIVR +G + + + + G L S L + + V +
Sbjct: 105 FNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 164
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLL---GPGYQAYLADFGLARIVSGSGDDNCSKTNQ 928
A YL + +H D+ A N LL GPG A + DFG+AR + +
Sbjct: 165 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 221
Query: 929 RPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
P +M PE T K+D +SFGV+L E+ +
Sbjct: 222 LP-----VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 17/211 (8%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSIRH 819
+ N IG G+ GVVY+ GE +A+KK+ E+ S EI L + H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
NIV+LL +N L +++L + L + + G + + LA+ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+LH D+K N+L+ LADFGLAR G + T++ L Y
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTL----WYR 170
Query: 940 APE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
APE + + D++S G + E++T R
Sbjct: 171 APEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 86/205 (41%), Gaps = 13/205 (6%)
Query: 767 NLTSANVIGTGSSGVVYRVTIPNGETL-AVKKMWSS---DESGAFSSEIQTLGSIRHKNI 822
+L IG G+ G V+ + TL AVK + D F E + L H NI
Sbjct: 115 DLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNI 174
Query: 823 VRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDC 882
VRL+G + K + + + G + L G + ++V A + YL C
Sbjct: 175 VRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESKC 233
Query: 883 MPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPE 942
+H D+ A N L+ ++DFG++R + Q P + APE
Sbjct: 234 ---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVP-----VKWTAPE 285
Query: 943 HASMQRITEKSDVYSFGVVLLEVLT 967
+ R + +SDV+SFG++L E +
Sbjct: 286 ALNYGRYSSESDVWSFGILLWETFS 310
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 98/217 (45%), Gaps = 33/217 (15%)
Query: 772 NVIGTGSSGVVYRVTIPNGETLAVKKMWSSD-ESGAFSSEIQTLGSIRHKNIVRLLG--- 827
+ G G V++ + N + +AVK D +S EI + ++H+N+++ +
Sbjct: 21 EIKARGRFGCVWKAQLMN-DFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEK 79
Query: 828 WGSNKNLKL-LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDC---- 882
GSN ++L L + GSL+ L G W V ++ L+YLH D
Sbjct: 80 RGSNLEVELWLITAFHDKGSLTDYLKG---NIITWNELCHVAETMSRGLSYLHEDVPWCR 136
Query: 883 ----MPPILHGDVKAMNVLLGPGYQAYLADFGLA-RIVSGS--GDDNCSKTNQRPQLAGS 935
P I H D K+ NVLL A LADFGLA R G GD + G+
Sbjct: 137 GEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQ--------VGT 188
Query: 936 YGYMAPE----HASMQRITE-KSDVYSFGVVLLEVLT 967
YMAPE + QR + D+Y+ G+VL E+++
Sbjct: 189 RRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 89/219 (40%), Gaps = 25/219 (11%)
Query: 766 RNLTSANVIGTGSSGVVYRVTI------PNGETLAVK---KMWSSDESGAFSSEIQTLGS 816
+N+T +G G+ G VY + P+ +AVK ++ S + F E +
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR-----YEVVLGV 871
H+NIVR +G + + + + G L S L + + V +
Sbjct: 91 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 150
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLL---GPGYQAYLADFGLARIVSGSGDDNCSKTNQ 928
A YL + +H D+ A N LL GPG A + DFG+AR + +
Sbjct: 151 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 207
Query: 929 RPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
P +M PE T K+D +SFGV+L E+ +
Sbjct: 208 LP-----VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 89/219 (40%), Gaps = 25/219 (11%)
Query: 766 RNLTSANVIGTGSSGVVYRVTI------PNGETLAVK---KMWSSDESGAFSSEIQTLGS 816
+N+T +G G+ G VY + P+ +AVK ++ S + F E +
Sbjct: 37 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 96
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR-----YEVVLGV 871
H+NIVR +G + + + + G L S L + + V +
Sbjct: 97 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 156
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLL---GPGYQAYLADFGLARIVSGSGDDNCSKTNQ 928
A YL + +H D+ A N LL GPG A + DFG+AR + +
Sbjct: 157 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 213
Query: 929 RPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
P +M PE T K+D +SFGV+L E+ +
Sbjct: 214 LP-----VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 29/221 (13%)
Query: 767 NLTSANVIGTGSSGVVYR-VTIPNGETL----AVKKMWSSDESGA---FSSEIQTLGSIR 818
V+G+G+ G VY+ + IP GE + A+K++ + A E + S+
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLL--HGAGKGGA---DWEARYEVVLGVAH 873
+ ++ RLLG ++L+ +P G L + H G +W + +A
Sbjct: 80 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 132
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YL ++H D+ A NVL+ + DFGLA+++ + ++ + P
Sbjct: 133 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--- 186
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
+MA E + T +SDV+S+GV + E++T G P D
Sbjct: 187 --IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 29/221 (13%)
Query: 767 NLTSANVIGTGSSGVVYR-VTIPNGETL----AVKKMWSSDESGA---FSSEIQTLGSIR 818
V+G+G+ G VY+ + IP GE + A+K++ + A E + S+
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLL--HGAGKGGA---DWEARYEVVLGVAH 873
+ ++ RLLG ++L+ +P G L + H G +W + +A
Sbjct: 77 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 129
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YL ++H D+ A NVL+ + DFGLA+++ + ++ + P
Sbjct: 130 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--- 183
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
+MA E + T +SDV+S+GV + E++T G P D
Sbjct: 184 --IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 87/211 (41%), Gaps = 17/211 (8%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSIRH 819
+ N IG G+ GVVY+ GE +A+KK+ E+ S EI L + H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
NIV+LL +N L ++++ + L + + G + + LA+ H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+LH D+K N+L+ LADFGLAR + Y
Sbjct: 124 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWYR 173
Query: 940 APE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
APE + + D++S G + E++T R
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 29/221 (13%)
Query: 767 NLTSANVIGTGSSGVVYR-VTIPNGETL----AVKKMWSSDESGA---FSSEIQTLGSIR 818
V+G+G+ G VY+ + IP GE + A+K++ + A E + S+
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLL--HGAGKGGA---DWEARYEVVLGVAH 873
+ ++ RLLG ++L+ +P G L + H G +W + +A
Sbjct: 76 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 128
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YL ++H D+ A NVL+ + DFGLA+++ + ++ + P
Sbjct: 129 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--- 182
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
+MA E + T +SDV+S+GV + E++T G P D
Sbjct: 183 --IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 29/221 (13%)
Query: 767 NLTSANVIGTGSSGVVYR-VTIPNGETL----AVKKMWSSDESGA---FSSEIQTLGSIR 818
V+G+G+ G VY+ + IP GE + A+K++ + A E + S+
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLL--HGAGKGGA---DWEARYEVVLGVAH 873
+ ++ RLLG ++L+ +P G L + H G +W + +A
Sbjct: 78 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 130
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YL ++H D+ A NVL+ + DFGLA+++ + ++ + P
Sbjct: 131 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--- 184
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
+MA E + T +SDV+S+GV + E++T G P D
Sbjct: 185 --IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 29/221 (13%)
Query: 767 NLTSANVIGTGSSGVVYR-VTIPNGETL----AVKKMWSSDESGA---FSSEIQTLGSIR 818
V+G+G+ G VY+ + IP GE + A+K++ + A E + S+
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLL--HGAGKGGA---DWEARYEVVLGVAH 873
+ ++ RLLG ++L+ +P G L + H G +W + +A
Sbjct: 79 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 131
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YL ++H D+ A NVL+ + DFGLA+++ + ++ + P
Sbjct: 132 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--- 185
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
+MA E + T +SDV+S+GV + E++T G P D
Sbjct: 186 --IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 89/219 (40%), Gaps = 25/219 (11%)
Query: 766 RNLTSANVIGTGSSGVVYRVTI------PNGETLAVK---KMWSSDESGAFSSEIQTLGS 816
+N+T +G G+ G VY + P+ +AVK ++ S + F E +
Sbjct: 57 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 116
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR-----YEVVLGV 871
H+NIVR +G + + + + G L S L + + V +
Sbjct: 117 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 176
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLL---GPGYQAYLADFGLARIVSGSGDDNCSKTNQ 928
A YL + +H D+ A N LL GPG A + DFG+AR + +
Sbjct: 177 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 233
Query: 929 RPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
P +M PE T K+D +SFGV+L E+ +
Sbjct: 234 LP-----VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 17/211 (8%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSIRH 819
+ N IG G+ GVVY+ GE +A+KK+ E+ S EI L + H
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
NIV+LL +N L +++L + L + + G + + LA+ H
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
+LH D+K N+L+ LADFGLAR G + T++ L Y
Sbjct: 125 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTL----WYR 174
Query: 940 APE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
APE + + D++S G + E++T R
Sbjct: 175 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 29/221 (13%)
Query: 767 NLTSANVIGTGSSGVVYR-VTIPNGETL----AVKKMWSSDESGA---FSSEIQTLGSIR 818
V+G+G+ G VY+ + IP GE + A+K++ + A E + S+
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLL--HGAGKGGA---DWEARYEVVLGVAH 873
+ ++ RLLG ++L+ +P G L + H G +W + +A
Sbjct: 77 NPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAK 129
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YL ++H D+ A NVL+ + DFGLA+++ + ++ + P
Sbjct: 130 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--- 183
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
+MA E + T +SDV+S+GV + E++T G P D
Sbjct: 184 --IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 93/217 (42%), Gaps = 27/217 (12%)
Query: 773 VIGTGSSG-VVYRVTIPNGETLAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLG-WG 829
V+G G+ G VV + A+KK+ ++E SE+ L S+ H+ +VR W
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 830 SNKNL----------KLLF--YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAY 877
+N LF +Y N +L L+H E + + + AL+Y
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY-WRLFRQILEALSY 131
Query: 878 LHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGD----DNCSKTNQRPQLA 933
+H I+H D+K MN+ + + DFGLA+ V S D D+ + L
Sbjct: 132 IHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLT 188
Query: 934 GSYG---YMAPEHAS-MQRITEKSDVYSFGVVLLEVL 966
+ G Y+A E EK D+YS G++ E++
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 86/205 (41%), Gaps = 13/205 (6%)
Query: 767 NLTSANVIGTGSSGVVYRVTIPNGETL-AVKKMWSS---DESGAFSSEIQTLGSIRHKNI 822
+L IG G+ G V+ + TL AVK + D F E + L H NI
Sbjct: 115 DLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNI 174
Query: 823 VRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDC 882
VRL+G + K + + + G + L G + ++V A + YL C
Sbjct: 175 VRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESKC 233
Query: 883 MPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPE 942
+H D+ A N L+ ++DFG++R + Q P + APE
Sbjct: 234 ---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVP-----VKWTAPE 285
Query: 943 HASMQRITEKSDVYSFGVVLLEVLT 967
+ R + +SDV+SFG++L E +
Sbjct: 286 ALNYGRYSSESDVWSFGILLWETFS 310
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 65/211 (30%), Positives = 90/211 (42%), Gaps = 31/211 (14%)
Query: 788 PNGETLAVKKMWSSDES----GAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYL 842
PN T KM SD + SE++ + I +HKNI+ LLG + + +Y
Sbjct: 50 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 109
Query: 843 PNGSLSSLLHGAGKGGADWEAR--------------YEVVLGVAHALAYLHHDCMPPILH 888
G+L L G ++ VA + YL +H
Sbjct: 110 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIH 166
Query: 889 GDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQR 948
D+ A NVL+ +ADFGLAR + D TN R + +MAPE A R
Sbjct: 167 RDLAARNVLVTEDNVMKIADFGLARDIHHI-DYYKKTTNGRLPVK----WMAPE-ALFDR 220
Query: 949 I-TEKSDVYSFGVVLLEVLT-GRHPLDPTLP 977
I T +SDV+SFGV+L E+ T G P P +P
Sbjct: 221 IYTHQSDVWSFGVLLWEIFTLGGSPY-PGVP 250
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 65/211 (30%), Positives = 91/211 (43%), Gaps = 31/211 (14%)
Query: 788 PNGETLAVKKMWSSDES----GAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYL 842
PN T KM SD + SE++ + I +HKNI+ LLG + + +Y
Sbjct: 42 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 101
Query: 843 PNGSLSSLLHGAGKGGADW--------------EARYEVVLGVAHALAYLHHDCMPPILH 888
G+L L G ++ + VA + YL +H
Sbjct: 102 SKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIH 158
Query: 889 GDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQR 948
D+ A NVL+ +ADFGLAR + D TN R + +MAPE A R
Sbjct: 159 RDLAARNVLVTEDNVMKIADFGLARDIHHI-DYYKKTTNGRLPVK----WMAPE-ALFDR 212
Query: 949 I-TEKSDVYSFGVVLLEVLT-GRHPLDPTLP 977
I T +SDV+SFGV+L E+ T G P P +P
Sbjct: 213 IYTHQSDVWSFGVLLWEIFTLGGSPY-PGVP 242
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 98/221 (44%), Gaps = 29/221 (13%)
Query: 767 NLTSANVIGTGSSGVVYR-VTIPNGETLAV-------KKMWSSDESGAFSSEIQTLGSIR 818
V+G+G+ G VY+ + IP GE + + ++ S + E + S+
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLL--HGAGKGGA---DWEARYEVVLGVAH 873
+ ++ RLLG ++L+ +P G L + H G +W + +A
Sbjct: 110 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 162
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YL ++H D+ A NVL+ + DFGLA+++ + ++ + P
Sbjct: 163 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--- 216
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
+MA E + T +SDV+S+GV + E++T G P D
Sbjct: 217 --IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 29/221 (13%)
Query: 767 NLTSANVIGTGSSGVVYR-VTIPNGETL----AVKKMWSSDESGA---FSSEIQTLGSIR 818
V+G+G+ G VY+ + IP GE + A+K++ + A E + S+
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLL--HGAGKGGA---DWEARYEVVLGVAH 873
+ ++ RLLG ++L+ +P G L + H G +W + +A
Sbjct: 86 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 138
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YL ++H D+ A NVL+ + DFGLA+++ + ++ + P
Sbjct: 139 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--- 192
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
+MA E + T +SDV+S+GV + E++T G P D
Sbjct: 193 --IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 29/221 (13%)
Query: 767 NLTSANVIGTGSSGVVYR-VTIPNGETL----AVKKMWSSDESGA---FSSEIQTLGSIR 818
V+G+G+ G VY+ + IP GE + A+K++ + A E + S+
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLL--HGAGKGGA---DWEARYEVVLGVAH 873
+ ++ RLLG ++L+ +P G L + H G +W + +A
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 128
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YL ++H D+ A NVL+ + DFGLA+++ + ++ + P
Sbjct: 129 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--- 182
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
+MA E + T +SDV+S+GV + E++T G P D
Sbjct: 183 --IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 89/214 (41%), Gaps = 24/214 (11%)
Query: 773 VIGTGSSGVVYR-VTIPNGETLAVKKM-WSSDESGAFSSEIQTLGSI-RHKNIVRLLGWG 829
++G G+ G VY+ + G+ A+K M + DE EI L H+NI G
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAF 90
Query: 830 SNKNLK------LLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCM 883
KN L ++ GS++ L+ E + + L++LH
Sbjct: 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH-- 148
Query: 884 PPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEH 943
++H D+K NVLL + L DFG VS D + N G+ +MAPE
Sbjct: 149 -KVIHRDIKGQNVLLTENAEVKLVDFG----VSAQLDRTVGRRN---TFIGTPYWMAPEV 200
Query: 944 ASMQRITE-----KSDVYSFGVVLLEVLTGRHPL 972
+ + KSD++S G+ +E+ G PL
Sbjct: 201 IACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 29/221 (13%)
Query: 767 NLTSANVIGTGSSGVVYR-VTIPNGETL----AVKKMWSSDESGA---FSSEIQTLGSIR 818
V+G+G+ G VY+ + IP GE + A+K++ + A E + S+
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLL--HGAGKGGA---DWEARYEVVLGVAH 873
+ ++ RLLG ++L+ +P G L + H G +W + +A
Sbjct: 79 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 131
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YL ++H D+ A NVL+ + DFGLA+++ + ++ + P
Sbjct: 132 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--- 185
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
+MA E + T +SDV+S+GV + E++T G P D
Sbjct: 186 --IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 29/221 (13%)
Query: 767 NLTSANVIGTGSSGVVYR-VTIPNGETL----AVKKMWSSDESGA---FSSEIQTLGSIR 818
V+G+G+ G VY+ + IP GE + A+K++ + A E + S+
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLL--HGAGKGGA---DWEARYEVVLGVAH 873
+ ++ RLLG ++L+ +P G L + H G +W + +A
Sbjct: 73 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAE 125
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YL ++H D+ A NVL+ + DFGLA+++ + ++ + P
Sbjct: 126 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--- 179
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
+MA E + T +SDV+S+GV + E++T G P D
Sbjct: 180 --IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 29/221 (13%)
Query: 767 NLTSANVIGTGSSGVVYR-VTIPNGETL----AVKKMWSSDESGA---FSSEIQTLGSIR 818
V+G+G+ G VY+ + IP GE + A+K++ + A E + S+
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLL--HGAGKGGA---DWEARYEVVLGVAH 873
+ ++ RLLG ++L+ +P G L + H G +W + +A
Sbjct: 78 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 130
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YL ++H D+ A NVL+ + DFGLA+++ + ++ + P
Sbjct: 131 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--- 184
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
+MA E + T +SDV+S+GV + E++T G P D
Sbjct: 185 --IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 65/211 (30%), Positives = 91/211 (43%), Gaps = 31/211 (14%)
Query: 788 PNGETLAVKKMWSSDES----GAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYL 842
PN T KM SD + SE++ + I +HKNI+ LLG + + +Y
Sbjct: 57 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 116
Query: 843 PNGSLSSLLHGAGKGGADW--------------EARYEVVLGVAHALAYLHHDCMPPILH 888
G+L L G ++ + VA + YL +H
Sbjct: 117 SKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIH 173
Query: 889 GDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQR 948
D+ A NVL+ +ADFGLAR + D TN R + +MAPE A R
Sbjct: 174 RDLAARNVLVTEDNVMKIADFGLARDIHHI-DYYKKTTNGRLPVK----WMAPE-ALFDR 227
Query: 949 I-TEKSDVYSFGVVLLEVLT-GRHPLDPTLP 977
I T +SDV+SFGV+L E+ T G P P +P
Sbjct: 228 IYTHQSDVWSFGVLLWEIFTLGGSPY-PGVP 257
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 29/221 (13%)
Query: 767 NLTSANVIGTGSSGVVYR-VTIPNGETL----AVKKMWSSDESGA---FSSEIQTLGSIR 818
V+G+G+ G VY+ + IP GE + A+K++ + A E + S+
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLL--HGAGKGGA---DWEARYEVVLGVAH 873
+ ++ RLLG ++L+ +P G L + H G +W + +A
Sbjct: 79 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 131
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YL ++H D+ A NVL+ + DFGLA+++ + ++ + P
Sbjct: 132 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--- 185
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
+MA E + T +SDV+S+GV + E++T G P D
Sbjct: 186 --IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 29/221 (13%)
Query: 767 NLTSANVIGTGSSGVVYR-VTIPNGETL----AVKKMWSSDESGA---FSSEIQTLGSIR 818
V+G+G+ G VY+ + IP GE + A+K++ + A E + S+
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLL--HGAGKGGA---DWEARYEVVLGVAH 873
+ ++ RLLG ++L+ +P G L + H G +W + +A
Sbjct: 83 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 135
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YL ++H D+ A NVL+ + DFGLA+++ + ++ + P
Sbjct: 136 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--- 189
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
+MA E + T +SDV+S+GV + E++T G P D
Sbjct: 190 --IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 29/221 (13%)
Query: 767 NLTSANVIGTGSSGVVYR-VTIPNGETL----AVKKMWSSDESGA---FSSEIQTLGSIR 818
V+G+G+ G VY+ + IP GE + A+K++ + A E + S+
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLL--HGAGKGGA---DWEARYEVVLGVAH 873
+ ++ RLLG ++L+ +P G L + H G +W + +A
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAK 128
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YL + +H D+ A NVL+ + DFGLA+++ + ++ + P
Sbjct: 129 GMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--- 182
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
+MA E + T +SDV+S+GV + E++T G P D
Sbjct: 183 --IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 29/221 (13%)
Query: 767 NLTSANVIGTGSSGVVYR-VTIPNGETL----AVKKMWSSDESGA---FSSEIQTLGSIR 818
V+G+G+ G VY+ + IP GE + A+K++ + A E + S+
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLL--HGAGKGGA---DWEARYEVVLGVAH 873
+ ++ RLLG ++L+ +P G L + H G +W + +A
Sbjct: 79 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 131
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YL ++H D+ A NVL+ + DFGLA+++ + ++ + P
Sbjct: 132 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--- 185
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
+MA E + T +SDV+S+GV + E++T G P D
Sbjct: 186 --IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 3/129 (2%)
Query: 274 QNLYLYQNSISGPIPGRIGALSKLKSLLLWQNSLVGAIP-DELGSCTELTVVDFSDNLLT 332
Q LYL+ N I+ PG +L LK L L N L GA+P S T+LTV+D N LT
Sbjct: 43 QILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLT 101
Query: 333 GSIPRSFGNLLKLQELQLSVNQLSGTIPIEIATCTALTHLEIDNNAISGEIPADIGNING 392
F L+ L+EL + N+L+ +P I T LTHL +D N + ++
Sbjct: 102 VLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSS 160
Query: 393 LTLFFAWKN 401
LT + + N
Sbjct: 161 LTHAYLFGN 169
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 63/136 (46%), Gaps = 13/136 (9%)
Query: 95 PSIFQPLKSLKRLIISSCNLTGTIPK-EFGDYRELTFIDLSGNSLWGEIPTEVC-RLRKL 152
P +F L +LK L + S N G +P F +LT +DL N L +P+ V RL L
Sbjct: 57 PGVFDSLINLKELYLGS-NQLGALPVGVFDSLTQLTVLDLGTNQL-TVLPSAVFDRLVHL 114
Query: 153 ESLYLNTNLLEGEIPSDIGNLSSLAYLTLYDNQLSGKIPKSIGALSKLQVFRAGGNQNLK 212
+ L++ N L E+P I L+ L +L L NQL + LS L GN
Sbjct: 115 KELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGN---- 169
Query: 213 GELPWEIGNCSNLVML 228
PW+ C +++ L
Sbjct: 170 ---PWDC-ECRDIMYL 181
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 4/119 (3%)
Query: 319 TELTVVDFSDNLLTGSIPRSFGNLLKLQELQLSVNQLSGTIPIEI-ATCTALTHLEIDNN 377
T ++ DN +T P F +L+ L+EL L NQL G +P+ + + T LT L++ N
Sbjct: 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTN 98
Query: 378 AISGEIPADIGNINGLTLFFAWKNKLTGNIPESLSQCQELQALDFSYNNLSGPIPKEIF 436
++ A + L F NKLT +P + + L L N L IP F
Sbjct: 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKS-IPHGAF 155
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 8/135 (5%)
Query: 525 GSVPDTLPTSLQLVDLSDNRLSGSLAHSIGSLTEXXXXXXXXNQLSGRIPAEIL-SCRKL 583
SVP +PT+ Q++ L DN+++ SL NQL G +P + S +L
Sbjct: 32 ASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQL 90
Query: 584 ILLDIGNNRFSGEIPKELGQXXXXXXXXXXXXXQFSGEIPSEFSGLTKLGILDLSHNKLS 643
+LD+G N+ + +P + + + E+P LT L L L N+L
Sbjct: 91 TVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLK 148
Query: 644 ----GDLDALASLQN 654
G D L+SL +
Sbjct: 149 SIPHGAFDRLSSLTH 163
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 29/221 (13%)
Query: 767 NLTSANVIGTGSSGVVYR-VTIPNGETL----AVKKMWSSDESGA---FSSEIQTLGSIR 818
V+G+G+ G VY+ + IP GE + A+K++ + A E + S+
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLL--HGAGKGGA---DWEARYEVVLGVAH 873
+ ++ RLLG ++L+ +P G L + H G +W + +A
Sbjct: 101 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 153
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YL ++H D+ A NVL+ + DFGLA+++ + ++ + P
Sbjct: 154 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--- 207
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
+MA E + T +SDV+S+GV + E++T G P D
Sbjct: 208 --IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 29/221 (13%)
Query: 767 NLTSANVIGTGSSGVVYR-VTIPNGETL----AVKKMWSSDESGA---FSSEIQTLGSIR 818
V+G+G+ G VY+ + IP GE + A+K++ + A E + S+
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLL--HGAGKGGA---DWEARYEVVLGVAH 873
+ ++ RLLG ++L+ +P G L + H G +W + +A
Sbjct: 82 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 134
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YL ++H D+ A NVL+ + DFGLA+++ + ++ + P
Sbjct: 135 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--- 188
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
+MA E + T +SDV+S+GV + E++T G P D
Sbjct: 189 --IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 56.6 bits (135), Expect = 6e-08, Method: Composition-based stats.
Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 21/211 (9%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMWSSDESGA----FSSEIQTLGSIRHKNIVRLLGWG 829
+G+G+ G V+ V + V K + D S +EI+ L S+ H NI+++
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 830 SNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARY--EVVLGVAHALAYLHHDCMPPIL 887
+ + + + G L + A G Y E++ + +ALAY H ++
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVV 146
Query: 888 HGDVKAMNVLL---GPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
H D+K N+L P + DFGLA + D++ + AG+ YMAPE
Sbjct: 147 HKDLKPENILFQDTSPHSPIKIIDFGLAELFKS--DEHSTNA------AGTALYMAPE-V 197
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975
+ +T K D++S GVV+ +LTG P T
Sbjct: 198 FKRDVTFKCDIWSAGVVMYFLLTGCLPFTGT 228
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 56.6 bits (135), Expect = 6e-08, Method: Composition-based stats.
Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 22/202 (10%)
Query: 792 TLAVKKM---WSSDESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPNGSL 847
T+AVK + + ++ SE++ + I +HKNI+ LLG + + +Y G+L
Sbjct: 69 TVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 848 SSLLHGAGKGGADW----------EARYEVVLGVAHALAY-LHHDCMPPILHGDVKAMNV 896
L G ++ + ++ ++ + LA + + +H D+ A NV
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 188
Query: 897 LLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVY 956
L+ +ADFGLAR ++ D TN R + +MAPE + T +SDV+
Sbjct: 189 LVTENNVMKIADFGLARDINNI-DYYKKTTNGRLPVK----WMAPEALFDRVYTHQSDVW 243
Query: 957 SFGVVLLEVLT-GRHPLDPTLP 977
SFGV++ E+ T G P P +P
Sbjct: 244 SFGVLMWEIFTLGGSPY-PGIP 264
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 86/209 (41%), Gaps = 19/209 (9%)
Query: 768 LTSANVIGTGSSGVVYR-VTIPNGETLAVKKM---WSSDESGAFSSEIQTLGSIRHKNIV 823
T + IG GS G VY+ + E +A+K + + DE EI L I
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 824 RLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLG-VAHALAYLHHDC 882
R G + +YL GS LL K G E +L + L YLH +
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLL----KPGPLEETYIATILREILKGLDYLHSER 136
Query: 883 MPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPE 942
+H D+KA NVLL LADFG V+G D K N G+ +MAPE
Sbjct: 137 K---IHRDIKAANVLLSEQGDVKLADFG----VAGQLTDTQIKRN---XFVGTPFWMAPE 186
Query: 943 HASMQRITEKSDVYSFGVVLLEVLTGRHP 971
K+D++S G+ +E+ G P
Sbjct: 187 VIKQSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 56.6 bits (135), Expect = 6e-08, Method: Composition-based stats.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 22/202 (10%)
Query: 792 TLAVKKMWSSDESGAFS---SEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPNGSL 847
T+AVK + S SE++ + I +HKNI+ LLG + + +Y G+L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 848 SSLLHGAGKGGADW----------EARYEVVLGVAHALAY-LHHDCMPPILHGDVKAMNV 896
L G ++ + ++ ++ + LA + + +H D+ A NV
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 188
Query: 897 LLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVY 956
L+ +ADFGLAR ++ D TN R + +MAPE + T +SDV+
Sbjct: 189 LVTENNVMRIADFGLARDINNI-DYYKKTTNGRLPVK----WMAPEALFDRVYTHQSDVW 243
Query: 957 SFGVVLLEVLT-GRHPLDPTLP 977
SFGV++ E+ T G P P +P
Sbjct: 244 SFGVLMWEIFTLGGSPY-PGIP 264
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 22/202 (10%)
Query: 792 TLAVKKMWSSDESGAFS---SEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPNGSL 847
T+AVK + S SE++ + I +HKNI+ LLG + + +Y G+L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNL 128
Query: 848 SSLLHGAGKGGADW----------EARYEVVLGVAHALAY-LHHDCMPPILHGDVKAMNV 896
L G ++ + ++ ++ + LA + + +H D+ A NV
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 188
Query: 897 LLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVY 956
L+ +ADFGLAR ++ D TN R + +MAPE + T +SDV+
Sbjct: 189 LVTENNVMKIADFGLARDINNI-DYYKKTTNGRLPVK----WMAPEALFDRVYTHQSDVW 243
Query: 957 SFGVVLLEVLT-GRHPLDPTLP 977
SFGV++ E+ T G P P +P
Sbjct: 244 SFGVLMWEIFTLGGSPY-PGIP 264
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 22/202 (10%)
Query: 792 TLAVKKMWSSDESGAFS---SEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPNGSL 847
T+AVK + S SE++ + I +HKNI+ LLG + + +Y G+L
Sbjct: 56 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 115
Query: 848 SSLLHGAGKGGADW----------EARYEVVLGVAHALAY-LHHDCMPPILHGDVKAMNV 896
L G ++ + ++ ++ + LA + + +H D+ A NV
Sbjct: 116 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNV 175
Query: 897 LLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVY 956
L+ +ADFGLAR ++ D TN R + +MAPE + T +SDV+
Sbjct: 176 LVTENNVMKIADFGLARDINNI-DYYKKTTNGRLPVK----WMAPEALFDRVYTHQSDVW 230
Query: 957 SFGVVLLEVLT-GRHPLDPTLP 977
SFGV++ E+ T G P P +P
Sbjct: 231 SFGVLMWEIFTLGGSPY-PGIP 251
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 30/211 (14%)
Query: 773 VIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLG-WG- 829
+IG+G G V++ +G+T +K++ ++E E++ L + H NIV G W
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA--EREVKALAKLDHVNIVHYNGCWDG 75
Query: 830 -------SNKN-----LKLLF--YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHAL 875
S+KN K LF ++ G+L + D E+ + +
Sbjct: 76 FDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGV 135
Query: 876 AYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGS 935
Y+H +++ D+K N+ L Q + DFGL + G +R + G+
Sbjct: 136 DYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG--------KRXRSKGT 184
Query: 936 YGYMAPEHASMQRITEKSDVYSFGVVLLEVL 966
YM+PE S Q ++ D+Y+ G++L E+L
Sbjct: 185 LRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 22/202 (10%)
Query: 792 TLAVKKMWSSDESGAFS---SEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPNGSL 847
T+AVK + S SE++ + I +HKNI+ LLG + + +Y G+L
Sbjct: 61 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 120
Query: 848 SSLLHGAGKGGADW----------EARYEVVLGVAHALAY-LHHDCMPPILHGDVKAMNV 896
L G ++ + ++ ++ + LA + + +H D+ A NV
Sbjct: 121 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 180
Query: 897 LLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVY 956
L+ +ADFGLAR ++ D TN R + +MAPE + T +SDV+
Sbjct: 181 LVTENNVMKIADFGLARDINNI-DYYKKTTNGRLPVK----WMAPEALFDRVYTHQSDVW 235
Query: 957 SFGVVLLEVLT-GRHPLDPTLP 977
SFGV++ E+ T G P P +P
Sbjct: 236 SFGVLMWEIFTLGGSPY-PGIP 256
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 22/202 (10%)
Query: 792 TLAVKKMWSSDESGAFS---SEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPNGSL 847
T+AVK + S SE++ + I +HKNI+ LLG + + +Y G+L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 848 SSLLHGAGKGGADW----------EARYEVVLGVAHALAY-LHHDCMPPILHGDVKAMNV 896
L G ++ + ++ ++ + LA + + +H D+ A NV
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 188
Query: 897 LLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVY 956
L+ +ADFGLAR ++ D + TN R + +MAPE + T +SDV+
Sbjct: 189 LVTENNVMKIADFGLARDINNI-DYYKNTTNGRLPVK----WMAPEALFDRVYTHQSDVW 243
Query: 957 SFGVVLLEVLT-GRHPLDPTLP 977
SFGV++ E+ T G P P +P
Sbjct: 244 SFGVLMWEIFTLGGSPY-PGIP 264
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 97/238 (40%), Gaps = 42/238 (17%)
Query: 753 LYQKLDFSIDDVVRNLTSANVIGTGSSGVVYR-VTIPNGETLAVKKMWSSDES------- 804
YQK D +VIG G S VV R V G AVK M + E
Sbjct: 92 FYQKYD-----------PKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLE 140
Query: 805 ---GAFSSEIQTLGSIR-HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGAD 860
A E L + H +I+ L+ + + L +D + G L L K
Sbjct: 141 EVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL--TEKVALS 198
Query: 861 WEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGD 920
+ ++ + A+++LH + I+H D+K N+LL Q L+DFG +
Sbjct: 199 EKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFS-------- 247
Query: 921 DNCSKTNQRPQLAGSYGYMAPE--HASMQRIT----EKSDVYSFGVVLLEVLTGRHPL 972
+ + +L G+ GY+APE SM ++ D+++ GV+L +L G P
Sbjct: 248 CHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 89/219 (40%), Gaps = 25/219 (11%)
Query: 766 RNLTSANVIGTGSSGVVYRVTI------PNGETLAVK---KMWSSDESGAFSSEIQTLGS 816
+N+T +G G+ G VY + P+ +AVK ++ S + F E +
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR-----YEVVLGV 871
H+NIVR +G + + + + G L S L + + V +
Sbjct: 91 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 150
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLL---GPGYQAYLADFGLARIVSGSGDDNCSKTNQ 928
A YL + +H D+ A N LL GPG A + DFG+A+ + +
Sbjct: 151 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAM 207
Query: 929 RPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
P +M PE T K+D +SFGV+L E+ +
Sbjct: 208 LP-----VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 56.2 bits (134), Expect = 8e-08, Method: Composition-based stats.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 22/202 (10%)
Query: 792 TLAVKKMWSSDESGAFS---SEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPNGSL 847
T+AVK + S SE++ + I +HKNI+ LLG + + +Y G+L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNL 128
Query: 848 SSLLHGAGKGGADW----------EARYEVVLGVAHALAY-LHHDCMPPILHGDVKAMNV 896
L G ++ + ++ ++ + LA + + +H D+ A NV
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 188
Query: 897 LLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVY 956
L+ +ADFGLAR ++ D TN R + +MAPE + T +SDV+
Sbjct: 189 LVTENNVMKIADFGLARDINNI-DYYKKTTNGRLPVK----WMAPEALFDRVYTHQSDVW 243
Query: 957 SFGVVLLEVLT-GRHPLDPTLP 977
SFGV++ E+ T G P P +P
Sbjct: 244 SFGVLMWEIFTLGGSPY-PGIP 264
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 22/202 (10%)
Query: 792 TLAVKKMWSSDESGAFS---SEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPNGSL 847
T+AVK + S SE++ + I +HKNI+ LLG + + +Y G+L
Sbjct: 58 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 117
Query: 848 SSLLHGAGKGGADW----------EARYEVVLGVAHALAY-LHHDCMPPILHGDVKAMNV 896
L G ++ + ++ ++ + LA + + +H D+ A NV
Sbjct: 118 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 177
Query: 897 LLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVY 956
L+ +ADFGLAR ++ D TN R + +MAPE + T +SDV+
Sbjct: 178 LVTENNVMKIADFGLARDINNI-DYYKKTTNGRLPVK----WMAPEALFDRVYTHQSDVW 232
Query: 957 SFGVVLLEVLT-GRHPLDPTLP 977
SFGV++ E+ T G P P +P
Sbjct: 233 SFGVLMWEIFTLGGSPY-PGIP 253
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 767 NLTSANVIGTGSSGVVYR-VTIPNGETL----AVKKMWSSDESGA---FSSEIQTLGSIR 818
V+G+G+ G VY+ + IP GE + A+K++ + A E + S+
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLL--HGAGKGGA---DWEARYEVVLGVAH 873
+ ++ RLLG ++L+ +P G L + H G +W + +A
Sbjct: 78 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 130
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YL ++H D+ A NVL+ + DFG A+++ + ++ + P
Sbjct: 131 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP--- 184
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
+MA E + T +SDV+S+GV + E++T G P D
Sbjct: 185 --IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 767 NLTSANVIGTGSSGVVYR-VTIPNGETL----AVKKMWSSDESGA---FSSEIQTLGSIR 818
V+G+G+ G VY+ + IP GE + A+K++ + A E + S+
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLL--HGAGKGGA---DWEARYEVVLGVAH 873
+ ++ RLLG ++L+ +P G L + H G +W + +A
Sbjct: 78 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 130
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YL ++H D+ A NVL+ + DFG A+++ + ++ + P
Sbjct: 131 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP--- 184
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
+MA E + T +SDV+S+GV + E++T G P D
Sbjct: 185 --IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 774 IGTGSSGVVYRVTIP-NGETLAVKKM--WSSDESGAFSSEIQTLGSIRHKNIVRLL-GWG 829
IG GS+G+V +G +AVK M +E+ + +H N+V + +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 830 SNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHG 889
+ L +L ++L G+L+ ++ + + E V V ALAYLH ++H
Sbjct: 113 VGEELWVLM-EFLQGGALTDIV---SQVRLNEEQIATVCEAVLQALAYLHAQ---GVIHR 165
Query: 890 DVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRI 949
D+K+ ++LL + L+DFG +S +R L G+ +MAPE S
Sbjct: 166 DIKSDSILLTLDGRVKLSDFGFCAQIS-------KDVPKRKXLVGTPYWMAPEVISRSLY 218
Query: 950 TEKSDVYSFGVVLLEVLTGRHP 971
+ D++S G++++E++ G P
Sbjct: 219 ATEVDIWSLGIMVIEMVDGEPP 240
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 93/222 (41%), Gaps = 31/222 (13%)
Query: 765 VRNLTSANVIGTGSSG----VVYRVTIPNGETLAVKKM---WSSDESGAFSSEIQTLGSI 817
V + +G G+ G V RVT E +AVK + + D EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVT---EEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 818 RHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLH-GAGKGGADWEARYEVVLGVAHALA 876
H+N+V+ G N++ LF +Y G L + G D + + ++ +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVV 118
Query: 877 YLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQL---- 932
YLH I H D+K N+LL ++DFGLA + + N R +L
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVF---------RYNNRERLLNKM 166
Query: 933 AGSYGYMAPEHASMQRI-TEKSDVYSFGVVLLEVLTGRHPLD 973
G+ Y+APE + E DV+S G+VL +L G P D
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 767 NLTSANVIGTGSSGVVYR-VTIPNGETL----AVKKMWSSDESGA---FSSEIQTLGSIR 818
V+ +G+ G VY+ + IP GE + A+K++ + A E + S+
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLL--HGAGKGGA---DWEARYEVVLGVAH 873
+ ++ RLLG ++L+ +P G L + H G +W + +A
Sbjct: 83 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 135
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YL ++H D+ A NVL+ + DFGLA+++ + ++ + P
Sbjct: 136 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--- 189
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
+MA E + T +SDV+S+GV + E++T G P D
Sbjct: 190 --IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 93/222 (41%), Gaps = 31/222 (13%)
Query: 765 VRNLTSANVIGTGSSG----VVYRVTIPNGETLAVKKM---WSSDESGAFSSEIQTLGSI 817
V + +G G+ G V RVT E +AVK + + D EI +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVT---EEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 818 RHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLH-GAGKGGADWEARYEVVLGVAHALA 876
H+N+V+ G N++ LF +Y G L + G D + + ++ +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVV 119
Query: 877 YLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQL---- 932
YLH I H D+K N+LL ++DFGLA + + N R +L
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVF---------RYNNRERLLNKM 167
Query: 933 AGSYGYMAPEHASMQRI-TEKSDVYSFGVVLLEVLTGRHPLD 973
G+ Y+APE + E DV+S G+VL +L G P D
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 773 VIGTGSSGVVYR-VTIPNGETL----AVKKMWSSDESGA---FSSEIQTLGSIRHKNIVR 824
V+G+G+ G VY+ + IP GE + A+K++ + A E + S+ + ++ R
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 825 LLGWGSNKNLKLLFYDYLPNGSLSSLL--HGAGKGGA---DWEARYEVVLGVAHALAYLH 879
LLG ++L+ +P G L + H G +W + +A + YL
Sbjct: 82 LLGICLTSTVQLI-TQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 134
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
++H D+ A NVL+ + DFGLA+++ + ++ + P +M
Sbjct: 135 DR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP-----IKWM 186
Query: 940 APEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
A E + T +SDV+S+GV + E++T G P D
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 773 VIGTGSSGVVYR-VTIPNGETL----AVKKMWSSDESGA---FSSEIQTLGSIRHKNIVR 824
V+G+G+ G VY+ + IP GE + A+K++ + A E + S+ + ++ R
Sbjct: 16 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 75
Query: 825 LLGWGSNKNLKLLFYDYLPNGSLSSLL--HGAGKGGA---DWEARYEVVLGVAHALAYLH 879
LLG ++L+ +P G L + H G +W + +A + YL
Sbjct: 76 LLGICLTSTVQLI-TQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 128
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
++H D+ A NVL+ + DFGLA+++ + ++ + P +M
Sbjct: 129 DR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP-----IKWM 180
Query: 940 APEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
A E + T +SDV+S+GV + E++T G P D
Sbjct: 181 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 22/215 (10%)
Query: 766 RNLTSANVIGTGSSGVVYRVTIPNGETLAVKKM----WSSDESGAFSSEIQTLGSIRHKN 821
++LT +GTG GVV +A+K + S DE F E + + ++ H+
Sbjct: 9 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE---FIEEAKVMMNLSHEK 65
Query: 822 IVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHD 881
+V+L G + + + +Y+ NG L + L + + E+ V A+ YL
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESK 124
Query: 882 CMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD--NCSKTNQRPQLAGSYGYM 939
LH D+ A N L+ ++DFGL+R V DD S+ ++ P +
Sbjct: 125 ---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL---DDEYTSSRGSKFP-----VRWS 173
Query: 940 APEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
PE + + KSD+++FGV++ E+ + G+ P +
Sbjct: 174 PPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 208
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 60/222 (27%), Positives = 91/222 (40%), Gaps = 29/222 (13%)
Query: 770 SANVIGTGSSGVVYRVTIPNGETL------------AVKKMWSSDESGAFSSEIQTLGSI 817
S VIG G GVVY +GE + ++ ++ + AF E + +
Sbjct: 25 SDRVIGKGHFGVVY-----HGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGL 79
Query: 818 RHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALA 876
H N++ L+G + L + Y+ +G L + + + L VA +
Sbjct: 80 NHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRN-PTVKDLISFGLQVARGME 138
Query: 877 YLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSY 936
YL +H D+ A N +L + +ADFGLAR + D Q
Sbjct: 139 YLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDIL---DREYYSVQQHRHARLPV 192
Query: 937 GYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHP----LDP 974
+ A E R T KSDV+SFGV+L E+LT P +DP
Sbjct: 193 KWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP 234
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 18/213 (8%)
Query: 766 RNLTSANVIGTGSSGVVYRVTIPNGETLAVKKM----WSSDESGAFSSEIQTLGSIRHKN 821
++LT +GTG GVV +A+K + S DE F E + + ++ H+
Sbjct: 15 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE---FIEEAKVMMNLSHEK 71
Query: 822 IVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHD 881
+V+L G + + + +Y+ NG L + L + + E+ V A+ YL
Sbjct: 72 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESK 130
Query: 882 CMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAP 941
LH D+ A N L+ ++DFGL+R V D+ S + + S P
Sbjct: 131 ---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD--DEYTSSVGSKFPVRWS----PP 181
Query: 942 EHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
E + + KSD+++FGV++ E+ + G+ P +
Sbjct: 182 EVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 214
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 18/213 (8%)
Query: 766 RNLTSANVIGTGSSGVVYRVTIPNGETLAVKKM----WSSDESGAFSSEIQTLGSIRHKN 821
++LT +GTG GVV +A+K + S DE F E + + ++ H+
Sbjct: 8 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE---FIEEAKVMMNLSHEK 64
Query: 822 IVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHD 881
+V+L G + + + +Y+ NG L + L + + E+ V A+ YL
Sbjct: 65 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESK 123
Query: 882 CMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAP 941
LH D+ A N L+ ++DFGL+R V D+ S + + S P
Sbjct: 124 ---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD--DEYTSSVGSKFPVRWS----PP 174
Query: 942 EHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
E + + KSD+++FGV++ E+ + G+ P +
Sbjct: 175 EVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 207
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 18/213 (8%)
Query: 766 RNLTSANVIGTGSSGVVYRVTIPNGETLAVKKM----WSSDESGAFSSEIQTLGSIRHKN 821
++LT +GTG GVV +A+K + S DE F E + + ++ H+
Sbjct: 9 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE---FIEEAKVMMNLSHEK 65
Query: 822 IVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHD 881
+V+L G + + + +Y+ NG L + L + + E+ V A+ YL
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESK 124
Query: 882 CMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAP 941
LH D+ A N L+ ++DFGL+R V D+ S + + S P
Sbjct: 125 ---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD--DEYTSSVGSKFPVRWS----PP 175
Query: 942 EHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
E + + KSD+++FGV++ E+ + G+ P +
Sbjct: 176 EVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 208
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 18/213 (8%)
Query: 766 RNLTSANVIGTGSSGVVYRVTIPNGETLAVKKM----WSSDESGAFSSEIQTLGSIRHKN 821
++LT +GTG GVV +A+K + S DE F E + + ++ H+
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE---FIEEAKVMMNLSHEK 60
Query: 822 IVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHD 881
+V+L G + + + +Y+ NG L + L + + E+ V A+ YL
Sbjct: 61 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESK 119
Query: 882 CMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAP 941
LH D+ A N L+ ++DFGL+R V D+ S + + S P
Sbjct: 120 ---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD--DEYTSSVGSKFPVRWS----PP 170
Query: 942 EHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
E + + KSD+++FGV++ E+ + G+ P +
Sbjct: 171 EVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 203
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 767 NLTSANVIGTGSSGVVYR-VTIPNGETL----AVKKMWSSDESGA---FSSEIQTLGSIR 818
V+ +G+ G VY+ + IP GE + A+K++ + A E + S+
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLL--HGAGKGGA---DWEARYEVVLGVAH 873
+ ++ RLLG ++L+ +P G L + H G +W + +A
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 128
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YL ++H D+ A NVL+ + DFGLA+++ + ++ + P
Sbjct: 129 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--- 182
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
+MA E + T +SDV+S+GV + E++T G P D
Sbjct: 183 --IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 22/202 (10%)
Query: 792 TLAVKKMWSSDESGAFS---SEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPNGSL 847
T+AVK + S SE++ + I +HKNI+ LLG + + Y G+L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNL 128
Query: 848 SSLLHGAGKGGADW----------EARYEVVLGVAHALAY-LHHDCMPPILHGDVKAMNV 896
L G ++ + ++ ++ + LA + + +H D+ A NV
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 188
Query: 897 LLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVY 956
L+ +ADFGLAR ++ D TN R + +MAPE + T +SDV+
Sbjct: 189 LVTENNVMKIADFGLARDINNI-DYYKKTTNGRLPVK----WMAPEALFDRVYTHQSDVW 243
Query: 957 SFGVVLLEVLT-GRHPLDPTLP 977
SFGV++ E+ T G P P +P
Sbjct: 244 SFGVLMWEIFTLGGSPY-PGIP 264
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 767 NLTSANVIGTGSSGVVYR-VTIPNGETL----AVKKMWSSDESGA---FSSEIQTLGSIR 818
V+G+G+ G VY+ + IP GE + A+K++ + A E + S+
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLL--HGAGKGGA---DWEARYEVVLGVAH 873
+ ++ RLLG ++L+ +P G L + H G +W + +A
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 128
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YL ++H D+ A NVL+ + DFG A+++ + ++ + P
Sbjct: 129 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP--- 182
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
+MA E + T +SDV+S+GV + E++T G P D
Sbjct: 183 --IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 22/202 (10%)
Query: 792 TLAVKKMWSSDESGAFS---SEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPNGSL 847
T+AVK + S SE++ + I +HKNI+ LLG + + Y G+L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNL 128
Query: 848 SSLLHGAGKGGADW----------EARYEVVLGVAHALAY-LHHDCMPPILHGDVKAMNV 896
L G ++ + ++ ++ + LA + + +H D+ A NV
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 188
Query: 897 LLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVY 956
L+ +ADFGLAR ++ D TN R + +MAPE + T +SDV+
Sbjct: 189 LVTENNVMKIADFGLARDINNI-DYYKKTTNGRLPVK----WMAPEALFDRVYTHQSDVW 243
Query: 957 SFGVVLLEVLT-GRHPLDPTLP 977
SFGV++ E+ T G P P +P
Sbjct: 244 SFGVLMWEIFTLGGSPY-PGIP 264
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 774 IGTGSSGVVYRVTIP-NGETLAVKKMWSSD-ESGAFSSEIQTLGSIR------HKNIVRL 825
IG G+ G VY+ P +G +A+K + + E G S ++ + +R H N+VRL
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 826 LG----WGSNKNLKL-LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHH 880
+ +++ +K+ L ++++ + L + L A G E +++ L +LH
Sbjct: 72 MDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA 130
Query: 881 DCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMA 940
+C I+H D+K N+L+ G LADFGLARI S + P + + Y A
Sbjct: 131 NC---IVHRDLKPENILVTSGGTVKLADFGLARIYS-------YQMALAPVVVTLW-YRA 179
Query: 941 PEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
PE D++S G + E+ R PL
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 774 IGTGSSGVVYRVTIP-NGETLAVKKMWSSD-ESGAFSSEIQTLGSIR------HKNIVRL 825
IG G+ G VY+ P +G +A+K + + E G S ++ + +R H N+VRL
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 826 LG----WGSNKNLKL-LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHH 880
+ +++ +K+ L ++++ + L + L A G E +++ L +LH
Sbjct: 72 MDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA 130
Query: 881 DCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMA 940
+C I+H D+K N+L+ G LADFGLARI S + P + + Y A
Sbjct: 131 NC---IVHRDLKPENILVTSGGTVKLADFGLARIYS-------YQMALDPVVVTLW-YRA 179
Query: 941 PEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
PE D++S G + E+ R PL
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 767 NLTSANVIGTGSSGVVYR-VTIPNGETL----AVKKMWSSDESGA---FSSEIQTLGSIR 818
V+G+G+ G VY+ + IP GE + A+K++ + A E + S+
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLL--HGAGKGGA---DWEARYEVVLGVAH 873
+ ++ RLLG ++L+ +P G L + H G +W + +A
Sbjct: 78 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 130
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YL ++H D+ A NVL+ + DFG A+++ + ++ + P
Sbjct: 131 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP--- 184
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
+MA E + T +SDV+S+GV + E++T G P D
Sbjct: 185 --IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 767 NLTSANVIGTGSSGVVYR-VTIPNGETL----AVKKMWSSDESGA---FSSEIQTLGSIR 818
V+G+G+ G VY+ + IP GE + A+K++ + A E + S+
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLL--HGAGKGGA---DWEARYEVVLGVAH 873
+ ++ RLLG ++L+ +P G L + H G +W + +A
Sbjct: 83 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 135
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YL ++H D+ A NVL+ + DFG A+++ + ++ + P
Sbjct: 136 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP--- 189
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
+MA E + T +SDV+S+GV + E++T G P D
Sbjct: 190 --IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 767 NLTSANVIGTGSSGVVYR-VTIPNGETL----AVKKMWSSDESGA---FSSEIQTLGSIR 818
V+ +G+ G VY+ + IP GE + A+K++ + A E + S+
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLL--HGAGKGGA---DWEARYEVVLGVAH 873
+ ++ RLLG ++L+ +P G L + H G +W + +A
Sbjct: 83 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 135
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
+ YL ++H D+ A NVL+ + DFGLA+++ + ++ + P
Sbjct: 136 GMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--- 189
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
+MA E + T +SDV+S+GV + E++T G P D
Sbjct: 190 --IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 774 IGTGSSGVVYRVTIP-NGETLAVKKMWSSD-ESGAFSSEIQTLGSIR------HKNIVRL 825
IG G+ G VY+ P +G +A+K + + E G S ++ + +R H N+VRL
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 826 LG----WGSNKNLKL-LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHH 880
+ +++ +K+ L ++++ + L + L A G E +++ L +LH
Sbjct: 72 MDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA 130
Query: 881 DCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMA 940
+C I+H D+K N+L+ G LADFGLARI S + P + + Y A
Sbjct: 131 NC---IVHRDLKPENILVTSGGTVKLADFGLARIYS-------YQMALFPVVVTLW-YRA 179
Query: 941 PEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
PE D++S G + E+ R PL
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 55/188 (29%), Positives = 86/188 (45%), Gaps = 17/188 (9%)
Query: 792 TLAVKKM---WSSDESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLL-FYDYLPNGS 846
T+AVK + + E A SE++ L I H N+V LLG + L+ ++ G+
Sbjct: 59 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 118
Query: 847 LSSLLHGAGKGGADWEARYEVVLGVAHALAY-------LHHDCMPPILHGDVKAMNVLLG 899
LS+ L ++ Y+ L + H + Y + +H D+ A N+LL
Sbjct: 119 LSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLS 178
Query: 900 PGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFG 959
+ DFGLAR + D K + R L +MAPE + T +SDV+SFG
Sbjct: 179 EKNVVKICDFGLARDIY-KDPDYVRKGDARLPLK----WMAPETIFDRVYTIQSDVWSFG 233
Query: 960 VVLLEVLT 967
V+L E+ +
Sbjct: 234 VLLWEIFS 241
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 24/221 (10%)
Query: 759 FSIDDVVRNLTSANVIGTGSSGVVYRVTIPNGE-TLAVKKMWSS--DESGA---FSSEIQ 812
F+IDD +G G G VY +A+K ++ S ++ G EI+
Sbjct: 20 FTIDD----FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIE 75
Query: 813 TLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVA 872
+ H NI+RL + ++ L +Y P G L L + D + ++ +A
Sbjct: 76 IQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCT--FDEQRTATIMEELA 133
Query: 873 HALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQL 932
AL Y H ++H D+K N+LLG + +ADFG + + + +R +
Sbjct: 134 DALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWSV---------HAPSLRRKTM 181
Query: 933 AGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLD 973
G+ Y+ PE + EK D++ GV+ E+L G P +
Sbjct: 182 CGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 60/213 (28%), Positives = 92/213 (43%), Gaps = 31/213 (14%)
Query: 774 IGTGSSG----VVYRVTIPNGETLAVKKM---WSSDESGAFSSEIQTLGSIRHKNIVRLL 826
+G G++G V RVT E +AVK + + D EI + H+N+V+
Sbjct: 14 LGEGAAGEVQLAVNRVT---EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 827 GWGSNKNLKLLFYDYLPNGSLSSLLH-GAGKGGADWEARYEVVLGVAHALAYLHHDCMPP 885
G N++ LF +Y G L + G D + + ++ + YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLHG---IG 124
Query: 886 ILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQL----AGSYGYMAP 941
I H D+K N+LL ++DFGLA + + N R +L G+ Y+AP
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVF---------RYNNRERLLNKMCGTLPYVAP 175
Query: 942 EHASMQRI-TEKSDVYSFGVVLLEVLTGRHPLD 973
E + E DV+S G+VL +L G P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 55/188 (29%), Positives = 86/188 (45%), Gaps = 17/188 (9%)
Query: 792 TLAVKKM---WSSDESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLL-FYDYLPNGS 846
T+AVK + + E A SE++ L I H N+V LLG + L+ ++ G+
Sbjct: 59 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 118
Query: 847 LSSLLHGAGKGGADWEARYEVVLGVAHALAY-------LHHDCMPPILHGDVKAMNVLLG 899
LS+ L ++ Y+ L + H + Y + +H D+ A N+LL
Sbjct: 119 LSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLS 178
Query: 900 PGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFG 959
+ DFGLAR + D K + R L +MAPE + T +SDV+SFG
Sbjct: 179 EKNVVKIXDFGLARDIY-KDPDYVRKGDARLPLK----WMAPETIFDRVYTIQSDVWSFG 233
Query: 960 VVLLEVLT 967
V+L E+ +
Sbjct: 234 VLLWEIFS 241
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 89/207 (42%), Gaps = 16/207 (7%)
Query: 772 NVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSI-RHKNIVRLLGWGS 830
VI + G+ T +K+ + E A SE++ L I H N+V LLG +
Sbjct: 44 QVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT 103
Query: 831 NKNLKLL-FYDYLPNGSLSSLLHGAGKGGADW--EARYEVVLGVAHALAY-------LHH 880
L+ ++ G+LS+ L + E Y+ L + H + Y +
Sbjct: 104 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEF 163
Query: 881 DCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMA 940
+H D+ A N+LL + DFGLAR + D K + R L +MA
Sbjct: 164 LASRKXIHRDLAARNILLSEKNVVKICDFGLARDIX-KDPDXVRKGDARLPLK----WMA 218
Query: 941 PEHASMQRITEKSDVYSFGVVLLEVLT 967
PE + T +SDV+SFGV+L E+ +
Sbjct: 219 PETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 60/213 (28%), Positives = 91/213 (42%), Gaps = 31/213 (14%)
Query: 774 IGTGSSG----VVYRVTIPNGETLAVKKM---WSSDESGAFSSEIQTLGSIRHKNIVRLL 826
+G G+ G V RVT E +AVK + + D EI + H+N+V+
Sbjct: 14 LGEGAYGEVQLAVNRVT---EEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 827 GWGSNKNLKLLFYDYLPNGSLSSLLH-GAGKGGADWEARYEVVLGVAHALAYLHHDCMPP 885
G N++ LF +Y G L + G D + + ++ + YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLHG---IG 124
Query: 886 ILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQL----AGSYGYMAP 941
I H D+K N+LL ++DFGLA + + N R +L G+ Y+AP
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVF---------RYNNRERLLNKMCGTLPYVAP 175
Query: 942 EHASMQRI-TEKSDVYSFGVVLLEVLTGRHPLD 973
E + E DV+S G+VL +L G P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 72/167 (43%), Gaps = 18/167 (10%)
Query: 810 EIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVL 869
E++ + + H NIV+L + L +Y G + L G+ + EAR +
Sbjct: 61 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRM-KEKEARSKF-R 118
Query: 870 GVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLAR--IVSGSGDDNC-SKT 926
+ A+ Y H I+H D+KA N+LL +ADFG + V G D C S
Sbjct: 119 QIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPP 175
Query: 927 NQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLD 973
P+L Y PE DV+S GV+L +++G P D
Sbjct: 176 YAAPELFQGKKYDGPE----------VDVWSLGVILYTLVSGSLPFD 212
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 93/222 (41%), Gaps = 19/222 (8%)
Query: 755 QKLDFSIDDVVRNLTSANVIGTGSSGVVYR-VTIPNGETLAVKKM---WSSDESGAFSSE 810
+ L F D T IG GS G V++ + + +A+K + + DE E
Sbjct: 16 ENLYFQSMDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQE 75
Query: 811 IQTLGSIRHKNIVRLLGWGSNKNLKL-LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVL 869
I L + + G K+ KL + +YL GS LL G D ++
Sbjct: 76 ITVLSQCDSPYVTKYYG-SYLKDTKLWIIMEYLGGGSALDLLE---PGPLDETQIATILR 131
Query: 870 GVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQR 929
+ L YLH + +H D+KA NVLL + LADFG V+G D K N
Sbjct: 132 EILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFG----VAGQLTDTQIKRN-- 182
Query: 930 PQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHP 971
G+ +MAPE K+D++S G+ +E+ G P
Sbjct: 183 -TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 60/213 (28%), Positives = 91/213 (42%), Gaps = 31/213 (14%)
Query: 774 IGTGSSG----VVYRVTIPNGETLAVKKM---WSSDESGAFSSEIQTLGSIRHKNIVRLL 826
+G G+ G V RVT E +AVK + + D EI + H+N+V+
Sbjct: 14 LGEGAYGEVQLAVNRVT---EEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 827 GWGSNKNLKLLFYDYLPNGSLSSLLH-GAGKGGADWEARYEVVLGVAHALAYLHHDCMPP 885
G N++ LF +Y G L + G D + + ++ + YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLHG---IG 124
Query: 886 ILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQL----AGSYGYMAP 941
I H D+K N+LL ++DFGLA + + N R +L G+ Y+AP
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVF---------RYNNRERLLNKMXGTLPYVAP 175
Query: 942 EHASMQRI-TEKSDVYSFGVVLLEVLTGRHPLD 973
E + E DV+S G+VL +L G P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 60/213 (28%), Positives = 91/213 (42%), Gaps = 31/213 (14%)
Query: 774 IGTGSSG----VVYRVTIPNGETLAVKKM---WSSDESGAFSSEIQTLGSIRHKNIVRLL 826
+G G+ G V RVT E +AVK + + D EI + H+N+V+
Sbjct: 15 LGEGAYGEVQLAVNRVT---EEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 71
Query: 827 GWGSNKNLKLLFYDYLPNGSLSSLLH-GAGKGGADWEARYEVVLGVAHALAYLHHDCMPP 885
G N++ LF +Y G L + G D + + ++ + YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLHG---IG 125
Query: 886 ILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQL----AGSYGYMAP 941
I H D+K N+LL ++DFGLA + + N R +L G+ Y+AP
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVF---------RYNNRERLLNKMXGTLPYVAP 176
Query: 942 EHASMQRI-TEKSDVYSFGVVLLEVLTGRHPLD 973
E + E DV+S G+VL +L G P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 55/211 (26%), Positives = 89/211 (42%), Gaps = 25/211 (11%)
Query: 774 IGTGSSGVVYRVT---IPNGET---LAVKKMWSS---DESGAFSSEIQTLGSIRHKNIVR 824
+G GS G+VY I GE +AVK + S E F +E + ++VR
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 825 LLGWGSNKNLKLLFYDYLPNGSLSSLL--------HGAGKGGADWEARYEVVLGVAHALA 876
LLG S L+ + + +G L S L + G+ + ++ +A +A
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 877 YLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSY 936
YL+ +H D+ A N ++ + + DFG+ R + + P
Sbjct: 142 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP-----V 193
Query: 937 GYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+MAPE T SD++SFGVVL E+ +
Sbjct: 194 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 55/211 (26%), Positives = 89/211 (42%), Gaps = 25/211 (11%)
Query: 774 IGTGSSGVVYRVT---IPNGET---LAVKKMWSS---DESGAFSSEIQTLGSIRHKNIVR 824
+G GS G+VY I GE +AVK + S E F +E + ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 825 LLGWGSNKNLKLLFYDYLPNGSLSSLL--------HGAGKGGADWEARYEVVLGVAHALA 876
LLG S L+ + + +G L S L + G+ + ++ +A +A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 877 YLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSY 936
YL+ +H D+ A N ++ + + DFG+ R + + P
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP-----V 196
Query: 937 GYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+MAPE T SD++SFGVVL E+ +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 60/213 (28%), Positives = 91/213 (42%), Gaps = 31/213 (14%)
Query: 774 IGTGSSG----VVYRVTIPNGETLAVKKM---WSSDESGAFSSEIQTLGSIRHKNIVRLL 826
+G G+ G V RVT E +AVK + + D EI + H+N+V+
Sbjct: 15 LGEGAYGEVQLAVNRVT---EEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFY 71
Query: 827 GWGSNKNLKLLFYDYLPNGSLSSLLH-GAGKGGADWEARYEVVLGVAHALAYLHHDCMPP 885
G N++ LF +Y G L + G D + + ++ + YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLHG---IG 125
Query: 886 ILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQL----AGSYGYMAP 941
I H D+K N+LL ++DFGLA + + N R +L G+ Y+AP
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVF---------RYNNRERLLNKMCGTLPYVAP 176
Query: 942 EHASMQRI-TEKSDVYSFGVVLLEVLTGRHPLD 973
E + E DV+S G+VL +L G P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 773 VIGTGSSGVVYR-VTIPNGETL----AVKKMWSSDESGA---FSSEIQTLGSIRHKNIVR 824
V+G+G+ G VY+ + IP GE + A+K++ + A E + S+ + ++ R
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 825 LLGWGSNKNLKLLFYDYLPNGSLSSLL--HGAGKGGA---DWEARYEVVLGVAHALAYLH 879
LLG ++L+ +P G L + H G +W + +A + YL
Sbjct: 86 LLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 138
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
++H D+ A NVL+ + DFG A+++ + ++ + P +M
Sbjct: 139 DR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP-----IKWM 190
Query: 940 APEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLD 973
A E + T +SDV+S+GV + E++T G P D
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 774 IGTGSSGVVYRVTIPNGETLAVKKMWS------SDESGAFSSEIQTLGSIRHKNIVRLLG 827
+G GS G V T + K S SD EI L +RH +I++L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ ++ +Y G L + + D R+ + A+ Y H I+
Sbjct: 77 VITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRF--FQQIICAIEYCHRH---KIV 130
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H D+K N+LL +ADFGL+ I++ D N KT+ GS Y APE + +
Sbjct: 131 HRDLKPENLLLDDNLNVKIADFGLSNIMT---DGNFLKTS-----CGSPNYAAPEVINGK 182
Query: 948 RIT-EKSDVYSFGVVLLEVLTGRHPLD 973
+ DV+S G+VL +L GR P D
Sbjct: 183 LYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 95/239 (39%), Gaps = 41/239 (17%)
Query: 750 EMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKK------MWSSDE 803
EM L+++ DF I VIG G+ G V V + N E + K M E
Sbjct: 68 EMQLHRE-DFEI---------IKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAE 117
Query: 804 SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEA 863
+ F E L + + I L ++N L DY G L +LL + A
Sbjct: 118 TACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMA 177
Query: 864 RY---EVVLGV--AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGS 918
R+ E+VL + H L Y+H D +K NVLL LADFG ++
Sbjct: 178 RFYIGEMVLAIDSIHQLHYVHRD---------IKPDNVLLDVNGHIRLADFGSCLKMNDD 228
Query: 919 GDDNCSKTNQRPQLAGSYGYMAPE-----HASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
G T Q G+ Y++PE M + + D +S GV + E+L G P
Sbjct: 229 G------TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 35/193 (18%)
Query: 790 GETLAVKKMWSS---DESGAFSSEIQTLGSIRHKNIVRLLGWGSNK---NLKLLFYDYLP 843
GE +AVK + + + EI L ++ H++I++ G + +L+L+ +Y+P
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVM-EYVP 118
Query: 844 NGSLSSLLHGAGKGGADWEARYEVVLG--------VAHALAYLHHDCMPPILHGDVKAMN 895
GSL D+ R+ + L + +AYLH +H D+ A N
Sbjct: 119 LGSLR-----------DYLPRHSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARN 164
Query: 896 VLLGPGYQAYLADFGLARIV-SGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSD 954
VLL + DFGLA+ V G + P + APE + SD
Sbjct: 165 VLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVF-----WYAPECLKEYKFYYASD 219
Query: 955 VYSFGVVLLEVLT 967
V+SFGV L E+LT
Sbjct: 220 VWSFGVTLYELLT 232
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 18/209 (8%)
Query: 772 NVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSI-RHKNIVRLLGWGS 830
VI + G+ T +K+ + E A SE++ L I H N+V LLG +
Sbjct: 79 QVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT 138
Query: 831 NKNLKLL-FYDYLPNGSLSSLLHGAGKGGADW----EARYEVVLGVAHALAY-------L 878
L+ ++ G+LS+ L + E Y+ L + H + Y +
Sbjct: 139 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGM 198
Query: 879 HHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGY 938
+H D+ A N+LL + DFGLAR + D K + R L +
Sbjct: 199 EFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY-KDPDYVRKGDARLPLK----W 253
Query: 939 MAPEHASMQRITEKSDVYSFGVVLLEVLT 967
MAPE + T +SDV+SFGV+L E+ +
Sbjct: 254 MAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 55/211 (26%), Positives = 89/211 (42%), Gaps = 25/211 (11%)
Query: 774 IGTGSSGVVYRVT---IPNGET---LAVKKMWSS---DESGAFSSEIQTLGSIRHKNIVR 824
+G GS G+VY I GE +AVK + S E F +E + ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 825 LLGWGSNKNLKLLFYDYLPNGSLSSLL--------HGAGKGGADWEARYEVVLGVAHALA 876
LLG S L+ + + +G L S L + G+ + ++ +A +A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 877 YLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSY 936
YL+ +H D+ A N ++ + + DFG+ R + + P
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP-----V 196
Query: 937 GYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+MAPE T SD++SFGVVL E+ +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H DVK N+L+ AYL DFG+A S + D+ K Q G+ Y APE S
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIA---SATTDE---KLTQLGNTVGTLYYXAPERFSES 210
Query: 948 RITEKSDVYSFGVVLLEVLTGRHP 971
T ++D+Y+ VL E LTG P
Sbjct: 211 HATYRADIYALTCVLYECLTGSPP 234
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 54/193 (27%), Positives = 85/193 (44%), Gaps = 35/193 (18%)
Query: 790 GETLAVKKMWSS---DESGAFSSEIQTLGSIRHKNIVRLLGWGSN---KNLKLLFYDYLP 843
GE +AVK + + + EI L ++ H++I++ G + K+L+L+ +Y+P
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVM-EYVP 101
Query: 844 NGSLSSLLHGAGKGGADWEARYEVVLG--------VAHALAYLHHDCMPPILHGDVKAMN 895
GSL D+ R+ + L + +AYLH +H ++ A N
Sbjct: 102 LGSLR-----------DYLPRHSIGLAQLLLFAQQICEGMAYLHSQ---HYIHRNLAARN 147
Query: 896 VLLGPGYQAYLADFGLARIV-SGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSD 954
VLL + DFGLA+ V G + P + APE + SD
Sbjct: 148 VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF-----WYAPECLKEYKFYYASD 202
Query: 955 VYSFGVVLLEVLT 967
V+SFGV L E+LT
Sbjct: 203 VWSFGVTLYELLT 215
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 89/209 (42%), Gaps = 19/209 (9%)
Query: 768 LTSANVIGTGSSGVVYR-VTIPNGETLAVKKM---WSSDESGAFSSEIQTLGSIRHKNIV 823
T IG GS G V++ + + +A+K + + DE EI L +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 824 RLLGWGSNKNLKL-LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDC 882
+ G K+ KL + +YL GS LL G D ++ + L YLH +
Sbjct: 84 KYYG-SYLKDTKLWIIMEYLGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEK 139
Query: 883 MPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPE 942
+H D+KA NVLL + LADFG V+G D K N G+ +MAPE
Sbjct: 140 K---IHRDIKAANVLLSEHGEVKLADFG----VAGQLTDTQIKRN---XFVGTPFWMAPE 189
Query: 943 HASMQRITEKSDVYSFGVVLLEVLTGRHP 971
K+D++S G+ +E+ G P
Sbjct: 190 VIKQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 85/207 (41%), Gaps = 18/207 (8%)
Query: 774 IGTGSSGVVYRVT-IPNGETLAVKKMWSSDESGAFS-----SEIQTLGSIRHKNIVRLLG 827
IG G VYR + +G +A+KK+ D A + EI L + H N+++
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR--YEVVLGVAHALAYLHHDCMPP 885
N + + G LS ++ K R ++ + + AL ++H
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---R 156
Query: 886 ILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHAS 945
++H D+K NV + L D GL R S SKT L G+ YM+PE
Sbjct: 157 VMHRDIKPANVFITATGVVKLGDLGLGRFFS-------SKTTAAHSLVGTPYYMSPERIH 209
Query: 946 MQRITEKSDVYSFGVVLLEVLTGRHPL 972
KSD++S G +L E+ + P
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMAALQSPF 236
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 89/209 (42%), Gaps = 19/209 (9%)
Query: 768 LTSANVIGTGSSGVVYR-VTIPNGETLAVKKM---WSSDESGAFSSEIQTLGSIRHKNIV 823
T IG GS G V++ + + +A+K + + DE EI L +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 824 RLLGWGSNKNLKL-LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDC 882
+ G K+ KL + +YL GS LL G D ++ + L YLH +
Sbjct: 69 KYYG-SYLKDTKLWIIMEYLGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEK 124
Query: 883 MPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPE 942
+H D+KA NVLL + LADFG V+G D K N G+ +MAPE
Sbjct: 125 K---IHRDIKAANVLLSEHGEVKLADFG----VAGQLTDTQIKRN---XFVGTPFWMAPE 174
Query: 943 HASMQRITEKSDVYSFGVVLLEVLTGRHP 971
K+D++S G+ +E+ G P
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 51/224 (22%), Positives = 91/224 (40%), Gaps = 43/224 (19%)
Query: 773 VIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLG-W-- 828
+IG+G G V++ +G+T ++++ ++E E++ L + H NIV G W
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKA--EREVKALAKLDHVNIVHYNGCWDG 76
Query: 829 ------------------------GSNKNLKLLF--YDYLPNGSLSSLLHGAGKGGADWE 862
S K LF ++ G+L + D
Sbjct: 77 FDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKV 136
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
E+ + + Y+H ++H D+K N+ L Q + DFGL + G
Sbjct: 137 LALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG--- 190
Query: 923 CSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVL 966
+R + G+ YM+PE S Q ++ D+Y+ G++L E+L
Sbjct: 191 -----KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 63/215 (29%), Positives = 91/215 (42%), Gaps = 36/215 (16%)
Query: 774 IGTGSSGVVYR-VTIPNGETLAVK----KMWSSDESGAFSSEIQTLGSIRHKNIVRLLGW 828
IG G+ VV R V + G A K K S+ + E + ++H NIVRL
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 829 GSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR-YEVVLGVAHAL-----AYLHHDC 882
S + L +D + G L D AR Y +H + A LH
Sbjct: 72 ISEEGFHYLVFDLVTGGELFE----------DIVAREYYSEADASHCIQQILEAVLHCHQ 121
Query: 883 MPPILHGDVKAMNVLLGP---GYQAYLADFGLARIVSGSGDDNCSKTNQRP--QLAGSYG 937
M ++H D+K N+LL G LADFGLA V G +Q+ AG+ G
Sbjct: 122 MG-VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQG---------DQQAWFGFAGTPG 171
Query: 938 YMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
Y++PE + + D+++ GV+L +L G P
Sbjct: 172 YLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPF 206
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLH-GAGKGGADWEARYEVVLGVAHAL 875
+ H+N+V+ G N++ LF +Y G L + G D + + ++ +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GV 118
Query: 876 AYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQL--- 932
YLH I H D+K N+LL ++DFGLA + + N R +L
Sbjct: 119 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF---------RYNNRERLLNK 166
Query: 933 -AGSYGYMAPEHASMQRI-TEKSDVYSFGVVLLEVLTGRHPLD 973
G+ Y+APE + E DV+S G+VL +L G P D
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLH-GAGKGGADWEARYEVVLGVAHAL 875
+ H+N+V+ G N++ LF +Y G L + G D + + ++ +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GV 118
Query: 876 AYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQL--- 932
YLH I H D+K N+LL ++DFGLA + + N R +L
Sbjct: 119 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF---------RYNNRERLLNK 166
Query: 933 -AGSYGYMAPEHASMQRI-TEKSDVYSFGVVLLEVLTGRHPLD 973
G+ Y+APE + E DV+S G+VL +L G P D
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLH-GAGKGGADWEARYEVVLGVAHAL 875
+ H+N+V+ G N++ LF +Y G L + G D + + ++ +
Sbjct: 60 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GV 116
Query: 876 AYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQL--- 932
YLH I H D+K N+LL ++DFGLA + + N R +L
Sbjct: 117 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF---------RYNNRERLLNK 164
Query: 933 -AGSYGYMAPEHASMQRI-TEKSDVYSFGVVLLEVLTGRHPLD 973
G+ Y+APE + E DV+S G+VL +L G P D
Sbjct: 165 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLH-GAGKGGADWEARYEVVLGVAHAL 875
+ H+N+V+ G N++ LF +Y G L + G D + + ++ +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GV 117
Query: 876 AYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQL--- 932
YLH I H D+K N+LL ++DFGLA + + N R +L
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF---------RYNNRERLLNK 165
Query: 933 -AGSYGYMAPEHASMQRI-TEKSDVYSFGVVLLEVLTGRHPLD 973
G+ Y+APE + E DV+S G+VL +L G P D
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLH-GAGKGGADWEARYEVVLGVAHAL 875
+ H+N+V+ G N++ LF +Y G L + G D + + ++ +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GV 117
Query: 876 AYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQL--- 932
YLH I H D+K N+LL ++DFGLA + + N R +L
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF---------RYNNRERLLNK 165
Query: 933 -AGSYGYMAPEHASMQRI-TEKSDVYSFGVVLLEVLTGRHPLD 973
G+ Y+APE + E DV+S G+VL +L G P D
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLH-GAGKGGADWEARYEVVLGVAHAL 875
+ H+N+V+ G N++ LF +Y G L + G D + + ++ +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GV 118
Query: 876 AYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQL--- 932
YLH I H D+K N+LL ++DFGLA + + N R +L
Sbjct: 119 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF---------RYNNRERLLNK 166
Query: 933 -AGSYGYMAPEHASMQRI-TEKSDVYSFGVVLLEVLTGRHPLD 973
G+ Y+APE + E DV+S G+VL +L G P D
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLH-GAGKGGADWEARYEVVLGVAHAL 875
+ H+N+V+ G N++ LF +Y G L + G D + + ++ +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GV 117
Query: 876 AYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQL--- 932
YLH I H D+K N+LL ++DFGLA + + N R +L
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF---------RYNNRERLLNK 165
Query: 933 -AGSYGYMAPEHASMQRI-TEKSDVYSFGVVLLEVLTGRHPLD 973
G+ Y+APE + E DV+S G+VL +L G P D
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLH-GAGKGGADWEARYEVVLGVAHAL 875
+ H+N+V+ G N++ LF +Y G L + G D + + ++ +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GV 117
Query: 876 AYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQL--- 932
YLH I H D+K N+LL ++DFGLA + + N R +L
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF---------RYNNRERLLNK 165
Query: 933 -AGSYGYMAPEHASMQRI-TEKSDVYSFGVVLLEVLTGRHPLD 973
G+ Y+APE + E DV+S G+VL +L G P D
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLH-GAGKGGADWEARYEVVLGVAHAL 875
+ H+N+V+ G N++ LF +Y G L + G D + + ++ +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GV 117
Query: 876 AYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQL--- 932
YLH I H D+K N+LL ++DFGLA + + N R +L
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF---------RYNNRERLLNK 165
Query: 933 -AGSYGYMAPEHASMQRI-TEKSDVYSFGVVLLEVLTGRHPLD 973
G+ Y+APE + E DV+S G+VL +L G P D
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLH-GAGKGGADWEARYEVVLGVAHAL 875
+ H+N+V+ G N++ LF +Y G L + G D + + ++ +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GV 118
Query: 876 AYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQL--- 932
YLH I H D+K N+LL ++DFGLA + + N R +L
Sbjct: 119 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF---------RYNNRERLLNK 166
Query: 933 -AGSYGYMAPEHASMQRI-TEKSDVYSFGVVLLEVLTGRHPLD 973
G+ Y+APE + E DV+S G+VL +L G P D
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLH-GAGKGGADWEARYEVVLGVAHAL 875
+ H+N+V+ G N++ LF +Y G L + G D + + ++ +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GV 118
Query: 876 AYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQL--- 932
YLH I H D+K N+LL ++DFGLA + + N R +L
Sbjct: 119 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF---------RYNNRERLLNK 166
Query: 933 -AGSYGYMAPEHASMQRI-TEKSDVYSFGVVLLEVLTGRHPLD 973
G+ Y+APE + E DV+S G+VL +L G P D
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 89/209 (42%), Gaps = 19/209 (9%)
Query: 768 LTSANVIGTGSSGVVYR-VTIPNGETLAVKKM---WSSDESGAFSSEIQTLGSIRHKNIV 823
T IG GS G V++ + + +A+K + + DE EI L +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 824 RLLGWGSNKNLKL-LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDC 882
+ G K+ KL + +YL GS LL G D ++ + L YLH +
Sbjct: 69 KYYG-SYLKDTKLWIIMEYLGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEK 124
Query: 883 MPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPE 942
+H D+KA NVLL + LADFG V+G D K N G+ +MAPE
Sbjct: 125 K---IHRDIKAANVLLSEHGEVKLADFG----VAGQLTDTQIKRN---TFVGTPFWMAPE 174
Query: 943 HASMQRITEKSDVYSFGVVLLEVLTGRHP 971
K+D++S G+ +E+ G P
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 95/239 (39%), Gaps = 41/239 (17%)
Query: 750 EMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKK------MWSSDE 803
EM L+++ DF I VIG G+ G V V + N E + K M E
Sbjct: 84 EMQLHRE-DFEI---------IKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAE 133
Query: 804 SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEA 863
+ F E L + + I L ++N L DY G L +LL + A
Sbjct: 134 TACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMA 193
Query: 864 RY---EVVLGV--AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGS 918
R+ E+VL + H L Y+H D +K NVLL LADFG ++
Sbjct: 194 RFYIGEMVLAIDSIHQLHYVHRD---------IKPDNVLLDVNGHIRLADFGSCLKMNDD 244
Query: 919 GDDNCSKTNQRPQLAGSYGYMAPE-----HASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
G T Q G+ Y++PE M + + D +S GV + E+L G P
Sbjct: 245 G------TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 54/193 (27%), Positives = 85/193 (44%), Gaps = 35/193 (18%)
Query: 790 GETLAVKKMWSS---DESGAFSSEIQTLGSIRHKNIVRLLGWGSN---KNLKLLFYDYLP 843
GE +AVK + + + EI L ++ H++I++ G + K+L+L+ +Y+P
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVM-EYVP 101
Query: 844 NGSLSSLLHGAGKGGADWEARYEVVLG--------VAHALAYLHHDCMPPILHGDVKAMN 895
GSL D+ R+ + L + +AYLH +H ++ A N
Sbjct: 102 LGSLR-----------DYLPRHSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRNLAARN 147
Query: 896 VLLGPGYQAYLADFGLARIV-SGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSD 954
VLL + DFGLA+ V G + P + APE + SD
Sbjct: 148 VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF-----WYAPECLKEYKFYYASD 202
Query: 955 VYSFGVVLLEVLT 967
V+SFGV L E+LT
Sbjct: 203 VWSFGVTLYELLT 215
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLH-GAGKGGADWEARYEVVLGVAHAL 875
+ H+N+V+ G N++ LF +Y G L + G D + + ++ +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GV 117
Query: 876 AYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQL--- 932
YLH I H D+K N+LL ++DFGLA + + N R +L
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF---------RYNNRERLLNK 165
Query: 933 -AGSYGYMAPEHASMQRI-TEKSDVYSFGVVLLEVLTGRHPLD 973
G+ Y+APE + E DV+S G+VL +L G P D
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLH-GAGKGGADWEARYEVVLGVAHAL 875
+ H+N+V+ G N++ LF +Y G L + G D + + ++ +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GV 117
Query: 876 AYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQL--- 932
YLH I H D+K N+LL ++DFGLA + + N R +L
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF---------RYNNRERLLNK 165
Query: 933 -AGSYGYMAPEHASMQRI-TEKSDVYSFGVVLLEVLTGRHPLD 973
G+ Y+APE + E DV+S G+VL +L G P D
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLH-GAGKGGADWEARYEVVLGVAHAL 875
+ H+N+V+ G N++ LF +Y G L + G D + + ++ +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GV 117
Query: 876 AYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQL--- 932
YLH I H D+K N+LL ++DFGLA + + N R +L
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF---------RYNNRERLLNK 165
Query: 933 -AGSYGYMAPEHASMQRI-TEKSDVYSFGVVLLEVLTGRHPLD 973
G+ Y+APE + E DV+S G+VL +L G P D
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 47/208 (22%), Positives = 90/208 (43%), Gaps = 18/208 (8%)
Query: 774 IGTGSSGVVYRVT------IPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLG 827
+G G Y +T + G+ + + + S+EI S+ + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + + + + SL L H K + EARY + + YLH++ ++
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEPEARY-FMRQTIQGVQYLHNN---RVI 164
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H D+K N+ L + DFGLA + G+ ++ L G+ Y+APE +
Sbjct: 165 HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE-------RKKDLCGTPNYIAPEVLCKK 217
Query: 948 RITEKSDVYSFGVVLLEVLTGRHPLDPT 975
+ + D++S G +L +L G+ P + +
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 47/208 (22%), Positives = 90/208 (43%), Gaps = 18/208 (8%)
Query: 774 IGTGSSGVVYRVT------IPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLG 827
+G G Y +T + G+ + + + S+EI S+ + ++V G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + + + + SL L H K + EARY + + YLH++ ++
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEPEARY-FMRQTIQGVQYLHNN---RVI 148
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H D+K N+ L + DFGLA + G+ ++ L G+ Y+APE +
Sbjct: 149 HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE-------RKKDLCGTPNYIAPEVLCKK 201
Query: 948 RITEKSDVYSFGVVLLEVLTGRHPLDPT 975
+ + D++S G +L +L G+ P + +
Sbjct: 202 GHSFEVDIWSLGCILYTLLVGKPPFETS 229
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 14/112 (12%)
Query: 866 EVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSK 925
++ + + AL +LH ++H DVK NVL+ Q + DFG +SG D+ +K
Sbjct: 157 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFG----ISGYLVDSVAK 210
Query: 926 TNQRPQLAGSYGYMAPEHA----SMQRITEKSDVYSFGVVLLEVLTGRHPLD 973
T AG YMAPE + + + KSD++S G+ ++E+ R P D
Sbjct: 211 TID----AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD 258
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 47/208 (22%), Positives = 90/208 (43%), Gaps = 18/208 (8%)
Query: 774 IGTGSSGVVYRVT------IPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLG 827
+G G Y +T + G+ + + + S+EI S+ + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + + + + SL L H K + EARY + + YLH++ ++
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEPEARY-FMRQTIQGVQYLHNN---RVI 164
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H D+K N+ L + DFGLA + G+ ++ L G+ Y+APE +
Sbjct: 165 HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE-------RKKTLCGTPNYIAPEVLCKK 217
Query: 948 RITEKSDVYSFGVVLLEVLTGRHPLDPT 975
+ + D++S G +L +L G+ P + +
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 52.8 bits (125), Expect = 8e-07, Method: Composition-based stats.
Identities = 47/208 (22%), Positives = 90/208 (43%), Gaps = 18/208 (8%)
Query: 774 IGTGSSGVVYRVT------IPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLG 827
+G G Y +T + G+ + + + S+EI S+ + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + + + + SL L H K + EARY + + YLH++ ++
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEPEARY-FMRQTIQGVQYLHNN---RVI 164
Query: 888 HGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ 947
H D+K N+ L + DFGLA + G+ ++ L G+ Y+APE +
Sbjct: 165 HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE-------RKKXLCGTPNYIAPEVLCKK 217
Query: 948 RITEKSDVYSFGVVLLEVLTGRHPLDPT 975
+ + D++S G +L +L G+ P + +
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 57/217 (26%), Positives = 88/217 (40%), Gaps = 41/217 (18%)
Query: 774 IGTGSSGVVYR-----VTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLL-G 827
IG GS VY+ T+ + + E F E + L ++H NIVR
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 828 WGSN---KNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEV----VL-----GVAHAL 875
W S K +L + +G+L + L R++V VL + L
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLK-----------RFKVXKIKVLRSWCRQILKGL 142
Query: 876 AYLHHDCMPPILHGDVKAMNVLL-GPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAG 934
+LH PPI+H D+K N+ + GP + D GLA + + + + G
Sbjct: 143 QFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL---------KRASFAKAVIG 192
Query: 935 SYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHP 971
+ + APE ++ E DVY+FG LE T +P
Sbjct: 193 TPEFXAPEXYE-EKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 55/211 (26%), Positives = 89/211 (42%), Gaps = 25/211 (11%)
Query: 774 IGTGSSGVVYRVT---IPNGET---LAVKKMWSS---DESGAFSSEIQTLGSIRHKNIVR 824
+G GS G+VY I GE +AVK + S E F +E + ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 825 LLGWGSNKNLKLLFYDYLPNGSLSSLL--------HGAGKGGADWEARYEVVLGVAHALA 876
LLG S L+ + + +G L S L + G+ + ++ +A +A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 877 YLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSY 936
YL+ +H D+ A N ++ + + DFG+ R + + P
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLP-----V 196
Query: 937 GYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+MAPE T SD++SFGVVL E+ +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 103/233 (44%), Gaps = 23/233 (9%)
Query: 754 YQKLDFSIDDVVRNLTSANVIGTGSSGVVYRVT-IPNGETLAVKKMWSSDESGAFS---- 808
Y ++ D V IG G+ G V++ G+ +A+KK+ +E F
Sbjct: 6 YDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITAL 65
Query: 809 SEIQTLGSIRHKNIVRLLG--------WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGAD 860
EI+ L ++H+N+V L+ + K L +D+ + L+ LL
Sbjct: 66 REIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTL 124
Query: 861 WEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGD 920
E + V+ + + L Y+H + ILH D+KA NVL+ LADFGLAR S + +
Sbjct: 125 SEIK-RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 180
Query: 921 DNCSKTNQRPQLAGSYGYMAPEHASMQR-ITEKSDVYSFGVVLLEVLTGRHPL 972
S+ N+ + Y PE +R D++ G ++ E+ T R P+
Sbjct: 181 ---SQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 18/167 (10%)
Query: 810 EIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLL--HGAGKGGADWEARYEV 867
E++ + + H NIV+L + L +Y G + L HG K + EAR +
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK---EKEARAKF 119
Query: 868 VLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927
+ A+ Y H I+H D+KA N+LL +ADFG + + + N
Sbjct: 120 -RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS--------NEFTFGN 167
Query: 928 QRPQLAGSYGYMAPEHASMQRIT-EKSDVYSFGVVLLEVLTGRHPLD 973
+ + GS Y APE ++ + DV+S GV+L +++G P D
Sbjct: 168 KLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 131 IDLSGNSLWGEIPTEVCRLRKLESLYLNTNLLEGEIPSDIGNLSSLAYLTLYDNQLSGKI 190
+DLS ++ I + + L LYLN N L E+P++I NLS+L L L N+L+ +
Sbjct: 229 LDLSNLQIFN-ISANIFKYDFLTRLYLNGNSL-TELPAEIKNLSNLRVLDLSHNRLTS-L 285
Query: 191 PKSIGALSKLQVFRAGGNQNLKGELPWEIGNCSNLVMLGL 230
P +G+ +L+ F N + LPWE GN NL LG+
Sbjct: 286 PAELGSCFQLKYFYFFDN--MVTTLPWEFGNLCNLQFLGV 323
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 273 LQNLYLYQNSISGPIPGRIGALSKLKSLLLWQNSLVGAIPDELGSCTELTVVDFSDNLLT 332
L LYL NS++ +P I LS L+ L L N L ++P ELGSC +L F DN++T
Sbjct: 249 LTRLYLNGNSLTE-LPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT 306
Query: 333 GSIPRSFGNLLKLQELQLSVNQLSGTIPIEIATCTALTHL 372
++P FGNL LQ L + N L ++I T ++T L
Sbjct: 307 -TLPWEFGNLCNLQFLGVEGNPLEKQF-LKILTEKSVTGL 344
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 57/145 (39%), Gaps = 44/145 (30%)
Query: 169 DIGNLSSLAYLTLYDNQLSGKIPKSIGALSKLQVF-------------RAGGNQNLKGEL 215
DI N + + YD+QL + LS LQ+F R N N EL
Sbjct: 208 DIENRMVMPKDSKYDDQLWHAL-----DLSNLQIFNISANIFKYDFLTRLYLNGNSLTEL 262
Query: 216 PWEIGNCSNLVMLGLAETSISGNVPSSIGMLERIQTIAIYTSLLSGPIPEEIGNCSELQN 275
P EI N SNL +L L+ ++ +P E+G+C +L+
Sbjct: 263 PAEIKNLSNLRVLDLSHNRLTS-------------------------LPAELGSCFQLKY 297
Query: 276 LYLYQNSISGPIPGRIGALSKLKSL 300
Y + N ++ +P G L L+ L
Sbjct: 298 FYFFDNMVTT-LPWEFGNLCNLQFL 321
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 621 EIPSEFSGLTKLGILDLSHNKLSG 644
E+P+E L+ L +LDLSHN+L+
Sbjct: 261 ELPAEIKNLSNLRVLDLSHNRLTS 284
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 103/233 (44%), Gaps = 23/233 (9%)
Query: 754 YQKLDFSIDDVVRNLTSANVIGTGSSGVVYRVT-IPNGETLAVKKMWSSDESGAFS---- 808
Y ++ D V IG G+ G V++ G+ +A+KK+ +E F
Sbjct: 6 YDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITAL 65
Query: 809 SEIQTLGSIRHKNIVRLLG--------WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGAD 860
EI+ L ++H+N+V L+ + K L +D+ + L+ LL
Sbjct: 66 REIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTL 124
Query: 861 WEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGD 920
E + V+ + + L Y+H + ILH D+KA NVL+ LADFGLAR S + +
Sbjct: 125 SEIK-RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 180
Query: 921 DNCSKTNQRPQLAGSYGYMAPEHASMQR-ITEKSDVYSFGVVLLEVLTGRHPL 972
S+ N+ + Y PE +R D++ G ++ E+ T R P+
Sbjct: 181 ---SQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 103/233 (44%), Gaps = 23/233 (9%)
Query: 754 YQKLDFSIDDVVRNLTSANVIGTGSSGVVYRVT-IPNGETLAVKKMWSSDESGAFS---- 808
Y ++ D V IG G+ G V++ G+ +A+KK+ +E F
Sbjct: 5 YDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITAL 64
Query: 809 SEIQTLGSIRHKNIVRLLG--------WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGAD 860
EI+ L ++H+N+V L+ + K L +D+ + L+ LL
Sbjct: 65 REIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTL 123
Query: 861 WEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGD 920
E + V+ + + L Y+H + ILH D+KA NVL+ LADFGLAR S + +
Sbjct: 124 SEIK-RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 179
Query: 921 DNCSKTNQRPQLAGSYGYMAPEHASMQR-ITEKSDVYSFGVVLLEVLTGRHPL 972
S+ N+ + Y PE +R D++ G ++ E+ T R P+
Sbjct: 180 ---SQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 228
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 103/233 (44%), Gaps = 23/233 (9%)
Query: 754 YQKLDFSIDDVVRNLTSANVIGTGSSGVVYRVT-IPNGETLAVKKMWSSDESGAFS---- 808
Y ++ D V IG G+ G V++ G+ +A+KK+ +E F
Sbjct: 6 YDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITAL 65
Query: 809 SEIQTLGSIRHKNIVRLLG--------WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGAD 860
EI+ L ++H+N+V L+ + K L +D+ + L+ LL
Sbjct: 66 REIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTL 124
Query: 861 WEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGD 920
E + V+ + + L Y+H + ILH D+KA NVL+ LADFGLAR S + +
Sbjct: 125 SEIK-RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 180
Query: 921 DNCSKTNQRPQLAGSYGYMAPEHASMQR-ITEKSDVYSFGVVLLEVLTGRHPL 972
S+ N+ + Y PE +R D++ G ++ E+ T R P+
Sbjct: 181 ---SQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 21/207 (10%)
Query: 774 IGTGSSGVVYR-VTIPNGETLAVK----KMWSSDESGAFSSEIQTLGSIRHKNIVRLLGW 828
+G G+ VV R V G A K K S+ + E + ++H NIVRL
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 96
Query: 829 GSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILH 888
++ L +D + G L + A + ++ +A + + + ++AY H + I+H
Sbjct: 97 IQEESFHYLVFDLVTGGELFEDI-VAREFYSEADASH-CIQQILESIAYCHSN---GIVH 151
Query: 889 GDVKAMNVLLG---PGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHAS 945
++K N+LL G LADFGLA V+ S AG+ GY++PE
Sbjct: 152 RNLKPENLLLASKAKGAAVKLADFGLAIEVNDS--------EAWHGFAGTPGYLSPEVLK 203
Query: 946 MQRITEKSDVYSFGVVLLEVLTGRHPL 972
++ D+++ GV+L +L G P
Sbjct: 204 KDPYSKPVDIWACGVILYILLVGYPPF 230
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 55/211 (26%), Positives = 89/211 (42%), Gaps = 25/211 (11%)
Query: 774 IGTGSSGVVYRVT---IPNGET---LAVKKMWSS---DESGAFSSEIQTLGSIRHKNIVR 824
+G GS G+VY I GE +AVK + S E F +E + ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 825 LLGWGSNKNLKLLFYDYLPNGSLSSLL--------HGAGKGGADWEARYEVVLGVAHALA 876
LLG S L+ + + +G L S L + G+ + ++ +A +A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 877 YLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSY 936
YL+ +H D+ A N ++ + + DFG+ R + + P
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP-----V 196
Query: 937 GYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+MAPE T SD++SFGVVL E+ +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 55/211 (26%), Positives = 89/211 (42%), Gaps = 25/211 (11%)
Query: 774 IGTGSSGVVYRVT---IPNGET---LAVKKMWSS---DESGAFSSEIQTLGSIRHKNIVR 824
+G GS G+VY I GE +AVK + S E F +E + ++VR
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 825 LLGWGSNKNLKLLFYDYLPNGSLSSLL--------HGAGKGGADWEARYEVVLGVAHALA 876
LLG S L+ + + +G L S L + G+ + ++ +A +A
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 877 YLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSY 936
YL+ +H D+ A N ++ + + DFG+ R + + P
Sbjct: 144 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP-----V 195
Query: 937 GYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+MAPE T SD++SFGVVL E+ +
Sbjct: 196 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 70/148 (47%), Gaps = 16/148 (10%)
Query: 774 IGTGSSGVVYRVTIPNGET---LAVKKM-WSSDESGAFSS---EIQTLGSIRHKNIVRLL 826
IG G+ G V++ N ET +A+K++ D+ G SS EI L ++HKNIVRL
Sbjct: 10 IGEGTYGTVFKAK--NRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 827 G-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPP 885
S+K L L+F + L G D E + + L + H
Sbjct: 68 DVLHSDKKLTLVFE--FCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSR---N 121
Query: 886 ILHGDVKAMNVLLGPGYQAYLADFGLAR 913
+LH D+K N+L+ + LADFGLAR
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLAR 149
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 85/208 (40%), Gaps = 17/208 (8%)
Query: 768 LTSANVIGTGSSGVVYR-VTIPNGETLAVKKM---WSSDESGAFSSEIQTLGSIRHKNIV 823
T IG GS G V++ + + +A+K + + DE EI L +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 824 RLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCM 883
+ G + + +YL GS LL G D ++ + L YLH +
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSEKK 141
Query: 884 PPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEH 943
+H D+KA NVLL LADFG V+G D K N G+ +MAPE
Sbjct: 142 ---IHRDIKAANVLLSEQGDVKLADFG----VAGQLTDTQIKRN---TFVGTPFWMAPEV 191
Query: 944 ASMQRITEKSDVYSFGVVLLEVLTGRHP 971
K+D++S G+ +E+ G P
Sbjct: 192 IQQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 86/208 (41%), Gaps = 22/208 (10%)
Query: 774 IGTGSSGVVYRVT--IPNGETLA----VKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLG 827
+G G+ VV R P E A KK+ S+ + E + ++H NIVRL
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKL-SARDHQKLEREARICRLLKHPNIVRLHD 97
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
S + L +D + G L + ++ + + + L ++H I+
Sbjct: 98 SISEEGFHYLVFDLVTGGELFEDI-----VAREYYSEADASHCIHQILESVNHIHQHDIV 152
Query: 888 HGDVKAMNVLLG---PGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
H D+K N+LL G LADFGLA V G AG+ GY++PE
Sbjct: 153 HRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFG-------FAGTPGYLSPEVL 205
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPL 972
+ D+++ GV+L +L G P
Sbjct: 206 RKDPYGKPVDIWACGVILYILLVGYPPF 233
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 93/232 (40%), Gaps = 25/232 (10%)
Query: 763 DVVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGSIR 818
DV T IG G+ G+V +T K S E + EIQ L R
Sbjct: 40 DVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFR 99
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR-----YEVVLGVAH 873
H+N++ + L+ + Y+ + + L+ K Y+++ G
Sbjct: 100 HENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRG--- 156
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
L Y+H +LH D+K N+L+ + DFGLARI D T +
Sbjct: 157 -LKYIHS---ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLT----EXV 208
Query: 934 GSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQ 984
+ Y APE + + T+ D++S G +L E+L+ R P PG L Q
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPGKHYLDQ 256
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind
E804
Length = 324
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 105/237 (44%), Gaps = 32/237 (13%)
Query: 774 IGTGSSGVVYRVTIPNGETL-AVKKMWSSDESGAFSS---EIQTLGSIRHKNIVRLLGW- 828
+G G+ VY+ + L A+K++ E GA + E+ L ++H NIV L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 829 GSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILH 888
+ K+L L+F +YL + L L G + + + LAY H +LH
Sbjct: 70 HTEKSLTLVF-EYL-DKDLKQYLDDCGNIINMHNVKL-FLFQLLRGLAYCHRQ---KVLH 123
Query: 889 GDVKAMNVLLGPGYQAYLADFGLAR---IVSGSGDDNCSKTNQRPQ--LAGSYGYMAPEH 943
D+K N+L+ + LADFGLAR I + + D+ RP L GS Y
Sbjct: 124 RDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDY----- 178
Query: 944 ASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLMLNLEAEQT 1000
+ + D++ G + E+ TGR PL P G+ + + +F +L E+T
Sbjct: 179 ------STQIDMWGVGCIFYEMATGR-PLFP----GSTVEEQLHFIFRILGTPTEET 224
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 56/191 (29%), Positives = 86/191 (45%), Gaps = 20/191 (10%)
Query: 792 TLAVKKM---WSSDESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLL-FYDYLPNGS 846
T+AVK + + E A SE++ L I H N+V LLG + L+ ++ G+
Sbjct: 60 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 119
Query: 847 LSSLLHGAGKGGADW---EARYEVVLGVAHALAY-------LHHDCMPPILHGDVKAMNV 896
LS+ L + E Y+ L + H + Y + +H D+ A N+
Sbjct: 120 LSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 179
Query: 897 LLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVY 956
LL + DFGLAR + D K + R L +MAPE + T +SDV+
Sbjct: 180 LLSEKNVVKICDFGLARDIX-KDPDXVRKGDARLPLK----WMAPETIFDRVYTIQSDVW 234
Query: 957 SFGVVLLEVLT 967
SFGV+L E+ +
Sbjct: 235 SFGVLLWEIFS 245
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 24/195 (12%)
Query: 787 IPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841
I G+ +AVK ++ SS F E++ + + H NIV+L + L +Y
Sbjct: 36 ILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEY 94
Query: 842 LPNGSLSSLL--HGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLG 899
G + L HG K + EAR + + A+ Y H I+H D+KA N+LL
Sbjct: 95 ASGGEVFDYLVAHGRMK---EKEARAKF-RQIVSAVQYCHQKF---IVHRDLKAENLLLD 147
Query: 900 PGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRIT-EKSDVYSF 958
+ADFG + + + N+ GS Y APE ++ + DV+S
Sbjct: 148 ADMNIKIADFGFS--------NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSL 199
Query: 959 GVVLLEVLTGRHPLD 973
GV+L +++G P D
Sbjct: 200 GVILYTLVSGSLPFD 214
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 24/195 (12%)
Query: 787 IPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841
I G+ +AVK ++ SS F E++ + + H NIV+L + L +Y
Sbjct: 36 ILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEY 94
Query: 842 LPNGSLSSLL--HGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLG 899
G + L HG K + EAR + + A+ Y H I+H D+KA N+LL
Sbjct: 95 ASGGEVFDYLVAHGRMK---EKEARAKF-RQIVSAVQYCHQKF---IVHRDLKAENLLLD 147
Query: 900 PGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRIT-EKSDVYSF 958
+ADFG + + + N+ GS Y APE ++ + DV+S
Sbjct: 148 ADMNIKIADFGFS--------NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSL 199
Query: 959 GVVLLEVLTGRHPLD 973
GV+L +++G P D
Sbjct: 200 GVILYTLVSGSLPFD 214
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 92/224 (41%), Gaps = 30/224 (13%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIPNG-------------ETLAVKKMWSSDESGAFSSEI 811
+ N V+GTG+ G V+ V +G + V+K +++ + +E
Sbjct: 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHT---RTER 109
Query: 812 QTLGSIRHKNIVRLLGWGSNKNLKL-LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLG 870
Q L IR + L + KL L DY+ G L + L + +EV +
Sbjct: 110 QVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERF-----TEHEVQIY 164
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
V + L H I++ D+K N+LL L DFGL++ + +T +
Sbjct: 165 VGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSK------EFVADETERAY 218
Query: 931 QLAGSYGYMAPE--HASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
G+ YMAP+ + D +S GV++ E+LTG P
Sbjct: 219 DFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF 262
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 98/219 (44%), Gaps = 25/219 (11%)
Query: 770 SANVIGTGSSGVVY-RVTIPNGETLAVK---KMWSSDESGAFSSEIQTLGSIR-HKNIVR 824
++ ++G G+ V V++ NG+ AVK K S F E++TL + +KNI+
Sbjct: 17 TSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFR-EVETLYQCQGNKNILE 75
Query: 825 LLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
L+ + + L ++ L GS+ L H + + VV VA AL +LH
Sbjct: 76 LIEFFEDDTRFYLVFEKLQGGSI--LAHIQKQKHFNEREASRVVRDVAAALDFLH---TK 130
Query: 885 PILHGDVKAMNVLLGPGYQA---YLADFGLARIVSGSGDDNCSKTNQRPQL---AGSYGY 938
I H D+K N+L + + DF L SG +N P+L GS Y
Sbjct: 131 GIAHRDLKPENILCESPEKVSPVKICDFDLG---SGMKLNNSCTPITTPELTTPCGSAEY 187
Query: 939 MAPEHASM-----QRITEKSDVYSFGVVLLEVLTGRHPL 972
MAPE + ++ D++S GVVL +L+G P
Sbjct: 188 MAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 90/217 (41%), Gaps = 23/217 (10%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIPN-GETLAVKKMWSS-----DESGAFSSEIQTLG-SI 817
+ + ++G GS G V+ + A+K + D+ E + L +
Sbjct: 17 IEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 76
Query: 818 RHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARY--EVVLGVAHAL 875
H + + K +YL G L + K Y E++LG L
Sbjct: 77 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILG----L 132
Query: 876 AYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGS 935
+LH I++ D+K N+LL +ADFG+ + + GD +KTN+ G+
Sbjct: 133 QFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCK-ENMLGD---AKTNE---FCGT 182
Query: 936 YGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
Y+APE Q+ D +SFGV+L E+L G+ P
Sbjct: 183 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 18/167 (10%)
Query: 810 EIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLL--HGAGKGGADWEARYEV 867
E++ + + H NIV+L + L +Y G + L HG K + EAR +
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK---EKEARAKF 119
Query: 868 VLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927
+ A+ Y H I+H D+KA N+LL +ADFG + + + N
Sbjct: 120 -RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS--------NEFTFGN 167
Query: 928 QRPQLAGSYGYMAPEHASMQRIT-EKSDVYSFGVVLLEVLTGRHPLD 973
+ GS Y APE ++ + DV+S GV+L +++G P D
Sbjct: 168 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 49/169 (28%), Positives = 75/169 (44%), Gaps = 22/169 (13%)
Query: 810 EIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLL--HGAGKGGADWEARYEV 867
E++ + + H NIV+L + L +Y G + L HG K + EAR +
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMK---EKEARSKF 120
Query: 868 VLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLAR--IVSGSGDDNCSK 925
+ A+ Y H I+H D+KA N+LL +ADFG + V G D C
Sbjct: 121 -RQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFC-- 174
Query: 926 TNQRPQLAGSYGYMAPEHASMQRIT-EKSDVYSFGVVLLEVLTGRHPLD 973
G+ Y APE ++ + DV+S GV+L +++G P D
Sbjct: 175 --------GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 56/192 (29%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 792 TLAVKKM---WSSDESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLL-FYDYLPNGS 846
T+AVK + + E A SE++ L I H N+V LLG + L+ ++ G+
Sbjct: 50 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 109
Query: 847 LSSLLHGAGKGGADW----EARYEVVLGVAHALAY-------LHHDCMPPILHGDVKAMN 895
LS+ L + E Y+ L + H + Y + +H D+ A N
Sbjct: 110 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN 169
Query: 896 VLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDV 955
+LL + DFGLAR + D K + R L +MAPE + T +SDV
Sbjct: 170 ILLSEKNVVKICDFGLARDIX-KDPDXVRKGDARLPLK----WMAPETIFDRVYTIQSDV 224
Query: 956 YSFGVVLLEVLT 967
+SFGV+L E+ +
Sbjct: 225 WSFGVLLWEIFS 236
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 56/192 (29%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 792 TLAVKKM---WSSDESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLL-FYDYLPNGS 846
T+AVK + + E A SE++ L I H N+V LLG + L+ ++ G+
Sbjct: 59 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 118
Query: 847 LSSLLHGAGKGGADW----EARYEVVLGVAHALAY-------LHHDCMPPILHGDVKAMN 895
LS+ L + E Y+ L + H + Y + +H D+ A N
Sbjct: 119 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN 178
Query: 896 VLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDV 955
+LL + DFGLAR + D K + R L +MAPE + T +SDV
Sbjct: 179 ILLSEKNVVKICDFGLARDIX-KDPDXVRKGDARLPLK----WMAPETIFDRVYTIQSDV 233
Query: 956 YSFGVVLLEVLT 967
+SFGV+L E+ +
Sbjct: 234 WSFGVLLWEIFS 245
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 24/195 (12%)
Query: 787 IPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841
I G+ +AVK ++ SS F E++ + + H NIV+L + L +Y
Sbjct: 29 ILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEY 87
Query: 842 LPNGSLSSLL--HGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLG 899
G + L HG K + EAR + + A+ Y H I+H D+KA N+LL
Sbjct: 88 ASGGEVFDYLVAHGWMK---EKEARAKF-RQIVSAVQYCHQKF---IVHRDLKAENLLLD 140
Query: 900 PGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRIT-EKSDVYSF 958
+ADFG + + + N+ GS Y APE ++ + DV+S
Sbjct: 141 ADMNIKIADFGFS--------NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSL 192
Query: 959 GVVLLEVLTGRHPLD 973
GV+L +++G P D
Sbjct: 193 GVILYTLVSGSLPFD 207
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 56/192 (29%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 792 TLAVKKM---WSSDESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLL-FYDYLPNGS 846
T+AVK + + E A SE++ L I H N+V LLG + L+ ++ G+
Sbjct: 50 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGN 109
Query: 847 LSSLLHGAGKGGADW----EARYEVVLGVAHALAY-------LHHDCMPPILHGDVKAMN 895
LS+ L + E Y+ L + H + Y + +H D+ A N
Sbjct: 110 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN 169
Query: 896 VLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDV 955
+LL + DFGLAR + D K + R L +MAPE + T +SDV
Sbjct: 170 ILLSEKNVVKICDFGLARDIX-KDPDXVRKGDARLPLK----WMAPETIFDRVYTIQSDV 224
Query: 956 YSFGVVLLEVLT 967
+SFGV+L E+ +
Sbjct: 225 WSFGVLLWEIFS 236
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 25/217 (11%)
Query: 768 LTSANVIGTGSSGVVYR-----VTIPNGET-LAVKKM---WSSDESGAFSSEIQTLGSIR 818
+T + +G GS G+VY V ET +A+K + S E F +E +
Sbjct: 17 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN 76
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGAD--------WEARYEVVLG 870
++VRLLG S L+ + + G L S L A+ ++
Sbjct: 77 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGE 136
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+A +AYL+ + +H D+ A N ++ + + DFG+ R + + P
Sbjct: 137 IADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 193
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+M+PE T SDV+SFGVVL E+ T
Sbjct: 194 -----VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 24/208 (11%)
Query: 774 IGTGSSGVVY----RVT-IPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGW 828
+G+G+ G V +VT + + K S+ + E+ L + H NI++L +
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 829 GSNKNLKLLFYDYLPNGSL-SSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+K L + G L ++H D ++ V + YLH I+
Sbjct: 105 FEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV---IIKQVLSGVTYLHK---HNIV 158
Query: 888 HGDVKAMNVLLGPGYQAYL---ADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
H D+K N+LL + L DFGL+ + +N K +R G+ Y+APE
Sbjct: 159 HRDLKPENLLLESKEKDALIKIVDFGLSAVF-----ENQKKMKER---LGTAYYIAPE-V 209
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPL 972
++ EK DV+S GV+L +L G P
Sbjct: 210 LRKKYDEKCDVWSIGVILFILLAGYPPF 237
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 18/167 (10%)
Query: 810 EIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLL--HGAGKGGADWEARYEV 867
E++ + + H NIV+L + L +Y G + L HG K + EAR +
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK---EKEARAKF 120
Query: 868 VLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927
+ A+ Y H I+H D+KA N+LL +ADFG + + + N
Sbjct: 121 -RQIVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFS--------NEFTVGN 168
Query: 928 QRPQLAGSYGYMAPEHASMQRIT-EKSDVYSFGVVLLEVLTGRHPLD 973
+ GS Y APE ++ + DV+S GV+L +++G P D
Sbjct: 169 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 10/102 (9%)
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+A AL +LH I++ D+K N+LL L DFGL++ ++ +
Sbjct: 136 LALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK-------ESIDHEKKAY 185
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
G+ YMAPE + + T+ +D +SFGV++ E+LTG P
Sbjct: 186 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 227
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 10/102 (9%)
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+A AL +LH I++ D+K N+LL L DFGL++ ++ +
Sbjct: 135 LALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK-------ESIDHEKKAY 184
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
G+ YMAPE + + T+ +D +SFGV++ E+LTG P
Sbjct: 185 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 10/102 (9%)
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+A AL +LH I++ D+K N+LL L DFGL++ ++ +
Sbjct: 135 LALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK-------ESIDHEKKAY 184
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
G+ YMAPE + + T+ +D +SFGV++ E+LTG P
Sbjct: 185 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 56/192 (29%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 792 TLAVKKM---WSSDESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLL-FYDYLPNGS 846
T+AVK + + E A SE++ L I H N+V LLG + L+ ++ G+
Sbjct: 59 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 118
Query: 847 LSSLLHGAGKGGADW----EARYEVVLGVAHALAY-------LHHDCMPPILHGDVKAMN 895
LS+ L + E Y+ L + H + Y + +H D+ A N
Sbjct: 119 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN 178
Query: 896 VLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDV 955
+LL + DFGLAR + D K + R L +MAPE + T +SDV
Sbjct: 179 ILLSEKNVVKICDFGLARDIY-KDPDXVRKGDARLPLK----WMAPETIFDRVYTIQSDV 233
Query: 956 YSFGVVLLEVLT 967
+SFGV+L E+ +
Sbjct: 234 WSFGVLLWEIFS 245
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 57/210 (27%), Positives = 91/210 (43%), Gaps = 24/210 (11%)
Query: 773 VIGTGSSGVVY---RVTIPN-GETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVR 824
V+G GS G V+ +VT P+ G A+K + + + E L + H +V+
Sbjct: 35 VLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVK 94
Query: 825 LLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARY--EVVLGVAHALAYLHHDC 882
L + L D+L G L + L + Y E+ LG+ H LH
Sbjct: 95 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDH----LHS-- 148
Query: 883 MPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPE 942
I++ D+K N+LL L DFGL++ + + G+ YMAPE
Sbjct: 149 -LGIIYRDLKPENILLDEEGHIKLTDFGLSK-------EAIDHEKKAYSFCGTVEYMAPE 200
Query: 943 HASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
+ Q + +D +S+GV++ E+LTG P
Sbjct: 201 VVNRQGHSHSADWWSYGVLMFEMLTGSLPF 230
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 8/102 (7%)
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+ AL YLH I+H D+K N+LL + DFG A+++S SK +
Sbjct: 141 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQARAN 192
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
G+ Y++PE + + ++ SD+++ G ++ +++ G P
Sbjct: 193 SFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPF 234
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 83/217 (38%), Gaps = 31/217 (14%)
Query: 772 NVIGTGSSGVVYRVTIPNGETLAVKK------MWSSDESGAFSSEIQTLGSIRHKNIVRL 825
VIG G+ G V V + N + + K M E+ F E L + K I L
Sbjct: 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTL 139
Query: 826 LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARY---EVVLGV--AHALAYLHH 880
+ N L DY G L +LL + AR+ E+V+ + H L Y+H
Sbjct: 140 HYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHR 199
Query: 881 DCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMA 940
D +K N+L+ LADFG + G T Q G+ Y++
Sbjct: 200 D---------IKPDNILMDMNGHIRLADFGSCLKLMEDG------TVQSSVAVGTPDYIS 244
Query: 941 PE-----HASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
PE R + D +S GV + E+L G P
Sbjct: 245 PEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 25/217 (11%)
Query: 768 LTSANVIGTGSSGVVYR-----VTIPNGET-LAVKKM---WSSDESGAFSSEIQTLGSIR 818
+T + +G GS G+VY V ET +A+K + S E F +E +
Sbjct: 27 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN 86
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGAD--------WEARYEVVLG 870
++VRLLG S L+ + + G L S L A+ ++
Sbjct: 87 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGE 146
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+A +AYL+ + +H D+ A N ++ + + DFG+ R + + P
Sbjct: 147 IADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 203
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+M+PE T SDV+SFGVVL E+ T
Sbjct: 204 -----VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 33/229 (14%)
Query: 768 LTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLG-SIRHKNIVRLL 826
+ S ++G GSSG V G +AVK+M D EI+ L S H N++R
Sbjct: 35 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRML-IDFCDIALMEIKLLTESDDHPNVIRY- 92
Query: 827 GWGSNKNLKLLFYDY-LPNGSLSSLLHGAGKGGADWEARYE-----VVLGVAHALAYLHH 880
+ S + L+ L N +L L+ + + + E ++ +A +A+LH
Sbjct: 93 -YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 151
Query: 881 DCMPPILHGDVKAMNVLL-------------GPGYQAYLADFGLARIVSGSGDDNCSKTN 927
I+H D+K N+L+ + ++DFGL + + SG
Sbjct: 152 ---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD-SGQXXFRXNL 207
Query: 928 QRPQLAGSYGYMAP---EHASMQRITEKSDVYSFGVVLLEVLT-GRHPL 972
P +G+ G+ AP E ++ +R+T D++S G V +L+ G+HP
Sbjct: 208 NNP--SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 89/217 (41%), Gaps = 23/217 (10%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIPN-GETLAVKKMWSS-----DESGAFSSEIQTLG-SI 817
+ + ++G GS G V+ + A+K + D+ E + L +
Sbjct: 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 75
Query: 818 RHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARY--EVVLGVAHAL 875
H + + K +YL G L + K Y E++LG L
Sbjct: 76 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILG----L 131
Query: 876 AYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGS 935
+LH I++ D+K N+LL +ADFG+ + + GD +KTN G+
Sbjct: 132 QFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCK-ENMLGD---AKTNX---FCGT 181
Query: 936 YGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
Y+APE Q+ D +SFGV+L E+L G+ P
Sbjct: 182 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 29/215 (13%)
Query: 774 IGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFS----------SEIQTLGSIRHKNI 822
IG G+ G VY+ P +G +A+K + + G + ++ L + H N+
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 823 VRLLG----WGSNKNLKL-LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAY 877
VRL+ +++ +K+ L ++++ + L + L A G E +++ L +
Sbjct: 77 VRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 135
Query: 878 LHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYG 937
LH +C I+H D+K N+L+ G LADFGLARI S + P + +
Sbjct: 136 LHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS-------YQMALTPVVVTLW- 184
Query: 938 YMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
Y APE D++S G + E+ R PL
Sbjct: 185 YRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 218
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 26/227 (11%)
Query: 759 FSIDDVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVK----KMWSSDESGAFSSEIQ- 812
F +DV + +G+G +V + G+ A K + SS G EI+
Sbjct: 5 FRQEDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIER 64
Query: 813 ---TLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVL 869
L IRH NI+ L NK +L + + G L L A K + + +
Sbjct: 65 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKESLTEDEATQFLK 122
Query: 870 GVAHALAYLHHDCMPPILHGDVKAMNVLL----GPGYQAYLADFGLARIVSGSGDDNCSK 925
+ + YLH I H D+K N++L P + L DFG+A +
Sbjct: 123 QILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG------- 172
Query: 926 TNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
N+ + G+ ++APE + + + ++D++S GV+ +L+G P
Sbjct: 173 -NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 866 EVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSK 925
E+V V+ + YL +H D+ A NVLL + A ++DFGL++ + D+N K
Sbjct: 473 ELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRA--DENYYK 527
Query: 926 TNQRPQLAGSY--GYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
Q G + + APE + + + KSDV+SFGV++ E + G+ P
Sbjct: 528 A----QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 20/218 (9%)
Query: 762 DDVVRNLTSANVIGTGS-SGVVYRVTIPNGETLAVK---KMWSSDESGAFSSEIQTLGSI 817
+D+ + +GTG+ S VV G+ AVK K + + +EI L I
Sbjct: 18 EDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKI 77
Query: 818 RHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAY 877
+H+NIV L + N L + G L + KG + ++ V A+ Y
Sbjct: 78 KHENIVALEDIYESPNHLYLVMQLVSGGELFDRI--VEKGFYTEKDASTLIRQVLDAVYY 135
Query: 878 LHHDCMPPILHGDVKAMNVLL---GPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAG 934
LH I+H D+K N+L + ++DFGL+++ G GD + G
Sbjct: 136 LHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM-EGKGDVMST-------ACG 184
Query: 935 SYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
+ GY+APE + + ++ D +S GV+ +L G P
Sbjct: 185 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 222
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 26/219 (11%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTI-PNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKN-- 821
+ +L + +G+G+ G V+++ G +AVK+M S + L + +
Sbjct: 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDC 83
Query: 822 --IVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYL 878
IV+ G + +N ++ F G+ + L +G ++ + + AL YL
Sbjct: 84 PYIVQCFGTFITNTDV---FIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYL 140
Query: 879 HHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLA-RIVSGSGDDNCSKTNQRPQLAGSYG 937
++H DVK N+LL Q L DFG++ R+V D AG
Sbjct: 141 KEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS---------AGCAA 189
Query: 938 YMAPEHASMQRITE-----KSDVYSFGVVLLEVLTGRHP 971
YMAPE T+ ++DV+S G+ L+E+ TG+ P
Sbjct: 190 YMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 56/192 (29%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 792 TLAVKKM---WSSDESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLL-FYDYLPNGS 846
T+AVK + + E A SE++ L I H N+V LLG + L+ ++ G+
Sbjct: 61 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 120
Query: 847 LSSLLHGAGKGGADW----EARYEVVLGVAHALAY-------LHHDCMPPILHGDVKAMN 895
LS+ L + E Y+ L + H + Y + +H D+ A N
Sbjct: 121 LSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN 180
Query: 896 VLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDV 955
+LL + DFGLAR + D K + R L +MAPE + T +SDV
Sbjct: 181 ILLSEKNVVKICDFGLARDIY-KDPDYVRKGDARLPLK----WMAPETIFDRVYTIQSDV 235
Query: 956 YSFGVVLLEVLT 967
+SFGV+L E+ +
Sbjct: 236 WSFGVLLWEIFS 247
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 56/192 (29%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 792 TLAVKKM---WSSDESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLL-FYDYLPNGS 846
T+AVK + + E A SE++ L I H N+V LLG + L+ ++ G+
Sbjct: 59 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 118
Query: 847 LSSLLHGAGKGGADW----EARYEVVLGVAHALAY-------LHHDCMPPILHGDVKAMN 895
LS+ L + E Y+ L + H + Y + +H D+ A N
Sbjct: 119 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN 178
Query: 896 VLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDV 955
+LL + DFGLAR + D K + R L +MAPE + T +SDV
Sbjct: 179 ILLSEKNVVKICDFGLARDIY-KDPDYVRKGDARLPLK----WMAPETIFDRVYTIQSDV 233
Query: 956 YSFGVVLLEVLT 967
+SFGV+L E+ +
Sbjct: 234 WSFGVLLWEIFS 245
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 21/185 (11%)
Query: 796 KKMWSSDESGAFSSEIQ----TLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLL 851
K+ SS G EI+ L IRH NI+ L NK +L + + G L L
Sbjct: 40 KRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL 99
Query: 852 HGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLL----GPGYQAYLA 907
A K + + + + + YLH I H D+K N++L P + L
Sbjct: 100 --AEKESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLI 154
Query: 908 DFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
DFG+A + N+ + G+ ++APE + + + ++D++S GV+ +L+
Sbjct: 155 DFGIAHKIEAG--------NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 206
Query: 968 GRHPL 972
G P
Sbjct: 207 GASPF 211
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 866 EVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSK 925
E+V V+ + YL +H D+ A NVLL + A ++DFGL++ + D+N K
Sbjct: 474 ELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRA--DENYYK 528
Query: 926 TNQRPQLAGSY--GYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
Q G + + APE + + + KSDV+SFGV++ E + G+ P
Sbjct: 529 A----QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 24/195 (12%)
Query: 787 IPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841
I G+ +AVK ++ SS F E++ + + H NIV+L + L +Y
Sbjct: 36 ILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEY 94
Query: 842 LPNGSLSSLL--HGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLG 899
G + L HG K + EAR + + A+ Y H I+H D+KA N+LL
Sbjct: 95 ASGGEVFDYLVAHGRMK---EKEARAKF-RQIVSAVQYCHQKF---IVHRDLKAENLLLD 147
Query: 900 PGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRIT-EKSDVYSF 958
+ADFG + + + N+ G+ Y APE ++ + DV+S
Sbjct: 148 ADMNIKIADFGFS--------NEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSL 199
Query: 959 GVVLLEVLTGRHPLD 973
GV+L +++G P D
Sbjct: 200 GVILYTLVSGSLPFD 214
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 25/217 (11%)
Query: 768 LTSANVIGTGSSGVVYR-----VTIPNGET-LAVKKM---WSSDESGAFSSEIQTLGSIR 818
+T + +G GS G+VY V ET +A+K + S E F +E +
Sbjct: 21 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN 80
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGK--------GGADWEARYEVVLG 870
++VRLLG S L+ + + G L S L ++
Sbjct: 81 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 140
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+A +AYL+ + +H D+ A N ++ + + DFG+ R + + P
Sbjct: 141 IADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 197
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+M+PE T SDV+SFGVVL E+ T
Sbjct: 198 -----VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 33/229 (14%)
Query: 768 LTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLG-SIRHKNIVRLL 826
+ S ++G GSSG V G +AVK+M D EI+ L S H N++R
Sbjct: 35 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRML-IDFCDIALMEIKLLTESDDHPNVIRY- 92
Query: 827 GWGSNKNLKLLFYDY-LPNGSLSSLLHGAGKGGADWEARYE-----VVLGVAHALAYLHH 880
+ S + L+ L N +L L+ + + + E ++ +A +A+LH
Sbjct: 93 -YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 151
Query: 881 DCMPPILHGDVKAMNVLL-------------GPGYQAYLADFGLARIVSGSGDDNCSKTN 927
I+H D+K N+L+ + ++DFGL + + SG
Sbjct: 152 ---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD-SGQXXFRXNL 207
Query: 928 QRPQLAGSYGYMAP---EHASMQRITEKSDVYSFGVVLLEVLT-GRHPL 972
P +G+ G+ AP E ++ +R+T D++S G V +L+ G+HP
Sbjct: 208 NNP--SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 56/192 (29%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 792 TLAVKKM---WSSDESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLL-FYDYLPNGS 846
T+AVK + + E A SE++ L I H N+V LLG + L+ ++ G+
Sbjct: 50 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGN 109
Query: 847 LSSLLHGAGKGGADW----EARYEVVLGVAHALAY-------LHHDCMPPILHGDVKAMN 895
LS+ L + E Y+ L + H + Y + +H D+ A N
Sbjct: 110 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN 169
Query: 896 VLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDV 955
+LL + DFGLAR + D K + R L +MAPE + T +SDV
Sbjct: 170 ILLSEKNVVKICDFGLARDIY-KDPDYVRKGDARLPLK----WMAPETIFDRVYTIQSDV 224
Query: 956 YSFGVVLLEVLT 967
+SFGV+L E+ +
Sbjct: 225 WSFGVLLWEIFS 236
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 56/192 (29%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 792 TLAVKKM---WSSDESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLL-FYDYLPNGS 846
T+AVK + + E A SE++ L I H N+V LLG + L+ ++ G+
Sbjct: 50 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGN 109
Query: 847 LSSLLHGAGKGGADW----EARYEVVLGVAHALAY-------LHHDCMPPILHGDVKAMN 895
LS+ L + E Y+ L + H + Y + +H D+ A N
Sbjct: 110 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN 169
Query: 896 VLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDV 955
+LL + DFGLAR + D K + R L +MAPE + T +SDV
Sbjct: 170 ILLSEKNVVKICDFGLARDIY-KDPDYVRKGDARLPLK----WMAPETIFDRVYTIQSDV 224
Query: 956 YSFGVVLLEVLT 967
+SFGV+L E+ +
Sbjct: 225 WSFGVLLWEIFS 236
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 17/123 (13%)
Query: 866 EVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSK 925
++ + + AL +LH ++H DVK NVL+ Q + DFG +SG D+ +K
Sbjct: 113 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFG----ISGYLVDDVAK 166
Query: 926 TNQRPQLAGSYGYMAPE----HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAP 981
AG YMAPE + + + KSD++S G+ ++E+ R P D G P
Sbjct: 167 DID----AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSW---GTP 219
Query: 982 LVQ 984
Q
Sbjct: 220 FQQ 222
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 23/208 (11%)
Query: 774 IGTGSSGVVYR-VTIPNGETLAVK----KMWSSDESGAFSSEIQTLGSIRHKNIVRLLGW 828
+G G+ VV R V G A K K S+ + E + ++H NIVRL
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 829 GSNKNLKLLFYDYLPNGSL-SSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
++ L +D + G L ++ AD + +L ++AY H + I+
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL---ESIAYCHSN---GIV 127
Query: 888 HGDVKAMNVLLGP---GYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
H ++K N+LL G LADFGLA V+ S AG+ GY++PE
Sbjct: 128 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS--------EAWHGFAGTPGYLSPEVL 179
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPL 972
++ D+++ GV+L +L G P
Sbjct: 180 KKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 23/208 (11%)
Query: 774 IGTGSSGVVYR-VTIPNGETLAVK----KMWSSDESGAFSSEIQTLGSIRHKNIVRLLGW 828
+G G+ VV R V G A K K S+ + E + ++H NIVRL
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 829 GSNKNLKLLFYDYLPNGSL-SSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
++ L +D + G L ++ AD + +L ++AY H + I+
Sbjct: 73 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL---ESIAYCHSN---GIV 126
Query: 888 HGDVKAMNVLLGP---GYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
H ++K N+LL G LADFGLA V+ S AG+ GY++PE
Sbjct: 127 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS--------EAWHGFAGTPGYLSPEVL 178
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPL 972
++ D+++ GV+L +L G P
Sbjct: 179 KKDPYSKPVDIWACGVILYILLVGYPPF 206
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 23/208 (11%)
Query: 774 IGTGSSGVVYR-VTIPNGETLAVK----KMWSSDESGAFSSEIQTLGSIRHKNIVRLLGW 828
+G G+ VV R V G A K K S+ + E + ++H NIVRL
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 829 GSNKNLKLLFYDYLPNGSL-SSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
++ L +D + G L ++ AD + +L ++AY H + I+
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL---ESIAYCHSN---GIV 127
Query: 888 HGDVKAMNVLLGP---GYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
H ++K N+LL G LADFGLA V+ S AG+ GY++PE
Sbjct: 128 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS--------EAWHGFAGTPGYLSPEVL 179
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPL 972
++ D+++ GV+L +L G P
Sbjct: 180 KKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 91/218 (41%), Gaps = 33/218 (15%)
Query: 774 IGTGSSGVVYRVTIPNGET-LAVKKMWSSD-ESGAFS--------------SEIQTLGSI 817
+G+G+ G V NG + A+K + S + G +S +EI L S+
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 818 RHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAY 877
H NI++L +K L ++ G L + K A ++ + + Y
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAAN--IMKQILSGICY 161
Query: 878 LHHDCMPPILHGDVKAMNVLLGPG---YQAYLADFGLARIVSGSGDDNCSKTNQRPQLAG 934
LH I+H D+K N+LL + DFGL+ S R +L
Sbjct: 162 LHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD-------YKLRDRLGT 211
Query: 935 SYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
+Y Y+APE ++ EK DV+S GV++ +L G P
Sbjct: 212 AY-YIAPE-VLKKKYNEKCDVWSCGVIMYILLCGYPPF 247
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 25/217 (11%)
Query: 768 LTSANVIGTGSSGVVYR-----VTIPNGET-LAVKKM---WSSDESGAFSSEIQTLGSIR 818
+T + +G GS G+VY V ET +A+K + S E F +E +
Sbjct: 12 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN 71
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGK--------GGADWEARYEVVLG 870
++VRLLG S L+ + + G L S L ++
Sbjct: 72 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 131
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+A +AYL+ + +H D+ A N ++ + + DFG+ R + + P
Sbjct: 132 IADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 188
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+M+PE T SDV+SFGVVL E+ T
Sbjct: 189 -----VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 55/186 (29%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 790 GETLAVKKMWSS---DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLK--LLFYDYLPN 844
GE +AVK + + EI+ L ++ H++IV+ G ++ K L +Y+P
Sbjct: 37 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 96
Query: 845 GSLSSLL--HGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGY 902
GSL L H G A+ + +AYLH +H + A NVLL
Sbjct: 97 GSLRDYLPRHCVGLAQLLLFAQQ-----ICEGMAYLHAQ---HYIHRALAARNVLLDNDR 148
Query: 903 QAYLADFGLARIV-SGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVV 961
+ DFGLA+ V G + P + APE + SDV+SFGV
Sbjct: 149 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVF-----WYAPECLKECKFYYASDVWSFGVT 203
Query: 962 LLEVLT 967
L E+LT
Sbjct: 204 LYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 55/186 (29%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 790 GETLAVKKMWSS---DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLK--LLFYDYLPN 844
GE +AVK + + EI+ L ++ H++IV+ G ++ K L +Y+P
Sbjct: 38 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 97
Query: 845 GSLSSLL--HGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGY 902
GSL L H G A+ + +AYLH +H + A NVLL
Sbjct: 98 GSLRDYLPRHCVGLAQLLLFAQQ-----ICEGMAYLHAQ---HYIHRALAARNVLLDNDR 149
Query: 903 QAYLADFGLARIV-SGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVV 961
+ DFGLA+ V G + P + APE + SDV+SFGV
Sbjct: 150 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVF-----WYAPECLKECKFYYASDVWSFGVT 204
Query: 962 LLEVLT 967
L E+LT
Sbjct: 205 LYELLT 210
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 90/213 (42%), Gaps = 23/213 (10%)
Query: 768 LTSANVIGTGSSGVVYRVT-IPNGETLAVK--KMWSSDESGAFSSEIQTLGSIRHKNIVR 824
++ ++G G G V++ G LA K K + +EI + + H N+++
Sbjct: 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQ 150
Query: 825 LLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
L +KN +L +Y+ G L + + + +L + + H
Sbjct: 151 LYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTE----LDTILFMKQICEGIRHMHQM 206
Query: 885 PILHGDVKAMNVLL--GPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYG---YM 939
ILH D+K N+L Q + DFGLAR + R +L ++G ++
Sbjct: 207 YILHLDLKPENILCVNRDAKQIKIIDFGLAR-----------RYKPREKLKVNFGTPEFL 255
Query: 940 APEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
APE + ++ +D++S GV+ +L+G P
Sbjct: 256 APEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPF 288
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 54/211 (25%), Positives = 89/211 (42%), Gaps = 25/211 (11%)
Query: 774 IGTGSSGVVYRVT---IPNGET---LAVKKMWSS---DESGAFSSEIQTLGSIRHKNIVR 824
+G GS G+VY I GE +AVK + S E F +E + ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 825 LLGWGSNKNLKLLFYDYLPNGSLSSLL--------HGAGKGGADWEARYEVVLGVAHALA 876
LLG S L+ + + +G L S L + G+ + ++ +A +A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 877 YLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSY 936
YL+ +H ++ A N ++ + + DFG+ R + + P
Sbjct: 145 YLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP-----V 196
Query: 937 GYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+MAPE T SD++SFGVVL E+ +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 101/238 (42%), Gaps = 37/238 (15%)
Query: 763 DVVRNLTSANVIGTGSSGVVYRVTI-PNGETLAVKKMWSSDESGAFSS----EIQTLGSI 817
DV T+ + IG G+ G+V N +A+KK+ S E + EI+ L
Sbjct: 40 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRF 98
Query: 818 RHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAG----------KGGADWEARYEV 867
RH+NI+ G N ++ + + + L + L GA Y++
Sbjct: 99 RHENII-----GINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQI 153
Query: 868 VLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927
+ G L Y+H +LH D+K N+LL + DFGLAR+ D + T
Sbjct: 154 LRG----LKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARV----ADPDHDHTG 202
Query: 928 QRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQ 984
+ + Y APE + + T+ D++S G +L E+L+ R P PG L Q
Sbjct: 203 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPGKHYLDQ 256
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 105/258 (40%), Gaps = 38/258 (14%)
Query: 767 NLTSANVIGTGSSGVVYRVTI------PNGETLAVKKMWSS---DESGAFSSEIQTLGSI 817
L+ +G G+ G V T T+AVK + S E A SE++ L +
Sbjct: 40 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 99
Query: 818 -RHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVV-------- 868
H NIV LLG + L+ +Y G L + L + ++
Sbjct: 100 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 159
Query: 869 --------LGVAHALAYL-HHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919
VA +A+L +C +H D+ A N+LL G + DFGLAR +
Sbjct: 160 LEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDS 215
Query: 920 DDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTLPG 978
+ K N R + +MAPE T +SDV+S+G+ L E+ + G P P +P
Sbjct: 216 -NYVVKGNARLPVK----WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY-PGMPV 269
Query: 979 GAPLVQWTPLMFLMLNLE 996
+ + F ML+ E
Sbjct: 270 DSKFYKMIKEGFRMLSPE 287
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 89/218 (40%), Gaps = 25/218 (11%)
Query: 767 NLTSANVIGTGSSGVVYR-----VTIPNGET-LAVKKM---WSSDESGAFSSEIQTLGSI 817
+T + +G GS G+VY V ET +A+K + S E F +E +
Sbjct: 48 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF 107
Query: 818 RHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGAD--------WEARYEVVL 869
++VRLLG S L+ + + G L S L + ++
Sbjct: 108 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 167
Query: 870 GVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQR 929
+A +AYL+ + +H D+ A N ++ + + DFG+ R + +
Sbjct: 168 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 224
Query: 930 PQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
P +M+PE T SDV+SFGVVL E+ T
Sbjct: 225 P-----VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 99/227 (43%), Gaps = 36/227 (15%)
Query: 774 IGTGSSGVVYRVT----IPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWG 829
IG G+ VY T + E +A+K + + ++E+Q L ++ V + +
Sbjct: 29 IGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYC 88
Query: 830 SNKNLKLLF-YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILH 888
KN ++ YL + S +L+ ++ E +L + AL +H I+H
Sbjct: 89 FRKNDHVVIAMPYLEHESFLDILNSLS-----FQEVREYMLNLFKALKRIHQF---GIVH 140
Query: 889 GDVKAMNVLLGPGYQAY-LADFGLAR------------IVSGSGDDNCSKTN------QR 929
DVK N L + Y L DFGLA+ + S + + CS+ +R
Sbjct: 141 RDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRR 200
Query: 930 PQLA---GSYGYMAPEH-ASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
Q+A G+ G+ APE T D++S GV+ L +L+GR+P
Sbjct: 201 QQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 102/233 (43%), Gaps = 29/233 (12%)
Query: 757 LDFSIDDVVRN--LTSANVIGTGSSGVVYR-VTIPNGETLAVK-----KMWSSDESGAFS 808
LD + DDV+ VIG G+ VV R + G+ AVK K SS G +
Sbjct: 13 LDMADDDVLFEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSS--PGLST 70
Query: 809 SEIQTLGSI----RHKNIVRLLGWGSNKNLKLLFYDYLPNGSLS-SLLHGAGKGGADWEA 863
+++ SI +H +IV LL S+ + + ++++ L ++ A G EA
Sbjct: 71 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEA 130
Query: 864 -RYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQA---YLADFGLARIVSGSG 919
+ + AL Y H + I+H DVK NVLL + L DFG+A + SG
Sbjct: 131 VASHYMRQILEALRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESG 187
Query: 920 DDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
+ G+ +MAPE + + DV+ GV+L +L+G P
Sbjct: 188 LVAGGRV-------GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 116/285 (40%), Gaps = 44/285 (15%)
Query: 741 NSFTADDTWEMTLYQKLDFSIDDVVRN-LTSANVIGTGSSGVVYRVTI------PNGETL 793
N++ D ++ K +F RN L+ +G G+ G V T T+
Sbjct: 2 NNYVYIDPTQLPYDHKWEFP-----RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTV 56
Query: 794 AVKKMWSS---DESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSS 849
AVK + S E A SE++ L + H NIV LLG + L+ +Y G L +
Sbjct: 57 AVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLN 116
Query: 850 LLHGAGKGGADWEARYEVV----------------LGVAHALAYL-HHDCMPPILHGDVK 892
L + ++ VA +A+L +C +H D+
Sbjct: 117 FLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLA 172
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
A N+LL G + DFGLAR + + K N R + +MAPE T +
Sbjct: 173 ARNILLTHGRITKICDFGLARDIKNDS-NYVVKGNARLPVK----WMAPESIFNCVYTFE 227
Query: 953 SDVYSFGVVLLEVLT-GRHPLDPTLPGGAPLVQWTPLMFLMLNLE 996
SDV+S+G+ L E+ + G P P +P + + F ML+ E
Sbjct: 228 SDVWSYGIFLWELFSLGSSPY-PGMPVDSKFYKMIKEGFRMLSPE 271
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 92/221 (41%), Gaps = 36/221 (16%)
Query: 772 NVIGTGSSGVVYRVTIPNGETLAVKKMWSS---------DESGAFSSEIQTLGSIRHKNI 822
+++G GS G V V + ETL + + + EIQ L +RHKN+
Sbjct: 11 DLLGEGSYGKVKEVL--DSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNV 68
Query: 823 VRLLG--WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAH------A 874
++L+ + K + +Y G + +L E R+ V +
Sbjct: 69 IQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVP------EKRFPVCQAHGYFCQLIDG 121
Query: 875 LAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAG 934
L YLH I+H D+K N+LL G ++ G+A + D+ +T+Q G
Sbjct: 122 LEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQ-----G 173
Query: 935 SYGYMAPEHASMQRITE--KSDVYSFGVVLLEVLTGRHPLD 973
S + PE A+ K D++S GV L + TG +P +
Sbjct: 174 SPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 50.1 bits (118), Expect = 7e-06, Method: Composition-based stats.
Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 28/197 (14%)
Query: 787 IPNGETLAVKKMWSSDESGAFSSEIQTL-------GSIRHKNIVRLLGWGSNKNLKLLFY 839
I G+ +AVK + D++ SS +Q L + H NIV+L + L
Sbjct: 36 ILTGKEVAVKII---DKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVX 92
Query: 840 DYLPNGSLSSLL--HGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVL 897
+Y G + L HG K + EAR + + A+ Y H I+H D+KA N+L
Sbjct: 93 EYASGGEVFDYLVAHGRXK---EKEARAKF-RQIVSAVQYCHQKF---IVHRDLKAENLL 145
Query: 898 LGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRIT-EKSDVY 956
L +ADFG + + + N+ G+ Y APE ++ + DV+
Sbjct: 146 LDADXNIKIADFGFS--------NEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVW 197
Query: 957 SFGVVLLEVLTGRHPLD 973
S GV+L +++G P D
Sbjct: 198 SLGVILYTLVSGSLPFD 214
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 49.7 bits (117), Expect = 8e-06, Method: Composition-based stats.
Identities = 54/211 (25%), Positives = 89/211 (42%), Gaps = 25/211 (11%)
Query: 774 IGTGSSGVVYRVT---IPNGET---LAVKKMWSS---DESGAFSSEIQTLGSIRHKNIVR 824
+G GS G+VY I GE +AVK + S E F +E + ++VR
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 825 LLGWGSNKNLKLLFYDYLPNGSLSSLL--------HGAGKGGADWEARYEVVLGVAHALA 876
LLG S L+ + + +G L S L + G+ + ++ +A +A
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 877 YLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSY 936
YL+ +H ++ A N ++ + + DFG+ R + + P
Sbjct: 146 YLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP-----V 197
Query: 937 GYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+MAPE T SD++SFGVVL E+ +
Sbjct: 198 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 49.7 bits (117), Expect = 8e-06, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+ AL YLH I+H D+K N+LL + DFG A+++S SK +
Sbjct: 138 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQARAN 189
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
G+ Y++PE + + + SD+++ G ++ +++ G P
Sbjct: 190 SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 49.7 bits (117), Expect = 8e-06, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+ AL YLH I+H D+K N+LL + DFG A+++S SK +
Sbjct: 142 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQARAN 193
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
G+ Y++PE + + + SD+++ G ++ +++ G P
Sbjct: 194 SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 103/243 (42%), Gaps = 41/243 (16%)
Query: 754 YQKLDFSIDDVVRNLTSANVIGTGSSGVVYRVTIPN-GETLAVKKMWSSDESGAFS---- 808
Y+KLDF +G G VY+ N + +A+KK+ S A
Sbjct: 12 YEKLDF--------------LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINR 57
Query: 809 ---SEIQTLGSIRHKNIVRLL-GWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR 864
EI+ L + H NI+ LL +G N+ L+F D++ L ++ +
Sbjct: 58 TALREIKLLQELSHPNIIGLLDAFGHKSNISLVF-DFM-ETDLEVIIKDNSLVLTPSHIK 115
Query: 865 YEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
+++ + L YLH ILH D+K N+LL LADFGLA+ G N +
Sbjct: 116 AYMLMTL-QGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAK---SFGSPNRA 168
Query: 925 KTNQRPQLAGSYGYMAPEHASMQRITEKS-DVYSFGVVLLEVLTGRHPLDPTLPGGAPLV 983
+Q + Y APE R+ D+++ G +L E+L P LPG + L
Sbjct: 169 YXHQ----VVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRV----PFLPGDSDLD 220
Query: 984 QWT 986
Q T
Sbjct: 221 QLT 223
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 70/148 (47%), Gaps = 16/148 (10%)
Query: 774 IGTGSSGVVYRVTIPNGET---LAVKKM-WSSDESGAFSS---EIQTLGSIRHKNIVRLL 826
IG G+ G V++ N ET +A+K++ D+ G SS EI L ++HKNIVRL
Sbjct: 10 IGEGTYGTVFKAK--NRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 827 G-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPP 885
S+K L L+F + L G D E + + L + H
Sbjct: 68 DVLHSDKKLTLVFE--FCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSR---N 121
Query: 886 ILHGDVKAMNVLLGPGYQAYLADFGLAR 913
+LH D+K N+L+ + LA+FGLAR
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLAR 149
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 116/285 (40%), Gaps = 44/285 (15%)
Query: 741 NSFTADDTWEMTLYQKLDFSIDDVVRN-LTSANVIGTGSSGVVYRVTI------PNGETL 793
N++ D ++ K +F RN L+ +G G+ G V T T+
Sbjct: 25 NNYVYIDPTQLPYDHKWEFP-----RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTV 79
Query: 794 AVKKMWSS---DESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSS 849
AVK + S E A SE++ L + H NIV LLG + L+ +Y G L +
Sbjct: 80 AVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLN 139
Query: 850 LLHGAGKGGADWEARYEVV----------------LGVAHALAYL-HHDCMPPILHGDVK 892
L + ++ VA +A+L +C +H D+
Sbjct: 140 FLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLA 195
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
A N+LL G + DFGLAR + + K N R + +MAPE T +
Sbjct: 196 ARNILLTHGRITKICDFGLARDIKNDS-NYVVKGNARLPVK----WMAPESIFNCVYTFE 250
Query: 953 SDVYSFGVVLLEVLT-GRHPLDPTLPGGAPLVQWTPLMFLMLNLE 996
SDV+S+G+ L E+ + G P P +P + + F ML+ E
Sbjct: 251 SDVWSYGIFLWELFSLGSSPY-PGMPVDSKFYKMIKEGFRMLSPE 294
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 49.7 bits (117), Expect = 8e-06, Method: Composition-based stats.
Identities = 61/213 (28%), Positives = 89/213 (41%), Gaps = 32/213 (15%)
Query: 774 IGTGSSGVVYR-VTIPNGETLAVK----KMWSSDESGAFSSEIQTLGSIRHKNIVRLLGW 828
+G G+ VV R V + G+ A K K S+ + E + ++H NIVRL
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 829 GSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR-YEVVLGVAHAL-----AYLHHDC 882
S + L +D + G L D AR Y +H + A LH
Sbjct: 90 ISEEGHHYLIFDLVTGGELFE----------DIVAREYYSEADASHCIQQILEAVLHCHQ 139
Query: 883 MPPILHGDVKAMNVLLGP---GYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
M ++H D+K N+LL G LADFGLA V G + AG+ GY+
Sbjct: 140 MG-VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEG-------EQQAWFGFAGTPGYL 191
Query: 940 APEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
+PE + D+++ GV+L +L G P
Sbjct: 192 SPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 224
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 49.7 bits (117), Expect = 8e-06, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+ AL YLH I+H D+K N+LL + DFG A+++S SK +
Sbjct: 141 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQARAN 192
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
G+ Y++PE + + + SD+++ G ++ +++ G P
Sbjct: 193 XFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 103/235 (43%), Gaps = 32/235 (13%)
Query: 755 QKLDFSIDDVV--RNL-TSANVIGTGSSGVVYRVTIPNGE----TLAVKKMW----SSDE 803
++L ++DVV RNL ++G G G V + + +AVK M S E
Sbjct: 20 EELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQRE 79
Query: 804 SGAFSSEIQTLGSIRHKNIVRLLG-------WGSNKNLKLLFYDYLPNGSLSS-LLHGAG 855
F SE + H N++RLLG G K + +L ++ G L + LL+
Sbjct: 80 IEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVIL--PFMKYGDLHTYLLYSRL 137
Query: 856 KGGAD---WEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLA 912
+ G + + ++ +A + YL + LH D+ A N +L +ADFGL+
Sbjct: 138 ETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLS 194
Query: 913 RIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+ + + + P ++A E + + T KSDV++FGV + E+ T
Sbjct: 195 KKIYSGDYYRQGRIAKMP-----VKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 89/229 (38%), Gaps = 25/229 (10%)
Query: 767 NLTSANVIGTGSSGVVYRVT-IPNGETLAVKKMWSSDESG--AFSSEIQTLGSIR-HKNI 822
L V+ G VY + +G A+K++ S++E A E+ + + H NI
Sbjct: 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNI 88
Query: 823 VRLLGWGS-------NKNLKLLFYDYLPNGSLSSLLHG-AGKGGADWEARYEVVLGVAHA 874
V+ S + L L G L L +G + ++ A
Sbjct: 89 VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRA 148
Query: 875 LAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAG 934
+ ++H PPI+H D+K N+LL L DFG A +S D + S QR L
Sbjct: 149 VQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSA--QRRALVE 205
Query: 935 SY-------GYMAPEHASMQR---ITEKSDVYSFGVVLLEVLTGRHPLD 973
Y PE + I EK D+++ G +L + +HP +
Sbjct: 206 EEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE 254
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 102/246 (41%), Gaps = 53/246 (21%)
Query: 763 DVVRNLTSANVIGTGSSGVVYRVTI-PNGETLAVKKMWSSDESGAFSS----EIQTLGSI 817
DV T+ + IG G+ G+V N +A+KK+ S E + EI+ L +
Sbjct: 22 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLAF 80
Query: 818 RHKNIV------RLLGWGSNKNL------------KLLFYDYLPNGSLSSLLHGAGKGGA 859
RH+NI+ R K++ KLL +L N + L
Sbjct: 81 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------- 132
Query: 860 DWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919
Y+++ G L Y+H +LH D+K N+LL + DFGLAR+
Sbjct: 133 -----YQILRG----LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV----A 176
Query: 920 DDNCSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978
D + T + + Y APE + + T+ D++S G +L E+L+ R P PG
Sbjct: 177 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPG 232
Query: 979 GAPLVQ 984
L Q
Sbjct: 233 KHYLDQ 238
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 17/167 (10%)
Query: 810 EIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVL 869
E+ L IRH NI+ L NK +L + + G L L A K + + +
Sbjct: 79 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKESLTEDEATQFLK 136
Query: 870 GVAHALAYLHHDCMPPILHGDVKAMNVLL----GPGYQAYLADFGLARIVSGSGDDNCSK 925
+ + YLH I H D+K N++L P + L DFG+A +
Sbjct: 137 QILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG------- 186
Query: 926 TNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
N+ + G+ ++APE + + + ++D++S GV+ +L+G P
Sbjct: 187 -NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 232
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+ AL YLH I+H D+K N+LL + DFG A+++S SK +
Sbjct: 118 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQARAN 169
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
G+ Y++PE + + + SD+++ G ++ +++ G P
Sbjct: 170 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 211
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+ AL YLH I+H D+K N+LL + DFG A+++S SK +
Sbjct: 119 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQARAN 170
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
G+ Y++PE + + + SD+++ G ++ +++ G P
Sbjct: 171 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 212
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+ AL YLH I+H D+K N+LL + DFG A+++S SK +
Sbjct: 117 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQARAN 168
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
G+ Y++PE + + + SD+++ G ++ +++ G P
Sbjct: 169 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 210
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+ AL YLH I+H D+K N+LL + DFG A+++S SK +
Sbjct: 116 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQARAN 167
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
G+ Y++PE + + + SD+++ G ++ +++ G P
Sbjct: 168 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 209
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+ AL YLH I+H D+K N+LL + DFG A+++S SK +
Sbjct: 139 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQARAN 190
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
G+ Y++PE + + + SD+++ G ++ +++ G P
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+ AL YLH I+H D+K N+LL + DFG A+++S SK +
Sbjct: 141 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQARAN 192
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
G+ Y++PE + + + SD+++ G ++ +++ G P
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+ AL YLH I+H D+K N+LL + DFG A+++S SK +
Sbjct: 141 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQARAN 192
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
G+ Y++PE + + + SD+++ G ++ +++ G P
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+ AL YLH I+H D+K N+LL + DFG A+++S SK +
Sbjct: 123 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQARAN 174
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
G+ Y++PE + + + SD+++ G ++ +++ G P
Sbjct: 175 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 216
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+ AL YLH I+H D+K N+LL + DFG A+++S SK +
Sbjct: 146 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQARAN 197
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
G+ Y++PE + + + SD+++ G ++ +++ G P
Sbjct: 198 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 239
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+ AL YLH I+H D+K N+LL + DFG A+++S SK +
Sbjct: 138 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQARAN 189
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
G+ Y++PE + + + SD+++ G ++ +++ G P
Sbjct: 190 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+ AL YLH I+H D+K N+LL + DFG A+++S SK +
Sbjct: 139 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQARAN 190
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
G+ Y++PE + + + SD+++ G ++ +++ G P
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+ AL YLH I+H D+K N+LL + DFG A+++S SK +
Sbjct: 139 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQARAN 190
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
G+ Y++PE + + + SD+++ G ++ +++ G P
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+ AL YLH I+H D+K N+LL + DFG A+++S SK +
Sbjct: 142 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQARAN 193
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
G+ Y++PE + + + SD+++ G ++ +++ G P
Sbjct: 194 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+ AL YLH I+H D+K N+LL + DFG A+++S SK +
Sbjct: 141 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQARAN 192
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
G+ Y++PE + + + SD+++ G ++ +++ G P
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+ AL YLH I+H D+K N+LL + DFG A+++S SK +
Sbjct: 144 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQARAN 195
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
G+ Y++PE + + + SD+++ G ++ +++ G P
Sbjct: 196 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 237
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+ AL YLH I+H D+K N+LL + DFG A+++S SK +
Sbjct: 141 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQARAN 192
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
G+ Y++PE + + + SD+++ G ++ +++ G P
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 116/285 (40%), Gaps = 44/285 (15%)
Query: 741 NSFTADDTWEMTLYQKLDFSIDDVVRN-LTSANVIGTGSSGVVYRVTI------PNGETL 793
N++ D ++ K +F RN L+ +G G+ G V T T+
Sbjct: 25 NNYVYIDPTQLPYDHKWEFP-----RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTV 79
Query: 794 AVKKMWSS---DESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSS 849
AVK + S E A SE++ L + H NIV LLG + L+ +Y G L +
Sbjct: 80 AVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLN 139
Query: 850 LLHGAGKGGADWEARYEVV----------------LGVAHALAYL-HHDCMPPILHGDVK 892
L + ++ VA +A+L +C +H D+
Sbjct: 140 FLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLA 195
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
A N+LL G + DFGLAR + + K N R + +MAPE T +
Sbjct: 196 ARNILLTHGRITKICDFGLARHIKNDS-NYVVKGNARLPVK----WMAPESIFNCVYTFE 250
Query: 953 SDVYSFGVVLLEVLT-GRHPLDPTLPGGAPLVQWTPLMFLMLNLE 996
SDV+S+G+ L E+ + G P P +P + + F ML+ E
Sbjct: 251 SDVWSYGIFLWELFSLGSSPY-PGMPVDSKFYKMIKEGFRMLSPE 294
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+ AL YLH I+H D+K N+LL + DFG A+++S SK +
Sbjct: 139 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQARAN 190
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
G+ Y++PE + + + SD+++ G ++ +++ G P
Sbjct: 191 AFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 100/246 (40%), Gaps = 53/246 (21%)
Query: 763 DVVRNLTSANVIGTGSSGVVYRVTI-PNGETLAVKKMWSSDESGAFSS----EIQTLGSI 817
DV T+ + IG G+ G+V N +A+KK+ S E + EI+ L
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRF 78
Query: 818 RHKNIV------RLLGWGSNKNL------------KLLFYDYLPNGSLSSLLHGAGKGGA 859
RH+NI+ R K++ KLL +L N + L
Sbjct: 79 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------- 130
Query: 860 DWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919
Y+++ G L Y+H +LH D+K N+LL + DFGLAR+
Sbjct: 131 -----YQILRG----LKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH 178
Query: 920 DDNCSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978
D T + + Y APE + + T+ D++S G +L E+L+ R P PG
Sbjct: 179 DHTGFLT----EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPG 230
Query: 979 GAPLVQ 984
L Q
Sbjct: 231 KHYLDQ 236
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 866 EVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSK 925
E+V V+ + YL +H D+ A NVLL + A ++DFGL++ + D+N K
Sbjct: 115 ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRA--DENXYK 169
Query: 926 TNQRPQLAGSY--GYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
Q G + + APE + + + KSDV+SFGV++ E + G+ P
Sbjct: 170 A----QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 116/285 (40%), Gaps = 44/285 (15%)
Query: 741 NSFTADDTWEMTLYQKLDFSIDDVVRN-LTSANVIGTGSSGVVYRVTI------PNGETL 793
N++ D ++ K +F RN L+ +G G+ G V T T+
Sbjct: 20 NNYVYIDPTQLPYDHKWEFP-----RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTV 74
Query: 794 AVKKMWSS---DESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSS 849
AVK + S E A SE++ L + H NIV LLG + L+ +Y G L +
Sbjct: 75 AVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLN 134
Query: 850 LLHGAGKGGADWEARYEVV----------------LGVAHALAYL-HHDCMPPILHGDVK 892
L + ++ VA +A+L +C +H D+
Sbjct: 135 FLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLA 190
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
A N+LL G + DFGLAR + + K N R + +MAPE T +
Sbjct: 191 ARNILLTHGRITKICDFGLARDIKNDS-NYVVKGNARLPVK----WMAPESIFNCVYTFE 245
Query: 953 SDVYSFGVVLLEVLT-GRHPLDPTLPGGAPLVQWTPLMFLMLNLE 996
SDV+S+G+ L E+ + G P P +P + + F ML+ E
Sbjct: 246 SDVWSYGIFLWELFSLGSSPY-PGMPVDSKFYKMIKEGFRMLSPE 289
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 101/246 (41%), Gaps = 53/246 (21%)
Query: 763 DVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSI 817
DV T+ + IG G+ G+V N +A+KK+ S E + EI+ L
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRF 82
Query: 818 RHKNIV------RLLGWGSNKNL------------KLLFYDYLPNGSLSSLLHGAGKGGA 859
RH+NI+ R K++ KLL +L N + L
Sbjct: 83 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------- 134
Query: 860 DWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919
Y+++ G L Y+H +LH D+K N+LL + DFGLAR+
Sbjct: 135 -----YQILRG----LKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARV----A 178
Query: 920 DDNCSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978
D + T + + Y APE + + T+ D++S G +L E+L+ R P PG
Sbjct: 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPG 234
Query: 979 GAPLVQ 984
L Q
Sbjct: 235 KHYLDQ 240
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 29/226 (12%)
Query: 774 IGTGSSGVVYRV---TIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGS 830
IG+G G++Y P + V K+ E+G SE++ + K+ ++ W
Sbjct: 45 IGSGGFGLIYLAFPTNKPEKDARHVVKV-EYQENGPLFSELKFYQRVAKKDCIK--KWIE 101
Query: 831 NKNLKLL----------------FYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVA-- 872
K L L Y ++ L L ++ + LG+
Sbjct: 102 RKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQLGIRML 161
Query: 873 HALAYLHHDCMPPILHGDVKAMNVLLGPGY--QAYLADFGLARIVSGSGDDNCSKTNQRP 930
L Y+H + +HGD+KA N+LLG Q YLAD+GL+ +G+ + N R
Sbjct: 162 DVLEYIHEN---EYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRK 218
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976
G+ + + + ++ +SDV G +L L G+ P + L
Sbjct: 219 GHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNL 264
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 107/260 (41%), Gaps = 53/260 (20%)
Query: 763 DVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSI 817
DV T+ + IG G+ G+V N +A+KK+ S E + EI+ L
Sbjct: 18 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRF 76
Query: 818 RHKNIV------RLLGWGSNKNL------------KLLFYDYLPNGSLSSLLHGAGKGGA 859
RH+NI+ R K++ KLL +L N + L
Sbjct: 77 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------- 128
Query: 860 DWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919
Y+++ G L Y+H +LH D+K N+LL + DFGLAR+
Sbjct: 129 -----YQILRG----LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 176
Query: 920 DDNCSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978
D T + + Y APE + + T+ D++S G +L E+L+ R P PG
Sbjct: 177 DHTGFLT----EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPG 228
Query: 979 GAPLVQWTPLMFLMLNLEAE 998
L Q ++ ++ + E E
Sbjct: 229 KHYLDQLNHILGILGSPEQE 248
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 100/246 (40%), Gaps = 53/246 (21%)
Query: 763 DVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSI 817
DV T+ + IG G+ G+V N +A+KK+ S E + EI+ L
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRF 82
Query: 818 RHKNIV------RLLGWGSNKNL------------KLLFYDYLPNGSLSSLLHGAGKGGA 859
RH+NI+ R K++ KLL +L N + L
Sbjct: 83 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFL-------- 134
Query: 860 DWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919
Y+++ G L Y+H +LH D+K N+LL + DFGLAR+
Sbjct: 135 -----YQILRG----LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182
Query: 920 DDNCSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978
D T + + Y APE + + T+ D++S G +L E+L+ R P PG
Sbjct: 183 D----HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPG 234
Query: 979 GAPLVQ 984
L Q
Sbjct: 235 KHYLDQ 240
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 101/246 (41%), Gaps = 53/246 (21%)
Query: 763 DVVRNLTSANVIGTGSSGVVYRVTI-PNGETLAVKKMWSSDESGAFSS----EIQTLGSI 817
DV T+ + IG G+ G+V N +A+KK+ S E + EI+ L
Sbjct: 22 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRF 80
Query: 818 RHKNIV------RLLGWGSNKNL------------KLLFYDYLPNGSLSSLLHGAGKGGA 859
RH+NI+ R K++ KLL +L N + L
Sbjct: 81 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------- 132
Query: 860 DWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919
Y+++ G L Y+H +LH D+K N+LL + DFGLAR+
Sbjct: 133 -----YQILRG----LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV----A 176
Query: 920 DDNCSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978
D + T + + Y APE + + T+ D++S G +L E+L+ R P PG
Sbjct: 177 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPG 232
Query: 979 GAPLVQ 984
L Q
Sbjct: 233 KHYLDQ 238
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 102/246 (41%), Gaps = 53/246 (21%)
Query: 763 DVVRNLTSANVIGTGSSGVVYRVTI-PNGETLAVKKMWSSDESGAFSS----EIQTLGSI 817
DV T+ + IG G+ G+V N +A+KK+ S E + EI+ L +
Sbjct: 22 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLAF 80
Query: 818 RHKNIV------RLLGWGSNKNL------------KLLFYDYLPNGSLSSLLHGAGKGGA 859
RH+NI+ R K++ KLL +L N + L
Sbjct: 81 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------- 132
Query: 860 DWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919
Y+++ G L Y+H +LH D+K N+LL + DFGLAR+
Sbjct: 133 -----YQILRG----LKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARV----A 176
Query: 920 DDNCSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978
D + T + + Y APE + + T+ D++S G +L E+L+ R P PG
Sbjct: 177 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPG 232
Query: 979 GAPLVQ 984
L Q
Sbjct: 233 KHYLDQ 238
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 866 EVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSK 925
E+V V+ + YL +H D+ A NVLL + A ++DFGL++ + D+N K
Sbjct: 109 ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRA--DENYYK 163
Query: 926 TNQRPQLAGSY--GYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
Q G + + APE + + + KSDV+SFGV++ E + G+ P
Sbjct: 164 A----QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 866 EVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSK 925
E+V V+ + YL +H D+ A NVLL + A ++DFGL++ + D+N K
Sbjct: 121 ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRA--DENYYK 175
Query: 926 TNQRPQLAGSY--GYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
Q G + + APE + + + KSDV+SFGV++ E + G+ P
Sbjct: 176 A----QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 866 EVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSK 925
E+V V+ + YL +H D+ A NVLL + A ++DFGL++ + D+N K
Sbjct: 131 ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRA--DENYYK 185
Query: 926 TNQRPQLAGSY--GYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
Q G + + APE + + + KSDV+SFGV++ E + G+ P
Sbjct: 186 A----QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 866 EVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSK 925
E+V V+ + YL +H D+ A NVLL + A ++DFGL++ + D+N K
Sbjct: 131 ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRA--DENYYK 185
Query: 926 TNQRPQLAGSY--GYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
Q G + + APE + + + KSDV+SFGV++ E + G+ P
Sbjct: 186 A----QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 866 EVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSK 925
E+V V+ + YL +H D+ A NVLL + A ++DFGL++ + D+N K
Sbjct: 111 ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRA--DENYYK 165
Query: 926 TNQRPQLAGSY--GYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
Q G + + APE + + + KSDV+SFGV++ E + G+ P
Sbjct: 166 A----QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 866 EVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSK 925
E+V V+ + YL +H D+ A NVLL + A ++DFGL++ + D+N K
Sbjct: 115 ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRA--DENYYK 169
Query: 926 TNQRPQLAGSY--GYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
Q G + + APE + + + KSDV+SFGV++ E + G+ P
Sbjct: 170 A----QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 866 EVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSK 925
E+V V+ + YL +H D+ A NVLL + A ++DFGL++ + D+N K
Sbjct: 129 ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRA--DENYYK 183
Query: 926 TNQRPQLAGSY--GYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
Q G + + APE + + + KSDV+SFGV++ E + G+ P
Sbjct: 184 A----QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 101/246 (41%), Gaps = 53/246 (21%)
Query: 763 DVVRNLTSANVIGTGSSGVVYRVTI-PNGETLAVKKMWSSDESGAFSS----EIQTLGSI 817
DV T+ + IG G+ G+V N +A+KK+ S E + EI+ L
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRF 78
Query: 818 RHKNIV------RLLGWGSNKNL------------KLLFYDYLPNGSLSSLLHGAGKGGA 859
RH+NI+ R K++ KLL +L N + L
Sbjct: 79 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------- 130
Query: 860 DWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919
Y+++ G L Y+H +LH D+K N+LL + DFGLAR+
Sbjct: 131 -----YQILRG----LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV----A 174
Query: 920 DDNCSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978
D + T + + Y APE + + T+ D++S G +L E+L+ R P PG
Sbjct: 175 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPG 230
Query: 979 GAPLVQ 984
L Q
Sbjct: 231 KHYLDQ 236
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 101/246 (41%), Gaps = 53/246 (21%)
Query: 763 DVVRNLTSANVIGTGSSGVVYRVTI-PNGETLAVKKMWSSDESGAFSS----EIQTLGSI 817
DV T+ + IG G+ G+V N +A+KK+ S E + EI+ L
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRF 78
Query: 818 RHKNIV------RLLGWGSNKNL------------KLLFYDYLPNGSLSSLLHGAGKGGA 859
RH+NI+ R K++ KLL +L N + L
Sbjct: 79 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------- 130
Query: 860 DWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919
Y+++ G L Y+H +LH D+K N+LL + DFGLAR+
Sbjct: 131 -----YQILRG----LKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARV----A 174
Query: 920 DDNCSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978
D + T + + Y APE + + T+ D++S G +L E+L+ R P PG
Sbjct: 175 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPG 230
Query: 979 GAPLVQ 984
L Q
Sbjct: 231 KHYLDQ 236
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 101/246 (41%), Gaps = 53/246 (21%)
Query: 763 DVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSI 817
DV T+ + IG G+ G+V N +A+KK+ S E + EI+ L
Sbjct: 25 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRF 83
Query: 818 RHKNIV------RLLGWGSNKNL------------KLLFYDYLPNGSLSSLLHGAGKGGA 859
RH+NI+ R K++ KLL +L N + L
Sbjct: 84 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------- 135
Query: 860 DWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919
Y+++ G L Y+H +LH D+K N+LL + DFGLAR+
Sbjct: 136 -----YQILRG----LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV----A 179
Query: 920 DDNCSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978
D + T + + Y APE + + T+ D++S G +L E+L+ R P PG
Sbjct: 180 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPG 235
Query: 979 GAPLVQ 984
L Q
Sbjct: 236 KHYLDQ 241
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 101/246 (41%), Gaps = 53/246 (21%)
Query: 763 DVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSI 817
DV T+ + IG G+ G+V N +A+KK+ S E + EI+ L
Sbjct: 26 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRF 84
Query: 818 RHKNIV------RLLGWGSNKNL------------KLLFYDYLPNGSLSSLLHGAGKGGA 859
RH+NI+ R K++ KLL +L N + L
Sbjct: 85 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------- 136
Query: 860 DWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919
Y+++ G L Y+H +LH D+K N+LL + DFGLAR+
Sbjct: 137 -----YQILRG----LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV----A 180
Query: 920 DDNCSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978
D + T + + Y APE + + T+ D++S G +L E+L+ R P PG
Sbjct: 181 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPG 236
Query: 979 GAPLVQ 984
L Q
Sbjct: 237 KHYLDQ 242
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 101/246 (41%), Gaps = 53/246 (21%)
Query: 763 DVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSI 817
DV T+ + IG G+ G+V N +A+KK+ S E + EI+ L
Sbjct: 17 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRF 75
Query: 818 RHKNIV------RLLGWGSNKNL------------KLLFYDYLPNGSLSSLLHGAGKGGA 859
RH+NI+ R K++ KLL +L N + L
Sbjct: 76 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------- 127
Query: 860 DWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919
Y+++ G L Y+H +LH D+K N+LL + DFGLAR+
Sbjct: 128 -----YQILRG----LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV----A 171
Query: 920 DDNCSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978
D + T + + Y APE + + T+ D++S G +L E+L+ R P PG
Sbjct: 172 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPG 227
Query: 979 GAPLVQ 984
L Q
Sbjct: 228 KHYLDQ 233
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 101/246 (41%), Gaps = 53/246 (21%)
Query: 763 DVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSI 817
DV T+ + IG G+ G+V N +A+KK+ S E + EI+ L
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRF 82
Query: 818 RHKNIV------RLLGWGSNKNL------------KLLFYDYLPNGSLSSLLHGAGKGGA 859
RH+NI+ R K++ KLL +L N + L
Sbjct: 83 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------- 134
Query: 860 DWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919
Y+++ G L Y+H +LH D+K N+LL + DFGLAR+
Sbjct: 135 -----YQILRG----LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV----A 178
Query: 920 DDNCSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978
D + T + + Y APE + + T+ D++S G +L E+L+ R P PG
Sbjct: 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPG 234
Query: 979 GAPLVQ 984
L Q
Sbjct: 235 KHYLDQ 240
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 101/246 (41%), Gaps = 53/246 (21%)
Query: 763 DVVRNLTSANVIGTGSSGVVYRVTI-PNGETLAVKKMWSSDESGAFSS----EIQTLGSI 817
DV T+ + IG G+ G+V N +A+KK+ S E + EI+ L
Sbjct: 28 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRF 86
Query: 818 RHKNIV------RLLGWGSNKNL------------KLLFYDYLPNGSLSSLLHGAGKGGA 859
RH+NI+ R K++ KLL +L N + L
Sbjct: 87 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------- 138
Query: 860 DWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919
Y+++ G L Y+H +LH D+K N+LL + DFGLAR+
Sbjct: 139 -----YQILRG----LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARV----A 182
Query: 920 DDNCSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978
D + T + + Y APE + + T+ D++S G +L E+L+ R P PG
Sbjct: 183 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPG 238
Query: 979 GAPLVQ 984
L Q
Sbjct: 239 KHYLDQ 244
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 101/246 (41%), Gaps = 53/246 (21%)
Query: 763 DVVRNLTSANVIGTGSSGVVYRVTI-PNGETLAVKKMWSSDESGAFSS----EIQTLGSI 817
DV T+ + IG G+ G+V N +A+KK+ S E + EI+ L
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRF 78
Query: 818 RHKNIV------RLLGWGSNKNL------------KLLFYDYLPNGSLSSLLHGAGKGGA 859
RH+NI+ R K++ KLL +L N + L
Sbjct: 79 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------- 130
Query: 860 DWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919
Y+++ G L Y+H +LH D+K N+LL + DFGLAR+
Sbjct: 131 -----YQILRG----LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARV----A 174
Query: 920 DDNCSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978
D + T + + Y APE + + T+ D++S G +L E+L+ R P PG
Sbjct: 175 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPG 230
Query: 979 GAPLVQ 984
L Q
Sbjct: 231 KHYLDQ 236
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 87/211 (41%), Gaps = 22/211 (10%)
Query: 772 NVIGTGSSGVVY---RVTIPN-GETLAVKKM------WSSDESGAFSSEIQTLGSIRHKN 821
V+G G G V+ +VT N G+ A+K + ++ ++ +E L ++H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 822 IVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHD 881
IV L+ L +YL G L L G D Y + ++ AL +LH
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFY--LAEISMALGHLHQK 140
Query: 882 CMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAP 941
I++ D+K N++L L DFGL + D + T G+ YMAP
Sbjct: 141 G---IIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHT-----FCGTIEYMAP 190
Query: 942 EHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
E D +S G ++ ++LTG P
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 101/246 (41%), Gaps = 53/246 (21%)
Query: 763 DVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSI 817
DV T+ + IG G+ G+V N +A+KK+ S E + EI+ L
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYXQRTLREIKILLRF 82
Query: 818 RHKNIV------RLLGWGSNKNL------------KLLFYDYLPNGSLSSLLHGAGKGGA 859
RH+NI+ R K++ KLL +L N + L
Sbjct: 83 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------- 134
Query: 860 DWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919
Y+++ G L Y+H +LH D+K N+LL + DFGLAR+
Sbjct: 135 -----YQILRG----LKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARV----A 178
Query: 920 DDNCSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978
D + T + + Y APE + + T+ D++S G +L E+L+ R P PG
Sbjct: 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPG 234
Query: 979 GAPLVQ 984
L Q
Sbjct: 235 KHYLDQ 240
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 87/209 (41%), Gaps = 26/209 (12%)
Query: 774 IGTGSSGVVYRVTIPNGETLAV------KKMWSSDESGAFSSEIQTLGSIRHKNIVRLLG 827
IG GS G V V + + + +K +E E+Q + + H +V L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNL-- 80
Query: 828 WGSNKNLKLLFY--DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPP 885
W S ++ + +F D L G L H E + + AL YL +
Sbjct: 81 WYSFQDEEDMFMVVDLLLGGDLR--YHLQQNVHFKEETVKLFICELVMALDYLQNQ---R 135
Query: 886 ILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHAS 945
I+H D+K N+LL ++ DF +A ++ + Q +AG+ YMAPE S
Sbjct: 136 IIHRDMKPDNILLDEHGHVHITDFNIAAML--------PRETQITTMAGTKPYMAPEMFS 187
Query: 946 MQR---ITEKSDVYSFGVVLLEVLTGRHP 971
++ + D +S GV E+L GR P
Sbjct: 188 SRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 101/246 (41%), Gaps = 53/246 (21%)
Query: 763 DVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSI 817
DV T+ + IG G+ G+V N +A+KK+ S E + EI+ L
Sbjct: 18 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRF 76
Query: 818 RHKNIV------RLLGWGSNKNL------------KLLFYDYLPNGSLSSLLHGAGKGGA 859
RH+NI+ R K++ KLL +L N + L
Sbjct: 77 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------- 128
Query: 860 DWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919
Y+++ G L Y+H +LH D+K N+LL + DFGLAR+
Sbjct: 129 -----YQILRG----LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARV----A 172
Query: 920 DDNCSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978
D + T + + Y APE + + T+ D++S G +L E+L+ R P PG
Sbjct: 173 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPG 228
Query: 979 GAPLVQ 984
L Q
Sbjct: 229 KHYLDQ 234
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 101/246 (41%), Gaps = 53/246 (21%)
Query: 763 DVVRNLTSANVIGTGSSGVVYRVTI-PNGETLAVKKMWSSDESGAFSS----EIQTLGSI 817
DV T+ + IG G+ G+V N +A+KK+ S E + EI+ L
Sbjct: 40 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRF 98
Query: 818 RHKNIV------RLLGWGSNKNL------------KLLFYDYLPNGSLSSLLHGAGKGGA 859
RH+NI+ R K++ KLL +L N + L
Sbjct: 99 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------- 150
Query: 860 DWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919
Y+++ G L Y+H +LH D+K N+LL + DFGLAR+
Sbjct: 151 -----YQILRG----LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV----A 194
Query: 920 DDNCSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978
D + T + + Y APE + + T+ D++S G +L E+L+ R P PG
Sbjct: 195 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPG 250
Query: 979 GAPLVQ 984
L Q
Sbjct: 251 KHYLDQ 256
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 54/217 (24%), Positives = 90/217 (41%), Gaps = 27/217 (12%)
Query: 773 VIGTGSSGVVYRV-TIPNGETLAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVRLLG-WG 829
V+G G+ G V + + A+KK+ ++E SE+ L S+ H+ +VR W
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWL 72
Query: 830 SNKNL----------KLLF--YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAY 877
+N LF +Y N +L L+H + + + + AL+Y
Sbjct: 73 ERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLN-QQRDEYWRLFRQILEALSY 131
Query: 878 LHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGD----DNCSKTNQRPQLA 933
+H I+H ++K N+ + + DFGLA+ V S D D+ + L
Sbjct: 132 IHSQ---GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLT 188
Query: 934 GSYG---YMAPE-HASMQRITEKSDVYSFGVVLLEVL 966
+ G Y+A E EK D YS G++ E +
Sbjct: 189 SAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 17/167 (10%)
Query: 810 EIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVL 869
E+ L I+H N++ L NK +L + + G L L A K E E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK 121
Query: 870 GVAHALAYLHHDCMPPILHGDVKAMNVLL----GPGYQAYLADFGLARIVSGSGDDNCSK 925
+ + + YLH I H D+K N++L P + + DFGLA +
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG------- 171
Query: 926 TNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
N+ + G+ ++APE + + + ++D++S GV+ +L+G P
Sbjct: 172 -NEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 101/246 (41%), Gaps = 53/246 (21%)
Query: 763 DVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSI 817
DV T+ + IG G+ G+V N +A+KK+ S E + EI+ L
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRF 82
Query: 818 RHKNIV------RLLGWGSNKNL------------KLLFYDYLPNGSLSSLLHGAGKGGA 859
RH+NI+ R K++ KLL +L N + L
Sbjct: 83 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------- 134
Query: 860 DWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919
Y+++ G L Y+H +LH D+K N+LL + DFGLAR+
Sbjct: 135 -----YQILRG----LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV----A 178
Query: 920 DDNCSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978
D + T + + Y APE + + T+ D++S G +L E+L+ R P PG
Sbjct: 179 DPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPG 234
Query: 979 GAPLVQ 984
L Q
Sbjct: 235 KHYLDQ 240
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 101/246 (41%), Gaps = 53/246 (21%)
Query: 763 DVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSI 817
DV T+ + IG G+ G+V N +A+KK+ S E + EI+ L
Sbjct: 25 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRF 83
Query: 818 RHKNIV------RLLGWGSNKNL------------KLLFYDYLPNGSLSSLLHGAGKGGA 859
RH+NI+ R K++ KLL +L N + L
Sbjct: 84 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------- 135
Query: 860 DWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919
Y+++ G L Y+H +LH D+K N+LL + DFGLAR+
Sbjct: 136 -----YQILRG----LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV----A 179
Query: 920 DDNCSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978
D + T + + Y APE + + T+ D++S G +L E+L+ R P PG
Sbjct: 180 DPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPG 235
Query: 979 GAPLVQ 984
L Q
Sbjct: 236 KHYLDQ 241
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 32/226 (14%)
Query: 756 KLDFSIDDVVRNLTSANVIGTGSSGVV-YRVTIPNGETLAVKKMWSSDESGAFSS----E 810
K + + V R+L +G+G+ G V V G +A+KK++ +S F+ E
Sbjct: 18 KTAWEVRAVYRDLQP---VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRE 74
Query: 811 IQTLGSIRHKNIVRLLG-WGSNKNLKLL--FYDYLP--NGSLSSLLHGAGKGGADWEARY 865
++ L +RH+N++ LL + ++ L FY +P L L+ G E R
Sbjct: 75 LRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLG----EDRI 130
Query: 866 E-VVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
+ +V + L Y+H I+H D+K N+ + + + DFGLAR
Sbjct: 131 QFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR----------Q 177
Query: 925 KTNQRPQLAGSYGYMAPEHA-SMQRITEKSDVYSFGVVLLEVLTGR 969
++ + Y APE + R T+ D++S G ++ E++TG+
Sbjct: 178 ADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 101/246 (41%), Gaps = 53/246 (21%)
Query: 763 DVVRNLTSANVIGTGSSGVVYRVTI-PNGETLAVKKMWSSDESGAFSS----EIQTLGSI 817
DV T+ + IG G+ G+V N +A+KK+ S E + EI+ L
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRF 78
Query: 818 RHKNIV------RLLGWGSNKNL------------KLLFYDYLPNGSLSSLLHGAGKGGA 859
RH+NI+ R K++ KLL +L N + L
Sbjct: 79 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------- 130
Query: 860 DWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919
Y+++ G L Y+H +LH D+K N+LL + DFGLAR+
Sbjct: 131 -----YQILRG----LKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARV----A 174
Query: 920 DDNCSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978
D + T + + Y APE + + T+ D++S G +L E+L+ R P PG
Sbjct: 175 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPG 230
Query: 979 GAPLVQ 984
L Q
Sbjct: 231 KHYLDQ 236
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 25/217 (11%)
Query: 768 LTSANVIGTGSSGVVYR-----VTIPNGET-LAVKKM---WSSDESGAFSSEIQTLGSIR 818
+T + +G GS G+VY V ET +A+K + S E F +E +
Sbjct: 18 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN 77
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGK--------GGADWEARYEVVLG 870
++VRLLG S L+ + + G L S L ++
Sbjct: 78 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 137
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+A +AYL+ + +H D+ A N ++ + + DFG+ R + + P
Sbjct: 138 IADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 194
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+M+PE T SDV+SFGVVL E+ T
Sbjct: 195 -----VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 25/217 (11%)
Query: 768 LTSANVIGTGSSGVVYR-----VTIPNGET-LAVKKM---WSSDESGAFSSEIQTLGSIR 818
+T + +G GS G+VY V ET +A+K + S E F +E +
Sbjct: 20 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN 79
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGK--------GGADWEARYEVVLG 870
++VRLLG S L+ + + G L S L ++
Sbjct: 80 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 139
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+A +AYL+ + +H D+ A N ++ + + DFG+ R + + P
Sbjct: 140 IADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 196
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+M+PE T SDV+SFGVVL E+ T
Sbjct: 197 -----VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 25/217 (11%)
Query: 768 LTSANVIGTGSSGVVYR-----VTIPNGET-LAVKKM---WSSDESGAFSSEIQTLGSIR 818
+T + +G GS G+VY V ET +A+K + S E F +E +
Sbjct: 21 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN 80
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGK--------GGADWEARYEVVLG 870
++VRLLG S L+ + + G L S L ++
Sbjct: 81 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 140
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+A +AYL+ + +H D+ A N ++ + + DFG+ R + + P
Sbjct: 141 IADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 197
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+M+PE T SDV+SFGVVL E+ T
Sbjct: 198 -----VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 14/165 (8%)
Query: 810 EIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVL 869
E Q + + + IVRL+G + L +L + G L L G + E++
Sbjct: 60 EAQIMHQLDNPYIVRLIGVCQAEAL-MLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLH 117
Query: 870 GVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQR 929
V+ + YL +H D+ A NVLL + A ++DFGL++ + G D+ T +
Sbjct: 118 QVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKAL---GADDSYYTARS 171
Query: 930 PQLAGSY--GYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
AG + + APE + ++ + +SDV+S+GV + E L+ G+ P
Sbjct: 172 ---AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 101/233 (43%), Gaps = 37/233 (15%)
Query: 768 LTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLG-SIRHKNIVRLL 826
+ S ++G GSSG V G +AVK+M D EI+ L S H N++R
Sbjct: 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRML-IDFCDIALMEIKLLTESDDHPNVIRY- 74
Query: 827 GWGSNKNLKLLFYDY-LPNGSLSSLLHGAGKGGADWEARYE-----VVLGVAHALAYLHH 880
+ S + L+ L N +L L+ + + + E ++ +A +A+LH
Sbjct: 75 -YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 133
Query: 881 DCMPPILHGDVKAMNVLL-------------GPGYQAYLADFGLARIVSGSGDDNCSKTN 927
I+H D+K N+L+ + ++DFGL + + SG +
Sbjct: 134 ---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD-SGQSSFRTNL 189
Query: 928 QRPQLAGSYGYMAPE-------HASMQRITEKSDVYSFGVVLLEVLT-GRHPL 972
P +G+ G+ APE + +R+T D++S G V +L+ G+HP
Sbjct: 190 NNP--SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 25/217 (11%)
Query: 768 LTSANVIGTGSSGVVYR-----VTIPNGET-LAVKKM---WSSDESGAFSSEIQTLGSIR 818
+T + +G GS G+VY V ET +A+K + S E F +E +
Sbjct: 20 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN 79
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGK--------GGADWEARYEVVLG 870
++VRLLG S L+ + + G L S L ++
Sbjct: 80 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 139
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+A +AYL+ + +H D+ A N ++ + + DFG+ R + + P
Sbjct: 140 IADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 196
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+M+PE T SDV+SFGVVL E+ T
Sbjct: 197 -----VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 81/212 (38%), Gaps = 27/212 (12%)
Query: 772 NVIGTGSSG-----------VVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHK 820
VIG GS G V Y V + + + KK +E S L +++H
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKK----EEKHIMSERNVLLKNVKHP 99
Query: 821 NIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHH 880
+V L + DY+ G L L + + AR+ +A AL YLH
Sbjct: 100 FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRE-RCFLEPRARFYAA-EIASALGYLHS 157
Query: 881 DCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMA 940
I++ D+K N+LL L DFGL + +N + G+ Y+A
Sbjct: 158 LN---IVYRDLKPENILLDSQGHIVLTDFGLCK-------ENIEHNSTTSTFCGTPEYLA 207
Query: 941 PEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
PE Q D + G VL E+L G P
Sbjct: 208 PEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 25/217 (11%)
Query: 768 LTSANVIGTGSSGVVYR-----VTIPNGET-LAVKKM---WSSDESGAFSSEIQTLGSIR 818
+T + +G GS G+VY V ET +A+K + S E F +E +
Sbjct: 14 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN 73
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGK--------GGADWEARYEVVLG 870
++VRLLG S L+ + + G L S L ++
Sbjct: 74 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 133
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+A +AYL+ + +H D+ A N ++ + + DFG+ R + + P
Sbjct: 134 IADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 190
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+M+PE T SDV+SFGVVL E+ T
Sbjct: 191 -----VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 25/217 (11%)
Query: 768 LTSANVIGTGSSGVVYR-----VTIPNGET-LAVKKM---WSSDESGAFSSEIQTLGSIR 818
+T + +G GS G+VY V ET +A+K + S E F +E +
Sbjct: 27 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN 86
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGK--------GGADWEARYEVVLG 870
++VRLLG S L+ + + G L S L ++
Sbjct: 87 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 146
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+A +AYL+ + +H D+ A N ++ + + DFG+ R + + P
Sbjct: 147 IADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 203
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+M+PE T SDV+SFGVVL E+ T
Sbjct: 204 -----VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 90/188 (47%), Gaps = 13/188 (6%)
Query: 144 TEVCRLRKLESLYLNTNLLEGEIPSDIGNLSSLAYLTLYDNQLSGKIPKSIGALSKLQVF 203
T + L L SL LN N +E P + +L+SL Y T Y NQ++ P + ++L
Sbjct: 171 TPIANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANXTRLNSL 226
Query: 204 RAGGNQNLKGELPWEIGNCSNLVMLGLAETSISGNVPSSIGMLERIQTIAIYTSLLSGPI 263
+ G N+ + P + N S L L + IS +++ L +++ + + ++ +S
Sbjct: 227 KIGNNK-ITDLSP--LANLSQLTWLEIGTNQISD--INAVKDLTKLKXLNVGSNQISD-- 279
Query: 264 PEEIGNCSELQNLYLYQNSISGPIPGRIGALSKLKSLLLWQNSLVGAIPDELGSCTELTV 323
+ N S+L +L+L N + IG L+ L +L L QN + P L S ++
Sbjct: 280 ISVLNNLSQLNSLFLNNNQLGNEDXEVIGGLTNLTTLFLSQNHITDIRP--LASLSKXDS 337
Query: 324 VDFSDNLL 331
DF++ ++
Sbjct: 338 ADFANQVI 345
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 101/246 (41%), Gaps = 53/246 (21%)
Query: 763 DVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSS----EIQTLGSI 817
DV T+ + IG G+ G+V N +A++K+ S E + EI+ L
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKI-SPFEHQTYCQRTLREIKILLRF 82
Query: 818 RHKNIV------RLLGWGSNKNL------------KLLFYDYLPNGSLSSLLHGAGKGGA 859
RH+NI+ R K++ KLL +L N + L
Sbjct: 83 RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------- 134
Query: 860 DWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919
Y+++ G L Y+H +LH D+K N+LL + DFGLAR+
Sbjct: 135 -----YQILRG----LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV----A 178
Query: 920 DDNCSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978
D + T + + Y APE + + T+ D++S G +L E+L+ R P PG
Sbjct: 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPG 234
Query: 979 GAPLVQ 984
L Q
Sbjct: 235 KHYLDQ 240
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 17/167 (10%)
Query: 810 EIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVL 869
E+ L I+H N++ L NK +L + + G L L A K E E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK 121
Query: 870 GVAHALAYLHHDCMPPILHGDVKAMNVLL----GPGYQAYLADFGLARIVSGSGDDNCSK 925
+ + + YLH I H D+K N++L P + + DFGLA +
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG------- 171
Query: 926 TNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
N+ + G+ ++APE + + + ++D++S GV+ +L+G P
Sbjct: 172 -NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 17/167 (10%)
Query: 810 EIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVL 869
E+ L I+H N++ L NK +L + + G L L A K E E +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK 120
Query: 870 GVAHALAYLHHDCMPPILHGDVKAMNVLL----GPGYQAYLADFGLARIVSGSGDDNCSK 925
+ + + YLH I H D+K N++L P + + DFGLA +
Sbjct: 121 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG------- 170
Query: 926 TNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
N+ + G+ ++APE + + + ++D++S GV+ +L+G P
Sbjct: 171 -NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 17/167 (10%)
Query: 810 EIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVL 869
E+ L I+H N++ L NK +L + + G L L A K E E +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK 120
Query: 870 GVAHALAYLHHDCMPPILHGDVKAMNVLL----GPGYQAYLADFGLARIVSGSGDDNCSK 925
+ + + YLH I H D+K N++L P + + DFGLA +
Sbjct: 121 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG------- 170
Query: 926 TNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
N+ + G+ ++APE + + + ++D++S GV+ +L+G P
Sbjct: 171 -NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 17/167 (10%)
Query: 810 EIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVL 869
E+ L I+H N++ L NK +L + + G L L A K E E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK 121
Query: 870 GVAHALAYLHHDCMPPILHGDVKAMNVLL----GPGYQAYLADFGLARIVSGSGDDNCSK 925
+ + + YLH I H D+K N++L P + + DFGLA +
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG------- 171
Query: 926 TNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
N+ + G+ ++APE + + + ++D++S GV+ +L+G P
Sbjct: 172 -NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 17/167 (10%)
Query: 810 EIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVL 869
E+ L I+H N++ L NK +L + + G L L A K E E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK 121
Query: 870 GVAHALAYLHHDCMPPILHGDVKAMNVLL----GPGYQAYLADFGLARIVSGSGDDNCSK 925
+ + + YLH I H D+K N++L P + + DFGLA +
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG------- 171
Query: 926 TNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
N+ + G+ ++APE + + + ++D++S GV+ +L+G P
Sbjct: 172 -NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 17/167 (10%)
Query: 810 EIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVL 869
E+ L I+H N++ L NK +L + + G L L A K E E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK 121
Query: 870 GVAHALAYLHHDCMPPILHGDVKAMNVLL----GPGYQAYLADFGLARIVSGSGDDNCSK 925
+ + + YLH I H D+K N++L P + + DFGLA +
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG------- 171
Query: 926 TNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
N+ + G+ ++APE + + + ++D++S GV+ +L+G P
Sbjct: 172 -NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 17/167 (10%)
Query: 810 EIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVL 869
E+ L I+H N++ L NK +L + + G L L A K E E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK 121
Query: 870 GVAHALAYLHHDCMPPILHGDVKAMNVLL----GPGYQAYLADFGLARIVSGSGDDNCSK 925
+ + + YLH I H D+K N++L P + + DFGLA +
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG------- 171
Query: 926 TNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
N+ + G+ ++APE + + + ++D++S GV+ +L+G P
Sbjct: 172 -NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 17/167 (10%)
Query: 810 EIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVL 869
E+ L I+H N++ L NK +L + + G L L A K E E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK 121
Query: 870 GVAHALAYLHHDCMPPILHGDVKAMNVLL----GPGYQAYLADFGLARIVSGSGDDNCSK 925
+ + + YLH I H D+K N++L P + + DFGLA +
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG------- 171
Query: 926 TNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
N+ + G+ ++APE + + + ++D++S GV+ +L+G P
Sbjct: 172 -NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 17/167 (10%)
Query: 810 EIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVL 869
E+ L I+H N++ L NK +L + + G L L A K E E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK 121
Query: 870 GVAHALAYLHHDCMPPILHGDVKAMNVLL----GPGYQAYLADFGLARIVSGSGDDNCSK 925
+ + + YLH I H D+K N++L P + + DFGLA +
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG------- 171
Query: 926 TNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
N+ + G+ ++APE + + + ++D++S GV+ +L+G P
Sbjct: 172 -NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 17/167 (10%)
Query: 810 EIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVL 869
E+ L I+H N++ L NK +L + + G L L A K E E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK 121
Query: 870 GVAHALAYLHHDCMPPILHGDVKAMNVLL----GPGYQAYLADFGLARIVSGSGDDNCSK 925
+ + + YLH I H D+K N++L P + + DFGLA +
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG------- 171
Query: 926 TNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
N+ + G+ ++APE + + + ++D++S GV+ +L+G P
Sbjct: 172 -NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 17/167 (10%)
Query: 810 EIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVL 869
E+ L I+H N++ L NK +L + + G L L A K E E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK 121
Query: 870 GVAHALAYLHHDCMPPILHGDVKAMNVLL----GPGYQAYLADFGLARIVSGSGDDNCSK 925
+ + + YLH I H D+K N++L P + + DFGLA +
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG------- 171
Query: 926 TNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
N+ + G+ ++APE + + + ++D++S GV+ +L+G P
Sbjct: 172 -NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 86/211 (40%), Gaps = 22/211 (10%)
Query: 772 NVIGTGSSGVVY---RVTIPN-GETLAVKKM------WSSDESGAFSSEIQTLGSIRHKN 821
V+G G G V+ +VT N G+ A+K + ++ ++ +E L ++H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 822 IVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHD 881
IV L+ L +YL G L L G D Y + ++ AL +LH
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFY--LAEISMALGHLHQK 140
Query: 882 CMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAP 941
I++ D+K N++L L DFGL + ++ G+ YMAP
Sbjct: 141 G---IIYRDLKPENIMLNHQGHVKLTDFGLCK-------ESIHDGTVTHXFCGTIEYMAP 190
Query: 942 EHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
E D +S G ++ ++LTG P
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 17/167 (10%)
Query: 810 EIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVL 869
E+ L I+H N++ L NK +L + + G L L A K E E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK 121
Query: 870 GVAHALAYLHHDCMPPILHGDVKAMNVLL----GPGYQAYLADFGLARIVSGSGDDNCSK 925
+ + + YLH I H D+K N++L P + + DFGLA +
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG------- 171
Query: 926 TNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
N+ + G+ ++APE + + + ++D++S GV+ +L+G P
Sbjct: 172 -NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 100/233 (42%), Gaps = 37/233 (15%)
Query: 768 LTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLG-SIRHKNIVRLL 826
+ S ++G GSSG V G +AVK+M D EI+ L S H N++R
Sbjct: 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRML-IDFCDIALMEIKLLTESDDHPNVIRY- 74
Query: 827 GWGSNKNLKLLFYDY-LPNGSLSSLLHGAGKGGADWEARYE-----VVLGVAHALAYLHH 880
+ S + L+ L N +L L+ + + + E ++ +A +A+LH
Sbjct: 75 -YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 133
Query: 881 DCMPPILHGDVKAMNVLL-------------GPGYQAYLADFGLARIVSGSGDDNCSKTN 927
I+H D+K N+L+ + ++DFGL + + SG
Sbjct: 134 ---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD-SGQXXFRXNL 189
Query: 928 QRPQLAGSYGYMAPE-------HASMQRITEKSDVYSFGVVLLEVLT-GRHPL 972
P +G+ G+ APE + +R+T D++S G V +L+ G+HP
Sbjct: 190 NNP--SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 7 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 66
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 127 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 178
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 179 MAG------FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 80/215 (37%), Gaps = 28/215 (13%)
Query: 771 ANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDE------SGAFSSEIQTLGSIRHKNIVR 824
VIG G+ G V V + + K+ S E S F E + +V+
Sbjct: 74 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQ 133
Query: 825 LLGWGSNKNLKLLFYDYLPNGSLSSLLHGAG---KGGADWEARYEVVLGVAHALAYLHHD 881
L + + +Y+P G L +L+ K + A + L H++ ++H D
Sbjct: 134 LFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRD 193
Query: 882 CMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAP 941
VK N+LL LADFG ++ G C G+ Y++P
Sbjct: 194 ---------VKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA------VGTPDYISP 238
Query: 942 EHASMQ----RITEKSDVYSFGVVLLEVLTGRHPL 972
E Q + D +S GV L E+L G P
Sbjct: 239 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 7 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 66
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 127 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 178
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 179 MAG------FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 24/179 (13%)
Query: 810 EIQTLGSIRHKNIVRLLGW--GSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEV 867
E + L + HKNIV+L + K+L ++ P GSL ++L E+ + +
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI 116
Query: 868 VLGVAHALAYLHHDCMPPILHGDVK---AMNVLLGPGYQAY-LADFGLARIVSGSGDDNC 923
VL + ++H I+H ++K M V+ G Y L DFG AR + DD
Sbjct: 117 VL--RDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE---DD-- 169
Query: 924 SKTNQRPQLAGSYGYMAP---EHASMQRITEKS-----DVYSFGVVLLEVLTGRHPLDP 974
Q L G+ Y+ P E A +++ +K D++S GV TG P P
Sbjct: 170 ---EQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRP 225
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 24/179 (13%)
Query: 810 EIQTLGSIRHKNIVRLLGW--GSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEV 867
E + L + HKNIV+L + K+L ++ P GSL ++L E+ + +
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI 116
Query: 868 VLGVAHALAYLHHDCMPPILHGDVK---AMNVLLGPGYQAY-LADFGLARIVSGSGDDNC 923
VL + ++H I+H ++K M V+ G Y L DFG AR + DD
Sbjct: 117 VL--RDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE---DD-- 169
Query: 924 SKTNQRPQLAGSYGYMAP---EHASMQRITEKS-----DVYSFGVVLLEVLTGRHPLDP 974
Q L G+ Y+ P E A +++ +K D++S GV TG P P
Sbjct: 170 ---EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRP 225
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 81/215 (37%), Gaps = 28/215 (13%)
Query: 771 ANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDE------SGAFSSEIQTLGSIRHKNIVR 824
VIG G+ G V V + + K+ S E S F E + +V+
Sbjct: 80 VKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQ 139
Query: 825 LLGWGSNKNLKLLFYDYLPNGSLSSLLHGAG---KGGADWEARYEVVLGVAHALAYLHHD 881
L + + +Y+P G L +L+ K + A + L H++
Sbjct: 140 LFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMG----- 194
Query: 882 CMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAP 941
++H DVK N+LL LADFG + +G +C G+ Y++P
Sbjct: 195 ----LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTA------VGTPDYISP 244
Query: 942 EHASMQ----RITEKSDVYSFGVVLLEVLTGRHPL 972
E Q + D +S GV L E+L G P
Sbjct: 245 EVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 17/167 (10%)
Query: 810 EIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVL 869
E+ L I+H N++ L NK +L + + G L L A K E E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL--AEKESLTEEEATEFLK 121
Query: 870 GVAHALAYLHHDCMPPILHGDVKAMNVLL----GPGYQAYLADFGLARIVSGSGDDNCSK 925
+ + + YLH I H D+K N++L P + + DFGLA +
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG------- 171
Query: 926 TNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
N+ + G+ ++APE + + + ++D++S GV+ +L+G P
Sbjct: 172 -NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 80/215 (37%), Gaps = 28/215 (13%)
Query: 771 ANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDE------SGAFSSEIQTLGSIRHKNIVR 824
VIG G+ G V V + + K+ S E S F E + +V+
Sbjct: 79 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQ 138
Query: 825 LLGWGSNKNLKLLFYDYLPNGSLSSLLHGAG---KGGADWEARYEVVLGVAHALAYLHHD 881
L + + +Y+P G L +L+ K + A + L H++ ++H D
Sbjct: 139 LFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRD 198
Query: 882 CMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAP 941
VK N+LL LADFG ++ G C G+ Y++P
Sbjct: 199 ---------VKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA------VGTPDYISP 243
Query: 942 EHASMQ----RITEKSDVYSFGVVLLEVLTGRHPL 972
E Q + D +S GV L E+L G P
Sbjct: 244 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 80/215 (37%), Gaps = 28/215 (13%)
Query: 771 ANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDE------SGAFSSEIQTLGSIRHKNIVR 824
VIG G+ G V V + + K+ S E S F E + +V+
Sbjct: 79 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQ 138
Query: 825 LLGWGSNKNLKLLFYDYLPNGSLSSLLHGAG---KGGADWEARYEVVLGVAHALAYLHHD 881
L + + +Y+P G L +L+ K + A + L H++ ++H D
Sbjct: 139 LFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRD 198
Query: 882 CMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAP 941
VK N+LL LADFG ++ G C G+ Y++P
Sbjct: 199 ---------VKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA------VGTPDYISP 243
Query: 942 EHASMQ----RITEKSDVYSFGVVLLEVLTGRHPL 972
E Q + D +S GV L E+L G P
Sbjct: 244 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 47.4 bits (111), Expect = 5e-05, Method: Composition-based stats.
Identities = 55/217 (25%), Positives = 87/217 (40%), Gaps = 25/217 (11%)
Query: 768 LTSANVIGTGSSGVVYR-----VTIPNGET-LAVKKM---WSSDESGAFSSEIQTLGSIR 818
+T + +G GS G+VY V ET +A+K + S E F +E +
Sbjct: 14 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN 73
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGK--------GGADWEARYEVVLG 870
++VRLLG S L+ + + G L S L ++
Sbjct: 74 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 133
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+A +AYL+ + +H D+ A N + + + DFG+ R + + P
Sbjct: 134 IADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 190
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967
+M+PE T SDV+SFGVVL E+ T
Sbjct: 191 -----VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 108/246 (43%), Gaps = 34/246 (13%)
Query: 739 ANNSFTADDTWEMTLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVK 796
A FT T Y Q+L+ +I +V + + +G+G+ G V + +G +AVK
Sbjct: 23 AAAPFTMSHKERPTFYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVK 82
Query: 797 KMWSSDESGAFSS----EIQTLGSIRHKNIVRLLGWGSNKNLKLLFYD-YLPNGSLSSLL 851
K+ +S + E++ L ++H+N++ LL + F D YL + + L
Sbjct: 83 KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADL 142
Query: 852 HGAGKGG--ADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADF 909
+ K D ++ ++ + L Y+H I+H D+K N+ + + + DF
Sbjct: 143 NNIVKCQKLTDDHVQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 198
Query: 910 GLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPE------HASMQRITEKSDVYSFGVVLL 963
GLAR DD + + Y APE H +M D++S G ++
Sbjct: 199 GLAR----HTDDEMTG------YVATRWYRAPEIMLNWMHYNM-----TVDIWSVGCIMA 243
Query: 964 EVLTGR 969
E+LTGR
Sbjct: 244 ELLTGR 249
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 3 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 62
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 63 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 122
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 123 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 174
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 175 MAG------FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 27/213 (12%)
Query: 774 IGTGSSGVVYRV-TIPNG-ETLAVKKMW-SSDESGAFSSEIQTLGSIRH------KNIVR 824
IG G+ G V++ + NG +A+K++ + E G S I+ + +RH N+VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 825 LLG----WGSNKNLKL-LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
L +++ KL L ++++ + L++ L + G E +++ + L +LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
++H D+K N+L+ Q LADFGLARI S + + Y
Sbjct: 138 SH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ--------MALTSVVVTLWYR 186
Query: 940 APEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
APE D++S G + E+ R PL
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 27/213 (12%)
Query: 774 IGTGSSGVVYRV-TIPNG-ETLAVKKMW-SSDESGAFSSEIQTLGSIRH------KNIVR 824
IG G+ G V++ + NG +A+K++ + E G S I+ + +RH N+VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 825 LLG----WGSNKNLKL-LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
L +++ KL L ++++ + L++ L + G E +++ + L +LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
++H D+K N+L+ Q LADFGLARI S + + Y
Sbjct: 138 SH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ--------MALTSVVVTLWYR 186
Query: 940 APEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
APE D++S G + E+ R PL
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 27/213 (12%)
Query: 774 IGTGSSGVVYRV-TIPNG-ETLAVKKMW-SSDESGAFSSEIQTLGSIRH------KNIVR 824
IG G+ G V++ + NG +A+K++ + E G S I+ + +RH N+VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 825 LLG----WGSNKNLKL-LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
L +++ KL L ++++ + L++ L + G E +++ + L +LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYM 939
++H D+K N+L+ Q LADFGLARI S + + Y
Sbjct: 138 SH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ--------MALTSVVVTLWYR 186
Query: 940 APEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
APE D++S G + E+ R PL
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 106/237 (44%), Gaps = 35/237 (14%)
Query: 751 MTLYQKLDFSIDDV-------VRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSD 802
M+L +K F DV + S +G+G+ G V + +GE +A+KK+
Sbjct: 20 MSLIRKKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF 79
Query: 803 ESGAFSS----EIQTLGSIRHKNIVRLLGWGSNKNLKLLFYD-YLPNGSLSSLLHG-AGK 856
+S F+ E+ L ++H+N++ LL + + FYD YL + + L G
Sbjct: 80 QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGM 139
Query: 857 GGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVS 916
++ + +Y +V + L Y+H ++H D+K N+ + + + DFGLAR
Sbjct: 140 EFSEEKIQY-LVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHAD 195
Query: 917 GSGDDNCSKTNQRPQLAG---SYGYMAPEHA-SMQRITEKSDVYSFGVVLLEVLTGR 969
++ G + Y APE S + D++S G ++ E+LTG+
Sbjct: 196 A-------------EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 7 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 66
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 127 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 178
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 179 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 27 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 86
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 87 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 146
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 147 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 198
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 199 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 26 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 85
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 86 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 145
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 146 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 197
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 198 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + IG+G+ G V G +AVKK+ +S +
Sbjct: 12 TFYRQELNKTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 71
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 72 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 131
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 132 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDE 183
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 184 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 3 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 62
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 63 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 122
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 123 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 174
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 175 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 56/228 (24%), Positives = 83/228 (36%), Gaps = 51/228 (22%)
Query: 774 IGTGSSGVVY--------------RVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRH 819
+G G GVV+ R+ +PN E K M E++ L + H
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVM----------REVKALAKLEH 62
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG-ADW-------EAR-----YE 866
IVR KN P L + K DW E R
Sbjct: 63 PGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLH 122
Query: 867 VVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKT 926
+ L +A A+ +LH + +H D+K N+ + DFGL V+ D +T
Sbjct: 123 IFLQIAEAVEFLHSKGL---MHRDLKPSNIFFTMDDVVKVGDFGL---VTAMDQDEEEQT 176
Query: 927 NQRPQLA--------GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVL 966
P A G+ YM+PE + K D++S G++L E+L
Sbjct: 177 VLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 27/213 (12%)
Query: 772 NVIGTGSSG-VVYRVTIPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
V+G GS G V+ G+ AVK ++ + + E+Q L + H NI++L
Sbjct: 32 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 91
Query: 826 LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPP 885
+ +K L + G L + + AR ++ V + Y+H +
Sbjct: 92 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYMHKN---K 146
Query: 886 ILHGDVKAMNVLL---GPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPE 942
I+H D+K N+LL + DFGL+ S + ++ +Y Y+APE
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-------KKMKDKIGTAY-YIAPE 198
Query: 943 --HASMQRITEKSDVYSFGVVLLEVLTGRHPLD 973
H + EK DV+S GV+L +L+G P +
Sbjct: 199 VLHGTYD---EKCDVWSTGVILYILLSGCPPFN 228
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 101/238 (42%), Gaps = 33/238 (13%)
Query: 764 VVRNLTSANVIGTGSSGVV---YRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGS 816
V++ + IG+G+ G+V Y + +A+KK+ ++ + E+ +
Sbjct: 60 VLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKC 117
Query: 817 IRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR----YEVVLGV 871
+ HKNI+ LL + K L+ YL + + L + D E Y+++ G+
Sbjct: 118 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 177
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQ 931
H LH I+H D+K N+++ + DFGLAR S P
Sbjct: 178 KH----LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-------FMMTPY 223
Query: 932 LAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLM 989
+ Y Y APE E D++S G ++ E++ RH + PG + QW ++
Sbjct: 224 VVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMV--RHKI--LFPGRDYIDQWNKVI 276
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 13 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 72
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 73 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 132
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 133 VQF-LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 184
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 185 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 27 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 86
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 87 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 146
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 147 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 198
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ Y APE + + D++S G ++ E+LTGR
Sbjct: 199 MXGX------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + +G+G+ G V G +AVKK+ +S +
Sbjct: 17 TFYRQELNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 76
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 77 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 136
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 137 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 188
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 189 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 3 TFYRQELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 62
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 63 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDH 122
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 123 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 174
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 175 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 7 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 127 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 178
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 179 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 104/219 (47%), Gaps = 29/219 (13%)
Query: 772 NVIGTGSSGVVYR-VTIPNGETLAVK---KMWSSDESGAFSSEIQTLGSIR-HKNIVRLL 826
+V+G G+ V + + + AVK K S F E++ L + H+N++ L+
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFR-EVEMLYQCQGHRNVLELI 77
Query: 827 GWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPI 886
+ ++ L ++ + GS+ S +H + + EA VV VA AL +LH+ I
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIHKR-RHFNELEASV-VVQDVASALDFLHNK---GI 132
Query: 887 LHGDVKAMNVLLGPGYQA---YLADFGLARIVSGSGDDNCSKTNQRPQL---AGSYGYMA 940
H D+K N+L Q + DFGL + +GD CS + P+L GS YMA
Sbjct: 133 AHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGD--CSPIST-PELLTPCGSAEYMA 189
Query: 941 P-------EHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
P E AS+ ++ D++S GV+L +L+G P
Sbjct: 190 PEVVEAFSEEASI--YDKRCDLWSLGVILYILLSGYPPF 226
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 7 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 127 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 178
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 179 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 7 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDH 126
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 127 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDE 178
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 179 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 7 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 127 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 178
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 179 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 12 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 71
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 72 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 131
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 132 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDE 183
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 184 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 7 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 127 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 178
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 179 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 23/216 (10%)
Query: 767 NLTSANV-IGTGSSGVV----YRVTIPNGETLAVKKMWSSDESG---AFSSEIQTLGSIR 818
NL A++ +G G+ G V YR+ + +A+K + E E Q + +
Sbjct: 336 NLLIADIELGCGNFGSVRQGVYRMRKKQID-VAIKVLKQGTEKADTEEMMREAQIMHQLD 394
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYL 878
+ IVRL+G + L +L + G L L G + E++ V+ + YL
Sbjct: 395 NPYIVRLIGVCQAEAL-MLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYL 452
Query: 879 HHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSY-- 936
+H ++ A NVLL + A ++DFGL++ + G D+ T + AG +
Sbjct: 453 EEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKAL---GADDSYYTARS---AGKWPL 503
Query: 937 GYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHP 971
+ APE + ++ + +SDV+S+GV + E L+ G+ P
Sbjct: 504 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 18 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 77
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 78 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 137
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 138 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDE 189
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 190 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 9 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 68
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 69 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 128
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 129 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 180
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 181 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 101/238 (42%), Gaps = 33/238 (13%)
Query: 764 VVRNLTSANVIGTGSSGVV---YRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGS 816
V++ + IG+G+ G+V Y + +A+KK+ ++ + E+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKC 79
Query: 817 IRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR----YEVVLGV 871
+ HKNI+ LL + K L+ YL + + L + D E Y+++ G+
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGI 139
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQ 931
H LH I+H D+K N+++ + DFGLAR S P
Sbjct: 140 KH----LHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS-------FMMTPY 185
Query: 932 LAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLM 989
+ Y Y APE E D++S G ++ E++ RH + PG + QW ++
Sbjct: 186 VVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMV--RHKI--LFPGRDYIDQWNKVI 238
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 19 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAK 78
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 79 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 138
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 139 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 190
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 191 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 7 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 127 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 178
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 179 MTGX------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 887 LHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM 946
+H D+ A N+LL + DFGLAR + D K + R L +MAPE
Sbjct: 221 IHRDLAARNILLSENNVVKICDFGLARDIY-KNPDYVRKGDTRLPLK----WMAPESIFD 275
Query: 947 QRITEKSDVYSFGVVLLEVLT 967
+ + KSDV+S+GV+L E+ +
Sbjct: 276 KIYSTKSDVWSYGVLLWEIFS 296
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 87/208 (41%), Gaps = 22/208 (10%)
Query: 774 IGTGSSGVVYR-VTIPNGETLAV----KKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGW 828
+G G+ VV R V + G+ A K S+ + E + ++H NIVRL
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 829 GSNKNLKLLFYDYLPNGSL-SSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
S + L +D + G L ++ AD + +L A LH M ++
Sbjct: 79 ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILE-----AVLHCHQMG-VV 132
Query: 888 HGDVKAMNVLLG---PGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
H ++K N+LL G LADFGLA V G AG+ GY++PE
Sbjct: 133 HRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG-------FAGTPGYLSPEVL 185
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPL 972
+ D+++ GV+L +L G P
Sbjct: 186 RKDPYGKPVDLWACGVILYILLVGYPPF 213
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 19 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 78
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 79 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 138
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 139 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 190
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 191 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 22/217 (10%)
Query: 763 DVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD--ESGAFSSEIQTLGSIRH 819
++ + V+G+G+ V+ V G+ A+K + S + +EI L I+H
Sbjct: 6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKH 65
Query: 820 KNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879
+NIV L + L + G L + +G + V+ V A+ YLH
Sbjct: 66 ENIVTLEDIYESTTHYYLVMQLVSGGELFDRI--LERGVYTEKDASLVIQQVLSAVKYLH 123
Query: 880 HDCMPPILHGDVKAMNVL-LGP--GYQAYLADFGLARI-VSGSGDDNCSKTNQRPQLAGS 935
+ I+H D+K N+L L P + + DFGL+++ +G C G+
Sbjct: 124 EN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTAC----------GT 170
Query: 936 YGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
GY+APE + + ++ D +S GV+ +L G P
Sbjct: 171 PGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPF 207
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 19 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 78
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 79 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 138
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 139 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 190
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 191 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 13 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 72
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 73 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 132
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 133 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 184
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 185 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 18/169 (10%)
Query: 809 SEIQTLGSIRHKNIVRLLGWGSNKNLKLLF--YDYLPNGSLSSLLHGAGKGGADWEARYE 866
EI L + H N+V+L+ + N L+ ++ + G + + K ++ +AR+
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV--PTLKPLSEDQARF- 141
Query: 867 VVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKT 926
+ + YLH+ I+H D+K N+L+G +ADFG++ GS D S T
Sbjct: 142 YFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGS-DALLSNT 197
Query: 927 NQRPQLAGSYGYMAPEHASMQRIT---EKSDVYSFGVVLLEVLTGRHPL 972
G+ +MAPE S R + DV++ GV L + G+ P
Sbjct: 198 ------VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 100/238 (42%), Gaps = 33/238 (13%)
Query: 764 VVRNLTSANVIGTGSSGVV---YRVTIPNGETLAVKKM----WSSDESGAFSSEIQTLGS 816
V++ + IG+G+ G+V Y + +A+KK+ + + E+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKX 79
Query: 817 IRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR----YEVVLGV 871
+ HKNI+ LL + K L+ YL + + L + D E Y+++ G+
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGI 139
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQ 931
H LH I+H D+K N+++ + DFGLAR S P
Sbjct: 140 KH----LHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS-------FMMTPY 185
Query: 932 LAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLM 989
+ Y Y APE E D++S G ++ E++ RH + PG + QW ++
Sbjct: 186 VVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMV--RHKI--LFPGRDYIDQWNKVI 238
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 27/213 (12%)
Query: 772 NVIGTGSSG-VVYRVTIPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
V+G GS G V+ G+ AVK ++ + + E+Q L + H NI++L
Sbjct: 55 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 114
Query: 826 LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPP 885
+ +K L + G L + + AR ++ V + Y+H +
Sbjct: 115 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYMHKN---K 169
Query: 886 ILHGDVKAMNVLL---GPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPE 942
I+H D+K N+LL + DFGL+ S + ++ +Y Y+APE
Sbjct: 170 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-------KKMKDKIGTAY-YIAPE 221
Query: 943 --HASMQRITEKSDVYSFGVVLLEVLTGRHPLD 973
H + EK DV+S GV+L +L+G P +
Sbjct: 222 VLHGTYD---EKCDVWSTGVILYILLSGCPPFN 251
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 7 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 127 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 178
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 179 MTG------YVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 7 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDH 126
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 127 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 178
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 179 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 7 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 127 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 178
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 179 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 27 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 86
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 87 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 146
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 147 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 198
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 199 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 18 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 77
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 78 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 137
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 138 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 189
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 190 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 95/248 (38%), Gaps = 50/248 (20%)
Query: 767 NLTSANVIGTGSSGVVYRVTIPNGE-TLAVKKMWSSDES----GAFSSEIQTLGSIRHKN 821
N ++IG GS G VY N E +A+KK+ E EI L ++
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 86
Query: 822 IVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYE--VVLGVAHALAYLH 879
I+RL ++ D L L +L A +D + ++ + L H L+
Sbjct: 87 IIRLYDL-------IIPDDLLKFDELYIVLEIAD---SDLKKLFKTPIFLTEEHIKTILY 136
Query: 880 HDCMPP-------ILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNC--------- 923
+ + I+H D+K N LL + DFGLAR ++ D N
Sbjct: 137 NLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEE 196
Query: 924 ---SKTNQRPQLAG---SYGYMAPEHASMQRITEKS-DVYSFGVVLLEVL---------- 966
N + QL + Y APE +Q KS D++S G + E+L
Sbjct: 197 PGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDP 256
Query: 967 TGRHPLDP 974
T R PL P
Sbjct: 257 TNRFPLFP 264
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 101/238 (42%), Gaps = 33/238 (13%)
Query: 764 VVRNLTSANVIGTGSSGVV---YRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGS 816
V++ + IG+G+ G+V Y + +A+KK+ ++ + E+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKX 79
Query: 817 IRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR----YEVVLGV 871
+ HKNI+ LL + K L+ YL + + L + D E Y+++ G+
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGI 139
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQ 931
H LH I+H D+K N+++ + DFGLAR S P
Sbjct: 140 KH----LHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS-------FMMTPY 185
Query: 932 LAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLM 989
+ Y Y APE E D++S G ++ E++ RH + PG + QW ++
Sbjct: 186 VVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMV--RHKI--LFPGRDYIDQWNKVI 238
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 887 LHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM 946
+H D+ A N+LL + DFGLAR + D K + R L +MAPE
Sbjct: 220 IHRDLAARNILLSEKNVVKICDFGLARDIY-KDPDYVRKGDARLPLK----WMAPETIFD 274
Query: 947 QRITEKSDVYSFGVVLLEVLT 967
+ T +SDV+SFGV+L E+ +
Sbjct: 275 RVYTIQSDVWSFGVLLWEIFS 295
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 887 LHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM 946
+H D+ A N+LL + DFGLAR + D K + R L +MAPE
Sbjct: 215 IHRDLAARNILLSEKNVVKICDFGLARDIY-KDPDYVRKGDARLPLK----WMAPETIFD 269
Query: 947 QRITEKSDVYSFGVVLLEVLT 967
+ T +SDV+SFGV+L E+ +
Sbjct: 270 RVYTIQSDVWSFGVLLWEIFS 290
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 9 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 68
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 69 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 128
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 129 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 180
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 181 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 101/238 (42%), Gaps = 33/238 (13%)
Query: 764 VVRNLTSANVIGTGSSGVV---YRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGS 816
V++ + IG+G+ G+V Y + +A+KK+ ++ + E+ +
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKC 80
Query: 817 IRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR----YEVVLGV 871
+ HKNI+ LL + K L+ YL + + L + D E Y+++ G+
Sbjct: 81 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 140
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQ 931
H LH I+H D+K N+++ + DFGLAR S P
Sbjct: 141 KH----LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-------FMMTPY 186
Query: 932 LAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLM 989
+ Y Y APE E D++S G ++ E++ RH + PG + QW ++
Sbjct: 187 VVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMV--RHKI--LFPGRDYIDQWNKVI 239
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 887 LHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM 946
+H D+ A N+LL + DFGLAR + D K + R L +MAPE
Sbjct: 222 IHRDLAARNILLSEKNVVKICDFGLARDIY-KDPDYVRKGDARLPLK----WMAPETIFD 276
Query: 947 QRITEKSDVYSFGVVLLEVLT 967
+ T +SDV+SFGV+L E+ +
Sbjct: 277 RVYTIQSDVWSFGVLLWEIFS 297
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 887 LHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM 946
+H D+ A N+LL + DFGLAR + D K + R L +MAPE
Sbjct: 213 IHRDLAARNILLSEKNVVKICDFGLARDIY-KDPDYVRKGDARLPLK----WMAPETIFD 267
Query: 947 QRITEKSDVYSFGVVLLEVLT 967
+ T +SDV+SFGV+L E+ +
Sbjct: 268 RVYTIQSDVWSFGVLLWEIFS 288
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 101/238 (42%), Gaps = 33/238 (13%)
Query: 764 VVRNLTSANVIGTGSSGVV---YRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGS 816
V++ + IG+G+ G+V Y + +A+KK+ ++ + E+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKC 79
Query: 817 IRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR----YEVVLGV 871
+ HKNI+ LL + K L+ YL + + L + D E Y+++ G+
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQ 931
H LH I+H D+K N+++ + DFGLAR S P
Sbjct: 140 KH----LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-------FMMTPY 185
Query: 932 LAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLM 989
+ Y Y APE E D++S G ++ E++ RH + PG + QW ++
Sbjct: 186 VVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMV--RHKI--LFPGRDYIDQWNKVI 238
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 101/238 (42%), Gaps = 33/238 (13%)
Query: 764 VVRNLTSANVIGTGSSGVV---YRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGS 816
V++ + IG+G+ G+V Y + +A+KK+ ++ + E+ +
Sbjct: 15 VLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKC 72
Query: 817 IRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR----YEVVLGV 871
+ HKNI+ LL + K L+ YL + + L + D E Y+++ G+
Sbjct: 73 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGI 132
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQ 931
H LH I+H D+K N+++ + DFGLAR S P
Sbjct: 133 KH----LHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS-------FMMTPY 178
Query: 932 LAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLM 989
+ Y Y APE E D++S G ++ E++ RH + PG + QW ++
Sbjct: 179 VVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMV--RHKI--LFPGRDYIDQWNKVI 231
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 12 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 71
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 72 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 131
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 132 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 183
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 184 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 772 NVIGTGS-SGVVYRVTIPNGETLAVK---KMWSSDESGAFSSEIQTLGSIRHKNIVRLLG 827
+V+GTG+ S V+ + +A+K K + G+ +EI L I+H NIV L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ L + G L + KG ++ V A+ YLH I+
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRI--VEKGFYTERDASRLIFQVLDAVKYLHD---LGIV 138
Query: 888 HGDVKAMNVL---LGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
H D+K N+L L + ++DFGL+++ +D S + G+ GY+APE
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKM-----EDPGSVLSTA---CGTPGYVAPEVL 190
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPL 972
+ + ++ D +S GV+ +L G P
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 6 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 65
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 66 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 125
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 126 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 177
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 178 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 30 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 89
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 90 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 149
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 150 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 201
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 202 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 14 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 73
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 74 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 133
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 134 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 185
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 186 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 4 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 63
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 64 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 123
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 124 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 175
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 176 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 101/238 (42%), Gaps = 33/238 (13%)
Query: 764 VVRNLTSANVIGTGSSGVV---YRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGS 816
V++ + IG+G+ G+V Y + +A+KK+ ++ + E+ +
Sbjct: 21 VLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKC 78
Query: 817 IRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR----YEVVLGV 871
+ HKNI+ LL + K L+ YL + + L + D E Y+++ G+
Sbjct: 79 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 138
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQ 931
H LH I+H D+K N+++ + DFGLAR S P
Sbjct: 139 KH----LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-------FMMTPY 184
Query: 932 LAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLM 989
+ Y Y APE E D++S G ++ E++ RH + PG + QW ++
Sbjct: 185 VVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMV--RHKI--LFPGRDYIDQWNKVI 237
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 3 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 62
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 63 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 122
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 123 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 174
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 175 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 27/213 (12%)
Query: 772 NVIGTGSSG-VVYRVTIPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
V+G GS G V+ G+ AVK ++ + + E+Q L + H NI++L
Sbjct: 56 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 115
Query: 826 LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPP 885
+ +K L + G L + + AR ++ V + Y+H +
Sbjct: 116 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYMHKN---K 170
Query: 886 ILHGDVKAMNVLL---GPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPE 942
I+H D+K N+LL + DFGL+ S + ++ +Y Y+APE
Sbjct: 171 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-------KKMKDKIGTAY-YIAPE 222
Query: 943 --HASMQRITEKSDVYSFGVVLLEVLTGRHPLD 973
H + EK DV+S GV+L +L+G P +
Sbjct: 223 VLHGTYD---EKCDVWSTGVILYILLSGCPPFN 252
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 7 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 127 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 178
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 179 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 28/215 (13%)
Query: 766 RNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGSIRHK 820
+ S +G+G+ G V + +GE +A+KK+ +S F+ E+ L ++H+
Sbjct: 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE 83
Query: 821 NIVRLLGWGSNKNLKLLFYD-YLPNGSLSSLLHG-AGKGGADWEARYEVVLGVAHALAYL 878
N++ LL + + FYD YL + + L G ++ + +Y +V + L Y+
Sbjct: 84 NVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQY-LVYQMLKGLKYI 142
Query: 879 HHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAG---S 935
H ++H D+K N+ + + + DFGLAR ++ G +
Sbjct: 143 HS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHADA-------------EMTGYVVT 186
Query: 936 YGYMAPEHA-SMQRITEKSDVYSFGVVLLEVLTGR 969
Y APE S + D++S G ++ E+LTG+
Sbjct: 187 RWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 101/238 (42%), Gaps = 33/238 (13%)
Query: 764 VVRNLTSANVIGTGSSGVV---YRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGS 816
V++ + IG+G+ G+V Y + +A+KK+ ++ + E+ +
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKC 80
Query: 817 IRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR----YEVVLGV 871
+ HKNI+ LL + K L+ YL + + L + D E Y+++ G+
Sbjct: 81 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 140
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQ 931
H LH I+H D+K N+++ + DFGLAR S P
Sbjct: 141 KH----LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-------FMMTPY 186
Query: 932 LAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLM 989
+ Y Y APE E D++S G ++ E++ RH + PG + QW ++
Sbjct: 187 VVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMV--RHKI--LFPGRDYIDQWNKVI 239
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 7 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 127 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 178
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 179 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 101/238 (42%), Gaps = 33/238 (13%)
Query: 764 VVRNLTSANVIGTGSSGVV---YRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGS 816
V++ + IG+G+ G+V Y + +A+KK+ ++ + E+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKC 79
Query: 817 IRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR----YEVVLGV 871
+ HKNI+ LL + K L+ YL + + L + D E Y+++ G+
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQ 931
H LH I+H D+K N+++ + DFGLAR S P
Sbjct: 140 KH----LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-------FMMTPY 185
Query: 932 LAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLM 989
+ Y Y APE E D++S G ++ E++ RH + PG + QW ++
Sbjct: 186 VVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMV--RHKI--LFPGRDYIDQWNKVI 238
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 26 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 85
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 86 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 145
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 146 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 197
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 198 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 5 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 64
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 65 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 124
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 125 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 176
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 177 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 84/200 (42%), Gaps = 34/200 (17%)
Query: 786 TIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNG 845
T N + +++K + F +E+Q + I+++ + G +N + + Y+Y+ N
Sbjct: 74 TKSNNDKISIKSKYDD-----FKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMEND 128
Query: 846 SLSSLLHGAGKGGADW------EARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLG 899
S+ ++ + ++ V ++ +Y+H++ I H DVK N+L+
Sbjct: 129 SILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMD 186
Query: 900 PGYQAYLADFG-----LARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITE--K 952
+ L+DFG + + + GS G+Y +M PE S + K
Sbjct: 187 KNGRVKLSDFGESEYMVDKKIKGS--------------RGTYEFMPPEFFSNESSYNGAK 232
Query: 953 SDVYSFGVVLLEVLTGRHPL 972
D++S G+ L + P
Sbjct: 233 VDIWSLGICLYVMFYNVVPF 252
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 4 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 63
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 64 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 123
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 124 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 175
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 176 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 13 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 72
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 73 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 132
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 133 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLAR----HTDDE 184
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 185 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 9 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 68
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 69 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 128
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 129 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLAR----HTDDE 180
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 181 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 101/238 (42%), Gaps = 33/238 (13%)
Query: 764 VVRNLTSANVIGTGSSGVV---YRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGS 816
V++ + IG+G+ G+V Y + +A+KK+ ++ + E+ +
Sbjct: 60 VLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKC 117
Query: 817 IRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR----YEVVLGV 871
+ HKNI+ LL + K L+ YL + + L + D E Y+++ G+
Sbjct: 118 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 177
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQ 931
H LH I+H D+K N+++ + DFGLAR S P
Sbjct: 178 KH----LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-------FMMTPY 223
Query: 932 LAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLM 989
+ Y Y APE E D++S G ++ E++ RH + PG + QW ++
Sbjct: 224 VVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMV--RHKI--LFPGRDYIDQWNKVI 276
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 12 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 71
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 72 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 131
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 132 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 183
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 184 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 9 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 68
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 69 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 128
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 129 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 180
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 181 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 100/238 (42%), Gaps = 33/238 (13%)
Query: 764 VVRNLTSANVIGTGSSGVV---YRVTIPNGETLAVKKM----WSSDESGAFSSEIQTLGS 816
V++ + IG+G+ G+V Y + +A+KK+ + + E+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKX 79
Query: 817 IRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR----YEVVLGV 871
+ HKNI+ LL + K L+ YL + + L + D E Y+++ G+
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQ 931
H LH I+H D+K N+++ + DFGLAR S P
Sbjct: 140 KH----LHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS-------FMMTPY 185
Query: 932 LAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLM 989
+ Y Y APE E D++S G ++ E++ RH + PG + QW ++
Sbjct: 186 VVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMV--RHKI--LFPGRDYIDQWNKVI 238
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 101/238 (42%), Gaps = 33/238 (13%)
Query: 764 VVRNLTSANVIGTGSSGVV---YRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGS 816
V++ + IG+G+ G+V Y + +A+KK+ ++ + E+ +
Sbjct: 15 VLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKC 72
Query: 817 IRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR----YEVVLGV 871
+ HKNI+ LL + K L+ YL + + L + D E Y+++ G+
Sbjct: 73 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 132
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQ 931
H LH I+H D+K N+++ + DFGLAR S P
Sbjct: 133 KH----LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-------FMMTPY 178
Query: 932 LAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLM 989
+ Y Y APE E D++S G ++ E++ RH + PG + QW ++
Sbjct: 179 VVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMV--RHKI--LFPGRDYIDQWNKVI 231
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 53/208 (25%), Positives = 89/208 (42%), Gaps = 20/208 (9%)
Query: 772 NVIGTGSSGVVYRVTIPNGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLG 827
+V+GTG+ V + L K + + + G+ +EI L I+H NIV L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ L + G L + KG ++ V A+ YLH I+
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRI--VEKGFYTERDASRLIFQVLDAVKYLHD---LGIV 138
Query: 888 HGDVKAMNVL---LGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
H D+K N+L L + ++DFGL+++ +D S + G+ GY+APE
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKM-----EDPGSVLSTA---CGTPGYVAPEVL 190
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPL 972
+ + ++ D +S GV+ +L G P
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 53/208 (25%), Positives = 89/208 (42%), Gaps = 20/208 (9%)
Query: 772 NVIGTGSSGVVYRVTIPNGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLG 827
+V+GTG+ V + L K + + + G+ +EI L I+H NIV L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ L + G L + KG ++ V A+ YLH I+
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRI--VEKGFYTERDASRLIFQVLDAVKYLHD---LGIV 138
Query: 888 HGDVKAMNVL---LGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
H D+K N+L L + ++DFGL+++ +D S + G+ GY+APE
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKM-----EDPGSVLSTA---CGTPGYVAPEVL 190
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPL 972
+ + ++ D +S GV+ +L G P
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 53/208 (25%), Positives = 89/208 (42%), Gaps = 20/208 (9%)
Query: 772 NVIGTGSSGVVYRVTIPNGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLG 827
+V+GTG+ V + L K + + + G+ +EI L I+H NIV L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ L + G L + KG ++ V A+ YLH I+
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRI--VEKGFYTERDASRLIFQVLDAVKYLHD---LGIV 138
Query: 888 HGDVKAMNVL---LGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
H D+K N+L L + ++DFGL+++ +D S + G+ GY+APE
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKM-----EDPGSVLSTA---CGTPGYVAPEVL 190
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPL 972
+ + ++ D +S GV+ +L G P
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 101/238 (42%), Gaps = 33/238 (13%)
Query: 764 VVRNLTSANVIGTGSSGVV---YRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGS 816
V++ + IG+G+ G+V Y + +A+KK+ ++ + E+ +
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKC 73
Query: 817 IRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR----YEVVLGV 871
+ HKNI+ LL + K L+ YL + + L + D E Y+++ G+
Sbjct: 74 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 133
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQ 931
H LH I+H D+K N+++ + DFGLAR S P
Sbjct: 134 KH----LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-------FMMTPY 179
Query: 932 LAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLM 989
+ Y Y APE E D++S G ++ E++ RH + PG + QW ++
Sbjct: 180 VVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMV--RHKI--LFPGRDYIDQWNKVI 232
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 101/238 (42%), Gaps = 33/238 (13%)
Query: 764 VVRNLTSANVIGTGSSGVV---YRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGS 816
V++ + IG+G+ G+V Y + +A+KK+ ++ + E+ +
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKC 73
Query: 817 IRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR----YEVVLGV 871
+ HKNI+ LL + K L+ YL + + L + D E Y+++ G+
Sbjct: 74 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 133
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQ 931
H LH I+H D+K N+++ + DFGLAR S P
Sbjct: 134 KH----LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-------FMMTPY 179
Query: 932 LAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLM 989
+ Y Y APE E D++S G ++ E++ RH + PG + QW ++
Sbjct: 180 VVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMV--RHKI--LFPGRDYIDQWNKVI 232
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 74/173 (42%), Gaps = 19/173 (10%)
Query: 804 SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEA 863
SGA E+ L + H NI++L + +K L + G L + K E
Sbjct: 48 SGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFS---EV 104
Query: 864 RYEVVLG-VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYL---ADFGLARIVSGSG 919
V++ V YLH I+H D+K N+LL + L DFGL+ G
Sbjct: 105 DAAVIMKQVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG 161
Query: 920 DDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
+ +L +Y Y+APE ++ EK DV+S GV+L +L G P
Sbjct: 162 -------KMKERLGTAY-YIAPE-VLRKKYDEKCDVWSCGVILYILLCGYPPF 205
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 14 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 73
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 74 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 133
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR + D+
Sbjct: 134 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEM 186
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
R Y APE + + D++S G ++ E+LTGR
Sbjct: 187 TGYVATR-------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 14 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 73
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 74 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 133
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR + D+
Sbjct: 134 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEM 186
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
R Y APE + + D++S G ++ E+LTGR
Sbjct: 187 TGYVATR-------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 23/213 (10%)
Query: 772 NVIGTGSSGVVYRVT-IPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
IGTGS G V V + G A+K K+ + +E + L ++ +V+L
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 826 -LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
+ N NL ++ +Y+P G + S L G+ ++ AR+ + YLH
Sbjct: 107 EFSFKDNSNLYMVM-EYMPGGDMFSHLRRIGRF-SEPHARF-YAAQIVLTFEYLHS---L 160
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+++ D+K N+L+ +ADFG A+ V G C G+ Y+APE
Sbjct: 161 DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC----------GTPEYLAPEII 210
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
+ + D ++ GV++ E+ G P P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 13 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 72
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 73 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 132
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 133 VQF-LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 184
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 185 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 23/213 (10%)
Query: 772 NVIGTGSSGVVYRVT-IPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
IGTGS G V V + G A+K K+ + +E + L ++ +V+L
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 826 -LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
+ N NL ++ +Y+P G + S L G+ ++ AR+ + YLH
Sbjct: 107 EFSFKDNSNLYMVM-EYMPGGDMFSHLRRIGRF-SEPHARF-YAAQIVLTFEYLHS---L 160
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+++ D+K N+L+ +ADFG A+ V G C G+ Y+APE
Sbjct: 161 DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC----------GTPEYLAPEII 210
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
+ + D ++ GV++ E+ G P P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 14 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 73
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 74 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 133
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR + D+
Sbjct: 134 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEM 186
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
R Y APE + + D++S G ++ E+LTGR
Sbjct: 187 TGYVATR-------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 91/217 (41%), Gaps = 29/217 (13%)
Query: 764 VVRNLTSANVIGTGSSGVV---YRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGS 816
V++ IG+G+ G+V + + G +AVKK+ ++ + E+ L
Sbjct: 22 VLKRYQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLKC 79
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDY-----LPNGSLSSLLHGAGKGGADWEARYEVVLGV 871
+ HKNI+ LL + + F D L + +L ++H Y+++ G+
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGI 139
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQ 931
H LH I+H D+K N+++ + DFGLAR C+ P
Sbjct: 140 KH----LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-------CTNFMMTPY 185
Query: 932 LAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTG 968
+ Y Y APE D++S G ++ E++ G
Sbjct: 186 VVTRY-YRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 30 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 89
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 90 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 149
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGLAR DD
Sbjct: 150 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 201
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ Y APE + + D++S G ++ E+LTGR
Sbjct: 202 MXG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 23/213 (10%)
Query: 772 NVIGTGSSGVVYRVT-IPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
IGTGS G V V + G A+K K+ + +E + L ++ +V+L
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 826 -LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
+ N NL ++ +Y+P G + S L G+ ++ AR+ + YLH
Sbjct: 107 EFSFKDNSNLYMVM-EYVPGGEMFSHLRRIGRF-SEPHARF-YAAQIVLTFEYLHS---L 160
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+++ D+K N+L+ +ADFG A+ V G C G+ Y+APE
Sbjct: 161 DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC----------GTPEYLAPEII 210
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
+ + D ++ GV++ E+ G P P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 29/217 (13%)
Query: 764 VVRNLTSANVIGTGSSGVV---YRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGS 816
V++ IG+G+ G+V + + G +AVKK+ ++ + E+ L
Sbjct: 20 VLKRYQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLKC 77
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDY-----LPNGSLSSLLHGAGKGGADWEARYEVVLGV 871
+ HKNI+ LL + + F D L + +L ++H Y+++ G+
Sbjct: 78 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGI 137
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQ 931
H LH I+H D+K N+++ + DFGLAR S + P
Sbjct: 138 KH----LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAS-------TNFMMTPY 183
Query: 932 LAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTG 968
+ Y Y APE E D++S G ++ E++ G
Sbjct: 184 VVTRY-YRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 17/123 (13%)
Query: 866 EVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSK 925
++ + + AL +LH ++H DVK NVL+ Q DFG +SG D+ +K
Sbjct: 140 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFG----ISGYLVDDVAK 193
Query: 926 TNQRPQLAGSYGYMAPE----HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAP 981
AG Y APE + + + KSD++S G+ +E+ R P D G P
Sbjct: 194 DID----AGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSW---GTP 246
Query: 982 LVQ 984
Q
Sbjct: 247 FQQ 249
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 79/200 (39%), Gaps = 17/200 (8%)
Query: 773 VIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNK 832
++ ++G Y + I E + K DE +E + L + RH + L +
Sbjct: 23 LVREKATGRYYAMKILRKEVIIAK-----DEVAHTVTESRVLQNTRHP-FLTALKYAFQT 76
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ +L F NG + + AR+ + AL YLH +++ D+K
Sbjct: 77 HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA-EIVSALEYLHSR---DVVYRDIK 132
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
N++L + DFGL + G D KT G+ Y+APE
Sbjct: 133 LENLMLDKDGHIKITDFGLCK--EGISDGATMKT-----FCGTPEYLAPEVLEDNDYGRA 185
Query: 953 SDVYSFGVVLLEVLTGRHPL 972
D + GVV+ E++ GR P
Sbjct: 186 VDWWGLGVVMYEMMCGRLPF 205
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 102/238 (42%), Gaps = 33/238 (13%)
Query: 764 VVRNLTSANVIGTGSSGVV---YRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGS 816
V++ + IG+G+ G+V Y + +A+KK+ ++ + E+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKV 79
Query: 817 IRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR----YEVVLGV 871
+ HKNI+ LL + K+L+ Y+ + + L + D E Y++++G+
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGI 139
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQ 931
H LH I+H D+K N+++ + DFGLAR S P
Sbjct: 140 KH----LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTS-------FMMTPY 185
Query: 932 LAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLM 989
+ Y Y APE E D++S GV++ E++ G PG + QW ++
Sbjct: 186 VVTRY-YRAPEVILGMGYKENVDIWSVGVIMGEMIKG----GVLFPGTDHIDQWNKVI 238
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 7 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDH 126
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DFGL R DD
Sbjct: 127 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLCR----HTDDE 178
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 179 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 33/215 (15%)
Query: 773 VIGTGSSGVVY----RVTIPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIV 823
V+G GS G V ++T G+ AVK ++ + + E+Q L + H NI+
Sbjct: 39 VLGKGSFGEVILCKDKIT---GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 95
Query: 824 RLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCM 883
+L + +K L + G L + + AR ++ V + Y+H +
Sbjct: 96 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYMHKN-- 151
Query: 884 PPILHGDVKAMNVLL---GPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMA 940
I+H D+K N+LL + DFGL+ S + ++ +Y Y+A
Sbjct: 152 -KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-------KKMKDKIGTAY-YIA 202
Query: 941 PE--HASMQRITEKSDVYSFGVVLLEVLTGRHPLD 973
PE H + EK DV+S GV+L +L+G P +
Sbjct: 203 PEVLHGTYD---EKCDVWSTGVILYILLSGCPPFN 234
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 11/164 (6%)
Query: 809 SEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVV 868
+E Q L + + +V L K+ L + G L ++ G+ G
Sbjct: 233 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYA 292
Query: 869 LGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQ 928
+ L LH + I++ D+K N+LL ++D GLA V G +
Sbjct: 293 AEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVP-EGQTIKGRV-- 346
Query: 929 RPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
G+ GYMAPE +R T D ++ G +L E++ G+ P
Sbjct: 347 -----GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 101/238 (42%), Gaps = 33/238 (13%)
Query: 764 VVRNLTSANVIGTGSSGVV---YRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGS 816
V++ + IG+G+ G+V Y + +A+KK+ ++ + E+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKC 79
Query: 817 IRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR----YEVVLGV 871
+ HKNI+ LL + K+L+ Y+ + + L + D E Y+++ G+
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQ 931
H LH I+H D+K N+++ + DFGLAR S P+
Sbjct: 140 KH----LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-------FMMTPE 185
Query: 932 LAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLM 989
+ Y Y APE E D++S G ++ E++ G PG + QW ++
Sbjct: 186 VVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG----GVLFPGTDHIDQWNKVI 238
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 79/200 (39%), Gaps = 17/200 (8%)
Query: 773 VIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNK 832
++ ++G Y + I E + K DE +E + L + RH + L +
Sbjct: 26 LVREKATGRYYAMKILRKEVIIAK-----DEVAHTVTESRVLQNTRHPFLT-ALKYAFQT 79
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ +L F NG + + AR+ + AL YLH +++ D+K
Sbjct: 80 HDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLHSR---DVVYRDIK 135
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
N++L + DFGL + G D KT G+ Y+APE
Sbjct: 136 LENLMLDKDGHIKITDFGLCK--EGISDGATMKT-----FCGTPEYLAPEVLEDNDYGRA 188
Query: 953 SDVYSFGVVLLEVLTGRHPL 972
D + GVV+ E++ GR P
Sbjct: 189 VDWWGLGVVMYEMMCGRLPF 208
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 12/92 (13%)
Query: 874 ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
ALA+LH + +H DVK N+ LGP + L DFGL + +G + + R
Sbjct: 169 ALAHLHSQGL---VHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPR---- 221
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEV 965
YMAPE T +DV+S G+ +LEV
Sbjct: 222 ----YMAPELLQGSYGT-AADVFSLGLTILEV 248
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 104/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 7 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + D+GLAR DD
Sbjct: 127 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLAR----HTDDE 178
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 179 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 11/164 (6%)
Query: 809 SEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVV 868
+E Q L + + +V L K+ L + G L ++ G+ G
Sbjct: 233 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYA 292
Query: 869 LGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQ 928
+ L LH + I++ D+K N+LL ++D GLA V G +
Sbjct: 293 AEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVP-EGQTIKGRV-- 346
Query: 929 RPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
G+ GYMAPE +R T D ++ G +L E++ G+ P
Sbjct: 347 -----GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 102/238 (42%), Gaps = 33/238 (13%)
Query: 764 VVRNLTSANVIGTGSSGVV---YRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGS 816
V++ + IG+G+ G+V Y + +A+KK+ ++ + E+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKV 79
Query: 817 IRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR----YEVVLGV 871
+ HKNI+ LL + K+L+ Y+ + + L + D E Y++++G+
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGI 139
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQ 931
H LH I+H D+K N+++ + DFGLAR S P
Sbjct: 140 KH----LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTS-------FMMTPY 185
Query: 932 LAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLM 989
+ Y Y APE E D++S GV++ E++ G PG + QW ++
Sbjct: 186 VVTRY-YRAPEVILGMGYKENVDIWSVGVIMGEMIKG----GVLFPGTDHIDQWNKVI 238
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 27/213 (12%)
Query: 772 NVIGTGSSG-VVYRVTIPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
V+G GS G V+ G+ AVK ++ + + E+Q L + H NI +L
Sbjct: 32 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKL 91
Query: 826 LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPP 885
+ +K L + G L + + AR ++ V + Y H +
Sbjct: 92 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYXHKN---K 146
Query: 886 ILHGDVKAMNVLL---GPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPE 942
I+H D+K N+LL + DFGL+ S + ++ +Y Y+APE
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-------KKXKDKIGTAY-YIAPE 198
Query: 943 --HASMQRITEKSDVYSFGVVLLEVLTGRHPLD 973
H + EK DV+S GV+L +L+G P +
Sbjct: 199 VLHGTYD---EKCDVWSTGVILYILLSGCPPFN 228
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 12/134 (8%)
Query: 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLG 899
+Y+ G L + GK Y + + L +LH I++ D+K NV+L
Sbjct: 100 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIG--LFFLHKRG---IIYRDLKLDNVMLD 154
Query: 900 PGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFG 959
+ADFG+ + G R + G+ Y+APE + Q + D +++G
Sbjct: 155 SEGHIKIADFGMCKEHMMDG------VTTR-EFCGTPDYIAPEIIAYQPYGKSVDWWAYG 207
Query: 960 VVLLEVLTGRHPLD 973
V+L E+L G+ P D
Sbjct: 208 VLLYEMLAGQPPFD 221
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 7 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 66
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + DF LAR DD
Sbjct: 127 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFYLAR----HTDDE 178
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 179 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 46/182 (25%), Positives = 72/182 (39%), Gaps = 27/182 (14%)
Query: 807 FSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLL------HGAGKGGAD 860
F E ++H N+V LLG + + + Y +G L L G D
Sbjct: 76 FRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDD 135
Query: 861 WEAR--------YEVVLGVAHALAYL--HHDCMPPILHGDVKAMNVLLGPGYQAYLADFG 910
+ +V +A + YL HH ++H D+ NVL+ ++D G
Sbjct: 136 RTVKSALEPPDFVHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLG 190
Query: 911 LARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GR 969
L R V + + P +MAPE + + SD++S+GVVL EV + G
Sbjct: 191 LFREVYAADYYKLLGNSLLP-----IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGL 245
Query: 970 HP 971
P
Sbjct: 246 QP 247
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 46/182 (25%), Positives = 72/182 (39%), Gaps = 27/182 (14%)
Query: 807 FSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLL------HGAGKGGAD 860
F E ++H N+V LLG + + + Y +G L L G D
Sbjct: 59 FRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDD 118
Query: 861 WEAR--------YEVVLGVAHALAYL--HHDCMPPILHGDVKAMNVLLGPGYQAYLADFG 910
+ +V +A + YL HH ++H D+ NVL+ ++D G
Sbjct: 119 RTVKSALEPPDFVHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLG 173
Query: 911 LARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GR 969
L R V + + P +MAPE + + SD++S+GVVL EV + G
Sbjct: 174 LFREVYAADYYKLLGNSLLP-----IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGL 228
Query: 970 HP 971
P
Sbjct: 229 QP 230
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 109/263 (41%), Gaps = 65/263 (24%)
Query: 738 MANNSFTADDTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVY-------------- 783
+ ++ FT W + ++ +I + + + +IG G G VY
Sbjct: 166 IESDKFTRFCQW-----KNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMK 220
Query: 784 -----RVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLF 838
R+ + GETLA+ + + +L S + + + + KL F
Sbjct: 221 CLDKKRIKMKQGETLALNERI-----------MLSLVSTGDCPFIVCMSYAFHTPDKLSF 269
Query: 839 YDYLPNGSLSSLLHGAGKGGADWEA--RY---EVVLGVAHALAYLHHDCMPPILHGDVKA 893
L NG L + + G EA R+ E++LG+ H +H+ +++ D+K
Sbjct: 270 ILDLMNGG--DLHYHLSQHGVFSEADMRFYAAEIILGLEH----MHNRF---VVYRDLKP 320
Query: 894 MNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA-GSYGYMAPEHASMQR---I 949
N+LL ++D GLA C + ++P + G++GYMAPE +Q+
Sbjct: 321 ANILLDEHGHVRISDLGLA----------CDFSKKKPHASVGTHGYMAPE--VLQKGVAY 368
Query: 950 TEKSDVYSFGVVLLEVLTGRHPL 972
+D +S G +L ++L G P
Sbjct: 369 DSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 109/263 (41%), Gaps = 65/263 (24%)
Query: 738 MANNSFTADDTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVY-------------- 783
+ ++ FT W + ++ +I + + + +IG G G VY
Sbjct: 166 IESDKFTRFCQW-----KNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMK 220
Query: 784 -----RVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLF 838
R+ + GETLA+ + + +L S + + + + KL F
Sbjct: 221 CLDKKRIKMKQGETLALNERI-----------MLSLVSTGDCPFIVCMSYAFHTPDKLSF 269
Query: 839 YDYLPNGSLSSLLHGAGKGGADWEA--RY---EVVLGVAHALAYLHHDCMPPILHGDVKA 893
L NG L + + G EA R+ E++LG+ H +H+ +++ D+K
Sbjct: 270 ILDLMNGG--DLHYHLSQHGVFSEADMRFYAAEIILGLEH----MHNRF---VVYRDLKP 320
Query: 894 MNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA-GSYGYMAPEHASMQR---I 949
N+LL ++D GLA C + ++P + G++GYMAPE +Q+
Sbjct: 321 ANILLDEHGHVRISDLGLA----------CDFSKKKPHASVGTHGYMAPE--VLQKGVAY 368
Query: 950 TEKSDVYSFGVVLLEVLTGRHPL 972
+D +S G +L ++L G P
Sbjct: 369 DSSADWFSLGCMLFKLLRGHSPF 391
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 93/235 (39%), Gaps = 31/235 (13%)
Query: 767 NLTSANVIGTGSSGVVYRVTIPNGETLAVK----KMWSSDESGAFSSEIQTLGSIRHKNI 822
L +IG G G VY +GE +A++ + + D+ AF E+ RH+N+
Sbjct: 34 QLEIGELIGKGRFGQVYHGRW-HGE-VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENV 91
Query: 823 VRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDC 882
V +G + + +L S++ A K D ++ + + YLH
Sbjct: 92 VLFMGACMSPPHLAIITSLCKGRTLYSVVRDA-KIVLDVNKTRQIAQEIVKGMGYLH--- 147
Query: 883 MPPILHGDVKAMNVLLGPGYQAYLADFGLARI----VSGSGDDNCSKTNQRPQLAGSYGY 938
ILH D+K+ NV G + + DFGL I +G +D N G +
Sbjct: 148 AKGILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQN------GWLCH 200
Query: 939 MAPE---------HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQ 984
+APE ++ SDV++ G + E+ P T P A + Q
Sbjct: 201 LAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFK-TQPAEAIIWQ 254
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 43.5 bits (101), Expect = 5e-04, Method: Composition-based stats.
Identities = 52/178 (29%), Positives = 78/178 (43%), Gaps = 21/178 (11%)
Query: 800 SSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGA 859
++ SGA E+ L + H NI++L + +K L + G L + K
Sbjct: 61 TTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFS- 119
Query: 860 DWEARYEVVLG-VAHALAYLH-HDCMPPILHGDVKAMNVLLGPGYQAYL---ADFGLARI 914
E V++ V YLH H+ I+H D+K N+LL + L DFGL+
Sbjct: 120 --EVDAAVIMKQVLSGTTYLHKHN----IVHRDLKPENLLLESKSRDALIKIVDFGLSAH 173
Query: 915 VSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
G K +R G+ Y+APE ++ EK DV+S GV+L +L G P
Sbjct: 174 FEVGG-----KMKER---LGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCGYPPF 222
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 103/219 (47%), Gaps = 29/219 (13%)
Query: 772 NVIGTGSSGVVYR-VTIPNGETLAVK---KMWSSDESGAFSSEIQTLGSIR-HKNIVRLL 826
+V+G G+ V + + + AVK K S F E++ L + H+N++ L+
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFR-EVEMLYQCQGHRNVLELI 77
Query: 827 GWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPI 886
+ ++ L ++ + GS+ S +H + + EA VV VA AL +LH+ I
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIHKR-RHFNELEASV-VVQDVASALDFLHNK---GI 132
Query: 887 LHGDVKAMNVLLGPGYQA---YLADFGLARIVSGSGDDNCSKTNQRPQL---AGSYGYMA 940
H D+K N+L Q + DF L + +GD CS + P+L GS YMA
Sbjct: 133 AHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGD--CSPIST-PELLTPCGSAEYMA 189
Query: 941 P-------EHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
P E AS+ ++ D++S GV+L +L+G P
Sbjct: 190 PEVVEAFSEEASI--YDKRCDLWSLGVILYILLSGYPPF 226
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 83/216 (38%), Gaps = 19/216 (8%)
Query: 765 VRNLTSANVIGTGSSGVVYRVTIPN-GETLAVKKM-----WSSDESGAFSSEIQTLGSIR 818
+ N V+G GS G V + G+ AVK + D+ +E + L R
Sbjct: 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR 81
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLG-VAHALAY 877
+ + L +L F NG L+ K EAR + AL +
Sbjct: 82 NHPFLTQLFCCFQTPDRLFFVMEFVNGG--DLMFHIQKSRRFDEARARFYAAEIISALMF 139
Query: 878 LHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYG 937
LH I++ D+K NVLL LADFG+ + +G + G+
Sbjct: 140 LHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTAT-------FCGTPD 189
Query: 938 YMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLD 973
Y+APE D ++ GV+L E+L G P +
Sbjct: 190 YIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 102/241 (42%), Gaps = 36/241 (14%)
Query: 756 KLDFSIDDVV---RNLTSANVIGTGSSGVVYRVTIPNGETLAVK---KMWSSD-----ES 804
+L ++DV+ + T ++G G G V + + VK KM +D +
Sbjct: 10 ELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDI 69
Query: 805 GAFSSEIQTLGSIRHKNIVRLLGWGSNKNLK------LLFYDYLPNGSLSSLLHGAGKGG 858
F E + H ++ +L+G K ++ ++ +G L + L + G
Sbjct: 70 EEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGE 129
Query: 859 ADW----EARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARI 914
+ + ++ +A + YL +H D+ A N +L +ADFGL+R
Sbjct: 130 NPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRK 186
Query: 915 VSGSGD---DNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRH 970
+ SGD C+ ++ P ++A E + T SDV++FGV + E++T G+
Sbjct: 187 IY-SGDYYRQGCA--SKLP-----VKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQT 238
Query: 971 P 971
P
Sbjct: 239 P 239
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 101/238 (42%), Gaps = 33/238 (13%)
Query: 764 VVRNLTSANVIGTGSSGVV---YRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGS 816
V++ + IG+G+ G+V Y + +A+KK+ ++ + E+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKC 79
Query: 817 IRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR----YEVVLGV 871
+ HKNI+ LL + K+L+ Y+ + + L + D E Y+++ G+
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQ 931
H LH I+H D+K N+++ + DFGLAR S P+
Sbjct: 140 KH----LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-------FMMEPE 185
Query: 932 LAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLM 989
+ Y Y APE E D++S G ++ E++ + PG + QW ++
Sbjct: 186 VVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVCHK----ILFPGRDYIDQWNKVI 238
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 23/111 (20%)
Query: 866 EVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSK 925
E++LG+ H +H+ +++ D+K N+LL ++D GLA C
Sbjct: 300 EIILGLEH----MHNRF---VVYRDLKPANILLDEHGHVRISDLGLA----------CDF 342
Query: 926 TNQRPQLA-GSYGYMAPEHASMQR---ITEKSDVYSFGVVLLEVLTGRHPL 972
+ ++P + G++GYMAPE +Q+ +D +S G +L ++L G P
Sbjct: 343 SKKKPHASVGTHGYMAPE--VLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 23/111 (20%)
Query: 866 EVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSK 925
E++LG+ H +H+ +++ D+K N+LL ++D GLA C
Sbjct: 299 EIILGLEH----MHNRF---VVYRDLKPANILLDEHGHVRISDLGLA----------CDF 341
Query: 926 TNQRPQLA-GSYGYMAPEHASMQR---ITEKSDVYSFGVVLLEVLTGRHPL 972
+ ++P + G++GYMAPE +Q+ +D +S G +L ++L G P
Sbjct: 342 SKKKPHASVGTHGYMAPE--VLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 83/211 (39%), Gaps = 23/211 (10%)
Query: 772 NVIGTGSSGVVYRVTIPNGETL----AVKKMWSSDESGAFSSEIQTLGSI-----RHKNI 822
VIG GS V V + + + VKK +D+ +QT + H +
Sbjct: 58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDI--DWVQTEKHVFEQASNHPFL 115
Query: 823 VRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDC 882
V L ++ +Y+ G L + K + Y + +A L YLH
Sbjct: 116 VGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLHERG 173
Query: 883 MPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPE 942
I++ D+K NVLL L D+G+ + GD + G+ Y+APE
Sbjct: 174 ---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST-------FCGTPNYIAPE 223
Query: 943 HASMQRITEKSDVYSFGVVLLEVLTGRHPLD 973
+ D ++ GV++ E++ GR P D
Sbjct: 224 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 43.5 bits (101), Expect = 7e-04, Method: Composition-based stats.
Identities = 49/200 (24%), Positives = 86/200 (43%), Gaps = 21/200 (10%)
Query: 778 SSGVVYRVT-IPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKL 836
S+G+ Y I ++ A ++ S +E E+ L + H N++ L N+ +
Sbjct: 35 STGLEYAAKFIKKRQSRASRRGVSREE---IEREVSILRQVLHHNVITLHDVYENRTDVV 91
Query: 837 LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNV 896
L + + G L L A K E + + + YLH I H D+K N+
Sbjct: 92 LILELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENI 146
Query: 897 LLG----PGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
+L P L DFGLA + +D N + G+ ++APE + + + +
Sbjct: 147 MLLDKNIPIPHIKLIDFGLAHEI----EDGVEFKN----IFGTPEFVAPEIVNYEPLGLE 198
Query: 953 SDVYSFGVVLLEVLTGRHPL 972
+D++S GV+ +L+G P
Sbjct: 199 ADMWSIGVITYILLSGASPF 218
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 43.5 bits (101), Expect = 7e-04, Method: Composition-based stats.
Identities = 49/200 (24%), Positives = 86/200 (43%), Gaps = 21/200 (10%)
Query: 778 SSGVVYRVT-IPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKL 836
S+G+ Y I ++ A ++ S +E E+ L + H N++ L N+ +
Sbjct: 35 STGLEYAAKFIKKRQSRASRRGVSREE---IEREVSILRQVLHHNVITLHDVYENRTDVV 91
Query: 837 LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNV 896
L + + G L L A K E + + + YLH I H D+K N+
Sbjct: 92 LILELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENI 146
Query: 897 LLG----PGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
+L P L DFGLA + +D N + G+ ++APE + + + +
Sbjct: 147 MLLDKNIPIPHIKLIDFGLAHEI----EDGVEFKN----IFGTPEFVAPEIVNYEPLGLE 198
Query: 953 SDVYSFGVVLLEVLTGRHPL 972
+D++S GV+ +L+G P
Sbjct: 199 ADMWSIGVITYILLSGASPF 218
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 43.5 bits (101), Expect = 7e-04, Method: Composition-based stats.
Identities = 49/200 (24%), Positives = 86/200 (43%), Gaps = 21/200 (10%)
Query: 778 SSGVVYRVT-IPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKL 836
S+G+ Y I ++ A ++ S +E E+ L + H N++ L N+ +
Sbjct: 35 STGLEYAAKFIKKRQSRASRRGVSREE---IEREVSILRQVLHHNVITLHDVYENRTDVV 91
Query: 837 LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNV 896
L + + G L L A K E + + + YLH I H D+K N+
Sbjct: 92 LILELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENI 146
Query: 897 LLG----PGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
+L P L DFGLA + +D N + G+ ++APE + + + +
Sbjct: 147 MLLDKNIPIPHIKLIDFGLAHEI----EDGVEFKN----IFGTPEFVAPEIVNYEPLGLE 198
Query: 953 SDVYSFGVVLLEVLTGRHPL 972
+D++S GV+ +L+G P
Sbjct: 199 ADMWSIGVITYILLSGASPF 218
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 43.5 bits (101), Expect = 7e-04, Method: Composition-based stats.
Identities = 49/200 (24%), Positives = 86/200 (43%), Gaps = 21/200 (10%)
Query: 778 SSGVVYRVT-IPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKL 836
S+G+ Y I ++ A ++ S +E E+ L + H N++ L N+ +
Sbjct: 35 STGLEYAAKFIKKRQSRASRRGVSREE---IEREVSILRQVLHHNVITLHDVYENRTDVV 91
Query: 837 LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNV 896
L + + G L L A K E + + + YLH I H D+K N+
Sbjct: 92 LILELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENI 146
Query: 897 LLG----PGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
+L P L DFGLA + +D N + G+ ++APE + + + +
Sbjct: 147 MLLDKNIPIPHIKLIDFGLAHEI----EDGVEFKN----IFGTPEFVAPEIVNYEPLGLE 198
Query: 953 SDVYSFGVVLLEVLTGRHPL 972
+D++S GV+ +L+G P
Sbjct: 199 ADMWSIGVITYILLSGASPF 218
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 43.5 bits (101), Expect = 7e-04, Method: Composition-based stats.
Identities = 49/200 (24%), Positives = 86/200 (43%), Gaps = 21/200 (10%)
Query: 778 SSGVVYRVT-IPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKL 836
S+G+ Y I ++ A ++ S +E E+ L + H N++ L N+ +
Sbjct: 35 STGLEYAAKFIKKRQSRASRRGVSREE---IEREVSILRQVLHHNVITLHDVYENRTDVV 91
Query: 837 LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNV 896
L + + G L L A K E + + + YLH I H D+K N+
Sbjct: 92 LILELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENI 146
Query: 897 LLG----PGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
+L P L DFGLA + +D N + G+ ++APE + + + +
Sbjct: 147 MLLDKNIPIPHIKLIDFGLAHEI----EDGVEFKN----IFGTPEFVAPEIVNYEPLGLE 198
Query: 953 SDVYSFGVVLLEVLTGRHPL 972
+D++S GV+ +L+G P
Sbjct: 199 ADMWSIGVITYILLSGASPF 218
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 70/158 (44%), Gaps = 15/158 (9%)
Query: 763 DVVRNLTSANVIGTGSSGVVYRVTIPNGETL--AVKKM--WSSDESGAFSSEIQTLGSIR 818
D+ + T N IG GS G V ++ + G + A KK+ + ++ F EI+ + S+
Sbjct: 6 DINQYYTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD 64
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSL-SSLLHGAGKGGADWEARYEVVLGVAHALAY 877
H NI+RL + L + G L ++H +D AR ++ V A+AY
Sbjct: 65 HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESD-AAR--IMKDVLSAVAY 121
Query: 878 LHHDCMPPILHGDVKAMNVLL---GPGYQAYLADFGLA 912
H + H D+K N L P L DFGLA
Sbjct: 122 CHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA 156
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 70/158 (44%), Gaps = 15/158 (9%)
Query: 763 DVVRNLTSANVIGTGSSGVVYRVTIPNGETL--AVKKM--WSSDESGAFSSEIQTLGSIR 818
D+ + T N IG GS G V ++ + G + A KK+ + ++ F EI+ + S+
Sbjct: 23 DINQYYTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD 81
Query: 819 HKNIVRLLGWGSNKNLKLLFYDYLPNGSL-SSLLHGAGKGGADWEARYEVVLGVAHALAY 877
H NI+RL + L + G L ++H +D AR ++ V A+AY
Sbjct: 82 HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESD-AAR--IMKDVLSAVAY 138
Query: 878 LHHDCMPPILHGDVKAMNVLL---GPGYQAYLADFGLA 912
H + H D+K N L P L DFGLA
Sbjct: 139 CHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA 173
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 99/233 (42%), Gaps = 29/233 (12%)
Query: 757 LDFSIDDVVRN--LTSANVIGTGSSGVVYR-VTIPNGETLAVK-----KMWSSDESGAFS 808
LD + DDV+ VIG G VV R + G+ AVK K SS G +
Sbjct: 13 LDMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSS--PGLST 70
Query: 809 SEIQTLGSI----RHKNIVRLLGWGSNKNLKLLFYDYLPNGSLS-SLLHGAGKGGADWEA 863
+++ SI +H +IV LL S+ + + ++++ L ++ A G EA
Sbjct: 71 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEA 130
Query: 864 -RYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQA---YLADFGLARIVSGSG 919
+ + AL Y H + I+H DVK VLL + L FG+A + SG
Sbjct: 131 VASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG 187
Query: 920 DDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
+ G+ +MAPE + + DV+ GV+L +L+G P
Sbjct: 188 LVAGGRV-------GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 97/215 (45%), Gaps = 29/215 (13%)
Query: 772 NVIGTGSSGVV----YRVTIPNGETLAVKKMWSSDE----SGAFSSEIQTLGSIRHKNIV 823
IG G+ GVV R+T G+ +A+KK+ ++ + + E++ L +H NI+
Sbjct: 61 ETIGNGAYGVVSSARRRLT---GQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNII 117
Query: 824 RL-------LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALA 876
+ + +G K++ ++ L L ++H + + RY + + L
Sbjct: 118 AIKDILRPTVPYGEFKSVYVVLD--LMESDLHQIIHSSQPLTLE-HVRY-FLYQLLRGLK 173
Query: 877 YLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSY 936
Y+H ++H D+K N+L+ + + DFG+AR + S ++ + +
Sbjct: 174 YMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMT---EYVATR 227
Query: 937 GYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGRH 970
Y APE S+ T+ D++S G + E+L R
Sbjct: 228 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 17/167 (10%)
Query: 810 EIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVL 869
E+ L + H NI+ L N+ +L + + G L L A K E +
Sbjct: 65 EVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFIK 122
Query: 870 GVAHALAYLHHDCMPPILHGDVKAMNVLL----GPGYQAYLADFGLARIVSGSGDDNCSK 925
+ + YLH I H D+K N++L P L DFGLA + +D
Sbjct: 123 QILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI----EDGVEF 175
Query: 926 TNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
N + G+ ++APE + + + ++D++S GV+ +L+G P
Sbjct: 176 KN----IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 100/238 (42%), Gaps = 33/238 (13%)
Query: 764 VVRNLTSANVIGTGSSGVV---YRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGS 816
V++ + IG+G+ G+V Y + +A+KK+ ++ + E+ +
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKC 80
Query: 817 IRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR----YEVVLGV 871
+ HKNI+ LL + K+L+ Y+ + + L + D E Y+++ G+
Sbjct: 81 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 140
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQ 931
H LH I+H D+K N+++ + DFGLAR S P
Sbjct: 141 KH----LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-------FMMTPY 186
Query: 932 LAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLM 989
+ Y Y APE E D++S G ++ E++ G PG + QW ++
Sbjct: 187 VVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG----GVLFPGTDHIDQWNKVI 239
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 91/213 (42%), Gaps = 23/213 (10%)
Query: 772 NVIGTGSSGVVYRVT-IPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
+GTGS G V V + G A+K K+ E +E + L ++ +V+L
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKL 106
Query: 826 -LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
+ N NL ++ +Y P G + S L G+ ++ AR+ + YLH
Sbjct: 107 EFSFKDNSNLYMVM-EYAPGGEMFSHLRRIGRF-SEPHARF-YAAQIVLTFEYLHS---L 160
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+++ D+K N+++ + DFGLA+ V G C G+ Y+APE
Sbjct: 161 DLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLC----------GTPEYLAPEII 210
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
+ + D ++ GV++ E+ G P P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 94/225 (41%), Gaps = 26/225 (11%)
Query: 753 LYQKLDFSIDDVVRNLTSANVIGTGSSGVVYR-VTIPNGETLAVKKMWSSDESGAFSSEI 811
YQ D + D +G GS + + V + + AVK + E+ EI
Sbjct: 6 FYQHYDLDLKD--------KPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANT-QKEI 56
Query: 812 QTLGSIR-HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLG 870
L H NIV+L ++ L + L G L + K ++ EA Y ++
Sbjct: 57 TALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERI-KKKKHFSETEASY-IMRK 114
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLL---GPGYQAYLADFGLARIVSGSGDDNCSKTN 927
+ A++++H ++H D+K N+L + + DFG AR+ D+ KT
Sbjct: 115 LVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL--KPPDNQPLKTP 169
Query: 928 QRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
+ Y APE + E D++S GV+L +L+G+ P
Sbjct: 170 -----CFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPF 209
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 43.1 bits (100), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 100/238 (42%), Gaps = 33/238 (13%)
Query: 764 VVRNLTSANVIGTGSSGVV---YRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGS 816
V++ + IG+G+ G+V Y + +A+KK+ ++ + E+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKC 79
Query: 817 IRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR----YEVVLGV 871
+ HKNI+ LL + K+L+ Y+ + + L + D E Y+++ G+
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQ 931
H LH I+H D+K N+++ + DFGLAR S P
Sbjct: 140 KH----LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-------FMMTPY 185
Query: 932 LAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLM 989
+ Y Y APE E D++S G ++ E++ G PG + QW ++
Sbjct: 186 VVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG----GVLFPGTDHIDQWNKVI 238
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 43.1 bits (100), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 78/200 (39%), Gaps = 17/200 (8%)
Query: 773 VIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNK 832
++ ++G Y + I E + K DE +E + L + RH + L +
Sbjct: 23 LVREKATGRYYAMKILRKEVIIAK-----DEVAHTVTESRVLQNTRHP-FLTALKYAFQT 76
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ +L F NG + + AR+ + AL YLH +++ D+K
Sbjct: 77 HDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLHS---RDVVYRDIK 132
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
N++L + DFGL + G D K G+ Y+APE
Sbjct: 133 LENLMLDKDGHIKITDFGLCK--EGISDGATMKX-----FCGTPEYLAPEVLEDNDYGRA 185
Query: 953 SDVYSFGVVLLEVLTGRHPL 972
D + GVV+ E++ GR P
Sbjct: 186 VDWWGLGVVMYEMMCGRLPF 205
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 886 ILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHAS 945
I++ D+K NV+L +ADFG+ + +N G+ Y+APE +
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCK-------ENIWDGVTTKXFCGTPDYIAPEIIA 515
Query: 946 MQRITEKSDVYSFGVVLLEVLTGRHPLD 973
Q + D ++FGV+L E+L G+ P +
Sbjct: 516 YQPYGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 91/213 (42%), Gaps = 23/213 (10%)
Query: 772 NVIGTGSSGVVYRVT-IPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
+GTGS G V V + G A+K K+ E +E + L ++ +V+L
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKL 106
Query: 826 -LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
+ N NL ++ +Y P G + S L G+ ++ AR+ + YLH
Sbjct: 107 EFSFKDNSNLYMVM-EYAPGGEMFSHLRRIGRF-SEPHARF-YAAQIVLTFEYLHS---L 160
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+++ D+K N+++ + DFGLA+ V G C G+ Y+APE
Sbjct: 161 DLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLC----------GTPEYLAPEII 210
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
+ + D ++ GV++ E+ G P P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 97/214 (45%), Gaps = 29/214 (13%)
Query: 772 NVIGTGSSGVV----YRVTIPNGETLAVKKMWSSDE----SGAFSSEIQTLGSIRHKNIV 823
IG G+ GVV R+T G+ +A+KK+ ++ + + E++ L +H NI+
Sbjct: 60 ETIGNGAYGVVSSARRRLT---GQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNII 116
Query: 824 RL-------LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALA 876
+ + +G K++ ++ L L ++H + + RY + + L
Sbjct: 117 AIKDILRPTVPYGEFKSVYVVLD--LMESDLHQIIHSSQPLTLE-HVRY-FLYQLLRGLK 172
Query: 877 YLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSY 936
Y+H ++H D+K N+L+ + + DFG+AR + S ++ + +
Sbjct: 173 YMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMT---EYVATR 226
Query: 937 GYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
Y APE S+ T+ D++S G + E+L R
Sbjct: 227 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 260
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 78/200 (39%), Gaps = 17/200 (8%)
Query: 773 VIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNK 832
++ ++G Y + I E + K DE +E + L + RH + L +
Sbjct: 28 LVREKATGRYYAMKILRKEVIIAK-----DEVAHTVTESRVLQNTRHP-FLTALKYAFQT 81
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ +L F NG + + AR+ + AL YLH +++ D+K
Sbjct: 82 HDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLHS---RDVVYRDIK 137
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
N++L + DFGL + G D K G+ Y+APE
Sbjct: 138 LENLMLDKDGHIKITDFGLCK--EGISDGATMKX-----FCGTPEYLAPEVLEDNDYGRA 190
Query: 953 SDVYSFGVVLLEVLTGRHPL 972
D + GVV+ E++ GR P
Sbjct: 191 VDWWGLGVVMYEMMCGRLPF 210
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 886 ILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHAS 945
I++ D+K NV+L +ADFG+ + +N G+ Y+APE +
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCK-------ENIWDGVTTKXFCGTPDYIAPEIIA 194
Query: 946 MQRITEKSDVYSFGVVLLEVLTGRHPLD 973
Q + D ++FGV+L E+L G+ P +
Sbjct: 195 YQPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 81/200 (40%), Gaps = 16/200 (8%)
Query: 773 VIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNK 832
++ ++G Y + I E + K DE +E + L + RH + L +
Sbjct: 169 LVKEKATGRYYAMKILKKEVIVAK-----DEVAHTLTENRVLQNSRHP-FLTALKYSFQT 222
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ +L F NG + ++ AR+ + AL YLH + +++ D+K
Sbjct: 223 HDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLHSE--KNVVYRDLK 279
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
N++L + DFGL + G D KT G+ Y+APE
Sbjct: 280 LENLMLDKDGHIKITDFGLCK--EGIKDGATMKT-----FCGTPEYLAPEVLEDNDYGRA 332
Query: 953 SDVYSFGVVLLEVLTGRHPL 972
D + GVV+ E++ GR P
Sbjct: 333 VDWWGLGVVMYEMMCGRLPF 352
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 101/238 (42%), Gaps = 33/238 (13%)
Query: 764 VVRNLTSANVIGTGSSGVV---YRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGS 816
V++ + IG+G+ G+V Y + +A+KK+ ++ + E+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKV 79
Query: 817 IRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR----YEVVLGV 871
+ HKNI+ LL + K+L+ Y+ + + L + D E Y++++G+
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGI 139
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQ 931
H LH I+H D+K N+++ + DFGLAR S P
Sbjct: 140 KH----LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTS-------FMMTPY 185
Query: 932 LAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLM 989
+ Y Y APE E D++S G ++ E++ G PG + QW ++
Sbjct: 186 VVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG----GVLFPGTDHIDQWNKVI 238
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 87/219 (39%), Gaps = 22/219 (10%)
Query: 761 IDDVVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHK 820
IDD ++ V+G G +G V ++ + KM E+ S +
Sbjct: 20 IDDYK---VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-QCP 75
Query: 821 NIVRLLGWGSN----KNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALA 876
+IVR++ N + L+ + L G L S + G E++ + A+
Sbjct: 76 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 135
Query: 877 YLHHDCMPPILHGDVKAMNVLLG---PGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
YLH I H DVK N+L P L DFG A+ + ++ + P
Sbjct: 136 YLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPY-- 188
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
Y+APE ++ + D++S GV++ +L G P
Sbjct: 189 ----YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 223
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 101/238 (42%), Gaps = 33/238 (13%)
Query: 764 VVRNLTSANVIGTGSSGVV---YRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGS 816
V++ + IG+G+ G+V Y + +A+KK+ ++ + E+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKC 79
Query: 817 IRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR----YEVVLGV 871
+ HKNI+ LL + K+L+ Y+ + + L + D E Y+++ G+
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQ 931
H LH I+H D+K N+++ + DFGLAR S P+
Sbjct: 140 KH----LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-------FMMEPE 185
Query: 932 LAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLM 989
+ Y Y APE E D++S G ++ E++ + PG + QW ++
Sbjct: 186 VVTRY-YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK----ILFPGRDYIDQWNKVI 238
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 100/238 (42%), Gaps = 33/238 (13%)
Query: 764 VVRNLTSANVIGTGSSGVV---YRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGS 816
V++ + IG+G+ G+V Y + +A+KK+ ++ + E+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKC 79
Query: 817 IRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR----YEVVLGV 871
+ HKNI+ LL + K+L+ Y+ + + L + D E Y+++ G+
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGI 139
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQ 931
H LH I+H D+K N+++ + DFGLAR S P
Sbjct: 140 KH----LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-------FMMTPY 185
Query: 932 LAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLM 989
+ Y Y APE E D++S G ++ E++ G PG + QW ++
Sbjct: 186 VVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG----GVLFPGTDHIDQWNKVI 238
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 87/232 (37%), Gaps = 34/232 (14%)
Query: 755 QKLDFSIDDVVRN--LTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQ 812
Q+ DF I V+ + V+ +G VY + I N M E F E
Sbjct: 59 QRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNK-----WDMLKRGEVSCFREERD 113
Query: 813 TLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARY---EVVL 869
L + + I +L ++N L +Y G L +LL G+ AR+ E+V+
Sbjct: 114 VLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVM 173
Query: 870 GV--AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927
+ H L Y+H D +K N+LL LADFG + G T
Sbjct: 174 AIDSVHRLGYVHRD---------IKPDNILLDRCGHIRLADFGSCLKLRADG------TV 218
Query: 928 QRPQLAGSYGYMAPE-------HASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
+ G+ Y++PE + D ++ GV E+ G+ P
Sbjct: 219 RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF 270
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 82/211 (38%), Gaps = 23/211 (10%)
Query: 772 NVIGTGSSGVVYRVTIPNGETL----AVKKMWSSDESGAFSSEIQTLGSI-----RHKNI 822
VIG GS V V + + + VKK +D+ +QT + H +
Sbjct: 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDI--DWVQTEKHVFEQASNHPFL 72
Query: 823 VRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDC 882
V L ++ +Y+ G L + K + Y + +A L YLH
Sbjct: 73 VGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLHERG 130
Query: 883 MPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPE 942
I++ D+K NVLL L D+G+ + GD G+ Y+APE
Sbjct: 131 ---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSX-------FCGTPNYIAPE 180
Query: 943 HASMQRITEKSDVYSFGVVLLEVLTGRHPLD 973
+ D ++ GV++ E++ GR P D
Sbjct: 181 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 82/211 (38%), Gaps = 23/211 (10%)
Query: 772 NVIGTGSSGVVYRVTIPNGETL----AVKKMWSSDESGAFSSEIQTLGSI-----RHKNI 822
VIG GS V V + + + VKK +D+ +QT + H +
Sbjct: 11 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDI--DWVQTEKHVFEQASNHPFL 68
Query: 823 VRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDC 882
V L ++ +Y+ G L + K + Y + +A L YLH
Sbjct: 69 VGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLHERG 126
Query: 883 MPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPE 942
I++ D+K NVLL L D+G+ + GD G+ Y+APE
Sbjct: 127 ---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSX-------FCGTPNYIAPE 176
Query: 943 HASMQRITEKSDVYSFGVVLLEVLTGRHPLD 973
+ D ++ GV++ E++ GR P D
Sbjct: 177 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 82/211 (38%), Gaps = 23/211 (10%)
Query: 772 NVIGTGSSGVVYRVTIPNGETL----AVKKMWSSDESGAFSSEIQTLGSI-----RHKNI 822
VIG GS V V + + + VKK +D+ +QT + H +
Sbjct: 26 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDI--DWVQTEKHVFEQASNHPFL 83
Query: 823 VRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDC 882
V L ++ +Y+ G L + K + Y + +A L YLH
Sbjct: 84 VGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLHERG 141
Query: 883 MPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPE 942
I++ D+K NVLL L D+G+ + GD G+ Y+APE
Sbjct: 142 ---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSX-------FCGTPNYIAPE 191
Query: 943 HASMQRITEKSDVYSFGVVLLEVLTGRHPLD 973
+ D ++ GV++ E++ GR P D
Sbjct: 192 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 81/200 (40%), Gaps = 16/200 (8%)
Query: 773 VIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNK 832
++ ++G Y + I E + K DE +E + L + RH + L +
Sbjct: 166 LVKEKATGRYYAMKILKKEVIVAK-----DEVAHTLTENRVLQNSRHP-FLTALKYSFQT 219
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ +L F NG + ++ AR+ + AL YLH + +++ D+K
Sbjct: 220 HDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLHSE--KNVVYRDLK 276
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
N++L + DFGL + G D KT G+ Y+APE
Sbjct: 277 LENLMLDKDGHIKITDFGLCK--EGIKDGATMKT-----FCGTPEYLAPEVLEDNDYGRA 329
Query: 953 SDVYSFGVVLLEVLTGRHPL 972
D + GVV+ E++ GR P
Sbjct: 330 VDWWGLGVVMYEMMCGRLPF 349
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 87/219 (39%), Gaps = 22/219 (10%)
Query: 761 IDDVVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHK 820
IDD ++ V+G G +G V ++ + KM E+ S +
Sbjct: 22 IDDYK---VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-QCP 77
Query: 821 NIVRLLGWGSN----KNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALA 876
+IVR++ N + L+ + L G L S + G E++ + A+
Sbjct: 78 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 137
Query: 877 YLHHDCMPPILHGDVKAMNVLLG---PGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
YLH I H DVK N+L P L DFG A+ + ++ + P
Sbjct: 138 YLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPY-- 190
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
Y+APE ++ + D++S GV++ +L G P
Sbjct: 191 ----YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 225
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 100/238 (42%), Gaps = 33/238 (13%)
Query: 764 VVRNLTSANVIGTGSSGVV---YRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGS 816
V++ + IG+G+ G+V Y + +A+KK+ ++ + E+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKC 79
Query: 817 IRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR----YEVVLGV 871
+ HKNI+ LL + K+L+ Y+ + + L + D E Y+++ G+
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQ 931
H LH I+H D+K N+++ + DFGLAR S P
Sbjct: 140 KH----LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-------FMMTPY 185
Query: 932 LAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLM 989
+ Y Y APE E D++S G ++ E++ G PG + QW ++
Sbjct: 186 VVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG----GVLFPGTDHIDQWNKVI 238
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 100/238 (42%), Gaps = 33/238 (13%)
Query: 764 VVRNLTSANVIGTGSSGVV---YRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGS 816
V++ + IG+G+ G+V Y + +A+KK+ ++ + E+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKC 79
Query: 817 IRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR----YEVVLGV 871
+ HKNI+ LL + K+L+ Y+ + + L + D E Y+++ G+
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGI 139
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQ 931
H LH I+H D+K N+++ + DFGLAR S P
Sbjct: 140 KH----LHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS-------FMMTPY 185
Query: 932 LAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLM 989
+ Y Y APE E D++S G ++ E++ G PG + QW ++
Sbjct: 186 VVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG----GVLFPGTDHIDQWNKVI 238
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 87/219 (39%), Gaps = 22/219 (10%)
Query: 761 IDDVVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHK 820
IDD ++ V+G G +G V ++ + KM E+ S +
Sbjct: 15 IDDYK---VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-QCP 70
Query: 821 NIVRLLGWGSN----KNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALA 876
+IVR++ N + L+ + L G L S + G E++ + A+
Sbjct: 71 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 130
Query: 877 YLHHDCMPPILHGDVKAMNVLLG---PGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
YLH I H DVK N+L P L DFG A+ + ++ + P
Sbjct: 131 YLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPY-- 183
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
Y+APE ++ + D++S GV++ +L G P
Sbjct: 184 ----YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 218
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 78/200 (39%), Gaps = 17/200 (8%)
Query: 773 VIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNK 832
++ ++G Y + I E + K DE +E + L + RH + L +
Sbjct: 23 LVREKATGRYYAMKILRKEVIIAK-----DEVAHTVTESRVLQNTRHP-FLTALKYAFQT 76
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ +L F NG + + AR+ + AL YLH +++ D+K
Sbjct: 77 HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA-EIVSALEYLHS---RDVVYRDIK 132
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
N++L + DFGL + G D K G+ Y+APE
Sbjct: 133 LENLMLDKDGHIKITDFGLCK--EGISDGATMKX-----FCGTPEYLAPEVLEDNDYGRA 185
Query: 953 SDVYSFGVVLLEVLTGRHPL 972
D + GVV+ E++ GR P
Sbjct: 186 VDWWGLGVVMYEMMCGRLPF 205
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 78/200 (39%), Gaps = 17/200 (8%)
Query: 773 VIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNK 832
++ ++G Y + I E + K DE +E + L + RH + L +
Sbjct: 23 LVREKATGRYYAMKILRKEVIIAK-----DEVAHTVTESRVLQNTRHP-FLTALKYAFQT 76
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ +L F NG + + AR+ + AL YLH +++ D+K
Sbjct: 77 HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA-EIVSALEYLHS---RDVVYRDIK 132
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
N++L + DFGL + G D K G+ Y+APE
Sbjct: 133 LENLMLDKDGHIKITDFGLCK--EGISDGATMKX-----FCGTPEYLAPEVLEDNDYGRA 185
Query: 953 SDVYSFGVVLLEVLTGRHPL 972
D + GVV+ E++ GR P
Sbjct: 186 VDWWGLGVVMYEMMCGRLPF 205
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 23/213 (10%)
Query: 772 NVIGTGSSGVVYRVT-IPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
+GTGS G V V + G A+K K+ + +E + L ++ +V+L
Sbjct: 33 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 92
Query: 826 -LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
+ N NL ++ +Y+P G + S L G+ ++ AR+ + YLH
Sbjct: 93 EFSFKDNSNLYMVM-EYVPGGEMFSHLRRIGRF-SEPHARF-YAAQIVLTFEYLHS---L 146
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+++ D+K N+L+ + DFG A+ V G C G+ Y+APE
Sbjct: 147 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC----------GTPEYLAPEII 196
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
+ + D ++ GV++ E+ G P P
Sbjct: 197 LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 229
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 87/219 (39%), Gaps = 22/219 (10%)
Query: 761 IDDVVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHK 820
IDD ++ V+G G +G V ++ + KM E+ S +
Sbjct: 14 IDDYK---VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-QCP 69
Query: 821 NIVRLLGWGSN----KNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALA 876
+IVR++ N + L+ + L G L S + G E++ + A+
Sbjct: 70 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 129
Query: 877 YLHHDCMPPILHGDVKAMNVLLG---PGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
YLH I H DVK N+L P L DFG A+ + ++ + P
Sbjct: 130 YLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPY-- 182
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
Y+APE ++ + D++S GV++ +L G P
Sbjct: 183 ----YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 23/213 (10%)
Query: 772 NVIGTGSSGVVYRVT-IPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
+GTGS G V V + G A+K K+ + +E + L ++ +V+L
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 826 -LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
+ N NL ++ +Y+P G + S L G+ ++ AR+ + YLH
Sbjct: 108 EFSFKDNSNLYMVM-EYVPGGEMFSHLRRIGRF-SEPHARF-YAAQIVLTFEYLHS---L 161
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+++ D+K N+L+ + DFG A+ V G C G+ Y+APE
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC----------GTPEYLAPEII 211
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
+ + D ++ GV++ E+ G P P
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 23/213 (10%)
Query: 772 NVIGTGSSGVVYRVT-IPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
+GTGS G V V + G A+K K+ + +E + L ++ +V+L
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 826 -LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
+ N NL ++ +Y+P G + S L G+ ++ AR+ + YLH
Sbjct: 107 EFSFKDNSNLYMVM-EYVPGGEMFSHLRRIGRF-SEPHARF-YAAQIVLTFEYLHS---L 160
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+++ D+K N+L+ + DFG A+ V G C G+ Y+APE
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----------GTPEYLAPEII 210
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
+ + D ++ GV++ E+ G P P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 85/219 (38%), Gaps = 22/219 (10%)
Query: 761 IDDVVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHK 820
IDD ++ V+G G +G V ++ + KM E+ S +
Sbjct: 60 IDDYK---VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-QCP 115
Query: 821 NIVRLLGWGSN----KNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALA 876
+IVR++ N + L+ + L G L S + G E++ + A+
Sbjct: 116 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 175
Query: 877 YLHHDCMPPILHGDVKAMNVLL---GPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
YLH I H DVK N+L P L DFG A+ + N
Sbjct: 176 YLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH--------NSLTTPC 224
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
+ Y+APE ++ + D++S GV++ +L G P
Sbjct: 225 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 14/108 (12%)
Query: 867 VVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKT 926
+ + +A A+ +LH + +H D+K N+ + DFGL V+ D +T
Sbjct: 169 IFIQIAEAVEFLHSKGL---MHRDLKPSNIFFTMDDVVKVGDFGL---VTAMDQDEEEQT 222
Query: 927 NQRPQLA--------GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVL 966
P A G+ YM+PE + K D++S G++L E+L
Sbjct: 223 VLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 23/213 (10%)
Query: 772 NVIGTGSSGVVYRVT-IPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
+GTGS G V V + G A+K K+ + +E + L ++ +V+L
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 826 -LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
+ N NL ++ +Y+P G + S L G+ ++ AR+ + YLH
Sbjct: 108 EFSFKDNSNLYMVM-EYVPGGEMFSHLRRIGRF-SEPHARF-YAAQIVLTFEYLHS---L 161
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+++ D+K N+L+ + DFG A+ V G C G+ Y+APE
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----------GTPEYLAPEII 211
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
+ + D ++ GV++ E+ G P P
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 7 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + FGLAR DD
Sbjct: 127 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILGFGLAR----HTDDE 178
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 179 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 23/213 (10%)
Query: 772 NVIGTGSSGVVYRVT-IPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
+GTGS G V V + G A+K K+ + +E + L ++ +V+L
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 826 -LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
+ N NL ++ +Y+P G + S L G+ ++ AR+ + YLH
Sbjct: 107 EFSFKDNSNLYMVM-EYVPGGEMFSHLRRIGRF-SEPHARF-YAAQIVLTFEYLHS---L 160
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+++ D+K N+L+ + DFG A+ V G C G+ Y+APE
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----------GTPEYLAPEII 210
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
+ + D ++ GV++ E+ G P P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 23/213 (10%)
Query: 772 NVIGTGSSGVVYRVT-IPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
+GTGS G V V + G A+K K+ + +E + L ++ +V+L
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 826 -LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
+ N NL ++ +Y+P G + S L G+ ++ AR+ + YLH
Sbjct: 107 EFSFKDNSNLYMVM-EYVPGGEMFSHLRRIGRF-SEPHARF-YAAQIVLTFEYLHS---L 160
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+++ D+K N+L+ + DFG A+ V G C G+ Y+APE
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----------GTPEYLAPEII 210
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
+ + D ++ GV++ E+ G P P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 87/219 (39%), Gaps = 22/219 (10%)
Query: 761 IDDVVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHK 820
IDD ++ V+G G +G V ++ + KM E+ S +
Sbjct: 30 IDDYK---VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-QCP 85
Query: 821 NIVRLLGWGSN----KNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALA 876
+IVR++ N + L+ + L G L S + G E++ + A+
Sbjct: 86 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 145
Query: 877 YLHHDCMPPILHGDVKAMNVLLG---PGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
YLH I H DVK N+L P L DFG A+ + ++ + P
Sbjct: 146 YLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPY-- 198
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
Y+APE ++ + D++S GV++ +L G P
Sbjct: 199 ----YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 233
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 7 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + D GLAR DD
Sbjct: 127 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLAR----HTDDE 178
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 179 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 7 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + D GLAR DD
Sbjct: 127 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLAR----HTDDE 178
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 179 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 85/219 (38%), Gaps = 22/219 (10%)
Query: 761 IDDVVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHK 820
IDD ++ V+G G +G V ++ + KM E+ S +
Sbjct: 66 IDDYK---VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-QCP 121
Query: 821 NIVRLLGWGSN----KNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALA 876
+IVR++ N + L+ + L G L S + G E++ + A+
Sbjct: 122 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 181
Query: 877 YLHHDCMPPILHGDVKAMNVLLG---PGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
YLH I H DVK N+L P L DFG A+ + N
Sbjct: 182 YLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--------ETTSHNSLTTPC 230
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
+ Y+APE ++ + D++S GV++ +L G P
Sbjct: 231 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 269
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 100/238 (42%), Gaps = 33/238 (13%)
Query: 764 VVRNLTSANVIGTGSSGVV---YRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGS 816
V++ + IG+G+ G+V Y + +A+KK+ ++ + E+ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKV 79
Query: 817 IRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR----YEVVLGV 871
+ HKNI+ LL + K+L+ Y+ + + L + D E Y+++ G+
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGI 139
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQ 931
H LH I+H D+K N+++ + DFGLAR S P
Sbjct: 140 KH----LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTS-------FMMTPY 185
Query: 932 LAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLM 989
+ Y Y APE E D++S G ++ E++ G PG + QW ++
Sbjct: 186 VVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG----GVLFPGTDHIDQWNKVI 238
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 23/213 (10%)
Query: 772 NVIGTGSSGVVYRVT-IPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
+GTGS G V V + G A+K K+ + +E + L ++ +V+L
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 826 -LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
+ N NL ++ +Y+P G + S L G+ AR+ + YLH
Sbjct: 108 EFSFKDNSNLYMVM-EYVPGGEMFSHLRRIGRFXEP-HARF-YAAQIVLTFEYLHS---L 161
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+++ D+K N+L+ + DFG A+ V G C G+ Y+APE
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----------GTPEYLAPEII 211
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
+ + D ++ GV++ E+ G P P
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 10/102 (9%)
Query: 871 VAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930
+ AL YLH +++ D+K N++L + DFGL + G D KT
Sbjct: 114 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKT---- 164
Query: 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
G+ Y+APE D + GVV+ E++ GR P
Sbjct: 165 -FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 24/209 (11%)
Query: 773 VIGTGSSGVVY----RVTIPNGETLAVKKMWSSD-ESGAFSSEIQTLGSIRHKNIVRLLG 827
++G GS G V R+T + K + + ++ E++ L + H NI++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887
+ + + + G L + + AR ++ V + Y+H I+
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR--IIKQVFSGITYMHK---HNIV 143
Query: 888 HGDVKAMNVLLGPGYQ---AYLADFGLARIVSGSGDDNCSKTNQR-PQLAGSYGYMAPEH 943
H D+K N+LL + + DFGL+ C + N + G+ Y+APE
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLS---------TCFQQNTKMKDRIGTAYYIAPE- 193
Query: 944 ASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
EK DV+S GV+L +L+G P
Sbjct: 194 VLRGTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 23/213 (10%)
Query: 772 NVIGTGSSGVVYRVT-IPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
+GTGS G V V + G A+K K+ + +E + L ++ +V+L
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 826 -LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
+ N NL ++ +Y+P G + S L G+ AR+ + YLH
Sbjct: 107 EFSFKDNSNLYMVM-EYVPGGEMFSHLRRIGRFXEP-HARF-YAAQIVLTFEYLHS---L 160
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+++ D+K N+L+ + DFG A+ V G C G+ Y+APE
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----------GTPEYLAPEII 210
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
+ + D ++ GV++ E+ G P P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 87/219 (39%), Gaps = 22/219 (10%)
Query: 761 IDDVVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHK 820
IDD ++ V+G G +G V ++ + KM E+ S +
Sbjct: 16 IDDYK---VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-QCP 71
Query: 821 NIVRLLGWGSN----KNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALA 876
+IVR++ N + L+ + L G L S + G E++ + A+
Sbjct: 72 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 131
Query: 877 YLHHDCMPPILHGDVKAMNVLLG---PGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
YLH I H DVK N+L P L DFG A+ + ++ + P
Sbjct: 132 YLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPY-- 184
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
Y+APE ++ + D++S GV++ +L G P
Sbjct: 185 ----YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 23/213 (10%)
Query: 772 NVIGTGSSGVVYRVT-IPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
+GTGS G V V + G A+K K+ + +E + L ++ +V+L
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 826 -LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
+ N NL ++ +Y+P G + S L G+ AR+ + YLH
Sbjct: 107 EFSFKDNSNLYMVM-EYVPGGEMFSHLRRIGRFXEP-HARF-YAAQIVLTFEYLHS---L 160
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+++ D+K N+L+ + DFG A+ V G C G+ Y+APE
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----------GTPEYLAPEII 210
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
+ + D ++ GV++ E+ G P P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 100/238 (42%), Gaps = 33/238 (13%)
Query: 764 VVRNLTSANVIGTGSSGVV---YRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGS 816
V++ + IG+G+ G+V Y + +A+KK+ ++ + E+ +
Sbjct: 24 VLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKC 81
Query: 817 IRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR----YEVVLGV 871
+ HKNI+ LL + K+L+ Y+ + + L + D E Y+++ G+
Sbjct: 82 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 141
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQ 931
H LH I+H D+K N+++ + DFGLAR S P
Sbjct: 142 KH----LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-------FMMVPF 187
Query: 932 LAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLM 989
+ Y Y APE E D++S G ++ E++ G PG + QW ++
Sbjct: 188 VVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG----GVLFPGTDHIDQWNKVI 240
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 14/109 (12%)
Query: 867 VVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGY---QAYLADFGLARIVSGSGDDNC 923
++ + + YLH + I+H D+K N+LL Y + DFG++R + + C
Sbjct: 136 LIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA----C 188
Query: 924 SKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
+ ++ G+ Y+APE + IT +D+++ G++ +LT P
Sbjct: 189 ----ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPF 233
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 27/215 (12%)
Query: 772 NVIGTGSSGVVYRVTIPNGET--------LAVKKMWSSDESGAFSSEIQTLGSIRHKNIV 823
+GTGS G V + + + ET L +K+ + +E + L ++ +V
Sbjct: 40 KTLGTGSFGRV--MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 97
Query: 824 RL-LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDC 882
+L + N NL ++ +Y+P G + S L G+ ++ AR+ + YLH
Sbjct: 98 KLEFSFKDNSNLYMVM-EYVPGGEMFSHLRRIGRF-SEPHARF-YAAQIVLTFEYLHS-- 152
Query: 883 MPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPE 942
+++ D+K N+L+ + DFG A+ V G C G+ Y+APE
Sbjct: 153 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----------GTPEYLAPE 201
Query: 943 HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
+ + D ++ GV++ E+ G P P
Sbjct: 202 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 102/253 (40%), Gaps = 46/253 (18%)
Query: 735 RTRMANNSFTADDTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYR-VTIPNGETL 793
R MA++ +D +E+ VIG G VV R + G+
Sbjct: 14 RGSMADDDVLFEDVYEL-------------------CEVIGKGPFSVVRRCINRETGQQF 54
Query: 794 AVK-----KMWSSDESGAFSSEIQTLGSI----RHKNIVRLLGWGSNKNLKLLFYDYLPN 844
AVK K SS G + +++ SI +H +IV LL S+ + + ++++
Sbjct: 55 AVKIVDVAKFTSS--PGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDG 112
Query: 845 GSLS-SLLHGAGKGGADWEA-RYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGY 902
L ++ A G EA + + AL Y H + I+H DVK VLL
Sbjct: 113 ADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKE 169
Query: 903 QA---YLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFG 959
+ L FG+A + SG + G+ +MAPE + + DV+ G
Sbjct: 170 NSAPVKLGGFGVAIQLGESGLVAGGRV-------GTPHFMAPEVVKREPYGKPVDVWGCG 222
Query: 960 VVLLEVLTGRHPL 972
V+L +L+G P
Sbjct: 223 VILFILLSGCLPF 235
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 752 TLY-QKLDFSIDDVVRNLTSANVIGTGSSG-VVYRVTIPNGETLAVKKMWSSDESGAFSS 809
T Y Q+L+ +I +V + + +G+G+ G V G +AVKK+ +S +
Sbjct: 7 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 810 ----EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGG--ADWE 862
E++ L ++H+N++ LL + ++L+ YL + + L+ K D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 863 ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922
++ ++ + L Y+H I+H D+K N+ + + + D GLAR DD
Sbjct: 127 VQF-LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLAR----HTDDE 178
Query: 923 CSKTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ + Y APE + + D++S G ++ E+LTGR
Sbjct: 179 MTG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 29/201 (14%)
Query: 788 PNGETLAVKKM---WSSDESGAF-SSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLP 843
P GE + V+++ S+E F E+ H NIV N + ++
Sbjct: 34 PTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 93
Query: 844 NGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQ 903
GS L+ G + A ++ GV AL Y+HH +H VKA ++L+ +
Sbjct: 94 YGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGY---VHRSVKASHILISVDGK 150
Query: 904 AYLADF--GLARIVSGSGDDNCSKTNQRPQLAGSYG--------YMAPE--HASMQRITE 951
YL+ L+ I G QR ++ + +++PE ++Q
Sbjct: 151 VYLSGLRSNLSMISHG----------QRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDA 200
Query: 952 KSDVYSFGVVLLEVLTGRHPL 972
KSD+YS G+ E+ G P
Sbjct: 201 KSDIYSVGITACELANGHVPF 221
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 27/215 (12%)
Query: 772 NVIGTGSSGVVYRVTIPNGET--------LAVKKMWSSDESGAFSSEIQTLGSIRHKNIV 823
+GTGS G V + + + ET L +K+ + +E + L ++ +V
Sbjct: 48 KTLGTGSFGRV--MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 824 RL-LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDC 882
+L + N NL ++ +Y+P G + S L G+ ++ AR+ + YLH
Sbjct: 106 KLEFSFKDNSNLYMVM-EYVPGGEMFSHLRRIGRF-SEPHARF-YAAQIVLTFEYLHS-- 160
Query: 883 MPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPE 942
+++ D+K N+L+ + DFG A+ V G C G+ Y+APE
Sbjct: 161 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----------GTPEYLAPE 209
Query: 943 HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
+ + D ++ GV++ E+ G P P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%)
Query: 118 IPKEFGDYRELTFIDLSGNSLWGEIPTEVCRLRKLESLYLNTNLLEGEIPSDIGNLSSLA 177
+PKE +Y+ LT IDLS N + + +L +L L+ N L P L SL
Sbjct: 46 VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLR 105
Query: 178 YLTLYDNQLSGKIPKSIGALSKLQVFRAGGN 208
L+L+ N +S + LS L G N
Sbjct: 106 LLSLHGNDISVVPEGAFNDLSALSHLAIGAN 136
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%)
Query: 311 IPDELGSCTELTVVDFSDNLLTGSIPRSFGNLLKLQELQLSVNQLSGTIPIEIATCTALT 370
+P EL + LT++D S+N ++ +SF N+ +L L LS N+L P +L
Sbjct: 46 VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLR 105
Query: 371 HLEIDNNAIS 380
L + N IS
Sbjct: 106 LLSLHGNDIS 115
Score = 30.4 bits (67), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 24/70 (34%)
Query: 479 IPSEMGNLKHLNFVDMSENHL-----------------------VGGIPPSVV-GCQSLE 514
+P E+ N KHL +D+S N + + IPP G +SL
Sbjct: 46 VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLR 105
Query: 515 FLDLHSNGLT 524
L LH N ++
Sbjct: 106 LLSLHGNDIS 115
Score = 29.6 bits (65), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 11/115 (9%)
Query: 318 CTEL-TVVDFSDN---LLTGSIPRSFGNLLKLQELQLSVNQLSGTIPIEIATCTALTHLE 373
CT L TVV S+ +L IPR + EL L NQ + +P E++ LT ++
Sbjct: 8 CTCLDTVVRCSNKGLKVLPKGIPRD------VTELYLDGNQFT-LVPKELSNYKHLTLID 60
Query: 374 IDNNAISGEIPADIGNINGLTLFFAWKNKLTGNIPESLSQCQELQALDFSYNNLS 428
+ NN IS N+ L N+L P + + L+ L N++S
Sbjct: 61 LSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDIS 115
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 90/213 (42%), Gaps = 23/213 (10%)
Query: 772 NVIGTGSSGVVYRVTIPN-GETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
+GTGS G V V G A+K K+ + +E + L ++ +V+L
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 826 -LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
+ N NL ++ +Y+P G + S L G+ ++ AR+ + YLH
Sbjct: 107 EYSFKDNSNLYMVM-EYVPGGEMFSHLRRIGRF-SEPHARF-YAAQIVLTFEYLHS---L 160
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+++ D+K N+L+ + DFG A+ V G C G+ Y+APE
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----------GTPEYLAPEII 210
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
+ + D ++ GV++ E+ G P P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 27/215 (12%)
Query: 772 NVIGTGSSGVVYRVTIPNGET--------LAVKKMWSSDESGAFSSEIQTLGSIRHKNIV 823
+GTGS G V + + + ET L +K+ + +E + L ++ +V
Sbjct: 48 KTLGTGSFGRV--MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 824 RL-LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDC 882
+L + N NL ++ +Y+P G + S L G+ ++ AR+ + YLH
Sbjct: 106 KLEFSFKDNSNLYMVM-EYVPGGEMFSHLRRIGRF-SEPHARF-YAAQIVLTFEYLHS-- 160
Query: 883 MPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPE 942
+++ D+K N+L+ + DFG A+ V G C G+ Y+APE
Sbjct: 161 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----------GTPEYLAPE 209
Query: 943 HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
+ + D ++ GV++ E+ G P P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 90/213 (42%), Gaps = 23/213 (10%)
Query: 772 NVIGTGSSGVVYRVTIPN-GETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
+GTGS G V V G A+K K+ + +E + L ++ +V+L
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 826 -LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
+ N NL ++ +Y+P G + S L G+ ++ AR+ + YLH
Sbjct: 107 EYSFKDNSNLYMVM-EYVPGGEMFSHLRRIGRF-SEPHARF-YAAQIVLTFEYLHS---L 160
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+++ D+K N+L+ + DFG A+ V G C G+ Y+APE
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----------GTPEYLAPEII 210
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
+ + D ++ GV++ E+ G P P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 27/215 (12%)
Query: 772 NVIGTGSSGVVYRVTIPNGET--------LAVKKMWSSDESGAFSSEIQTLGSIRHKNIV 823
+GTGS G V + + + ET L +K+ + +E + L ++ +V
Sbjct: 48 KTLGTGSFGRV--MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 824 RL-LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDC 882
+L + N NL ++ +Y+P G + S L G+ ++ AR+ + YLH
Sbjct: 106 KLEFSFKDNSNLYMVM-EYVPGGEMFSHLRRIGRF-SEPHARF-YAAQIVLTFEYLHS-- 160
Query: 883 MPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPE 942
+++ D+K N+L+ + DFG A+ V G C G+ Y+APE
Sbjct: 161 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----------GTPEYLAPE 209
Query: 943 HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
+ + D ++ GV++ E+ G P P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 29/201 (14%)
Query: 788 PNGETLAVKKM---WSSDESGAF-SSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLP 843
P GE + V+++ S+E F E+ H NIV N + ++
Sbjct: 50 PTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 109
Query: 844 NGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQ 903
GS L+ G + A ++ GV AL Y+HH +H VKA ++L+ +
Sbjct: 110 YGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGY---VHRSVKASHILISVDGK 166
Query: 904 AYLADF--GLARIVSGSGDDNCSKTNQRPQLAGSYG--------YMAPE--HASMQRITE 951
YL+ L+ I G QR ++ + +++PE ++Q
Sbjct: 167 VYLSGLRSNLSMISHG----------QRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDA 216
Query: 952 KSDVYSFGVVLLEVLTGRHPL 972
KSD+YS G+ E+ G P
Sbjct: 217 KSDIYSVGITACELANGHVPF 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 90/213 (42%), Gaps = 23/213 (10%)
Query: 772 NVIGTGSSGVVYRVTIPN-GETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
+GTGS G V V G A+K K+ + +E + L ++ +V+L
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 826 -LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
+ N NL ++ +Y+P G + S L G+ ++ AR+ + YLH
Sbjct: 107 EYSFKDNSNLYMVM-EYVPGGEMFSHLRRIGRF-SEPHARF-YAAQIVLTFEYLHS---L 160
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+++ D+K N+L+ + DFG A+ V G C G+ Y+APE
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----------GTPEYLAPEII 210
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
+ + D ++ GV++ E+ G P P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 100/238 (42%), Gaps = 33/238 (13%)
Query: 764 VVRNLTSANVIGTGSSGVV---YRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGS 816
V++ + IG+G+ G+V Y + +A+KK+ ++ + E+ +
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKC 73
Query: 817 IRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR----YEVVLGV 871
+ HKNI+ LL + K+L+ Y+ + + L + D E Y+++ G+
Sbjct: 74 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 133
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQ 931
H LH I+H D+K N+++ + DFGLAR S P
Sbjct: 134 KH----LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-------FMMTPY 179
Query: 932 LAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLM 989
+ Y Y APE E D++S G ++ E++ + PG + QW ++
Sbjct: 180 VVTRY-YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK----ILFPGRDYIDQWNKVI 232
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 90/240 (37%), Gaps = 65/240 (27%)
Query: 772 NVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDES----GAFSSEIQTLGSIRHKNIVRLL 826
++IGTGS G V +A+KK+ E EI L + H ++V++L
Sbjct: 59 HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVL 118
Query: 827 GWG-----------------SNKNLKLLFYD--YLPNGSLSSLLHGAGKGGADWEARYEV 867
++ + K LF YL + +LL Y +
Sbjct: 119 DIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLL-------------YNL 165
Query: 868 VLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS--- 924
++GV Y+H ILH D+K N L+ + DFGLAR V + N
Sbjct: 166 LVGVK----YVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPI 218
Query: 925 --------------KTNQRPQLAG---SYGYMAPEHASMQR-ITEKSDVYSFGVVLLEVL 966
N + QL G + Y APE +Q TE DV+S G + E+L
Sbjct: 219 SPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 90/215 (41%), Gaps = 27/215 (12%)
Query: 772 NVIGTGSSGVVYRVTIPNGET--------LAVKKMWSSDESGAFSSEIQTLGSIRHKNIV 823
+GTGS G V + + + ET L +K+ + +E + L ++ +V
Sbjct: 40 KTLGTGSFGRV--MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 97
Query: 824 RL-LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDC 882
+L + N NL ++ +Y+P G + S L G+ AR+ + YLH
Sbjct: 98 KLEFSFKDNSNLYMVM-EYVPGGEMFSHLRRIGRFXEP-HARF-YAAQIVLTFEYLHS-- 152
Query: 883 MPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPE 942
+++ D+K N+L+ + DFG A+ V G C G+ Y+APE
Sbjct: 153 -LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----------GTPEYLAPE 201
Query: 943 HASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
+ + D ++ GV++ E+ G P P
Sbjct: 202 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 81/213 (38%), Gaps = 23/213 (10%)
Query: 772 NVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRL------ 825
+GTGS G V V K+ + TL R + V
Sbjct: 48 RTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKL 107
Query: 826 -LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
+ N NL ++ +Y P G + S L G+ ++ AR+ + YLH
Sbjct: 108 EFSFKDNSNLYMVL-EYAPGGEMFSHLRRIGRF-SEPHARF-YAAQIVLTFEYLHS---L 161
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+++ D+K N+L+ +ADFG A+ V G C G+ Y+APE
Sbjct: 162 DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC----------GTPEYLAPEII 211
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
+ + D ++ GV++ E+ G P P
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 100/238 (42%), Gaps = 33/238 (13%)
Query: 764 VVRNLTSANVIGTGSSGVV---YRVTIPNGETLAVKKMWSSDESGAFSS----EIQTLGS 816
V++ + IG+G+ G+V Y + +A+KK+ ++ + E+ +
Sbjct: 27 VLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKC 84
Query: 817 IRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR----YEVVLGV 871
+ HKNI+ LL + K+L+ Y+ + + L + D E Y+++ G+
Sbjct: 85 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 144
Query: 872 AHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQ 931
H LH I+H D+K N+++ + DFGLAR S P
Sbjct: 145 KH----LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-------FMMTPY 190
Query: 932 LAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLM 989
+ Y Y APE E D++S G ++ E++ + PG + QW ++
Sbjct: 191 VVTRY-YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK----ILFPGRDYIDQWNKVI 243
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 90/213 (42%), Gaps = 23/213 (10%)
Query: 772 NVIGTGSSGVVYRVT-IPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
+GTGS G V V + G A+K K+ + +E + L ++ +V+L
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 826 -LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
+ N NL ++ +Y P G + S L G+ ++ AR+ + YLH
Sbjct: 107 EFSFKDNSNLYMVM-EYAPGGEMFSHLRRIGRF-SEPHARF-YAAQIVLTFEYLHS---L 160
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+++ D+K N+++ + DFG A+ V G C G+ Y+APE
Sbjct: 161 DLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLC----------GTPEYLAPEII 210
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
+ + D ++ GV++ E+ G P P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 83/208 (39%), Gaps = 20/208 (9%)
Query: 787 IPNGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGW----GSNKNLKLLF 838
+ +G A+K++ + E +++ L H NI+RL+ + K+ L
Sbjct: 51 LHDGHFYALKRILCHEQQDREEAQREADMHRL--FNHPNILRLVAYCLRERGAKHEAWLL 108
Query: 839 YDYLPNGSL-SSLLHGAGKGGADWEAR-YEVVLGVAHALAYLHHDCMPPILHGDVKAMNV 896
+ G+L + + KG E + ++LG+ L +H H D+K N+
Sbjct: 109 LPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNI 165
Query: 897 LLGPGYQAYLADFGLAR--IVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQR---ITE 951
LLG Q L D G + G + Y APE S+Q I E
Sbjct: 166 LLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDE 225
Query: 952 KSDVYSFGVVLLEVLTGRHPLDPTLPGG 979
++DV+S G VL ++ G P D G
Sbjct: 226 RTDVWSLGCVLYAMMFGEGPYDMVFQKG 253
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 14/140 (10%)
Query: 836 LLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMN 895
L+ + L G L S + G E++ + A+ YLH I H DVK N
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 145
Query: 896 VLLG---PGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
+L P L DFG A+ + N + + Y+APE ++ +
Sbjct: 146 LLYTSKRPNAILKLTDFGFAK--------ETTSHNSLTEPCYTPYYVAPEVLGPEKYDKS 197
Query: 953 SDVYSFGVVLLEVLTGRHPL 972
D++S GV++ +L G P
Sbjct: 198 CDMWSLGVIMYILLCGYPPF 217
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 72/177 (40%), Gaps = 5/177 (2%)
Query: 131 IDLSGNSLWGEIPTEVCRLRKLESLYLNTNLLEGEIPSDI-GNLSSLAYLTLYDNQLSGK 189
+DL N L RL KL LYLN N L+ +P+ I L +L L + DN+L
Sbjct: 42 LDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQT-LPAGIFKELKNLETLWVTDNKLQAL 100
Query: 190 IPKSIGALSKLQVFRAGGNQNLKGELPWEIGNCSNLVMLGLAETSISGNVPSSIGMLERI 249
L L R NQ LK P + + L L L + L +
Sbjct: 101 PIGVFDQLVNLAELRLDRNQ-LKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSL 159
Query: 250 QTIAIYTSLLSGPIPE-EIGNCSELQNLYLYQNSISGPIPGRIGALSKLKSLLLWQN 305
+ + +Y + L +PE +EL+ L L N + G +L KLK L L +N
Sbjct: 160 KELRLYNNQLKR-VPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 37.0 bits (84), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 273 LQNLYLYQNSISGPIPGRIGALSKLKSLLLWQNSLVGAIPDELGSCTELTVVDFSDNLLT 332
L+ L++ N + G L L L L +N L P S T+LT + N L
Sbjct: 87 LETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ 146
Query: 333 GSIPRS-FGNLLKLQELQLSVNQLSGTIPIEIATCTALTHLEIDNNAIS 380
S+P+ F L L+EL+L NQL T L L++DNN +
Sbjct: 147 -SLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK 194
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 13/193 (6%)
Query: 166 IPSDIGNLSSLAYLTLYDNQLSGKIPKSIGALSKLQVFRAGGN--QNLKGELPWEIGNCS 223
IPS+I + L L N+LS K+ L+KL++ N Q L + E+
Sbjct: 31 IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKEL---K 85
Query: 224 NLVMLGLAETSISGNVPSSIGMLERIQTIA---IYTSLLSGPIPEEIGNCSELQNLYLYQ 280
NL L + + + +P IG+ +++ +A + + L P + ++L L L
Sbjct: 86 NLETLWVTDNKLQA-LP--IGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGY 142
Query: 281 NSISGPIPGRIGALSKLKSLLLWQNSLVGAIPDELGSCTELTVVDFSDNLLTGSIPRSFG 340
N + G L+ LK L L+ N L TEL + +N L +F
Sbjct: 143 NELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFD 202
Query: 341 NLLKLQELQLSVN 353
+L KL+ LQL N
Sbjct: 203 SLEKLKMLQLQEN 215
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 3/119 (2%)
Query: 93 SLPS-IFQPLKSLKRLIISSCNLTGTIPKEFGDYRELTFIDLSGNSLWGEIPTEVCRLRK 151
+LP+ IF+ LK+L+ L ++ L F L + L N L P L K
Sbjct: 75 TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTK 134
Query: 152 LESLYLNTNLLEGEIPSDIGNLSSLAYLTLYDNQLSGKIPK-SIGALSKLQVFRAGGNQ 209
L L L N L+ L+SL L LY+NQL ++P+ + L++L+ + NQ
Sbjct: 135 LTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLK-RVPEGAFDKLTELKTLKLDNNQ 192
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 83/200 (41%), Gaps = 20/200 (10%)
Query: 233 TSISGNVPSSIGMLERIQTIAIYTSLLSGPIPEEIGNCSELQNLYLYQNSISGPIPGRIG 292
T+I N+P+ L+ + ++ LS + ++L+ LYL N + G
Sbjct: 29 TAIPSNIPADTKKLD------LQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFK 82
Query: 293 ALSKLKSLLLWQNSLVGAIP----DELGSCTELTVVDFSDNLLTGSIPRSFGNLLKLQEL 348
L L++L + N L A+P D+L + EL + N L PR F +L KL L
Sbjct: 83 ELKNLETLWVTDNKL-QALPIGVFDQLVNLAELRL---DRNQLKSLPPRVFDSLTKLTYL 138
Query: 349 QLSVNQLSGTIPIEIATCTALTHLEIDNNAISGEIPADIGNINGLTLFFAWK--NKLTGN 406
L N+L T+L L + NN + +P G + LT K N
Sbjct: 139 SLGYNELQSLPKGVFDKLTSLKELRLYNNQLK-RVPE--GAFDKLTELKTLKLDNNQLKR 195
Query: 407 IPE-SLSQCQELQALDFSYN 425
+PE + ++L+ L N
Sbjct: 196 VPEGAFDSLEKLKMLQLQEN 215
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 73/178 (41%), Gaps = 11/178 (6%)
Query: 263 IPEEIGNCSELQNLYLYQNSISGPIPGRIGALSKLKSLLLWQN---SLVGAIPDELGSCT 319
IP I ++ + L L N +S L+KL+ L L N +L I EL +
Sbjct: 31 IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLE 88
Query: 320 ELTVVDFSDNLLTGSIPRSFGNLLKLQELQLSVNQLSGTIPIEIATCTALTHLEIDNNAI 379
L V +DN L F L+ L EL+L NQL P + T LT+L + N +
Sbjct: 89 TLWV---TDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNEL 145
Query: 380 SGEIPADIGNINGLTLFFAWKNKLTGNIPE-SLSQCQELQALDFSYNNLSGPIPKEIF 436
+ L + N+L +PE + + EL+ L N L +P+ F
Sbjct: 146 QSLPKGVFDKLTSLKELRLYNNQLK-RVPEGAFDKLTELKTLKLDNNQLKR-VPEGAF 201
Score = 35.0 bits (79), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 60/145 (41%), Gaps = 8/145 (5%)
Query: 516 LDLHSNGLTGSVPDTLPTSLQLVDLSDNRLSGSLAHSIGSLTEXXXXXXXXNQLSGRIPA 575
+D S LT ++P +P + +DL N+LS + + LT+ N+L +PA
Sbjct: 21 VDCSSKKLT-AIPSNIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQT-LPA 78
Query: 576 EILS-CRKLILLDIGNNRFSGEIPKELGQXXXXXXXXXXXXXQFSGEIPSEFSGLTKLGI 634
I + L L + +N+ +P + Q P F LTKL
Sbjct: 79 GIFKELKNLETLWVTDNKLQA-LPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTY 137
Query: 635 LDLSHNKL----SGDLDALASLQNL 655
L L +N+L G D L SL+ L
Sbjct: 138 LSLGYNELQSLPKGVFDKLTSLKEL 162
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 809 SEIQTLGSIRHKNIVRL-LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEV 867
+E + L ++ +V+L + N NL ++ +Y+P G + S L G+ ++ AR+
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVM-EYVPGGEMFSHLRRIGRF-SEPHARF-Y 167
Query: 868 VLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927
+ YLH +++ D+K N+L+ + DFG A+ V G C
Sbjct: 168 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 220
Query: 928 QRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
G+ Y+APE + + D ++ GV++ E+ G P P
Sbjct: 221 ------GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 90/213 (42%), Gaps = 23/213 (10%)
Query: 772 NVIGTGSSGVVYRVT-IPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
+GTGS G V V + G A+K K+ + +E + L ++ +V+L
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 826 -LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
+ N NL ++ +Y P G + S L G+ ++ AR+ + YLH
Sbjct: 107 EFSFKDNSNLYMVM-EYAPGGEMFSHLRRIGRF-SEPHARF-YAAQIVLTFEYLHS---L 160
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+++ D+K N+++ + DFG A+ V G C G+ Y+APE
Sbjct: 161 DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----------GTPEYLAPEII 210
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
+ + D ++ GV++ E+ G P P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 103/226 (45%), Gaps = 27/226 (11%)
Query: 755 QKLDFSIDDVVRNLTSANVIGTGSSGVV---YRVTIPNGETLAVKKMWSSDESGAFSS-- 809
Q+L+ ++ +V + L +G+G+ G V Y + + +AVKK+ +S +
Sbjct: 17 QELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRT 74
Query: 810 --EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGA--DWEAR 864
E++ L ++H+N++ LL + +++ YL + + L+ K A D +
Sbjct: 75 YRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQ 134
Query: 865 YEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
+ +V + L Y+H I+H D+K NV + + + DFGLAR D+ +
Sbjct: 135 F-LVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR----QADEEMT 186
Query: 925 KTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ Y APE + + D++S G ++ E+L G+
Sbjct: 187 G------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 80/200 (40%), Gaps = 16/200 (8%)
Query: 773 VIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNK 832
++ ++G Y + I E + K DE +E + L + RH + L +
Sbjct: 26 LVKEKATGRYYAMKILKKEVIVAK-----DEVAHTLTENRVLQNSRHP-FLTALKYSFQT 79
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ +L F NG + ++ AR+ + AL YLH + +++ D+K
Sbjct: 80 HDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLHSE--KNVVYRDLK 136
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
N++L + DFGL + G D K G+ Y+APE
Sbjct: 137 LENLMLDKDGHIKITDFGLCK--EGIKDGATMKX-----FCGTPEYLAPEVLEDNDYGRA 189
Query: 953 SDVYSFGVVLLEVLTGRHPL 972
D + GVV+ E++ GR P
Sbjct: 190 VDWWGLGVVMYEMMCGRLPF 209
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 80/200 (40%), Gaps = 16/200 (8%)
Query: 773 VIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNK 832
++ ++G Y + I E + K DE +E + L + RH + L +
Sbjct: 28 LVKEKATGRYYAMKILKKEVIVAK-----DEVAHTLTENRVLQNSRHP-FLTALKYSFQT 81
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ +L F NG + ++ AR+ + AL YLH + +++ D+K
Sbjct: 82 HDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLHSE--KNVVYRDLK 138
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
N++L + DFGL + G D K G+ Y+APE
Sbjct: 139 LENLMLDKDGHIKITDFGLCK--EGIKDGATMKX-----FCGTPEYLAPEVLEDNDYGRA 191
Query: 953 SDVYSFGVVLLEVLTGRHPL 972
D + GVV+ E++ GR P
Sbjct: 192 VDWWGLGVVMYEMMCGRLPF 211
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 11/82 (13%)
Query: 85 LKAVDLQG--------SLPSIFQPLKSLKRLIISSCNLTGTIPKEFGDYRELTFIDLSGN 136
L+ ++LQG S ++ Q + SL+ LI+SSCNL + F R + +DLS N
Sbjct: 450 LRHLNLQGNSFQDGSISKTNLLQMVGSLEILILSSCNLLSIDQQAFHGLRNVNHLDLSHN 509
Query: 137 SLWGEIPTEVCRLRKLESLYLN 158
SL G+ + L L+ LYLN
Sbjct: 510 SLTGD---SMDALSHLKGLYLN 528
Score = 36.2 bits (82), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 77/188 (40%), Gaps = 29/188 (15%)
Query: 482 EMGNLKHLNFVDMSENHLVGGIPPSVVGCQSLEFLDLHSNGLTGSVPDTLPTSLQLV--- 538
++ NL+HL ++++S N +G + C LE LD+ L P + +L L+
Sbjct: 370 QLKNLRHLQYLNLSYNEPLGLEDQAFKECPQLELLDVAFTHLHVKAPHSPFQNLHLLRVL 429
Query: 539 DLSDNRLSGSLAHSIGSLTEXXXXXXXXNQLSGRIPAEILSCRKLILLDIGNNRFSGEIP 598
+LS L S H + L + R L L GN+ G I
Sbjct: 430 NLSHCLLDTSNQHLLAGLQDL---------------------RHLNLQ--GNSFQDGSIS 466
Query: 599 K-ELGQXXXXXXXXXXXXXQFSGEIPSEFSGLTKLGILDLSHNKLSGD-LDALASLQNLV 656
K L Q F GL + LDLSHN L+GD +DAL+ L+ L
Sbjct: 467 KTNLLQMVGSLEILILSSCNLLSIDQQAFHGLRNVNHLDLSHNSLTGDSMDALSHLKGLY 526
Query: 657 SLNVSFND 664
LN++ N+
Sbjct: 527 -LNMASNN 533
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 80/200 (40%), Gaps = 16/200 (8%)
Query: 773 VIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNK 832
++ ++G Y + I E + K DE +E + L + RH + L +
Sbjct: 27 LVKEKATGRYYAMKILKKEVIVAK-----DEVAHTLTENRVLQNSRHP-FLTALKYSFQT 80
Query: 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVK 892
+ +L F NG + ++ AR+ + AL YLH + +++ D+K
Sbjct: 81 HDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLHSE--KNVVYRDLK 137
Query: 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
N++L + DFGL + G D K G+ Y+APE
Sbjct: 138 LENLMLDKDGHIKITDFGLCK--EGIKDGATMKX-----FCGTPEYLAPEVLEDNDYGRA 190
Query: 953 SDVYSFGVVLLEVLTGRHPL 972
D + GVV+ E++ GR P
Sbjct: 191 VDWWGLGVVMYEMMCGRLPF 210
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 103/226 (45%), Gaps = 27/226 (11%)
Query: 755 QKLDFSIDDVVRNLTSANVIGTGSSGVV---YRVTIPNGETLAVKKMWSSDESGAFSS-- 809
Q+L+ ++ +V + L +G+G+ G V Y + + +AVKK+ +S +
Sbjct: 9 QELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRT 66
Query: 810 --EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGA--DWEAR 864
E++ L ++H+N++ LL + +++ YL + + L+ K A D +
Sbjct: 67 YRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQ 126
Query: 865 YEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
+ +V + L Y+H I+H D+K NV + + + DFGLAR D+ +
Sbjct: 127 F-LVYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGLAR----QADEEMT 178
Query: 925 KTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ Y APE + + D++S G ++ E+L G+
Sbjct: 179 G------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 23/213 (10%)
Query: 772 NVIGTGSSGVVYRVT-IPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
+GTGS G V V + G A+K K+ + +E + L ++ +V+L
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 826 -LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
+ N NL ++ +Y P G + S L G+ AR+ + YLH
Sbjct: 107 EFSFKDNSNLYMVM-EYAPGGEMFSHLRRIGRFXEP-HARF-YAAQIVLTFEYLHS---L 160
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+++ D+K N+++ + DFG A+ V G C G+ Y+APE
Sbjct: 161 DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----------GTPEYLAPEII 210
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
+ + D ++ GV++ E+ G P P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 94/251 (37%), Gaps = 53/251 (21%)
Query: 767 NLTSANVIGTGSSGVVYRVTIPNG-ETLAVKKMWSSDES----GAFSSEIQTLGSIRHKN 821
N ++IG GS G VY N + +A+KK+ E EI L ++
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 88
Query: 822 IVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYE--VVLGVAHALAYLH 879
I+RL ++ D L L +L A +D + ++ + L H L+
Sbjct: 89 IIRLHDL-------IIPEDLLKFDELYIVLEIAD---SDLKKLFKTPIFLTEQHVKTILY 138
Query: 880 HDCMPP-------ILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNC--------- 923
+ + I+H D+K N LL + DFGLAR ++ D +
Sbjct: 139 NLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEE 198
Query: 924 ------SKTNQRPQLAG---SYGYMAPEHASMQR-ITEKSDVYSFGVVLLEVL------- 966
N + QL + Y APE +Q T D++S G + E+L
Sbjct: 199 NEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHI 258
Query: 967 ---TGRHPLDP 974
T R PL P
Sbjct: 259 NNPTNRFPLFP 269
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 90/226 (39%), Gaps = 34/226 (15%)
Query: 767 NLTSANVIGTGSSGVVYR-VTIPNGETLAVKKMWSSDESGAFSSE---------IQTLGS 816
N ++G G S VV R + P + AVK + G+FS+E ++ +
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVK-IIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 817 IR----HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVA 872
+R H NI++L L +D + G L L K + +++ +
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKIMRALL 134
Query: 873 HALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQL 932
+ LH I+H D+K N+LL L DFG + + + +
Sbjct: 135 EVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG--------EKLRSV 183
Query: 933 AGSYGYMAPE--HASMQR----ITEKSDVYSFGVVLLEVLTGRHPL 972
G+ Y+APE SM ++ D++S GV++ +L G P
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 103/226 (45%), Gaps = 27/226 (11%)
Query: 755 QKLDFSIDDVVRNLTSANVIGTGSSGVV---YRVTIPNGETLAVKKMWSSDESGAFSS-- 809
Q+L+ ++ +V + L +G+G+ G V Y + + +AVKK+ +S +
Sbjct: 17 QELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRT 74
Query: 810 --EIQTLGSIRHKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGA--DWEAR 864
E++ L ++H+N++ LL + +++ YL + + L+ K A D +
Sbjct: 75 YRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQ 134
Query: 865 YEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
+ +V + L Y+H I+H D+K NV + + + DFGLAR D+ +
Sbjct: 135 F-LVYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLAR----QADEEMT 186
Query: 925 KTNQRPQLAGSYGYMAPE-HASMQRITEKSDVYSFGVVLLEVLTGR 969
+ Y APE + + D++S G ++ E+L G+
Sbjct: 187 G------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 39.7 bits (91), Expect = 0.008, Method: Composition-based stats.
Identities = 37/140 (26%), Positives = 57/140 (40%), Gaps = 14/140 (10%)
Query: 836 LLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMN 895
L+ + L G L S + G E++ + A+ YLH I H DVK N
Sbjct: 96 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 152
Query: 896 VLLG---PGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
+L P L DFG A+ + S + Y Y+APE ++ +
Sbjct: 153 LLYTSKRPNAILKLTDFGFAK-------ETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKS 204
Query: 953 SDVYSFGVVLLEVLTGRHPL 972
D++S GV++ +L G P
Sbjct: 205 CDMWSLGVIMYILLCGYPPF 224
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 39.7 bits (91), Expect = 0.008, Method: Composition-based stats.
Identities = 37/140 (26%), Positives = 57/140 (40%), Gaps = 14/140 (10%)
Query: 836 LLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMN 895
L+ + L G L S + G E++ + A+ YLH I H DVK N
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 147
Query: 896 VLLG---PGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEK 952
+L P L DFG A+ + S + Y Y+APE ++ +
Sbjct: 148 LLYTSKRPNAILKLTDFGFAK-------ETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKS 199
Query: 953 SDVYSFGVVLLEVLTGRHPL 972
D++S GV++ +L G P
Sbjct: 200 CDMWSLGVIMYILLCGYPPF 219
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 85/201 (42%), Gaps = 23/201 (11%)
Query: 477 GTIPS-EMGNLKHLNFVDMSENHLVGGIPPSVVGCQSLEFLDLHSNGLT----GSVPDTL 531
G P+ ++ +LK L F GG S V SLEFLDL NGL+ S D
Sbjct: 317 GQFPTLKLKSLKRLTFTSNK-----GGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFG 371
Query: 532 PTSLQLVDLSDNRLSGSLAHSIG--SLTEXXXXXXXXNQLSGRIPAEILSCRKLILLDIG 589
TSL+ +DLS N + ++ +G L Q+S + LS R LI LDI
Sbjct: 372 TTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEF--SVFLSLRNLIYLDIS 429
Query: 590 NNR----FSGEIPKELGQXXXXXXXXXXXXXQFSGEIPSEFSGLTKLGILDLSHNKLSG- 644
+ F+G I L F +P F+ L L LDLS +L
Sbjct: 430 HTHTRVAFNG-IFNGLSSLEVLKMAGNSFQENF---LPDIFTELRNLTFLDLSQCQLEQL 485
Query: 645 DLDALASLQNLVSLNVSFNDF 665
A SL +L LN+S N+F
Sbjct: 486 SPTAFNSLSSLQVLNMSHNNF 506
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Query: 91 QGSLPSIFQPLKSLKRLIISSCNLTGTIPKEFGDYRELTFIDLSGNSLWGEIPTEVCRLR 150
+ LP IF L++L L +S C L P F L +++S N+ + L
Sbjct: 459 ENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLN 518
Query: 151 KLESLYLNTNLLEGEIPSDIGNL-SSLAYLTLYDNQLS 187
L+ L + N + ++ + SSLA+L L N +
Sbjct: 519 SLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 556
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 809 SEIQTLGSIRHKNIVRL-LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEV 867
+E + L ++ +V+L + N NL ++ +Y+ G + S L G+ ++ AR+
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVM-EYVAGGEMFSHLRRIGRF-SEPHARF-Y 146
Query: 868 VLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927
+ YLH +++ D+K N+L+ + DFG A+ V G
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---------- 193
Query: 928 QRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
+ LAG+ Y+APE + + D ++ GV++ E+ G P P
Sbjct: 194 RTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 17/170 (10%)
Query: 809 SEIQTLGSIRHKNIVRL-LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEV 867
+E + L ++ +V+L + N NL ++ +Y+ G + S L G+ A+ AR+
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVM-EYVAGGEMFSHLRRIGRF-AEPHARF-Y 146
Query: 868 VLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927
+ YLH +++ D+K N+L+ + DFG A+ V G C
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 928 QRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
G+ Y+APE + + D ++ GV++ E+ G P P
Sbjct: 200 ------GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 39.3 bits (90), Expect = 0.012, Method: Composition-based stats.
Identities = 53/226 (23%), Positives = 90/226 (39%), Gaps = 34/226 (15%)
Query: 767 NLTSANVIGTGSSGVVYR-VTIPNGETLAVKKMWSSDESGAFSSE---------IQTLGS 816
N ++G G S VV R + P + AVK + G+FS+E ++ +
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVK-IIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 817 IR----HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVA 872
+R H NI++L L +D + G L L K + +++ +
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKIMRALL 134
Query: 873 HALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQL 932
+ LH I+H D+K N+LL L DFG + + ++
Sbjct: 135 EVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSC--------QLDPGEKLREV 183
Query: 933 AGSYGYMAPE--HASMQR----ITEKSDVYSFGVVLLEVLTGRHPL 972
G+ Y+APE SM ++ D++S GV++ +L G P
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 39.3 bits (90), Expect = 0.012, Method: Composition-based stats.
Identities = 53/226 (23%), Positives = 90/226 (39%), Gaps = 34/226 (15%)
Query: 767 NLTSANVIGTGSSGVVYR-VTIPNGETLAVKKMWSSDESGAFSSE---------IQTLGS 816
N ++G G S VV R + P + AVK + G+FS+E ++ +
Sbjct: 5 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVK-IIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 817 IR----HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVA 872
+R H NI++L L +D + G L L K + +++ +
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKIMRALL 121
Query: 873 HALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQL 932
+ LH I+H D+K N+LL L DFG + + ++
Sbjct: 122 EVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSC--------QLDPGEKLREV 170
Query: 933 AGSYGYMAPE--HASMQR----ITEKSDVYSFGVVLLEVLTGRHPL 972
G+ Y+APE SM ++ D++S GV++ +L G P
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 39.3 bits (90), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 17/170 (10%)
Query: 809 SEIQTLGSIRHKNIVRL-LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEV 867
+E + L ++ +V+L + N NL ++ +Y P G + S L G+ ++ AR+
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVM-EYAPGGEMFSHLRRIGRF-SEPHARF-Y 147
Query: 868 VLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927
+ YLH +++ D+K N+++ + DFG A+ V G C
Sbjct: 148 AAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---- 200
Query: 928 QRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
G+ Y+APE + + D ++ GV++ E+ G P P
Sbjct: 201 ------GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 38.9 bits (89), Expect = 0.014, Method: Composition-based stats.
Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 42/221 (19%)
Query: 799 WSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLK--LLFYDYLPNGSLSSLLHGAGK 856
WS+ +S F+ E L H N++ +LG + L ++P GSL ++LH
Sbjct: 46 WSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTN 105
Query: 857 GGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVS 916
D + L +A +A+L H P I + + +V++ A ++ +A +
Sbjct: 106 FVVDQSQAVKFALDMARGMAFL-HTLEPLIPRHALNSRSVMIDEDMTARIS---MADV-- 159
Query: 917 GSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITE-----KSDVYSFGVVLLEVLTGRHP 971
+ Q P + ++APE ++Q+ E +D++SF V+L E++T P
Sbjct: 160 -------KFSFQSPGRMYAPAWVAPE--ALQKKPEDTNRRSADMWSFAVLLWELVTREVP 210
Query: 972 -----------------LDPTLPGG-APLVQWTPLMFLMLN 994
L PT+P G +P V + LM + +N
Sbjct: 211 FADLSNMEIGMKVALEGLRPTIPPGISPHV--SKLMKICMN 249
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 90/213 (42%), Gaps = 23/213 (10%)
Query: 772 NVIGTGSSGVVYRVT-IPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
+GTGS G V V + G A+K K+ + +E + L ++ +V+L
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 826 -LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
+ N NL ++ +Y+ G + S L G+ ++ AR+ + YLH
Sbjct: 107 EFSFKDNSNLYMVM-EYVAGGEMFSHLRRIGRF-SEPHARF-YAAQIVLTFEYLHS---L 160
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+++ D+K N+L+ + DFG A+ V G C G+ Y+APE
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----------GTPEYLAPEII 210
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
+ + D ++ GV++ E+ G P P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 23/213 (10%)
Query: 772 NVIGTGSSGVVYRVT-IPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
+GTGS G V V + G A+K K+ + +E + L ++ + +L
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKL 107
Query: 826 -LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
+ N NL ++ +Y P G + S L G+ ++ AR+ + YLH
Sbjct: 108 EFSFKDNSNLYMVM-EYAPGGEMFSHLRRIGRF-SEPHARF-YAAQIVLTFEYLHS---L 161
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+++ D+K N+++ + DFG A+ V G C G+ Y+APE
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----------GTPEYLAPEII 211
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
+ + D ++ GV++ E+ G P P
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 23/213 (10%)
Query: 772 NVIGTGSSGVVYRVT-IPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
+GTGS G V V + G A+K K+ + +E + L ++ + +L
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKL 107
Query: 826 -LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
+ N NL ++ +Y P G + S L G+ ++ AR+ + YLH
Sbjct: 108 EFSFKDNSNLYMVM-EYAPGGEMFSHLRRIGRF-SEPHARF-YAAQIVLTFEYLHS---L 161
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+++ D+K N+++ + DFG A+ V G C G+ Y+APE
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----------GTPEYLAPEII 211
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
+ + D ++ GV++ E+ G P P
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 9/108 (8%)
Query: 866 EVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLA-RIVSGSGDDNCS 924
+ A ++ L H I++ D+K NVLL ++D GLA + +G +
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ-----T 344
Query: 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
KT AG+ G+MAPE + D ++ GV L E++ R P
Sbjct: 345 KTKG---YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 9/108 (8%)
Query: 866 EVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLA-RIVSGSGDDNCS 924
+ A ++ L H I++ D+K NVLL ++D GLA + +G +
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ-----T 344
Query: 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
KT AG+ G+MAPE + D ++ GV L E++ R P
Sbjct: 345 KTKG---YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 9/108 (8%)
Query: 866 EVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLA-RIVSGSGDDNCS 924
+ A ++ L H I++ D+K NVLL ++D GLA + +G +
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ-----T 344
Query: 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
KT AG+ G+MAPE + D ++ GV L E++ R P
Sbjct: 345 KTKG---YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 9/108 (8%)
Query: 866 EVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLA-RIVSGSGDDNCS 924
+ A ++ L H I++ D+K NVLL ++D GLA + +G +
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ-----T 344
Query: 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
KT AG+ G+MAPE + D ++ GV L E++ R P
Sbjct: 345 KTKG---YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 94/233 (40%), Gaps = 19/233 (8%)
Query: 746 DDTWEMTLYQKLDFSIDDVVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSD--- 802
+D W+ + Q ++ V +G+G+ GVV+R + V K ++
Sbjct: 31 EDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPL 90
Query: 803 ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWE 862
+ +EI + + H ++ L +K +L ++L G L + D++
Sbjct: 91 DKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRI-----AAEDYK 145
Query: 863 -ARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLL--GPGYQAYLADFGLARIVSGSG 919
+ EV+ + A L H I+H D+K N++ + DFGLA +
Sbjct: 146 MSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLA--TKLNP 203
Query: 920 DDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
D+ T + A APE + + +D+++ GV+ +L+G P
Sbjct: 204 DEIVKVTTATAEFA------APEIVDREPVGFYTDMWAIGVLGYVLLSGLSPF 250
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 74/189 (39%), Gaps = 20/189 (10%)
Query: 67 CKWFGIHCSSNGEV-----VEISLKAVDLQ----GSLPS-IFQPLKSLKRLIISSCNLTG 116
C + C S G + +DL+ SLP+ +F L SL +L + L
Sbjct: 7 CSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQS 66
Query: 117 TIPKEFGDYRELTFIDLSGNSLWGEIPTEVC-RLRKLESLYLNTNLLEGEIPSDIGNLSS 175
F LT+++LS N L +P V +L +L+ L LNTN L+ L+
Sbjct: 67 LPNGVFNKLTSLTYLNLSTNQL-QSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQ 125
Query: 176 LAYLTLYDNQLSGKIPKSIGALSKLQVFRAGGNQNLKGELPWEIGNCSNLVMLGLAETSI 235
L L LY NQL L+ LQ N PW+ C + L
Sbjct: 126 LKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDN-------PWDC-TCPGIRYLSEWINKH 177
Query: 236 SGNVPSSIG 244
SG V +S G
Sbjct: 178 SGVVRNSAG 186
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 23/173 (13%)
Query: 809 SEIQTLGSIRHKNIVRL-LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARY-- 865
+E + L ++ +V+L + N NL ++ +Y+ G + S L G+ ++ AR+
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVM-EYVAGGEMFSHLRRIGRF-SEPHARFYA 168
Query: 866 -EVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
++VL YLH +++ D+K N+L+ + DFG A+ V G+ C
Sbjct: 169 AQIVL----TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLC- 220
Query: 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
G+ Y+APE + + D ++ GV++ E+ G P P
Sbjct: 221 ---------GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 87/213 (40%), Gaps = 23/213 (10%)
Query: 772 NVIGTGSSGVVYRVT-IPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
+GTGS G V V + G A+K K+ + +E + L ++ + +L
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKL 107
Query: 826 -LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
+ N NL ++ +Y P G + S L G+ AR+ + YLH
Sbjct: 108 EFSFKDNSNLYMVM-EYAPGGEMFSHLRRIGRFXEP-HARF-YAAQIVLTFEYLHS---L 161
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+++ D+K N+++ + DFG A+ V G C G+ Y+APE
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----------GTPEYLAPEII 211
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
+ + D ++ GV++ E+ G P P
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 38.5 bits (88), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 84/201 (41%), Gaps = 23/201 (11%)
Query: 477 GTIPS-EMGNLKHLNFVDMSENHLVGGIPPSVVGCQSLEFLDLHSNGLT----GSVPDTL 531
G P+ ++ +LK L F GG S V SLEFLDL NGL+ S D
Sbjct: 341 GQFPTLKLKSLKRLTFTSNK-----GGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFG 395
Query: 532 PTSLQLVDLSDNRLSGSLAHSIG--SLTEXXXXXXXXNQLSGRIPAEILSCRKLILLDIG 589
SL+ +DLS N + ++ +G L Q+S + LS R LI LDI
Sbjct: 396 TISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEF--SVFLSLRNLIYLDIS 453
Query: 590 NNR----FSGEIPKELGQXXXXXXXXXXXXXQFSGEIPSEFSGLTKLGILDLSHNKLSG- 644
+ F+G I L F +P F+ L L LDLS +L
Sbjct: 454 HTHTRVAFNG-IFNGLSSLEVLKMAGNSFQENF---LPDIFTELRNLTFLDLSQCQLEQL 509
Query: 645 DLDALASLQNLVSLNVSFNDF 665
A SL +L LN+S N+F
Sbjct: 510 SPTAFNSLSSLQVLNMSHNNF 530
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Query: 91 QGSLPSIFQPLKSLKRLIISSCNLTGTIPKEFGDYRELTFIDLSGNSLWGEIPTEVCRLR 150
+ LP IF L++L L +S C L P F L +++S N+ + L
Sbjct: 483 ENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLN 542
Query: 151 KLESLYLNTNLLEGEIPSDIGNL-SSLAYLTLYDNQLS 187
L+ L + N + ++ + SSLA+L L N +
Sbjct: 543 SLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 580
Score = 29.6 bits (65), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 47/120 (39%), Gaps = 1/120 (0%)
Query: 91 QGSLPSIFQPLKSLKRLIISSCNLTGTIPKEFGDYRELTFIDLSGNSLWGE-IPTEVCRL 149
Q S S+F L++L L IS + F L + ++GNS +P L
Sbjct: 434 QMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTEL 493
Query: 150 RKLESLYLNTNLLEGEIPSDIGNLSSLAYLTLYDNQLSGKIPKSIGALSKLQVFRAGGNQ 209
R L L L+ LE P+ +LSSL L + N L+ LQV N
Sbjct: 494 RNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNH 553
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 90/213 (42%), Gaps = 23/213 (10%)
Query: 772 NVIGTGSSGVVYRVT-IPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
+GTGS G V V +G A+K K+ + +E + L ++ +V+L
Sbjct: 34 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 93
Query: 826 -LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
+ N NL ++ +Y+ G + S L G+ ++ AR+ + YLH
Sbjct: 94 EFSFKDNSNLYMVM-EYVAGGEMFSHLRRIGRF-SEPHARF-YAAQIVLTFEYLHS---L 147
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+++ D+K N+L+ + DFG A+ V G C G+ Y+APE
Sbjct: 148 DLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLC----------GTPEYLAPEII 197
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
+ + D ++ GV++ E+ G P P
Sbjct: 198 LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 230
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 61/159 (38%), Gaps = 18/159 (11%)
Query: 821 NIVRLLGWGSN----KNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALA 876
+IVR++ N + L+ + L G L S + G E+ + A+
Sbjct: 116 HIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQ 175
Query: 877 YLHHDCMPPILHGDVKAMNVLL---GPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
YLH I H DVK N+L P L DFG A+ + N
Sbjct: 176 YLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH--------NSLTTPC 224
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
+ Y+APE ++ + D +S GV+ +L G P
Sbjct: 225 YTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPF 263
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 46/107 (42%)
Query: 271 SELQNLYLYQNSISGPIPGRIGALSKLKSLLLWQNSLVGAIPDELGSCTELTVVDFSDNL 330
+ L+ L L +N + G L+ L L L+ N L T LT +D +N
Sbjct: 109 TNLKELVLVENQLQSLPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQ 168
Query: 331 LTGSIPRSFGNLLKLQELQLSVNQLSGTIPIEIATCTALTHLEIDNN 377
L F L +L++L L+ NQL T+LTH+ + NN
Sbjct: 169 LQSLPEGVFDKLTQLKQLSLNDNQLKSVPDGVFDRLTSLTHIWLLNN 215
Score = 30.8 bits (68), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 128 LTFIDLSGNSLWGEIPTEVC-RLRKLESLYLNTNLLEGEIPSDIGNLSSLAYLTLYDNQL 186
LT++ L+GN L +P V +L L+ L L N L+ L++L YL LY NQL
Sbjct: 87 LTYLILTGNQL-QSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLYLYHNQL 145
Query: 187 SGKIPKSI-GALSKLQVFRAGGNQ 209
+PK + L+ L NQ
Sbjct: 146 QS-LPKGVFDKLTNLTRLDLDNNQ 168
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 17/170 (10%)
Query: 809 SEIQTLGSIRHKNIVRL-LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEV 867
+E + L ++ +V+L + N NL ++ +Y+ G + S L G+ ++ AR+
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVM-EYVAGGEMFSHLRRIGRF-SEPHARF-Y 146
Query: 868 VLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927
+ YLH +++ D+K N+L+ + DFG A+ V G C
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 928 QRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
G+ Y+APE + + D ++ GV++ E+ G P P
Sbjct: 200 ------GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 38.1 bits (87), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 17/170 (10%)
Query: 809 SEIQTLGSIRHKNIVRL-LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEV 867
+E + L ++ +V+L + N NL ++ +Y+ G + S L G+ ++ AR+
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVM-EYVAGGEMFSHLRRIGRF-SEPHARF-Y 146
Query: 868 VLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927
+ YLH +++ D+K N+L+ + DFG A+ V G C
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 928 QRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
G+ Y+APE + + D ++ GV++ E+ G P P
Sbjct: 200 ------GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 38.1 bits (87), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 17/170 (10%)
Query: 809 SEIQTLGSIRHKNIVRL-LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEV 867
+E + L ++ +V+L + N NL ++ +Y+ G + S L G+ ++ AR+
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVM-EYVAGGEMFSHLRRIGRF-SEPHARF-Y 147
Query: 868 VLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927
+ YLH +++ D+K N+L+ + DFG A+ V G C
Sbjct: 148 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 200
Query: 928 QRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
G+ Y+APE + + D ++ GV++ E+ G P P
Sbjct: 201 ------GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 17/170 (10%)
Query: 809 SEIQTLGSIRHKNIVRL-LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEV 867
+E + L ++ +V+L + N NL ++ +Y+ G + S L G+ ++ AR+
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVM-EYVAGGEMFSHLRRIGRF-SEPHARF-Y 146
Query: 868 VLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927
+ YLH +++ D+K N+L+ + DFG A+ V G C
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 928 QRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
G+ Y+APE + + D ++ GV++ E+ G P P
Sbjct: 200 ------GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 17/170 (10%)
Query: 809 SEIQTLGSIRHKNIVRL-LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEV 867
+E + L ++ +V+L + N NL ++ +Y+ G + S L G+ ++ AR+
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVM-EYVAGGEMFSHLRRIGRF-SEPHARF-Y 146
Query: 868 VLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927
+ YLH +++ D+K N+L+ + DFG A+ V G C
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 928 QRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
G+ Y+APE + + D ++ GV++ E+ G P P
Sbjct: 200 ------GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 89/218 (40%), Gaps = 36/218 (16%)
Query: 770 SANVIGTGSSGVV----YRVTIPNGETLAVKKMWSSDES-GAFSSEIQTLGSIRHKNIVR 824
S V+G G +G V +R T G+ A+K ++ S ++ Q G +IV
Sbjct: 33 SKQVLGLGVNGKVLECFHRRT---GQKCALKLLYDSPKARQEVDHHWQASGG---PHIVC 86
Query: 825 LLGWGSN----KNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH- 879
+L N K L+ + + G L S + G E++ + A+ +LH
Sbjct: 87 ILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS 146
Query: 880 HDCMPPILHGDVKAMNVLLGPGYQA---YLADFGLARIVSGSGDDNCSKTNQRPQLAGSY 936
H+ I H DVK N+L + L DFG A+ +T Q Y
Sbjct: 147 HN----IAHRDVKPENLLYTSKEKDAVLKLTDFGFAK-----------ETTQNALQTPCY 191
Query: 937 G--YMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972
Y+APE ++ + D++S GV++ +L G P
Sbjct: 192 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPF 229
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 23/213 (10%)
Query: 772 NVIGTGSSGVVYRVT-IPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
+GTGS G V V +G A+K K+ + +E + L ++ +V+L
Sbjct: 42 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 101
Query: 826 -LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
+ N NL ++ +Y+ G + S L G+ AR+ + YLH
Sbjct: 102 EFSFKDNSNLYMVM-EYVAGGEMFSHLRRIGRFXEP-HARF-YAAQIVLTFEYLHS---L 155
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+++ D+K N+L+ + DFG A+ V G C G+ Y+APE
Sbjct: 156 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----------GTPEYLAPEII 205
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
+ + D ++ GV++ E+ G P P
Sbjct: 206 LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 238
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 37.7 bits (86), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 23/213 (10%)
Query: 772 NVIGTGSSGVVYRVT-IPNGETLAVK-----KMWSSDESGAFSSEIQTLGSIRHKNIVRL 825
+GTGS G V V +G A+K K+ + +E + L ++ +V+L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 826 -LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMP 884
+ N NL ++ +Y+ G + S L G+ AR+ + YLH
Sbjct: 107 EFSFKDNSNLYMVM-EYVAGGEMFSHLRRIGRFXEP-HARF-YAAQIVLTFEYLHS---L 160
Query: 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA 944
+++ D+K N+L+ + DFG A+ V G C G+ Y+APE
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----------GTPEYLAPEII 210
Query: 945 SMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
+ + D ++ GV++ E+ G P P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 37.7 bits (86), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 92/223 (41%), Gaps = 25/223 (11%)
Query: 767 NLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLL 826
++ S+ +G+ + VV NG K + + A +IQ R ++ L
Sbjct: 55 DMNSSESVGSDAPCVVKVEPSDNGPLFTELKFY---QRAAKPEQIQKWIRTRK---LKYL 108
Query: 827 G----WGS---NKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVV---LGVAHALA 876
G WGS +KN K Y ++ S L + A +R V+ L + L
Sbjct: 109 GVPKYWGSGLHDKNGK--SYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILE 166
Query: 877 YLHHDCMPPILHGDVKAMNVLL---GPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
Y+H +HGD+KA N+LL P Q YL D+GLA G K + +
Sbjct: 167 YIHEH---EYVHGDIKASNLLLNYKNPD-QVYLVDYGLAYRYCPEGVHKEYKEDPKRCHD 222
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976
G+ + + + + + + D+ G +++ LTG P + L
Sbjct: 223 GTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNL 265
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 37.7 bits (86), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 17/170 (10%)
Query: 809 SEIQTLGSIRHKNIVRL-LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEV 867
+E + L ++ +V+L + N NL ++ +Y+ G + S L G+ ++ AR+
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVM-EYVAGGEMFSHLRRIGRF-SEPHARF-Y 146
Query: 868 VLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927
+ YLH +++ D+K N+L+ + DFG A+ V G C
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 928 QRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
G+ Y+APE + + D ++ GV++ E+ G P P
Sbjct: 200 ------GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEP 243
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 37.7 bits (86), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 69/183 (37%), Gaps = 55/183 (30%)
Query: 125 YRELTFIDLSGNSLWGEIPTEVCRLRKLESLYLNTNLLEGEIPSD--IGNLSSLAYLTLY 182
+ E T +D +G L EIP ++ L E L LN N L G I SD G L L L L
Sbjct: 7 HCEGTTVDCTGRGL-KEIPRDI-PLHTTE-LLLNDNEL-GRISSDGLFGRLPHLVKLELK 62
Query: 183 DNQLSGKIPKSIGALSKLQVFRAGGNQNLKGELPWEIGNCSNLVMLGLAETSISGNVPSS 242
NQL+G P + S +Q + G N+ I SN + LGL
Sbjct: 63 RNQLTGIEPNAFEGASHIQELQLGENK---------IKEISNKMFLGL------------ 101
Query: 243 IGMLERIQTIAIYTSLLSGPIPEEIGNCSELQNLYLYQNSISGPIPGRIGALSKLKSLLL 302
+L+ L LY N IS +PG L+ L SL L
Sbjct: 102 ----------------------------HQLKTLNLYDNQISCVMPGSFEHLNSLTSLNL 133
Query: 303 WQN 305
N
Sbjct: 134 ASN 136
Score = 32.7 bits (73), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Query: 301 LLWQNSLVGAIPDE--LGSCTELTVVDFSDNLLTGSIPRSFGNLLKLQELQLSVNQLSGT 358
LL ++ +G I + G L ++ N LTG P +F +QELQL N++
Sbjct: 34 LLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEI 93
Query: 359 IPIEIATCTALTHLEIDNNAISGEIPADIGNINGLT 394
L L + +N IS +P ++N LT
Sbjct: 94 SNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLT 129
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 41/98 (41%), Gaps = 3/98 (3%)
Query: 122 FGDYRELTFIDLSGNSLWGEIPTEVCRLRKLESLYLNTNLLEGEIPSDIG-NLSSLAYLT 180
FG L ++L N L G P ++ L L N ++ EI + + L L L
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIK-EISNKMFLGLHQLKTLN 108
Query: 181 LYDNQLSGKIPKSIGALSKLQVFRAGGNQ-NLKGELPW 217
LYDNQ+S +P S L+ L N N L W
Sbjct: 109 LYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAW 146
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 37.7 bits (86), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 886 ILHGDVKAMNVLLGPGYQA---YLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPE 942
LH D+K N L+G G +A Y+ DFGLA+ + + L G+ Y +
Sbjct: 124 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVN 183
Query: 943 -HASMQRITEKSDVYSFGVVLLEVLTGRHP 971
H +++ + + D+ S G VL+ L G P
Sbjct: 184 THLGIEQ-SRRDDLESLGYVLMYFLRGSLP 212
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 37.7 bits (86), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 92/223 (41%), Gaps = 25/223 (11%)
Query: 767 NLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLL 826
++ S+ +G+ + VV NG K + + A +IQ R ++ L
Sbjct: 55 DMNSSESVGSDAPCVVKVEPSDNGPLFTELKFY---QRAAKPEQIQKWIRTRK---LKYL 108
Query: 827 G----WGS---NKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVV---LGVAHALA 876
G WGS +KN K Y ++ S L + A +R V+ L + L
Sbjct: 109 GVPKYWGSGLHDKNGK--SYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILE 166
Query: 877 YLHHDCMPPILHGDVKAMNVLL---GPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933
Y+H +HGD+KA N+LL P Q YL D+GLA G K + +
Sbjct: 167 YIHEH---EYVHGDIKASNLLLNYKNPD-QVYLVDYGLAYRYCPEGVHKEYKEDPKRCHD 222
Query: 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976
G+ + + + + + + D+ G +++ LTG P + L
Sbjct: 223 GTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNL 265
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 72/170 (42%), Gaps = 17/170 (10%)
Query: 809 SEIQTLGSIRHKNIVRL-LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEV 867
+E + L ++ +V+L + N NL ++ +Y+ G + S L G+ AR+
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVM-EYVAGGEMFSHLRRIGRFXEP-HARF-Y 146
Query: 868 VLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927
+ YLH +++ D+K N+L+ + DFG A+ V G C
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 928 QRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
G+ Y+APE + + D ++ GV++ E+ G P P
Sbjct: 200 ------GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 74/170 (43%), Gaps = 17/170 (10%)
Query: 809 SEIQTLGSIRHKNIVRL-LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEV 867
+E + L ++ +V+L + N NL ++ +Y+ G + S L G+ ++ AR+
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVM-EYVAGGEMFSHLRRIGRF-SEPHARF-Y 146
Query: 868 VLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927
+ YLH +++ D+K N+++ + DFG A+ V G C
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 928 QRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
G+ Y+APE + + D ++ GV++ E+ G P P
Sbjct: 200 ------GTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 37.4 bits (85), Expect = 0.039, Method: Composition-based stats.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 28/211 (13%)
Query: 773 VIGTGSSGVVY----RVTIPNGETLAVKKMWSSD-ESGAFSSEIQTLGSIRHKNIVRLLG 827
++G GS G V R+T + K + + ++ E++ L + H NI++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH-HDCMPPI 886
+ + + + G L + + AR ++ V + Y+H H+ I
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR--IIKQVFSGITYMHKHN----I 142
Query: 887 LHGDVKAMNVLLGPGYQ---AYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEH 943
+H D+K N+LL + + DFGL+ T + ++ +Y Y+APE
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-------QNTKMKDRIGTAY-YIAPE- 193
Query: 944 ASMQRIT--EKSDVYSFGVVLLEVLTGRHPL 972
+ R T EK DV+S GV+L +L+G P
Sbjct: 194 --VLRGTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 37.4 bits (85), Expect = 0.039, Method: Composition-based stats.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 28/211 (13%)
Query: 773 VIGTGSSGVVY----RVTIPNGETLAVKKMWSSD-ESGAFSSEIQTLGSIRHKNIVRLLG 827
++G GS G V R+T + K + + ++ E++ L + H NI++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH-HDCMPPI 886
+ + + + G L + + AR ++ V + Y+H H+ I
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR--IIKQVFSGITYMHKHN----I 142
Query: 887 LHGDVKAMNVLLGPGYQ---AYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEH 943
+H D+K N+LL + + DFGL+ T + ++ +Y Y+APE
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-------QNTKMKDRIGTAY-YIAPE- 193
Query: 944 ASMQRIT--EKSDVYSFGVVLLEVLTGRHPL 972
+ R T EK DV+S GV+L +L+G P
Sbjct: 194 --VLRGTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 105/252 (41%), Gaps = 43/252 (17%)
Query: 759 FSIDDVVRNLTSANV-----IGTGSSGVVYRVTIPNGETL-----AVKKMWSSD------ 802
F++ +++ ++ +A IG G G +Y + + E++ V K+ SD
Sbjct: 23 FAVGEIITDMAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFT 82
Query: 803 -----ESGAFSSEIQTLGSIRHKNIVRLLG----WGS---NKNLKLLFYDYLPNGSLSSL 850
+ A +IQ IR + + + LG WGS +KN K Y ++ S
Sbjct: 83 ELKFYQRAAKPEQIQKW--IRTRKL-KYLGVPKYWGSGLHDKNGK--SYRFMIMDRFGSD 137
Query: 851 LHGAGKGGADWEARYEVV---LGVAHALAYLHHDCMPPILHGDVKAMNVLL---GPGYQA 904
L + A +R V+ L + L Y+H +HGD+KA N+LL P Q
Sbjct: 138 LQKIYEANAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNPD-QV 193
Query: 905 YLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLE 964
YL D+GLA G + + G+ + + + + + + D+ G +++
Sbjct: 194 YLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQ 253
Query: 965 VLTGRHPLDPTL 976
LTG P + L
Sbjct: 254 WLTGHLPWEDNL 265
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 8/131 (6%)
Query: 83 ISLKAVDLQGSLPSIFQPLKSLKRLIISSCNLTGTIPKEFGDYRELTFID---LSGNSLW 139
++L LQ +F L L L +++ N ++P G + LT +D L GN L
Sbjct: 64 LNLDYNQLQTLSAGVFDDLTELGTLGLAN-NQLASLP--LGVFDHLTQLDKLYLGGNQL- 119
Query: 140 GEIPTEVC-RLRKLESLYLNTNLLEGEIPSDIGNLSSLAYLTLYDNQLSGKIPKSIGALS 198
+P+ V RL KL+ L LNTN L+ L++L L+L NQL + L
Sbjct: 120 KSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLG 179
Query: 199 KLQVFRAGGNQ 209
KLQ GNQ
Sbjct: 180 KLQTITLFGNQ 190
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Query: 271 SELQNLYLYQNSISGPIPGRIGALSKLKSLLLWQNSLVGAIPDELGSCTELTVVDFSDNL 330
++L LYL N + G L+KLK L L N L T L + S N
Sbjct: 107 TQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQ 166
Query: 331 LTGSIPR-SFGNLLKLQELQLSVNQL 355
L S+P +F L KLQ + L NQ
Sbjct: 167 LQ-SVPHGAFDRLGKLQTITLFGNQF 191
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 72/170 (42%), Gaps = 17/170 (10%)
Query: 809 SEIQTLGSIRHKNIVRL-LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEV 867
+E + L ++ +V+L + N NL ++ +Y+ G + S L G+ AR+
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVM-EYVAGGEMFSHLRRIGRFXEP-HARF-Y 146
Query: 868 VLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927
+ YLH +++ D+K N+L+ + DFG A+ V G C
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 928 QRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
G+ Y+APE + + D ++ GV++ E+ G P P
Sbjct: 200 ------GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 809 SEIQTLGSIRHKNIVRL-LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEV 867
+E + L ++ +V+L + N NL ++ +Y+ G + S L G+ ++ AR+
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVM-EYVAGGEMFSHLRRIGRF-SEPHARF-Y 146
Query: 868 VLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927
+ YLH +++ D+K N+L+ + DFG A+ V G
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---------- 193
Query: 928 QRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
+ L G+ Y+APE + + D ++ GV++ E+ G P P
Sbjct: 194 RTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Query: 324 VDFSDNLLTGSIPRSFGNLLKLQELQLSVNQLSGTIPI-EIAT-CTALTHLEIDNNAIS- 380
+DFS+NLLT ++ + G+L +L+ L L +NQL I E+ T +L L+I N++S
Sbjct: 329 LDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSY 388
Query: 381 GEIPADIGNINGLTLFFAWKNKLTGNIPESLSQCQELQALDFSYNNLSGPIPKEI 435
E D L N LT I L ++ LD N + IPK++
Sbjct: 389 DEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIKS-IPKQV 440
Score = 33.1 bits (74), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 67/160 (41%), Gaps = 11/160 (6%)
Query: 203 FRAGGNQNLKGELPWEIGNCSNLVMLGLAETSISGNVPSSIGMLERIQTIAIYTSLLS-- 260
F G + + P +I S + L + ++ V + G L ++T+ + + L
Sbjct: 307 FTVSGTRMVHMLCPSKI---SPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKEL 363
Query: 261 GPIPEEIGNCSELQNLYLYQNSISGPIPGRIGALSKLKSLLLWQNSLVGAIPDELGSCT- 319
I E LQ L + QNS+S + G S KSLL S + D + C
Sbjct: 364 SKIAEMTTQMKSLQQLDISQNSVS--YDEKKGDCSWTKSLLSLNMS-SNILTDTIFRCLP 420
Query: 320 -ELTVVDFSDNLLTGSIPRSFGNLLKLQELQLSVNQLSGT 358
+ V+D N + SIP+ L LQEL ++ NQL
Sbjct: 421 PRIKVLDLHSNKI-KSIPKQVVKLEALQELNVASNQLKSV 459
Score = 30.0 bits (66), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 66/157 (42%), Gaps = 13/157 (8%)
Query: 155 LYLNTNLLEGEIPSDIGNLSSLAYLTLYDNQLS--GKIPKSIGALSKLQVFRAGGN---- 208
L + NLL + + G+L+ L L L NQL KI + + LQ N
Sbjct: 329 LDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSY 388
Query: 209 QNLKGELPWEIGNCSNLVMLGLAETSISGNVPSSIGMLERIQTIAIYTSLLSGPIPEEIG 268
KG+ W +L+ L ++ ++ + + RI+ + ++++ + IP+++
Sbjct: 389 DEKKGDCSWT----KSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIKS-IPKQVV 441
Query: 269 NCSELQNLYLYQNSISGPIPGRIGALSKLKSLLLWQN 305
LQ L + N + G L+ L+ + L N
Sbjct: 442 KLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTN 478
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 8/131 (6%)
Query: 83 ISLKAVDLQGSLPSIFQPLKSLKRLIISSCNLTGTIPKEFGDYRELTFID---LSGNSLW 139
++L LQ +F L L L +++ N ++P G + LT +D L GN L
Sbjct: 64 LNLDYNQLQTLSAGVFDDLTELGTLGLAN-NQLASLP--LGVFDHLTQLDKLYLGGNQL- 119
Query: 140 GEIPTEVC-RLRKLESLYLNTNLLEGEIPSDIGNLSSLAYLTLYDNQLSGKIPKSIGALS 198
+P+ V RL KL+ L LNTN L+ L++L L+L NQL + L
Sbjct: 120 KSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLG 179
Query: 199 KLQVFRAGGNQ 209
KLQ GNQ
Sbjct: 180 KLQTITLFGNQ 190
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Query: 271 SELQNLYLYQNSISGPIPGRIGALSKLKSLLLWQNSLVGAIPDELGSCTELTVVDFSDNL 330
++L LYL N + G L+KLK L L N L T L + S N
Sbjct: 107 TQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQ 166
Query: 331 LTGSIPR-SFGNLLKLQELQLSVNQL 355
L S+P +F L KLQ + L NQ
Sbjct: 167 LQ-SVPHGAFDRLGKLQTITLFGNQF 191
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 37.4 bits (85), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 92/239 (38%), Gaps = 44/239 (18%)
Query: 481 SEMGNLKHLNFVDMSENHLVGGIPPSVVGCQSLEFLDLHSNGLTG-----SVPDTLPTSL 535
S L + ++D+ +NH+ + + L+ LDL N LT S+PD +
Sbjct: 332 SNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGN 391
Query: 536 QLVDLSDNRLSGSLAHSIGSLTEXXXXXXXXNQLSGRIPAEILSCRKLILLDIGNNRFSG 595
+LV L L+ +L H L+E R+P L +L + NRFS
Sbjct: 392 KLVTLPKINLTANLIH----LSENRLENLDILYFLLRVP-------HLQILILNQNRFSS 440
Query: 596 ----EIPKELGQXXXXXXXXXXXXXQFSGEIPSE-FSGLTKLGILDLSHNKLS----GDL 646
+ P E + E+ + F GL+ L +L L+HN L+ G
Sbjct: 441 CSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVF 500
Query: 647 DALASLQNLVSLN------VSFNDFSGEL------------PNTPFFRKLPLSDLASNR 687
L +L+ L SLN +S ND L PN F L + D+ N+
Sbjct: 501 SHLTALRGL-SLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDITHNK 558
>pdb|2V9S|A Chain A, Second Lrr Domain Of Human Slit2
pdb|2V9S|B Chain B, Second Lrr Domain Of Human Slit2
pdb|2V9S|C Chain C, Second Lrr Domain Of Human Slit2
pdb|2V9S|D Chain D, Second Lrr Domain Of Human Slit2
Length = 220
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 2/130 (1%)
Query: 80 VVEISLKAVDLQGSLPSIFQPLKSLKRLIISSCNLTGTIPKEFGDYRELTFIDLSGNSLW 139
+ EI L+ ++ P F P K L+R+ +S+ ++ P F R L + L GN +
Sbjct: 34 ITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI- 92
Query: 140 GEIPTEVCR-LRKLESLYLNTNLLEGEIPSDIGNLSSLAYLTLYDNQLSGKIPKSIGALS 198
E+P + L L+ L LN N + +L +L L+LYDN+L + L
Sbjct: 93 TELPKSLFEGLFSLQLLLLNANKINXLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLR 152
Query: 199 KLQVFRAGGN 208
+Q N
Sbjct: 153 AIQTMHLAQN 162
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 23/173 (13%)
Query: 809 SEIQTLGSIRHKNIVRL-LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARY-- 865
+E + L ++ +V+L + N NL ++ +Y+ G + S L G+ + AR+
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVM-EYVAGGEMFSHLRRIGRF-XEPHARFYA 168
Query: 866 -EVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924
++VL YLH +++ D+K N+L+ + DFG A+ V G C
Sbjct: 169 AQIVL----TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC- 220
Query: 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
G+ Y+APE + + D ++ GV++ E+ G P P
Sbjct: 221 ---------GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 37.0 bits (84), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 102/246 (41%), Gaps = 36/246 (14%)
Query: 61 PAETSPCKWFGIHCSSNGEVVEISLKAVDLQGSLPSI-----FQPLKSLKRLIISSCNLT 115
P T+ C G+ G + S + + L G+ S FQ ++L L + S L
Sbjct: 11 PKVTTSCPQQGLQAVPTG--IPASSQRIFLHGNRISYVPAASFQSCRNLTILWLHSNALA 68
Query: 116 GTIPKEFGDYRELTFIDLSGNSLWGEI-PTEVCRLRKLESLYLNTNLLEGEIPSDIGNLS 174
G F L +DLS N+ + PT L L +L+L+ L+ P L+
Sbjct: 69 GIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLA 128
Query: 175 SLAYLTLYDNQLSGKIPKSIGALSKLQVFRAGGNQNLKGELPWEIGNCSNLVMLGLAETS 234
+L YL L DN L +P + FR ++GN ++L + G S
Sbjct: 129 ALQYLYLQDNNLQA-LPDN--------TFR-------------DLGNLTHLFLHGNRIPS 166
Query: 235 ISGNVPSSIGMLERIQTIAIYTSLLSGPIPEEIGNCSELQNLYLYQNSISGPIPGRIGAL 294
+ + + L+R + ++ + ++ P + L LYL+ N++S +P + L
Sbjct: 167 VPEHAFRGLHSLDR---LLLHQNHVARVHPHAFRDLGRLMTLYLFANNLSM-LPAEV--L 220
Query: 295 SKLKSL 300
L+SL
Sbjct: 221 VPLRSL 226
Score = 30.4 bits (67), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 94/268 (35%), Gaps = 41/268 (15%)
Query: 153 ESLYLNTNLLEGEIPSDIGNLSSLAYLTLYDNQLSGKIPKSIGALSKLQVFRAGGNQNLK 212
+ ++L+ N + + + +L L L+ N L+G + L+ L+ N L+
Sbjct: 34 QRIFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLR 93
Query: 213 GELPWEIGNCSNLVMLGLAETSISGNVPSSIGMLERIQTIAIYTSLLSGPIPEEIGNCSE 272
P +L L L + P L +Q + + + L +
Sbjct: 94 VVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGN 153
Query: 273 LQNLYLYQNSISGPIPGRIGALSKLKSLLLWQNSLVGAIPDELGSCTELTVVDFSDNLLT 332
L +L+L+ N I L L LLL QN +
Sbjct: 154 LTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARV---------------------- 191
Query: 333 GSIPRSFGNLLKLQELQLSVNQLSGTIPIEI-ATCTALTHLEIDNNAISGEIPADIGNIN 391
P +F +L +L L L N LS +P E+ +L +L +++N + A
Sbjct: 192 --HPHAFRDLGRLMTLYLFANNLS-MLPAEVLVPLRSLQYLRLNDNPWVCDCRARP---- 244
Query: 392 GLTLFFAWKNKLTG-------NIPESLS 412
+AW K G N+P+ L+
Sbjct: 245 ----LWAWLQKFRGSSSEVPCNLPQRLA 268
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 37.0 bits (84), Expect = 0.054, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 271 SELQNLYLYQNSISGPIPGRIGALSKLKSLLLWQNSLVGAIPDELGSCTELTVVDFSDNL 330
++ Q L+L N I+ PG L L+ L N L T+LT +D +DN
Sbjct: 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92
Query: 331 LTGSIPR-SFGNLLKLQELQLSVN 353
L SIPR +F NL L + L N
Sbjct: 93 LK-SIPRGAFDNLKSLTHIYLYNN 115
Score = 32.7 bits (73), Expect = 0.91, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 298 KSLLLWQNSLVGAIPDELGSCTELTVVDFSDNLLTGSIPRSFGNLLKLQELQLSVNQLSG 357
++L+ QN + ++P G T+ + ++N +T P F +L+ LQ+L + N+L+
Sbjct: 14 QTLVNCQNIRLASVP--AGIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTA 71
Query: 358 TIPIEIATCTALTHLEIDNNAISGEIPADIGNINGLTLFFAWKN 401
T LT L++++N + N+ LT + + N
Sbjct: 72 IPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNN 115
>pdb|2V9T|B Chain B, Complex Between The Second Lrr Domain Of Slit2 And The
First Ig Domain From Robo1
Length = 220
Score = 37.0 bits (84), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 2/130 (1%)
Query: 80 VVEISLKAVDLQGSLPSIFQPLKSLKRLIISSCNLTGTIPKEFGDYRELTFIDLSGNSLW 139
+ EI L+ ++ P F P K L+R+ +S+ ++ P F R L + L GN +
Sbjct: 34 ITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI- 92
Query: 140 GEIPTEVCR-LRKLESLYLNTNLLEGEIPSDIGNLSSLAYLTLYDNQLSGKIPKSIGALS 198
E+P + L L+ L LN N + +L +L L+LYDN+L + L
Sbjct: 93 TELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLR 152
Query: 199 KLQVFRAGGN 208
+Q N
Sbjct: 153 AIQTMHLAQN 162
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 37.0 bits (84), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 72/169 (42%), Gaps = 35/169 (20%)
Query: 763 DVVRNLTSANVIGTGSSGVVYRV--TIPNGETLAVKKMWSSDES----GAFSSEIQTLGS 816
D R +T +G G+ G VY+ T+ N ET+A+K++ E G E+ L
Sbjct: 34 DRYRRITK---LGEGTYGEVYKAIDTVTN-ETVAIKRIRLEHEEEGVPGTAIREVSLLKE 89
Query: 817 IRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEAR------YEVVLG 870
++H+NI+ L + + L ++Y N L D R Y+++ G
Sbjct: 90 LQHRNIIELKSVIHHNHRLHLIFEYAEND-----LKKYMDKNPDVSMRVIKSFLYQLING 144
Query: 871 VAHALAYLH-HDCMPPILHGDVKAMNVLLGPGYQA-----YLADFGLAR 913
V + H C LH D+K N+LL + + DFGLAR
Sbjct: 145 V----NFCHSRRC----LHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|3G3B|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
Length = 170
Score = 37.0 bits (84), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 274 QNLYLYQNSISGPIPGRIGALSKLKSLLLWQNSLVGAIPDELGSCTELTVVDFSDNLLTG 333
Q LYLY N I+ PG L++L L L N L T+LT + +DN L
Sbjct: 33 QVLYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQL-K 91
Query: 334 SIPR-SFGNLLKLQELQL 350
SIPR +F NL L + L
Sbjct: 92 SIPRGAFDNLRSLTHIWL 109
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%)
Query: 292 GALSKLKSLLLWQNSLVGAIPDELGSCTELTVVDFSDNLLTGSIPRSFGNLLKLQELQLS 351
G + + L L+ N + P T+LT +D +N LT F L +L +L L+
Sbjct: 27 GIPTTTQVLYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86
Query: 352 VNQLSGTIPIEIATCTALTHLEIDNN 377
NQL +LTH+ + NN
Sbjct: 87 DNQLKSIPRGAFDNLRSLTHIWLLNN 112
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 36.6 bits (83), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 74/170 (43%), Gaps = 17/170 (10%)
Query: 809 SEIQTLGSIRHKNIVRL-LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEV 867
+E + L ++ +V+L + N NL ++ +Y+ G + S L G+ ++ AR+
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVM-EYVAGGEMFSHLRRIGRF-SEPHARF-Y 146
Query: 868 VLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927
+ YLH +++ D+K N+L+ + DFG A+ V G C
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 928 QRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977
G+ Y+APE + + D ++ GV++ ++ G P P
Sbjct: 200 ------GTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQP 243
>pdb|3G3A|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
Length = 178
Score = 36.6 bits (83), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 274 QNLYLYQNSISGPIPGRIGALSKLKSLLLWQNSLVGAIPDELGSCTELTVVDFSDNLLTG 333
Q LYLY N I+ PG L++L L L N L T+LT + +DN L
Sbjct: 41 QVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQL-K 99
Query: 334 SIPR-SFGNLLKLQELQL 350
SIPR +F NL L + L
Sbjct: 100 SIPRGAFDNLKSLTHIWL 117
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%)
Query: 292 GALSKLKSLLLWQNSLVGAIPDELGSCTELTVVDFSDNLLTGSIPRSFGNLLKLQELQLS 351
G + + L L+ N + P T+LT +D +N LT F L +L +L L+
Sbjct: 35 GIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 94
Query: 352 VNQLSGTIPIEIATCTALTHLEIDNN 377
NQL +LTH+ + NN
Sbjct: 95 DNQLKSIPRGAFDNLKSLTHIWLLNN 120
>pdb|3G39|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor
Length = 170
Score = 36.6 bits (83), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 274 QNLYLYQNSISGPIPGRIGALSKLKSLLLWQNSLVGAIPDELGSCTELTVVDFSDNLLTG 333
Q LYLY N I+ PG L++L L L N L T+LT + +DN L
Sbjct: 33 QVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQL-K 91
Query: 334 SIPR-SFGNLLKLQELQL 350
SIPR +F NL L + L
Sbjct: 92 SIPRGAFDNLKSLTHIWL 109
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%)
Query: 292 GALSKLKSLLLWQNSLVGAIPDELGSCTELTVVDFSDNLLTGSIPRSFGNLLKLQELQLS 351
G + + L L+ N + P T+LT +D +N LT F L +L +L L+
Sbjct: 27 GIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86
Query: 352 VNQLSGTIPIEIATCTALTHLEIDNN 377
NQL +LTH+ + NN
Sbjct: 87 DNQLKSIPRGAFDNLKSLTHIWLLNN 112
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.135 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,944,896
Number of Sequences: 62578
Number of extensions: 1141928
Number of successful extensions: 5268
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 557
Number of HSP's that attempted gapping in prelim test: 2813
Number of HSP's gapped (non-prelim): 1502
length of query: 1001
length of database: 14,973,337
effective HSP length: 108
effective length of query: 893
effective length of database: 8,214,913
effective search space: 7335917309
effective search space used: 7335917309
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)