Query 001873
Match_columns 1001
No_of_seqs 983 out of 6419
Neff 9.2
Searched_HMMs 46136
Date Thu Mar 28 11:18:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001873.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001873hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 2E-113 4E-118 1098.3 63.8 857 35-988 27-894 (968)
2 PLN00113 leucine-rich repeat r 100.0 1.7E-62 3.6E-67 628.3 32.4 512 103-689 70-584 (968)
3 KOG0472 Leucine-rich repeat pr 100.0 4.3E-48 9.3E-53 399.8 -11.2 484 151-666 46-541 (565)
4 KOG0595 Serine/threonine-prote 100.0 1.7E-43 3.6E-48 370.0 16.4 200 764-976 8-218 (429)
5 KOG0472 Leucine-rich repeat pr 100.0 3E-47 6.6E-52 393.5 -12.6 485 104-644 47-542 (565)
6 KOG0581 Mitogen-activated prot 100.0 3.8E-41 8.2E-46 350.0 17.3 211 767-993 80-295 (364)
7 KOG1187 Serine/threonine prote 100.0 8.9E-41 1.9E-45 370.9 21.4 222 762-990 71-297 (361)
8 KOG4194 Membrane glycoprotein 100.0 7.5E-42 1.6E-46 368.2 5.3 424 257-690 70-498 (873)
9 KOG0192 Tyrosine kinase specif 100.0 5.7E-40 1.2E-44 361.1 19.8 200 768-977 43-251 (362)
10 KOG0615 Serine/threonine prote 100.0 1.4E-40 3E-45 347.0 12.1 200 764-976 170-385 (475)
11 KOG0575 Polo-like serine/threo 100.0 1.1E-39 2.4E-44 358.2 19.5 198 766-975 18-221 (592)
12 KOG0598 Ribosomal protein S6 k 100.0 1.1E-39 2.3E-44 339.3 17.3 200 765-976 24-229 (357)
13 KOG0591 NIMA (never in mitosis 100.0 6.8E-41 1.5E-45 331.9 4.3 203 765-975 18-231 (375)
14 KOG0593 Predicted protein kina 100.0 6.8E-40 1.5E-44 328.1 10.6 218 766-999 2-225 (396)
15 KOG0659 Cdk activating kinase 100.0 5.4E-39 1.2E-43 316.9 15.6 217 766-998 2-224 (318)
16 KOG0616 cAMP-dependent protein 100.0 8E-39 1.7E-43 320.2 16.5 198 765-977 43-246 (355)
17 KOG4194 Membrane glycoprotein 100.0 4.5E-40 9.7E-45 354.5 6.0 301 265-609 143-443 (873)
18 KOG0600 Cdc2-related protein k 100.0 1.6E-38 3.4E-43 339.9 15.5 219 765-998 116-342 (560)
19 KOG0618 Serine/threonine phosp 100.0 8.1E-41 1.8E-45 379.5 -2.2 503 107-663 3-510 (1081)
20 KOG0197 Tyrosine kinases [Sign 100.0 1.6E-38 3.4E-43 346.5 14.8 201 767-976 207-409 (468)
21 KOG0592 3-phosphoinositide-dep 100.0 4.7E-38 1E-42 338.9 16.7 206 766-976 73-291 (604)
22 KOG0661 MAPK related serine/th 100.0 5.9E-39 1.3E-43 340.6 9.2 216 762-994 6-228 (538)
23 KOG3653 Transforming growth fa 100.0 1.6E-37 3.4E-42 329.5 17.6 200 765-974 209-426 (534)
24 KOG0597 Serine-threonine prote 100.0 2.1E-38 4.6E-43 340.6 11.1 196 766-974 2-202 (808)
25 KOG0663 Protein kinase PITSLRE 100.0 3E-37 6.6E-42 313.3 15.3 218 764-997 74-299 (419)
26 KOG2052 Activin A type IB rece 100.0 6.4E-37 1.4E-41 322.4 17.3 224 762-992 207-456 (513)
27 KOG0605 NDR and related serine 100.0 2.7E-36 5.8E-41 326.1 19.0 218 765-987 140-405 (550)
28 KOG0618 Serine/threonine phosp 100.0 1.2E-38 2.6E-43 361.9 -0.6 480 130-664 2-487 (1081)
29 KOG0660 Mitogen-activated prot 100.0 6.9E-37 1.5E-41 316.9 12.1 222 764-1000 20-252 (359)
30 KOG0582 Ste20-like serine/thre 100.0 3.6E-36 7.9E-41 317.0 17.6 209 765-979 25-239 (516)
31 KOG0658 Glycogen synthase kina 100.0 8.1E-37 1.8E-41 316.9 11.3 217 766-1000 24-250 (364)
32 KOG0583 Serine/threonine prote 100.0 8.9E-36 1.9E-40 331.5 19.9 200 764-975 15-226 (370)
33 KOG0594 Protein kinase PCTAIRE 100.0 9.1E-36 2E-40 310.5 16.8 217 765-996 10-241 (323)
34 KOG0578 p21-activated serine/t 100.0 3.2E-36 6.9E-41 328.4 13.8 200 762-974 269-471 (550)
35 KOG0193 Serine/threonine prote 100.0 2.3E-36 5E-41 329.7 12.5 196 766-973 392-594 (678)
36 KOG0198 MEKK and related serin 100.0 8.1E-36 1.8E-40 317.6 14.9 202 766-975 17-225 (313)
37 KOG4721 Serine/threonine prote 100.0 5.9E-36 1.3E-40 321.3 13.3 185 771-974 129-313 (904)
38 KOG0444 Cytoskeletal regulator 100.0 8.2E-38 1.8E-42 338.2 -1.5 368 276-674 12-383 (1255)
39 KOG0611 Predicted serine/threo 100.0 6.6E-36 1.4E-40 309.0 11.8 199 764-975 51-256 (668)
40 KOG1026 Nerve growth factor re 100.0 7.1E-36 1.5E-40 341.1 13.2 203 766-976 486-710 (774)
41 KOG0444 Cytoskeletal regulator 100.0 1.8E-37 3.8E-42 335.7 -0.1 368 123-500 4-375 (1255)
42 KOG0196 Tyrosine kinase, EPH ( 100.0 6.1E-36 1.3E-40 333.3 9.3 220 767-996 630-857 (996)
43 KOG0588 Serine/threonine prote 100.0 4.4E-35 9.6E-40 322.1 15.2 198 765-975 11-215 (786)
44 KOG0580 Serine/threonine prote 100.0 1.4E-35 3E-40 288.8 9.4 199 766-976 22-226 (281)
45 KOG0694 Serine/threonine prote 100.0 5.4E-35 1.2E-39 324.7 15.5 201 765-978 367-574 (694)
46 KOG0585 Ca2+/calmodulin-depend 100.0 8.5E-35 1.8E-39 308.3 15.3 206 763-975 94-322 (576)
47 cd05628 STKc_NDR1 Catalytic do 100.0 2.9E-34 6.2E-39 326.1 20.0 206 766-976 1-240 (363)
48 cd05631 STKc_GRK4 Catalytic do 100.0 1.2E-33 2.5E-38 310.2 20.8 198 768-976 2-205 (285)
49 KOG1094 Discoidin domain recep 100.0 3.5E-34 7.5E-39 309.4 15.9 204 766-977 538-746 (807)
50 KOG0589 Serine/threonine prote 100.0 1E-34 2.2E-39 316.1 11.9 201 765-975 3-209 (426)
51 KOG0667 Dual-specificity tyros 100.0 2.9E-34 6.3E-39 319.6 15.5 217 765-999 185-411 (586)
52 cd05599 STKc_NDR_like Catalyti 100.0 7E-34 1.5E-38 323.6 17.8 206 766-976 1-243 (364)
53 cd05612 STKc_PRKX_like Catalyt 100.0 6.2E-34 1.3E-38 313.3 16.7 196 766-976 1-202 (291)
54 KOG0610 Putative serine/threon 100.0 9.2E-34 2E-38 296.8 17.0 209 765-976 76-339 (459)
55 cd05629 STKc_NDR_like_fungal C 100.0 7.7E-34 1.7E-38 324.5 18.1 206 766-976 1-252 (377)
56 cd05626 STKc_LATS2 Catalytic d 100.0 1.1E-33 2.5E-38 323.3 19.3 205 767-976 2-252 (381)
57 PTZ00426 cAMP-dependent protei 100.0 9.2E-34 2E-38 318.0 18.1 197 765-976 29-232 (340)
58 cd05625 STKc_LATS1 Catalytic d 100.0 1.1E-33 2.5E-38 323.7 18.6 205 767-976 2-252 (382)
59 PTZ00263 protein kinase A cata 100.0 1E-33 2.2E-38 317.0 17.7 196 765-975 17-218 (329)
60 cd05598 STKc_LATS Catalytic do 100.0 1.2E-33 2.6E-38 322.9 17.7 206 767-977 2-249 (376)
61 cd05571 STKc_PKB Catalytic dom 100.0 2.3E-33 5E-38 313.4 18.8 192 772-975 1-198 (323)
62 cd05621 STKc_ROCK2 Catalytic d 100.0 2.4E-33 5.3E-38 318.2 18.8 199 765-975 42-250 (370)
63 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.8E-33 3.9E-38 316.0 17.4 196 766-976 1-202 (333)
64 KOG0194 Protein tyrosine kinas 100.0 6E-34 1.3E-38 316.4 12.4 205 769-986 160-375 (474)
65 cd05627 STKc_NDR2 Catalytic do 100.0 2.5E-33 5.4E-38 318.2 17.5 207 766-977 1-241 (360)
66 cd05102 PTKc_VEGFR3 Catalytic 100.0 5.3E-33 1.1E-37 313.1 20.0 203 766-976 7-281 (338)
67 cd05595 STKc_PKB_beta Catalyti 100.0 6.9E-33 1.5E-37 309.5 20.5 192 772-975 1-198 (323)
68 KOG1095 Protein tyrosine kinas 100.0 3.3E-33 7.1E-38 331.1 18.1 203 766-976 692-909 (1025)
69 KOG0201 Serine/threonine prote 100.0 2.5E-34 5.5E-39 303.4 7.2 200 766-977 13-216 (467)
70 cd05593 STKc_PKB_gamma Catalyt 100.0 9.3E-33 2E-37 309.0 20.2 192 772-975 1-198 (328)
71 cd05585 STKc_YPK1_like Catalyt 100.0 8.6E-33 1.9E-37 307.4 19.0 190 774-975 1-196 (312)
72 cd05622 STKc_ROCK1 Catalytic d 100.0 8.1E-33 1.8E-37 314.2 19.0 199 765-975 42-250 (371)
73 cd05596 STKc_ROCK Catalytic do 100.0 9.9E-33 2.1E-37 313.6 19.2 200 765-976 42-251 (370)
74 KOG4250 TANK binding protein k 100.0 2.2E-33 4.9E-38 312.6 13.3 200 768-978 15-230 (732)
75 KOG0607 MAP kinase-interacting 100.0 2.4E-33 5.1E-38 282.5 12.0 199 772-975 84-294 (463)
76 cd05587 STKc_cPKC Catalytic do 100.0 2.1E-32 4.5E-37 306.0 20.6 198 767-976 1-205 (324)
77 cd05573 STKc_ROCK_NDR_like Cat 100.0 5.6E-33 1.2E-37 314.6 16.2 206 766-976 1-234 (350)
78 cd05584 STKc_p70S6K Catalytic 100.0 1.8E-32 3.9E-37 306.2 19.8 192 772-975 2-203 (323)
79 cd05597 STKc_DMPK_like Catalyt 100.0 1.5E-32 3.2E-37 307.9 19.0 200 766-975 1-211 (331)
80 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2.3E-32 5.1E-37 300.4 20.2 199 766-976 5-208 (288)
81 cd05589 STKc_PKN Catalytic dom 100.0 2.2E-32 4.8E-37 305.8 20.1 196 768-976 1-205 (324)
82 cd05624 STKc_MRCK_beta Catalyt 100.0 1.2E-32 2.6E-37 308.6 17.9 200 766-975 1-211 (331)
83 cd05616 STKc_cPKC_beta Catalyt 100.0 2.5E-32 5.5E-37 305.2 20.3 198 767-976 1-205 (323)
84 cd07869 STKc_PFTAIRE1 Catalyti 100.0 3.2E-32 6.9E-37 301.7 20.9 198 766-975 5-207 (303)
85 cd05588 STKc_aPKC Catalytic do 100.0 2.6E-32 5.7E-37 305.6 20.2 191 772-974 1-198 (329)
86 cd05592 STKc_nPKC_theta_delta 100.0 3.1E-32 6.6E-37 303.3 20.4 192 772-975 1-199 (316)
87 KOG0574 STE20-like serine/thre 100.0 1.6E-34 3.5E-39 288.0 1.7 197 768-975 35-232 (502)
88 cd07848 STKc_CDKL5 Catalytic d 100.0 2E-32 4.3E-37 301.0 18.5 198 767-975 2-204 (287)
89 cd05590 STKc_nPKC_eta Catalyti 100.0 2.8E-32 6E-37 304.2 19.7 193 772-976 1-200 (320)
90 cd06649 PKc_MEK2 Catalytic dom 100.0 4E-32 8.8E-37 304.5 21.1 197 766-975 5-205 (331)
91 KOG0032 Ca2+/calmodulin-depend 100.0 1.8E-32 3.9E-37 304.5 17.9 201 762-976 31-242 (382)
92 cd05594 STKc_PKB_alpha Catalyt 100.0 1.6E-32 3.5E-37 307.1 17.7 192 772-975 1-199 (325)
93 KOG0033 Ca2+/calmodulin-depend 100.0 3.5E-34 7.5E-39 278.5 3.5 197 765-974 10-214 (355)
94 cd05605 STKc_GRK4_like Catalyt 100.0 3.8E-32 8.3E-37 298.2 20.1 198 767-975 1-204 (285)
95 cd05614 STKc_MSK2_N N-terminal 100.0 2.3E-32 5.1E-37 306.9 18.8 198 767-975 1-210 (332)
96 KOG0986 G protein-coupled rece 100.0 3.8E-33 8.2E-38 293.7 11.2 213 766-993 185-403 (591)
97 KOG0599 Phosphorylase kinase g 100.0 2.9E-33 6.3E-38 276.0 9.5 201 762-975 13-231 (411)
98 cd05618 STKc_aPKC_iota Catalyt 100.0 3.7E-32 8E-37 304.3 19.8 191 772-974 1-198 (329)
99 cd05591 STKc_nPKC_epsilon Cata 100.0 2.9E-32 6.3E-37 304.4 18.9 193 772-976 1-200 (321)
100 cd05623 STKc_MRCK_alpha Cataly 100.0 3.3E-32 7.2E-37 305.4 19.1 200 766-975 1-211 (332)
101 PRK13184 pknD serine/threonine 100.0 4.3E-32 9.2E-37 324.8 20.9 207 766-975 2-234 (932)
102 cd05620 STKc_nPKC_delta Cataly 100.0 5E-32 1.1E-36 301.6 20.1 192 772-975 1-199 (316)
103 cd05615 STKc_cPKC_alpha Cataly 100.0 4.7E-32 1E-36 302.7 19.9 197 768-976 2-205 (323)
104 cd05617 STKc_aPKC_zeta Catalyt 100.0 5.8E-32 1.3E-36 302.6 20.1 192 772-975 1-199 (327)
105 cd05619 STKc_nPKC_theta Cataly 100.0 6E-32 1.3E-36 300.7 20.0 192 772-975 1-199 (316)
106 cd05575 STKc_SGK Catalytic dom 100.0 5.3E-32 1.1E-36 302.6 19.2 192 772-975 1-199 (323)
107 KOG1989 ARK protein kinase fam 100.0 6.7E-33 1.5E-37 318.7 12.1 209 766-975 37-261 (738)
108 cd07862 STKc_CDK6 Catalytic do 100.0 8E-32 1.7E-36 296.7 20.2 199 766-976 1-213 (290)
109 cd06650 PKc_MEK1 Catalytic dom 100.0 7.5E-32 1.6E-36 302.3 20.3 197 766-975 5-205 (333)
110 cd05601 STKc_CRIK Catalytic do 100.0 1.5E-32 3.2E-37 308.3 14.5 201 766-976 1-213 (330)
111 cd05608 STKc_GRK1 Catalytic do 100.0 7.4E-32 1.6E-36 295.1 19.3 192 774-975 1-200 (280)
112 cd05603 STKc_SGK2 Catalytic do 100.0 7E-32 1.5E-36 301.4 19.0 192 772-975 1-199 (321)
113 PHA03212 serine/threonine kina 100.0 7.6E-32 1.7E-36 307.5 19.6 193 766-974 92-285 (391)
114 PTZ00267 NIMA-related protein 100.0 1.1E-31 2.3E-36 315.0 21.4 202 766-975 67-274 (478)
115 cd05604 STKc_SGK3 Catalytic do 100.0 4.8E-32 1E-36 303.2 17.6 192 772-975 1-199 (325)
116 PHA02988 hypothetical protein; 100.0 1.4E-31 3E-36 293.1 20.5 190 772-976 26-226 (283)
117 cd05602 STKc_SGK1 Catalytic do 100.0 8.2E-32 1.8E-36 301.4 19.2 192 772-975 1-199 (325)
118 cd05096 PTKc_DDR1 Catalytic do 100.0 1.1E-31 2.4E-36 297.6 20.1 202 766-975 5-245 (304)
119 cd07859 STKc_TDY_MAPK_plant Ca 100.0 9.4E-32 2E-36 303.1 19.5 199 767-975 1-211 (338)
120 cd05106 PTKc_CSF-1R Catalytic 100.0 9.6E-32 2.1E-36 305.8 18.8 203 766-976 38-319 (374)
121 PLN00034 mitogen-activated pro 100.0 1.1E-31 2.4E-36 303.9 19.0 193 766-974 74-275 (353)
122 cd05607 STKc_GRK7 Catalytic do 100.0 2.2E-31 4.7E-36 290.9 20.7 191 774-975 1-197 (277)
123 cd05582 STKc_RSK_N N-terminal 100.0 3.9E-32 8.5E-37 303.0 15.0 192 772-975 2-201 (318)
124 cd05570 STKc_PKC Catalytic dom 100.0 1.6E-31 3.5E-36 297.8 19.9 192 772-975 1-199 (318)
125 cd07876 STKc_JNK2 Catalytic do 100.0 1.6E-31 3.4E-36 303.5 19.9 208 763-990 18-236 (359)
126 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.6E-31 3.5E-36 290.2 18.9 201 766-976 5-213 (266)
127 KOG4717 Serine/threonine prote 100.0 4.4E-32 9.6E-37 288.3 13.7 202 763-976 15-223 (864)
128 cd05104 PTKc_Kit Catalytic dom 100.0 1.8E-31 4E-36 303.8 19.9 204 765-976 34-321 (375)
129 KOG0666 Cyclin C-dependent kin 100.0 1.7E-32 3.7E-37 275.6 9.7 227 764-998 22-271 (438)
130 cd05630 STKc_GRK6 Catalytic do 100.0 3.1E-31 6.7E-36 290.9 20.7 198 768-976 2-205 (285)
131 cd05072 PTKc_Lyn Catalytic dom 100.0 2E-31 4.3E-36 288.7 18.7 202 765-975 5-208 (261)
132 cd05114 PTKc_Tec_Rlk Catalytic 100.0 3.3E-31 7.2E-36 286.1 20.1 201 766-976 4-206 (256)
133 KOG0584 Serine/threonine prote 100.0 2.6E-32 5.7E-37 300.6 11.4 192 770-974 44-245 (632)
134 PTZ00283 serine/threonine prot 100.0 1.9E-31 4.1E-36 312.8 19.4 204 764-975 30-248 (496)
135 cd05632 STKc_GRK5 Catalytic do 100.0 4.1E-31 8.8E-36 290.0 20.7 197 768-975 2-204 (285)
136 KOG4236 Serine/threonine prote 100.0 2.5E-32 5.4E-37 290.9 9.7 201 771-983 569-777 (888)
137 KOG0690 Serine/threonine prote 100.0 1.6E-32 3.4E-37 276.8 7.7 198 766-975 168-371 (516)
138 KOG2345 Serine/threonine prote 100.0 1.8E-32 4E-37 268.0 7.8 216 766-982 21-251 (302)
139 PTZ00036 glycogen synthase kin 100.0 3.2E-31 6.9E-36 307.3 19.6 197 766-976 66-275 (440)
140 cd05105 PTKc_PDGFR_alpha Catal 100.0 4.5E-31 9.7E-36 301.3 20.2 204 765-976 36-344 (400)
141 cd05113 PTKc_Btk_Bmx Catalytic 100.0 5.3E-31 1.2E-35 284.4 19.5 201 766-976 4-206 (256)
142 cd05068 PTKc_Frk_like Catalyti 100.0 8.4E-31 1.8E-35 283.8 20.8 202 766-976 6-209 (261)
143 KOG4279 Serine/threonine prote 100.0 3.5E-32 7.6E-37 298.0 9.9 195 773-977 582-783 (1226)
144 cd07868 STKc_CDK8 Catalytic do 100.0 6.4E-31 1.4E-35 293.4 20.2 198 771-976 6-220 (317)
145 cd05108 PTKc_EGFR Catalytic do 100.0 6.4E-31 1.4E-35 293.1 19.8 200 766-975 7-215 (316)
146 KOG4278 Protein tyrosine kinas 100.0 4.4E-32 9.6E-37 293.6 9.7 216 767-993 268-486 (1157)
147 cd05059 PTKc_Tec_like Catalyti 100.0 8.5E-31 1.8E-35 282.9 19.4 200 766-975 4-205 (256)
148 cd05048 PTKc_Ror Catalytic Dom 100.0 8.5E-31 1.8E-35 287.4 19.5 203 766-976 5-231 (283)
149 cd07875 STKc_JNK1 Catalytic do 100.0 5.6E-31 1.2E-35 299.6 18.7 197 763-975 21-228 (364)
150 cd07872 STKc_PCTAIRE2 Catalyti 100.0 7.2E-31 1.6E-35 291.8 19.0 199 766-976 6-209 (309)
151 cd05071 PTKc_Src Catalytic dom 100.0 1E-30 2.2E-35 283.2 19.7 201 766-976 6-208 (262)
152 KOG4257 Focal adhesion tyrosin 100.0 2.4E-31 5.2E-36 288.8 14.3 198 768-976 391-597 (974)
153 cd07863 STKc_CDK4 Catalytic do 100.0 1.2E-30 2.6E-35 287.0 20.1 197 767-975 1-210 (288)
154 KOG0577 Serine/threonine prote 100.0 2.4E-32 5.1E-37 294.9 6.1 193 766-974 26-227 (948)
155 cd07853 STKc_NLK Catalytic dom 100.0 8.8E-31 1.9E-35 298.7 19.4 198 767-976 1-209 (372)
156 cd05049 PTKc_Trk Catalytic dom 100.0 8.5E-31 1.8E-35 287.0 18.2 202 766-975 5-228 (280)
157 PHA03207 serine/threonine kina 100.0 7.8E-31 1.7E-35 300.7 18.6 199 765-977 91-292 (392)
158 KOG0612 Rho-associated, coiled 100.0 5.9E-32 1.3E-36 313.3 8.9 200 765-975 74-284 (1317)
159 cd07874 STKc_JNK3 Catalytic do 100.0 7.1E-31 1.5E-35 297.7 17.7 197 763-975 14-221 (355)
160 cd05052 PTKc_Abl Catalytic dom 100.0 1.7E-30 3.6E-35 281.8 19.8 201 766-975 6-209 (263)
161 cd08227 PK_STRAD_alpha Pseudok 100.0 1.5E-30 3.2E-35 291.6 20.0 203 770-975 2-213 (327)
162 cd08529 STKc_FA2-like Catalyti 100.0 1.7E-30 3.6E-35 280.5 19.6 200 767-976 1-205 (256)
163 KOG0662 Cyclin-dependent kinas 100.0 1.6E-31 3.5E-36 247.8 9.8 217 767-999 3-226 (292)
164 cd05067 PTKc_Lck_Blk Catalytic 100.0 2.3E-30 4.9E-35 280.2 20.4 202 765-976 5-208 (260)
165 cd05586 STKc_Sck1_like Catalyt 100.0 3.7E-31 8E-36 296.8 14.6 190 774-975 1-200 (330)
166 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 2.5E-30 5.5E-35 279.9 20.6 200 766-975 6-207 (260)
167 KOG0604 MAP kinase-activated p 100.0 1.2E-31 2.6E-36 268.5 9.3 199 764-976 59-267 (400)
168 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1E-30 2.2E-35 295.1 18.1 198 761-975 10-219 (343)
169 cd05082 PTKc_Csk Catalytic dom 100.0 2.6E-30 5.7E-35 279.1 20.6 196 766-975 6-203 (256)
170 PTZ00284 protein kinase; Provi 100.0 1.1E-30 2.5E-35 306.4 19.1 197 765-976 128-349 (467)
171 KOG0984 Mitogen-activated prot 100.0 1.4E-31 3.1E-36 254.3 9.2 207 768-985 48-265 (282)
172 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.5E-30 3.2E-35 281.9 18.3 201 766-976 6-209 (261)
173 cd06654 STKc_PAK1 Catalytic do 100.0 1.2E-30 2.6E-35 287.9 17.9 205 759-976 13-220 (296)
174 cd05090 PTKc_Ror1 Catalytic do 100.0 2.2E-30 4.8E-35 284.1 19.9 202 766-975 5-230 (283)
175 cd05062 PTKc_IGF-1R Catalytic 100.0 2.3E-30 5E-35 283.0 19.9 204 765-976 5-226 (277)
176 PF07714 Pkinase_Tyr: Protein 100.0 7.5E-31 1.6E-35 283.5 15.8 198 770-975 3-209 (259)
177 cd06619 PKc_MKK5 Catalytic dom 100.0 3.4E-30 7.3E-35 282.0 21.1 192 767-976 2-197 (279)
178 cd05054 PTKc_VEGFR Catalytic d 100.0 1.7E-30 3.7E-35 291.5 19.1 203 766-976 7-280 (337)
179 cd06656 STKc_PAK3 Catalytic do 100.0 2.5E-30 5.4E-35 285.5 19.8 205 760-977 13-220 (297)
180 cd08219 STKc_Nek3 Catalytic do 100.0 2.4E-30 5.1E-35 279.2 19.1 199 767-975 1-203 (255)
181 cd07867 STKc_CDC2L6 Catalytic 100.0 3.1E-30 6.7E-35 288.0 20.7 196 772-975 7-219 (317)
182 cd05093 PTKc_TrkB Catalytic do 100.0 3E-30 6.5E-35 283.8 20.1 203 766-976 5-227 (288)
183 cd06615 PKc_MEK Catalytic doma 100.0 3.3E-30 7.1E-35 286.2 20.4 196 767-975 2-201 (308)
184 cd06631 STKc_YSK4 Catalytic do 100.0 4.8E-30 1E-34 278.5 21.2 203 767-975 1-211 (265)
185 cd06646 STKc_MAP4K5 Catalytic 100.0 4.1E-30 8.9E-35 279.4 20.6 199 765-975 8-212 (267)
186 PTZ00266 NIMA-related protein 100.0 1.5E-30 3.3E-35 312.5 18.2 204 764-975 11-246 (1021)
187 cd05069 PTKc_Yes Catalytic dom 100.0 5E-30 1.1E-34 277.6 20.6 201 766-976 6-208 (260)
188 cd05111 PTK_HER3 Pseudokinase 100.0 4.5E-30 9.7E-35 280.9 20.3 201 766-976 7-216 (279)
189 cd06637 STKc_TNIK Catalytic do 100.0 3.3E-30 7.1E-35 281.0 19.1 201 765-975 5-219 (272)
190 cd05033 PTKc_EphR Catalytic do 100.0 6.1E-30 1.3E-34 277.9 21.1 201 766-975 4-212 (266)
191 cd05034 PTKc_Src_like Catalyti 100.0 4.5E-30 9.8E-35 278.1 19.9 202 765-975 5-208 (261)
192 PF00069 Pkinase: Protein kina 100.0 2E-30 4.2E-35 280.6 17.0 196 768-975 1-202 (260)
193 cd06625 STKc_MEKK3_like Cataly 100.0 7E-30 1.5E-34 276.9 21.1 201 766-975 2-210 (263)
194 PHA03211 serine/threonine kina 100.0 3.2E-30 6.9E-35 297.4 19.2 194 766-973 169-363 (461)
195 KOG0586 Serine/threonine prote 100.0 1.2E-30 2.5E-35 287.5 14.6 199 765-976 55-259 (596)
196 cd05580 STKc_PKA Catalytic dom 100.0 5.8E-30 1.3E-34 281.8 20.2 196 766-976 1-202 (290)
197 cd08228 STKc_Nek6 Catalytic do 100.0 4.3E-30 9.3E-35 279.3 18.7 200 766-975 2-209 (267)
198 cd05094 PTKc_TrkC Catalytic do 100.0 6.5E-30 1.4E-34 281.6 20.3 203 766-976 5-230 (291)
199 cd08221 STKc_Nek9 Catalytic do 100.0 9.1E-30 2E-34 274.8 20.8 199 767-975 1-204 (256)
200 cd05073 PTKc_Hck Catalytic dom 100.0 7.1E-30 1.5E-34 276.4 19.9 201 765-975 5-207 (260)
201 cd06612 STKc_MST1_2 Catalytic 100.0 5.7E-30 1.2E-34 276.4 19.0 200 766-976 3-203 (256)
202 cd05083 PTKc_Chk Catalytic dom 100.0 6.1E-30 1.3E-34 275.8 19.2 196 766-976 6-202 (254)
203 cd06645 STKc_MAP4K3 Catalytic 100.0 4.2E-30 9.1E-35 279.4 17.9 199 765-975 8-212 (267)
204 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.2E-29 2.5E-34 275.9 21.2 203 767-975 1-215 (267)
205 cd06652 STKc_MEKK2 Catalytic d 100.0 9E-30 2E-34 276.4 20.3 201 766-975 2-212 (265)
206 cd05574 STKc_phototropin_like 100.0 7.8E-30 1.7E-34 284.5 20.2 208 766-976 1-236 (316)
207 cd05039 PTKc_Csk_like Catalyti 100.0 1.1E-29 2.4E-34 274.1 20.8 197 766-976 6-204 (256)
208 cd07873 STKc_PCTAIRE1 Catalyti 100.0 6.9E-30 1.5E-34 282.8 19.5 199 766-976 6-209 (301)
209 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 8.7E-30 1.9E-34 279.4 20.1 199 767-975 4-213 (283)
210 cd05055 PTKc_PDGFR Catalytic d 100.0 8.9E-30 1.9E-34 281.7 20.3 204 765-976 34-248 (302)
211 cd05109 PTKc_HER2 Catalytic do 100.0 8.1E-30 1.8E-34 279.0 19.7 201 766-976 7-216 (279)
212 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 9E-30 1.9E-34 277.1 19.9 197 772-976 1-214 (269)
213 cd07861 STKc_CDK1_euk Catalyti 100.0 9.8E-30 2.1E-34 279.3 20.2 199 767-976 1-206 (285)
214 cd08223 STKc_Nek4 Catalytic do 100.0 1.2E-29 2.6E-34 274.1 20.4 199 767-975 1-205 (257)
215 KOG1025 Epidermal growth facto 100.0 5.6E-31 1.2E-35 294.5 10.1 199 768-976 698-905 (1177)
216 cd05084 PTKc_Fes Catalytic dom 100.0 1.1E-29 2.4E-34 273.5 20.0 196 772-976 1-201 (252)
217 cd05115 PTKc_Zap-70 Catalytic 100.0 1.3E-29 2.8E-34 273.6 20.5 195 773-976 2-203 (257)
218 KOG0983 Mitogen-activated prot 100.0 7.9E-31 1.7E-35 259.2 9.8 196 767-974 93-296 (391)
219 cd06644 STKc_STK10_LOK Catalyt 100.0 1.4E-29 3.1E-34 279.0 21.1 199 766-975 12-218 (292)
220 cd05085 PTKc_Fer Catalytic dom 100.0 1.6E-29 3.4E-34 272.0 20.9 195 772-976 1-199 (250)
221 cd06655 STKc_PAK2 Catalytic do 100.0 1.1E-29 2.4E-34 280.1 20.2 200 764-976 17-219 (296)
222 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.1E-29 2.5E-34 281.5 20.3 203 765-975 14-243 (304)
223 cd05036 PTKc_ALK_LTK Catalytic 100.0 8E-30 1.7E-34 278.7 18.9 203 766-976 6-226 (277)
224 cd05107 PTKc_PDGFR_beta Cataly 100.0 9.5E-30 2.1E-34 290.1 20.2 203 765-975 36-345 (401)
225 cd05061 PTKc_InsR Catalytic do 100.0 9.5E-30 2E-34 279.8 19.5 203 765-975 5-225 (288)
226 cd05032 PTKc_InsR_like Catalyt 100.0 9.8E-30 2.1E-34 278.0 19.5 203 765-975 5-225 (277)
227 cd05066 PTKc_EphR_A Catalytic 100.0 1.2E-29 2.6E-34 275.7 20.0 203 766-976 4-214 (267)
228 cd05088 PTKc_Tie2 Catalytic do 100.0 6E-30 1.3E-34 283.4 17.9 199 766-975 7-227 (303)
229 cd05098 PTKc_FGFR1 Catalytic d 100.0 1E-29 2.2E-34 282.3 19.7 203 765-975 17-246 (307)
230 KOG0199 ACK and related non-re 100.0 7.9E-31 1.7E-35 288.4 10.6 202 767-976 111-320 (1039)
231 cd05042 PTKc_Aatyk Catalytic d 100.0 9.7E-30 2.1E-34 276.8 19.1 196 772-975 1-213 (269)
232 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.4E-29 3.1E-34 275.1 20.4 200 766-975 2-209 (267)
233 cd05092 PTKc_TrkA Catalytic do 100.0 9.4E-30 2E-34 278.6 19.1 202 766-975 5-228 (280)
234 cd05089 PTKc_Tie1 Catalytic do 100.0 9.4E-30 2E-34 281.1 19.1 200 766-976 2-223 (297)
235 PHA03209 serine/threonine kina 100.0 7.1E-30 1.5E-34 289.1 18.5 190 766-972 66-256 (357)
236 cd05035 PTKc_Axl_like Catalyti 100.0 1.7E-29 3.7E-34 275.5 20.7 200 768-975 1-219 (273)
237 KOG0608 Warts/lats-like serine 100.0 2.9E-30 6.3E-35 280.7 14.3 219 768-991 631-892 (1034)
238 cd06611 STKc_SLK_like Catalyti 100.0 8.2E-30 1.8E-34 279.1 18.1 199 766-975 5-211 (280)
239 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 9.1E-30 2E-34 279.7 18.4 199 766-975 1-210 (286)
240 cd06643 STKc_SLK Catalytic dom 100.0 1.5E-29 3.2E-34 277.4 20.0 198 767-975 6-211 (282)
241 KOG0596 Dual specificity; seri 100.0 1.8E-30 3.9E-35 280.2 12.3 212 766-994 361-588 (677)
242 cd05045 PTKc_RET Catalytic dom 100.0 1.2E-29 2.6E-34 279.3 19.0 202 767-976 1-234 (290)
243 KOG1151 Tousled-like protein k 100.0 9.7E-31 2.1E-35 273.4 9.4 210 764-976 461-688 (775)
244 cd05091 PTKc_Ror2 Catalytic do 100.0 8.6E-30 1.9E-34 279.4 17.5 201 767-975 6-230 (283)
245 cd08229 STKc_Nek7 Catalytic do 100.0 8.4E-30 1.8E-34 277.0 17.2 200 766-975 2-209 (267)
246 cd05116 PTKc_Syk Catalytic dom 100.0 2E-29 4.3E-34 272.3 19.8 193 773-975 2-202 (257)
247 cd05099 PTKc_FGFR4 Catalytic d 100.0 2.1E-29 4.6E-34 280.5 20.7 202 766-975 12-240 (314)
248 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.3E-29 5E-34 276.5 20.5 199 766-976 1-205 (286)
249 cd07844 STKc_PCTAIRE_like Cata 100.0 2.2E-29 4.7E-34 277.4 20.3 199 766-976 5-208 (291)
250 cd06609 STKc_MST3_like Catalyt 100.0 1.5E-29 3.3E-34 276.1 18.8 197 766-975 1-201 (274)
251 cd05112 PTKc_Itk Catalytic dom 100.0 2.3E-29 5.1E-34 271.6 20.0 200 766-975 4-205 (256)
252 cd05043 PTK_Ryk Pseudokinase d 100.0 1.8E-29 3.9E-34 276.5 19.3 203 765-975 5-223 (280)
253 cd05040 PTKc_Ack_like Catalyti 100.0 1.8E-29 3.9E-34 272.7 19.1 196 772-975 1-204 (257)
254 cd06613 STKc_MAP4K3_like Catal 100.0 2.4E-29 5.2E-34 272.5 20.0 200 766-976 3-208 (262)
255 KOG1006 Mitogen-activated prot 100.0 5.1E-32 1.1E-36 266.9 -0.9 194 771-975 69-272 (361)
256 KOG0579 Ste20-like serine/thre 100.0 3E-31 6.5E-36 287.7 5.0 198 766-974 32-237 (1187)
257 cd05065 PTKc_EphR_B Catalytic 100.0 2.4E-29 5.2E-34 273.7 19.9 205 766-976 4-216 (269)
258 cd06651 STKc_MEKK3 Catalytic d 100.0 3.3E-29 7.1E-34 272.2 20.9 200 767-975 3-212 (266)
259 cd05051 PTKc_DDR Catalytic dom 100.0 2.5E-29 5.5E-34 277.7 20.3 202 766-975 5-237 (296)
260 cd05053 PTKc_FGFR Catalytic do 100.0 1.9E-29 4E-34 278.3 19.2 203 765-975 11-238 (293)
261 cd00192 PTKc Catalytic domain 100.0 2.8E-29 6.2E-34 271.6 20.0 196 772-975 1-211 (262)
262 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 2.8E-29 6.1E-34 275.5 20.1 201 766-974 4-213 (284)
263 KOG4645 MAPKKK (MAP kinase kin 100.0 1.9E-31 4E-36 313.0 2.9 209 760-976 1229-1445(1509)
264 cd05075 PTKc_Axl Catalytic dom 100.0 2.9E-29 6.4E-34 273.5 20.0 199 769-975 2-218 (272)
265 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.9E-29 4.1E-34 284.3 19.1 202 766-975 7-285 (343)
266 cd06632 STKc_MEKK1_plant Catal 100.0 2.9E-29 6.2E-34 271.2 19.8 197 767-976 1-206 (258)
267 cd07870 STKc_PFTAIRE2 Catalyti 100.0 3.7E-29 8E-34 275.6 21.0 199 766-976 5-208 (291)
268 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.6E-29 3.5E-34 277.3 17.9 199 766-977 5-207 (284)
269 cd05097 PTKc_DDR_like Catalyti 100.0 1.9E-29 4E-34 278.5 18.4 203 766-976 5-237 (295)
270 cd06630 STKc_MEKK1 Catalytic d 100.0 2.7E-29 5.8E-34 273.1 19.3 201 767-975 1-211 (268)
271 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 2.8E-29 6E-34 271.9 19.3 189 772-975 1-213 (262)
272 cd06610 STKc_OSR1_SPAK Catalyt 100.0 4.2E-29 9.1E-34 271.3 20.7 205 766-976 1-211 (267)
273 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 2.7E-29 5.8E-34 275.6 19.2 200 766-973 4-213 (284)
274 cd05609 STKc_MAST Catalytic do 100.0 3.6E-29 7.7E-34 277.6 20.4 204 767-975 2-219 (305)
275 cd05063 PTKc_EphR_A2 Catalytic 100.0 4.2E-29 9.1E-34 271.7 20.5 202 766-975 5-214 (268)
276 KOG0696 Serine/threonine prote 100.0 1.5E-30 3.2E-35 270.0 8.5 199 766-976 349-554 (683)
277 cd05060 PTKc_Syk_like Catalyti 100.0 4.8E-29 1E-33 269.3 20.7 195 772-976 1-203 (257)
278 cd07839 STKc_CDK5 Catalytic do 100.0 1.9E-29 4.2E-34 276.9 17.6 197 767-975 1-203 (284)
279 cd08218 STKc_Nek1 Catalytic do 100.0 3.4E-29 7.3E-34 270.4 19.2 199 767-975 1-204 (256)
280 cd05057 PTKc_EGFR_like Catalyt 100.0 3.6E-29 7.7E-34 273.9 19.6 201 766-976 7-216 (279)
281 cd06640 STKc_MST4 Catalytic do 100.0 3.7E-29 8E-34 273.5 19.6 198 766-976 4-205 (277)
282 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.1E-29 2.4E-34 277.6 15.4 198 766-976 4-205 (277)
283 cd05095 PTKc_DDR2 Catalytic do 100.0 3.2E-29 7E-34 276.7 19.2 202 766-975 5-237 (296)
284 cd06638 STKc_myosinIIIA Cataly 100.0 3E-29 6.4E-34 275.7 18.7 204 763-976 15-233 (286)
285 cd08220 STKc_Nek8 Catalytic do 100.0 4.4E-29 9.5E-34 269.4 19.7 198 767-975 1-204 (256)
286 PHA03390 pk1 serine/threonine- 100.0 7.9E-29 1.7E-33 269.1 21.7 204 763-985 11-219 (267)
287 cd06636 STKc_MAP4K4_6 Catalyti 100.0 4.3E-29 9.3E-34 273.7 19.7 203 764-976 14-230 (282)
288 cd05047 PTKc_Tie Catalytic dom 100.0 5.1E-29 1.1E-33 271.3 20.1 193 772-975 1-215 (270)
289 cd06653 STKc_MEKK3_like_1 Cata 100.0 5.6E-29 1.2E-33 270.0 20.3 201 766-975 2-212 (264)
290 cd06659 STKc_PAK6 Catalytic do 100.0 1.7E-29 3.7E-34 278.8 16.5 197 766-975 21-220 (297)
291 cd06658 STKc_PAK5 Catalytic do 100.0 1.8E-29 4E-34 277.8 16.5 197 766-975 22-221 (292)
292 cd05050 PTKc_Musk Catalytic do 100.0 4.3E-29 9.3E-34 274.6 19.3 202 766-975 5-236 (288)
293 PHA02882 putative serine/threo 100.0 4.2E-29 9.2E-34 275.2 19.3 205 766-976 12-237 (294)
294 cd05100 PTKc_FGFR3 Catalytic d 100.0 5E-29 1.1E-33 280.1 20.2 202 766-975 12-240 (334)
295 cd06647 STKc_PAK_I Catalytic d 100.0 4.5E-29 9.7E-34 275.0 19.1 201 763-976 16-219 (293)
296 cd05633 STKc_GRK3 Catalytic do 100.0 6.2E-29 1.3E-33 271.8 19.9 190 773-976 1-200 (279)
297 cd05577 STKc_GRK Catalytic dom 100.0 5.5E-29 1.2E-33 272.1 19.5 192 774-976 1-198 (277)
298 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 4.2E-29 9.1E-34 270.1 18.3 188 772-975 1-210 (259)
299 PHA03210 serine/threonine kina 100.0 1.5E-29 3.3E-34 297.7 16.1 201 762-972 144-368 (501)
300 cd05046 PTK_CCK4 Pseudokinase 100.0 5.7E-29 1.2E-33 271.7 19.2 201 766-975 5-222 (275)
301 cd06617 PKc_MKK3_6 Catalytic d 100.0 4.8E-29 1E-33 273.5 18.5 199 766-975 1-210 (283)
302 smart00219 TyrKc Tyrosine kina 100.0 9.1E-29 2E-33 267.2 20.2 199 768-975 1-208 (258)
303 cd07832 STKc_CCRK Catalytic do 100.0 7.6E-29 1.6E-33 272.4 19.6 198 767-975 1-204 (286)
304 cd06639 STKc_myosinIIIB Cataly 100.0 7E-29 1.5E-33 273.4 19.3 203 764-976 20-237 (291)
305 cd07841 STKc_CDK7 Catalytic do 100.0 7.6E-29 1.6E-33 274.2 19.5 197 767-975 1-206 (298)
306 cd07842 STKc_CDK8_like Catalyt 100.0 7.8E-29 1.7E-33 276.6 19.7 204 767-978 1-222 (316)
307 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 5.1E-29 1.1E-33 271.7 17.7 189 773-976 2-226 (274)
308 cd06626 STKc_MEKK4 Catalytic d 100.0 1.3E-28 2.7E-33 267.2 20.7 201 767-975 1-209 (264)
309 cd05056 PTKc_FAK Catalytic dom 100.0 9.9E-29 2.2E-33 269.0 19.9 200 766-976 6-213 (270)
310 cd07860 STKc_CDK2_3 Catalytic 100.0 6.8E-29 1.5E-33 272.5 18.8 198 767-975 1-204 (284)
311 cd06641 STKc_MST3 Catalytic do 100.0 1.3E-28 2.8E-33 269.2 20.9 197 766-975 4-204 (277)
312 cd05110 PTKc_HER4 Catalytic do 100.0 7E-29 1.5E-33 274.9 18.9 200 766-975 7-215 (303)
313 cd07850 STKc_JNK Catalytic dom 100.0 6.8E-29 1.5E-33 281.2 19.1 196 764-975 14-220 (353)
314 cd05578 STKc_Yank1 Catalytic d 100.0 3.2E-29 7E-34 270.9 15.6 197 767-976 1-203 (258)
315 cd06623 PKc_MAPKK_plant_like C 100.0 1.3E-28 2.8E-33 267.0 20.4 198 767-976 2-204 (264)
316 cd06608 STKc_myosinIII_like Ca 100.0 8.6E-29 1.9E-33 270.1 19.0 201 765-975 5-221 (275)
317 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.3E-28 2.8E-33 267.7 20.3 196 772-975 1-212 (268)
318 cd05058 PTKc_Met_Ron Catalytic 100.0 1.1E-28 2.4E-33 267.4 19.4 196 772-974 1-205 (262)
319 cd07865 STKc_CDK9 Catalytic do 100.0 1.2E-28 2.5E-33 274.3 20.1 210 758-975 4-227 (310)
320 cd07846 STKc_CDKL2_3 Catalytic 100.0 4.2E-29 9.2E-34 274.4 16.3 198 766-975 1-204 (286)
321 cd06624 STKc_ASK Catalytic dom 100.0 1.6E-28 3.6E-33 267.0 20.7 197 769-975 11-214 (268)
322 cd05041 PTKc_Fes_like Catalyti 100.0 1.6E-28 3.5E-33 264.2 20.4 196 772-976 1-200 (251)
323 cd06605 PKc_MAPKK Catalytic do 100.0 4.8E-29 1E-33 270.6 16.1 197 767-976 2-203 (265)
324 cd06917 STKc_NAK1_like Catalyt 100.0 1.3E-28 2.7E-33 269.3 19.5 197 767-976 2-206 (277)
325 cd05044 PTKc_c-ros Catalytic d 100.0 6.5E-29 1.4E-33 270.3 17.0 196 772-975 1-217 (269)
326 PLN00009 cyclin-dependent kina 100.0 1.5E-28 3.2E-33 271.3 20.0 199 766-975 2-207 (294)
327 cd05613 STKc_MSK1_N N-terminal 100.0 1.4E-28 3.1E-33 270.8 19.8 197 767-974 1-210 (290)
328 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.9E-28 4.2E-33 267.0 20.6 199 767-975 2-215 (272)
329 cd07849 STKc_ERK1_2_like Catal 100.0 6.7E-29 1.5E-33 279.3 17.4 200 765-975 4-213 (336)
330 cd07833 STKc_CDKL Catalytic do 100.0 1.1E-28 2.4E-33 271.4 18.7 198 767-975 2-205 (288)
331 cd06607 STKc_TAO Catalytic dom 100.0 1.6E-28 3.4E-33 272.7 20.0 197 763-975 12-217 (307)
332 cd06648 STKc_PAK_II Catalytic 100.0 2.1E-28 4.5E-33 268.6 20.6 197 766-975 19-218 (285)
333 KOG0669 Cyclin T-dependent kin 100.0 5.2E-31 1.1E-35 257.4 -0.1 210 759-976 10-233 (376)
334 cd06614 STKc_PAK Catalytic dom 100.0 1.3E-28 2.9E-33 270.5 18.9 202 763-975 16-219 (286)
335 cd05606 STKc_beta_ARK Catalyti 100.0 2.5E-28 5.5E-33 266.8 20.8 189 773-975 1-199 (278)
336 KOG0614 cGMP-dependent protein 100.0 2.3E-30 4.9E-35 275.6 4.4 198 766-976 420-623 (732)
337 cd08226 PK_STRAD_beta Pseudoki 100.0 1.6E-28 3.4E-33 275.3 19.2 201 773-976 5-214 (328)
338 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2.1E-28 4.5E-33 269.0 19.8 197 767-975 2-206 (287)
339 cd07836 STKc_Pho85 Catalytic d 100.0 1.9E-28 4.2E-33 268.9 19.4 199 767-976 1-205 (284)
340 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.6E-28 3.6E-33 269.4 18.7 203 766-976 4-216 (284)
341 cd08225 STKc_Nek5 Catalytic do 100.0 1.1E-28 2.3E-33 266.5 17.0 199 767-975 1-205 (257)
342 cd07843 STKc_CDC2L1 Catalytic 100.0 2E-28 4.3E-33 270.1 19.3 199 765-975 4-210 (293)
343 KOG0695 Serine/threonine prote 100.0 4.3E-29 9.4E-34 252.6 12.4 198 765-974 249-453 (593)
344 cd05572 STKc_cGK_PKG Catalytic 100.0 2.4E-28 5.2E-33 264.7 19.1 190 774-976 1-196 (262)
345 cd08217 STKc_Nek2 Catalytic do 100.0 2.3E-28 5.1E-33 265.0 19.0 199 767-975 1-213 (265)
346 cd07837 STKc_CdkB_plant Cataly 100.0 2.6E-28 5.6E-33 269.5 19.5 199 766-975 1-215 (295)
347 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 7.3E-29 1.6E-33 268.1 14.4 188 772-974 1-208 (258)
348 cd07845 STKc_CDK10 Catalytic d 100.0 2.9E-28 6.3E-33 270.9 19.5 199 765-975 6-212 (309)
349 cd06616 PKc_MKK4 Catalytic dom 100.0 1.8E-28 3.8E-33 269.8 17.0 198 767-975 5-213 (288)
350 cd05122 PKc_STE Catalytic doma 100.0 6.7E-28 1.4E-32 259.2 21.0 197 767-975 1-200 (253)
351 cd07835 STKc_CDK1_like Catalyt 100.0 3.6E-28 7.9E-33 266.5 19.2 197 768-975 1-203 (283)
352 cd05074 PTKc_Tyro3 Catalytic d 100.0 4.3E-28 9.4E-33 264.4 19.5 201 768-976 1-220 (273)
353 KOG1035 eIF-2alpha kinase GCN2 100.0 4.5E-29 9.8E-34 291.9 12.1 201 763-967 476-813 (1351)
354 cd08216 PK_STRAD Pseudokinase 100.0 2.8E-28 6E-33 271.8 17.9 201 771-975 7-213 (314)
355 cd07855 STKc_ERK5 Catalytic do 100.0 2.3E-28 4.9E-33 274.7 17.3 202 765-975 4-215 (334)
356 KOG0671 LAMMER dual specificit 100.0 1.7E-29 3.7E-34 262.4 7.3 216 764-997 87-330 (415)
357 cd06606 STKc_MAPKKK Catalytic 100.0 8.9E-28 1.9E-32 259.4 21.0 200 767-976 1-207 (260)
358 cd06627 STKc_Cdc7_like Catalyt 100.0 8.8E-28 1.9E-32 258.8 20.6 197 767-975 1-202 (254)
359 cd07852 STKc_MAPK15 Catalytic 100.0 3.7E-28 7.9E-33 273.5 18.3 204 763-975 4-216 (337)
360 cd08528 STKc_Nek10 Catalytic d 100.0 5.3E-28 1.1E-32 263.2 18.8 199 767-975 1-216 (269)
361 KOG0664 Nemo-like MAPK-related 100.0 2.4E-30 5.1E-35 255.2 0.3 215 768-998 55-280 (449)
362 cd06657 STKc_PAK4 Catalytic do 100.0 4.1E-28 8.8E-33 267.0 17.8 192 771-975 25-219 (292)
363 cd07877 STKc_p38alpha_MAPK14 C 100.0 6.2E-28 1.3E-32 272.2 19.2 198 761-975 12-221 (345)
364 cd07880 STKc_p38gamma_MAPK12 C 100.0 5.7E-28 1.2E-32 272.2 18.8 199 760-975 9-219 (343)
365 PTZ00024 cyclin-dependent prot 100.0 8E-28 1.7E-32 270.6 19.7 207 764-976 6-238 (335)
366 cd07838 STKc_CDK4_6_like Catal 100.0 8.2E-28 1.8E-32 264.3 19.3 197 768-976 1-210 (287)
367 cd08215 STKc_Nek Catalytic dom 100.0 9.2E-28 2E-32 259.2 19.3 199 767-975 1-206 (258)
368 cd05611 STKc_Rim15_like Cataly 100.0 9E-28 2E-32 259.9 19.3 189 772-976 2-197 (260)
369 cd07866 STKc_BUR1 Catalytic do 100.0 5.8E-28 1.3E-32 268.8 18.2 206 765-975 7-230 (311)
370 cd07831 STKc_MOK Catalytic dom 100.0 9.4E-28 2E-32 263.1 19.6 194 768-975 1-202 (282)
371 cd06635 STKc_TAO1 Catalytic do 100.0 1.3E-27 2.8E-32 266.5 20.9 194 766-975 25-227 (317)
372 KOG1152 Signal transduction se 100.0 5.3E-29 1.2E-33 269.4 9.2 194 766-973 561-770 (772)
373 cd05581 STKc_PDK1 Catalytic do 100.0 4.4E-28 9.6E-33 265.3 16.5 205 767-976 2-226 (280)
374 cd07840 STKc_CDK9_like Catalyt 100.0 9.9E-28 2.1E-32 263.6 19.2 198 768-976 1-206 (287)
375 cd05579 STKc_MAST_like Catalyt 100.0 7E-28 1.5E-32 261.3 17.3 198 774-976 1-205 (265)
376 cd07864 STKc_CDK12 Catalytic d 100.0 1.7E-27 3.6E-32 264.0 20.1 201 764-975 5-221 (302)
377 cd07879 STKc_p38delta_MAPK13 C 100.0 7.4E-28 1.6E-32 271.3 17.2 196 762-975 11-218 (342)
378 cd08530 STKc_CNK2-like Catalyt 100.0 9.9E-28 2.2E-32 258.8 16.8 198 767-976 1-205 (256)
379 cd07858 STKc_TEY_MAPK_plant Ca 100.0 9.4E-28 2E-32 270.0 17.1 199 764-975 3-212 (337)
380 cd06618 PKc_MKK7 Catalytic dom 100.0 1.7E-27 3.6E-32 263.1 18.8 197 766-974 15-220 (296)
381 cd07834 STKc_MAPK Catalytic do 100.0 9.4E-28 2E-32 269.5 17.0 200 767-976 1-211 (330)
382 cd05583 STKc_MSK_N N-terminal 100.0 1.1E-27 2.5E-32 263.3 17.3 197 767-974 1-210 (288)
383 cd05610 STKc_MASTL Catalytic d 100.0 1.9E-27 4.1E-32 288.6 20.6 145 765-914 3-153 (669)
384 cd06633 STKc_TAO3 Catalytic do 99.9 4.5E-27 9.8E-32 261.5 21.4 194 766-975 21-223 (313)
385 cd07856 STKc_Sty1_Hog1 Catalyt 99.9 2.9E-27 6.2E-32 264.6 19.6 195 764-975 8-209 (328)
386 cd07830 STKc_MAK_like Catalyti 99.9 2.1E-27 4.6E-32 260.4 18.0 196 768-975 1-202 (283)
387 KOG0587 Traf2- and Nck-interac 99.9 1.5E-27 3.2E-32 271.0 16.8 203 765-977 18-233 (953)
388 cd07857 STKc_MPK1 Catalytic do 99.9 3E-27 6.5E-32 265.4 18.6 200 767-975 1-213 (332)
389 cd05118 STKc_CMGC Catalytic do 99.9 3.2E-27 6.8E-32 259.0 18.0 196 768-975 1-202 (283)
390 KOG0200 Fibroblast/platelet-de 99.9 1.7E-27 3.7E-32 284.3 16.5 217 768-992 298-541 (609)
391 cd07854 STKc_MAPK4_6 Catalytic 99.9 2E-27 4.4E-32 267.8 15.9 200 765-975 4-222 (342)
392 cd06634 STKc_TAO2 Catalytic do 99.9 6E-27 1.3E-31 260.0 18.9 194 766-975 15-217 (308)
393 cd05576 STKc_RPK118_like Catal 99.9 5.3E-27 1.1E-31 249.9 17.7 181 777-975 4-185 (237)
394 cd07829 STKc_CDK_like Catalyti 99.9 5.2E-27 1.1E-31 257.2 17.2 196 768-975 1-202 (282)
395 cd08222 STKc_Nek11 Catalytic d 99.9 4.5E-27 9.8E-32 254.4 15.7 197 767-974 1-207 (260)
396 KOG0603 Ribosomal protein S6 k 99.9 1.8E-27 3.8E-32 264.0 12.5 196 765-978 321-519 (612)
397 cd07851 STKc_p38 Catalytic dom 99.9 2.9E-27 6.3E-32 266.6 14.3 197 762-975 11-219 (343)
398 cd05123 STKc_AGC Catalytic dom 99.9 1E-26 2.2E-31 250.0 17.8 190 774-975 1-196 (250)
399 KOG1345 Serine/threonine kinas 99.9 4.9E-28 1.1E-32 239.3 6.0 220 758-993 16-246 (378)
400 KOG0665 Jun-N-terminal kinase 99.9 1.8E-27 3.9E-32 241.7 8.6 212 764-996 15-237 (369)
401 KOG0668 Casein kinase II, alph 99.9 1.4E-27 3.1E-32 230.3 6.5 207 765-988 37-249 (338)
402 KOG1290 Serine/threonine prote 99.9 1.8E-26 3.8E-31 246.0 14.2 138 758-898 68-221 (590)
403 PLN03224 probable serine/threo 99.9 3.5E-26 7.7E-31 262.8 17.5 201 765-974 144-435 (507)
404 PLN03225 Serine/threonine-prot 99.9 2.8E-26 6E-31 271.2 16.9 199 765-974 131-381 (566)
405 smart00221 STYKc Protein kinas 99.9 1.1E-25 2.4E-30 237.5 17.9 197 768-974 1-202 (225)
406 KOG1027 Serine/threonine prote 99.9 1.3E-26 2.9E-31 262.1 6.1 200 771-980 514-723 (903)
407 KOG1024 Receptor-like protein 99.9 1.2E-25 2.7E-30 232.7 10.6 205 766-978 284-505 (563)
408 smart00220 S_TKc Serine/Threon 99.9 1.4E-24 3E-29 231.8 17.0 184 778-974 1-188 (244)
409 PLN03210 Resistant to P. syrin 99.9 4.3E-24 9.3E-29 273.8 21.6 336 122-498 554-904 (1153)
410 KOG1167 Serine/threonine prote 99.9 3.3E-25 7.2E-30 234.2 9.2 215 761-983 31-289 (418)
411 PLN03210 Resistant to P. syrin 99.9 3.2E-24 6.9E-29 275.0 19.8 339 96-474 552-904 (1153)
412 KOG4237 Extracellular matrix p 99.9 7.5E-26 1.6E-30 235.3 1.7 274 129-452 70-359 (498)
413 KOG4237 Extracellular matrix p 99.9 8.8E-27 1.9E-31 242.2 -5.7 383 252-663 72-498 (498)
414 KOG1163 Casein kinase (serine/ 99.9 1.5E-24 3.2E-29 211.3 9.5 226 765-996 14-244 (341)
415 KOG0670 U4/U6-associated splic 99.9 3.5E-25 7.5E-30 236.9 5.4 222 759-997 424-656 (752)
416 KOG1165 Casein kinase (serine/ 99.9 9.5E-24 2.1E-28 215.0 14.6 208 766-978 28-242 (449)
417 KOG0576 Mitogen-activated prot 99.9 4E-25 8.7E-30 243.6 3.7 195 765-971 14-214 (829)
418 cd00180 PKc Catalytic domain o 99.9 2.1E-22 4.6E-27 209.6 19.0 181 774-965 1-187 (215)
419 PRK09188 serine/threonine prot 99.9 6.2E-23 1.3E-27 226.2 15.6 167 764-946 16-194 (365)
420 PRK15387 E3 ubiquitin-protein 99.9 1.4E-22 2.9E-27 240.7 16.9 268 271-604 201-468 (788)
421 PRK15387 E3 ubiquitin-protein 99.9 2.4E-22 5.1E-27 238.7 18.6 266 249-580 203-468 (788)
422 PRK15370 E3 ubiquitin-protein 99.9 1.8E-22 3.8E-27 241.7 15.4 246 127-428 179-428 (754)
423 KOG1164 Casein kinase (serine/ 99.9 1.5E-21 3.3E-26 216.9 17.8 206 767-976 19-241 (322)
424 PRK15370 E3 ubiquitin-protein 99.8 4E-21 8.6E-26 230.1 12.9 247 271-570 178-428 (754)
425 PRK12274 serine/threonine prot 99.8 3E-20 6.6E-25 185.4 12.1 196 769-981 5-216 (218)
426 PLN00181 protein SPA1-RELATED; 99.8 1.2E-20 2.7E-25 235.2 9.7 154 816-974 28-217 (793)
427 COG0515 SPS1 Serine/threonine 99.8 4.4E-19 9.5E-24 199.0 19.8 203 768-976 2-215 (384)
428 cd05147 RIO1_euk RIO kinase fa 99.8 6.9E-20 1.5E-24 186.2 11.8 137 771-915 2-167 (190)
429 PRK10359 lipopolysaccharide co 99.8 2.9E-20 6.2E-25 190.2 8.6 169 764-966 29-216 (232)
430 KOG0195 Integrin-linked kinase 99.8 1.6E-20 3.4E-25 186.0 5.1 193 768-976 192-393 (448)
431 cd05145 RIO1_like RIO kinase f 99.8 5.9E-19 1.3E-23 180.3 14.8 137 771-916 2-168 (190)
432 KOG0617 Ras suppressor protein 99.8 4.5E-20 9.8E-25 170.9 0.4 164 99-293 30-194 (264)
433 smart00750 KIND kinase non-cat 99.8 1.1E-18 2.4E-23 176.6 10.2 108 845-976 1-108 (176)
434 KOG0617 Ras suppressor protein 99.7 1.3E-19 2.8E-24 167.9 -0.7 181 122-332 29-212 (264)
435 KOG0590 Checkpoint kinase and 99.7 1E-18 2.3E-23 205.8 5.7 203 769-980 321-533 (601)
436 cd00116 LRR_RI Leucine-rich re 99.7 8.3E-20 1.8E-24 204.0 -4.7 286 323-665 2-319 (319)
437 KOG1166 Mitotic checkpoint ser 99.7 5.3E-18 1.1E-22 202.6 10.2 218 766-994 698-934 (974)
438 PRK10345 hypothetical protein; 99.7 3.1E-17 6.7E-22 168.0 14.3 136 768-913 4-158 (210)
439 cd00116 LRR_RI Leucine-rich re 99.7 1E-19 2.3E-24 203.2 -5.5 240 265-524 17-291 (319)
440 KOG0603 Ribosomal protein S6 k 99.7 1.5E-18 3.3E-23 193.3 1.8 184 773-974 1-193 (612)
441 PF14531 Kinase-like: Kinase-l 99.7 3.1E-17 6.7E-22 173.1 11.3 203 767-983 13-261 (288)
442 smart00090 RIO RIO-like kinase 99.7 7.1E-17 1.5E-21 169.8 12.5 139 767-915 29-198 (237)
443 PLN03150 hypothetical protein; 99.7 7.9E-17 1.7E-21 193.1 11.6 152 34-213 369-530 (623)
444 PRK14879 serine/threonine prot 99.7 2.9E-16 6.3E-21 164.0 13.2 132 772-914 2-143 (211)
445 PRK09605 bifunctional UGMP fam 99.7 3.8E-16 8.3E-21 185.6 15.7 135 766-915 333-477 (535)
446 cd05144 RIO2_C RIO kinase fami 99.7 3.2E-16 6.8E-21 161.6 12.2 133 768-915 17-175 (198)
447 TIGR03724 arch_bud32 Kae1-asso 99.7 2.9E-16 6.2E-21 162.3 11.4 129 773-915 1-139 (199)
448 KOG1240 Protein kinase contain 99.6 3.4E-17 7.3E-22 190.8 2.9 199 767-974 24-241 (1431)
449 KOG4158 BRPK/PTEN-induced prot 99.6 4.9E-16 1.1E-20 162.4 10.5 149 818-974 274-459 (598)
450 KOG0606 Microtubule-associated 99.6 2E-16 4.4E-21 184.6 5.8 174 766-979 83-265 (1205)
451 cd05120 APH_ChoK_like Aminogly 99.6 1.6E-14 3.5E-19 141.9 12.7 135 770-914 2-138 (155)
452 KOG1033 eIF-2alpha kinase PEK/ 99.6 5.5E-16 1.2E-20 169.8 1.0 129 832-967 328-457 (516)
453 cd05119 RIO RIO kinase family, 99.6 2E-14 4.3E-19 147.0 11.8 133 771-915 2-164 (187)
454 PRK01723 3-deoxy-D-manno-octul 99.5 7.1E-14 1.5E-18 147.4 13.8 133 771-914 36-191 (239)
455 KOG1023 Natriuretic peptide re 99.5 2.9E-14 6.3E-19 160.1 10.2 158 814-980 1-166 (484)
456 KOG0590 Checkpoint kinase and 99.4 1.7E-14 3.6E-19 170.3 0.6 216 766-988 20-246 (601)
457 TIGR01982 UbiB 2-polyprenylphe 99.4 7.1E-13 1.5E-17 152.1 13.9 148 760-916 112-308 (437)
458 KOG0532 Leucine-rich repeat (L 99.4 1.4E-14 3.1E-19 158.3 -0.7 175 124-308 73-247 (722)
459 KOG0532 Leucine-rich repeat (L 99.4 7.4E-15 1.6E-19 160.6 -3.3 174 465-647 77-251 (722)
460 COG4886 Leucine-rich repeat (L 99.4 6.7E-13 1.5E-17 152.7 7.0 182 123-337 113-295 (394)
461 COG4886 Leucine-rich repeat (L 99.3 1.5E-12 3.2E-17 149.9 9.0 199 299-530 97-296 (394)
462 PLN03150 hypothetical protein; 99.3 2.9E-12 6.2E-17 154.0 8.4 106 558-664 419-526 (623)
463 PRK04750 ubiB putative ubiquin 99.3 1.2E-11 2.7E-16 143.0 11.1 153 758-917 112-316 (537)
464 cd05151 ChoK Choline Kinase (C 99.2 2.2E-11 4.8E-16 122.2 9.7 130 771-914 3-136 (170)
465 KOG4658 Apoptotic ATPase [Sign 99.1 2.3E-11 4.9E-16 148.9 5.0 127 102-233 523-652 (889)
466 KOG1243 Protein kinase [Genera 99.1 3.4E-10 7.3E-15 128.3 13.2 163 788-968 35-199 (690)
467 KOG3087 Serine/threonine prote 99.1 6.4E-10 1.4E-14 106.2 12.6 141 770-914 11-165 (229)
468 KOG3207 Beta-tubulin folding c 99.1 1.3E-11 2.7E-16 131.9 0.3 209 437-667 119-340 (505)
469 KOG0601 Cyclin-dependent kinas 99.1 1E-10 2.2E-15 131.7 6.9 200 766-973 114-328 (524)
470 KOG1259 Nischarin, modulator o 99.1 2.5E-11 5.3E-16 123.0 1.8 131 486-645 283-414 (490)
471 KOG1259 Nischarin, modulator o 99.1 1.9E-11 4.2E-16 123.8 1.0 135 409-570 278-412 (490)
472 cd05146 RIO3_euk RIO kinase fa 99.1 1.2E-09 2.6E-14 109.8 13.7 133 772-915 3-174 (197)
473 KOG0531 Protein phosphatase 1, 99.1 2.5E-11 5.4E-16 139.8 1.1 175 411-594 91-268 (414)
474 KOG4658 Apoptotic ATPase [Sign 99.1 3.7E-11 8E-16 147.1 2.4 128 102-231 545-676 (889)
475 cd05154 ACAD10_11_like Acyl-Co 99.1 1E-09 2.2E-14 115.5 12.7 140 772-914 4-206 (223)
476 KOG0531 Protein phosphatase 1, 99.1 2.5E-11 5.4E-16 139.8 -0.2 247 293-598 70-322 (414)
477 KOG1266 Protein kinase [Signal 99.0 1.7E-10 3.6E-15 119.0 5.4 155 812-970 119-280 (458)
478 PF14580 LRR_9: Leucine-rich r 99.0 8.5E-11 1.8E-15 115.7 3.1 124 508-659 16-146 (175)
479 COG3642 Mn2+-dependent serine/ 99.0 1.7E-09 3.6E-14 104.3 11.6 129 772-914 2-140 (204)
480 KOG1909 Ran GTPase-activating 99.0 2.2E-11 4.9E-16 126.8 -3.7 91 97-187 25-133 (382)
481 PF08263 LRRNT_2: Leucine rich 99.0 5.4E-10 1.2E-14 82.7 4.4 40 36-75 2-43 (43)
482 PF14580 LRR_9: Leucine-rich r 99.0 2.3E-10 4.9E-15 112.7 3.0 110 553-667 15-127 (175)
483 KOG3207 Beta-tubulin folding c 98.9 1.6E-10 3.5E-15 123.6 0.5 209 292-524 118-339 (505)
484 KOG1909 Ran GTPase-activating 98.9 6.7E-11 1.5E-15 123.3 -2.8 248 265-523 24-310 (382)
485 PRK15123 lipopolysaccharide co 98.8 3.4E-08 7.4E-13 105.3 14.1 139 772-914 28-194 (268)
486 KOG1859 Leucine-rich repeat pr 98.8 1.2E-10 2.5E-15 131.2 -6.1 126 535-667 166-293 (1096)
487 KOG0601 Cyclin-dependent kinas 98.8 1.9E-09 4.2E-14 121.5 2.6 191 765-970 264-464 (524)
488 KOG0606 Microtubule-associated 98.8 1.8E-09 4E-14 127.4 2.4 209 766-979 804-1042(1205)
489 PF13855 LRR_8: Leucine rich r 98.7 1.2E-08 2.7E-13 82.5 3.7 60 464-523 2-61 (61)
490 COG0478 RIO-like serine/threon 98.7 6.3E-08 1.4E-12 99.1 9.6 132 769-914 94-251 (304)
491 PF01163 RIO1: RIO1 family; I 98.7 1E-07 2.2E-12 95.7 10.9 123 781-915 1-156 (188)
492 PF13855 LRR_8: Leucine rich r 98.7 1.9E-08 4.1E-13 81.4 4.0 59 272-330 2-60 (61)
493 KOG3741 Poly(A) ribonuclease s 98.6 4.6E-07 1E-11 99.8 13.8 166 778-970 288-474 (655)
494 PRK09902 hypothetical protein; 98.5 1.6E-06 3.4E-11 87.4 14.1 137 774-914 26-179 (216)
495 COG0661 AarF Predicted unusual 98.5 5.2E-07 1.1E-11 104.1 11.8 150 760-917 120-317 (517)
496 COG4248 Uncharacterized protei 98.5 2E-06 4.3E-11 92.4 14.7 193 769-975 14-225 (637)
497 KOG1859 Leucine-rich repeat pr 98.5 5.5E-09 1.2E-13 118.0 -6.2 124 415-545 164-291 (1096)
498 PF06293 Kdo: Lipopolysacchari 98.4 1.2E-06 2.6E-11 90.5 11.0 105 805-914 56-170 (206)
499 TIGR02172 Fb_sc_TIGR02172 Fibr 98.4 2.7E-06 5.9E-11 89.0 13.3 138 772-913 7-181 (226)
500 KOG2137 Protein kinase [Signal 98.3 2E-07 4.4E-12 106.6 1.2 104 868-973 105-211 (700)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.8e-113 Score=1098.32 Aligned_cols=857 Identities=36% Similarity=0.594 Sum_probs=607.1
Q ss_pred cHHHHHHHHHHHHhCCCCCCccCCCCCCCCCCCccceEEeCCCCcEEEEEeccccccccCCcccccCCCCcEEeccCCcc
Q 001873 35 LDEQGQALLTWKNSLNSSTDALSSWNPAETSPCKWFGIHCSSNGEVVEISLKAVDLQGSLPSIFQPLKSLKRLIISSCNL 114 (1001)
Q Consensus 35 ~~~~~~aLl~~k~~~~~~~~~l~sW~~~~~~~c~w~gv~c~~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~~~l 114 (1001)
.++|++||++||+++.+|.+.+.+|+. +.+||.|.||+|+..++|+++++.++.+.|.+|+.+..+++|+.|+|++|++
T Consensus 27 ~~~~~~~l~~~~~~~~~~~~~~~~w~~-~~~~c~w~gv~c~~~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~ 105 (968)
T PLN00113 27 HAEELELLLSFKSSINDPLKYLSNWNS-SADVCLWQGITCNNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQL 105 (968)
T ss_pred CHHHHHHHHHHHHhCCCCcccCCCCCC-CCCCCcCcceecCCCCcEEEEEecCCCccccCChHHhCCCCCCEEECCCCcc
Confidence 568999999999999888888999985 6799999999999778999988877777776666666777777777777777
Q ss_pred cCCCCcccC-CccccccccccCCccCCCCChhhhcccccceEEccCCcccCCCCccccCCccccceeccccccccccCCC
Q 001873 115 TGTIPKEFG-DYRELTFIDLSGNSLWGEIPTEVCRLRKLESLYLNTNLLEGEIPSDIGNLSSLAYLTLYDNQLSGKIPKS 193 (1001)
Q Consensus 115 ~g~~p~~~~-~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~L~~n~l~~~ip~~l~~L~~L~~L~L~~n~l~g~~p~~ 193 (1001)
+|.+|..+. .+++|++|||++|+++|.+|. +.+++|++|+|++|.+++.+|..++++++|++|+|++|.+.+.+|..
T Consensus 106 ~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~ 183 (968)
T PLN00113 106 SGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNS 183 (968)
T ss_pred CCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChh
Confidence 666666544 666777777777776666664 34666667777776666666666666666666666666666666666
Q ss_pred ccchhhhhhhhhccCcCCCCCCCcccccCccchhccccccccccccCCccccccccceeccccccccccCcccccCCCCC
Q 001873 194 IGALSKLQVFRAGGNQNLKGELPWEIGNCSNLVMLGLAETSISGNVPSSIGMLERIQTIAIYTSLLSGPIPEEIGNCSEL 273 (1001)
Q Consensus 194 ~~~l~~L~~L~l~~n~~l~~~lp~~l~~l~~L~~L~l~~~~l~~~~p~~i~~l~~L~~L~l~~n~l~g~ip~~l~~l~~L 273 (1001)
++++++|++|++++| .+. +.+|+.++++++|
T Consensus 184 ~~~l~~L~~L~L~~n-~l~------------------------------------------------~~~p~~l~~l~~L 214 (968)
T PLN00113 184 LTNLTSLEFLTLASN-QLV------------------------------------------------GQIPRELGQMKSL 214 (968)
T ss_pred hhhCcCCCeeeccCC-CCc------------------------------------------------CcCChHHcCcCCc
Confidence 666555555555555 222 2334444444444
Q ss_pred ceEeeecCcccCCCCcccCCCCCCcEEEcCCCcccccCCCCccCCCCCCEEeccCCCCCCCCCcccccccCccEEEcccc
Q 001873 274 QNLYLYQNSISGPIPGRIGALSKLKSLLLWQNSLVGAIPDELGSCTELTVVDFSDNLLTGSIPRSFGNLLKLQELQLSVN 353 (1001)
Q Consensus 274 ~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 353 (1001)
++|+|++|++++.+|..++++++|++|++++|++++.+|..++++++|+.|++++|.+++.+|..+.++++|++|+|++|
T Consensus 215 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n 294 (968)
T PLN00113 215 KWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDN 294 (968)
T ss_pred cEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCC
Confidence 44444444444444444555555555555555554445555555555555555555555455555555555555555555
Q ss_pred cccCcCChhhccccccCEEeccCCcccCccCccccccCcccEEEeecCccCCCCCcccccCcccceEeCcCccccCCCCc
Q 001873 354 QLSGTIPIEIATCTALTHLEIDNNAISGEIPADIGNINGLTLFFAWKNKLTGNIPESLSQCQELQALDFSYNNLSGPIPK 433 (1001)
Q Consensus 354 ~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~ 433 (1001)
++.+.+|..+..+++|+.|++++|.+.+..|..+..+++|+.|++++|.+++.+|..++.+++|+.|++++|++++.+|.
T Consensus 295 ~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~ 374 (968)
T PLN00113 295 SLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPE 374 (968)
T ss_pred eeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCCh
Confidence 55555555555555555555555555555555555555555555556666666666666777777777777777777777
Q ss_pred ccccccccceEEccCCcCCCCCCCCCCCCCCcceEEccccccccCCCcccCCCCCcceeeccCcccccCCcccccccccC
Q 001873 434 EIFGLRNLTKLLLLSNDLSGFIPPDIGNCTTLRRLRLNDNRLSGTIPSEMGNLKHLNFVDMSENHLVGGIPPSVVGCQSL 513 (1001)
Q Consensus 434 ~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 513 (1001)
.+..+++|+.|++++|++.+.+|..+..+++|+.|++++|++++.+|..+.+++.|+.|++++|++++.+|..+..+++|
T Consensus 375 ~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 454 (968)
T PLN00113 375 GLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSL 454 (968)
T ss_pred hHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCC
Confidence 77777777777777777777777777778888888888888888888888888888888888888888888777788888
Q ss_pred ceEEcccccCcccCCCCcccccccccCCCCcCCCCcccccccccccceeeccCccccccchhhhhccccccEEecccccc
Q 001873 514 EFLDLHSNGLTGSVPDTLPTSLQLVDLSDNRLSGSLAHSIGSLTELSKLLLSKNQLSGRIPAEILSCRKLILLDIGNNRF 593 (1001)
Q Consensus 514 ~~L~Ls~N~l~~~~p~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 593 (1001)
+.|++++|++.+.+|..+ ..++|+.|++++|++++.+|..+..+++|+.|+|++|++
T Consensus 455 ~~L~L~~n~~~~~~p~~~-----------------------~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 511 (968)
T PLN00113 455 QMLSLARNKFFGGLPDSF-----------------------GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKL 511 (968)
T ss_pred cEEECcCceeeeecCccc-----------------------ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcc
Confidence 888888888776555422 124667777777777777777777777777777777777
Q ss_pred cCCCCCccccccchhhhhhcCCCcccccccccccccccccEEEecCCcCCC-ChhhhhcccccceeEcccCCCCCCCCCC
Q 001873 594 SGEIPKELGQISSLEISLNLSSNQFSGEIPSEFSGLTKLGILDLSHNKLSG-DLDALASLQNLVSLNVSFNDFSGELPNT 672 (1001)
Q Consensus 594 ~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~ls~N~l~~~~p~~ 672 (1001)
++.+|..+..+++|+. |+|++|++++.+|..|..+++|+.|||++|++++ .+..+..+++|++|++++|+++|.+|..
T Consensus 512 ~~~~p~~~~~l~~L~~-L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~ 590 (968)
T PLN00113 512 SGEIPDELSSCKKLVS-LDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPST 590 (968)
T ss_pred eeeCChHHcCccCCCE-EECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCc
Confidence 7777777777777775 7777777777788888888888888888888876 4566778888889999999999999998
Q ss_pred ccccCCCCCCCCCCCcccccCCC--CCCCCCCCccccccchhhhHHHHHHHHHHHHHHHhhhhhhhcccC---CccCCCC
Q 001873 673 PFFRKLPLSDLASNRGLYISGGV--VSPTDSLPAGQARSAMKLVMSILVSASAVLVLLAIYVLVRTRMAN---NSFTADD 747 (1001)
Q Consensus 673 ~~~~~~~~~~~~~n~~lc~~~~~--~s~~~~~~~~~~~~~~~iv~~i~v~~~~ilvl~~~~~~~r~r~~~---~~~~~~~ 747 (1001)
.++.++..+++.+|+++|+.+.+ .++|... .. ....+.++++++++++++++++++++++|+|+.. +......
T Consensus 591 ~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (968)
T PLN00113 591 GAFLAINASAVAGNIDLCGGDTTSGLPPCKRV-RK-TPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDG 668 (968)
T ss_pred chhcccChhhhcCCccccCCccccCCCCCccc-cc-cceeeeehhHHHHHHHHHHHHHHHHHHHHhhhcccccccccccc
Confidence 88889998999999999985422 2233211 11 1111222222222222233333333333333211 1111222
Q ss_pred chhhhhhcc---ccccHHHHHhcccCCCeEeecCCeeEEEEEe-CCCCEEEEEEecCCCchhhHHHHHHHhhccCCCcee
Q 001873 748 TWEMTLYQK---LDFSIDDVVRNLTSANVIGTGSSGVVYRVTI-PNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIV 823 (1001)
Q Consensus 748 ~~~~~~~~~---~~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~Ei~~l~~l~h~nIv 823 (1001)
.|+...+.. ..++.+++.+.++..++||+|+||+||+|+. .++..||||++..... ...+|++.+++++|||||
T Consensus 669 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~l~~l~HpnIv 746 (968)
T PLN00113 669 TWELQFFDSKVSKSITINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS--IPSSEIADMGKLQHPNIV 746 (968)
T ss_pred cccccccccccchhhhHHHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc--ccHHHHHHHhhCCCCCcc
Confidence 344332221 2356677788899999999999999999997 4789999999854332 234578999999999999
Q ss_pred eEEeeeecCCceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCc
Q 001873 824 RLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQ 903 (1001)
Q Consensus 824 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~ 903 (1001)
++++++.+.+..++|||||++|+|.++++. ++|..+.+|+.|+|+|++|||+.+.++|+||||||+||+++.++.
T Consensus 747 ~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~ 821 (968)
T PLN00113 747 KLIGLCRSEKGAYLIHEYIEGKNLSEVLRN-----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDE 821 (968)
T ss_pred eEEEEEEcCCCCEEEEeCCCCCcHHHHHhc-----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCc
Confidence 999999999999999999999999999963 789999999999999999999766679999999999999999988
Q ss_pred EEEecccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcCcc
Q 001873 904 AYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLV 983 (1001)
Q Consensus 904 ~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~~~~~l~ 983 (1001)
+++. ||.+..... .....||++|||||++.+..++.++|||||||++|||+||+.||+........++
T Consensus 822 ~~~~-~~~~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~ 889 (968)
T PLN00113 822 PHLR-LSLPGLLCT-----------DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIV 889 (968)
T ss_pred eEEE-ecccccccc-----------CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHH
Confidence 8876 665443211 1122688999999999999999999999999999999999999987766666677
Q ss_pred cchhh
Q 001873 984 QWTPL 988 (1001)
Q Consensus 984 ~~~~~ 988 (1001)
+|...
T Consensus 890 ~~~~~ 894 (968)
T PLN00113 890 EWARY 894 (968)
T ss_pred HHHHH
Confidence 76654
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.7e-62 Score=628.33 Aligned_cols=512 Identities=37% Similarity=0.567 Sum_probs=424.9
Q ss_pred CCcEEeccCCcccCCCCcccCCccccccccccCCccCCCCChhhh-cccccceEEccCCcccCCCCccccCCccccceec
Q 001873 103 SLKRLIISSCNLTGTIPKEFGDYRELTFIDLSGNSLWGEIPTEVC-RLRKLESLYLNTNLLEGEIPSDIGNLSSLAYLTL 181 (1001)
Q Consensus 103 ~L~~L~l~~~~l~g~~p~~~~~l~~L~~L~Ls~n~l~g~~p~~~~-~l~~L~~L~L~~n~l~~~ip~~l~~L~~L~~L~L 181 (1001)
+++.|+|++|+++|.+|+.+..+++|++|||++|+++|.+|..+. .+++|++|+|++|.++|.+|. +.+++|++|+|
T Consensus 70 ~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~L 147 (968)
T PLN00113 70 RVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDL 147 (968)
T ss_pred cEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEEC
Confidence 566777777777777777777777777777777777777777655 777777777777777777764 45677777777
Q ss_pred cccccccccCCCccchhhhhhhhhccCcCCCCCCCcccccCccchhccccccccccccCCccccccccceeccccccccc
Q 001873 182 YDNQLSGKIPKSIGALSKLQVFRAGGNQNLKGELPWEIGNCSNLVMLGLAETSISGNVPSSIGMLERIQTIAIYTSLLSG 261 (1001)
Q Consensus 182 ~~n~l~g~~p~~~~~l~~L~~L~l~~n~~l~~~lp~~l~~l~~L~~L~l~~~~l~~~~p~~i~~l~~L~~L~l~~n~l~g 261 (1001)
++|.+++.+|..++++++|++|++++| .+.+
T Consensus 148 s~n~~~~~~p~~~~~l~~L~~L~L~~n-------------------------------------------------~l~~ 178 (968)
T PLN00113 148 SNNMLSGEIPNDIGSFSSLKVLDLGGN-------------------------------------------------VLVG 178 (968)
T ss_pred cCCcccccCChHHhcCCCCCEEECccC-------------------------------------------------cccc
Confidence 777776666665555555555555544 3445
Q ss_pred cCcccccCCCCCceEeeecCcccCCCCcccCCCCCCcEEEcCCCcccccCCCCccCCCCCCEEeccCCCCCCCCCccccc
Q 001873 262 PIPEEIGNCSELQNLYLYQNSISGPIPGRIGALSKLKSLLLWQNSLVGAIPDELGSCTELTVVDFSDNLLTGSIPRSFGN 341 (1001)
Q Consensus 262 ~ip~~l~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 341 (1001)
.+|..++++++|++|+|++|++.+.+|..++++++|+.|+|++|++++.+|..++++++|++|++++|.+++.+|..|++
T Consensus 179 ~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~ 258 (968)
T PLN00113 179 KIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGN 258 (968)
T ss_pred cCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhC
Confidence 67777888889999999999999999999999999999999999999899999999999999999999999889989999
Q ss_pred ccCccEEEcccccccCcCChhhccccccCEEeccCCcccCccCccccccCcccEEEeecCccCCCCCcccccCcccceEe
Q 001873 342 LLKLQELQLSVNQLSGTIPIEIATCTALTHLEIDNNAISGEIPADIGNINGLTLFFAWKNKLTGNIPESLSQCQELQALD 421 (1001)
Q Consensus 342 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~ 421 (1001)
+++|++|+|++|++.+.+|..+..+++|++|++++|.+.+.+|..+.++++|+.|++++|.+++.+|..+..+++|+.|+
T Consensus 259 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~ 338 (968)
T PLN00113 259 LKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQ 338 (968)
T ss_pred CCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEE
Confidence 99999999999999888888899999999999999999888888888888888888888888888888888888888888
Q ss_pred CcCccccCCCCcccccccccceEEccCCcCCCCCCCCCCCCCCcceEEccccccccCCCcccCCCCCcceeeccCccccc
Q 001873 422 FSYNNLSGPIPKEIFGLRNLTKLLLLSNDLSGFIPPDIGNCTTLRRLRLNDNRLSGTIPSEMGNLKHLNFVDMSENHLVG 501 (1001)
Q Consensus 422 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 501 (1001)
+++|.+++.+|..+..+++|+.|++++|++++.+|..+..+++|+.|++++|++.+.+|..+..+++|+.|++++|++++
T Consensus 339 L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~ 418 (968)
T PLN00113 339 LWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSG 418 (968)
T ss_pred CcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeee
Confidence 88888888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred CCcccccccccCceEEcccccCcccCCCCcccccccccCCCCcCCCCcccccccccccceeeccCccccccchhhhhccc
Q 001873 502 GIPPSVVGCQSLEFLDLHSNGLTGSVPDTLPTSLQLVDLSDNRLSGSLAHSIGSLTELSKLLLSKNQLSGRIPAEILSCR 581 (1001)
Q Consensus 502 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 581 (1001)
.+|..+..+++|+.|++++|++++. ++..+..+++|+.|++++|++.+.+|..+ ..+
T Consensus 419 ~~p~~~~~l~~L~~L~Ls~N~l~~~----------------------~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~ 475 (968)
T PLN00113 419 ELPSEFTKLPLVYFLDISNNNLQGR----------------------INSRKWDMPSLQMLSLARNKFFGGLPDSF-GSK 475 (968)
T ss_pred ECChhHhcCCCCCEEECcCCcccCc----------------------cChhhccCCCCcEEECcCceeeeecCccc-ccc
Confidence 7888788888887777777777654 34445668899999999999998888766 458
Q ss_pred cccEEecccccccCCCCCccccccchhhhhhcCCCcccccccccccccccccEEEecCCcCCC-ChhhhhcccccceeEc
Q 001873 582 KLILLDIGNNRFSGEIPKELGQISSLEISLNLSSNQFSGEIPSEFSGLTKLGILDLSHNKLSG-DLDALASLQNLVSLNV 660 (1001)
Q Consensus 582 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~l 660 (1001)
+|+.||+++|++++.+|..+..+++|+. |+|++|++++.+|+.+.++++|++|+|++|.+++ .+..+..+++|++|||
T Consensus 476 ~L~~L~ls~n~l~~~~~~~~~~l~~L~~-L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 554 (968)
T PLN00113 476 RLENLDLSRNQFSGAVPRKLGSLSELMQ-LKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDL 554 (968)
T ss_pred cceEEECcCCccCCccChhhhhhhccCE-EECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEEC
Confidence 9999999999999999999999999996 9999999999999999999999999999999998 4678899999999999
Q ss_pred ccCCCCCCCCCCc-cccCCCCCCCCCCCcc
Q 001873 661 SFNDFSGELPNTP-FFRKLPLSDLASNRGL 689 (1001)
Q Consensus 661 s~N~l~~~~p~~~-~~~~~~~~~~~~n~~l 689 (1001)
++|+++|.+|... .+..+...++.+|+-.
T Consensus 555 s~N~l~~~~p~~l~~l~~L~~l~ls~N~l~ 584 (968)
T PLN00113 555 SQNQLSGEIPKNLGNVESLVQVNISHNHLH 584 (968)
T ss_pred CCCcccccCChhHhcCcccCEEeccCCcce
Confidence 9999999999642 2444555566677643
No 3
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=4.3e-48 Score=399.81 Aligned_cols=484 Identities=29% Similarity=0.395 Sum_probs=305.2
Q ss_pred ccceEEccCCcccCCCCccccCCccccceeccccccccccCCCccchhhhhhhhhccCcCCCCCCCcccccCccchhccc
Q 001873 151 KLESLYLNTNLLEGEIPSDIGNLSSLAYLTLYDNQLSGKIPKSIGALSKLQVFRAGGNQNLKGELPWEIGNCSNLVMLGL 230 (1001)
Q Consensus 151 ~L~~L~L~~n~l~~~ip~~l~~L~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~n~~l~~~lp~~l~~l~~L~~L~l 230 (1001)
.|+.|++++|.+. .+-+.+.+|..|.+|++++|+++ ..|+++|.+.+++.+++++|+ ++ ++|++++++.+|..|++
T Consensus 46 ~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~-ls-~lp~~i~s~~~l~~l~~ 121 (565)
T KOG0472|consen 46 DLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNK-LS-ELPEQIGSLISLVKLDC 121 (565)
T ss_pred chhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccch-Hh-hccHHHhhhhhhhhhhc
Confidence 4555555555555 44445555555555555555555 555555555555555555552 22 45555555555555555
Q ss_pred cccccccccCCccccccccceeccccccccccCcccccCCCCCceEeeecCcccCCCCcccCCCCCCcEEEcCCCccccc
Q 001873 231 AETSISGNVPSSIGMLERIQTIAIYTSLLSGPIPEEIGNCSELQNLYLYQNSISGPIPGRIGALSKLKSLLLWQNSLVGA 310 (1001)
Q Consensus 231 ~~~~l~~~~p~~i~~l~~L~~L~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~ 310 (1001)
+.|.+. ++|++++.+-.++.++..+|+++ .+|+.++++.+|..|++.+|++....|..+. |+.|++||..+|-+. .
T Consensus 122 s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-t 197 (565)
T KOG0472|consen 122 SSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-T 197 (565)
T ss_pred ccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-c
Confidence 554444 33444444444444444444444 4566666666666666666666644444443 666666666666665 5
Q ss_pred CCCCccCCCCCCEEeccCCCCCCCCCcccccccCccEEEcccccccCcCChhhc-cccccCEEeccCCcccCccCccccc
Q 001873 311 IPDELGSCTELTVVDFSDNLLTGSIPRSFGNLLKLQELQLSVNQLSGTIPIEIA-TCTALTHLEIDNNAISGEIPADIGN 389 (1001)
Q Consensus 311 ~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~i~~~~~~~~~~ 389 (1001)
+|..++.+.+|+.|+|.+|++. ..| .|..+..|++|+++.|+|. .+|.+.. +++++..|||.+|+++ +.|..+.-
T Consensus 198 lP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~cl 273 (565)
T KOG0472|consen 198 LPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICL 273 (565)
T ss_pred CChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHH
Confidence 6666666666666666666665 445 5666666666666666665 4444443 5666666666666665 44555555
Q ss_pred cCcccEEEeecCccCCCCCcccccCcccceEeCcCccccCCCCccccccc---ccceEEc--cCCcCCCCCCCCCCCCCC
Q 001873 390 INGLTLFFAWKNKLTGNIPESLSQCQELQALDFSYNNLSGPIPKEIFGLR---NLTKLLL--LSNDLSGFIPPDIGNCTT 464 (1001)
Q Consensus 390 l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~---~L~~L~L--~~N~l~~~~p~~l~~l~~ 464 (1001)
+.+|..|++++|.++ ..|..++++ .|+.|.+.+|.+.. +...+-+.. -|++|.= ..-.++..
T Consensus 274 LrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrT-iRr~ii~~gT~~vLKyLrs~~~~dglS~s---------- 340 (565)
T KOG0472|consen 274 LRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRT-IRREIISKGTQEVLKYLRSKIKDDGLSQS---------- 340 (565)
T ss_pred hhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHH-HHHHHHcccHHHHHHHHHHhhccCCCCCC----------
Confidence 555555555555555 334445555 55555555555442 111111100 0111110 00000000
Q ss_pred cceEEccccccccCCCcccCCCCCcceeeccCcccccCCccccccccc---CceEEcccccCcccCCCCccc---ccccc
Q 001873 465 LRRLRLNDNRLSGTIPSEMGNLKHLNFVDMSENHLVGGIPPSVVGCQS---LEFLDLHSNGLTGSVPDTLPT---SLQLV 538 (1001)
Q Consensus 465 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~---L~~L~Ls~N~l~~~~p~~~~~---~l~~L 538 (1001)
+.=.-+.=......-.....+.+.+.|+++.-+++ .+|..+..... ....+++.|++. .+|..+.. .+..+
T Consensus 341 -e~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l 417 (565)
T KOG0472|consen 341 -EGGTETAMTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDL 417 (565)
T ss_pred -cccccccCCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHH
Confidence 00000000000011112334567888999999998 56665555444 778999999998 77776653 34448
Q ss_pred cCCCCcCCCCcccccccccccceeeccCccccccchhhhhccccccEEecccccccCCCCCccccccchhhhhhcCCCcc
Q 001873 539 DLSDNRLSGSLAHSIGSLTELSKLLLSKNQLSGRIPAEILSCRKLILLDIGNNRFSGEIPKELGQISSLEISLNLSSNQF 618 (1001)
Q Consensus 539 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l 618 (1001)
++++|.++ .+|..++.+++|..|+|++|.+. .+|.+++.+..|+.||+|+|+|. .+|+..-.+..++. +--++|++
T Consensus 418 ~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEt-llas~nqi 493 (565)
T KOG0472|consen 418 VLSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLET-LLASNNQI 493 (565)
T ss_pred HhhcCccc-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHH-HHhccccc
Confidence 88988887 88889999999999999999998 78999999999999999999998 89999888888885 77778999
Q ss_pred cccccccccccccccEEEecCCcCCCChhhhhcccccceeEcccCCCC
Q 001873 619 SGEIPSEFSGLTKLGILDLSHNKLSGDLDALASLQNLVSLNVSFNDFS 666 (1001)
Q Consensus 619 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~ls~N~l~ 666 (1001)
..+.|+.+.++.+|.+|||.+|.+...|+.++++++|++|+++||++.
T Consensus 494 ~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 494 GSVDPSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred cccChHHhhhhhhcceeccCCCchhhCChhhccccceeEEEecCCccC
Confidence 988888899999999999999999999999999999999999999997
No 4
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-43 Score=369.98 Aligned_cols=200 Identities=33% Similarity=0.490 Sum_probs=179.8
Q ss_pred HHhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEE
Q 001873 764 VVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLF 838 (1001)
Q Consensus 764 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv 838 (1001)
...+|...+.||+|+||+||+|+++ ++..||||.+.... ..+-+..|+.+++.++|||||.+++++..++..|+|
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 4567888889999999999999976 68999999986553 235578899999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCC------CcEEEeccccc
Q 001873 839 YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPG------YQAYLADFGLA 912 (1001)
Q Consensus 839 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~------~~~ki~Dfgla 912 (1001)
||||.||+|.+|++..+ .+++.+++.++.|+|.|+++||++ +||||||||+|||++.. -.+||+|||+|
T Consensus 88 MEyC~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfA 162 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRRRG--RLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFA 162 (429)
T ss_pred EEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccchh
Confidence 99999999999999754 589999999999999999999999 99999999999999764 46899999999
Q ss_pred ccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 913 RIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
+.+.+ .....+.+|+|-|||||++...+|+.|+|+||+|+|+|+|++|+.||+..+
T Consensus 163 R~L~~--------~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t 218 (429)
T KOG0595|consen 163 RFLQP--------GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET 218 (429)
T ss_pred hhCCc--------hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccC
Confidence 98752 344556799999999999999999999999999999999999999999543
No 5
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=3e-47 Score=393.53 Aligned_cols=485 Identities=28% Similarity=0.422 Sum_probs=285.9
Q ss_pred CcEEeccCCcccCCCCcccCCccccccccccCCccCCCCChhhhcccccceEEccCCcccCCCCccccCCccccceeccc
Q 001873 104 LKRLIISSCNLTGTIPKEFGDYRELTFIDLSGNSLWGEIPTEVCRLRKLESLYLNTNLLEGEIPSDIGNLSSLAYLTLYD 183 (1001)
Q Consensus 104 L~~L~l~~~~l~g~~p~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~L~~n~l~~~ip~~l~~L~~L~~L~L~~ 183 (1001)
++.|++++|.++ .+.+.+.+|..|++|++++|+++ ++|++++.+..++.|+.++|+++ ++|++++.+.+|+.|+.++
T Consensus 47 l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~ 123 (565)
T KOG0472|consen 47 LQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSS 123 (565)
T ss_pred hhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhccc
Confidence 445666666665 45555666667777777777766 66667777777777777777776 6777777777777777777
Q ss_pred cccccccCCCccchhhhhhhhhccCcCCCCCCCcccccCccchhccccccccccccCCccccccccceeccccccccccC
Q 001873 184 NQLSGKIPKSIGALSKLQVFRAGGNQNLKGELPWEIGNCSNLVMLGLAETSISGNVPSSIGMLERIQTIAIYTSLLSGPI 263 (1001)
Q Consensus 184 n~l~g~~p~~~~~l~~L~~L~l~~n~~l~~~lp~~l~~l~~L~~L~l~~~~l~~~~p~~i~~l~~L~~L~l~~n~l~g~i 263 (1001)
|.+. .+|++++.+..|..++..+|+ .. ++|..++++++|..+++.+|.+....|..+. +++|++++.-+|.++ .+
T Consensus 124 n~~~-el~~~i~~~~~l~dl~~~~N~-i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tl 198 (565)
T KOG0472|consen 124 NELK-ELPDSIGRLLDLEDLDATNNQ-IS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TL 198 (565)
T ss_pred ccee-ecCchHHHHhhhhhhhccccc-cc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cC
Confidence 7766 666677777777777766663 22 5666667777777777766666644343333 666666666666555 66
Q ss_pred cccccCCCCCceEeeecCcccCCCCcccCCCCCCcEEEcCCCcccccCCCCcc-CCCCCCEEeccCCCCCCCCCcccccc
Q 001873 264 PEEIGNCSELQNLYLYQNSISGPIPGRIGALSKLKSLLLWQNSLVGAIPDELG-SCTELTVVDFSDNLLTGSIPRSFGNL 342 (1001)
Q Consensus 264 p~~l~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~-~l~~L~~L~Ls~N~l~~~~p~~~~~l 342 (1001)
|+.++.+.+|+.|||+.|+|. ..| .|.+++.|++|+++.|++. .+|.+.. ++.++.+|||.+|+++ ..|..+.-+
T Consensus 199 P~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clL 274 (565)
T KOG0472|consen 199 PPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLL 274 (565)
T ss_pred ChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHh
Confidence 667777777777777777766 445 6666666777777776666 5555544 6666677777777766 566666666
Q ss_pred cCccEEEcccccccCcCChhhccccccCEEeccCCcccCccCccccc------cCcccEEEeecCccCCCCCcccccCcc
Q 001873 343 LKLQELQLSVNQLSGTIPIEIATCTALTHLEIDNNAISGEIPADIGN------INGLTLFFAWKNKLTGNIPESLSQCQE 416 (1001)
Q Consensus 343 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~------l~~L~~L~l~~n~l~~~~p~~l~~l~~ 416 (1001)
++|++||+|+|.|+ ..|..++++ .|+.|-+.+|.+.. +-..+-+ ++.|+. .+..-.++..
T Consensus 275 rsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrT-iRr~ii~~gT~~vLKyLrs-~~~~dglS~s---------- 340 (565)
T KOG0472|consen 275 RSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRT-IRREIISKGTQEVLKYLRS-KIKDDGLSQS---------- 340 (565)
T ss_pred hhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHH-HHHHHHcccHHHHHHHHHH-hhccCCCCCC----------
Confidence 66667777776666 455566666 66666666666542 1111100 011111 0000000000
Q ss_pred cceEeCcCccccCCCCcccccccccceEEccCCcCCCCCCCCCCCCCC---cceEEccccccccCCCcccCCCCCcce-e
Q 001873 417 LQALDFSYNNLSGPIPKEIFGLRNLTKLLLLSNDLSGFIPPDIGNCTT---LRRLRLNDNRLSGTIPSEMGNLKHLNF-V 492 (1001)
Q Consensus 417 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~---L~~L~Ls~N~l~~~~p~~~~~l~~L~~-L 492 (1001)
+.=.-+.-............+.+.+.|+++.-+++ .+|+....... ....+++.|++. .+|..+..++.+.. +
T Consensus 341 -e~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l 417 (565)
T KOG0472|consen 341 -EGGTETAMTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDL 417 (565)
T ss_pred -cccccccCCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHH
Confidence 00000000000001111223334444444444444 22332222222 455666666665 55655555554433 3
Q ss_pred eccCcccccCCcccccccccCceEEcccccCcccCCCCcccccccccCCCCcCCCCcccccccccccceeeccCcccccc
Q 001873 493 DMSENHLVGGIPPSVVGCQSLEFLDLHSNGLTGSVPDTLPTSLQLVDLSDNRLSGSLAHSIGSLTELSKLLLSKNQLSGR 572 (1001)
Q Consensus 493 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 572 (1001)
.+++|.+. .+|..++.+++|..|+|++|-+. .+|.+++.+..|++||+|.|++. .
T Consensus 418 ~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-----------------------~LP~e~~~lv~Lq~LnlS~NrFr-~ 472 (565)
T KOG0472|consen 418 VLSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-----------------------DLPEEMGSLVRLQTLNLSFNRFR-M 472 (565)
T ss_pred HhhcCccc-cchHHHHhhhcceeeecccchhh-----------------------hcchhhhhhhhhheecccccccc-c
Confidence 34444443 56666666666666666666654 34555666666677777777666 5
Q ss_pred chhhhhccccccEEecccccccCCCCCccccccchhhhhhcCCCcccccccccccccccccEEEecCCcCCC
Q 001873 573 IPAEILSCRKLILLDIGNNRFSGEIPKELGQISSLEISLNLSSNQFSGEIPSEFSGLTKLGILDLSHNKLSG 644 (1001)
Q Consensus 573 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 644 (1001)
.|..+..+..|+.+-.++|++....|..+.+++.|.+ |||.+|.+. .+|+.++++++|++|+|.+|+|..
T Consensus 473 lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~t-LDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr~ 542 (565)
T KOG0472|consen 473 LPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTT-LDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFRQ 542 (565)
T ss_pred chHHHhhHHHHHHHHhccccccccChHHhhhhhhcce-eccCCCchh-hCChhhccccceeEEEecCCccCC
Confidence 6666666666666666667776555555777777775 777777777 667778888888888888888884
No 6
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-41 Score=350.03 Aligned_cols=211 Identities=28% Similarity=0.463 Sum_probs=183.3
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC---chhhHHHHHHHhhccCCCceeeEEeeeecCC-ceEEEEEc
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD---ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKN-LKLLFYDY 841 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~-~~~lv~e~ 841 (1001)
+.+..++||+|..|+|||++++ +++.+|+|.+.... ..+++.+|++++++++||+||+++|.|...+ ...|+|||
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEY 159 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEY 159 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhh
Confidence 4556788999999999999987 68889999984332 3478999999999999999999999999888 59999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
|++|||+++++.. ..+++...-+|+.++++||.|||++ ++||||||||+|||++..|++||||||.++.+...
T Consensus 160 MDgGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS--- 232 (364)
T KOG0581|consen 160 MDGGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS--- 232 (364)
T ss_pred cCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEeccccccHHhhhh---
Confidence 9999999999875 4489999999999999999999974 29999999999999999999999999999987432
Q ss_pred CCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcCcccchhhhhccc
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLML 993 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~~~~~l~~~~~~~~~~~ 993 (1001)
...+.+||..|||||.+.+..|+.++||||||+.++|+.+|+.||-+. ..+-..|...+..+.
T Consensus 233 ------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~---~~~~~~~~~Ll~~Iv 295 (364)
T KOG0581|consen 233 ------IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPP---NPPYLDIFELLCAIV 295 (364)
T ss_pred ------hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCc---CCCCCCHHHHHHHHh
Confidence 345679999999999999999999999999999999999999999886 334445555554433
No 7
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-41 Score=370.88 Aligned_cols=222 Identities=43% Similarity=0.795 Sum_probs=193.2
Q ss_pred HHHHhcccCCCeEeecCCeeEEEEEeCCCCEEEEEEecCCCc--hhhHHHHHHHhhccCCCceeeEEeeeecCC-ceEEE
Q 001873 762 DDVVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDE--SGAFSSEIQTLGSIRHKNIVRLLGWGSNKN-LKLLF 838 (1001)
Q Consensus 762 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~-~~~lv 838 (1001)
...++.|...++||+|+||.||+|..+++..||||++..... .++|.+|+.++.+++|||+|+++|||.+.+ ..++|
T Consensus 71 ~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LV 150 (361)
T KOG1187|consen 71 RKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLV 150 (361)
T ss_pred HHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEE
Confidence 445678999999999999999999999899999998866554 467999999999999999999999999998 49999
Q ss_pred EEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCC
Q 001873 839 YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGS 918 (1001)
Q Consensus 839 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~ 918 (1001)
||||++|+|.++++......++|.+|++||.++|+|++|||..+.++||||||||+|||+|+++++||+|||+|+.....
T Consensus 151 YEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~ 230 (361)
T KOG1187|consen 151 YEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEG 230 (361)
T ss_pred EEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCcc
Confidence 99999999999998754326899999999999999999999998889999999999999999999999999999754320
Q ss_pred CCCCCCCCCCCCcc-cccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC-CCCcCcccchhhhh
Q 001873 919 GDDNCSKTNQRPQL-AGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL-PGGAPLVQWTPLMF 990 (1001)
Q Consensus 919 ~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~-~~~~~l~~~~~~~~ 990 (1001)
....... .||.+|+|||+...+..+.|+|||||||++.|++||+.|.+... .+...+++|.....
T Consensus 231 -------~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~ 297 (361)
T KOG1187|consen 231 -------DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLL 297 (361)
T ss_pred -------ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHH
Confidence 1111111 79999999999999999999999999999999999999999765 33455899875543
No 8
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-42 Score=368.20 Aligned_cols=424 Identities=22% Similarity=0.211 Sum_probs=358.4
Q ss_pred ccccccCcccccCCCCCceEeeecCcccCCCCcccCCCCCCcEEEcCCCcccccCCCCccCCCCCCEEeccCCCCCCCCC
Q 001873 257 SLLSGPIPEEIGNCSELQNLYLYQNSISGPIPGRIGALSKLKSLLLWQNSLVGAIPDELGSCTELTVVDFSDNLLTGSIP 336 (1001)
Q Consensus 257 n~l~g~ip~~l~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 336 (1001)
..+.|.+| +.-+.||+++|+++.+.+..|.++++|+.+++.+|.++ .||..-+...+|+.|+|.+|.|+..-.
T Consensus 70 ~~l~g~lp------~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~s 142 (873)
T KOG4194|consen 70 SRLKGFLP------SQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTS 142 (873)
T ss_pred cccCCcCc------cceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccH
Confidence 34555555 33567999999999888888999999999999999998 788766677779999999999987777
Q ss_pred cccccccCccEEEcccccccCcCChhhccccccCEEeccCCcccCccCccccccCcccEEEeecCccCCCCCcccccCcc
Q 001873 337 RSFGNLLKLQELQLSVNQLSGTIPIEIATCTALTHLEIDNNAISGEIPADIGNINGLTLFFAWKNKLTGNIPESLSQCQE 416 (1001)
Q Consensus 337 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~ 416 (1001)
+.+..++.|+.||||.|.|+.+.-..|..-.++++|+|++|.|+......|.++.+|..|.|++|+++...+..|+++++
T Consensus 143 e~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~ 222 (873)
T KOG4194|consen 143 EELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPK 222 (873)
T ss_pred HHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcch
Confidence 88888999999999999998665567777788999999999999888889999999999999999999887888999999
Q ss_pred cceEeCcCccccCCCCcccccccccceEEccCCcCCCCCCCCCCCCCCcceEEccccccccCCCcccCCCCCcceeeccC
Q 001873 417 LQALDFSYNNLSGPIPKEIFGLRNLTKLLLLSNDLSGFIPPDIGNCTTLRRLRLNDNRLSGTIPSEMGNLKHLNFVDMSE 496 (1001)
Q Consensus 417 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 496 (1001)
|+.|+|..|+|.-.---.|.++++|+.|.|..|++.......|-.+.++++|+|+.|+++..-..++-+|+.|+.|+||+
T Consensus 223 L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~ 302 (873)
T KOG4194|consen 223 LESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSY 302 (873)
T ss_pred hhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccch
Confidence 99999999999844466788999999999999999998889999999999999999999988888999999999999999
Q ss_pred cccccCCcccccccccCceEEcccccCcccCCCCcc--cccccccCCCCcCCCCcccccccccccceeeccCccccccch
Q 001873 497 NHLVGGIPPSVVGCQSLEFLDLHSNGLTGSVPDTLP--TSLQLVDLSDNRLSGSLAHSIGSLTELSKLLLSKNQLSGRIP 574 (1001)
Q Consensus 497 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 574 (1001)
|.|..+.+.+..-+++|++|||++|+|+...+..+. ..++.|+|++|+|+..-...|..+++|++|||++|.|+..+.
T Consensus 303 NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IE 382 (873)
T KOG4194|consen 303 NAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIE 382 (873)
T ss_pred hhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEe
Confidence 999998899999999999999999999966565554 567789999999997777889999999999999999987554
Q ss_pred ---hhhhccccccEEecccccccCCCCCccccccchhhhhhcCCCcccccccccccccccccEEEecCCcCCCChhhhhc
Q 001873 575 ---AEILSCRKLILLDIGNNRFSGEIPKELGQISSLEISLNLSSNQFSGEIPSEFSGLTKLGILDLSHNKLSGDLDALAS 651 (1001)
Q Consensus 575 ---~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 651 (1001)
..|..+++|+.|++-+|+|....-..|..+..|+. |||.+|.|..+-|.+|..+ .|++|-+..-.+-||++.-+-
T Consensus 383 Daa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~-LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSssflCDCql~Wl 460 (873)
T KOG4194|consen 383 DAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEH-LDLGDNAIASIQPNAFEPM-ELKELVMNSSSFLCDCQLKWL 460 (873)
T ss_pred cchhhhccchhhhheeecCceeeecchhhhccCcccce-ecCCCCcceeecccccccc-hhhhhhhcccceEEeccHHHH
Confidence 35778999999999999999666678999999997 9999999999999999999 999999999999999887777
Q ss_pred ccccceeEcccCCCCCCCCCCccccCCCCCCCCCCCccc
Q 001873 652 LQNLVSLNVSFNDFSGELPNTPFFRKLPLSDLASNRGLY 690 (1001)
Q Consensus 652 l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc 690 (1001)
.+||.-..+.. .....|.-++.+......+.+...-.|
T Consensus 461 ~qWl~~~~lq~-sv~a~CayPe~Lad~~i~svd~~~lvC 498 (873)
T KOG4194|consen 461 AQWLYRRKLQS-SVIAKCAYPEPLADQSIVSVDTANLVC 498 (873)
T ss_pred HHHHHhccccc-ceeeeccCCcccccceeEeechhhcee
Confidence 78877666652 233344444444444444444333444
No 9
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-40 Score=361.10 Aligned_cols=200 Identities=38% Similarity=0.571 Sum_probs=175.4
Q ss_pred ccCCCeEeecCCeeEEEEEeCCCCEEEEEEecCCCc----hhhHHHHHHHhhccCCCceeeEEeeeecCC-ceEEEEEcc
Q 001873 768 LTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDE----SGAFSSEIQTLGSIRHKNIVRLLGWGSNKN-LKLLFYDYL 842 (1001)
Q Consensus 768 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~-~~~lv~e~~ 842 (1001)
....+.+|+|+||+||+|.++....||||++..... .++|.+|+.++++++|||||+++|+|.+.. ..++|||||
T Consensus 43 l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~ 122 (362)
T KOG0192|consen 43 LPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYM 122 (362)
T ss_pred hhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeC
Confidence 344456999999999999996544599999865331 358999999999999999999999999887 789999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC-eEEeCCCCCCeEECCCC-cEEEecccccccccCCCC
Q 001873 843 PNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPP-ILHGDVKAMNVLLGPGY-QAYLADFGLARIVSGSGD 920 (1001)
Q Consensus 843 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~-ivH~Dlkp~NIll~~~~-~~ki~Dfgla~~~~~~~~ 920 (1001)
++|+|.++++...+..+++..+.+++.|||+||+|||++ + ||||||||+|||++.++ ++||+|||+++......
T Consensus 123 ~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~- 198 (362)
T KOG0192|consen 123 PGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK- 198 (362)
T ss_pred CCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeecccc-
Confidence 999999999875566799999999999999999999998 7 99999999999999997 99999999998764321
Q ss_pred CCCCCCCCCCcccccccccCccccc--cCCCCCccchHHHHHHHHHHHhCCCCCCCCCC
Q 001873 921 DNCSKTNQRPQLAGSYGYMAPEHAS--MQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977 (1001)
Q Consensus 921 ~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~ 977 (1001)
...+...||++|||||++. ...|+.|+||||||+++|||+||+.||....+
T Consensus 199 ------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~ 251 (362)
T KOG0192|consen 199 ------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP 251 (362)
T ss_pred ------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH
Confidence 2233368999999999999 67999999999999999999999999998765
No 10
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-40 Score=347.04 Aligned_cols=200 Identities=25% Similarity=0.392 Sum_probs=174.2
Q ss_pred HHhcccCCCeEeecCCeeEEEEEe-CCCCEEEEEEecCCC---------chhhHHHHHHHhhccCCCceeeEEeeeecCC
Q 001873 764 VVRNLTSANVIGTGSSGVVYRVTI-PNGETLAVKKMWSSD---------ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKN 833 (1001)
Q Consensus 764 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---------~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~ 833 (1001)
+.+.|.+.+.+|+|+||.|-+|.. ++|++||||++.+.. ......+|+++|++++|||||++++++...+
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 567889999999999999999875 479999999985421 1134579999999999999999999999999
Q ss_pred ceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCC---CcEEEeccc
Q 001873 834 LKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPG---YQAYLADFG 910 (1001)
Q Consensus 834 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~---~~~ki~Dfg 910 (1001)
+.|||||||+||+|.+++-.. ..+.+...+.+++|++.|+.|||++ ||+||||||+|||+..+ ..+||+|||
T Consensus 250 s~YmVlE~v~GGeLfd~vv~n--k~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDFG 324 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVAN--KYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDFG 324 (475)
T ss_pred ceEEEEEEecCccHHHHHHhc--cccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEecccc
Confidence 999999999999999999764 3467777788999999999999999 99999999999999765 789999999
Q ss_pred ccccccCCCCCCCCCCCCCCcccccccccCccccccCCCC---CccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 911 LARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRIT---EKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 911 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~---~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
+|+... ....+.+.+|||.|.|||++.++.+. .++||||+||++|-+++|.+||.+..
T Consensus 325 lAK~~g--------~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~ 385 (475)
T KOG0615|consen 325 LAKVSG--------EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEY 385 (475)
T ss_pred hhhccc--------cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCccccc
Confidence 999863 34567788999999999999765543 47899999999999999999998754
No 11
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-39 Score=358.18 Aligned_cols=198 Identities=25% Similarity=0.397 Sum_probs=182.5
Q ss_pred hcccCCCeEeecCCeeEEEEEe-CCCCEEEEEEecC-----CCchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTI-PNGETLAVKKMWS-----SDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~-----~~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
++|...++||+|+|+.||.++. ..|+.||+|++.+ ....+...+||++.+.++|||||+++++|++.+..|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5699999999999999999997 7899999999854 345578999999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
|+|+.++|..++++ .+.+++.+++.+++||+.|+.|||+. +|+|||||..|++++++.++||+|||+|..+..+
T Consensus 98 ELC~~~sL~el~Kr--rk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~- 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLKR--RKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD- 171 (592)
T ss_pred EecCCccHHHHHHh--cCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecCc-
Confidence 99999999999985 56699999999999999999999998 9999999999999999999999999999987533
Q ss_pred CCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.....+.+|||.|.|||++....++..+||||+|||||-|+.|++||+..
T Consensus 172 ------~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk 221 (592)
T KOG0575|consen 172 ------GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETK 221 (592)
T ss_pred ------ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccc
Confidence 24456789999999999999999999999999999999999999999865
No 12
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=339.29 Aligned_cols=200 Identities=29% Similarity=0.378 Sum_probs=178.9
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEE
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLF 838 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv 838 (1001)
.+.|++.++||+|+||+||.++.+ +++.+|+|++++.. +.+...+|..++.+++||+||+++-.|++.+..|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 357899999999999999999865 58999999885432 346688899999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCC
Q 001873 839 YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGS 918 (1001)
Q Consensus 839 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~ 918 (1001)
+||+.||.|..++++. ..+++..+.-++.+|+.|+.|||++ +|||||+||+|||+|++|+++|+|||+++.....
T Consensus 104 ld~~~GGeLf~hL~~e--g~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~ 178 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQRE--GRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKD 178 (357)
T ss_pred EeccCCccHHHHHHhc--CCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhcccC
Confidence 9999999999999874 4589998888999999999999999 9999999999999999999999999999864322
Q ss_pred CCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 919 GDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 919 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
.....+.+||+.|||||++....|+.++|-||+|+++|||++|..||....
T Consensus 179 -------~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~ 229 (357)
T KOG0598|consen 179 -------GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED 229 (357)
T ss_pred -------CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc
Confidence 223345799999999999999999999999999999999999999998753
No 13
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.8e-41 Score=331.93 Aligned_cols=203 Identities=27% Similarity=0.392 Sum_probs=176.7
Q ss_pred HhcccCCCeEeecCCeeEEEEE-eCCCCEEEEEEecC----CCchhhHHHHHHHhhccCCCceeeEEee-eecC-CceEE
Q 001873 765 VRNLTSANVIGTGSSGVVYRVT-IPNGETLAVKKMWS----SDESGAFSSEIQTLGSIRHKNIVRLLGW-GSNK-NLKLL 837 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~----~~~~~~~~~Ei~~l~~l~h~nIv~l~~~-~~~~-~~~~l 837 (1001)
...|++.++||+|.||+||+++ ..+|..||.|++.- ..+.++...|+.++++++|||||+++++ +.++ ...+|
T Consensus 18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlni 97 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNI 97 (375)
T ss_pred HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHH
Confidence 4568899999999999999998 45899999998852 2234678899999999999999999994 3333 44789
Q ss_pred EEEccCCCCHHHHhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEEeCCCCCCeEECCCCcEEEecccccc
Q 001873 838 FYDYLPNGSLSSLLHG--AGKGGADWEARYEVVLGVAHALAYLHHDCMPP--ILHGDVKAMNVLLGPGYQAYLADFGLAR 913 (1001)
Q Consensus 838 v~e~~~~gsL~~~l~~--~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~--ivH~Dlkp~NIll~~~~~~ki~Dfgla~ 913 (1001)
|||||..|+|.+.++. .+.+.+++.++++++.|++.|+.++|++. +. |+||||||.||+++.+|.+|++|||+++
T Consensus 98 vmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r 176 (375)
T KOG0591|consen 98 VMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVMHRDIKPANIFLTANGVVKLGDFGLGR 176 (375)
T ss_pred HHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccc-cccceeeccCcchheEEcCCCceeeccchhHh
Confidence 9999999999999875 33556899999999999999999999942 24 8999999999999999999999999999
Q ss_pred cccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 914 IVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.+.. .+......+|||.||+||.+.+.+|+.+|||||+||++|||+.-+.||.+.
T Consensus 177 ~l~s-------~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~ 231 (375)
T KOG0591|consen 177 FLSS-------KTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD 231 (375)
T ss_pred Hhcc-------hhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc
Confidence 8853 345566789999999999999999999999999999999999999999875
No 14
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=6.8e-40 Score=328.12 Aligned_cols=218 Identities=26% Similarity=0.395 Sum_probs=187.6
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCch----hhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDES----GAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYD 840 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~----~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e 840 (1001)
++|+...++|+|+||.||+.+.+ +|+.||||++....+. +-..|||+++++++|||+|.++++|......++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 46888889999999999999977 5999999999655442 557799999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCC
Q 001873 841 YLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGD 920 (1001)
Q Consensus 841 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~ 920 (1001)
||+..-|.. +... ..+.+.+...++..|++.|+.|+|++ ++|||||||+|||++.+|.+|+||||.|+.+..++
T Consensus 82 ~~dhTvL~e-Le~~-p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg- 155 (396)
T KOG0593|consen 82 YCDHTVLHE-LERY-PNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSAPG- 155 (396)
T ss_pred ecchHHHHH-HHhc-cCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcCCc-
Confidence 998644444 4433 45689999999999999999999999 99999999999999999999999999999986432
Q ss_pred CCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcCcccchhhhhcccchhhhc
Q 001873 921 DNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLMLNLEAEQ 999 (1001)
Q Consensus 921 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~~~~~l~~~~~~~~~~~~~~~~~ 999 (1001)
...+..+.|++|+|||.+.+ ..|+.++||||+||++.||++|. +..|+..+++|.-.+....|+..+..
T Consensus 156 ------d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~----pL~PG~SDiDQLy~I~ktLG~L~prh 225 (396)
T KOG0593|consen 156 ------DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGE----PLWPGRSDIDQLYLIRKTLGNLIPRH 225 (396)
T ss_pred ------chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCC----cCCCCcchHHHHHHHHHHHcccCHHH
Confidence 23345689999999998866 89999999999999999999998 45567788888888888788776654
No 15
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=5.4e-39 Score=316.89 Aligned_cols=217 Identities=24% Similarity=0.364 Sum_probs=189.3
Q ss_pred hcccCCCeEeecCCeeEEEEEe-CCCCEEEEEEecCCCch----hhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTI-PNGETLAVKKMWSSDES----GAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYD 840 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~----~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e 840 (1001)
++|...+++|+|.||.||+|++ ++|+.||||+++..+.. ....|||+.++.++|+||+.++++|...+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 4688889999999999999985 57999999999765433 457899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCC
Q 001873 841 YLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGD 920 (1001)
Q Consensus 841 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~ 920 (1001)
||+ .+|+..+++. ...++..++..++.++++|++|+|++ .|+||||||.|+|++++|.+||+|||+|+.+.+...
T Consensus 82 fm~-tdLe~vIkd~-~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~ 156 (318)
T KOG0659|consen 82 FMP-TDLEVVIKDK-NIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR 156 (318)
T ss_pred ecc-ccHHHHhccc-ccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCCCc
Confidence 997 7999999875 55678999999999999999999998 999999999999999999999999999998864422
Q ss_pred CCCCCCCCCCcccccccccCcccc-ccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcCcccchhhhhcccchhhh
Q 001873 921 DNCSKTNQRPQLAGSYGYMAPEHA-SMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLMLNLEAE 998 (1001)
Q Consensus 921 ~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~~~~~l~~~~~~~~~~~~~~~~ 998 (1001)
..+..+-|.+|+|||.+ ..+.|+..+||||.|||+.||+-|. |.++|+.+++|..+++...|.+.++
T Consensus 157 -------~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~----P~fpG~sDidQL~~If~~LGTP~~~ 224 (318)
T KOG0659|consen 157 -------IQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRV----PFFPGDSDIDQLSKIFRALGTPTPD 224 (318)
T ss_pred -------ccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccC----CCCCCCchHHHHHHHHHHcCCCCcc
Confidence 22333789999999976 5588999999999999999999998 4567889999999998777755444
No 16
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=8e-39 Score=320.25 Aligned_cols=198 Identities=28% Similarity=0.394 Sum_probs=179.7
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc-----hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEE
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE-----SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLF 838 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv 838 (1001)
.++|+..+.||.|+||+|.+++.+ +|..+|+|++..... .+...+|..+++.+.||+++++++.+.+.+..++|
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence 356888999999999999999976 689999999865442 24567899999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCC
Q 001873 839 YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGS 918 (1001)
Q Consensus 839 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~ 918 (1001)
|||++||.|..++++.+ .+++..++-+|.||+.|++|||+. +|++||+||+|||+|++|++||+|||.|+.+..
T Consensus 123 meyv~GGElFS~Lrk~~--rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~- 196 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRKSG--RFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG- 196 (355)
T ss_pred EeccCCccHHHHHHhcC--CCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecC-
Confidence 99999999999999854 489999999999999999999998 999999999999999999999999999998642
Q ss_pred CCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCC
Q 001873 919 GDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977 (1001)
Q Consensus 919 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~ 977 (1001)
...+.+|||.|+|||++..++|+.++|-|||||++|||+.|++||....+
T Consensus 197 ---------rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~ 246 (355)
T KOG0616|consen 197 ---------RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP 246 (355)
T ss_pred ---------cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh
Confidence 24567999999999999999999999999999999999999999987654
No 17
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-40 Score=354.53 Aligned_cols=301 Identities=26% Similarity=0.284 Sum_probs=225.1
Q ss_pred ccccCCCCCceEeeecCcccCCCCcccCCCCCCcEEEcCCCcccccCCCCccCCCCCCEEeccCCCCCCCCCcccccccC
Q 001873 265 EEIGNCSELQNLYLYQNSISGPIPGRIGALSKLKSLLLWQNSLVGAIPDELGSCTELTVVDFSDNLLTGSIPRSFGNLLK 344 (1001)
Q Consensus 265 ~~l~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 344 (1001)
++++.++.|+.|||+.|.|+.+.-.+|..-.++++|+|++|.|+..--..|.++.+|..|.|++|+++...+..|.+|++
T Consensus 143 e~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~ 222 (873)
T KOG4194|consen 143 EELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPK 222 (873)
T ss_pred HHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcch
Confidence 34556677888888888888766677777778888888888888777777777888888888888888666667777888
Q ss_pred ccEEEcccccccCcCChhhccccccCEEeccCCcccCccCccccccCcccEEEeecCccCCCCCcccccCcccceEeCcC
Q 001873 345 LQELQLSVNQLSGTIPIEIATCTALTHLEIDNNAISGEIPADIGNINGLTLFFAWKNKLTGNIPESLSQCQELQALDFSY 424 (1001)
Q Consensus 345 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~ 424 (1001)
|+.|+|..|+|.-..-..|.++++|+.|.|..|.|+. ..-..|..+.++++|+|+.
T Consensus 223 L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~k------------------------L~DG~Fy~l~kme~l~L~~ 278 (873)
T KOG4194|consen 223 LESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISK------------------------LDDGAFYGLEKMEHLNLET 278 (873)
T ss_pred hhhhhccccceeeehhhhhcCchhhhhhhhhhcCccc------------------------ccCcceeeecccceeeccc
Confidence 8888888887764334566677777777777666653 3334566777788888888
Q ss_pred ccccCCCCcccccccccceEEccCCcCCCCCCCCCCCCCCcceEEccccccccCCCcccCCCCCcceeeccCcccccCCc
Q 001873 425 NNLSGPIPKEIFGLRNLTKLLLLSNDLSGFIPPDIGNCTTLRRLRLNDNRLSGTIPSEMGNLKHLNFVDMSENHLVGGIP 504 (1001)
Q Consensus 425 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 504 (1001)
|+++..-..++++++.|+.|+|++|.|..+.++.+..+++|++|+|++|+|+...+..|..|..|+.|+|++|.++...-
T Consensus 279 N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e 358 (873)
T KOG4194|consen 279 NRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAE 358 (873)
T ss_pred chhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHh
Confidence 88887777788888888888888888888888888888888888888888888888888888888888888888887777
Q ss_pred ccccccccCceEEcccccCcccCCCCcccccccccCCCCcCCCCcccccccccccceeeccCccccccchhhhhcccccc
Q 001873 505 PSVVGCQSLEFLDLHSNGLTGSVPDTLPTSLQLVDLSDNRLSGSLAHSIGSLTELSKLLLSKNQLSGRIPAEILSCRKLI 584 (1001)
Q Consensus 505 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 584 (1001)
..|..+++|+.|||++|.|++.+.++ ...|.+++.|++|+|.+|+|..+...+|.+++.|+
T Consensus 359 ~af~~lssL~~LdLr~N~ls~~IEDa-------------------a~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE 419 (873)
T KOG4194|consen 359 GAFVGLSSLHKLDLRSNELSWCIEDA-------------------AVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALE 419 (873)
T ss_pred hHHHHhhhhhhhcCcCCeEEEEEecc-------------------hhhhccchhhhheeecCceeeecchhhhccCcccc
Confidence 78888888888888888888665542 22455566666666666666655555666666666
Q ss_pred EEecccccccCCCCCccccccchhh
Q 001873 585 LLDIGNNRFSGEIPKELGQISSLEI 609 (1001)
Q Consensus 585 ~L~Ls~N~l~~~~p~~~~~l~~L~~ 609 (1001)
+|||.+|.|...-|+.|..+ .|+.
T Consensus 420 ~LdL~~NaiaSIq~nAFe~m-~Lk~ 443 (873)
T KOG4194|consen 420 HLDLGDNAIASIQPNAFEPM-ELKE 443 (873)
T ss_pred eecCCCCcceeecccccccc-hhhh
Confidence 66666666666666666665 5543
No 18
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.6e-38 Score=339.88 Aligned_cols=219 Identities=26% Similarity=0.341 Sum_probs=187.4
Q ss_pred HhcccCCCeEeecCCeeEEEEEe-CCCCEEEEEEecCCCch----hhHHHHHHHhhccCCCceeeEEeeeecC--CceEE
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTI-PNGETLAVKKMWSSDES----GAFSSEIQTLGSIRHKNIVRLLGWGSNK--NLKLL 837 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~----~~~~~Ei~~l~~l~h~nIv~l~~~~~~~--~~~~l 837 (1001)
.+.|+.+++||+|.||.||+|+. .+|+.||+|++.-+.+. .-..|||.++++++||||+++.+...+. +.+|+
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 34677788999999999999985 57999999999655433 4567899999999999999999976655 78999
Q ss_pred EEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccC
Q 001873 838 FYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSG 917 (1001)
Q Consensus 838 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~ 917 (1001)
|+|||+ -||.-++... .-.+++.++..++.|++.|++|+|++ +|+|||||.+|||||.+|.+||+|||+|+++..
T Consensus 196 VFeYMd-hDL~GLl~~p-~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~ 270 (560)
T KOG0600|consen 196 VFEYMD-HDLSGLLSSP-GVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFYTP 270 (560)
T ss_pred EEeccc-chhhhhhcCC-CcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeeccC
Confidence 999998 5898888754 34689999999999999999999999 999999999999999999999999999998765
Q ss_pred CCCCCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcCcccchhhhhcccchh
Q 001873 918 SGDDNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLMLNLE 996 (1001)
Q Consensus 918 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~~~~~l~~~~~~~~~~~~~~ 996 (1001)
.. ....+..+-|.+|+|||.+.+ ..|+.++|+||.||||.||++|++.|. +..++.|..+++.+.|.+.
T Consensus 271 ~~------~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~----G~tEveQl~kIfklcGSP~ 340 (560)
T KOG0600|consen 271 SG------SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQ----GRTEVEQLHKIFKLCGSPT 340 (560)
T ss_pred CC------CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcC----CccHHHHHHHHHHHhCCCC
Confidence 43 223566788999999998765 789999999999999999999996555 5567888888888888666
Q ss_pred hh
Q 001873 997 AE 998 (1001)
Q Consensus 997 ~~ 998 (1001)
++
T Consensus 341 e~ 342 (560)
T KOG0600|consen 341 ED 342 (560)
T ss_pred hh
Confidence 54
No 19
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-41 Score=379.50 Aligned_cols=503 Identities=30% Similarity=0.347 Sum_probs=365.0
Q ss_pred EeccCCcccCCCCcccCCccccccccccCCccCCCCChh-hhcccccceEEccCCcccCCCCccccCCccccceeccccc
Q 001873 107 LIISSCNLTGTIPKEFGDYRELTFIDLSGNSLWGEIPTE-VCRLRKLESLYLNTNLLEGEIPSDIGNLSSLAYLTLYDNQ 185 (1001)
Q Consensus 107 L~l~~~~l~g~~p~~~~~l~~L~~L~Ls~n~l~g~~p~~-~~~l~~L~~L~L~~n~l~~~ip~~l~~L~~L~~L~L~~n~ 185 (1001)
+|++..+++ .||..+..-..++.|+++.|.+. ..|-+ +.+.-+|+.|||++|+++ ..|..+..+.+|+.|+++.|.
T Consensus 3 vd~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l-~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~ 79 (1081)
T KOG0618|consen 3 VDASDEQLE-LIPEQILNNEALQILNLRRNSLL-SRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNY 79 (1081)
T ss_pred cccccccCc-ccchhhccHHHHHhhhccccccc-cCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhh
Confidence 466667776 77777766666888888888876 44433 334555899999988887 788888888999999999988
Q ss_pred cccccCCCccchhhhhhhhhccCcCCCCCCCcccccCccchhccccccccccccCCccccccccceeccccccccccCcc
Q 001873 186 LSGKIPKSIGALSKLQVFRAGGNQNLKGELPWEIGNCSNLVMLGLAETSISGNVPSSIGMLERIQTIAIYTSLLSGPIPE 265 (1001)
Q Consensus 186 l~g~~p~~~~~l~~L~~L~l~~n~~l~~~lp~~l~~l~~L~~L~l~~~~l~~~~p~~i~~l~~L~~L~l~~n~l~g~ip~ 265 (1001)
+. .+|.+++++.+|++|.|.+|. ...+|.++..+++|++|+++.|.+. .+|.
T Consensus 80 i~-~vp~s~~~~~~l~~lnL~~n~--l~~lP~~~~~lknl~~LdlS~N~f~-------------------------~~Pl 131 (1081)
T KOG0618|consen 80 IR-SVPSSCSNMRNLQYLNLKNNR--LQSLPASISELKNLQYLDLSFNHFG-------------------------PIPL 131 (1081)
T ss_pred Hh-hCchhhhhhhcchhheeccch--hhcCchhHHhhhcccccccchhccC-------------------------CCch
Confidence 88 788888888888888888873 3357777777777777777765544 6777
Q ss_pred cccCCCCCceEeeecCcccCCCCcccCCCCCCcEEEcCCCcccccCCCCccCCCCCCEEeccCCCCCCCCCcccccccCc
Q 001873 266 EIGNCSELQNLYLYQNSISGPIPGRIGALSKLKSLLLWQNSLVGAIPDELGSCTELTVVDFSDNLLTGSIPRSFGNLLKL 345 (1001)
Q Consensus 266 ~l~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 345 (1001)
.+..++.++.+..++|.... .++... .+.++|..|.+.+.++..+.+++. .|||.+|.+. . -.+.++.+|
T Consensus 132 ~i~~lt~~~~~~~s~N~~~~----~lg~~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~-~--~dls~~~~l 201 (1081)
T KOG0618|consen 132 VIEVLTAEEELAASNNEKIQ----RLGQTS-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME-V--LDLSNLANL 201 (1081)
T ss_pred hHHhhhHHHHHhhhcchhhh----hhcccc-chhhhhhhhhcccchhcchhhhhe--eeecccchhh-h--hhhhhccch
Confidence 77777777788888772221 222222 777788888888777777777666 6888888876 2 235567788
Q ss_pred cEEEcccccccCcCChhhccccccCEEeccCCcccCccCccccccCcccEEEeecCccCCCCCcccccCcccceEeCcCc
Q 001873 346 QELQLSVNQLSGTIPIEIATCTALTHLEIDNNAISGEIPADIGNINGLTLFFAWKNKLTGNIPESLSQCQELQALDFSYN 425 (1001)
Q Consensus 346 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N 425 (1001)
+.|....|+++.. ....++|+.|+.++|.++...+ -..-.+|+++++++|+++ .+|++++.+.+|+.++..+|
T Consensus 202 ~~l~c~rn~ls~l----~~~g~~l~~L~a~~n~l~~~~~--~p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N 274 (1081)
T KOG0618|consen 202 EVLHCERNQLSEL----EISGPSLTALYADHNPLTTLDV--HPVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHN 274 (1081)
T ss_pred hhhhhhhcccceE----EecCcchheeeeccCcceeecc--ccccccceeeecchhhhh-cchHHHHhcccceEecccch
Confidence 8888888887632 2244678888888888762222 223367788888888887 44588888888888888888
Q ss_pred cccCCCCcccccccccceEEccCCcCCCCCCCCCCCCCCcceEEccccccccCCCcccCCCCC-cceeeccCcccccCCc
Q 001873 426 NLSGPIPKEIFGLRNLTKLLLLSNDLSGFIPPDIGNCTTLRRLRLNDNRLSGTIPSEMGNLKH-LNFVDMSENHLVGGIP 504 (1001)
Q Consensus 426 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p 504 (1001)
+++ .+|..+..+++|+.|.+.+|++. .+|+....++.|+.|+|..|+|....+..+.-+.. |+.|+.+.|++....-
T Consensus 275 ~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~ 352 (1081)
T KOG0618|consen 275 RLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPS 352 (1081)
T ss_pred hHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhcccccccc
Confidence 885 67778888888888888888887 55667777888888888888887444444444443 7777777777764332
Q ss_pred ccccccccCceEEcccccCcccCCCCc--ccccccccCCCCcCCCCcccccccccccceeeccCccccccchhhhhcccc
Q 001873 505 PSVVGCQSLEFLDLHSNGLTGSVPDTL--PTSLQLVDLSDNRLSGSLAHSIGSLTELSKLLLSKNQLSGRIPAEILSCRK 582 (1001)
Q Consensus 505 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~--~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 582 (1001)
..=...+.|+.|++.+|+|+...-..+ ...|+.|+|++|+|.......+.++..|++|+||+|+|+ .+|+++..+..
T Consensus 353 ~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~ 431 (1081)
T KOG0618|consen 353 YEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGR 431 (1081)
T ss_pred ccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhh
Confidence 222235677788888888875332222 356777888888887666777788888888888888888 77888888888
Q ss_pred ccEEecccccccCCCCCccccccchhhhhhcCCCcccccccccccccccccEEEecCCcCC-CChhhhhcccccceeEcc
Q 001873 583 LILLDIGNNRFSGEIPKELGQISSLEISLNLSSNQFSGEIPSEFSGLTKLGILDLSHNKLS-GDLDALASLQNLVSLNVS 661 (1001)
Q Consensus 583 L~~L~Ls~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~l~~L~~L~ls 661 (1001)
|++|...+|++. ..| ++.+++.|++ +|+|.|+|+...-..-..-++|++|||++|... -+...+..+..+...+++
T Consensus 432 L~tL~ahsN~l~-~fP-e~~~l~qL~~-lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~~i~ 508 (1081)
T KOG0618|consen 432 LHTLRAHSNQLL-SFP-ELAQLPQLKV-LDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRLVFDHKTLKVLKSLSQMDIT 508 (1081)
T ss_pred hHHHhhcCCcee-ech-hhhhcCcceE-EecccchhhhhhhhhhCCCcccceeeccCCcccccchhhhHHhhhhhheecc
Confidence 888888888887 667 7888888887 888888888654333333378899999998843 366777778888888877
Q ss_pred cC
Q 001873 662 FN 663 (1001)
Q Consensus 662 ~N 663 (1001)
-|
T Consensus 509 ~~ 510 (1081)
T KOG0618|consen 509 LN 510 (1081)
T ss_pred cC
Confidence 66
No 20
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-38 Score=346.49 Aligned_cols=201 Identities=28% Similarity=0.442 Sum_probs=176.6
Q ss_pred cccCCCeEeecCCeeEEEEEeCCCCEEEEEEecCCCc-hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCCC
Q 001873 767 NLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDE-SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNG 845 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 845 (1001)
.++.++.||+|.||+||.|++.....||+|.++.... .++|.+|+++|++++|++||+++|+|..++.++||||||+.|
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~G 286 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKG 286 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccC
Confidence 4556778999999999999998777999999977543 488999999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCCC
Q 001873 846 SLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSK 925 (1001)
Q Consensus 846 sL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~ 925 (1001)
+|.+|++..+...+...+...++.|||+||+||+++ ++|||||.++||||+++..+||+|||+|+.+..+. +. ..
T Consensus 287 sLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~-Y~-~~ 361 (468)
T KOG0197|consen 287 SLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDE-YT-AS 361 (468)
T ss_pred cHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCCCc-ee-ec
Confidence 999999986667789999999999999999999999 99999999999999999999999999999543222 11 11
Q ss_pred CCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 926 TNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 926 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
.. ..-...|.|||.+....++.|||||||||+||||+| |+.|+..+.
T Consensus 362 ~~----~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~ms 409 (468)
T KOG0197|consen 362 EG----GKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMS 409 (468)
T ss_pred CC----CCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCC
Confidence 11 123357999999999999999999999999999999 999988764
No 21
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-38 Score=338.90 Aligned_cols=206 Identities=25% Similarity=0.400 Sum_probs=181.1
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecC-----CCchhhHHHHHHHhhcc-CCCceeeEEeeeecCCceEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWS-----SDESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLF 838 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~-----~~~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~~~~~lv 838 (1001)
.+|...++||+|+|++|++|+.. .++.||||++.+ +...+.+.+|-.+|.++ .||.|++++..|+++..+|+|
T Consensus 73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFv 152 (604)
T KOG0592|consen 73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFV 152 (604)
T ss_pred hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEE
Confidence 46888899999999999999854 699999998743 33346788899999999 899999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCC
Q 001873 839 YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGS 918 (1001)
Q Consensus 839 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~ 918 (1001)
+||+++|+|.++|++.+ .+++...+.++.+|+.|++|||+. |||||||||+|||+|+||++||+|||.|+.+.+.
T Consensus 153 Le~A~nGdll~~i~K~G--sfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~ 227 (604)
T KOG0592|consen 153 LEYAPNGDLLDLIKKYG--SFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAKILSPS 227 (604)
T ss_pred EEecCCCcHHHHHHHhC--cchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccccCChh
Confidence 99999999999999864 489999999999999999999998 9999999999999999999999999999998764
Q ss_pred CCC------CCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 919 GDD------NCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 919 ~~~------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
... .......+...+||..|.+||++.....++.+|+|+||||+|+|+.|.+||.+..
T Consensus 228 ~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~N 291 (604)
T KOG0592|consen 228 QKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAAN 291 (604)
T ss_pred hccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcccc
Confidence 322 1112222366899999999999999999999999999999999999999997653
No 22
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-39 Score=340.60 Aligned_cols=216 Identities=23% Similarity=0.329 Sum_probs=189.8
Q ss_pred HHHHhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCch---hhHHHHHHHhhccC-CCceeeEEeeeecCC-ce
Q 001873 762 DDVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDES---GAFSSEIQTLGSIR-HKNIVRLLGWGSNKN-LK 835 (1001)
Q Consensus 762 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~Ei~~l~~l~-h~nIv~l~~~~~~~~-~~ 835 (1001)
-.+.++|+..++||.|+||+||+|+.. +++.||||+++..-.. ..-.||++.++++. |||||++.+++.+.+ ..
T Consensus 6 ~~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L 85 (538)
T KOG0661|consen 6 VIFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRIL 85 (538)
T ss_pred hhHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceE
Confidence 346789999999999999999999854 6899999998765433 34668999999998 999999999998887 99
Q ss_pred EEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccc
Q 001873 836 LLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIV 915 (1001)
Q Consensus 836 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~ 915 (1001)
++|||||+ .+|++.+++. ++.+++.+++.|+.||++||+|+|.+ |+.|||+||+|||+.....+||+|||+|+.+
T Consensus 86 ~fVfE~Md-~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev 160 (538)
T KOG0661|consen 86 YFVFEFMD-CNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREV 160 (538)
T ss_pred eeeHHhhh-hhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccccccccc
Confidence 99999997 6999999987 77899999999999999999999999 9999999999999999999999999999987
Q ss_pred cCCCCCCCCCCCCCCcccccccccCcccc-ccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcCcccchhhhhcccc
Q 001873 916 SGSGDDNCSKTNQRPQLAGSYGYMAPEHA-SMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLMLN 994 (1001)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~~~~~l~~~~~~~~~~~~ 994 (1001)
... ...+..+.|++|+|||++ +...|+.+.||||+|||++|+.+-+ +.+||..+++|..++-..+|.
T Consensus 161 ~Sk--------pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLr----PLFPG~sE~Dqi~KIc~VLGt 228 (538)
T KOG0661|consen 161 RSK--------PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLR----PLFPGASEIDQIYKICEVLGT 228 (538)
T ss_pred ccC--------CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhc----ccCCCCcHHHHHHHHHHHhCC
Confidence 532 334556899999999986 5688899999999999999999987 577788888888888766663
No 23
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-37 Score=329.54 Aligned_cols=200 Identities=29% Similarity=0.481 Sum_probs=165.5
Q ss_pred HhcccCCCeEeecCCeeEEEEEeCCCCEEEEEEecCCCchhhHHHHHHHhh--ccCCCceeeEEeeeecCC----ceEEE
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLG--SIRHKNIVRLLGWGSNKN----LKLLF 838 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~Ei~~l~--~l~h~nIv~l~~~~~~~~----~~~lv 838 (1001)
.+..+..+.+|+|.||+||||+. +++.||||++.. .+.+.|.+|-.+.+ .|+|+||++|+++..... .+++|
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL-~~~~VAVKifp~-~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV 286 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQL-DNRLVAVKIFPE-QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV 286 (534)
T ss_pred CCchhhHHHhhcCccceeehhhc-cCceeEEEecCH-HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence 34566677899999999999998 469999999843 34556776666654 568999999999876555 88999
Q ss_pred EEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCC------CCCeEEeCCCCCCeEECCCCcEEEeccccc
Q 001873 839 YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDC------MPPILHGDVKAMNVLLGPGYQAYLADFGLA 912 (1001)
Q Consensus 839 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~------~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla 912 (1001)
+||.+.|+|.+|++. ...+|....+|+..+++||+|||+.. .|+|+|||||++|||+.+|+++.|+|||+|
T Consensus 287 t~fh~kGsL~dyL~~---ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLA 363 (534)
T KOG3653|consen 287 TEFHPKGSLCDYLKA---NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLA 363 (534)
T ss_pred eeeccCCcHHHHHHh---ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecccee
Confidence 999999999999985 45899999999999999999999863 478999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCCCCCcccccccccCccccccCC------CCCccchHHHHHHHHHHHhCCCCCCC
Q 001873 913 RIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQR------ITEKSDVYSFGVVLLEVLTGRHPLDP 974 (1001)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~Dv~SlG~il~elltg~~Pf~~ 974 (1001)
..+.+.... ......+||.+|||||++.+.- .-.+.||||+|.++|||+++..-+++
T Consensus 364 l~~~p~~~~-----~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~ 426 (534)
T KOG3653|consen 364 LRLEPGKPQ-----GDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADP 426 (534)
T ss_pred EEecCCCCC-----cchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccC
Confidence 998754322 2223369999999999986632 22478999999999999998766543
No 24
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=2.1e-38 Score=340.64 Aligned_cols=196 Identities=32% Similarity=0.436 Sum_probs=177.1
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYD 840 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e 840 (1001)
++|.+.+.||+|+||+||||+.+ +.+.||+|.+.+.. +.+.+.+|++++++++|||||.++++|+...+.|+|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 46777888999999999999865 68899999885433 23568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCC
Q 001873 841 YLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGD 920 (1001)
Q Consensus 841 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~ 920 (1001)
|+.| +|..++.+. +.++++.++.++.+++.|+.|||+. +|+|||+||+||+++..|++|+||||+|+.+..
T Consensus 82 ~a~g-~L~~il~~d--~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~--- 152 (808)
T KOG0597|consen 82 YAVG-DLFTILEQD--GKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMST--- 152 (808)
T ss_pred hhhh-hHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhccc---
Confidence 9985 999999875 4499999999999999999999998 999999999999999999999999999998753
Q ss_pred CCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCC
Q 001873 921 DNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974 (1001)
Q Consensus 921 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~ 974 (1001)
.+...+.+.|||-|||||...+++|+..+|+||+|||+||+++|++||-.
T Consensus 153 ----~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a 202 (808)
T KOG0597|consen 153 ----NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA 202 (808)
T ss_pred ----CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH
Confidence 34455667899999999999999999999999999999999999999964
No 25
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=3e-37 Score=313.34 Aligned_cols=218 Identities=28% Similarity=0.336 Sum_probs=188.4
Q ss_pred HHhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCchh----hHHHHHHHhhccCCCceeeEEeeee--cCCceE
Q 001873 764 VVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESG----AFSSEIQTLGSIRHKNIVRLLGWGS--NKNLKL 836 (1001)
Q Consensus 764 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~Ei~~l~~l~h~nIv~l~~~~~--~~~~~~ 836 (1001)
-+++|+....|++|+||.||+|+++ +++.||+|+++.+.+.. --.|||.++.+++|||||.+-++.. +-+..|
T Consensus 74 sv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy 153 (419)
T KOG0663|consen 74 SVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIY 153 (419)
T ss_pred cHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceee
Confidence 3567888999999999999999975 68999999998766553 3579999999999999999998764 445789
Q ss_pred EEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEeccccccccc
Q 001873 837 LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVS 916 (1001)
Q Consensus 837 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~ 916 (1001)
+|||||+ .+|...++... ..+...+++.++.|+++|++|||+. .|+||||||+|+|+...|.+||+|||+|+.+.
T Consensus 154 ~VMe~~E-hDLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 154 IVMEYVE-HDLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREYG 228 (419)
T ss_pred eeHHHHH-hhHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhhc
Confidence 9999997 69999998764 5688899999999999999999998 99999999999999999999999999999886
Q ss_pred CCCCCCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcCcccchhhhhcccch
Q 001873 917 GSGDDNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLMLNL 995 (1001)
Q Consensus 917 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~~~~~l~~~~~~~~~~~~~ 995 (1001)
.+ ....+..+-|.+|+|||.+.+ ..|+.+.||||+|||+.|+++++ |.++|...++|..+++..+|-+
T Consensus 229 sp-------~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~k----Plf~G~sE~dQl~~If~llGtP 297 (419)
T KOG0663|consen 229 SP-------LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQK----PLFPGKSEIDQLDKIFKLLGTP 297 (419)
T ss_pred CC-------cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcC----CCCCCCchHHHHHHHHHHhCCC
Confidence 43 334566788999999998765 67999999999999999999999 4667778888888887777754
Q ss_pred hh
Q 001873 996 EA 997 (1001)
Q Consensus 996 ~~ 997 (1001)
.+
T Consensus 298 te 299 (419)
T KOG0663|consen 298 SE 299 (419)
T ss_pred cc
Confidence 43
No 26
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-37 Score=322.45 Aligned_cols=224 Identities=29% Similarity=0.426 Sum_probs=185.3
Q ss_pred HHHHhcccCCCeEeecCCeeEEEEEeCCCCEEEEEEecCCCchhhHH-HHHHHhhccCCCceeeEEeeeecCC----ceE
Q 001873 762 DDVVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFS-SEIQTLGSIRHKNIVRLLGWGSNKN----LKL 836 (1001)
Q Consensus 762 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~-~Ei~~l~~l~h~nIv~l~~~~~~~~----~~~ 836 (1001)
..+.++.++.+.||+|.||+||+|+| .|+.||||+|.+.++...|. .||..-..++|+||+.|++....+. ..|
T Consensus 207 RTiarqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLw 285 (513)
T KOG2052|consen 207 RTIARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLW 285 (513)
T ss_pred HhhhheeEEEEEecCccccceeeccc-cCCceEEEEecccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEE
Confidence 34557788899999999999999999 59999999998776654443 4666667789999999999764332 679
Q ss_pred EEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhC-----CCCCeEEeCCCCCCeEECCCCcEEEecccc
Q 001873 837 LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHD-----CMPPILHGDVKAMNVLLGPGYQAYLADFGL 911 (1001)
Q Consensus 837 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~-----~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgl 911 (1001)
+|.+|.+.|||+||+.+ ..++.+..+++++.+|.||++||.+ ..|.|.|||||++|||+..++.+.|+|+|+
T Consensus 286 LvTdYHe~GSL~DyL~r---~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGL 362 (513)
T KOG2052|consen 286 LVTDYHEHGSLYDYLNR---NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 362 (513)
T ss_pred EeeecccCCcHHHHHhh---ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeecee
Confidence 99999999999999985 4589999999999999999999975 458999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCCCCCcccccccccCccccccC----CC--CCccchHHHHHHHHHHHhC----------CCCCCCC
Q 001873 912 ARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ----RI--TEKSDVYSFGVVLLEVLTG----------RHPLDPT 975 (1001)
Q Consensus 912 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~--~~~~Dv~SlG~il~elltg----------~~Pf~~~ 975 (1001)
|.......+.-. ......+||.+|||||++... .+ -..+||||||.|+||+..+ ..||.+.
T Consensus 363 Av~h~~~t~~id---i~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~ 439 (513)
T KOG2052|consen 363 AVRHDSDTDTID---IPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDV 439 (513)
T ss_pred eEEecccCCccc---CCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccC
Confidence 988766544332 344556999999999998542 22 2578999999999999763 4689988
Q ss_pred CCCCcCcccchhhhhcc
Q 001873 976 LPGGAPLVQWTPLMFLM 992 (1001)
Q Consensus 976 ~~~~~~l~~~~~~~~~~ 992 (1001)
.+.+....+.++++...
T Consensus 440 Vp~DPs~eeMrkVVCv~ 456 (513)
T KOG2052|consen 440 VPSDPSFEEMRKVVCVQ 456 (513)
T ss_pred CCCCCCHHHHhcceeec
Confidence 88888888888887543
No 27
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=2.7e-36 Score=326.12 Aligned_cols=218 Identities=24% Similarity=0.341 Sum_probs=183.8
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEE
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLF 838 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv 838 (1001)
.++|++.++||+|+||+||+++-+ +|+.+|+|++++.. +.+.+..|=.+|...++|+||+++..|++.++.|+|
T Consensus 140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLi 219 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLI 219 (550)
T ss_pred cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEE
Confidence 467899999999999999999865 69999999986543 335677899999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCC
Q 001873 839 YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGS 918 (1001)
Q Consensus 839 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~ 918 (1001)
|||++||+...+|... ..+++..++.++.+++.|++-+|+. |+|||||||+|+|||..|++|++|||++.-+...
T Consensus 220 MEylPGGD~mTLL~~~--~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~ 294 (550)
T KOG0605|consen 220 MEYLPGGDMMTLLMRK--DTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKK 294 (550)
T ss_pred EEecCCccHHHHHHhc--CcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchhhhh
Confidence 9999999999999874 4588888899999999999999998 9999999999999999999999999998644220
Q ss_pred -------------------CCCCCCC------C---------------CCCCcccccccccCccccccCCCCCccchHHH
Q 001873 919 -------------------GDDNCSK------T---------------NQRPQLAGSYGYMAPEHASMQRITEKSDVYSF 958 (1001)
Q Consensus 919 -------------------~~~~~~~------~---------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~Sl 958 (1001)
....... . ......+|||.|||||++.+..|+..+|.||+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSL 374 (550)
T KOG0605|consen 295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSL 374 (550)
T ss_pred hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHH
Confidence 0000000 0 01234689999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCC--cCcccchh
Q 001873 959 GVVLLEVLTGRHPLDPTLPGG--APLVQWTP 987 (1001)
Q Consensus 959 G~il~elltg~~Pf~~~~~~~--~~l~~~~~ 987 (1001)
|||||||+.|.+||....+.+ ..+..|..
T Consensus 375 G~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~ 405 (550)
T KOG0605|consen 375 GCIMYEMLVGYPPFCSETPQETYRKIVNWRE 405 (550)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhh
Confidence 999999999999999876544 35555554
No 28
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-38 Score=361.91 Aligned_cols=480 Identities=29% Similarity=0.330 Sum_probs=394.3
Q ss_pred cccccCCccCCCCChhhhcccccceEEccCCcccCCCC-ccccCCccccceeccccccccccCCCccchhhhhhhhhccC
Q 001873 130 FIDLSGNSLWGEIPTEVCRLRKLESLYLNTNLLEGEIP-SDIGNLSSLAYLTLYDNQLSGKIPKSIGALSKLQVFRAGGN 208 (1001)
Q Consensus 130 ~L~Ls~n~l~g~~p~~~~~l~~L~~L~L~~n~l~~~ip-~~l~~L~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~n 208 (1001)
.+|.|..++. .||..+..-..|+.|+++.|.+- ..| +.+.+.-+|+.|||++|+++ ..|..|..+.+|+.|+++.|
T Consensus 2 ~vd~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l-~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n 78 (1081)
T KOG0618|consen 2 HVDASDEQLE-LIPEQILNNEALQILNLRRNSLL-SRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRN 78 (1081)
T ss_pred CcccccccCc-ccchhhccHHHHHhhhccccccc-cCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchh
Confidence 4788888888 89988877777999999999876 444 34455566999999999997 89999999999999999988
Q ss_pred cCCCCCCCcccccCccchhccccccccccccCCccccccccceeccccccccccCcccccCCCCCceEeeecCcccCCCC
Q 001873 209 QNLKGELPWEIGNCSNLVMLGLAETSISGNVPSSIGMLERIQTIAIYTSLLSGPIPEEIGNCSELQNLYLYQNSISGPIP 288 (1001)
Q Consensus 209 ~~l~~~lp~~l~~l~~L~~L~l~~~~l~~~~p~~i~~l~~L~~L~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~i~~~~p 288 (1001)
. -..+|.+++++++|++|.|.. |.+. ..|.++..+.+|+.|+++.|++. .+|
T Consensus 79 ~--i~~vp~s~~~~~~l~~lnL~~------------------------n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~P 130 (1081)
T KOG0618|consen 79 Y--IRSVPSSCSNMRNLQYLNLKN------------------------NRLQ-SLPASISELKNLQYLDLSFNHFG-PIP 130 (1081)
T ss_pred h--HhhCchhhhhhhcchhheecc------------------------chhh-cCchhHHhhhcccccccchhccC-CCc
Confidence 2 235566666666666666655 4443 68999999999999999999997 889
Q ss_pred cccCCCCCCcEEEcCCCcccccCCCCccCCCCCCEEeccCCCCCCCCCcccccccCccEEEcccccccCcCChhhccccc
Q 001873 289 GRIGALSKLKSLLLWQNSLVGAIPDELGSCTELTVVDFSDNLLTGSIPRSFGNLLKLQELQLSVNQLSGTIPIEIATCTA 368 (1001)
Q Consensus 289 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 368 (1001)
..+..++.+..+..++|..... ++... ++.++|..|.+.+.++..+..+.. .|+|++|.+. -.....+.+
T Consensus 131 l~i~~lt~~~~~~~s~N~~~~~----lg~~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~---~~dls~~~~ 200 (1081)
T KOG0618|consen 131 LVIEVLTAEEELAASNNEKIQR----LGQTS-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME---VLDLSNLAN 200 (1081)
T ss_pred hhHHhhhHHHHHhhhcchhhhh----hcccc-chhhhhhhhhcccchhcchhhhhe--eeecccchhh---hhhhhhccc
Confidence 9999999999999999933222 33333 889999999999998888877776 7999999986 345678899
Q ss_pred cCEEeccCCcccCccCccccccCcccEEEeecCccCCCCCcccccCcccceEeCcCccccCCCCcccccccccceEEccC
Q 001873 369 LTHLEIDNNAISGEIPADIGNINGLTLFFAWKNKLTGNIPESLSQCQELQALDFSYNNLSGPIPKEIFGLRNLTKLLLLS 448 (1001)
Q Consensus 369 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 448 (1001)
|+.|....|+++... -.-++|+.|+..+|.++...+. ..-.+|+++++++|+++ .+|+++..+.+|+.+...+
T Consensus 201 l~~l~c~rn~ls~l~----~~g~~l~~L~a~~n~l~~~~~~--p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~ 273 (1081)
T KOG0618|consen 201 LEVLHCERNQLSELE----ISGPSLTALYADHNPLTTLDVH--PVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANH 273 (1081)
T ss_pred hhhhhhhhcccceEE----ecCcchheeeeccCcceeeccc--cccccceeeecchhhhh-cchHHHHhcccceEecccc
Confidence 999999999987322 2347899999999999843332 22358999999999999 5679999999999999999
Q ss_pred CcCCCCCCCCCCCCCCcceEEccccccccCCCcccCCCCCcceeeccCcccccCCcccccccc-cCceEEcccccCcccC
Q 001873 449 NDLSGFIPPDIGNCTTLRRLRLNDNRLSGTIPSEMGNLKHLNFVDMSENHLVGGIPPSVVGCQ-SLEFLDLHSNGLTGSV 527 (1001)
Q Consensus 449 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~ 527 (1001)
|+++ .+|..+...++|+.|++..|.++ -+|.....++.|+.|+|..|+|....+..+.-.. +|+.|+.+.|++.. .
T Consensus 274 N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~-l 350 (1081)
T KOG0618|consen 274 NRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLST-L 350 (1081)
T ss_pred hhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccc-c
Confidence 9996 77888999999999999999999 7888889999999999999999854444444443 37889999999873 3
Q ss_pred CC---CcccccccccCCCCcCCCCcccccccccccceeeccCccccccchhhhhccccccEEecccccccCCCCCccccc
Q 001873 528 PD---TLPTSLQLVDLSDNRLSGSLAHSIGSLTELSKLLLSKNQLSGRIPAEILSCRKLILLDIGNNRFSGEIPKELGQI 604 (1001)
Q Consensus 528 p~---~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 604 (1001)
|. .....++.|++.+|.++...-..+.++.+|+.|+|++|+|.......+.++..|++|+||+|+|+ .+|..+.++
T Consensus 351 p~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~ 429 (1081)
T KOG0618|consen 351 PSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANL 429 (1081)
T ss_pred ccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhh
Confidence 32 22356788999999999877778999999999999999998555556788999999999999998 889999999
Q ss_pred cchhhhhhcCCCcccccccccccccccccEEEecCCcCCCCh-hhhhcccccceeEcccCC
Q 001873 605 SSLEISLNLSSNQFSGEIPSEFSGLTKLGILDLSHNKLSGDL-DALASLQNLVSLNVSFND 664 (1001)
Q Consensus 605 ~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~l~~L~~L~ls~N~ 664 (1001)
+.|++ |...+|++. ..| ++..+++|+.+|+|.|.++... +.-..-++|++||++||.
T Consensus 430 ~~L~t-L~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 430 GRLHT-LRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNT 487 (1081)
T ss_pred hhhHH-HhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCc
Confidence 99997 999999998 566 8999999999999999998732 322233899999999997
No 29
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-37 Score=316.89 Aligned_cols=222 Identities=26% Similarity=0.383 Sum_probs=191.5
Q ss_pred HHhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecC----CCchhhHHHHHHHhhccCCCceeeEEeeeec-----CC
Q 001873 764 VVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWS----SDESGAFSSEIQTLGSIRHKNIVRLLGWGSN-----KN 833 (1001)
Q Consensus 764 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~----~~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~-----~~ 833 (1001)
+.+.|...+.||+|+||.|+.+..+ +|+.||||++.. ....++..||++++++++|+||+.+.+.+.. -.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 3456666789999999999999865 799999999853 2334788899999999999999999998754 44
Q ss_pred ceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccc
Q 001873 834 LKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLAR 913 (1001)
Q Consensus 834 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~ 913 (1001)
..|+|+|+|+ .+|.+.++.. ..++...+.-+++|+++|++|+|+. +|+|||+||+|++++.+..+||||||+|+
T Consensus 100 DvYiV~elMe-tDL~~iik~~--~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLAR 173 (359)
T KOG0660|consen 100 DVYLVFELME-TDLHQIIKSQ--QDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLAR 173 (359)
T ss_pred eeEEehhHHh-hHHHHHHHcC--ccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEecccccee
Confidence 6799999994 7999999864 3388888999999999999999998 99999999999999999999999999999
Q ss_pred cccCCCCCCCCCCCCCCcccccccccCcccc-ccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcCcccchhhhhcc
Q 001873 914 IVSGSGDDNCSKTNQRPQLAGSYGYMAPEHA-SMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLM 992 (1001)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~~~~~l~~~~~~~~~~ 992 (1001)
..... ......+..+.|.+|.|||++ ....|+.+.||||.|||+.||++|+ +.++|.+.+.|...++...
T Consensus 174 ~~~~~-----~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gk----plFpG~d~v~Ql~lI~~~l 244 (359)
T KOG0660|consen 174 YLDKF-----FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGK----PLFPGKDYVHQLQLILELL 244 (359)
T ss_pred ecccc-----CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCC----CCCCCCchHHHHHHHHHhc
Confidence 87543 344566778999999999986 4588999999999999999999999 5777889999999999999
Q ss_pred cchhhhcc
Q 001873 993 LNLEAEQT 1000 (1001)
Q Consensus 993 ~~~~~~~~ 1000 (1001)
|.+++|..
T Consensus 245 GtP~~e~l 252 (359)
T KOG0660|consen 245 GTPSEEDL 252 (359)
T ss_pred CCCCHHHH
Confidence 87776653
No 30
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-36 Score=316.99 Aligned_cols=209 Identities=29% Similarity=0.414 Sum_probs=185.3
Q ss_pred HhcccCCCeEeecCCeeEEEEEe-CCCCEEEEEEecCCC---chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEE
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTI-PNGETLAVKKMWSSD---ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYD 840 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e 840 (1001)
.+.|+...+||.|..++||+|+. +.++.||||++.-+. +.+.+.+|++.|+.++||||++++..|..+...|+||.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 46799999999999999999984 578999999995443 23778999999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCC
Q 001873 841 YLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGD 920 (1001)
Q Consensus 841 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~ 920 (1001)
||.+||+.++++......+++..+..|.+++++||.|||.+ |.||||||+.|||++.+|.|||+|||.+..+...+.
T Consensus 105 fMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~ 181 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGD 181 (516)
T ss_pred hhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeecccCc
Confidence 99999999999988888899999999999999999999999 999999999999999999999999998877766552
Q ss_pred CCCCCCCCCCcccccccccCcccc--ccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCC
Q 001873 921 DNCSKTNQRPQLAGSYGYMAPEHA--SMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGG 979 (1001)
Q Consensus 921 ~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~~~ 979 (1001)
.. .... ...+||+.|||||++ ....|+.|+||||||++..|+.+|..||....|-+
T Consensus 182 R~--~~rf-~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmk 239 (516)
T KOG0582|consen 182 RQ--VTRF-NTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMK 239 (516)
T ss_pred ee--eEee-ccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHH
Confidence 21 2222 667999999999994 34789999999999999999999999998876443
No 31
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.1e-37 Score=316.93 Aligned_cols=217 Identities=27% Similarity=0.392 Sum_probs=180.6
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCchhhHHHHHHHhhccCCCceeeEEeeeecCC-----ceEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKN-----LKLLFY 839 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~-----~~~lv~ 839 (1001)
-.|+..+++|+|+||.||+|... +++.||||+++.+...+ .+|+++|++++|||||++..+|.... +..+||
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k--nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVl 101 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK--NRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVL 101 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC--cHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHH
Confidence 35777889999999999999965 57999999997765533 37999999999999999998775322 345899
Q ss_pred EccCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCC-CcEEEeccccccccc
Q 001873 840 DYLPNGSLSSLLHGA--GKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPG-YQAYLADFGLARIVS 916 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~ki~Dfgla~~~~ 916 (1001)
|||| .+|+++++.. .+..++...++-++.||.+|+.|||+. +|+||||||+|+|+|.+ |.+||||||.|+.+.
T Consensus 102 eymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~ 177 (364)
T KOG0658|consen 102 EYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAKVLV 177 (364)
T ss_pred Hhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcceeec
Confidence 9998 6999998852 244577778888999999999999997 99999999999999965 999999999999875
Q ss_pred CCCCCCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcCcccchhhhhcccch
Q 001873 917 GSGDDNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLMLNL 995 (1001)
Q Consensus 917 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~~~~~l~~~~~~~~~~~~~ 995 (1001)
.. .......-|+.|+|||.+.+ ..|+.+.||||.|||+.||+-|++ .++|+...+|.+++.-..|.+
T Consensus 178 ~~--------epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~p----lFpG~s~~dQL~eIik~lG~P 245 (364)
T KOG0658|consen 178 KG--------EPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQP----LFPGDSSVDQLVEIIKVLGTP 245 (364)
T ss_pred cC--------CCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCc----ccCCCCHHHHHHHHHHHhCCC
Confidence 33 23344567899999998754 789999999999999999999995 566778888889988888877
Q ss_pred hhhcc
Q 001873 996 EAEQT 1000 (1001)
Q Consensus 996 ~~~~~ 1000 (1001)
.+|++
T Consensus 246 t~e~I 250 (364)
T KOG0658|consen 246 TREDI 250 (364)
T ss_pred CHHHH
Confidence 77654
No 32
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-36 Score=331.55 Aligned_cols=200 Identities=30% Similarity=0.422 Sum_probs=177.2
Q ss_pred HHhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC-------CchhhHHHHHHHhhccC-CCceeeEEeeeecCCc
Q 001873 764 VVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS-------DESGAFSSEIQTLGSIR-HKNIVRLLGWGSNKNL 834 (1001)
Q Consensus 764 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-------~~~~~~~~Ei~~l~~l~-h~nIv~l~~~~~~~~~ 834 (1001)
..+.|.+.+.||+|+||+|+.|++. +++.||+|.+... ...+.+.+|+.++++++ ||||+++++++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 4578999999999999999999754 6899999966443 12356778999999998 9999999999999999
Q ss_pred eEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCC-CcEEEecccccc
Q 001873 835 KLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPG-YQAYLADFGLAR 913 (1001)
Q Consensus 835 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~ki~Dfgla~ 913 (1001)
+++||||+.||+|.+++.+ ...+.+..+.+++.|++.|++|+|+. +|+||||||+||+++.+ +++||+|||++.
T Consensus 95 ~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~s~ 169 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGLSA 169 (370)
T ss_pred EEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEecccccc
Confidence 9999999999999999987 34588899999999999999999998 99999999999999999 999999999998
Q ss_pred cccCCCCCCCCCCCCCCcccccccccCccccccCC-CC-CccchHHHHHHHHHHHhCCCCCCCC
Q 001873 914 IVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQR-IT-EKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
... .........+||+.|+|||++.+.. |+ .++||||+||++|.|++|+.||+..
T Consensus 170 ~~~-------~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~ 226 (370)
T KOG0583|consen 170 ISP-------GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDS 226 (370)
T ss_pred ccC-------CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCc
Confidence 763 1223455679999999999999877 85 8999999999999999999999974
No 33
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=9.1e-36 Score=310.48 Aligned_cols=217 Identities=27% Similarity=0.349 Sum_probs=182.8
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc----hhhHHHHHHHhhccCCCc-eeeEEeeeecCC-----
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE----SGAFSSEIQTLGSIRHKN-IVRLLGWGSNKN----- 833 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~Ei~~l~~l~h~n-Iv~l~~~~~~~~----- 833 (1001)
...|+.+++||+|+||+||+|+.+ +|+.||+|++..+.+ .....+|+.++++++|+| ||.+++++....
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 345677778999999999999965 789999999965543 245789999999999999 999999988776
Q ss_pred -ceEEEEEccCCCCHHHHhhcCCC--CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEeccc
Q 001873 834 -LKLLFYDYLPNGSLSSLLHGAGK--GGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFG 910 (1001)
Q Consensus 834 -~~~lv~e~~~~gsL~~~l~~~~~--~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfg 910 (1001)
..++|+||++ -+|.+++..... ...+...++.++.||++|++|||++ +|+||||||+||+++++|.+||+|||
T Consensus 90 ~~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFG 165 (323)
T KOG0594|consen 90 GKLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFG 165 (323)
T ss_pred ceEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccc
Confidence 7889999997 699999988654 3577788999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcCcccchhhh
Q 001873 911 LARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLM 989 (1001)
Q Consensus 911 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~~~~~l~~~~~~~ 989 (1001)
+|+...- .....+..++|.+|+|||++.+ ..|+...||||+|||+.||++++.-|. ++.+.+|...++
T Consensus 166 lAra~~i-------p~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFp----G~se~~ql~~If 234 (323)
T KOG0594|consen 166 LARAFSI-------PMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFP----GDSEIDQLFRIF 234 (323)
T ss_pred hHHHhcC-------CcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCC----CCcHHHHHHHHH
Confidence 9996542 2233455689999999999866 489999999999999999999986554 555677877777
Q ss_pred hcccchh
Q 001873 990 FLMLNLE 996 (1001)
Q Consensus 990 ~~~~~~~ 996 (1001)
..+|-+.
T Consensus 235 ~~lGtP~ 241 (323)
T KOG0594|consen 235 RLLGTPN 241 (323)
T ss_pred HHcCCCC
Confidence 6666443
No 34
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-36 Score=328.37 Aligned_cols=200 Identities=25% Similarity=0.390 Sum_probs=179.1
Q ss_pred HHHHhcccCCCeEeecCCeeEEEEEe-CCCCEEEEEEecCCC--chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEE
Q 001873 762 DDVVRNLTSANVIGTGSSGVVYRVTI-PNGETLAVKKMWSSD--ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLF 838 (1001)
Q Consensus 762 ~~~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv 838 (1001)
.+-...|+..++||+|+.|.||.++. .+++.||||++.... ..+-+.+|+.+|+..+|+|||.+++.+..++..|+|
T Consensus 269 ~dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVV 348 (550)
T KOG0578|consen 269 GDPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVV 348 (550)
T ss_pred CChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEE
Confidence 44457788889999999999999874 478999999985443 335688999999999999999999988888999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCC
Q 001873 839 YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGS 918 (1001)
Q Consensus 839 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~ 918 (1001)
||||+||+|.|.+... .+++.++..|.+++++||+|||.+ +|+|||||.+|||++.+|.+||+|||++..+...
T Consensus 349 MEym~ggsLTDvVt~~---~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~ 422 (550)
T KOG0578|consen 349 MEYMEGGSLTDVVTKT---RMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEE 422 (550)
T ss_pred EeecCCCchhhhhhcc---cccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeeccccc
Confidence 9999999999999853 489999999999999999999999 9999999999999999999999999999887543
Q ss_pred CCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCC
Q 001873 919 GDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974 (1001)
Q Consensus 919 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~ 974 (1001)
...+.+.+|||.|||||+.....|++|+||||||++++||+-|++||--
T Consensus 423 -------~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYln 471 (550)
T KOG0578|consen 423 -------QSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLN 471 (550)
T ss_pred -------cCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccC
Confidence 2256677999999999999999999999999999999999999999863
No 35
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-36 Score=329.71 Aligned_cols=196 Identities=33% Similarity=0.495 Sum_probs=169.6
Q ss_pred hcccCCCeEeecCCeeEEEEEeCCCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
++..+...||+|.||+||+|+|. -.||||++.... ..++|++|+.++++-+|.||+-|.|||..++. .||+.|
T Consensus 392 ~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqw 468 (678)
T KOG0193|consen 392 EEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQW 468 (678)
T ss_pred HHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehh
Confidence 34566778999999999999984 479999885432 34789999999999999999999999998887 999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
|+|-+|+.+++.. +..++..+...||.|||+||.|||.+ +|||||||..||++.++++|||+|||++..-.-
T Consensus 469 CeGsSLY~hlHv~-etkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~---- 540 (678)
T KOG0193|consen 469 CEGSSLYTHLHVQ-ETKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTR---- 540 (678)
T ss_pred ccCchhhhhccch-hhhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccceeeeee----
Confidence 9999999999976 45689999999999999999999999 999999999999999999999999999975321
Q ss_pred CCCCCCCCCcccccccccCcccccc---CCCCCccchHHHHHHHHHHHhCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASM---QRITEKSDVYSFGVVLLEVLTGRHPLD 973 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~SlG~il~elltg~~Pf~ 973 (1001)
...........|..-|||||++.. .+|++.+||||||+|+|||+||..||.
T Consensus 541 -w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys 594 (678)
T KOG0193|consen 541 -WSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS 594 (678)
T ss_pred -eccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC
Confidence 122233334457889999999854 678999999999999999999999998
No 36
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-36 Score=317.57 Aligned_cols=202 Identities=34% Similarity=0.522 Sum_probs=172.4
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc--hhhHHHHHHHhhccCCCceeeEEeeeecCC--ceEEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE--SGAFSSEIQTLGSIRHKNIVRLLGWGSNKN--LKLLFYD 840 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~--~~~lv~e 840 (1001)
.+|...+.||+|+||.||++... +|+.+|||.+..... .+.+.+|+.++++++|||||+++|...... .++++||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 35777889999999999999975 489999998854421 456899999999999999999999744444 6899999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECC-CCcEEEecccccccccCCC
Q 001873 841 YLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGP-GYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 841 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~-~~~~ki~Dfgla~~~~~~~ 919 (1001)
|+++|+|.+++.+.+. .+++..+..+++||++|++|||++ +||||||||+|||++. ++.+||+|||+++.....
T Consensus 97 y~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~- 171 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLESK- 171 (313)
T ss_pred ccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCccccccccc-
Confidence 9999999999998765 799999999999999999999998 9999999999999999 799999999999876531
Q ss_pred CCCCCCCCCCCcccccccccCccccccC-CCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHASMQ-RITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
...........||+.|||||++..+ ....++||||+||++.||+||+.||...
T Consensus 172 ---~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~ 225 (313)
T KOG0198|consen 172 ---GTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF 225 (313)
T ss_pred ---cccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh
Confidence 1122334456899999999999853 3345999999999999999999999873
No 37
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-36 Score=321.32 Aligned_cols=185 Identities=29% Similarity=0.480 Sum_probs=166.1
Q ss_pred CCeEeecCCeeEEEEEeCCCCEEEEEEecCCCchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCCCCHHHH
Q 001873 771 ANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSL 850 (1001)
Q Consensus 771 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~ 850 (1001)
.+-+|.|+-|.||.|+.+ ++.||||+++.- -+.+|+-+++++||||+.|.|+|.....+|||||||..|-|+..
T Consensus 129 LeWlGSGaQGAVF~Grl~-netVAVKKV~el-----kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~V 202 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLH-NETVAVKKVREL-----KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEV 202 (904)
T ss_pred hhhhccCcccceeeeecc-CceehhHHHhhh-----hhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHH
Confidence 456999999999999994 799999998432 23578899999999999999999999999999999999999999
Q ss_pred hhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCCCCCCCC
Q 001873 851 LHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRP 930 (1001)
Q Consensus 851 l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~ 930 (1001)
++.. ..+.......+..+||.||.|||.+ .|||||||.-||||..+..|||+|||-++.... .....
T Consensus 203 Lka~--~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~--------~STkM 269 (904)
T KOG4721|consen 203 LKAG--RPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSD--------KSTKM 269 (904)
T ss_pred Hhcc--CccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhh--------hhhhh
Confidence 9874 4578888889999999999999998 999999999999999999999999999987532 22344
Q ss_pred cccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCC
Q 001873 931 QLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974 (1001)
Q Consensus 931 ~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~ 974 (1001)
.++||..|||||++...+.++|+||||||||+|||+||..||..
T Consensus 270 SFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkd 313 (904)
T KOG4721|consen 270 SFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKD 313 (904)
T ss_pred hhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccc
Confidence 57899999999999999999999999999999999999999874
No 38
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=8.2e-38 Score=338.23 Aligned_cols=368 Identities=26% Similarity=0.370 Sum_probs=234.1
Q ss_pred EeeecCccc-CCCCcccCCCCCCcEEEcCCCcccccCCCCccCCCCCCEEeccCCCCCCCCCcccccccCccEEEccccc
Q 001873 276 LYLYQNSIS-GPIPGRIGALSKLKSLLLWQNSLVGAIPDELGSCTELTVVDFSDNLLTGSIPRSFGNLLKLQELQLSVNQ 354 (1001)
Q Consensus 276 L~L~~N~i~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 354 (1001)
.|+++|.++ +..|.....|++++.|.|...++. .+|+.++.+.+|+.|.+++|++. .+-..+..++.|+.+++..|+
T Consensus 12 vDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R~N~ 89 (1255)
T KOG0444|consen 12 VDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVRDNN 89 (1255)
T ss_pred ccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhhccc
Confidence 344444444 233444444444444444444443 34444444444444444444444 233334444444444444444
Q ss_pred ccC-cCChhhccccccCEEeccCCcccCccCccccccCcccEEEeecCccCCCCCcccccCcccceEeCcCccccCCCCc
Q 001873 355 LSG-TIPIEIATCTALTHLEIDNNAISGEIPADIGNINGLTLFFAWKNKLTGNIPESLSQCQELQALDFSYNNLSGPIPK 433 (1001)
Q Consensus 355 l~~-~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~ 433 (1001)
+.. -+|..+..+..|+.|||++|++. +.|..+...+++..|++++|+|..+....|.+++.|-.||||+|++. .+|.
T Consensus 90 LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPP 167 (1255)
T KOG0444|consen 90 LKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPP 167 (1255)
T ss_pred cccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh-hcCH
Confidence 431 13444444444444444444444 33444444444444444444444222233455556666666666665 4455
Q ss_pred ccccccccceEEccCCcCCCCCCCCCCCCCCcceEEccccccc-cCCCcccCCCCCcceeeccCcccccCCccccccccc
Q 001873 434 EIFGLRNLTKLLLLSNDLSGFIPPDIGNCTTLRRLRLNDNRLS-GTIPSEMGNLKHLNFVDMSENHLVGGIPPSVVGCQS 512 (1001)
Q Consensus 434 ~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 512 (1001)
.+..+.+|++|.|++|.+...--..+..+++|+.|.+++.+=+ ..+|.++..+.+|..+|+|+|.+. .+|+.+.++++
T Consensus 168 Q~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~ 246 (1255)
T KOG0444|consen 168 QIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRN 246 (1255)
T ss_pred HHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhh
Confidence 5566666666666666655433334445666777777765533 356777777777777777777777 67777777777
Q ss_pred CceEEcccccCcccCCCCcccccccccCCCCcCCCCcccccccccccceeeccCccccccchhhhhccccccEEeccccc
Q 001873 513 LEFLDLHSNGLTGSVPDTLPTSLQLVDLSDNRLSGSLAHSIGSLTELSKLLLSKNQLSGRIPAEILSCRKLILLDIGNNR 592 (1001)
Q Consensus 513 L~~L~Ls~N~l~~~~p~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 592 (1001)
|+.|+||+|+|+. ..-..+.-.+|++|+||+|+++ .+|++++.+++|+.|++.+|+
T Consensus 247 LrrLNLS~N~ite-----------------------L~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~Nk 302 (1255)
T KOG0444|consen 247 LRRLNLSGNKITE-----------------------LNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNK 302 (1255)
T ss_pred hheeccCcCceee-----------------------eeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCc
Confidence 7777777777762 1112344568888999999998 888999999999999999999
Q ss_pred ccC-CCCCccccccchhhhhhcCCCcccccccccccccccccEEEecCCcCCCChhhhhcccccceeEcccCCCCCCCCC
Q 001873 593 FSG-EIPKELGQISSLEISLNLSSNQFSGEIPSEFSGLTKLGILDLSHNKLSGDLDALASLQNLVSLNVSFNDFSGELPN 671 (1001)
Q Consensus 593 l~~-~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~ls~N~l~~~~p~ 671 (1001)
|+. -+|..++.+..|++ +..++|.+. .+|+.++.+.+|+.|.|++|++...|+++..|+.|++|||..|+---.+|.
T Consensus 303 L~FeGiPSGIGKL~~Lev-f~aanN~LE-lVPEglcRC~kL~kL~L~~NrLiTLPeaIHlL~~l~vLDlreNpnLVMPPK 380 (1255)
T KOG0444|consen 303 LTFEGIPSGIGKLIQLEV-FHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLITLPEAIHLLPDLKVLDLRENPNLVMPPK 380 (1255)
T ss_pred ccccCCccchhhhhhhHH-HHhhccccc-cCchhhhhhHHHHHhcccccceeechhhhhhcCCcceeeccCCcCccCCCC
Confidence 873 48999999999997 999999998 899999999999999999999999999999999999999999988777776
Q ss_pred Ccc
Q 001873 672 TPF 674 (1001)
Q Consensus 672 ~~~ 674 (1001)
+..
T Consensus 381 P~d 383 (1255)
T KOG0444|consen 381 PND 383 (1255)
T ss_pred cch
Confidence 643
No 39
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.6e-36 Score=309.00 Aligned_cols=199 Identities=23% Similarity=0.380 Sum_probs=179.6
Q ss_pred HHhcccCCCeEeecCCeeEEEEEe-CCCCEEEEEEecCCC-----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEE
Q 001873 764 VVRNLTSANVIGTGSSGVVYRVTI-PNGETLAVKKMWSSD-----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLL 837 (1001)
Q Consensus 764 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~l 837 (1001)
..-+|++.+.||+|.||+|-++.. ..|+.||||.+++.. +.-.+.+||++|+.++||||+.++++|...+...|
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvi 130 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVI 130 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEE
Confidence 445788888999999999999984 689999999875433 22357899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccC
Q 001873 838 FYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSG 917 (1001)
Q Consensus 838 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~ 917 (1001)
||||..+|.|+||+.+.+ .+++.++..+++||..|+.|+|.+ +++|||||.+|||+|+++++||+|||++..+.
T Consensus 131 vMEYaS~GeLYDYiSer~--~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~- 204 (668)
T KOG0611|consen 131 VMEYASGGELYDYISERG--SLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYA- 204 (668)
T ss_pred EEEecCCccHHHHHHHhc--cccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhc-
Confidence 999999999999999854 489999999999999999999999 99999999999999999999999999998763
Q ss_pred CCCCCCCCCCCCCcccccccccCccccccCCC-CCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 918 SGDDNCSKTNQRPQLAGSYGYMAPEHASMQRI-TEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 918 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
......+++|+|-|.+||++.+.+| ++.+|.||+||++|-+..|.+||++.
T Consensus 205 -------~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~ 256 (668)
T KOG0611|consen 205 -------DKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGR 256 (668)
T ss_pred -------cccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCc
Confidence 3456677899999999999999999 48899999999999999999999874
No 40
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=7.1e-36 Score=341.06 Aligned_cols=203 Identities=26% Similarity=0.427 Sum_probs=175.9
Q ss_pred hcccCCCeEeecCCeeEEEEEeC------CCCEEEEEEecCCCch---hhHHHHHHHhhccCCCceeeEEeeeecCCceE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP------NGETLAVKKMWSSDES---GAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKL 836 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~---~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~ 836 (1001)
.+....+.||+|+||+||+|+.. +..-||||.++...+. ++|+||+++++.++|||||+++|+|.+++..+
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~ 565 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLC 565 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeE
Confidence 34455678999999999999843 3567999999776543 68999999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHhhcCCC------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcE
Q 001873 837 LFYDYLPNGSLSSLLHGAGK------------GGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQA 904 (1001)
Q Consensus 837 lv~e~~~~gsL~~~l~~~~~------------~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 904 (1001)
+|+|||..|||.+|++.... ..++..+.+.||.|||.||+||-++ .+|||||..+|+||.++..|
T Consensus 566 MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l~V 642 (774)
T KOG1026|consen 566 MVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENLVV 642 (774)
T ss_pred EEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccceEE
Confidence 99999999999999975321 2267889999999999999999998 99999999999999999999
Q ss_pred EEecccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 905 YLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 905 ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
||+|||+++.+...++++.... ..=..+|||||.+..++|+.+||||||||+|||+++ |+.||.+..
T Consensus 643 KIsDfGLsRdiYssDYYk~~~~-----t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glS 710 (774)
T KOG1026|consen 643 KISDFGLSRDIYSSDYYKVRGN-----TLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLS 710 (774)
T ss_pred EecccccchhhhhhhhhcccCC-----ceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccc
Confidence 9999999998876655443211 123478999999999999999999999999999998 999999875
No 41
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=1.8e-37 Score=335.67 Aligned_cols=368 Identities=27% Similarity=0.406 Sum_probs=261.0
Q ss_pred CCccccccccccCCccC-CCCChhhhcccccceEEccCCcccCCCCccccCCccccceeccccccccccCCCccchhhhh
Q 001873 123 GDYRELTFIDLSGNSLW-GEIPTEVCRLRKLESLYLNTNLLEGEIPSDIGNLSSLAYLTLYDNQLSGKIPKSIGALSKLQ 201 (1001)
Q Consensus 123 ~~l~~L~~L~Ls~n~l~-g~~p~~~~~l~~L~~L~L~~n~l~~~ip~~l~~L~~L~~L~L~~n~l~g~~p~~~~~l~~L~ 201 (1001)
+-|+..+-.|+|+|.|+ +..|..+..|++++.|.|...++. .+|+.++.|.+|++|.+++|++. .+-.++..|+.|+
T Consensus 4 gVLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LR 81 (1255)
T KOG0444|consen 4 GVLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLR 81 (1255)
T ss_pred cccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhH
Confidence 34567788889999988 578999999999999999999988 89999999999999999999988 7788888899999
Q ss_pred hhhhccCcCCCCCCCcccccCccchhccccccccccccCCccccccccceeccccccccccCccc-ccCCCCCceEeeec
Q 001873 202 VFRAGGNQNLKGELPWEIGNCSNLVMLGLAETSISGNVPSSIGMLERIQTIAIYTSLLSGPIPEE-IGNCSELQNLYLYQ 280 (1001)
Q Consensus 202 ~L~l~~n~~l~~~lp~~l~~l~~L~~L~l~~~~l~~~~p~~i~~l~~L~~L~l~~n~l~g~ip~~-l~~l~~L~~L~L~~ 280 (1001)
.+.+..|+.-...+|..|..|..|+.|+||+|++. ++|..+..-+++-+|++++|++. .||.. +-+++.|-.|||++
T Consensus 82 sv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~ 159 (1255)
T KOG0444|consen 82 SVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSN 159 (1255)
T ss_pred HHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhcccc
Confidence 99999885555668888888888888888887776 56666666666667777777666 45543 45677777777777
Q ss_pred CcccCCCCcccCCCCCCcEEEcCCCcccccCCCCccCCCCCCEEeccCCCCC-CCCCcccccccCccEEEcccccccCcC
Q 001873 281 NSISGPIPGRIGALSKLKSLLLWQNSLVGAIPDELGSCTELTVVDFSDNLLT-GSIPRSFGNLLKLQELQLSVNQLSGTI 359 (1001)
Q Consensus 281 N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 359 (1001)
|++. .+|..+..|..|++|.|++|.+....-.-+..+++|++|.+|+.+=+ ..+|.++..+.+|..+|||.|.+. ..
T Consensus 160 NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~v 237 (1255)
T KOG0444|consen 160 NRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IV 237 (1255)
T ss_pred chhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cc
Confidence 7776 56666777777777777777665433344555667777777766533 346667777777777777777776 66
Q ss_pred ChhhccccccCEEeccCCcccCccCccccccCcccEEEeecCccCCCCCcccccCcccceEeCcCcccc-CCCCcccccc
Q 001873 360 PIEIATCTALTHLEIDNNAISGEIPADIGNINGLTLFFAWKNKLTGNIPESLSQCQELQALDFSYNNLS-GPIPKEIFGL 438 (1001)
Q Consensus 360 p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l 438 (1001)
|..+.++++|+.|+|++|+|+ .+....+...+|+.|+++.|+++ .+|+++++++.|+.|.+.+|+++ .-+|..++++
T Consensus 238 Pecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL 315 (1255)
T KOG0444|consen 238 PECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKL 315 (1255)
T ss_pred hHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhh
Confidence 777777777777777777776 34444445556666666666666 55666666666666666666655 2356666666
Q ss_pred cccceEEccCCcCCCCCCCCCCCCCCcceEEccccccccCCCcccCCCCCcceeeccCcccc
Q 001873 439 RNLTKLLLLSNDLSGFIPPDIGNCTTLRRLRLNDNRLSGTIPSEMGNLKHLNFVDMSENHLV 500 (1001)
Q Consensus 439 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 500 (1001)
.+|+.+..++|.+. .+|..++.|..|+.|.|+.|++. ++|+.+.-++.|+.||+.+|.--
T Consensus 316 ~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnL 375 (1255)
T KOG0444|consen 316 IQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNL 375 (1255)
T ss_pred hhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCc
Confidence 66666666666665 56666666666666666666665 56666666666666666666543
No 42
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-36 Score=333.27 Aligned_cols=220 Identities=25% Similarity=0.399 Sum_probs=183.1
Q ss_pred cccCCCeEeecCCeeEEEEEeC----CCCEEEEEEecCC---CchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP----NGETLAVKKMWSS---DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~---~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
..++.++||.|.||+||+|+++ ....||||.++.. ....+|..|+.||.+++||||+++.|+.......+||.
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiT 709 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIIT 709 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEh
Confidence 3567789999999999999875 2467999999763 34578999999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
|||++|+|..|+++.. ..+.+.+...+.++||.||+||.+. ++|||||.++|||++.+-.+|++|||+++.+.++.
T Consensus 710 EyMENGsLDsFLR~~D-GqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~ 785 (996)
T KOG0196|consen 710 EYMENGSLDSFLRQND-GQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 785 (996)
T ss_pred hhhhCCcHHHHHhhcC-CceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccceeecccCC
Confidence 9999999999999874 4588999999999999999999998 99999999999999999999999999999875543
Q ss_pred CCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCcCcccchhhhhcccchh
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTLPGGAPLVQWTPLMFLMLNLE 996 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~~~~~~l~~~~~~~~~~~~~~ 996 (1001)
.... .+ ... .-..+|.|||.+..++++.++||||||++|||.++ |+.||..+. ++++..-++....+-|+|
T Consensus 786 ~~~y-tt-~GG--KIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmS--NQdVIkaIe~gyRLPpPm 857 (996)
T KOG0196|consen 786 EAAY-TT-LGG--KIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS--NQDVIKAIEQGYRLPPPM 857 (996)
T ss_pred Cccc-cc-cCC--ccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccc--hHHHHHHHHhccCCCCCC
Confidence 2111 11 111 12368999999999999999999999999999887 999998774 344455555544444444
No 43
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.4e-35 Score=322.13 Aligned_cols=198 Identities=29% Similarity=0.401 Sum_probs=178.1
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEE
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLF 838 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv 838 (1001)
...|+..+.||.|+.|.|-.|++. +|+.+|||++.... ....+.+||-+|+-+.||||+++++++.+..++|+|
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv 90 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV 90 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence 456888899999999999999965 79999999985542 235788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCC
Q 001873 839 YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGS 918 (1001)
Q Consensus 839 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~ 918 (1001)
.||++||.|.+++-+.+ .+++.++.+++.||+.|+.|+|+. +|+|||+||+|+|+|..+++||+|||+|..-.
T Consensus 91 lEyv~gGELFdylv~kG--~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~-- 163 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVRKG--PLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEV-- 163 (786)
T ss_pred EEecCCchhHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeeccc--
Confidence 99999999999998754 489999999999999999999998 99999999999999999999999999998643
Q ss_pred CCCCCCCCCCCCcccccccccCccccccCCCC-CccchHHHHHHHHHHHhCCCCCCCC
Q 001873 919 GDDNCSKTNQRPQLAGSYGYMAPEHASMQRIT-EKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 919 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
......+.||+|.|.|||++.+.+|. .++||||.|||+|.++||+.||+++
T Consensus 164 ------~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd 215 (786)
T KOG0588|consen 164 ------PGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD 215 (786)
T ss_pred ------CCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc
Confidence 23445567999999999999999995 8999999999999999999999943
No 44
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-35 Score=288.82 Aligned_cols=199 Identities=28% Similarity=0.430 Sum_probs=182.5
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
++|++.+.||+|-||.||.|+.+ ++-.||+|++.+.+ ...++.+|+++-+.++||||+++++||.++...|+++
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil 101 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL 101 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence 56889999999999999999965 67889999885533 3468999999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
||.+.|++...+++.....+++.....++.|+|.|+.|+|.. +|+||||||+|+|++.++..||+|||.+...
T Consensus 102 Eya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~---- 174 (281)
T KOG0580|consen 102 EYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHA---- 174 (281)
T ss_pred EecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeec----
Confidence 999999999999977777889999999999999999999998 9999999999999999999999999998753
Q ss_pred CCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
....+.+.+||..|.|||...+..++..+|+|++|+..||++.|.+||+...
T Consensus 175 -----p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~ 226 (281)
T KOG0580|consen 175 -----PSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS 226 (281)
T ss_pred -----CCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh
Confidence 2455677899999999999999999999999999999999999999999765
No 45
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-35 Score=324.72 Aligned_cols=201 Identities=25% Similarity=0.365 Sum_probs=177.4
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC-----CchhhHHHHHHHhhcc-CCCceeeEEeeeecCCceEE
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS-----DESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLL 837 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~~~~~l 837 (1001)
.++|+..++||+|+||+|+++..+ +++.+|||.+++. ++.+....|.+++... +||.++.++..|..+++.|+
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f 446 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF 446 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence 357889999999999999999976 6889999988654 3446778888888777 59999999999999999999
Q ss_pred EEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccC
Q 001873 838 FYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSG 917 (1001)
Q Consensus 838 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~ 917 (1001)
||||+.||++..+.+ ...+++..+.-++..++.||.|||++ +|||||||.+|||+|.+|++||+|||+++.-..
T Consensus 447 vmey~~Ggdm~~~~~---~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~ 520 (694)
T KOG0694|consen 447 VMEYVAGGDLMHHIH---TDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMG 520 (694)
T ss_pred EEEecCCCcEEEEEe---cccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccccCC
Confidence 999999999555544 35589999999999999999999999 999999999999999999999999999986432
Q ss_pred CCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCC
Q 001873 918 SGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978 (1001)
Q Consensus 918 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~~ 978 (1001)
......+.+|||.|||||++.+..|+.++|-|||||+||||+.|..||.+..++
T Consensus 521 -------~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe 574 (694)
T KOG0694|consen 521 -------QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE 574 (694)
T ss_pred -------CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH
Confidence 234556789999999999999999999999999999999999999999977544
No 46
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-35 Score=308.32 Aligned_cols=206 Identities=23% Similarity=0.334 Sum_probs=170.1
Q ss_pred HHHhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----------------chhhHHHHHHHhhccCCCceeeE
Q 001873 763 DVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----------------ESGAFSSEIQTLGSIRHKNIVRL 825 (1001)
Q Consensus 763 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----------------~~~~~~~Ei~~l~~l~h~nIv~l 825 (1001)
....+|++.+.||+|.||+|-+|+.. +++.||||++.+.. ..+...+||.+|++++|||||++
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 34678999999999999999999865 78999999884321 11468899999999999999999
Q ss_pred Eeeeec--CCceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCc
Q 001873 826 LGWGSN--KNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQ 903 (1001)
Q Consensus 826 ~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~ 903 (1001)
+++..+ .+..|||+|||..|.+...-.+ ...+++.++++++++++.||+|||.+ +||||||||+|+|++++|+
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~p~d--~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g~ 248 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWCPPD--KPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDGT 248 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccCCCC--cccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCCc
Confidence 999875 4578999999999887655432 22289999999999999999999999 9999999999999999999
Q ss_pred EEEecccccccccCCCCCCCCCCCCCCcccccccccCccccccC---C-CCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 904 AYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ---R-ITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 904 ~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~-~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
+||+|||.+.......+.. ........+|||.|+|||...++ . .+.+.||||+||++|.++.|+.||.+.
T Consensus 249 VKIsDFGVs~~~~~~~~~~--~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~ 322 (576)
T KOG0585|consen 249 VKISDFGVSNEFPQGSDEG--SDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDD 322 (576)
T ss_pred EEeeccceeeecccCCccc--cHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccc
Confidence 9999999988764432211 11223336899999999988652 2 357899999999999999999999765
No 47
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.9e-34 Score=326.14 Aligned_cols=206 Identities=24% Similarity=0.324 Sum_probs=175.4
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
++|++.+.||+|+||+||+++.. +++.||||++.... ....+.+|+.++++++||||+++++.+.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 36888999999999999999865 68999999985422 2256788999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
||+++|+|.+++.+. ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++++||+|||+++.+....
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~ 155 (363)
T cd05628 81 EFLPGGDMMTLLMKK--DTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAH 155 (363)
T ss_pred cCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCcccccccc
Confidence 999999999999864 4589999999999999999999998 99999999999999999999999999998653221
Q ss_pred CCCC----------------------------CCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCC
Q 001873 920 DDNC----------------------------SKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHP 971 (1001)
Q Consensus 920 ~~~~----------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~P 971 (1001)
.... .........+||+.|+|||++.+..++.++||||+||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~P 235 (363)
T cd05628 156 RTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (363)
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCC
Confidence 1000 000111345799999999999999999999999999999999999999
Q ss_pred CCCCC
Q 001873 972 LDPTL 976 (1001)
Q Consensus 972 f~~~~ 976 (1001)
|.+..
T Consensus 236 f~~~~ 240 (363)
T cd05628 236 FCSET 240 (363)
T ss_pred CCCCC
Confidence 98654
No 48
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.2e-33 Score=310.21 Aligned_cols=198 Identities=23% Similarity=0.312 Sum_probs=173.3
Q ss_pred ccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 768 LTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 768 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
|+..+.||+|+||+||++... +++.||||++.... ....+.+|+.++++++|++|+++++++.+.+..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 677889999999999999864 78999999875432 224577899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
+++|+|.+++.......+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||++.......
T Consensus 82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 156 (285)
T cd05631 82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE-- 156 (285)
T ss_pred cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC--
Confidence 9999999988765555689999999999999999999998 99999999999999999999999999998653211
Q ss_pred CCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
......||+.|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus 157 ------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~ 205 (285)
T cd05631 157 ------TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRK 205 (285)
T ss_pred ------eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCC
Confidence 1123468999999999999999999999999999999999999998653
No 49
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-34 Score=309.42 Aligned_cols=204 Identities=26% Similarity=0.374 Sum_probs=176.3
Q ss_pred hcccCCCeEeecCCeeEEEEEeCCCCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEcc
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYL 842 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 842 (1001)
+...+.++||+|-||+|.+.+...+..||||+++.... ..+|.+|+++|.+++|||||+++|+|..++.+++|+|||
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYm 617 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYM 617 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHH
Confidence 34566789999999999999987789999999976543 378999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCC
Q 001873 843 PNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922 (1001)
Q Consensus 843 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~ 922 (1001)
++|+|.+|+.++......-....+|+.||+.||+||.+- .+||||+.++|+|++.++++||+|||+++-+..++.+.
T Consensus 618 EnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~ 694 (807)
T KOG1094|consen 618 ENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYR 694 (807)
T ss_pred hcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccccCCcee
Confidence 999999999887544445556678999999999999997 99999999999999999999999999999765544332
Q ss_pred CCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh--CCCCCCCCCC
Q 001873 923 CSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT--GRHPLDPTLP 977 (1001)
Q Consensus 923 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt--g~~Pf~~~~~ 977 (1001)
. ....+-..+|||||.+..++++.++|||+||+++||+++ +..||.....
T Consensus 695 v-----qgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~ 746 (807)
T KOG1094|consen 695 V-----QGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTD 746 (807)
T ss_pred e-----ecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhH
Confidence 2 222345679999999999999999999999999999865 8889987653
No 50
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1e-34 Score=316.08 Aligned_cols=201 Identities=25% Similarity=0.347 Sum_probs=181.0
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecCCc-eEEE
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNL-KLLF 838 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~-~~lv 838 (1001)
.++|..++.+|+|+||.++.++++ +++.||+|++.-.. +++...+|+.++++++|||||.+.+.|.+++. .+||
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 357888999999999999998876 67899999985433 33567889999999999999999999988887 8999
Q ss_pred EEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCC
Q 001873 839 YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGS 918 (1001)
Q Consensus 839 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~ 918 (1001)
|+|++||++.+.+.+.+...++++.+.+++.|++.|+.|||++ +|+|||||+.||+++.++.|||+|||+|+.+.+.
T Consensus 83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE 159 (426)
T ss_pred EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence 9999999999999988767789999999999999999999988 9999999999999999999999999999987543
Q ss_pred CCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 919 GDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 919 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
. ....+.+||+.||.||.+.+.+|+.|+||||+||++|||++=+.+|...
T Consensus 160 ~-------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~ 209 (426)
T KOG0589|consen 160 D-------SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKAS 209 (426)
T ss_pred h-------hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCcc
Confidence 2 2445679999999999999999999999999999999999999999764
No 51
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=2.9e-34 Score=319.59 Aligned_cols=217 Identities=26% Similarity=0.307 Sum_probs=191.1
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCch-hhHHHHHHHhhccC-C-----CceeeEEeeeecCCceE
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDES-GAFSSEIQTLGSIR-H-----KNIVRLLGWGSNKNLKL 836 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~Ei~~l~~l~-h-----~nIv~l~~~~~~~~~~~ 836 (1001)
..+|.+.++||+|+||.|.++.+. +++.||||+++..... .+-..|+.++..++ | -|+|+++++|...++.|
T Consensus 185 ~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlc 264 (586)
T KOG0667|consen 185 AYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLC 264 (586)
T ss_pred EEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccccee
Confidence 348999999999999999999854 6999999999776543 66778999999996 4 38999999999999999
Q ss_pred EEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCC--CcEEEeccccccc
Q 001873 837 LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPG--YQAYLADFGLARI 914 (1001)
Q Consensus 837 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~--~~~ki~Dfgla~~ 914 (1001)
||+|.++ .+|+++++.....+++...++.|+.||+.||.+||+. +|||+||||+|||+.+- ..+||+|||.|..
T Consensus 265 iVfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~ 340 (586)
T KOG0667|consen 265 IVFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGSSCF 340 (586)
T ss_pred eeehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEecccccc
Confidence 9999995 7999999998888899999999999999999999998 99999999999999743 4899999999987
Q ss_pred ccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcCcccchhhhhcccc
Q 001873 915 VSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLMLN 994 (1001)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~~~~~l~~~~~~~~~~~~ 994 (1001)
.... ....+.++.|+|||++.+.+|+.+.||||||||+.||++|. +.++|+...+|...++...|.
T Consensus 341 ~~q~----------vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~----PLfpG~ne~DQl~~I~e~lG~ 406 (586)
T KOG0667|consen 341 ESQR----------VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGE----PLFPGDNEYDQLARIIEVLGL 406 (586)
T ss_pred cCCc----------ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCc----cccCCCCHHHHHHHHHHHhCC
Confidence 5321 22457889999999999999999999999999999999996 567788899999999999997
Q ss_pred hhhhc
Q 001873 995 LEAEQ 999 (1001)
Q Consensus 995 ~~~~~ 999 (1001)
++++.
T Consensus 407 Pp~~m 411 (586)
T KOG0667|consen 407 PPPKM 411 (586)
T ss_pred CCHHH
Confidence 77653
No 52
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=7e-34 Score=323.62 Aligned_cols=206 Identities=26% Similarity=0.335 Sum_probs=175.2
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC-----CchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS-----DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
++|++.+.||+|+||+||+++.. +++.||||++... .....+.+|+.+++.++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 36888999999999999999975 6899999998542 22356788999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
||+++|+|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.+....
T Consensus 81 E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 155 (364)
T cd05599 81 EYLPGGDMMTLLMKK--DTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSH 155 (364)
T ss_pred CCCCCcHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceeccccc
Confidence 999999999999764 3489999999999999999999998 99999999999999999999999999987653321
Q ss_pred CCCCCC-------------------------------CCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhC
Q 001873 920 DDNCSK-------------------------------TNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTG 968 (1001)
Q Consensus 920 ~~~~~~-------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg 968 (1001)
...... .......+||+.|+|||++....++.++||||+||++|||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G 235 (364)
T cd05599 156 RTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235 (364)
T ss_pred cccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcC
Confidence 100000 0011234799999999999989999999999999999999999
Q ss_pred CCCCCCCC
Q 001873 969 RHPLDPTL 976 (1001)
Q Consensus 969 ~~Pf~~~~ 976 (1001)
+.||....
T Consensus 236 ~~Pf~~~~ 243 (364)
T cd05599 236 YPPFCSDN 243 (364)
T ss_pred CCCCCCCC
Confidence 99997653
No 53
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=6.2e-34 Score=313.32 Aligned_cols=196 Identities=26% Similarity=0.383 Sum_probs=173.6
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
++|++.+.||+|+||+||+|+.. +++.||+|++.... ..+.+.+|+.++++++||||+++++++.++...++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36888999999999999999975 68999999985432 2356888999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
||+++|+|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~- 154 (291)
T cd05612 81 EYVPGGELFSYLRNS--GRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR- 154 (291)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccCC-
Confidence 999999999999764 3478899999999999999999998 9999999999999999999999999999865321
Q ss_pred CCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus 155 ---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~ 202 (291)
T cd05612 155 ---------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDN 202 (291)
T ss_pred ---------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 123468999999999999899999999999999999999999997653
No 54
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.2e-34 Score=296.76 Aligned_cols=209 Identities=24% Similarity=0.296 Sum_probs=180.4
Q ss_pred HhcccCCCeEeecCCeeEEEEEeCC-CCEEEEEEecCCC-----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEE
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIPN-GETLAVKKMWSSD-----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLF 838 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv 838 (1001)
.+.|+..+.||+|.-|+||+++.++ +..+|+|++.++. ...+...|-+|++.++||.++++++.++.++..|+|
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEE
Confidence 3567788899999999999999764 6899999985433 225677799999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCC
Q 001873 839 YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGS 918 (1001)
Q Consensus 839 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~ 918 (1001)
||||+||+|...++++..+.+++..++-++.+++-||+|||.. |||+|||||+||||.++|++.++||.++......
T Consensus 156 meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred EecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 9999999999999999888899999999999999999999998 9999999999999999999999999997654221
Q ss_pred CC--------------------------------CC-----------------CCCCCCCCcccccccccCccccccCCC
Q 001873 919 GD--------------------------------DN-----------------CSKTNQRPQLAGSYGYMAPEHASMQRI 949 (1001)
Q Consensus 919 ~~--------------------------------~~-----------------~~~~~~~~~~~gt~~y~aPE~~~~~~~ 949 (1001)
.. .. ..........+||.+|.|||++.+...
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 00 00 011122345689999999999999999
Q ss_pred CCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 950 TEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 950 ~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
+.++|-|+|||++|||+.|+.||.+..
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~ 339 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSN 339 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCC
Confidence 999999999999999999999998764
No 55
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=7.7e-34 Score=324.52 Aligned_cols=206 Identities=24% Similarity=0.324 Sum_probs=173.5
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC-----CchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS-----DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
++|++.++||+|+||+||+++.. +++.||||++... ...+.+.+|++++++++||||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 36888999999999999999864 7899999988542 22356788999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
||+++|+|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.+....
T Consensus 81 E~~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~ 155 (377)
T cd05629 81 EFLPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQH 155 (377)
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeeccccccccccc
Confidence 999999999999764 4478889999999999999999998 99999999999999999999999999997442211
Q ss_pred CCCC---------CC-------------------------------CCCCCcccccccccCccccccCCCCCccchHHHH
Q 001873 920 DDNC---------SK-------------------------------TNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFG 959 (1001)
Q Consensus 920 ~~~~---------~~-------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG 959 (1001)
.... .. .......+||+.|+|||++.+..++.++||||+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 235 (377)
T cd05629 156 DSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLG 235 (377)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecc
Confidence 0000 00 0001134799999999999989999999999999
Q ss_pred HHHHHHHhCCCCCCCCC
Q 001873 960 VVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 960 ~il~elltg~~Pf~~~~ 976 (1001)
|++|||++|+.||....
T Consensus 236 vil~elltG~~Pf~~~~ 252 (377)
T cd05629 236 AIMFECLIGWPPFCSEN 252 (377)
T ss_pred hhhhhhhcCCCCCCCCC
Confidence 99999999999997644
No 56
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.1e-33 Score=323.30 Aligned_cols=205 Identities=23% Similarity=0.293 Sum_probs=173.2
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEE
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYD 840 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e 840 (1001)
.|+.++.||+|+||+||+|+.. +++.||||++.... ..+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5788899999999999999864 68899999985432 23568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCC
Q 001873 841 YLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGD 920 (1001)
Q Consensus 841 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~ 920 (1001)
|+++|+|.+++.+. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++++||+|||+++.+.....
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~ 156 (381)
T cd05626 82 YIPGGDMMSLLIRM--EVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHN 156 (381)
T ss_pred cCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCcccccccc
Confidence 99999999999764 3478888899999999999999998 999999999999999999999999999864321100
Q ss_pred CCC----------------------------------------CCCCCCCcccccccccCccccccCCCCCccchHHHHH
Q 001873 921 DNC----------------------------------------SKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGV 960 (1001)
Q Consensus 921 ~~~----------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~ 960 (1001)
... .........+||+.|+|||++.+..++.++||||+||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~ 236 (381)
T cd05626 157 SKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGV 236 (381)
T ss_pred cccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhh
Confidence 000 0000112457999999999999889999999999999
Q ss_pred HHHHHHhCCCCCCCCC
Q 001873 961 VLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 961 il~elltg~~Pf~~~~ 976 (1001)
++|||++|+.||....
T Consensus 237 il~elltG~~Pf~~~~ 252 (381)
T cd05626 237 ILFEMLVGQPPFLAPT 252 (381)
T ss_pred HHHHHHhCCCCCcCCC
Confidence 9999999999998654
No 57
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=9.2e-34 Score=317.98 Aligned_cols=197 Identities=24% Similarity=0.309 Sum_probs=173.4
Q ss_pred HhcccCCCeEeecCCeeEEEEEeCC--CCEEEEEEecCC-----CchhhHHHHHHHhhccCCCceeeEEeeeecCCceEE
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIPN--GETLAVKKMWSS-----DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLL 837 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~~~~~-----~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~l 837 (1001)
.++|++.+.||+|+||.||+|+.+. +..||+|++... ...+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 3568999999999999999998543 368999988432 233568889999999999999999999999999999
Q ss_pred EEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccC
Q 001873 838 FYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSG 917 (1001)
Q Consensus 838 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~ 917 (1001)
||||+++|+|.+++.+. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++++||+|||+++.+..
T Consensus 109 v~Ey~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 99999999999999864 3588999999999999999999998 999999999999999999999999999986532
Q ss_pred CCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 918 SGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 918 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
. .....||+.|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus 184 ~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 232 (340)
T PTZ00426 184 R----------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANE 232 (340)
T ss_pred C----------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCC
Confidence 1 123479999999999998889999999999999999999999997643
No 58
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.1e-33 Score=323.74 Aligned_cols=205 Identities=24% Similarity=0.315 Sum_probs=173.0
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEE
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYD 840 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e 840 (1001)
.|+.+++||+|+||+||+|+.. +++.||||++.... ..+.+.+|+.++++++||||+++++.+.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5788999999999999999864 68899999985432 23568889999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCC
Q 001873 841 YLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGD 920 (1001)
Q Consensus 841 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~ 920 (1001)
|+++|+|.+++.+. ..+++..+..++.||+.|++|||++ +|+||||||+|||++.++++||+|||+|+.+.....
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~ 156 (382)
T cd05625 82 YIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (382)
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCcccccccc
Confidence 99999999999764 3478888899999999999999998 999999999999999999999999999864321100
Q ss_pred CCC----------------------------------------CCCCCCCcccccccccCccccccCCCCCccchHHHHH
Q 001873 921 DNC----------------------------------------SKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGV 960 (1001)
Q Consensus 921 ~~~----------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~ 960 (1001)
... .........+||+.|+|||++.+..++.++||||+||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGv 236 (382)
T cd05625 157 SKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 236 (382)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechH
Confidence 000 0000112357999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCC
Q 001873 961 VLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 961 il~elltg~~Pf~~~~ 976 (1001)
++|||++|+.||....
T Consensus 237 il~elltG~~Pf~~~~ 252 (382)
T cd05625 237 ILYEMLVGQPPFLAQT 252 (382)
T ss_pred HHHHHHhCCCCCCCCC
Confidence 9999999999998654
No 59
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1e-33 Score=316.98 Aligned_cols=196 Identities=25% Similarity=0.342 Sum_probs=174.1
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC-----CchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEE
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS-----DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLF 838 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv 838 (1001)
.++|++.+.||+|+||+||+|+.. +++.||||++... ...+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence 357889999999999999999975 6899999988542 2235688999999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCC
Q 001873 839 YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGS 918 (1001)
Q Consensus 839 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~ 918 (1001)
|||+++|+|.+++.+. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 97 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 171 (329)
T PTZ00263 97 LEFVVGGELFTHLRKA--GRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR 171 (329)
T ss_pred EcCCCCChHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCCC
Confidence 9999999999999864 3478888899999999999999998 9999999999999999999999999999865321
Q ss_pred CCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 919 GDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 919 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 172 ----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~ 218 (329)
T PTZ00263 172 ----------TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDD 218 (329)
T ss_pred ----------cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCC
Confidence 12347999999999999999999999999999999999999999754
No 60
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.2e-33 Score=322.90 Aligned_cols=206 Identities=25% Similarity=0.339 Sum_probs=173.8
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC-----CchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEE
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS-----DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYD 840 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e 840 (1001)
.|++.+.||+|+||+||+++.. +++.||||++... ...+.+.+|++++++++||||+++++.+.+++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 6889999999999999999865 6899999998542 233568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCC
Q 001873 841 YLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGD 920 (1001)
Q Consensus 841 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~ 920 (1001)
|+++|+|.+++.+. ..+++..+..++.||+.|++|||++ +|+||||||+||+++.++.+||+|||+|..+.....
T Consensus 82 ~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~ 156 (376)
T cd05598 82 YIPGGDMMSLLIRL--GIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (376)
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccc
Confidence 99999999999764 3478888889999999999999998 999999999999999999999999999854321100
Q ss_pred CCC------------------------------------CCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHH
Q 001873 921 DNC------------------------------------SKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLE 964 (1001)
Q Consensus 921 ~~~------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~e 964 (1001)
... .........+||+.|||||++.+..++.++||||+||++||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilye 236 (376)
T cd05598 157 SKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 236 (376)
T ss_pred ccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeee
Confidence 000 00001123579999999999999999999999999999999
Q ss_pred HHhCCCCCCCCCC
Q 001873 965 VLTGRHPLDPTLP 977 (1001)
Q Consensus 965 lltg~~Pf~~~~~ 977 (1001)
|++|+.||....+
T Consensus 237 ll~G~~Pf~~~~~ 249 (376)
T cd05598 237 MLVGQPPFLADTP 249 (376)
T ss_pred hhhCCCCCCCCCH
Confidence 9999999987643
No 61
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=2.3e-33 Score=313.45 Aligned_cols=192 Identities=23% Similarity=0.285 Sum_probs=168.2
Q ss_pred CeEeecCCeeEEEEEeC-CCCEEEEEEecCC-----CchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCCC
Q 001873 772 NVIGTGSSGVVYRVTIP-NGETLAVKKMWSS-----DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNG 845 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 845 (1001)
+.||+|+||+||+++.. +++.||||++... .....+.+|+.++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999864 6899999988643 22356778999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCCC
Q 001873 846 SLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSK 925 (1001)
Q Consensus 846 sL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~ 925 (1001)
+|.+++... ..+++..+..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~------- 148 (323)
T cd05571 81 ELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD------- 148 (323)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC-------
Confidence 999999764 4578999999999999999999998 9999999999999999999999999998753211
Q ss_pred CCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 926 TNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 926 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.......+||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 149 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~ 198 (323)
T cd05571 149 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 198 (323)
T ss_pred CCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCC
Confidence 11223457999999999999999999999999999999999999999754
No 62
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.4e-33 Score=318.15 Aligned_cols=199 Identities=25% Similarity=0.316 Sum_probs=171.8
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC-----CchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEE
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS-----DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLF 838 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv 838 (1001)
.++|++.+.||+|+||.||+++.. +++.||+|.+... ...+.+.+|+.+++.++||||+++++++.+++..++|
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv 121 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMV 121 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 367999999999999999999976 5889999988531 2235678899999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCC
Q 001873 839 YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGS 918 (1001)
Q Consensus 839 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~ 918 (1001)
|||+++|+|.+++... .+++..+..++.||+.|++|||+. +|+||||||+||++++++.+||+|||+|..+...
T Consensus 122 ~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~ 195 (370)
T cd05621 122 MEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDET 195 (370)
T ss_pred EcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccceecccC
Confidence 9999999999999753 478888999999999999999998 9999999999999999999999999999875322
Q ss_pred CCCCCCCCCCCCcccccccccCccccccC----CCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 919 GDDNCSKTNQRPQLAGSYGYMAPEHASMQ----RITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 919 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.. .......||+.|+|||++... .++.++||||+||++|||++|+.||...
T Consensus 196 ~~------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~ 250 (370)
T cd05621 196 GM------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD 250 (370)
T ss_pred Cc------eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCC
Confidence 11 112345799999999998653 3788999999999999999999999754
No 63
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.8e-33 Score=316.02 Aligned_cols=196 Identities=26% Similarity=0.364 Sum_probs=174.4
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC-----CchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS-----DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
++|++.+.||+|+||.||+|+.. +++.||||++... .....+.+|+++++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36889999999999999999976 5899999998543 23356888999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
||+++|+|.+++... ..+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNL--GVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-- 153 (333)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc--
Confidence 999999999999764 3478899999999999999999998 999999999999999999999999999976432
Q ss_pred CCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
......||+.|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus 154 --------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~ 202 (333)
T cd05600 154 --------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGST 202 (333)
T ss_pred --------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCC
Confidence 2234579999999999998899999999999999999999999998654
No 64
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6e-34 Score=316.38 Aligned_cols=205 Identities=26% Similarity=0.346 Sum_probs=171.4
Q ss_pred cCCCeEeecCCeeEEEEEeCC--C---CEEEEEEecCCC-----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEE
Q 001873 769 TSANVIGTGSSGVVYRVTIPN--G---ETLAVKKMWSSD-----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLF 838 (1001)
Q Consensus 769 ~~~~~lG~G~fg~Vy~~~~~~--~---~~vavK~~~~~~-----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv 838 (1001)
...++||+|+||+||+|+.+. + .+||||..+.+. ...+|.+|+++|+.++|||||+++|++..+.++++|
T Consensus 160 ~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~iv 239 (474)
T KOG0194|consen 160 ELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLV 239 (474)
T ss_pred cccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEE
Confidence 344899999999999998643 2 238999887522 336899999999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCC
Q 001873 839 YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGS 918 (1001)
Q Consensus 839 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~ 918 (1001)
||+|+||+|.+++++.+. .++..++.+++.+.|+||+|||++ ++|||||.++|+|++.++.+||+|||+++.-.
T Consensus 240 mEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~-- 313 (474)
T KOG0194|consen 240 MELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGLSRAGS-- 313 (474)
T ss_pred EEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCccccccCCc--
Confidence 999999999999998643 689999999999999999999999 99999999999999999999999999987532
Q ss_pred CCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCcCcccch
Q 001873 919 GDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTLPGGAPLVQWT 986 (1001)
Q Consensus 919 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~~~~~~l~~~~ 986 (1001)
........ ..-..+|+|||.+....|+.++|||||||++||+++ |..||.+.... ++.+|+
T Consensus 314 -~~~~~~~~----~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~--~v~~kI 375 (474)
T KOG0194|consen 314 -QYVMKKFL----KKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY--EVKAKI 375 (474)
T ss_pred -ceeecccc----ccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH--HHHHHH
Confidence 01100101 123468999999999999999999999999999998 88899887533 344444
No 65
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.5e-33 Score=318.19 Aligned_cols=207 Identities=24% Similarity=0.331 Sum_probs=175.4
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC-----CchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS-----DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
++|+..+.||+|+||+||+++.. +++.||||++... .....+.+|+.++..++||+|+++++++.+.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36888999999999999999865 6899999998532 22356788999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
||+++|+|.+++.+. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++++||+|||+++.+....
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~ 155 (360)
T cd05627 81 EFLPGGDMMTLLMKK--DTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAH 155 (360)
T ss_pred eCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCccccccc
Confidence 999999999999764 3478999999999999999999998 99999999999999999999999999987653221
Q ss_pred CCCC----------------------------CCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCC
Q 001873 920 DDNC----------------------------SKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHP 971 (1001)
Q Consensus 920 ~~~~----------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~P 971 (1001)
.... .........+||+.|+|||++.+..++.++||||+||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P 235 (360)
T cd05627 156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (360)
T ss_pred ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence 1000 000111245799999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 001873 972 LDPTLP 977 (1001)
Q Consensus 972 f~~~~~ 977 (1001)
|....+
T Consensus 236 f~~~~~ 241 (360)
T cd05627 236 FCSETP 241 (360)
T ss_pred CCCCCH
Confidence 976543
No 66
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=5.3e-33 Score=313.09 Aligned_cols=203 Identities=29% Similarity=0.395 Sum_probs=168.5
Q ss_pred hcccCCCeEeecCCeeEEEEEe------CCCCEEEEEEecCCCc---hhhHHHHHHHhhcc-CCCceeeEEeeeecC-Cc
Q 001873 766 RNLTSANVIGTGSSGVVYRVTI------PNGETLAVKKMWSSDE---SGAFSSEIQTLGSI-RHKNIVRLLGWGSNK-NL 834 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~-~~ 834 (1001)
++|++.++||+|+||.||+|.+ .+++.||||++..... .+.+.+|+.+++++ +||||+++++++... +.
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (338)
T cd05102 7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGP 86 (338)
T ss_pred hHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCc
Confidence 5789999999999999999974 2356899999865332 35688999999999 899999999987654 46
Q ss_pred eEEEEEccCCCCHHHHhhcCCC----------------------------------------------------------
Q 001873 835 KLLFYDYLPNGSLSSLLHGAGK---------------------------------------------------------- 856 (1001)
Q Consensus 835 ~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 856 (1001)
.++||||+++|+|.+++.....
T Consensus 87 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (338)
T cd05102 87 LMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDL 166 (338)
T ss_pred eEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcccc
Confidence 7899999999999999975321
Q ss_pred --CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCCCCCCCCcccc
Q 001873 857 --GGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAG 934 (1001)
Q Consensus 857 --~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~g 934 (1001)
..+++.++.+++.|+++|++|||++ +|+||||||+||+++.++.+||+|||+++.+...... .......+
T Consensus 167 ~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~-----~~~~~~~~ 238 (338)
T cd05102 167 WKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY-----VRKGSARL 238 (338)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcch-----hcccCCCC
Confidence 2367788889999999999999998 9999999999999999999999999999865322111 11122346
Q ss_pred cccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 935 SYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 935 t~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
++.|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 239 ~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~ 281 (338)
T cd05102 239 PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQ 281 (338)
T ss_pred CccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCC
Confidence 688999999998899999999999999999997 999997643
No 67
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=6.9e-33 Score=309.45 Aligned_cols=192 Identities=24% Similarity=0.295 Sum_probs=167.6
Q ss_pred CeEeecCCeeEEEEEeC-CCCEEEEEEecCC-----CchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCCC
Q 001873 772 NVIGTGSSGVVYRVTIP-NGETLAVKKMWSS-----DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNG 845 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 845 (1001)
+.||+|+||.||+++.. +++.||+|++... .....+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46999999999999865 6899999998542 22356778999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCCC
Q 001873 846 SLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSK 925 (1001)
Q Consensus 846 sL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~ 925 (1001)
+|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~------- 148 (323)
T cd05595 81 ELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD------- 148 (323)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCC-------
Confidence 999998764 3578999999999999999999998 9999999999999999999999999998753211
Q ss_pred CCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 926 TNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 926 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
........||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 149 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~ 198 (323)
T cd05595 149 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 198 (323)
T ss_pred CCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCC
Confidence 11122357999999999999899999999999999999999999999754
No 68
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-33 Score=331.11 Aligned_cols=203 Identities=31% Similarity=0.438 Sum_probs=171.4
Q ss_pred hcccCCCeEeecCCeeEEEEEeCC--C----CEEEEEEecCC---CchhhHHHHHHHhhccCCCceeeEEeeeecCCceE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIPN--G----ETLAVKKMWSS---DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKL 836 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~~--~----~~vavK~~~~~---~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~ 836 (1001)
+..+..+.||+|+||.||.|...+ + .+||||.+... .+..+|.+|..+|+.++|||||+++|+|-+.+..+
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~ 771 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL 771 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence 345567789999999999998643 3 35999988543 34478999999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHhhcCC-----CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccc
Q 001873 837 LFYDYLPNGSLSSLLHGAG-----KGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGL 911 (1001)
Q Consensus 837 lv~e~~~~gsL~~~l~~~~-----~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgl 911 (1001)
|++|||++|+|..||++.+ ...++..+...++.|||+|++||+++ ++|||||..+|+|++....+||+|||+
T Consensus 772 i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDFGl 848 (1025)
T KOG1095|consen 772 ILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADFGL 848 (1025)
T ss_pred EEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEcccch
Confidence 9999999999999998753 33468889999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 912 ARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 912 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
|+.+....++.... .. .-..+|||||.+..+.++.|+|||||||++||++| |..||....
T Consensus 849 ArDiy~~~yyr~~~-~a----~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~ 909 (1025)
T KOG1095|consen 849 ARDIYDKDYYRKHG-EA----MLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRS 909 (1025)
T ss_pred hHhhhhchheeccC-cc----ccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcc
Confidence 99654433322111 11 12358999999999999999999999999999999 888887653
No 69
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-34 Score=303.36 Aligned_cols=200 Identities=28% Similarity=0.386 Sum_probs=176.7
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC---CchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS---DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
..|+..++||+|.||.||+|.+. .++.||+|++.-+ .+.+++++|+.++..++++||.++++.+..+...|++|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 35677789999999999999854 6899999998543 3447889999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
|.||++.+.++.. ..+++..+..|++++..|+.|+|.+ +.+|||||+.||++..+|.+|++|||.+.++...
T Consensus 93 ~~gGsv~~lL~~~--~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~--- 164 (467)
T KOG0201|consen 93 CGGGSVLDLLKSG--NILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNT--- 164 (467)
T ss_pred hcCcchhhhhccC--CCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeech---
Confidence 9999999999853 2247777778899999999999999 9999999999999999999999999999877532
Q ss_pred CCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~ 977 (1001)
...+.+.+|||.|||||++....|+.|+||||||++.+||.+|.+|+....|
T Consensus 165 ----~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP 216 (467)
T KOG0201|consen 165 ----VKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP 216 (467)
T ss_pred ----hhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc
Confidence 2233677999999999999999999999999999999999999999987654
No 70
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=9.3e-33 Score=308.99 Aligned_cols=192 Identities=24% Similarity=0.303 Sum_probs=168.1
Q ss_pred CeEeecCCeeEEEEEeC-CCCEEEEEEecCC-----CchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCCC
Q 001873 772 NVIGTGSSGVVYRVTIP-NGETLAVKKMWSS-----DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNG 845 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 845 (1001)
+.||+|+||.||+++.. +++.||||++... .....+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999865 6899999998643 23356788999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCCC
Q 001873 846 SLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSK 925 (1001)
Q Consensus 846 sL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~ 925 (1001)
+|.+++... ..+++..+..++.||+.|++|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~------- 148 (328)
T cd05593 81 ELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD------- 148 (328)
T ss_pred CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCc-------
Confidence 999998764 3588999999999999999999998 9999999999999999999999999998753211
Q ss_pred CCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 926 TNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 926 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
........||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 149 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~ 198 (328)
T cd05593 149 AATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 198 (328)
T ss_pred ccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCC
Confidence 11223357999999999999889999999999999999999999999754
No 71
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=8.6e-33 Score=307.38 Aligned_cols=190 Identities=26% Similarity=0.309 Sum_probs=166.6
Q ss_pred EeecCCeeEEEEEeC-CCCEEEEEEecCC-----CchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCCCCH
Q 001873 774 IGTGSSGVVYRVTIP-NGETLAVKKMWSS-----DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSL 847 (1001)
Q Consensus 774 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 847 (1001)
||+|+||+||+|+.. +++.||+|++... .....+.+|+.++++++||||+++++++.+.+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999875 5889999988532 2335678899999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCCCCC
Q 001873 848 SSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927 (1001)
Q Consensus 848 ~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~~~ 927 (1001)
.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++..... ..
T Consensus 81 ~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~-------~~ 148 (312)
T cd05585 81 FHHLQRE--GRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD-------DD 148 (312)
T ss_pred HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccC-------CC
Confidence 9999764 3488999999999999999999998 9999999999999999999999999998753221 11
Q ss_pred CCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 928 QRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 928 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 149 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~ 196 (312)
T cd05585 149 KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDE 196 (312)
T ss_pred ccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCC
Confidence 223457999999999999999999999999999999999999999754
No 72
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=8.1e-33 Score=314.24 Aligned_cols=199 Identities=25% Similarity=0.306 Sum_probs=171.7
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC-----CchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEE
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS-----DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLF 838 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv 838 (1001)
.++|++.+.||+|+||.||+++.+ +++.||+|.+... ...+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 42 ~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv 121 (371)
T cd05622 42 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMV 121 (371)
T ss_pred hhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 368999999999999999999976 6889999987532 2234578899999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCC
Q 001873 839 YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGS 918 (1001)
Q Consensus 839 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~ 918 (1001)
|||+++|+|.++++.. .+++..+..++.||+.|++|||++ +|+||||||+||+++.++++||+|||+++.....
T Consensus 122 ~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~ 195 (371)
T cd05622 122 MEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE 195 (371)
T ss_pred EcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcC
Confidence 9999999999999753 478888889999999999999998 9999999999999999999999999999875422
Q ss_pred CCCCCCCCCCCCcccccccccCccccccC----CCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 919 GDDNCSKTNQRPQLAGSYGYMAPEHASMQ----RITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 919 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.. .......||+.|+|||++... .++.++||||+||++|||++|+.||...
T Consensus 196 ~~------~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~ 250 (371)
T cd05622 196 GM------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD 250 (371)
T ss_pred Cc------ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCC
Confidence 11 112345799999999998653 3789999999999999999999999864
No 73
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=9.9e-33 Score=313.64 Aligned_cols=200 Identities=26% Similarity=0.310 Sum_probs=171.5
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC-----CchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEE
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS-----DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLF 838 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv 838 (1001)
.++|++.+.||+|+||+||+++.. +++.||+|++... ...+.+.+|+.+++.++||||+++++++.+....++|
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence 357899999999999999999875 6889999998532 2234577899999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCC
Q 001873 839 YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGS 918 (1001)
Q Consensus 839 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~ 918 (1001)
|||+++|+|.+++... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++.....
T Consensus 122 ~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~ 195 (370)
T cd05596 122 MEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDAN 195 (370)
T ss_pred EcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeeccCC
Confidence 9999999999999753 478888889999999999999998 9999999999999999999999999999865422
Q ss_pred CCCCCCCCCCCCcccccccccCccccccC----CCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 919 GDDNCSKTNQRPQLAGSYGYMAPEHASMQ----RITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 919 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
.. .......||+.|+|||++... .++.++||||+||++|||++|+.||....
T Consensus 196 ~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~ 251 (370)
T cd05596 196 GM------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 251 (370)
T ss_pred Cc------ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCC
Confidence 11 112234799999999988643 47889999999999999999999998643
No 74
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-33 Score=312.56 Aligned_cols=200 Identities=30% Similarity=0.415 Sum_probs=172.6
Q ss_pred ccCCCeEeecCCeeEEEEEe-CCCCEEEEEEecC---CCchhhHHHHHHHhhccCCCceeeEEeeeecC------CceEE
Q 001873 768 LTSANVIGTGSSGVVYRVTI-PNGETLAVKKMWS---SDESGAFSSEIQTLGSIRHKNIVRLLGWGSNK------NLKLL 837 (1001)
Q Consensus 768 ~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~---~~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~------~~~~l 837 (1001)
|...+.||+|+||.||+|+. ..|+.||||.+.. ....+...+|++++++++|||||+.++.-... ....+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 44556799999999999995 4799999999866 44557788999999999999999999976543 35689
Q ss_pred EEEccCCCCHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEEC--CCC--cEEEeccccc
Q 001873 838 FYDYLPNGSLSSLLHGAG-KGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLG--PGY--QAYLADFGLA 912 (1001)
Q Consensus 838 v~e~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~--~~~--~~ki~Dfgla 912 (1001)
|||||.||||+..+++.. ..++++.+.+.+..+++.||.|||++ +|+||||||.||++- ++| .-||+|||+|
T Consensus 95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 999999999999998753 35689999999999999999999988 999999999999983 334 5799999999
Q ss_pred ccccCCCCCCCCCCCCCCcccccccccCccccc-cCCCCCccchHHHHHHHHHHHhCCCCCCCCCCC
Q 001873 913 RIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHAS-MQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978 (1001)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~~ 978 (1001)
+.++.+ ......+||+.|.|||... .+.|+..+|.|||||++|+..||..||.|...+
T Consensus 172 rel~d~--------s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~p 230 (732)
T KOG4250|consen 172 RELDDN--------SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGP 230 (732)
T ss_pred ccCCCC--------CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCc
Confidence 987532 3556789999999999998 489999999999999999999999999987544
No 75
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-33 Score=282.53 Aligned_cols=199 Identities=26% Similarity=0.351 Sum_probs=171.3
Q ss_pred CeEeecCCeeEEEEE-eCCCCEEEEEEecCCC--chhhHHHHHHHhhcc-CCCceeeEEeeeecCCceEEEEEccCCCCH
Q 001873 772 NVIGTGSSGVVYRVT-IPNGETLAVKKMWSSD--ESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPNGSL 847 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 847 (1001)
+.||+|+||.|-... ..+|..||||++.+.. ...+..+|++++..+ .|+||+++++||.++...|+|||-|.||+|
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGpl 163 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPL 163 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchH
Confidence 469999999998755 6789999999985543 346788999999999 499999999999999999999999999999
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCC---cEEEecccccccccCCCCCCCC
Q 001873 848 SSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGY---QAYLADFGLARIVSGSGDDNCS 924 (1001)
Q Consensus 848 ~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~---~~ki~Dfgla~~~~~~~~~~~~ 924 (1001)
..+|+++ ..+++.++.+++.+|+.|+++||.+ ||.|||+||+|||..+.. -+|||||.++..+....+-...
T Consensus 164 LshI~~~--~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spa 238 (463)
T KOG0607|consen 164 LSHIQKR--KHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPA 238 (463)
T ss_pred HHHHHHh--hhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCC
Confidence 9999874 4589999999999999999999999 999999999999997544 5899999998766544433344
Q ss_pred CCCCCCcccccccccCcccc-----ccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 925 KTNQRPQLAGSYGYMAPEHA-----SMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 925 ~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.+....+.+|+..|||||+. ....|+.+.|.||+|||+|-|++|+.||-+.
T Consensus 239 stP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~ 294 (463)
T KOG0607|consen 239 STPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGH 294 (463)
T ss_pred CCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCc
Confidence 44555677899999999975 2357899999999999999999999999875
No 76
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=2.1e-32 Score=306.04 Aligned_cols=198 Identities=24% Similarity=0.301 Sum_probs=170.0
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC-----CchhhHHHHHHHhhccCC-CceeeEEeeeecCCceEEEE
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS-----DESGAFSSEIQTLGSIRH-KNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~Ei~~l~~l~h-~nIv~l~~~~~~~~~~~lv~ 839 (1001)
+|++.+.||+|+||+||+|+.. +++.||||++... ...+.+..|+++++.++| ++|+++++++...+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4788899999999999999865 5789999988542 233567889999999976 56888999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
||+++|+|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~- 154 (324)
T cd05587 81 EYVNGGDLMYHIQQV--GKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG- 154 (324)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCCC-
Confidence 999999999999764 3478899999999999999999998 9999999999999999999999999998743211
Q ss_pred CCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
........||+.|+|||++.+..++.++||||+||++|||+||+.||....
T Consensus 155 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~ 205 (324)
T cd05587 155 ------GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED 205 (324)
T ss_pred ------CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC
Confidence 112234579999999999999999999999999999999999999997643
No 77
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=5.6e-33 Score=314.63 Aligned_cols=206 Identities=26% Similarity=0.339 Sum_probs=177.6
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC-----CchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS-----DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
++|++.+.||+|+||+||+|+.. +++.||||++... .....+.+|+++++.++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 36888999999999999999975 6899999998542 23457889999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
||+++++|.+++.+. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..+....
T Consensus 81 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 155 (350)
T cd05573 81 EYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAK 155 (350)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCcccC
Confidence 999999999999864 4588999999999999999999998 99999999999999999999999999998765432
Q ss_pred CC----------------------CCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 920 DD----------------------NCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 920 ~~----------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
.. ............||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~ 234 (350)
T cd05573 156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT 234 (350)
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC
Confidence 00 0000112234579999999999999999999999999999999999999998654
No 78
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.8e-32 Score=306.21 Aligned_cols=192 Identities=27% Similarity=0.379 Sum_probs=166.5
Q ss_pred CeEeecCCeeEEEEEe----CCCCEEEEEEecCC------CchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 772 NVIGTGSSGVVYRVTI----PNGETLAVKKMWSS------DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~----~~~~~vavK~~~~~------~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
+.||+|+||.||+++. ..++.||||.+... .....+.+|+.+++.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 6799999999999975 35789999988542 1224577899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
+++|+|.+++.+. ..+.+..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 154 (323)
T cd05584 82 LSGGELFMHLERE--GIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG-- 154 (323)
T ss_pred CCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC--
Confidence 9999999999764 3478888889999999999999998 99999999999999999999999999987542211
Q ss_pred CCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 155 -----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~ 203 (323)
T cd05584 155 -----TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAE 203 (323)
T ss_pred -----CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCC
Confidence 1123357999999999999888999999999999999999999999764
No 79
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.5e-32 Score=307.87 Aligned_cols=200 Identities=27% Similarity=0.316 Sum_probs=171.4
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC-----CchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS-----DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
++|++.+.||+|+||+||+++.. +++.||||++... ...+.+.+|+.+++.++|+||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 36889999999999999999965 5899999998531 22356888999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
||+++|+|.+++.+. ...+++..+..++.||+.|++|||++ +|+||||||+||+++.++++||+|||++..+....
T Consensus 81 e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG 156 (331)
T ss_pred ecCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCCCC
Confidence 999999999999753 33578899999999999999999998 99999999999999999999999999987654321
Q ss_pred CCCCCCCCCCCcccccccccCcccccc-----CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHASM-----QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
. .......||+.|+|||++.. ..++.++||||+||++|||++|+.||...
T Consensus 157 ~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~ 211 (331)
T cd05597 157 T------VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 211 (331)
T ss_pred C------ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCC
Confidence 1 11122469999999999863 45788999999999999999999999754
No 80
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=2.3e-32 Score=300.37 Aligned_cols=199 Identities=23% Similarity=0.329 Sum_probs=170.3
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC---chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD---ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
++|++.++||+|+||+||+|+.+ +++.||+|++.... ....+.+|++++++++||||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 46899999999999999999865 68999999886432 234678999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
++ |+|.+++...+ ...++..+..++.||+.|++|||++ +|+||||||+||++++++.+||+|||+++......
T Consensus 85 ~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~-- 157 (288)
T cd07871 85 LD-SDLKQYLDNCG-NLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVPT-- 157 (288)
T ss_pred CC-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCCC--
Confidence 97 59999987542 3468889999999999999999998 99999999999999999999999999997643211
Q ss_pred CCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
.......|++.|+|||++.+ ..++.++||||+||++|||+||+.||....
T Consensus 158 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~ 208 (288)
T cd07871 158 -----KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGST 208 (288)
T ss_pred -----ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 11223468999999998865 568999999999999999999999997643
No 81
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=2.2e-32 Score=305.78 Aligned_cols=196 Identities=26% Similarity=0.351 Sum_probs=168.1
Q ss_pred ccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC-----CchhhHHHHHHHh---hccCCCceeeEEeeeecCCceEEE
Q 001873 768 LTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS-----DESGAFSSEIQTL---GSIRHKNIVRLLGWGSNKNLKLLF 838 (1001)
Q Consensus 768 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~Ei~~l---~~l~h~nIv~l~~~~~~~~~~~lv 838 (1001)
|++.+.||+|+||.||+|+.. +++.||||++... ...+.+.+|++++ ++++||||+++++++...+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 667889999999999999865 6899999998642 2234566676655 566899999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCC
Q 001873 839 YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGS 918 (1001)
Q Consensus 839 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~ 918 (1001)
|||+++|+|..++++ ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 81 ~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05589 81 MEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF 154 (324)
T ss_pred EcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCCCC
Confidence 999999999998864 3589999999999999999999998 9999999999999999999999999998753221
Q ss_pred CCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 919 GDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 919 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
........||+.|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 155 -------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~ 205 (324)
T cd05589 155 -------GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDD 205 (324)
T ss_pred -------CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCC
Confidence 112234579999999999999999999999999999999999999998643
No 82
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.2e-32 Score=308.63 Aligned_cols=200 Identities=26% Similarity=0.302 Sum_probs=171.5
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC-----CchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS-----DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
++|++.+.||+|+||+||+++.. +++.||+|.+... .....+.+|+.+++.++|++|+++++++.+.+..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36889999999999999999975 6789999988532 22345788999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
||+++|+|.+++.+. ...+++..+..++.|++.|++|+|+. +|+||||||+||+++.++.+||+|||+++.+....
T Consensus 81 Ey~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG 156 (331)
T ss_pred eCCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccCCC
Confidence 999999999999864 23578889999999999999999998 99999999999999999999999999998654321
Q ss_pred CCCCCCCCCCCcccccccccCcccccc-----CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHASM-----QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
. .......||+.|+|||++.. ..++.++||||+||++|||++|+.||...
T Consensus 157 ~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~ 211 (331)
T cd05624 157 T------VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE 211 (331)
T ss_pred c------eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCC
Confidence 1 11123469999999998865 56788999999999999999999999754
No 83
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2.5e-32 Score=305.20 Aligned_cols=198 Identities=23% Similarity=0.302 Sum_probs=169.8
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhcc-CCCceeeEEeeeecCCceEEEE
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
+|++.+.||+|+||+||+|+.. +++.||||.+.... ..+.+..|..++..+ +|++|+++++++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4778899999999999999875 57899999886432 224566788888777 5899999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
||+++|+|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~ 155 (323)
T cd05616 81 EYVNGGDLMYQIQQV--GRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG 155 (323)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCCCC
Confidence 999999999999764 3478999999999999999999998 99999999999999999999999999987542211
Q ss_pred CCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
.......||+.|+|||++.+..++.++|||||||++|||+||+.||....
T Consensus 156 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~ 205 (323)
T cd05616 156 -------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED 205 (323)
T ss_pred -------CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCC
Confidence 11234579999999999999999999999999999999999999998653
No 84
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=3.2e-32 Score=301.75 Aligned_cols=198 Identities=25% Similarity=0.344 Sum_probs=169.8
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
++|++.+.||+|+||+||+|+.. +++.||||++..... ...+.+|+.++++++||||+++++++.++...++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEY 84 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEEC
Confidence 57999999999999999999976 689999999864322 24678899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
++ ++|.+++.+. ...+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 85 ~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 157 (303)
T cd07869 85 VH-TDLCQYMDKH-PGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSVPS-- 157 (303)
T ss_pred CC-cCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccCCC--
Confidence 96 6888888754 34578889999999999999999998 99999999999999999999999999987542211
Q ss_pred CCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.
T Consensus 158 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 207 (303)
T cd07869 158 -----HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGM 207 (303)
T ss_pred -----ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 11223468999999998765 56889999999999999999999999864
No 85
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2.6e-32 Score=305.63 Aligned_cols=191 Identities=23% Similarity=0.308 Sum_probs=166.8
Q ss_pred CeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhcc-CCCceeeEEeeeecCCceEEEEEccCC
Q 001873 772 NVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPN 844 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~ 844 (1001)
++||+|+||+||+++.. +++.||||+++... ..+.+.+|..+++.+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999865 68899999986421 234578899999888 799999999999999999999999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCC
Q 001873 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924 (1001)
Q Consensus 845 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~ 924 (1001)
|+|.+++.+. ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~------ 149 (329)
T cd05588 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP------ 149 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccC------
Confidence 9999998754 4589999999999999999999998 9999999999999999999999999998743211
Q ss_pred CCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCC
Q 001873 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974 (1001)
Q Consensus 925 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~ 974 (1001)
........||+.|+|||++.+..++.++||||+||++|||++|+.||+.
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 198 (329)
T cd05588 150 -GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 198 (329)
T ss_pred -CCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccc
Confidence 1122345799999999999999999999999999999999999999974
No 86
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=3.1e-32 Score=303.25 Aligned_cols=192 Identities=27% Similarity=0.387 Sum_probs=164.5
Q ss_pred CeEeecCCeeEEEEEeC-CCCEEEEEEecCC-----CchhhHHHHHHHhhcc-CCCceeeEEeeeecCCceEEEEEccCC
Q 001873 772 NVIGTGSSGVVYRVTIP-NGETLAVKKMWSS-----DESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPN 844 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~ 844 (1001)
+.||+|+||+||+|+.. +++.||||.++.. ...+.+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999865 5889999988642 2234556677776654 899999999999999999999999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCC
Q 001873 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924 (1001)
Q Consensus 845 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~ 924 (1001)
|+|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~----- 150 (316)
T cd05592 81 GDLMFHIQSS--GRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE----- 150 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-----
Confidence 9999999764 3488899999999999999999998 99999999999999999999999999997542211
Q ss_pred CCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 925 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~ 199 (316)
T cd05592 151 --GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGE 199 (316)
T ss_pred --CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCC
Confidence 1223457999999999999889999999999999999999999999764
No 87
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-34 Score=287.99 Aligned_cols=197 Identities=26% Similarity=0.379 Sum_probs=178.4
Q ss_pred ccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCCCC
Q 001873 768 LTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGS 846 (1001)
Q Consensus 768 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs 846 (1001)
|.++.+||+|+||.||++.++ .|+.||+|++.-+.+-+++..|+.+|++++.|+||+++|.+......|+|||||--|+
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGS 114 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGS 114 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCc
Confidence 456678999999999999876 6999999999888888999999999999999999999998777778999999999999
Q ss_pred HHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCCCC
Q 001873 847 LSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKT 926 (1001)
Q Consensus 847 L~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~~ 926 (1001)
..|.++.. ++.+++.++..+.+..++|++|||.. .-||||||+.|||++.+|++|++|||.|..+.. ..
T Consensus 115 iSDI~R~R-~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTD-------TM 183 (502)
T KOG0574|consen 115 ISDIMRAR-RKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTD-------TM 183 (502)
T ss_pred HHHHHHHh-cCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhh-------hH
Confidence 99999864 56789999999999999999999997 789999999999999999999999999987642 12
Q ss_pred CCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 927 NQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 927 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
..+.++.|||.|||||++..-.|+.++||||+|+...||..|++||..-
T Consensus 184 AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDI 232 (502)
T KOG0574|consen 184 AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDI 232 (502)
T ss_pred HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccc
Confidence 3456678999999999999999999999999999999999999998754
No 88
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2e-32 Score=301.00 Aligned_cols=198 Identities=24% Similarity=0.339 Sum_probs=170.9
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
+|++.+.||+|+||+||+++.+ +++.||||++.... ..+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY 81 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence 6889999999999999999976 58899999886432 235678999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
++++.+..+... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~- 155 (287)
T cd07848 82 VEKNMLELLEEM--PNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN- 155 (287)
T ss_pred CCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccccccccc-
Confidence 998777665543 34588999999999999999999998 999999999999999999999999999987532211
Q ss_pred CCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 156 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~ 204 (287)
T cd07848 156 -----ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGE 204 (287)
T ss_pred -----ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCC
Confidence 1122346899999999998888999999999999999999999999764
No 89
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=2.8e-32 Score=304.18 Aligned_cols=193 Identities=24% Similarity=0.325 Sum_probs=166.8
Q ss_pred CeEeecCCeeEEEEEeC-CCCEEEEEEecCC-----CchhhHHHHHHHhhcc-CCCceeeEEeeeecCCceEEEEEccCC
Q 001873 772 NVIGTGSSGVVYRVTIP-NGETLAVKKMWSS-----DESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPN 844 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~ 844 (1001)
+.||+|+||+||+|+.+ +++.||||++... ...+.+.+|..+++.. +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999975 5889999988532 2335677888888776 699999999999999999999999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCC
Q 001873 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924 (1001)
Q Consensus 845 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~ 924 (1001)
|+|.+++.+. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 g~L~~~i~~~--~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~------ 149 (320)
T cd05590 81 GDLMFHIQKS--RRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN------ 149 (320)
T ss_pred chHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC------
Confidence 9999999764 3488999999999999999999998 9999999999999999999999999998753211
Q ss_pred CCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 925 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
........||+.|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~ 200 (320)
T cd05590 150 -GKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAEN 200 (320)
T ss_pred -CCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCC
Confidence 112233579999999999998999999999999999999999999997653
No 90
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=4e-32 Score=304.53 Aligned_cols=197 Identities=27% Similarity=0.397 Sum_probs=173.4
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
++|++.+.||+|+||.||+++.+ ++..||+|.+..... ...+.+|++++++++||||+++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence 57899999999999999999976 688899998865422 25788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
+++|+|.+++... ..+++..+..++.|++.|+.|||+++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 157 (331)
T cd06649 85 MDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 157 (331)
T ss_pred CCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccccccccc---
Confidence 9999999999764 34789999999999999999999852 6999999999999999999999999998765321
Q ss_pred CCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 158 ------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~ 205 (331)
T cd06649 158 ------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPP 205 (331)
T ss_pred ------ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 122346899999999999989999999999999999999999999653
No 91
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-32 Score=304.50 Aligned_cols=201 Identities=25% Similarity=0.354 Sum_probs=180.5
Q ss_pred HHHHhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc-----hhhHHHHHHHhhccC-CCceeeEEeeeecCCc
Q 001873 762 DDVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE-----SGAFSSEIQTLGSIR-HKNIVRLLGWGSNKNL 834 (1001)
Q Consensus 762 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~Ei~~l~~l~-h~nIv~l~~~~~~~~~ 834 (1001)
.++...|++.+.||+|.||.||+++.+ +|+.+|+|.+.+... ...+.+|+.+|+++. |||||.+++++.+...
T Consensus 31 ~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~ 110 (382)
T KOG0032|consen 31 EDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDS 110 (382)
T ss_pred ccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCe
Confidence 456678999999999999999999976 499999999865432 357899999999998 9999999999999999
Q ss_pred eEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECC----CCcEEEeccc
Q 001873 835 KLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGP----GYQAYLADFG 910 (1001)
Q Consensus 835 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~----~~~~ki~Dfg 910 (1001)
+++|||++.||.|.+.+.+. ..++.++..++.|++.|++|+|+. +|+|||+||+|+++.. ++.+|++|||
T Consensus 111 ~~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFG 184 (382)
T KOG0032|consen 111 VYLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFG 184 (382)
T ss_pred EEEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCC
Confidence 99999999999999999865 389999999999999999999998 9999999999999963 3589999999
Q ss_pred ccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 911 LARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 911 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
+|..... .......+||+.|+|||++....|+..+||||+||++|.|++|..||.+..
T Consensus 185 la~~~~~--------~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~ 242 (382)
T KOG0032|consen 185 LAKFIKP--------GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGET 242 (382)
T ss_pred CceEccC--------CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCC
Confidence 9998643 234556799999999999999999999999999999999999999999875
No 92
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.6e-32 Score=307.07 Aligned_cols=192 Identities=24% Similarity=0.296 Sum_probs=166.9
Q ss_pred CeEeecCCeeEEEEEeC-CCCEEEEEEecCC-----CchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCCC
Q 001873 772 NVIGTGSSGVVYRVTIP-NGETLAVKKMWSS-----DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNG 845 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 845 (1001)
+.||+|+||+||+++.. +++.||+|++... .....+.+|+++++.++||||+++.+++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999864 6899999998643 22356778999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCC
Q 001873 846 SLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHH-DCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924 (1001)
Q Consensus 846 sL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~-~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~ 924 (1001)
+|.+++... ..+++..+..++.|++.|++|||+ . +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~----- 150 (325)
T cd05594 81 ELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG----- 150 (325)
T ss_pred cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC-----
Confidence 999998754 358999999999999999999997 5 99999999999999999999999999987532211
Q ss_pred CCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 925 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~ 199 (325)
T cd05594 151 --ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 199 (325)
T ss_pred --cccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCC
Confidence 1122346999999999999899999999999999999999999999754
No 93
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-34 Score=278.53 Aligned_cols=197 Identities=28% Similarity=0.389 Sum_probs=170.7
Q ss_pred HhcccCCCeEeecCCeeEEEEE-eCCCCEEEEEEec----CCCchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 765 VRNLTSANVIGTGSSGVVYRVT-IPNGETLAVKKMW----SSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~----~~~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
.++|++.++||+|.|+.||+.. .++|+++|+|.+. .....+++.+|+++-+.++|||||++.+...+.+..|+|+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 4678888999999999999854 4579999998763 2335578999999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECC---CCcEEEeccccccccc
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGP---GYQAYLADFGLARIVS 916 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~---~~~~ki~Dfgla~~~~ 916 (1001)
|+|+|++|..=+-+. ...++..+-..++||+.|+.|+|.+ +|||||+||+|+++.. .--+|++|||+|..+.
T Consensus 90 e~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~ 164 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN 164 (355)
T ss_pred ecccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEEeC
Confidence 999999996654332 3358888889999999999999999 9999999999999953 3469999999999875
Q ss_pred CCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCC
Q 001873 917 GSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974 (1001)
Q Consensus 917 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~ 974 (1001)
. .......+|||+|||||+++..+|+.++|||+.|||+|-++.|+.||.+
T Consensus 165 ~--------g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~ 214 (355)
T KOG0033|consen 165 D--------GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 214 (355)
T ss_pred C--------ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCC
Confidence 1 2334456899999999999999999999999999999999999999987
No 94
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=3.8e-32 Score=298.20 Aligned_cols=198 Identities=25% Similarity=0.332 Sum_probs=173.1
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEE
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYD 840 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e 840 (1001)
.|++.++||+|+||+||++... +++.||||++.... ....+.+|+.++++++||||+++++++..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 3778899999999999999864 68999999885422 12457789999999999999999999999899999999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCC
Q 001873 841 YLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGD 920 (1001)
Q Consensus 841 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~ 920 (1001)
|+++|+|.+++.......+++..+..++.|++.|++|||+. +|+||||||+||++++++.++|+|||+++.+....
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 156 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE- 156 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC-
Confidence 99999999998765555689999999999999999999998 99999999999999999999999999998653211
Q ss_pred CCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 921 DNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 921 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
......|++.|+|||++.+..++.++||||+||++|||++|+.||.+.
T Consensus 157 -------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~ 204 (285)
T cd05605 157 -------TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQR 204 (285)
T ss_pred -------ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCC
Confidence 112346899999999998888999999999999999999999999864
No 95
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.3e-32 Score=306.93 Aligned_cols=198 Identities=25% Similarity=0.313 Sum_probs=169.3
Q ss_pred cccCCCeEeecCCeeEEEEEe----CCCCEEEEEEecCC------CchhhHHHHHHHhhcc-CCCceeeEEeeeecCCce
Q 001873 767 NLTSANVIGTGSSGVVYRVTI----PNGETLAVKKMWSS------DESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLK 835 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~----~~~~~vavK~~~~~------~~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~~~~ 835 (1001)
+|++.+.||+|+||+||+++. .+++.||+|++... ...+.+.+|+.+++++ +||+|+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 478889999999999999875 25789999988532 1234678899999999 599999999999999999
Q ss_pred EEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccc
Q 001873 836 LLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIV 915 (1001)
Q Consensus 836 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~ 915 (1001)
++||||+++|+|.+++.+. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.+
T Consensus 81 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~ 155 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (332)
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence 9999999999999999764 3488999999999999999999998 9999999999999999999999999999865
Q ss_pred cCCCCCCCCCCCCCCcccccccccCccccccC-CCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 916 SGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ-RITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
..... .......||+.|+|||++.+. .++.++|||||||++|||+||+.||...
T Consensus 156 ~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~ 210 (332)
T cd05614 156 LSEEK------ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLE 210 (332)
T ss_pred cccCC------CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCC
Confidence 32211 112235799999999998764 4788999999999999999999999754
No 96
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-33 Score=293.68 Aligned_cols=213 Identities=24% Similarity=0.273 Sum_probs=183.6
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecC-----CCchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWS-----SDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~-----~~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
..|+.-++||+|+||.||-.+.+ +|+.||.|++.+ ........+|-++++++..+.||.+--.|...+..|+|+
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL 264 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL 264 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence 34666789999999999998755 699999997633 233345778999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
..|.||+|.-+|...++..+++..+.-++.+|+.||++||.+ +||+||+||+|||+|+.|+++|+|.|+|..+..
T Consensus 265 tlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~-- 339 (591)
T KOG0986|consen 265 TLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIPE-- 339 (591)
T ss_pred EeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecCC--
Confidence 999999999999999888999999999999999999999999 999999999999999999999999999998743
Q ss_pred CCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcCcccchhhhhccc
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLML 993 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~~~~~l~~~~~~~~~~~ 993 (1001)
.......+||.+|||||++.+..|+...|-||+||++|||+.|+.||.... ..+.|.++...+.
T Consensus 340 ------g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~K----eKvk~eEvdrr~~ 403 (591)
T KOG0986|consen 340 ------GKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRK----EKVKREEVDRRTL 403 (591)
T ss_pred ------CCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhh----hhhhHHHHHHHHh
Confidence 233445599999999999999999999999999999999999999998543 3344444443333
No 97
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.9e-33 Score=276.02 Aligned_cols=201 Identities=25% Similarity=0.405 Sum_probs=174.1
Q ss_pred HHHHhcccCCCeEeecCCeeEEEEEe-CCCCEEEEEEecCCC------ch----hhHHHHHHHhhcc-CCCceeeEEeee
Q 001873 762 DDVVRNLTSANVIGTGSSGVVYRVTI-PNGETLAVKKMWSSD------ES----GAFSSEIQTLGSI-RHKNIVRLLGWG 829 (1001)
Q Consensus 762 ~~~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~------~~----~~~~~Ei~~l~~l-~h~nIv~l~~~~ 829 (1001)
++.-.+|...+++|+|..++|-+..+ ++|+++|+|++.... .. ++-.+|+.+++++ .||+|+++.+++
T Consensus 13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y 92 (411)
T KOG0599|consen 13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY 92 (411)
T ss_pred hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec
Confidence 45567788889999999999987654 478999999883211 11 4566799999998 699999999999
Q ss_pred ecCCceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecc
Q 001873 830 SNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADF 909 (1001)
Q Consensus 830 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Df 909 (1001)
..+...++|+|.|+.|.|.|++.. ...++++...+|++|+..|++|||.+ .|||||+||+|||++++.++||+||
T Consensus 93 es~sF~FlVFdl~prGELFDyLts--~VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDF 167 (411)
T KOG0599|consen 93 ESDAFVFLVFDLMPRGELFDYLTS--KVTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDF 167 (411)
T ss_pred cCcchhhhhhhhcccchHHHHhhh--heeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEecc
Confidence 999999999999999999999986 45689999999999999999999998 9999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCCCCCcccccccccCcccccc------CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 910 GLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM------QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 910 gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
|.|..+.+ .......+|||+|.|||.+.. ..|+..+|+||.|||||-++.|..||...
T Consensus 168 GFa~~l~~--------GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR 231 (411)
T KOG0599|consen 168 GFACQLEP--------GEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR 231 (411)
T ss_pred ceeeccCC--------chhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH
Confidence 99988753 334556799999999997743 56888999999999999999999999753
No 98
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=3.7e-32 Score=304.29 Aligned_cols=191 Identities=24% Similarity=0.324 Sum_probs=165.6
Q ss_pred CeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhcc-CCCceeeEEeeeecCCceEEEEEccCC
Q 001873 772 NVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPN 844 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~ 844 (1001)
+.||+|+||+||+|+.+ +++.||+|++.... ....+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999965 68899999986431 224577888888776 899999999999999999999999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCC
Q 001873 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924 (1001)
Q Consensus 845 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~ 924 (1001)
|+|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~----- 150 (329)
T cd05618 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG----- 150 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCC-----
Confidence 9999988764 4589999999999999999999998 99999999999999999999999999987532211
Q ss_pred CCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCC
Q 001873 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974 (1001)
Q Consensus 925 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~ 974 (1001)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||+.
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~ 198 (329)
T cd05618 151 --DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 198 (329)
T ss_pred --CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCcc
Confidence 122345799999999999999999999999999999999999999964
No 99
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2.9e-32 Score=304.44 Aligned_cols=193 Identities=23% Similarity=0.329 Sum_probs=166.7
Q ss_pred CeEeecCCeeEEEEEeC-CCCEEEEEEecCC-----CchhhHHHHHHHhhcc-CCCceeeEEeeeecCCceEEEEEccCC
Q 001873 772 NVIGTGSSGVVYRVTIP-NGETLAVKKMWSS-----DESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPN 844 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~ 844 (1001)
++||+|+||+||+|+.. +++.||||++... ...+.+..|.++++.+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999875 5789999998542 2234577888888866 799999999999999999999999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCC
Q 001873 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924 (1001)
Q Consensus 845 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~ 924 (1001)
|+|.+++.+. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~------ 149 (321)
T cd05591 81 GDLMFQIQRS--RKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILN------ 149 (321)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccC------
Confidence 9999998764 3478899999999999999999998 9999999999999999999999999998754221
Q ss_pred CCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 925 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
........||+.|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~ 200 (321)
T cd05591 150 -GVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADN 200 (321)
T ss_pred -CccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCC
Confidence 112234579999999999998899999999999999999999999998653
No 100
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.98 E-value=3.3e-32 Score=305.36 Aligned_cols=200 Identities=25% Similarity=0.298 Sum_probs=170.7
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC-----CchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS-----DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
++|++.++||+|+||+||+++.+ +++.||+|.+... .....+.+|+.++..++|++|+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 36888999999999999999976 5788999988432 22345788999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
||+++|+|.+++++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 81 ey~~~g~L~~~l~~~-~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~ 156 (332)
T cd05623 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 156 (332)
T ss_pred eccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheecccCC
Confidence 999999999999764 23578889999999999999999998 99999999999999999999999999987653221
Q ss_pred CCCCCCCCCCCcccccccccCccccc-----cCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHAS-----MQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
. .......||+.|+|||++. ...++.++|||||||++|||++|+.||...
T Consensus 157 ~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~ 211 (332)
T cd05623 157 T------VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE 211 (332)
T ss_pred c------ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC
Confidence 1 1122347999999999885 356789999999999999999999999754
No 101
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.98 E-value=4.3e-32 Score=324.78 Aligned_cols=207 Identities=25% Similarity=0.342 Sum_probs=174.2
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
++|++.++||+|+||.||+|+.. +++.||||++.... ..+++.+|++++++++||||+++++++.+.+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57899999999999999999875 58999999986432 1356889999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCC---------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEeccc
Q 001873 840 DYLPNGSLSSLLHGAG---------KGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFG 910 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~---------~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfg 910 (1001)
||++||+|.+++.... ....++..+.+++.||++|++|||+. +|+||||||+||+++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecC
Confidence 9999999999986421 12346677889999999999999998 99999999999999999999999999
Q ss_pred ccccccCCCCCC-----------CCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 911 LARIVSGSGDDN-----------CSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 911 la~~~~~~~~~~-----------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
+|+......... ..........+||+.|||||++.+..++.++||||+||++|||+||+.||...
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~ 234 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRK 234 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCc
Confidence 998762211100 00111223457999999999999999999999999999999999999999763
No 102
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.98 E-value=5e-32 Score=301.56 Aligned_cols=192 Identities=27% Similarity=0.361 Sum_probs=165.8
Q ss_pred CeEeecCCeeEEEEEeC-CCCEEEEEEecCC-----CchhhHHHHHHHhhcc-CCCceeeEEeeeecCCceEEEEEccCC
Q 001873 772 NVIGTGSSGVVYRVTIP-NGETLAVKKMWSS-----DESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPN 844 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~ 844 (1001)
++||+|+||+||+|+.+ +++.||||.+... ...+....|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999976 6889999998642 2335567788887654 899999999999999999999999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCC
Q 001873 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924 (1001)
Q Consensus 845 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~ 924 (1001)
|+|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 g~L~~~i~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~------ 149 (316)
T cd05620 81 GDLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG------ 149 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccC------
Confidence 9999999764 3478899999999999999999998 9999999999999999999999999998743211
Q ss_pred CCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 925 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
........||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~ 199 (316)
T cd05620 150 -DNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGD 199 (316)
T ss_pred -CCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCC
Confidence 12233457999999999999999999999999999999999999999754
No 103
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.98 E-value=4.7e-32 Score=302.74 Aligned_cols=197 Identities=23% Similarity=0.306 Sum_probs=169.3
Q ss_pred ccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC-----CchhhHHHHHHHhhccC-CCceeeEEeeeecCCceEEEEE
Q 001873 768 LTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS-----DESGAFSSEIQTLGSIR-HKNIVRLLGWGSNKNLKLLFYD 840 (1001)
Q Consensus 768 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~Ei~~l~~l~-h~nIv~l~~~~~~~~~~~lv~e 840 (1001)
|+..+.||+|+||+||+|+.. +++.||+|++... ...+.+..|..+++.+. |++|+++++++.+.+..++|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05615 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME 81 (323)
T ss_pred ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence 667789999999999999865 6899999988542 22345778888888885 5788889999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCC
Q 001873 841 YLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGD 920 (1001)
Q Consensus 841 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~ 920 (1001)
|+++|+|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||++++++.+||+|||+++......
T Consensus 82 y~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~- 155 (323)
T cd05615 82 YVNGGDLMYHIQQV--GKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG- 155 (323)
T ss_pred CCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCCCC-
Confidence 99999999999764 3489999999999999999999998 99999999999999999999999999987542211
Q ss_pred CCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 921 DNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 921 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus 156 ------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~ 205 (323)
T cd05615 156 ------VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGED 205 (323)
T ss_pred ------ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCC
Confidence 11233469999999999998899999999999999999999999998653
No 104
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.98 E-value=5.8e-32 Score=302.56 Aligned_cols=192 Identities=24% Similarity=0.322 Sum_probs=166.9
Q ss_pred CeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhcc-CCCceeeEEeeeecCCceEEEEEccCC
Q 001873 772 NVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPN 844 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~ 844 (1001)
+.||+|+||+||+|+.. +++.||||++.... ..+.+.+|+.++.++ +||+|+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999865 57899999986432 235578899998888 699999999999999999999999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCC
Q 001873 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924 (1001)
Q Consensus 845 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~ 924 (1001)
|+|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~------ 149 (327)
T cd05617 81 GDLMFHMQRQ--RKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP------ 149 (327)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCC------
Confidence 9999998754 3589999999999999999999998 9999999999999999999999999998753211
Q ss_pred CCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 925 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.......+||+.|+|||++.+..++.++||||+||++|||++|+.||+..
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~ 199 (327)
T cd05617 150 -GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDII 199 (327)
T ss_pred -CCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCcc
Confidence 11223457999999999999999999999999999999999999999753
No 105
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.98 E-value=6e-32 Score=300.75 Aligned_cols=192 Identities=24% Similarity=0.346 Sum_probs=165.1
Q ss_pred CeEeecCCeeEEEEEeC-CCCEEEEEEecCC-----CchhhHHHHHHHhhc-cCCCceeeEEeeeecCCceEEEEEccCC
Q 001873 772 NVIGTGSSGVVYRVTIP-NGETLAVKKMWSS-----DESGAFSSEIQTLGS-IRHKNIVRLLGWGSNKNLKLLFYDYLPN 844 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~Ei~~l~~-l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 844 (1001)
+.||+|+||+||+|+.. +++.||||++... ...+.+..|..+++. .+||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999975 5789999988543 233456678888776 4899999999999999999999999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCC
Q 001873 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924 (1001)
Q Consensus 845 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~ 924 (1001)
|+|.+++.+. ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~------ 149 (316)
T cd05619 81 GDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLG------ 149 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCC------
Confidence 9999999763 3478889999999999999999998 9999999999999999999999999998753211
Q ss_pred CCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 925 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
........||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~ 199 (316)
T cd05619 150 -DAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGH 199 (316)
T ss_pred -CCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCC
Confidence 11123456999999999999989999999999999999999999999764
No 106
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.98 E-value=5.3e-32 Score=302.61 Aligned_cols=192 Identities=28% Similarity=0.332 Sum_probs=164.0
Q ss_pred CeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHH-HhhccCCCceeeEEeeeecCCceEEEEEccCC
Q 001873 772 NVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQ-TLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPN 844 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~-~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 844 (1001)
+.||+|+||+||+|+.. +++.||||++.... ....+.+|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999975 68999999985421 2234455554 46789999999999999999999999999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCC
Q 001873 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924 (1001)
Q Consensus 845 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~ 924 (1001)
|+|.+++... ..+++..+..++.||+.|++|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~------ 149 (323)
T cd05575 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH------ 149 (323)
T ss_pred CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccC------
Confidence 9999999763 4578899999999999999999998 9999999999999999999999999998753211
Q ss_pred CCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 925 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~ 199 (323)
T cd05575 150 -SKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR 199 (323)
T ss_pred -CCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCC
Confidence 11223457999999999999999999999999999999999999999764
No 107
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.98 E-value=6.7e-33 Score=318.72 Aligned_cols=209 Identities=27% Similarity=0.367 Sum_probs=172.0
Q ss_pred hcccCCCeEeecCCeeEEEEEeCCC-CEEEEEEecCCCch--hhHHHHHHHhhccC-CCceeeEEee-ee---c---CCc
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIPNG-ETLAVKKMWSSDES--GAFSSEIQTLGSIR-HKNIVRLLGW-GS---N---KNL 834 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~~~-~~vavK~~~~~~~~--~~~~~Ei~~l~~l~-h~nIv~l~~~-~~---~---~~~ 834 (1001)
-++++.++|.+|||+.||.|+...+ .+||+|++...++. +...+||++|+.++ |+|||.+++. .. . .-+
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E 116 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE 116 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence 3577889999999999999997655 99999998766443 67889999999996 9999999993 21 1 236
Q ss_pred eEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEeccccccc
Q 001873 835 KLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARI 914 (1001)
Q Consensus 835 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~ 914 (1001)
+++.||||.||.|-|++.......+++.++++|+.|+++|+.+||. +.++|||||||-+|||++.+|+.||||||.|..
T Consensus 117 vllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt 195 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSADGNYKLCDFGSATT 195 (738)
T ss_pred EEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcCCCCEEeCccccccc
Confidence 6899999999999999987666679999999999999999999998 467899999999999999999999999999865
Q ss_pred ccCCCCC--CCCCCCCCCcccccccccCcccc---ccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 915 VSGSGDD--NCSKTNQRPQLAGSYGYMAPEHA---SMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 915 ~~~~~~~--~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
....... ........-...-|+-|+|||++ .+...++|+||||+||++|-++....||++.
T Consensus 196 ~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~s 261 (738)
T KOG1989|consen 196 KILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEES 261 (738)
T ss_pred ccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcC
Confidence 4322110 00000111122478999999976 6788999999999999999999999999876
No 108
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.98 E-value=8e-32 Score=296.68 Aligned_cols=199 Identities=24% Similarity=0.350 Sum_probs=168.0
Q ss_pred hcccCCCeEeecCCeeEEEEEeC--CCCEEEEEEecCCC----chhhHHHHHHHhhcc---CCCceeeEEeeee-----c
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP--NGETLAVKKMWSSD----ESGAFSSEIQTLGSI---RHKNIVRLLGWGS-----N 831 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l---~h~nIv~l~~~~~-----~ 831 (1001)
++|++.+.||+|+||+||+|+.. +++.||||++.... ....+.+|+.+++.+ +||||+++++++. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 36899999999999999999863 46889999885432 224566788777665 6999999999875 3
Q ss_pred CCceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccc
Q 001873 832 KNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGL 911 (1001)
Q Consensus 832 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgl 911 (1001)
....++||||++ ++|.+++.......+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Dfg~ 156 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL 156 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccccc
Confidence 456899999996 6999999876556689999999999999999999998 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 912 ARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 912 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
++..... .......||+.|+|||++....++.++||||+||++|||++|+.||....
T Consensus 157 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~ 213 (290)
T cd07862 157 ARIYSFQ--------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS 213 (290)
T ss_pred eEeccCC--------cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCC
Confidence 9865321 12234468999999999988899999999999999999999999998653
No 109
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.98 E-value=7.5e-32 Score=302.31 Aligned_cols=197 Identities=27% Similarity=0.418 Sum_probs=172.8
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
++|++.++||+|+||.||++++. ++..||+|.+..... ...+.+|++++++++||||+++++++.+++..++||||
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEec
Confidence 57899999999999999999976 688899998754322 25688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
+++|+|.++++.. ..+++..+..++.|++.|+.|||+.+ +|+||||||+||++++++.+||+|||++..+...
T Consensus 85 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~--- 157 (333)
T cd06650 85 MDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 157 (333)
T ss_pred CCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh---
Confidence 9999999999764 34788899999999999999999752 7999999999999999999999999998765321
Q ss_pred CCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 158 ------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 158 ------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred ------ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 112346899999999999888999999999999999999999999754
No 110
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.98 E-value=1.5e-32 Score=308.26 Aligned_cols=201 Identities=26% Similarity=0.306 Sum_probs=173.3
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
++|++.+.||+|+||+||+++.. +++.||+|++.... ..+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 36888999999999999999865 68999999986432 2356888999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
||+++|+|.+++.+. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++..+....
T Consensus 81 e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 156 (330)
T cd05601 81 EYQPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTANK 156 (330)
T ss_pred CCCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCCCC
Confidence 999999999999865 24588999999999999999999998 99999999999999999999999999998764321
Q ss_pred CCCCCCCCCCCcccccccccCccccc------cCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHAS------MQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
.. ......||+.|+|||++. ...++.++||||+||++|||++|+.||....
T Consensus 157 ~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~ 213 (330)
T cd05601 157 MV------NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGT 213 (330)
T ss_pred ce------eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCC
Confidence 11 122346899999999886 4567899999999999999999999997543
No 111
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.98 E-value=7.4e-32 Score=295.11 Aligned_cols=192 Identities=24% Similarity=0.289 Sum_probs=166.3
Q ss_pred EeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCCCCH
Q 001873 774 IGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSL 847 (1001)
Q Consensus 774 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 847 (1001)
||+|+||+||+++.. +++.||||++.... ..+.+..|++++++++||||+++.+++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999865 68999999985432 124567899999999999999999999999999999999999999
Q ss_pred HHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCCC
Q 001873 848 SSLLHGA--GKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSK 925 (1001)
Q Consensus 848 ~~~l~~~--~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~ 925 (1001)
.+++... ....+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.+..+....
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~------ 151 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ------ 151 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCC------
Confidence 9888542 234578999999999999999999998 99999999999999999999999999997654321
Q ss_pred CCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 926 TNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 926 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 152 -~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 200 (280)
T cd05608 152 -SKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRAR 200 (280)
T ss_pred -ccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence 1122346899999999999999999999999999999999999999764
No 112
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.98 E-value=7e-32 Score=301.45 Aligned_cols=192 Identities=27% Similarity=0.317 Sum_probs=163.2
Q ss_pred CeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHH-HhhccCCCceeeEEeeeecCCceEEEEEccCC
Q 001873 772 NVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQ-TLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPN 844 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~-~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 844 (1001)
++||+|+||+||+|+.. +++.||+|++.... ....+.+|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999975 68899999885422 2234555554 57889999999999999999999999999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCC
Q 001873 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924 (1001)
Q Consensus 845 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~ 924 (1001)
|+|.+++... ..+++..+..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~------ 149 (321)
T cd05603 81 GELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP------ 149 (321)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCC------
Confidence 9999988753 4478888889999999999999998 9999999999999999999999999998753211
Q ss_pred CCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 925 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
........||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 199 (321)
T cd05603 150 -EETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSR 199 (321)
T ss_pred -CCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCC
Confidence 11223457999999999999889999999999999999999999999764
No 113
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.98 E-value=7.6e-32 Score=307.52 Aligned_cols=193 Identities=23% Similarity=0.302 Sum_probs=168.4
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCC
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPN 844 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 844 (1001)
.+|++.+.||+|+||.||++... +++.||+|+.. .+.+.+|++++++++||||+++++++......++|+|++.
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~----~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~- 166 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ----RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK- 166 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh----hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-
Confidence 56999999999999999999864 68999999753 3457899999999999999999999999999999999995
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCC
Q 001873 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924 (1001)
Q Consensus 845 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~ 924 (1001)
++|..++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+|+......
T Consensus 167 ~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~----- 236 (391)
T PHA03212 167 TDLYCYLAAK--RNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN----- 236 (391)
T ss_pred CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccccccccc-----
Confidence 7899888764 3578999999999999999999998 99999999999999999999999999997532211
Q ss_pred CCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCC
Q 001873 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974 (1001)
Q Consensus 925 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~ 974 (1001)
........||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 237 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~ 285 (391)
T PHA03212 237 -ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFE 285 (391)
T ss_pred -ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCC
Confidence 1122345799999999999988999999999999999999999988754
No 114
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.98 E-value=1.1e-31 Score=314.99 Aligned_cols=202 Identities=24% Similarity=0.317 Sum_probs=173.1
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-C-CCEEEEEEecCCCch--hhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-N-GETLAVKKMWSSDES--GAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~-~~~vavK~~~~~~~~--~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
..|.+.+.||+|+||.||+|... + ++.||+|++...... ..+.+|+.+++.++|||||++++++...+..++||||
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~ 146 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEY 146 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEEC
Confidence 34889999999999999999754 3 678888876543322 4677899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 842 LPNGSLSSLLHGA--GKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 842 ~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
+++|+|.+++++. ....+++..+..++.|++.|++|+|+. +|+||||||+||+++.++.+||+|||+++.+....
T Consensus 147 ~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~ 223 (478)
T PTZ00267 147 GSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV 223 (478)
T ss_pred CCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCCcc
Confidence 9999999988642 233578889999999999999999998 99999999999999999999999999998764321
Q ss_pred CCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
. .......+||++|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 224 ~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~ 274 (478)
T PTZ00267 224 S-----LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGP 274 (478)
T ss_pred c-----cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC
Confidence 1 11233457999999999999999999999999999999999999999754
No 115
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.98 E-value=4.8e-32 Score=303.20 Aligned_cols=192 Identities=27% Similarity=0.329 Sum_probs=164.2
Q ss_pred CeEeecCCeeEEEEEeC-CCCEEEEEEecCC-----CchhhHHHHHH-HhhccCCCceeeEEeeeecCCceEEEEEccCC
Q 001873 772 NVIGTGSSGVVYRVTIP-NGETLAVKKMWSS-----DESGAFSSEIQ-TLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPN 844 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~Ei~-~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 844 (1001)
+.||+|+||+||+++.. +|+.||||++... .....+.+|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999865 6899999988543 22244555655 46778999999999999999999999999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCC
Q 001873 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924 (1001)
Q Consensus 845 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~ 924 (1001)
|+|..++... ..+++..+..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~------ 149 (325)
T cd05604 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ------ 149 (325)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCC------
Confidence 9999998753 4588999999999999999999998 9999999999999999999999999998753211
Q ss_pred CCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 925 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
........||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~ 199 (325)
T cd05604 150 -SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCR 199 (325)
T ss_pred -CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCC
Confidence 11223457999999999999999999999999999999999999999764
No 116
>PHA02988 hypothetical protein; Provisional
Probab=99.98 E-value=1.4e-31 Score=293.07 Aligned_cols=190 Identities=19% Similarity=0.318 Sum_probs=164.6
Q ss_pred CeEeecCCeeEEEEEeCCCCEEEEEEecCCCc-----hhhHHHHHHHhhccCCCceeeEEeeeec----CCceEEEEEcc
Q 001873 772 NVIGTGSSGVVYRVTIPNGETLAVKKMWSSDE-----SGAFSSEIQTLGSIRHKNIVRLLGWGSN----KNLKLLFYDYL 842 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~Ei~~l~~l~h~nIv~l~~~~~~----~~~~~lv~e~~ 842 (1001)
..||+|++|.||+|++ +|+.||||++..... .+.+.+|+.++++++||||+++++++.+ ....++||||+
T Consensus 26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~ 104 (283)
T PHA02988 26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC 104 (283)
T ss_pred eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence 5799999999999998 689999999865322 2567799999999999999999998866 34678999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCC
Q 001873 843 PNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922 (1001)
Q Consensus 843 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~ 922 (1001)
++|+|.+++++. ..+++....+++.|++.|+.|+|+.. +++||||||+||++++++.+||+|||+++.+...
T Consensus 105 ~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~---- 176 (283)
T PHA02988 105 TRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP---- 176 (283)
T ss_pred CCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhccc----
Confidence 999999999864 45889999999999999999999842 7889999999999999999999999999865321
Q ss_pred CCCCCCCCcccccccccCcccccc--CCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 923 CSKTNQRPQLAGSYGYMAPEHASM--QRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 923 ~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
.....|+..|+|||++.+ ..++.++|||||||++|||++|+.||+...
T Consensus 177 ------~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~ 226 (283)
T PHA02988 177 ------PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLT 226 (283)
T ss_pred ------cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCC
Confidence 112368899999999876 689999999999999999999999998654
No 117
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.98 E-value=8.2e-32 Score=301.36 Aligned_cols=192 Identities=28% Similarity=0.306 Sum_probs=162.7
Q ss_pred CeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHH-HhhccCCCceeeEEeeeecCCceEEEEEccCC
Q 001873 772 NVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQ-TLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPN 844 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~-~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 844 (1001)
+.||+|+||+||+|+.. +++.||+|++.... ....+.+|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999876 57889999985421 2234444444 46788999999999999999999999999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCC
Q 001873 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924 (1001)
Q Consensus 845 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~ 924 (1001)
|+|.+++... ..+++..+..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~L~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~------ 149 (325)
T cd05602 81 GELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH------ 149 (325)
T ss_pred CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccC------
Confidence 9999999763 3477888888999999999999998 9999999999999999999999999998754221
Q ss_pred CCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 925 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
........||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 199 (325)
T cd05602 150 -NGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR 199 (325)
T ss_pred -CCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCC
Confidence 11223457999999999999999999999999999999999999999754
No 118
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.98 E-value=1.1e-31 Score=297.57 Aligned_cols=202 Identities=26% Similarity=0.396 Sum_probs=168.7
Q ss_pred hcccCCCeEeecCCeeEEEEEeCC-----------------CCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIPN-----------------GETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRL 825 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~~-----------------~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l 825 (1001)
++|++.++||+|+||.||++.+++ +..||+|.+..... ..++.+|+.++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 578899999999999999997532 34699998865432 2578899999999999999999
Q ss_pred EeeeecCCceEEEEEccCCCCHHHHhhcCCC-----------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEE
Q 001873 826 LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGK-----------------GGADWEARYEVVLGVAHALAYLHHDCMPPILH 888 (1001)
Q Consensus 826 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-----------------~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH 888 (1001)
++++.+.+..++||||+++|+|.+++..... ..+++..+.+++.|++.|++|||+. +|+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Cccc
Confidence 9999999999999999999999999864311 2357788899999999999999998 9999
Q ss_pred eCCCCCCeEECCCCcEEEecccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-
Q 001873 889 GDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT- 967 (1001)
Q Consensus 889 ~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt- 967 (1001)
|||||+||+++.++.+||+|||+++.+...... .......++..|+|||++....++.++||||||+++|||++
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~ 236 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYY-----RIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILML 236 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCcee-----EecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHc
Confidence 999999999999999999999999865432111 11122346788999999988889999999999999999986
Q ss_pred -CCCCCCCC
Q 001873 968 -GRHPLDPT 975 (1001)
Q Consensus 968 -g~~Pf~~~ 975 (1001)
+..||...
T Consensus 237 ~~~~p~~~~ 245 (304)
T cd05096 237 CKEQPYGEL 245 (304)
T ss_pred cCCCCCCcC
Confidence 56788754
No 119
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.98 E-value=9.4e-32 Score=303.14 Aligned_cols=199 Identities=25% Similarity=0.372 Sum_probs=167.2
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC----CchhhHHHHHHHhhccCCCceeeEEeeeecC-----CceE
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS----DESGAFSSEIQTLGSIRHKNIVRLLGWGSNK-----NLKL 836 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~-----~~~~ 836 (1001)
+|++.+.||+|+||.||+|+.. +++.||||++... ....++.+|++++++++||||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 5788899999999999999865 6899999988532 2235688999999999999999999987533 2479
Q ss_pred EEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEeccccccccc
Q 001873 837 LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVS 916 (1001)
Q Consensus 837 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~ 916 (1001)
+||||+. ++|.+++.+. ..+++..+..++.|+++|+.|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 81 lv~e~~~-~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~ 154 (338)
T cd07859 81 VVFELME-SDLHQVIKAN--DDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARVAF 154 (338)
T ss_pred EEEecCC-CCHHHHHHhc--ccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccccccc
Confidence 9999995 7999998764 3489999999999999999999998 99999999999999999999999999998643
Q ss_pred CCCCCCCCCCCCCCcccccccccCcccccc--CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 917 GSGDDNCSKTNQRPQLAGSYGYMAPEHASM--QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 917 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
..... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.
T Consensus 155 ~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~ 211 (338)
T cd07859 155 NDTPT----AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGK 211 (338)
T ss_pred cccCc----cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCC
Confidence 22111 112234579999999999865 67899999999999999999999999754
No 120
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.97 E-value=9.6e-32 Score=305.79 Aligned_cols=203 Identities=32% Similarity=0.412 Sum_probs=169.9
Q ss_pred hcccCCCeEeecCCeeEEEEEeC------CCCEEEEEEecCCCc---hhhHHHHHHHhhcc-CCCceeeEEeeeecCCce
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP------NGETLAVKKMWSSDE---SGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLK 835 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~~~~ 835 (1001)
++|++.+.||+|+||.||+|++. +++.||||++..... .+.+.+|+.+++.+ +||||+++++++...+..
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~ 117 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPV 117 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCe
Confidence 47889999999999999998742 345899999865432 35688999999999 899999999999999999
Q ss_pred EEEEEccCCCCHHHHhhcCC------------------------------------------------------------
Q 001873 836 LLFYDYLPNGSLSSLLHGAG------------------------------------------------------------ 855 (1001)
Q Consensus 836 ~lv~e~~~~gsL~~~l~~~~------------------------------------------------------------ 855 (1001)
++||||+++|+|.++++...
T Consensus 118 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (374)
T cd05106 118 LVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDS 197 (374)
T ss_pred EEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccc
Confidence 99999999999999986421
Q ss_pred --------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCCCCC
Q 001873 856 --------KGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927 (1001)
Q Consensus 856 --------~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~~~ 927 (1001)
...+++..+.+++.||+.|++|||++ +|+||||||+||++++++++||+|||+++.+...... .
T Consensus 198 ~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~-----~ 269 (374)
T cd05106 198 KDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNY-----V 269 (374)
T ss_pred cchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcce-----e
Confidence 12367788899999999999999998 9999999999999999999999999999865432111 1
Q ss_pred CCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 928 QRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 928 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
......++..|||||++....++.++|||||||++|||++ |+.||....
T Consensus 270 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~ 319 (374)
T cd05106 270 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGIL 319 (374)
T ss_pred eccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccc
Confidence 1112235678999999988899999999999999999997 999997653
No 121
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.97 E-value=1.1e-31 Score=303.89 Aligned_cols=193 Identities=28% Similarity=0.476 Sum_probs=163.7
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
++|+..+.||+|+||+||+|+.. +++.||||++..... .+.+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 45677889999999999999865 689999999865432 35788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
+++|+|.+.. ..++..+..++.||+.|++|||+. +|+||||||+||++++++.+||+|||+++.+....
T Consensus 154 ~~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~-- 222 (353)
T PLN00034 154 MDGGSLEGTH------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM-- 222 (353)
T ss_pred CCCCcccccc------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceeccccc--
Confidence 9999986542 245677888999999999999998 99999999999999999999999999998754221
Q ss_pred CCCCCCCCCcccccccccCcccccc-----CCCCCccchHHHHHHHHHHHhCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASM-----QRITEKSDVYSFGVVLLEVLTGRHPLDP 974 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~SlG~il~elltg~~Pf~~ 974 (1001)
.......||..|+|||++.. ...+.++|||||||++|||++|+.||..
T Consensus 223 -----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~ 275 (353)
T PLN00034 223 -----DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGV 275 (353)
T ss_pred -----ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCC
Confidence 11223479999999998743 2345689999999999999999999984
No 122
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.97 E-value=2.2e-31 Score=290.90 Aligned_cols=191 Identities=26% Similarity=0.327 Sum_probs=166.6
Q ss_pred EeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCCCCH
Q 001873 774 IGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSL 847 (1001)
Q Consensus 774 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 847 (1001)
||+|+||+||+++.+ +|+.||+|++.... ..+.+..|++++++++||||+++++++.++...++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999865 68999999885321 224556799999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCCCCC
Q 001873 848 SSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927 (1001)
Q Consensus 848 ~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~~~ 927 (1001)
.+++........++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~-------- 149 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK-------- 149 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc--------
Confidence 9998766556688999999999999999999998 99999999999999999999999999987653221
Q ss_pred CCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 928 QRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 928 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
......|++.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 150 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~ 197 (277)
T cd05607 150 TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDH 197 (277)
T ss_pred eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCC
Confidence 112346899999999998888999999999999999999999999754
No 123
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.97 E-value=3.9e-32 Score=303.04 Aligned_cols=192 Identities=29% Similarity=0.354 Sum_probs=167.6
Q ss_pred CeEeecCCeeEEEEEe----CCCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccC
Q 001873 772 NVIGTGSSGVVYRVTI----PNGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLP 843 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~ 843 (1001)
+.||+|+||+||+++. .+++.||+|++.... ....+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999874 358999999986432 23457789999999999999999999999999999999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCC
Q 001873 844 NGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNC 923 (1001)
Q Consensus 844 ~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~ 923 (1001)
+|+|.+++.+. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~---- 152 (318)
T cd05582 82 GGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE---- 152 (318)
T ss_pred CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC----
Confidence 99999999753 3589999999999999999999998 99999999999999999999999999987643211
Q ss_pred CCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 924 SKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 924 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.......||+.|+|||++....++.++|||||||++|||++|+.||...
T Consensus 153 ---~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~ 201 (318)
T cd05582 153 ---KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGK 201 (318)
T ss_pred ---CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCC
Confidence 1123357999999999999888999999999999999999999999764
No 124
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.97 E-value=1.6e-31 Score=297.82 Aligned_cols=192 Identities=26% Similarity=0.359 Sum_probs=166.5
Q ss_pred CeEeecCCeeEEEEEeC-CCCEEEEEEecCC-----CchhhHHHHHHHhhcc-CCCceeeEEeeeecCCceEEEEEccCC
Q 001873 772 NVIGTGSSGVVYRVTIP-NGETLAVKKMWSS-----DESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPN 844 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~ 844 (1001)
+.||+|+||+||+|+.. +++.||||++... .....+.+|+++++.+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999875 5789999988642 2335677898998887 799999999999999999999999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCC
Q 001873 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924 (1001)
Q Consensus 845 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~ 924 (1001)
|+|.+++.+. ..+++..+..++.|++.|+.|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~------ 149 (318)
T cd05570 81 GDLMFHIQRS--GRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG------ 149 (318)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcC------
Confidence 9999998764 3589999999999999999999998 9999999999999999999999999998753211
Q ss_pred CCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 925 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.......+||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 150 -~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~ 199 (318)
T cd05570 150 -GVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGD 199 (318)
T ss_pred -CCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCC
Confidence 11122346899999999999999999999999999999999999999754
No 125
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.97 E-value=1.6e-31 Score=303.50 Aligned_cols=208 Identities=24% Similarity=0.328 Sum_probs=172.9
Q ss_pred HHHhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC----CchhhHHHHHHHhhccCCCceeeEEeeeecCC----
Q 001873 763 DVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS----DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKN---- 833 (1001)
Q Consensus 763 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~---- 833 (1001)
.+.++|++.+.||+|+||.||+++.. +++.||||++... .....+.+|+.+++.++||||+++++++...+
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 46789999999999999999999865 6899999998543 22356789999999999999999999876443
Q ss_pred --ceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccc
Q 001873 834 --LKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGL 911 (1001)
Q Consensus 834 --~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgl 911 (1001)
..++||||++ +++.+.++. .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 98 ~~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg~ 169 (359)
T cd07876 98 FQDVYLVMELMD-ANLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 169 (359)
T ss_pred cceeEEEEeCCC-cCHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCCC
Confidence 4689999997 467776643 378888899999999999999998 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcCcccchhhhh
Q 001873 912 ARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMF 990 (1001)
Q Consensus 912 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~~~~~l~~~~~~~~ 990 (1001)
++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.. ...+|.....
T Consensus 170 a~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~----~~~~~~~~~~ 236 (359)
T cd07876 170 ARTACTN--------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTD----HIDQWNKVIE 236 (359)
T ss_pred ccccccC--------ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHH
Confidence 9754221 12234578999999999999999999999999999999999999998642 3344544443
No 126
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.97 E-value=1.6e-31 Score=290.21 Aligned_cols=201 Identities=24% Similarity=0.369 Sum_probs=170.6
Q ss_pred hcccCCCeEeecCCeeEEEEEeC----CCCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP----NGETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLF 838 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv 838 (1001)
++|++.+.||+|+||.||+|.+. .+..||+|.+..... ...+.+|+.++++++||||+++++++..++..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 46888999999999999999753 467899999876532 25688999999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCC
Q 001873 839 YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGS 918 (1001)
Q Consensus 839 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~ 918 (1001)
|||+++|+|.+++... ...+++..++.++.|++.|++|||++ +++||||||+||+++.++.+|++|||.+......
T Consensus 85 ~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~ 160 (266)
T cd05064 85 TEYMSNGALDSFLRKH-EGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSE 160 (266)
T ss_pred EEeCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCccccccccc
Confidence 9999999999999764 23578999999999999999999998 9999999999999999999999999987653211
Q ss_pred CCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 919 GDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 919 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
. ........++..|+|||.+.+..++.++|||||||++||+++ |+.||....
T Consensus 161 ~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~ 213 (266)
T cd05064 161 A------IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMS 213 (266)
T ss_pred c------hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCC
Confidence 1 011112245678999999998999999999999999999875 999997653
No 127
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.4e-32 Score=288.31 Aligned_cols=202 Identities=23% Similarity=0.337 Sum_probs=178.6
Q ss_pred HHHhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEE
Q 001873 763 DVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLL 837 (1001)
Q Consensus 763 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~l 837 (1001)
.+..-|...+.||+|.|+.|-++++- +|+.||||++.+.. ....+.+|++.|+.++|||||++|++...+...|+
T Consensus 15 kIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyL 94 (864)
T KOG4717|consen 15 KIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYL 94 (864)
T ss_pred ceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEE
Confidence 34566888899999999999999854 79999999985432 23678899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEE-CCCCcEEEeccccccccc
Q 001873 838 FYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLL-GPGYQAYLADFGLARIVS 916 (1001)
Q Consensus 838 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll-~~~~~~ki~Dfgla~~~~ 916 (1001)
|+|.=++|+|+|||-++ +..+.+..+.+++.||+.|+.|+|+- ++|||||||+||.+ ..-|-+|++|||++..+.
T Consensus 95 iLELGD~GDl~DyImKH-e~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~ 170 (864)
T KOG4717|consen 95 ILELGDGGDLFDYIMKH-EEGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ 170 (864)
T ss_pred EEEecCCchHHHHHHhh-hccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCC
Confidence 99999999999999877 45689999999999999999999997 89999999999876 567899999999987664
Q ss_pred CCCCCCCCCCCCCCcccccccccCccccccCCCC-CccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 917 GSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRIT-EKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 917 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
+ .....+.+|+..|-|||++.+..|+ +++||||+|||+|.+.+|+.||+...
T Consensus 171 P--------G~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAN 223 (864)
T KOG4717|consen 171 P--------GKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAN 223 (864)
T ss_pred C--------cchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCcccccc
Confidence 3 3445667999999999999999997 68999999999999999999998764
No 128
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.97 E-value=1.8e-31 Score=303.82 Aligned_cols=204 Identities=29% Similarity=0.385 Sum_probs=170.6
Q ss_pred HhcccCCCeEeecCCeeEEEEEe------CCCCEEEEEEecCCC---chhhHHHHHHHhhcc-CCCceeeEEeeeecCCc
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTI------PNGETLAVKKMWSSD---ESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNL 834 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~~~~~~---~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~~~ 834 (1001)
.++|++.+.||+|+||.||+|++ .++..||||++.... ..+.+.+|+++++.+ +||||+++++++.+.+.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 34688999999999999999863 235689999986433 235688999999999 89999999999999999
Q ss_pred eEEEEEccCCCCHHHHhhcCC-----------------------------------------------------------
Q 001873 835 KLLFYDYLPNGSLSSLLHGAG----------------------------------------------------------- 855 (1001)
Q Consensus 835 ~~lv~e~~~~gsL~~~l~~~~----------------------------------------------------------- 855 (1001)
.++||||+++|+|.+++++..
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 999999999999999986532
Q ss_pred --------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 856 --------------KGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 856 --------------~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
...+++..+.+++.||+.|++|||+. +|+||||||+||+++.++.+||+|||+++.+......
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 12367888899999999999999998 9999999999999999999999999999876432211
Q ss_pred CCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
.......++..|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 271 -----~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~ 321 (375)
T cd05104 271 -----VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMP 321 (375)
T ss_pred -----cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCC
Confidence 11112235678999999999999999999999999999998 899997653
No 129
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.97 E-value=1.7e-32 Score=275.60 Aligned_cols=227 Identities=21% Similarity=0.239 Sum_probs=185.7
Q ss_pred HHhcccCCCeEeecCCeeEEEEEeC---C--CCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeec-CC
Q 001873 764 VVRNLTSANVIGTGSSGVVYRVTIP---N--GETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSN-KN 833 (1001)
Q Consensus 764 ~~~~~~~~~~lG~G~fg~Vy~~~~~---~--~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~-~~ 833 (1001)
....|+.+..||+|.||.||+|..+ + ...+|+|+++.+. .+....||+..++.++||||+.+..++.. +.
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 4567999999999999999998532 2 3479999997763 34567899999999999999999998766 78
Q ss_pred ceEEEEEccCCCCHHHHhhcC---CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCC----CcEEE
Q 001873 834 LKLLFYDYLPNGSLSSLLHGA---GKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPG----YQAYL 906 (1001)
Q Consensus 834 ~~~lv~e~~~~gsL~~~l~~~---~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~----~~~ki 906 (1001)
..++++||.+ -+|.+.|+-+ ..+.++...+..|..||+.|+.|||++ -|+||||||.|||+..+ |.|||
T Consensus 102 ~v~l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 102 KVWLLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred eEEEEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEe
Confidence 8999999998 5899888643 234578889999999999999999999 89999999999999766 89999
Q ss_pred ecccccccccCCCCCCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCC-----c
Q 001873 907 ADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGG-----A 980 (1001)
Q Consensus 907 ~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~~~-----~ 980 (1001)
+|+|+|+.+...-.+. .....++-|.+|+|||.+.+ +.|+.+.||||.|||+.||+|-++-|.+....- -
T Consensus 178 aDlGlaR~~~~plkpl----~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pf 253 (438)
T KOG0666|consen 178 ADLGLARLFNNPLKPL----ASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPF 253 (438)
T ss_pred ecccHHHHhhcccccc----ccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCc
Confidence 9999999986553322 23345678999999998765 778999999999999999999998887654321 2
Q ss_pred Ccccchhhhhcccchhhh
Q 001873 981 PLVQWTPLMFLMLNLEAE 998 (1001)
Q Consensus 981 ~l~~~~~~~~~~~~~~~~ 998 (1001)
+.+|..+++.++|-+.++
T Consensus 254 q~dQl~rIf~vLG~Pt~~ 271 (438)
T KOG0666|consen 254 QHDQLDRIFEVLGTPTDK 271 (438)
T ss_pred hHHHHHHHHHHcCCCccc
Confidence 556777888888755443
No 130
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.97 E-value=3.1e-31 Score=290.89 Aligned_cols=198 Identities=25% Similarity=0.330 Sum_probs=172.5
Q ss_pred ccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 768 LTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 768 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
|+..+.||+|+||+||++... +++.||||++.... ....+.+|+.++++++|++|+++++.+.+.+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 667788999999999999865 68999999875432 124577899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
+++++|.+++...+...+++..+..++.|++.|+.|||+. +|+||||||+||++++++.++|+|||++.......
T Consensus 82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 156 (285)
T cd05630 82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-- 156 (285)
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc--
Confidence 9999999999765556689999999999999999999998 99999999999999999999999999987643211
Q ss_pred CCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
......|++.|+|||++....++.++||||+|+++|||++|+.||....
T Consensus 157 ------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~ 205 (285)
T cd05630 157 ------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 205 (285)
T ss_pred ------cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCC
Confidence 1123468999999999998899999999999999999999999998643
No 131
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.97 E-value=2e-31 Score=288.73 Aligned_cols=202 Identities=27% Similarity=0.432 Sum_probs=176.0
Q ss_pred HhcccCCCeEeecCCeeEEEEEeCCCCEEEEEEecCCC-chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccC
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSD-ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLP 843 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~ 843 (1001)
.++|++.++||+|+||.||+|...++..||+|++.... ..+.+.+|+.++++++|+||+++++++.+.+..++||||++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA 84 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC
Confidence 35788999999999999999998888899999876533 34688999999999999999999999999999999999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCC
Q 001873 844 NGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNC 923 (1001)
Q Consensus 844 ~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~ 923 (1001)
+++|.+++++......++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||+++.......
T Consensus 85 ~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~--- 158 (261)
T cd05072 85 KGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY--- 158 (261)
T ss_pred CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCCce---
Confidence 99999999876556688999999999999999999998 999999999999999999999999999987532211
Q ss_pred CCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 924 SKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 924 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
.......++..|+|||+.....++.++|||||||++|||+| |+.||...
T Consensus 159 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~ 208 (261)
T cd05072 159 ---TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGM 208 (261)
T ss_pred ---eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCC
Confidence 11122345678999999988889999999999999999998 99999754
No 132
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.97 E-value=3.3e-31 Score=286.08 Aligned_cols=201 Identities=24% Similarity=0.382 Sum_probs=173.5
Q ss_pred hcccCCCeEeecCCeeEEEEEeCCCCEEEEEEecCCC-chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCC
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSD-ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPN 844 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 844 (1001)
++|++.+.||+|+||.||+++++++..+|+|.+.... ..+++.+|+.++++++||||+++++++.+.+..++||||+++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~ 83 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMEN 83 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCC
Confidence 4578889999999999999999888899999876433 346889999999999999999999999999999999999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCC
Q 001873 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924 (1001)
Q Consensus 845 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~ 924 (1001)
|+|.+++++.. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++.......
T Consensus 84 ~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~---- 155 (256)
T cd05114 84 GCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY---- 155 (256)
T ss_pred CcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCce----
Confidence 99999997542 3578999999999999999999998 999999999999999999999999999886532211
Q ss_pred CCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 925 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
.......++..|+|||++.+..++.++||||||+++|||++ |+.||....
T Consensus 156 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~ 206 (256)
T cd05114 156 --TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKS 206 (256)
T ss_pred --eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCC
Confidence 11112235668999999988889999999999999999999 999997653
No 133
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=2.6e-32 Score=300.57 Aligned_cols=192 Identities=27% Similarity=0.429 Sum_probs=165.5
Q ss_pred CCCeEeecCCeeEEEEEeC-CCCEEE---EE---EecCCCchhhHHHHHHHhhccCCCceeeEEeeeecCCc--eEEEEE
Q 001873 770 SANVIGTGSSGVVYRVTIP-NGETLA---VK---KMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNL--KLLFYD 840 (1001)
Q Consensus 770 ~~~~lG~G~fg~Vy~~~~~-~~~~va---vK---~~~~~~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~--~~lv~e 840 (1001)
...+||+|+|-+||+|-+. +|-.|| || ..+++...++|..|+.+++.++||||++++.+|.+... ..+|+|
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE 123 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE 123 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence 3457999999999999864 466666 33 22444555889999999999999999999998876554 678999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEEC-CCCcEEEecccccccccCCC
Q 001873 841 YLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLG-PGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 841 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~-~~~~~ki~Dfgla~~~~~~~ 919 (1001)
.|..|+|..|+++.+. ++....+.|++||++||.|||++ .|+|||||||-+||||+ ..|.|||+|.|+|+....
T Consensus 124 L~TSGtLr~Y~kk~~~--vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~-- 198 (632)
T KOG0584|consen 124 LFTSGTLREYRKKHRR--VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK-- 198 (632)
T ss_pred cccCCcHHHHHHHhcc--CCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhc--
Confidence 9999999999998654 88899999999999999999996 58999999999999997 568999999999998632
Q ss_pred CCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCC
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~ 974 (1001)
.....++|||.|||||+.. ..|++.+||||||++|.||.|+..||..
T Consensus 199 -------s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsE 245 (632)
T KOG0584|consen 199 -------SHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSE 245 (632)
T ss_pred -------cccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhh
Confidence 2334478999999999998 7899999999999999999999999864
No 134
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.97 E-value=1.9e-31 Score=312.76 Aligned_cols=204 Identities=24% Similarity=0.340 Sum_probs=172.6
Q ss_pred HHhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecCC-----
Q 001873 764 VVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKN----- 833 (1001)
Q Consensus 764 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~----- 833 (1001)
..++|++.+.||+|+||+||+++.. +++.||||++.... ....+.+|+..+..++|+||+++.+.+...+
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 3468999999999999999999854 68999999985432 2356788999999999999999988664322
Q ss_pred ---ceEEEEEccCCCCHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEec
Q 001873 834 ---LKLLFYDYLPNGSLSSLLHGAG--KGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLAD 908 (1001)
Q Consensus 834 ---~~~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~D 908 (1001)
..++||||+++|+|.++++... ...+++..+..++.|++.||+|+|+. +|+||||||+||+++.++.+||+|
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~D 186 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLGD 186 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEEe
Confidence 3679999999999999997532 34578899999999999999999998 999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 909 FGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 909 fgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
||+++.+..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 187 FGls~~~~~~~~-----~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~ 248 (496)
T PTZ00283 187 FGFSKMYAATVS-----DDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGE 248 (496)
T ss_pred cccCeecccccc-----ccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 999987643211 11223457999999999999999999999999999999999999999764
No 135
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.97 E-value=4.1e-31 Score=290.05 Aligned_cols=197 Identities=24% Similarity=0.323 Sum_probs=172.2
Q ss_pred ccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 768 LTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 768 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
|+..+.||+|+||+||+|+.. +++.||+|.+.... ....+.+|++++++++|++|+++.+++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 667788999999999999865 68999999885432 124577899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
+++++|.+++...+...+++..+..++.|++.|+.|||+. +|+||||||+||++++++.+||+|||++......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~--- 155 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG--- 155 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCC---
Confidence 9999999998765555689999999999999999999998 9999999999999999999999999998764321
Q ss_pred CCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.......|++.|+|||++.+..++.++|+||+|+++|||++|+.||...
T Consensus 156 -----~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~ 204 (285)
T cd05632 156 -----ESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGR 204 (285)
T ss_pred -----CcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCC
Confidence 1112346899999999998889999999999999999999999999864
No 136
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=2.5e-32 Score=290.87 Aligned_cols=201 Identities=28% Similarity=0.400 Sum_probs=174.5
Q ss_pred CCeEeecCCeeEEEEEeC-CCCEEEEEEecC----CCchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCCC
Q 001873 771 ANVIGTGSSGVVYRVTIP-NGETLAVKKMWS----SDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNG 845 (1001)
Q Consensus 771 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~----~~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 845 (1001)
.++||+|.||+||-|+++ +|+.||||.+.+ .....++++|+.+++.++||.||.+-..|+..+..++|||-+.|.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 578999999999999865 799999998854 334478999999999999999999999999999999999999755
Q ss_pred CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECC---CCcEEEecccccccccCCCCCC
Q 001873 846 SLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGP---GYQAYLADFGLARIVSGSGDDN 922 (1001)
Q Consensus 846 sL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~---~~~~ki~Dfgla~~~~~~~~~~ 922 (1001)
-|+-++.. ....+++....-++.||+.|++|||.+ +|+|+||||+|||+.+ .-++||||||.|+++.
T Consensus 649 MLEMILSs-EkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIg------ 718 (888)
T KOG4236|consen 649 MLEMILSS-EKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIG------ 718 (888)
T ss_pred HHHHHHHh-hcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecc------
Confidence 55555543 456688888888899999999999998 9999999999999964 3489999999999874
Q ss_pred CCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcCcc
Q 001873 923 CSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLV 983 (1001)
Q Consensus 923 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~~~~~l~ 983 (1001)
....+..++|||.|.|||++..+.|+..-|+||+|||+|--++|..||..+..-.++++
T Consensus 719 --EksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQ 777 (888)
T KOG4236|consen 719 --EKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQ 777 (888)
T ss_pred --hhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhh
Confidence 34567788999999999999999999999999999999999999999998765555443
No 137
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.6e-32 Score=276.77 Aligned_cols=198 Identities=23% Similarity=0.277 Sum_probs=174.3
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
++|...++||+|.||+|.+++-+ .++.||+|+++++. +...-..|-++++..+||.+..+.-.|...+..|+||
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM 247 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM 247 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence 56777889999999999998865 68999999886643 2244567999999999999999988899999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
||..||.|.-++.+ .+.+++...+-+...|+.|+.|||++ +||+||+|.+|.++|.+|++||+|||+++.--
T Consensus 248 eyanGGeLf~HLsr--er~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I--- 319 (516)
T KOG0690|consen 248 EYANGGELFFHLSR--ERVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEEI--- 319 (516)
T ss_pred EEccCceEeeehhh--hhcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhcc---
Confidence 99999999998876 45578888888889999999999998 99999999999999999999999999998532
Q ss_pred CCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.......+.+|||.|.|||++....|+.++|-|.+||+||||++|+.||...
T Consensus 320 ----~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~ 371 (516)
T KOG0690|consen 320 ----KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNK 371 (516)
T ss_pred ----cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCccccc
Confidence 2334456789999999999999999999999999999999999999999753
No 138
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-32 Score=268.05 Aligned_cols=216 Identities=24% Similarity=0.347 Sum_probs=174.3
Q ss_pred hcccCCCeEeecCCeeEEEEE-eCCCCEEEEEEecCC--CchhhHHHHHHHhhccCCCceeeEEeeeec-----CCceEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVT-IPNGETLAVKKMWSS--DESGAFSSEIQTLGSIRHKNIVRLLGWGSN-----KNLKLL 837 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~-----~~~~~l 837 (1001)
++|++.+.+|+|||+-||.++ ..+++.||+|++.-. ++.+...+|++..++++||||++++++... ....|+
T Consensus 21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yl 100 (302)
T KOG2345|consen 21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYL 100 (302)
T ss_pred ceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEE
Confidence 689999999999999999998 557899999998543 345778899999999999999999987543 335899
Q ss_pred EEEccCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccc
Q 001873 838 FYDYLPNGSLSSLLHGA--GKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIV 915 (1001)
Q Consensus 838 v~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~ 915 (1001)
+++|+..|+|.+.+... +...+++.++++|+.++++|+++||+. .++++||||||.||++.+.+.+++.|||.+...
T Consensus 101 l~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a 179 (302)
T KOG2345|consen 101 LLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSATQA 179 (302)
T ss_pred EeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCcccc
Confidence 99999999999998764 334589999999999999999999996 346999999999999999999999999998765
Q ss_pred cCCCCCC--CCCCCCCCcccccccccCccccc---cCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcCc
Q 001873 916 SGSGDDN--CSKTNQRPQLAGSYGYMAPEHAS---MQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPL 982 (1001)
Q Consensus 916 ~~~~~~~--~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~~~~~l 982 (1001)
.-.-... ....+....-..|..|+|||.+. +...++++|||||||++|+|+.|..||+.....++.+
T Consensus 180 ~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSl 251 (302)
T KOG2345|consen 180 PIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSL 251 (302)
T ss_pred ceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeE
Confidence 3221110 00001111223678899999874 4566899999999999999999999999766544433
No 139
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.97 E-value=3.2e-31 Score=307.32 Aligned_cols=197 Identities=24% Similarity=0.335 Sum_probs=162.8
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCchhhHHHHHHHhhccCCCceeeEEeeeecC--------CceE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNK--------NLKL 836 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~--------~~~~ 836 (1001)
++|++.++||+|+||+||+|... +++.||||++.... ....+|+.+++.++||||+++++++... ...+
T Consensus 66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~--~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~ 143 (440)
T PTZ00036 66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP--QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLN 143 (440)
T ss_pred CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc--chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEE
Confidence 57999999999999999999865 68999999885432 3456799999999999999998876321 2467
Q ss_pred EEEEccCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCC-cEEEecccccc
Q 001873 837 LFYDYLPNGSLSSLLHGA--GKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGY-QAYLADFGLAR 913 (1001)
Q Consensus 837 lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~-~~ki~Dfgla~ 913 (1001)
+||||++ +++.+++... ....+++..+..++.||+.||+|||+. +|+||||||+||+++.++ .+||+|||+|+
T Consensus 144 lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DFGla~ 219 (440)
T PTZ00036 144 VVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDFGSAK 219 (440)
T ss_pred EEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeeccccch
Confidence 8999997 5787776532 234578999999999999999999998 999999999999999664 79999999998
Q ss_pred cccCCCCCCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 914 IVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
.+... .......||+.|+|||++.+ ..|+.++||||+||++|||++|+.||.+..
T Consensus 220 ~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~ 275 (440)
T PTZ00036 220 NLLAG--------QRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQS 275 (440)
T ss_pred hccCC--------CCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 76422 11223478999999998765 478999999999999999999999997653
No 140
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.97 E-value=4.5e-31 Score=301.27 Aligned_cols=204 Identities=27% Similarity=0.366 Sum_probs=170.9
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC------CCCEEEEEEecCCCc---hhhHHHHHHHhhccC-CCceeeEEeeeecCCc
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP------NGETLAVKKMWSSDE---SGAFSSEIQTLGSIR-HKNIVRLLGWGSNKNL 834 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~-h~nIv~l~~~~~~~~~ 834 (1001)
.++|++.++||+|+||.||+|+.. .+..||||++..... .+.+.+|++++++++ ||||+++++++.+.+.
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~ 115 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP 115 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence 457889999999999999999753 234799999864332 357889999999996 9999999999999999
Q ss_pred eEEEEEccCCCCHHHHhhcCC-----------------------------------------------------------
Q 001873 835 KLLFYDYLPNGSLSSLLHGAG----------------------------------------------------------- 855 (1001)
Q Consensus 835 ~~lv~e~~~~gsL~~~l~~~~----------------------------------------------------------- 855 (1001)
.++||||+++|+|.+++++..
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 999999999999999986531
Q ss_pred -----------------------------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECC
Q 001873 856 -----------------------------------KGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGP 900 (1001)
Q Consensus 856 -----------------------------------~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~ 900 (1001)
...+++..+.+++.|++.|++|||+. +|+||||||+||+++.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill~~ 272 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEEeC
Confidence 12367778889999999999999998 9999999999999999
Q ss_pred CCcEEEecccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 901 GYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 901 ~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
++.+||+|||+++....... ........+++.|+|||.+.+..++.++|||||||++|||++ |+.||....
T Consensus 273 ~~~~kL~DfGla~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~ 344 (400)
T cd05105 273 GKIVKICDFGLARDIMHDSN-----YVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMI 344 (400)
T ss_pred CCEEEEEeCCcceecccccc-----ccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccc
Confidence 99999999999986533211 111223357788999999988899999999999999999997 999997653
No 141
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.97 E-value=5.3e-31 Score=284.37 Aligned_cols=201 Identities=26% Similarity=0.381 Sum_probs=173.4
Q ss_pred hcccCCCeEeecCCeeEEEEEeCCCCEEEEEEecCCC-chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCC
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSD-ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPN 844 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 844 (1001)
++|++.+.||+|+||+||+|+..++..||||.+.... ..+.+.+|+.++++++||||+++++++.+....++||||+++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSN 83 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCC
Confidence 4688889999999999999998777789999886543 246789999999999999999999999988899999999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCC
Q 001873 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924 (1001)
Q Consensus 845 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~ 924 (1001)
|+|.+++..... .+++..+++++.|++.|++|||+. +++|+||||+||+++.++.+||+|||.++.......
T Consensus 84 ~~l~~~i~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~---- 155 (256)
T cd05113 84 GCLLNYLREHGK-RFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY---- 155 (256)
T ss_pred CcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCce----
Confidence 999999976433 579999999999999999999998 999999999999999999999999999886532211
Q ss_pred CCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 925 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
.......++..|+|||...+..++.++||||||+++|||++ |+.||....
T Consensus 156 --~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~ 206 (256)
T cd05113 156 --TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFN 206 (256)
T ss_pred --eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCC
Confidence 11112235678999999988889999999999999999999 999997643
No 142
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.97 E-value=8.4e-31 Score=283.80 Aligned_cols=202 Identities=28% Similarity=0.422 Sum_probs=175.2
Q ss_pred hcccCCCeEeecCCeeEEEEEeCCCCEEEEEEecCCC-chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCC
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSD-ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPN 844 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 844 (1001)
++|++.+.||+|+||.||+|...+++.||+|.+.... ..+++.+|+.++++++||||+++++++...+..++||||+++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 85 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKY 85 (261)
T ss_pred hheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccC
Confidence 5688899999999999999998778899999986543 346799999999999999999999999999999999999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCC
Q 001873 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924 (1001)
Q Consensus 845 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~ 924 (1001)
++|.+++.+.....+++..+..++.|++.|+.|||+. +|+||||||+||++++++.+||+|||+++........
T Consensus 86 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~--- 159 (261)
T cd05068 86 GSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYE--- 159 (261)
T ss_pred CcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccCCccc---
Confidence 9999999876545689999999999999999999998 9999999999999999999999999999876422111
Q ss_pred CCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 925 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
.......+..|+|||+..+..++.++||||||+++|||+| |+.||.+..
T Consensus 160 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~ 209 (261)
T cd05068 160 ---AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMT 209 (261)
T ss_pred ---ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCC
Confidence 1111123457999999998899999999999999999999 999997654
No 143
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.5e-32 Score=297.97 Aligned_cols=195 Identities=32% Similarity=0.480 Sum_probs=168.4
Q ss_pred eEeecCCeeEEEEEeC-CCCEEEEEEecCCC--chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCCCCHHH
Q 001873 773 VIGTGSSGVVYRVTIP-NGETLAVKKMWSSD--ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSS 849 (1001)
Q Consensus 773 ~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~ 849 (1001)
++|+|.||+||.|++. +..++|||.+.... ..+.+..||..-++++|.|||+++|.+.+.++.-|.||-++||+|.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 6999999999999976 46789999985443 44778999999999999999999999999999999999999999999
Q ss_pred HhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEEC-CCCcEEEecccccccccCCCCCCCCCCC
Q 001873 850 LLHGA-GKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLG-PGYQAYLADFGLARIVSGSGDDNCSKTN 927 (1001)
Q Consensus 850 ~l~~~-~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~-~~~~~ki~Dfgla~~~~~~~~~~~~~~~ 927 (1001)
+++.. +.-.-.+.++--+.+||++|+.|||++ .|||||||-+||+++ -.|.+||+|||-++.+..- ..
T Consensus 662 LLrskWGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi-------nP 731 (1226)
T KOG4279|consen 662 LLRSKWGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI-------NP 731 (1226)
T ss_pred HHHhccCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccC-------Cc
Confidence 99763 222236778888899999999999999 999999999999996 6799999999999887532 22
Q ss_pred CCCcccccccccCcccccc--CCCCCccchHHHHHHHHHHHhCCCCCCCCCC
Q 001873 928 QRPQLAGSYGYMAPEHASM--QRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977 (1001)
Q Consensus 928 ~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~ 977 (1001)
...+..||..|||||++.. +.|+.++|||||||++.||.||++||-..-.
T Consensus 732 ~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgs 783 (1226)
T KOG4279|consen 732 CTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGS 783 (1226)
T ss_pred cccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCC
Confidence 3345679999999999854 6799999999999999999999999987643
No 144
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.97 E-value=6.4e-31 Score=293.42 Aligned_cols=198 Identities=21% Similarity=0.301 Sum_probs=163.6
Q ss_pred CCeEeecCCeeEEEEEeC---CCCEEEEEEecCCCchhhHHHHHHHhhccCCCceeeEEeeeec--CCceEEEEEccCCC
Q 001873 771 ANVIGTGSSGVVYRVTIP---NGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSN--KNLKLLFYDYLPNG 845 (1001)
Q Consensus 771 ~~~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~--~~~~~lv~e~~~~g 845 (1001)
.++||+|+||+||+|+.+ +++.||+|++........+.+|+.++++++||||+++++++.. +...++||||+. +
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-~ 84 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-H 84 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC-C
Confidence 357999999999999864 4688999998766656678899999999999999999998753 456789999996 6
Q ss_pred CHHHHhhcCC-------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEE----CCCCcEEEeccccccc
Q 001873 846 SLSSLLHGAG-------KGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLL----GPGYQAYLADFGLARI 914 (1001)
Q Consensus 846 sL~~~l~~~~-------~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll----~~~~~~ki~Dfgla~~ 914 (1001)
+|.+++.... ...+++..+..++.|++.|++|||++ +|+||||||+||++ +.++.+||+|||+|+.
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07868 85 DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecCceec
Confidence 8888875321 22478889999999999999999998 99999999999999 4567999999999987
Q ss_pred ccCCCCCCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 915 VSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
+..... .........||+.|+|||++.+ ..++.++||||+||++|||++|+.||....
T Consensus 162 ~~~~~~----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~ 220 (317)
T cd07868 162 FNSPLK----PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred cCCCCc----cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCc
Confidence 643211 1122234578999999999876 568999999999999999999999997543
No 145
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.97 E-value=6.4e-31 Score=293.09 Aligned_cols=200 Identities=25% Similarity=0.405 Sum_probs=167.9
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCC----EEEEEEecCCC---chhhHHHHHHHhhccCCCceeeEEeeeecCCceEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGE----TLAVKKMWSSD---ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLL 837 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~~~---~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~l 837 (1001)
.+|+..+.||+|+||+||+|++. +++ .||||++.... ..+++.+|+.+++.++||||+++++++... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 46889999999999999999864 333 48999986433 236788999999999999999999998765 4679
Q ss_pred EEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccC
Q 001873 838 FYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSG 917 (1001)
Q Consensus 838 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~ 917 (1001)
|+||+++|+|.+++.+. ...+++..+++++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++.+..
T Consensus 86 v~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~ 161 (316)
T cd05108 86 ITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 161 (316)
T ss_pred eeecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEccccccccccC
Confidence 99999999999999864 33478889999999999999999998 999999999999999999999999999987643
Q ss_pred CCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 918 SGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 918 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
..... ......++..|+|||++....++.++|||||||++||+++ |+.||+..
T Consensus 162 ~~~~~-----~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~ 215 (316)
T cd05108 162 DEKEY-----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 215 (316)
T ss_pred CCcce-----eccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCC
Confidence 22110 1111234678999999999999999999999999999998 99999764
No 146
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.4e-32 Score=293.58 Aligned_cols=216 Identities=25% Similarity=0.377 Sum_probs=184.2
Q ss_pred cccCCCeEeecCCeeEEEEEeCC-CCEEEEEEecCCC-chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCC
Q 001873 767 NLTSANVIGTGSSGVVYRVTIPN-GETLAVKKMWSSD-ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPN 844 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 844 (1001)
+.++..+||-|.||.||.|.|+. .-.||||.++.+. +.++|..|+.+|+.++|||+|+++|+|..+..+|||+|||.+
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~y 347 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCY 347 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccC
Confidence 45667889999999999999874 6789999987654 348999999999999999999999999999999999999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCC
Q 001873 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924 (1001)
Q Consensus 845 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~ 924 (1001)
|+|.+|+++.....++....+.++.||+.||+||..+ ++|||||..+|+|+.++..+|++|||+++.+..+.+....
T Consensus 348 GNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHA 424 (1157)
T KOG4278|consen 348 GNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHA 424 (1157)
T ss_pred ccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchhhhhcCCceeccc
Confidence 9999999998887788888899999999999999998 9999999999999999999999999999999866543322
Q ss_pred CCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCcCcccchhhhhccc
Q 001873 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTLPGGAPLVQWTPLMFLML 993 (1001)
Q Consensus 925 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~~~~~~l~~~~~~~~~~~ 993 (1001)
.. .-...|.|||.+....++.|+|||+|||++||+.| |..||-+- +-.+++...+....|.
T Consensus 425 GA------KFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGi--dlSqVY~LLEkgyRM~ 486 (1157)
T KOG4278|consen 425 GA------KFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI--DLSQVYGLLEKGYRMD 486 (1157)
T ss_pred Cc------cCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCc--cHHHHHHHHhcccccc
Confidence 21 23357999999999999999999999999999998 77777553 2234445555545544
No 147
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.97 E-value=8.5e-31 Score=282.87 Aligned_cols=200 Identities=28% Similarity=0.415 Sum_probs=171.7
Q ss_pred hcccCCCeEeecCCeeEEEEEeCCCCEEEEEEecCCC-chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCC
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSD-ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPN 844 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 844 (1001)
.+|++.+.||+|+||.||+|+++++..+|+|.+.... ...++.+|+.++++++||||+++++++...+..++||||+++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 3578889999999999999998877899999886433 345788999999999999999999999999999999999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCC
Q 001873 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924 (1001)
Q Consensus 845 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~ 924 (1001)
++|.+++.... ..+++..+.+++.|++.|++|||+. +|+||||||+||++++++.+||+|||.++.......
T Consensus 84 ~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~---- 155 (256)
T cd05059 84 GCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY---- 155 (256)
T ss_pred CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceecccccc----
Confidence 99999997643 3578999999999999999999998 999999999999999999999999999876532110
Q ss_pred CCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 925 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
.......++..|+|||.+.+..++.++||||||+++||+++ |+.||+..
T Consensus 156 --~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~ 205 (256)
T cd05059 156 --TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERF 205 (256)
T ss_pred --cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCC
Confidence 01111124457999999998899999999999999999999 89999764
No 148
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.97 E-value=8.5e-31 Score=287.43 Aligned_cols=203 Identities=26% Similarity=0.463 Sum_probs=172.0
Q ss_pred hcccCCCeEeecCCeeEEEEEeCC------CCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCceE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIPN------GETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKL 836 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~ 836 (1001)
.+|++.+.||+|+||.||+|+... ...||+|.+..... ..++.+|++++++++||||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 468889999999999999998642 25799998865432 256889999999999999999999999989999
Q ss_pred EEEEccCCCCHHHHhhcCCC--------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCC
Q 001873 837 LFYDYLPNGSLSSLLHGAGK--------------GGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGY 902 (1001)
Q Consensus 837 lv~e~~~~gsL~~~l~~~~~--------------~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~ 902 (1001)
++|||+++|+|.+++..... ..+++..+..++.|++.|++|||+. +++||||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCCC
Confidence 99999999999999975421 3468888999999999999999998 999999999999999999
Q ss_pred cEEEecccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 903 QAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 903 ~~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
.+||+|||+++........ .......+++.|+|||.+.+..++.++|||||||++|||++ |..||.+..
T Consensus 162 ~~~L~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~ 231 (283)
T cd05048 162 TVKISDFGLSRDIYSADYY-----RVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFS 231 (283)
T ss_pred cEEECCCcceeeccccccc-----cccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCC
Confidence 9999999999865332111 11222356789999999988899999999999999999998 999998654
No 149
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.97 E-value=5.6e-31 Score=299.56 Aligned_cols=197 Identities=22% Similarity=0.299 Sum_probs=168.2
Q ss_pred HHHhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecC-----
Q 001873 763 DVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNK----- 832 (1001)
Q Consensus 763 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~----- 832 (1001)
.+.++|++.+.||+|+||.||++... .++.||||++.... ..+.+.+|+.+++.++||||+++++++...
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred chhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 45688999999999999999999865 68899999986432 235678899999999999999999977543
Q ss_pred -CceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccc
Q 001873 833 -NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGL 911 (1001)
Q Consensus 833 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgl 911 (1001)
...++||||++ +++.+++.. .+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 101 ~~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~ 172 (364)
T cd07875 101 FQDVYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 172 (364)
T ss_pred cCeEEEEEeCCC-CCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCCC
Confidence 35699999997 578777753 378888999999999999999998 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 912 ARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 912 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 173 a~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 228 (364)
T cd07875 173 ARTAGTS--------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228 (364)
T ss_pred ccccCCC--------CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Confidence 9864321 1123347899999999999999999999999999999999999999754
No 150
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.97 E-value=7.2e-31 Score=291.75 Aligned_cols=199 Identities=21% Similarity=0.310 Sum_probs=169.3
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC---chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD---ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
++|++.+.||+|+||+||+|+.+ +++.||+|++.... ....+.+|+.++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 56889999999999999999865 67889999886432 224678899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
++ ++|.+++.+. ...+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 86 ~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 158 (309)
T cd07872 86 LD-KDLKQYMDDC-GNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVPT-- 158 (309)
T ss_pred CC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCCc--
Confidence 97 5888888754 23478889999999999999999998 99999999999999999999999999987543211
Q ss_pred CCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
.......+|+.|+|||++.+ ..++.++||||+||++|||+||+.||....
T Consensus 159 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~ 209 (309)
T cd07872 159 -----KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGST 209 (309)
T ss_pred -----cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 11223367899999998754 568899999999999999999999997653
No 151
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.97 E-value=1e-30 Score=283.18 Aligned_cols=201 Identities=29% Similarity=0.426 Sum_probs=172.2
Q ss_pred hcccCCCeEeecCCeeEEEEEeCCCCEEEEEEecCCCc-hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCC
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDE-SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPN 844 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 844 (1001)
.+|++.++||+|+||.||+|+..+...||+|++..... .+.+.+|++++++++||||+++++++.+ +..++||||+++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~~ 84 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSK 84 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcCCC
Confidence 56899999999999999999987777899999875433 4678999999999999999999998754 557899999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCC
Q 001873 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924 (1001)
Q Consensus 845 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~ 924 (1001)
|+|.+++.+.....+++..+..++.|++.|++|+|+. +++||||||+||++++++.+||+|||.++.+......
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~--- 158 (262)
T cd05071 85 GSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT--- 158 (262)
T ss_pred CcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeeccccccc---
Confidence 9999999865445678999999999999999999998 9999999999999999999999999999866432111
Q ss_pred CCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 925 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
......++..|+|||+.....++.++||||||+++|||+| |+.||....
T Consensus 159 ---~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~ 208 (262)
T cd05071 159 ---ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV 208 (262)
T ss_pred ---cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC
Confidence 1112346678999999988899999999999999999999 888987653
No 152
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.97 E-value=2.4e-31 Score=288.84 Aligned_cols=198 Identities=29% Similarity=0.453 Sum_probs=170.8
Q ss_pred ccCCCeEeecCCeeEEEEEeC---CCC--EEEEEEecCCC---chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 768 LTSANVIGTGSSGVVYRVTIP---NGE--TLAVKKMWSSD---ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 768 ~~~~~~lG~G~fg~Vy~~~~~---~~~--~vavK~~~~~~---~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
.+..++||.|-||.||+|..- .|+ .||||..+.+. ..+.|.+|..+|+.++|||||+++|+|.+. ..||||
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~Wivm 469 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWIVM 469 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeEEE
Confidence 445578999999999999753 233 48889876643 347899999999999999999999999865 579999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
|.++.|.|..|++.. +..++..+...++.||+.|+.|||+. ..|||||..+|||+....-+|++|||+++.+..+.
T Consensus 470 EL~~~GELr~yLq~n-k~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~ 545 (974)
T KOG4257|consen 470 ELAPLGELREYLQQN-KDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDA 545 (974)
T ss_pred ecccchhHHHHHHhc-cccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhhccccc
Confidence 999999999999875 45688888899999999999999998 99999999999999999999999999999997766
Q ss_pred CCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
.+..+... -...|||||.+..++++.++|||.|||+|||++. |..||.+-.
T Consensus 546 yYkaS~~k------LPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvk 597 (974)
T KOG4257|consen 546 YYKASRGK------LPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVK 597 (974)
T ss_pred hhhccccc------cceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccc
Confidence 55543222 2357999999999999999999999999999986 999998764
No 153
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.97 E-value=1.2e-30 Score=286.97 Aligned_cols=197 Identities=26% Similarity=0.365 Sum_probs=166.4
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhcc---CCCceeeEEeeeec-----CC
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSI---RHKNIVRLLGWGSN-----KN 833 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l---~h~nIv~l~~~~~~-----~~ 833 (1001)
+|++.+.||+|+||+||+|+.. +++.||+|.+.... ....+.+|+.+++++ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4888899999999999999875 68999999885432 123566788877665 69999999998754 34
Q ss_pred ceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccc
Q 001873 834 LKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLAR 913 (1001)
Q Consensus 834 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~ 913 (1001)
..++||||++ ++|.+++.......+++..+..++.|++.|++|+|++ +|+||||||+||+++.++.+||+|||+++
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCccc
Confidence 5789999997 5899998876555689999999999999999999998 99999999999999999999999999998
Q ss_pred cccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 914 IVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 157 ~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~ 210 (288)
T cd07863 157 IYSCQ--------MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN 210 (288)
T ss_pred cccCc--------ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCC
Confidence 65321 1122346899999999998889999999999999999999999999654
No 154
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.4e-32 Score=294.86 Aligned_cols=193 Identities=32% Similarity=0.403 Sum_probs=168.4
Q ss_pred hcccCCCeEeecCCeeEEEEEe-CCCCEEEEEEecCCC----c-hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTI-PNGETLAVKKMWSSD----E-SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~-~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
+.|.-.+.||.|+||.||.+++ ++.+.||||++.-.. + ..++..|+..+++++|||++.+.|+|-.+...|+||
T Consensus 26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVM 105 (948)
T KOG0577|consen 26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVM 105 (948)
T ss_pred HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHH
Confidence 4566677899999999999985 478999999984322 1 257899999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
|||- |+-.|++.-+ ++++.+..+..|..+.++|+.|||+. +.||||||+.|||+++.|.||++|||.|..+.+.
T Consensus 106 EYCl-GSAsDlleVh-kKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA- 179 (948)
T KOG0577|consen 106 EYCL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA- 179 (948)
T ss_pred HHHh-ccHHHHHHHH-hccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCch-
Confidence 9996 7888887655 45678888999999999999999998 9999999999999999999999999999876533
Q ss_pred CCCCCCCCCCCcccccccccCcccc---ccCCCCCccchHHHHHHHHHHHhCCCCCCC
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHA---SMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~SlG~il~elltg~~Pf~~ 974 (1001)
..++|||.|||||++ ..+.|+-++||||+|++..|+.-+++|+-.
T Consensus 180 ----------nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFn 227 (948)
T KOG0577|consen 180 ----------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 227 (948)
T ss_pred ----------hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccC
Confidence 346899999999986 458899999999999999999999999643
No 155
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.97 E-value=8.8e-31 Score=298.72 Aligned_cols=198 Identities=25% Similarity=0.341 Sum_probs=167.9
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecCC-----ceE
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKN-----LKL 836 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~-----~~~ 836 (1001)
+|++.+.||+|+||+||+++.. +++.||||++.... ..+++.+|+.+++.++||||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4778899999999999999864 78999999885432 2357889999999999999999999988766 789
Q ss_pred EEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEeccccccccc
Q 001873 837 LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVS 916 (1001)
Q Consensus 837 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~ 916 (1001)
+||||+. ++|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+|+...
T Consensus 81 lv~e~~~-~~l~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~ 154 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARVEE 154 (372)
T ss_pred EEeeccc-cCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceeecc
Confidence 9999996 6888888653 4589999999999999999999998 99999999999999999999999999998653
Q ss_pred CCCCCCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 917 GSGDDNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 917 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
... ........+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+..
T Consensus 155 ~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 209 (372)
T cd07853 155 PDE------SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQS 209 (372)
T ss_pred cCc------cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCC
Confidence 221 112223468899999999876 457899999999999999999999997653
No 156
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.97 E-value=8.5e-31 Score=286.97 Aligned_cols=202 Identities=26% Similarity=0.448 Sum_probs=172.2
Q ss_pred hcccCCCeEeecCCeeEEEEEeCC------CCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCceE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIPN------GETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKL 836 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~ 836 (1001)
+.|.+.+.||+|+||.||+|+..+ ++.||||.+..... .+.+.+|++++++++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 467888999999999999998643 47899999865433 367899999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHhhcCC------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcE
Q 001873 837 LFYDYLPNGSLSSLLHGAG------------KGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQA 904 (1001)
Q Consensus 837 lv~e~~~~gsL~~~l~~~~------------~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 904 (1001)
+||||+++++|.++++..+ ...+++..+..++.|++.|+.|+|+. +++||||||+||+++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCCeE
Confidence 9999999999999997543 23467888999999999999999998 99999999999999999999
Q ss_pred EEecccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 905 YLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 905 ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
||+|||.++.+...... .......+++.|+|||++.+..++.++||||+||++|||++ |+.||...
T Consensus 162 kl~d~g~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~ 228 (280)
T cd05049 162 KIGDFGMSRDVYTTDYY-----RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGL 228 (280)
T ss_pred EECCcccceecccCcce-----ecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCC
Confidence 99999999765322111 11122346788999999999999999999999999999999 99998754
No 157
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=7.8e-31 Score=300.72 Aligned_cols=199 Identities=26% Similarity=0.292 Sum_probs=171.4
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC---CCCEEEEEEecCCCchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP---NGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
..+|++.+.||+|+||.||++... .+..||||.+... +...+|++++++++||||+++++++......++|||+
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~---~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~ 167 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG---KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPK 167 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc---ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehh
Confidence 457999999999999999998753 3678999987543 3467899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
+. ++|.+++.. ...+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++........
T Consensus 168 ~~-~~l~~~l~~--~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~- 240 (392)
T PHA03207 168 YK-CDLFTYVDR--SGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD- 240 (392)
T ss_pred cC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccccCcccc-
Confidence 96 789998854 34589999999999999999999998 999999999999999999999999999976543211
Q ss_pred CCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~ 977 (1001)
........||+.|+|||++....++.++||||+||++|||++|+.||.+...
T Consensus 241 ----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~ 292 (392)
T PHA03207 241 ----TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQV 292 (392)
T ss_pred ----cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCC
Confidence 1122345799999999999999999999999999999999999999976543
No 158
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=5.9e-32 Score=313.26 Aligned_cols=200 Identities=26% Similarity=0.307 Sum_probs=176.9
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecC-----CCchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEE
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWS-----SDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLF 838 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~-----~~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv 838 (1001)
.++|.++++||+|+||.|..++++ +++.||+|++.+ ..+..-|..|=.+|..-+.+-|+.++-.|.++.+.|+|
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlV 153 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLV 153 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEE
Confidence 367999999999999999999976 588999998854 34556799999999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCC
Q 001873 839 YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGS 918 (1001)
Q Consensus 839 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~ 918 (1001)
||||+||+|-.++.+.+ .+++..++-++..|+-|+.-+|+. |+|||||||+|||+|..|++|++|||.+-.+..+
T Consensus 154 MdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFGsClkm~~d 228 (1317)
T KOG0612|consen 154 MDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDAD 228 (1317)
T ss_pred EecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccchhHHhcCCC
Confidence 99999999999999865 588888888899999999999998 9999999999999999999999999998877654
Q ss_pred CCCCCCCCCCCCcccccccccCccccc----c-CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 919 GDDNCSKTNQRPQLAGSYGYMAPEHAS----M-QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 919 ~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
+.- .....+|||.|.+||++. + +.|+..+|-||+||++|||+.|..||...
T Consensus 229 G~V------~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad 284 (1317)
T KOG0612|consen 229 GTV------RSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD 284 (1317)
T ss_pred CcE------EeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH
Confidence 332 233458999999999874 2 67899999999999999999999999643
No 159
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.97 E-value=7.1e-31 Score=297.74 Aligned_cols=197 Identities=22% Similarity=0.290 Sum_probs=168.1
Q ss_pred HHHhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecC-----
Q 001873 763 DVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNK----- 832 (1001)
Q Consensus 763 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~----- 832 (1001)
.+.++|++.+.||+|+||.||++... .++.||||++.... ..+.+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 46789999999999999999999864 68999999986432 235677899999999999999999987543
Q ss_pred -CceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccc
Q 001873 833 -NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGL 911 (1001)
Q Consensus 833 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgl 911 (1001)
...++||||++ +++.+.+.. .+++..+..++.|+++|++|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 94 ~~~~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg~ 165 (355)
T cd07874 94 FQDVYLVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 165 (355)
T ss_pred cceeEEEhhhhc-ccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCcc
Confidence 34689999997 567777653 378888999999999999999998 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 912 ARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 912 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.
T Consensus 166 ~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 221 (355)
T cd07874 166 ARTAGTS--------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221 (355)
T ss_pred cccCCCc--------cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9864321 1223347899999999999989999999999999999999999999754
No 160
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.97 E-value=1.7e-30 Score=281.83 Aligned_cols=201 Identities=27% Similarity=0.426 Sum_probs=173.5
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccC
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLP 843 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~ 843 (1001)
.+|++.+.||+|+||.||+|..+ .++.||+|.+.... ..+++.+|++++++++||||+++++++..++..++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT 85 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCC
Confidence 45778889999999999999865 58899999886543 23678899999999999999999999999999999999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCC
Q 001873 844 NGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNC 923 (1001)
Q Consensus 844 ~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~ 923 (1001)
+++|.+++.......+++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||.+.........
T Consensus 86 ~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~-- 160 (263)
T cd05052 86 YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-- 160 (263)
T ss_pred CCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccccccccceee--
Confidence 99999999876556689999999999999999999998 9999999999999999999999999999876432111
Q ss_pred CCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 924 SKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 924 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
......++..|+|||.+.+..++.++|||||||++|||++ |..||.+.
T Consensus 161 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~ 209 (263)
T cd05052 161 ----AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 209 (263)
T ss_pred ----ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCC
Confidence 1112234678999999988899999999999999999998 99998754
No 161
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.97 E-value=1.5e-30 Score=291.57 Aligned_cols=203 Identities=23% Similarity=0.260 Sum_probs=167.6
Q ss_pred CCCeEeec--CCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEcc
Q 001873 770 SANVIGTG--SSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYL 842 (1001)
Q Consensus 770 ~~~~lG~G--~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 842 (1001)
+.++||+| +|++||+++.+ +++.||||++.... ..+.+.+|+++++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 45689999 78899999864 78999999986542 2246778999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCC
Q 001873 843 PNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922 (1001)
Q Consensus 843 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~ 922 (1001)
++|+|.+++.......+++..+.+++.|++.|++|||+. +|+||||||+||+++.++.++++||+.+......+...
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL 158 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence 999999999765445689999999999999999999998 99999999999999999999999998765443221111
Q ss_pred CCCCCCCCcccccccccCcccccc--CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 923 CSKTNQRPQLAGSYGYMAPEHASM--QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 923 ~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
...........++..|+|||++.. ..++.++||||+||++|||++|+.||...
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 213 (327)
T cd08227 159 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 213 (327)
T ss_pred cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence 111111223357788999999865 46889999999999999999999999754
No 162
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.97 E-value=1.7e-30 Score=280.54 Aligned_cols=200 Identities=30% Similarity=0.429 Sum_probs=175.1
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC----CchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS----DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
+|++.+.||+|+||.||+|+.+ +++.||+|.+... ...+++.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 3677889999999999999875 6899999987532 2346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
+++++|.++++......+++..+.+++.|++.|+.|||+. +++||||||+||+++.++.+||+|||.++.+....
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~-- 155 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT-- 155 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCcc--
Confidence 9999999999876455688999999999999999999998 99999999999999999999999999988664321
Q ss_pred CCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
.......|++.|+|||+..+..++.++|+||||+++|||++|+.||....
T Consensus 156 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 205 (256)
T cd08529 156 -----NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN 205 (256)
T ss_pred -----chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Confidence 11223468889999999998889999999999999999999999997654
No 163
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=1.6e-31 Score=247.84 Aligned_cols=217 Identities=25% Similarity=0.359 Sum_probs=179.3
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc----hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE----SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
+|...++||+|.||+||+|+.+ +++.||+|++.-+++ .....+||.+++.++|.|||+++++...++..-+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 4556678999999999999954 689999999865433 25688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
|+ .+|..|.... +..++.+.++.++.|+++|+.++|++ ++.|||+||+|.+++.+|+.|++|||+|+-+.-+
T Consensus 83 cd-qdlkkyfdsl-ng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgip--- 154 (292)
T KOG0662|consen 83 CD-QDLKKYFDSL-NGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIP--- 154 (292)
T ss_pred hh-HHHHHHHHhc-CCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCc---
Confidence 96 6899998765 45689999999999999999999998 9999999999999999999999999999876422
Q ss_pred CCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCcCcccchhhhhcccchhhhc
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLT-GRHPLDPTLPGGAPLVQWTPLMFLMLNLEAEQ 999 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~~~~~~l~~~~~~~~~~~~~~~~~ 999 (1001)
.......+-|.+|.+|+++-+ +-|+...|+||-|||+.|+.. |+ +.+|+.+-.+|..+++...|.+.+|+
T Consensus 155 ----vrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagr----plfpg~dvddqlkrif~~lg~p~ed~ 226 (292)
T KOG0662|consen 155 ----VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGR----PLFPGNDVDDQLKRIFRLLGTPTEDQ 226 (292)
T ss_pred ----eEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCC----CCCCCCcHHHHHHHHHHHhCCCcccc
Confidence 122223367899999998865 568899999999999999986 65 34555566666666666666555543
No 164
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.97 E-value=2.3e-30 Score=280.23 Aligned_cols=202 Identities=26% Similarity=0.404 Sum_probs=173.9
Q ss_pred HhcccCCCeEeecCCeeEEEEEeCCCCEEEEEEecCCC-chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccC
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSD-ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLP 843 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~ 843 (1001)
.+.|++.++||+|+||.||+|..++++.||+|.+.... ..+++.+|+.++++++|+||+++++++. .+..++||||++
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYME 83 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCC
Confidence 35788999999999999999998889999999886543 3468999999999999999999999874 456799999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCC
Q 001873 844 NGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNC 923 (1001)
Q Consensus 844 ~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~ 923 (1001)
+++|.+++.......+++.++..++.|++.|++|||+. +++||||||+||++++++.++++|||.+........
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~--- 157 (260)
T cd05067 84 NGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIEDNEY--- 157 (260)
T ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCCCCc---
Confidence 99999999876556689999999999999999999998 999999999999999999999999999976542111
Q ss_pred CCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 924 SKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 924 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
.......++..|+|||++....++.++||||||+++||+++ |+.||....
T Consensus 158 ---~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 208 (260)
T cd05067 158 ---TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMT 208 (260)
T ss_pred ---ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCC
Confidence 11112245678999999988889999999999999999999 999997543
No 165
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.97 E-value=3.7e-31 Score=296.83 Aligned_cols=190 Identities=26% Similarity=0.308 Sum_probs=160.1
Q ss_pred EeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhcc---CCCceeeEEeeeecCCceEEEEEccCC
Q 001873 774 IGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGSI---RHKNIVRLLGWGSNKNLKLLFYDYLPN 844 (1001)
Q Consensus 774 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l---~h~nIv~l~~~~~~~~~~~lv~e~~~~ 844 (1001)
||+|+||+||+|+.. +++.||||++.... +...+..|..++.+. +||||+++++++......++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999865 68999999985321 223445566666655 699999999999999999999999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCC
Q 001873 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924 (1001)
Q Consensus 845 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~ 924 (1001)
|+|.+++.+. ..+++..+..++.||+.|++|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~------ 149 (330)
T cd05586 81 GELFWHLQKE--GRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTD------ 149 (330)
T ss_pred ChHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCC------
Confidence 9999998763 4589999999999999999999998 9999999999999999999999999998753211
Q ss_pred CCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 925 KTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 925 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
........||+.|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~ 200 (330)
T cd05586 150 -NKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAE 200 (330)
T ss_pred -CCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCC
Confidence 112234579999999999865 45889999999999999999999999764
No 166
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.97 E-value=2.5e-30 Score=279.85 Aligned_cols=200 Identities=30% Similarity=0.454 Sum_probs=172.1
Q ss_pred hcccCCCeEeecCCeeEEEEEeCCCCEEEEEEecCCC-chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCC
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSD-ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPN 844 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 844 (1001)
++|++.++||+|+||.||+|...++..||+|.+.... ..+.+.+|+.++++++|+||+++++++.. ...+++|||+++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~~ 84 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVTEYMSK 84 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEEEEEecCC
Confidence 5788999999999999999998888899999986543 34679999999999999999999998754 557899999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCC
Q 001873 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924 (1001)
Q Consensus 845 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~ 924 (1001)
++|.+++++.....+++.++..++.|++.|++|||+. +|+||||||+||++++++.++|+|||.+..+......
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~--- 158 (260)
T cd05070 85 GSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT--- 158 (260)
T ss_pred CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCcccc---
Confidence 9999999875555689999999999999999999998 9999999999999999999999999999865432111
Q ss_pred CCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 925 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
......++..|+|||......++.++||||||+++|||++ |+.||...
T Consensus 159 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~ 207 (260)
T cd05070 159 ---ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGM 207 (260)
T ss_pred ---cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCC
Confidence 1112235568999999988889999999999999999999 89999764
No 167
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-31 Score=268.54 Aligned_cols=199 Identities=23% Similarity=0.345 Sum_probs=169.4
Q ss_pred HHhcccCC-CeEeecCCeeEEEEEeC-CCCEEEEEEecCCCchhhHHHHHHHhhcc-CCCceeeEEeeee----cCCceE
Q 001873 764 VVRNLTSA-NVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSSEIQTLGSI-RHKNIVRLLGWGS----NKNLKL 836 (1001)
Q Consensus 764 ~~~~~~~~-~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~----~~~~~~ 836 (1001)
++++|++. ++||-|-.|+|-....+ +++++|+|++. +....++|++.--+. .|||||.+++++. ......
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~---Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLL 135 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLL---DSPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLL 135 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHh---cCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeE
Confidence 45566654 57999999999886654 79999999984 344567888874444 7999999999764 456778
Q ss_pred EEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEEC---CCCcEEEecccccc
Q 001873 837 LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLG---PGYQAYLADFGLAR 913 (1001)
Q Consensus 837 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~---~~~~~ki~Dfgla~ 913 (1001)
+|||.|+||.|.+.+++++...+++.++.+|+.||+.|+.|||+. .|.||||||+|+|.. .+..+|++|||+|+
T Consensus 136 iVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK 212 (400)
T KOG0604|consen 136 IVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDFGFAK 212 (400)
T ss_pred eeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEeccccccc
Confidence 999999999999999999888899999999999999999999998 999999999999996 45689999999998
Q ss_pred cccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 914 IVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
.-.. .....+.+-||.|.|||++...+|+...|+||+||+||-|++|.+||....
T Consensus 213 ~t~~--------~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~h 267 (400)
T KOG0604|consen 213 ETQE--------PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 267 (400)
T ss_pred ccCC--------CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccC
Confidence 6432 233445588999999999999999999999999999999999999997653
No 168
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.97 E-value=1e-30 Score=295.12 Aligned_cols=198 Identities=22% Similarity=0.316 Sum_probs=168.7
Q ss_pred HHHHHhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecC---
Q 001873 761 IDDVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNK--- 832 (1001)
Q Consensus 761 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~--- 832 (1001)
..++.++|++.+.||+|+||+||+|... +++.||||++.... ..+.+.+|+.++++++||||+++++++...
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07878 10 VWEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSI 89 (343)
T ss_pred HhhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccc
Confidence 3456788999999999999999999864 68899999986432 225677899999999999999999877532
Q ss_pred ---CceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecc
Q 001873 833 ---NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADF 909 (1001)
Q Consensus 833 ---~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Df 909 (1001)
...++++|++ +++|.++++. ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+||
T Consensus 90 ~~~~~~~~~~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Df 162 (343)
T cd07878 90 ENFNEVYLVTNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDF 162 (343)
T ss_pred cccCcEEEEeecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCC
Confidence 3568999988 7899988863 3589999999999999999999998 9999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 910 GLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 910 gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
|+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 163 g~~~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 219 (343)
T cd07878 163 GLARQADDE----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGN 219 (343)
T ss_pred ccceecCCC----------cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCC
Confidence 999865321 223468999999999876 57889999999999999999999999753
No 169
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.97 E-value=2.6e-30 Score=279.05 Aligned_cols=196 Identities=30% Similarity=0.455 Sum_probs=171.2
Q ss_pred hcccCCCeEeecCCeeEEEEEeCCCCEEEEEEecCCCchhhHHHHHHHhhccCCCceeeEEeee-ecCCceEEEEEccCC
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWG-SNKNLKLLFYDYLPN 844 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~Ei~~l~~l~h~nIv~l~~~~-~~~~~~~lv~e~~~~ 844 (1001)
++|++.+.||+|+||.||+++.+ +..||+|.+......+.+.+|+.++++++|+||+++++++ ...+..++||||+++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~ 84 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAK 84 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCchHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCC
Confidence 46888999999999999999874 7889999987766667899999999999999999999975 455678999999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCC
Q 001873 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924 (1001)
Q Consensus 845 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~ 924 (1001)
++|.+++++.+....++..+.+++.|++.|++|||++ +++||||||+||++++++.+|++|||+++......
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~----- 156 (256)
T cd05082 85 GSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----- 156 (256)
T ss_pred CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceeccccC-----
Confidence 9999999876555688999999999999999999998 99999999999999999999999999987643211
Q ss_pred CCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 925 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
....++..|+|||++....++.++|||||||++|||++ |+.||...
T Consensus 157 -----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~ 203 (256)
T cd05082 157 -----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI 203 (256)
T ss_pred -----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence 11234568999999988889999999999999999998 99998653
No 170
>PTZ00284 protein kinase; Provisional
Probab=99.97 E-value=1.1e-30 Score=306.39 Aligned_cols=197 Identities=19% Similarity=0.257 Sum_probs=163.1
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-chhhHHHHHHHhhccCC------CceeeEEeeeecC-Cce
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-ESGAFSSEIQTLGSIRH------KNIVRLLGWGSNK-NLK 835 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~Ei~~l~~l~h------~nIv~l~~~~~~~-~~~ 835 (1001)
.++|++.++||+|+||+||+|... .++.||||++.... ..+.+..|+++++.++| ++++++++++... +..
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~ 207 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHM 207 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceE
Confidence 468999999999999999999865 57899999985432 23456678887777654 4588999988654 578
Q ss_pred EEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCC-------------
Q 001873 836 LLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGY------------- 902 (1001)
Q Consensus 836 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~------------- 902 (1001)
++|||++ +++|.+++.+. ..+++..+..|+.||+.||+|||++ .+||||||||+|||++.++
T Consensus 208 ~iv~~~~-g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~ 282 (467)
T PTZ00284 208 CIVMPKY-GPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENILMETSDTVVDPVTNRALPP 282 (467)
T ss_pred EEEEecc-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEecCCcccccccccccCC
Confidence 8999988 78999998764 3588999999999999999999973 2999999999999998665
Q ss_pred ---cEEEecccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 903 ---QAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 903 ---~~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
.+||+|||.+.... ......+||+.|+|||++.+..|+.++|||||||++|||++|+.||++..
T Consensus 283 ~~~~vkl~DfG~~~~~~----------~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~ 349 (467)
T PTZ00284 283 DPCRVRICDLGGCCDER----------HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHD 349 (467)
T ss_pred CCceEEECCCCccccCc----------cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 49999999875421 12234579999999999999999999999999999999999999998643
No 171
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=1.4e-31 Score=254.33 Aligned_cols=207 Identities=25% Similarity=0.339 Sum_probs=167.5
Q ss_pred ccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC---chhhHHHHHHHhhcc-CCCceeeEEeeeecCCceEEEEEcc
Q 001873 768 LTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD---ESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYL 842 (1001)
Q Consensus 768 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~ 842 (1001)
......||+|+||.|-+.++. +|..+|||++.... +.++..+|+.+..+. .+|.+|.|+|...+++..|+.||.|
T Consensus 48 L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M 127 (282)
T KOG0984|consen 48 LVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELM 127 (282)
T ss_pred hhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHh
Confidence 344567999999999998864 79999999986543 346677888885554 7999999999998999999999999
Q ss_pred CCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCC
Q 001873 843 PNGSLSSLLHGA--GKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGD 920 (1001)
Q Consensus 843 ~~gsL~~~l~~~--~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~ 920 (1001)
+ .||..+-++. ....+++...-+||..+.+|+.|||++ ..|+|||+||+|||++.+|++||||||.+..+...
T Consensus 128 ~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dS-- 202 (282)
T KOG0984|consen 128 D-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINYDGQVKICDFGISGYLVDS-- 202 (282)
T ss_pred h-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEccCCcEEEcccccceeehhh--
Confidence 6 6887776542 234578888889999999999999998 48999999999999999999999999999876432
Q ss_pred CCCCCCCCCCcccccccccCccccc----cCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcCcccc
Q 001873 921 DNCSKTNQRPQLAGSYGYMAPEHAS----MQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQW 985 (1001)
Q Consensus 921 ~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~~~~~l~~~ 985 (1001)
-..+...|...|||||.+. ...|+.++||||+|+.+.||.+++.||+.-..+=.++.|-
T Consensus 203 ------iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqv 265 (282)
T KOG0984|consen 203 ------IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQV 265 (282)
T ss_pred ------hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHH
Confidence 1222235778999999873 3589999999999999999999999998655443444333
No 172
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.97 E-value=1.5e-30 Score=281.93 Aligned_cols=201 Identities=29% Similarity=0.427 Sum_probs=176.9
Q ss_pred hcccCCCeEeecCCeeEEEEEeCCCCEEEEEEecCCCc--hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccC
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDE--SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLP 843 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~ 843 (1001)
.+|++.++||+|+||.||+|+..+++.||+|.+..... ..++.+|+.+++.++||||+++++++...+..++||||++
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 85 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELME 85 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecc
Confidence 46888999999999999999988899999999865543 4678999999999999999999999999999999999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCC
Q 001873 844 NGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNC 923 (1001)
Q Consensus 844 ~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~ 923 (1001)
+++|.+++++.....+++..+..++.|++.|+.|||+. +|+||||||+||++++++.+||+|||.+........
T Consensus 86 ~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~--- 159 (261)
T cd05148 86 KGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY--- 159 (261)
T ss_pred cCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCCccc---
Confidence 99999999876556689999999999999999999998 999999999999999999999999999986532211
Q ss_pred CCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 924 SKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 924 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
......++..|+|||......++.++||||||+++|+|++ |+.||....
T Consensus 160 ----~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~ 209 (261)
T cd05148 160 ----LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMN 209 (261)
T ss_pred ----cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCC
Confidence 1112245678999999988899999999999999999998 899997654
No 173
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=1.2e-30 Score=287.95 Aligned_cols=205 Identities=26% Similarity=0.409 Sum_probs=177.3
Q ss_pred ccHHHHHhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC--chhhHHHHHHHhhccCCCceeeEEeeeecCCce
Q 001873 759 FSIDDVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD--ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLK 835 (1001)
Q Consensus 759 ~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~ 835 (1001)
.++.+..++|+..+.||+|+||.||+|... +++.||+|.+.... ..+.+.+|+.+++.++||||+++++.+......
T Consensus 13 ~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~ 92 (296)
T cd06654 13 VSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDEL 92 (296)
T ss_pred cccCCcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEE
Confidence 344555678999999999999999999864 68999999886433 336788999999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccc
Q 001873 836 LLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIV 915 (1001)
Q Consensus 836 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~ 915 (1001)
++||||+++++|.+++.+ ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.+...
T Consensus 93 ~lv~e~~~~~~L~~~~~~---~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~ 166 (296)
T cd06654 93 WVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166 (296)
T ss_pred EEeecccCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhc
Confidence 999999999999999974 3478889999999999999999998 9999999999999999999999999998765
Q ss_pred cCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 916 SGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
.... .......|++.|+|||.+....++.++|||||||++|+|++|+.||....
T Consensus 167 ~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~ 220 (296)
T cd06654 167 TPEQ-------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 220 (296)
T ss_pred cccc-------cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Confidence 3221 11223468899999999988888999999999999999999999997654
No 174
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.97 E-value=2.2e-30 Score=284.09 Aligned_cols=202 Identities=25% Similarity=0.446 Sum_probs=170.5
Q ss_pred hcccCCCeEeecCCeeEEEEEe-----CCCCEEEEEEecCCCch---hhHHHHHHHhhccCCCceeeEEeeeecCCceEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTI-----PNGETLAVKKMWSSDES---GAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLL 837 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~~~---~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~l 837 (1001)
+.|++.+.||+|+||+||+|+. ..+..||+|.+...... +++.+|+.++++++||||+++++++......++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4578889999999999999974 24688999998653322 568899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHhhcCC---------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCC
Q 001873 838 FYDYLPNGSLSSLLHGAG---------------KGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGY 902 (1001)
Q Consensus 838 v~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~ 902 (1001)
||||+++++|.+++.... ...+++.++..++.|++.|++|||++ +|+||||||+||++++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCCC
Confidence 999999999999985321 12467888899999999999999998 999999999999999999
Q ss_pred cEEEecccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 903 QAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 903 ~~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
.+||+|||+++........ .......++..|+|||++.+..++.++||||||+++|||++ |..||.+.
T Consensus 162 ~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~ 230 (283)
T cd05090 162 HVKISDLGLSREIYSADYY-----RVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGF 230 (283)
T ss_pred cEEeccccccccccCCcce-----ecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCC
Confidence 9999999999876432211 11222345678999999988889999999999999999998 99999764
No 175
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.97 E-value=2.3e-30 Score=283.04 Aligned_cols=204 Identities=25% Similarity=0.373 Sum_probs=170.6
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC------CCCEEEEEEecCCC---chhhHHHHHHHhhccCCCceeeEEeeeecCCce
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP------NGETLAVKKMWSSD---ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLK 835 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~---~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~ 835 (1001)
.++|++.+.||+|+||.||+|.+. .+..||||++.... ...++.+|+.+++.++||||+++++++.+....
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~ 84 (277)
T cd05062 5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 84 (277)
T ss_pred HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCe
Confidence 467999999999999999998753 35679999885433 235688999999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHhhcCCC--------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEe
Q 001873 836 LLFYDYLPNGSLSSLLHGAGK--------GGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLA 907 (1001)
Q Consensus 836 ~lv~e~~~~gsL~~~l~~~~~--------~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~ 907 (1001)
++||||+++|+|.+++++... ...++..+..++.|++.|++|||+. +++||||||+||++++++.+|++
T Consensus 85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~l~ 161 (277)
T cd05062 85 LVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEEEC
Confidence 999999999999999975321 2357788899999999999999998 99999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 908 DFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 908 Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
|||+++......... ......+++.|+|||++....++.++|||||||++|||++ |..||.+..
T Consensus 162 dfg~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~ 226 (277)
T cd05062 162 DFGMTRDIYETDYYR-----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMS 226 (277)
T ss_pred CCCCccccCCcceee-----cCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC
Confidence 999987653321111 1112345788999999988889999999999999999999 788987653
No 176
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.97 E-value=7.5e-31 Score=283.55 Aligned_cols=198 Identities=36% Similarity=0.572 Sum_probs=166.2
Q ss_pred CCCeEeecCCeeEEEEEeC-----CCCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 770 SANVIGTGSSGVVYRVTIP-----NGETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 770 ~~~~lG~G~fg~Vy~~~~~-----~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
..+.||+|+||.||+|++. .+..|+||.+..... .+.+.+|++.+++++||||++++|++...+..++||||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 4568999999999999975 367899999965433 36899999999999999999999999988889999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
+++|+|.++++......+++..+.+|+.||+.||.|||++ +++|+||+++||++++++.+||+|||+++.......
T Consensus 83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~- 158 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK- 158 (259)
T ss_dssp -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS-
T ss_pred cccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc-
Confidence 9999999999987556789999999999999999999998 999999999999999999999999999987622111
Q ss_pred CCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
........+...|+|||.+....++.++||||||+++|||++ |+.||...
T Consensus 159 ----~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~ 209 (259)
T PF07714_consen 159 ----YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY 209 (259)
T ss_dssp ----EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS
T ss_pred ----ccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 111222346778999999998889999999999999999999 78898654
No 177
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.97 E-value=3.4e-30 Score=281.96 Aligned_cols=192 Identities=27% Similarity=0.361 Sum_probs=168.0
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC---chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEcc
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD---ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYL 842 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 842 (1001)
+|+..+.||+|+||.||+|... +++.||+|.+.... ..+++.+|+.++++++||||+++++++...+..++||||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 5788899999999999999864 68999999885432 2256889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCC
Q 001873 843 PNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922 (1001)
Q Consensus 843 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~ 922 (1001)
++++|..+. ..++..+..++.|++.|+.|||+. +|+|+||||+||+++.++.+||+|||++......
T Consensus 82 ~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~---- 148 (279)
T cd06619 82 DGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS---- 148 (279)
T ss_pred CCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceecccc----
Confidence 999997653 267888889999999999999998 9999999999999999999999999999765321
Q ss_pred CCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 923 CSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 923 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
......||..|+|||++.+..++.++||||+|+++|+|++|+.||....
T Consensus 149 -----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~ 197 (279)
T cd06619 149 -----IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQ 197 (279)
T ss_pred -----cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhc
Confidence 1223478999999999998899999999999999999999999997643
No 178
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.97 E-value=1.7e-30 Score=291.50 Aligned_cols=203 Identities=28% Similarity=0.381 Sum_probs=168.6
Q ss_pred hcccCCCeEeecCCeeEEEEEeC------CCCEEEEEEecCCCc---hhhHHHHHHHhhcc-CCCceeeEEeeeec-CCc
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP------NGETLAVKKMWSSDE---SGAFSSEIQTLGSI-RHKNIVRLLGWGSN-KNL 834 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~-~~~ 834 (1001)
++|++.+.||+|+||.||+|... +++.||+|++..... .+.+.+|+.+++++ +|+||+++++++.. +..
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~ 86 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP 86 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence 47899999999999999998632 357899999865432 24677899999999 89999999998764 456
Q ss_pred eEEEEEccCCCCHHHHhhcCCC----------------------------------------------------------
Q 001873 835 KLLFYDYLPNGSLSSLLHGAGK---------------------------------------------------------- 856 (1001)
Q Consensus 835 ~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 856 (1001)
.+++|||+++++|.+++.....
T Consensus 87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (337)
T cd05054 87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY 166 (337)
T ss_pred EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence 7899999999999999864321
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCCCCCCCCccccc
Q 001873 857 -GGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGS 935 (1001)
Q Consensus 857 -~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt 935 (1001)
..+++..+.+++.||+.|++|||+. +|+||||||+||++++++++||+|||+++.+...... .......++
T Consensus 167 ~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~-----~~~~~~~~~ 238 (337)
T cd05054 167 KEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY-----VRKGDARLP 238 (337)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcch-----hhccCCCCC
Confidence 2568889999999999999999998 9999999999999999999999999999876432211 112233566
Q ss_pred ccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 936 YGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 936 ~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
..|+|||++.+..++.++||||+||++|||++ |+.||.+..
T Consensus 239 ~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~ 280 (337)
T cd05054 239 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQ 280 (337)
T ss_pred ccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCC
Confidence 78999999999999999999999999999998 999997643
No 179
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=2.5e-30 Score=285.54 Aligned_cols=205 Identities=27% Similarity=0.423 Sum_probs=178.1
Q ss_pred cHHHHHhcccCCCeEeecCCeeEEEEEe-CCCCEEEEEEecCCC--chhhHHHHHHHhhccCCCceeeEEeeeecCCceE
Q 001873 760 SIDDVVRNLTSANVIGTGSSGVVYRVTI-PNGETLAVKKMWSSD--ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKL 836 (1001)
Q Consensus 760 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~ 836 (1001)
+..+..++|++.+.||+|+||.||++.. .+++.||+|.+.... ..+.+.+|+.+++.++||||+++++++...+..+
T Consensus 13 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~ 92 (297)
T cd06656 13 SVGDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELW 92 (297)
T ss_pred ccCChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEE
Confidence 4456678999999999999999999986 479999999886433 3356888999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEeccccccccc
Q 001873 837 LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVS 916 (1001)
Q Consensus 837 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~ 916 (1001)
+||||+++++|.+++.+ ...++..+..++.|++.|+.|||+. +++||||||+||+++.++.++|+|||.+....
T Consensus 93 lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~ 166 (297)
T cd06656 93 VVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 166 (297)
T ss_pred EeecccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEcc
Confidence 99999999999999974 3478889999999999999999998 99999999999999999999999999987653
Q ss_pred CCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCC
Q 001873 917 GSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977 (1001)
Q Consensus 917 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~ 977 (1001)
... .......+++.|+|||...+..++.++||||+||++|++++|+.||....+
T Consensus 167 ~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~ 220 (297)
T cd06656 167 PEQ-------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP 220 (297)
T ss_pred CCc-------cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCc
Confidence 221 112234688999999999988899999999999999999999999976543
No 180
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.97 E-value=2.4e-30 Score=279.24 Aligned_cols=199 Identities=23% Similarity=0.317 Sum_probs=174.3
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC---chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEcc
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD---ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYL 842 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 842 (1001)
+|++.+.||+|+||.||+++.. +++.||+|.+.... ..+.+.+|+.+++.++||||+++++.+.+++..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4778899999999999999865 68999999875432 3367888999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCC
Q 001873 843 PNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922 (1001)
Q Consensus 843 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~ 922 (1001)
++|+|.+++.......+++..+..++.|++.|+.|||+. +|+|+||||+||++++++.++++|||.++.......
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~-- 155 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA-- 155 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeeccccc--
Confidence 999999998765555678999999999999999999998 999999999999999999999999999976543211
Q ss_pred CCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 923 CSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 923 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
......|++.|+|||++.+..++.++|+||+|+++|+|++|+.||...
T Consensus 156 -----~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~ 203 (255)
T cd08219 156 -----YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQAN 203 (255)
T ss_pred -----ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCC
Confidence 122346889999999998888999999999999999999999999864
No 181
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.97 E-value=3.1e-30 Score=287.96 Aligned_cols=196 Identities=21% Similarity=0.306 Sum_probs=162.1
Q ss_pred CeEeecCCeeEEEEEeC---CCCEEEEEEecCCCchhhHHHHHHHhhccCCCceeeEEeeee--cCCceEEEEEccCCCC
Q 001873 772 NVIGTGSSGVVYRVTIP---NGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGS--NKNLKLLFYDYLPNGS 846 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~--~~~~~~lv~e~~~~gs 846 (1001)
.+||+|+||+||+|+.+ ++..||+|++........+.+|+.++++++||||+++++++. .+...++||||++ ++
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-~~ 85 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE-HD 85 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-Cc
Confidence 57999999999999864 457899999876665667889999999999999999999874 3557789999996 58
Q ss_pred HHHHhhcC-------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEE----CCCCcEEEecccccccc
Q 001873 847 LSSLLHGA-------GKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLL----GPGYQAYLADFGLARIV 915 (1001)
Q Consensus 847 L~~~l~~~-------~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll----~~~~~~ki~Dfgla~~~ 915 (1001)
|.+++... ....+++..+..++.|++.|++|||+. +|+||||||+||++ +.++++||+|||+++..
T Consensus 86 l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~ 162 (317)
T cd07867 86 LWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 162 (317)
T ss_pred HHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeeccceecc
Confidence 88877532 122468889999999999999999998 99999999999999 56679999999999876
Q ss_pred cCCCCCCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 916 SGSGDDNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
..... .........||+.|+|||++.+ ..++.++||||+||++|||+||+.||...
T Consensus 163 ~~~~~----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 163 NSPLK----PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred CCCcc----cccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 43221 1112234578999999999866 45789999999999999999999999754
No 182
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.97 E-value=3e-30 Score=283.79 Aligned_cols=203 Identities=24% Similarity=0.424 Sum_probs=171.7
Q ss_pred hcccCCCeEeecCCeeEEEEEeC------CCCEEEEEEecCCCc--hhhHHHHHHHhhccCCCceeeEEeeeecCCceEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP------NGETLAVKKMWSSDE--SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLL 837 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~--~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~l 837 (1001)
.+|.+.+.||+|+||+||++... ++..||+|.+..... .+.+.+|++++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 46888999999999999999742 345689998865432 3578999999999999999999999999999999
Q ss_pred EEEccCCCCHHHHhhcCC-----------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEE
Q 001873 838 FYDYLPNGSLSSLLHGAG-----------KGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYL 906 (1001)
Q Consensus 838 v~e~~~~gsL~~~l~~~~-----------~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki 906 (1001)
||||+++++|.+++...+ ...+++..+..++.|++.|++|||++ +++||||||+||++++++.+|+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcEEe
Confidence 999999999999997542 12478999999999999999999998 9999999999999999999999
Q ss_pred ecccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 907 ADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 907 ~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
+|||+++.+...... .......++..|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 162 ~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~ 227 (288)
T cd05093 162 GDFGMSRDVYSTDYY-----RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS 227 (288)
T ss_pred ccCCccccccCCcee-----ecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 999999865332111 11122345778999999998899999999999999999998 999997653
No 183
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.97 E-value=3.3e-30 Score=286.17 Aligned_cols=196 Identities=27% Similarity=0.400 Sum_probs=171.1
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEcc
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYL 842 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 842 (1001)
+|++.+.||+|+||.||+++.. ++..||+|.+..... ..++.+|++++++++||||+++++++.+++..++||||+
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~ 81 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHM 81 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeecc
Confidence 5888999999999999999865 578899998754422 256889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCC
Q 001873 843 PNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922 (1001)
Q Consensus 843 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~ 922 (1001)
++++|.++++.. ..+++..+..++.|++.|+.|||+.+ +++||||||+||+++.++.+||+|||.+......
T Consensus 82 ~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---- 153 (308)
T cd06615 82 DGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---- 153 (308)
T ss_pred CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCccccccc----
Confidence 999999999864 44788999999999999999999742 8999999999999999999999999998754321
Q ss_pred CCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 923 CSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 923 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
......|++.|+|||.+.+..++.++||||||+++|||++|+.||...
T Consensus 154 -----~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~ 201 (308)
T cd06615 154 -----MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPP 201 (308)
T ss_pred -----ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCc
Confidence 122346889999999998888999999999999999999999999643
No 184
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.97 E-value=4.8e-30 Score=278.55 Aligned_cols=203 Identities=32% Similarity=0.475 Sum_probs=174.0
Q ss_pred cccCCCeEeecCCeeEEEEEeCCCCEEEEEEecCCC--------chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEE
Q 001873 767 NLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSD--------ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLF 838 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv 838 (1001)
+|+..+.||+|+||+||+|...+++.||||.+.... ..+.+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 478889999999999999998889999999875432 124588899999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCC
Q 001873 839 YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGS 918 (1001)
Q Consensus 839 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~ 918 (1001)
|||+++++|.+++.+. ..+++..+..++.|++.|++|+|+. +|+|+||||+||++++++.++|+|||.+......
T Consensus 81 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 155 (265)
T cd06631 81 MEFVPGGSISSILNRF--GPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWV 155 (265)
T ss_pred EecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhhhc
Confidence 9999999999999764 3478889999999999999999998 9999999999999999999999999998865322
Q ss_pred CCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 919 GDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 919 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.... ..........|+..|+|||++.+..++.++||||+|+++|||++|+.||...
T Consensus 156 ~~~~-~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~ 211 (265)
T cd06631 156 GLHG-THSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASM 211 (265)
T ss_pred cccc-cccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccC
Confidence 1111 1112223446899999999999888999999999999999999999999754
No 185
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.97 E-value=4.1e-30 Score=279.44 Aligned_cols=199 Identities=26% Similarity=0.352 Sum_probs=171.4
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC--chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD--ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+|+.++++++||||+++++++..++..++||||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 357999999999999999999964 68899999885432 335688899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
+++++|.+++++. ..+++..+..++.|++.|++|||+. +|+|||+||+||+++.++.+||+|||+++.+....
T Consensus 88 ~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~-- 160 (267)
T cd06646 88 CGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITATI-- 160 (267)
T ss_pred CCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeecccc--
Confidence 9999999998753 3578999999999999999999998 99999999999999999999999999998763221
Q ss_pred CCCCCCCCCcccccccccCccccc---cCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHAS---MQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.......|++.|+|||.+. ...++.++||||+||++|||++|+.||...
T Consensus 161 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~ 212 (267)
T cd06646 161 -----AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDL 212 (267)
T ss_pred -----cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCcccc
Confidence 1122346889999999874 455788999999999999999999998644
No 186
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.97 E-value=1.5e-30 Score=312.46 Aligned_cols=204 Identities=25% Similarity=0.372 Sum_probs=167.9
Q ss_pred HHhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeec--CCceE
Q 001873 764 VVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSN--KNLKL 836 (1001)
Q Consensus 764 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~--~~~~~ 836 (1001)
...+|++.+.||+|+||+||+++.. .++.||+|.+.... ....+.+|+.++++++|||||++++++.. ...+|
T Consensus 11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly 90 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY 90 (1021)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence 4568999999999999999999975 57789999875432 23578899999999999999999998754 45689
Q ss_pred EEEEccCCCCHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhhCCC----CCeEEeCCCCCCeEECC----------
Q 001873 837 LFYDYLPNGSLSSLLHGAG--KGGADWEARYEVVLGVAHALAYLHHDCM----PPILHGDVKAMNVLLGP---------- 900 (1001)
Q Consensus 837 lv~e~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~~i~~~l~yLH~~~~----~~ivH~Dlkp~NIll~~---------- 900 (1001)
+||||+++|+|.+++.... ...+++..++.|+.||+.||.|||+... .+||||||||+|||++.
T Consensus 91 IVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~ 170 (1021)
T PTZ00266 91 ILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITA 170 (1021)
T ss_pred EEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccc
Confidence 9999999999999997532 2458999999999999999999998421 25999999999999964
Q ss_pred -------CCcEEEecccccccccCCCCCCCCCCCCCCcccccccccCcccccc--CCCCCccchHHHHHHHHHHHhCCCC
Q 001873 901 -------GYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM--QRITEKSDVYSFGVVLLEVLTGRHP 971 (1001)
Q Consensus 901 -------~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~SlG~il~elltg~~P 971 (1001)
.+.+||+|||++..+... .......||+.|+|||++.. ..++.++||||||||+|||+||+.|
T Consensus 171 ~~~n~ng~~iVKLsDFGlAr~l~~~--------s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~P 242 (1021)
T PTZ00266 171 QANNLNGRPIAKIGDFGLSKNIGIE--------SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTP 242 (1021)
T ss_pred cccccCCCCceEEccCCcccccccc--------ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCC
Confidence 235899999999865321 11223479999999998853 5688999999999999999999999
Q ss_pred CCCC
Q 001873 972 LDPT 975 (1001)
Q Consensus 972 f~~~ 975 (1001)
|...
T Consensus 243 F~~~ 246 (1021)
T PTZ00266 243 FHKA 246 (1021)
T ss_pred CCcC
Confidence 9753
No 187
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.97 E-value=5e-30 Score=277.57 Aligned_cols=201 Identities=28% Similarity=0.420 Sum_probs=171.7
Q ss_pred hcccCCCeEeecCCeeEEEEEeCCCCEEEEEEecCCC-chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCC
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSD-ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPN 844 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 844 (1001)
++|++.+.||+|+||.||+|+...+..||+|++.... ..+.+.+|++++++++|||++++++++.. +..++||||+++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~ 84 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVTEFMGK 84 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEEEEcCCC
Confidence 4688889999999999999998777789999876533 34678999999999999999999998754 567899999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCC
Q 001873 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924 (1001)
Q Consensus 845 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~ 924 (1001)
++|.+++++......++..+..++.|++.|++|||+. +++||||||+||++++++.++|+|||.++.......
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~---- 157 (260)
T cd05069 85 GSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY---- 157 (260)
T ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCcc----
Confidence 9999999875555678999999999999999999998 999999999999999999999999999976532211
Q ss_pred CCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 925 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
.......++..|+|||...+..++.++||||||+++|||+| |+.||....
T Consensus 158 --~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~ 208 (260)
T cd05069 158 --TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMV 208 (260)
T ss_pred --cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 11112245678999999988889999999999999999999 999997653
No 188
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.97 E-value=4.5e-30 Score=280.92 Aligned_cols=201 Identities=25% Similarity=0.379 Sum_probs=166.9
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCC----EEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCceEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGE----TLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLL 837 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~l 837 (1001)
++|++.+.||+|+||+||+|.+. +++ .||+|.+..... ..++..|+..+++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 46788899999999999999864 344 477887753322 2567778889999999999999998764 45678
Q ss_pred EEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccC
Q 001873 838 FYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSG 917 (1001)
Q Consensus 838 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~ 917 (1001)
++||+++|+|.+++... ...+++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||.++....
T Consensus 86 i~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~ 161 (279)
T cd05111 86 VTQLSPLGSLLDHVRQH-RDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADLLYP 161 (279)
T ss_pred EEEeCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence 99999999999999764 24579999999999999999999998 999999999999999999999999999987643
Q ss_pred CCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 918 SGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 918 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
.... .......++..|+|||.+....++.++||||||+++||+++ |+.||.+..
T Consensus 162 ~~~~-----~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~ 216 (279)
T cd05111 162 DDKK-----YFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMR 216 (279)
T ss_pred CCcc-----cccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCC
Confidence 2211 11123356778999999988899999999999999999998 999997654
No 189
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.97 E-value=3.3e-30 Score=281.03 Aligned_cols=201 Identities=26% Similarity=0.371 Sum_probs=170.7
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-chhhHHHHHHHhhcc-CCCceeeEEeeeecC------Cce
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-ESGAFSSEIQTLGSI-RHKNIVRLLGWGSNK------NLK 835 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~------~~~ 835 (1001)
...|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+|+.+++++ +||||+++++++... ...
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 84 (272)
T cd06637 5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQL 84 (272)
T ss_pred hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEE
Confidence 456888889999999999999865 58899999885433 346788999999998 799999999987642 457
Q ss_pred EEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccc
Q 001873 836 LLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIV 915 (1001)
Q Consensus 836 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~ 915 (1001)
++||||+++++|.+++.......+++..+..++.|++.|++|||++ +|+||||||+||++++++.+||+|||++...
T Consensus 85 ~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~ 161 (272)
T cd06637 85 WLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 161 (272)
T ss_pred EEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCCCceec
Confidence 8999999999999999876556688999999999999999999998 9999999999999999999999999999765
Q ss_pred cCCCCCCCCCCCCCCcccccccccCccccc-----cCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 916 SGSGDDNCSKTNQRPQLAGSYGYMAPEHAS-----MQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.... .......|++.|+|||++. ...++.++||||+||++|||++|+.||+..
T Consensus 162 ~~~~-------~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~ 219 (272)
T cd06637 162 DRTV-------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM 219 (272)
T ss_pred cccc-------ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence 3211 1223456899999999885 346788999999999999999999999754
No 190
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.97 E-value=6.1e-30 Score=277.92 Aligned_cols=201 Identities=28% Similarity=0.425 Sum_probs=171.5
Q ss_pred hcccCCCeEeecCCeeEEEEEeCC----CCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIPN----GETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLF 838 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv 838 (1001)
++|++.+.||+|+||+||+|+++. ...||||.+..... ..++.+|+.++++++||||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 468899999999999999998742 45799998865432 25688999999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCC
Q 001873 839 YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGS 918 (1001)
Q Consensus 839 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~ 918 (1001)
|||+++++|.+++.... ..+++..+.+++.|++.|++|||+. +|+||||||+||++++++.+|++|||+++.....
T Consensus 84 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd05033 84 TEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDS 159 (266)
T ss_pred EEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhccccc
Confidence 99999999999997643 3579999999999999999999998 9999999999999999999999999999876421
Q ss_pred CCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 919 GDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 919 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
.... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||...
T Consensus 160 ~~~~-----~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~ 212 (266)
T cd05033 160 EATY-----TTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDM 212 (266)
T ss_pred ccce-----eccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCC
Confidence 1110 1112235678999999998899999999999999999998 99999654
No 191
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.97 E-value=4.5e-30 Score=278.07 Aligned_cols=202 Identities=30% Similarity=0.446 Sum_probs=175.9
Q ss_pred HhcccCCCeEeecCCeeEEEEEeCCCCEEEEEEecCCC-chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccC
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSD-ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLP 843 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~ 843 (1001)
.++|++.++||+|+||.||+|..++++.||||.+.... ..+++.+|+.++++++|+||+++++++......++||||++
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 84 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMS 84 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccC
Confidence 46789999999999999999998888899999986543 34689999999999999999999999998889999999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCC
Q 001873 844 NGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNC 923 (1001)
Q Consensus 844 ~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~ 923 (1001)
+++|.+++.+.....+++..+..++.|++.|+.|||+. +++||||||+||++++++.+|++|||.++.+.....
T Consensus 85 ~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~--- 158 (261)
T cd05034 85 KGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIEDDEY--- 158 (261)
T ss_pred CCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccchhh---
Confidence 99999999876556689999999999999999999998 999999999999999999999999999886542111
Q ss_pred CCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 924 SKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 924 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
.......++..|+|||.+.+..++.++||||+|+++||+++ |+.||.+.
T Consensus 159 ---~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 208 (261)
T cd05034 159 ---TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGM 208 (261)
T ss_pred ---hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 11111234568999999998889999999999999999998 99999654
No 192
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.97 E-value=2e-30 Score=280.63 Aligned_cols=196 Identities=33% Similarity=0.509 Sum_probs=171.5
Q ss_pred ccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCchh----hHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEcc
Q 001873 768 LTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESG----AFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYL 842 (1001)
Q Consensus 768 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 842 (1001)
|++.+.||+|+||+||+++.. +++.||+|++....... ...+|+.++++++||||+++++++.++...++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 677889999999999999976 46689999997765442 2345999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCC
Q 001873 843 PNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922 (1001)
Q Consensus 843 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~ 922 (1001)
++++|.+++.. ...+++..+..++.|+++|++|||+. +|+||||||+||++++++.++|+|||.+.....
T Consensus 81 ~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~----- 150 (260)
T PF00069_consen 81 PGGSLQDYLQK--NKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLSE----- 150 (260)
T ss_dssp TTEBHHHHHHH--HSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEESTS-----
T ss_pred ccccccccccc--cccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc-----
Confidence 99999999983 34579999999999999999999998 999999999999999999999999999875411
Q ss_pred CCCCCCCCcccccccccCccccc-cCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 923 CSKTNQRPQLAGSYGYMAPEHAS-MQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 923 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.........++..|+|||++. ...++.++||||+|+++|+|++|+.||...
T Consensus 151 --~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~ 202 (260)
T PF00069_consen 151 --NNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEES 202 (260)
T ss_dssp --TTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTS
T ss_pred --cccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 112233457899999999998 888999999999999999999999999976
No 193
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.97 E-value=7e-30 Score=276.91 Aligned_cols=201 Identities=27% Similarity=0.418 Sum_probs=172.3
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-------chhhHHHHHHHhhccCCCceeeEEeeeecCCceEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-------ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLL 837 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-------~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~l 837 (1001)
+.|+..+.||+|+||.||.+... ++++||+|.+.... ..+.+.+|+.++++++||||+++++++.+++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 46888999999999999999864 68999999875332 12468889999999999999999999999999999
Q ss_pred EEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccC
Q 001873 838 FYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSG 917 (1001)
Q Consensus 838 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~ 917 (1001)
|+||+++++|.+++... ..+++..+.+++.|++.|+.|||+. +|+||||||+||++++++.++|+|||.++....
T Consensus 82 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~ 156 (263)
T cd06625 82 FMEYMPGGSVKDQLKAY--GALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQT 156 (263)
T ss_pred EEEECCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceeccc
Confidence 99999999999999764 3478888999999999999999998 999999999999999999999999999976533
Q ss_pred CCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 918 SGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 918 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
... .........|+..|+|||+..+..++.++||||+|+++|||++|+.||...
T Consensus 157 ~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 210 (263)
T cd06625 157 ICS----SGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEF 210 (263)
T ss_pred ccc----ccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCcccc
Confidence 211 111112345788999999999888999999999999999999999999653
No 194
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=3.2e-30 Score=297.35 Aligned_cols=194 Identities=25% Similarity=0.312 Sum_probs=167.2
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCC
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPN 844 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 844 (1001)
..|.+.+.||+|+||.||++.+. .++.||||... ...+.+|++++++++|+|||++++++...+..++|||++.
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~----~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~- 243 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW----YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR- 243 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc----ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-
Confidence 46889999999999999999976 57899999642 2356789999999999999999999999999999999995
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCC
Q 001873 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924 (1001)
Q Consensus 845 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~ 924 (1001)
++|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 244 ~~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~---- 315 (461)
T PHA03211 244 SDLYTYLGAR-LRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS---- 315 (461)
T ss_pred CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceecccccc----
Confidence 7899888653 23589999999999999999999998 999999999999999999999999999986543211
Q ss_pred CCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCC
Q 001873 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLD 973 (1001)
Q Consensus 925 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~ 973 (1001)
........||+.|+|||++.+..++.++|||||||++|||++|..|+-
T Consensus 316 -~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf 363 (461)
T PHA03211 316 -TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLF 363 (461)
T ss_pred -cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcc
Confidence 111224579999999999999999999999999999999999887653
No 195
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=1.2e-30 Score=287.52 Aligned_cols=199 Identities=26% Similarity=0.362 Sum_probs=176.5
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc----hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE----SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
+..|.+.+.||+|.|++|.+|++. ++..||+|.+.+..- .+.+.+|+++|..++|||||+++.+...+...|+||
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~ 134 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM 134 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence 467889999999999999999865 699999998855431 245889999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
||+.+|.+++|+.+++. ..+..+..++.|+.+|++|+|++ .|||||||++||+++.++++||+|||++..+...
T Consensus 135 eya~~ge~~~yl~~~gr--~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~- 208 (596)
T KOG0586|consen 135 EYASGGELFDYLVKHGR--MKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFDYG- 208 (596)
T ss_pred EeccCchhHHHHHhccc--chhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeeccc-
Confidence 99999999999998654 45577888899999999999999 9999999999999999999999999999887532
Q ss_pred CCCCCCCCCCCcccccccccCccccccCCC-CCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHASMQRI-TEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
....+.+|++.|.|||++.+..| ++++|+||+|+++|-++.|..||++..
T Consensus 209 -------~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~ 259 (596)
T KOG0586|consen 209 -------LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQN 259 (596)
T ss_pred -------ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcc
Confidence 33445689999999999998877 489999999999999999999999754
No 196
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.97 E-value=5.8e-30 Score=281.76 Aligned_cols=196 Identities=29% Similarity=0.377 Sum_probs=173.2
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC-----CchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS-----DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
++|++.+.||+|+||.||++... +++.||+|++... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 36888999999999999999865 6899999988542 22356889999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
||+++++|.+++... ..+++..+..++.|++.|++|||+. +|+||||+|+||+++.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~- 154 (290)
T cd05580 81 EYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR- 154 (290)
T ss_pred ecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCCC-
Confidence 999999999999764 4588999999999999999999998 9999999999999999999999999998865322
Q ss_pred CCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
.....|++.|+|||.+.+..++.++||||+|+++|+|++|+.||....
T Consensus 155 ---------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 202 (290)
T cd05580 155 ---------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN 202 (290)
T ss_pred ---------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence 223468899999999988888999999999999999999999997543
No 197
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.97 E-value=4.3e-30 Score=279.26 Aligned_cols=200 Identities=25% Similarity=0.337 Sum_probs=172.0
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+|++++++++||||+++++++.+.+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57889999999999999999865 68999999874321 2246889999999999999999999999889999999
Q ss_pred EccCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccC
Q 001873 840 DYLPNGSLSSLLHGA--GKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSG 917 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~ 917 (1001)
||+++|+|.+++... ....+++..+..++.|++.|++|||++ +++||||||+||+++.++.++|+|||.+..+..
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 999999999988642 234478899999999999999999998 999999999999999999999999999887532
Q ss_pred CCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 918 SGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 918 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.. .......|++.|+|||.+.+..++.++||||+|+++|||++|+.||...
T Consensus 159 ~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~ 209 (267)
T cd08228 159 KT-------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD 209 (267)
T ss_pred hh-------HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccc
Confidence 21 1112346888999999998888999999999999999999999998654
No 198
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.97 E-value=6.5e-30 Score=281.55 Aligned_cols=203 Identities=25% Similarity=0.452 Sum_probs=171.9
Q ss_pred hcccCCCeEeecCCeeEEEEEeC------CCCEEEEEEecCCCch--hhHHHHHHHhhccCCCceeeEEeeeecCCceEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP------NGETLAVKKMWSSDES--GAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLL 837 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~--~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~l 837 (1001)
++|.+.+.||+|+||.||+|+.. ++..||+|.+...... +.+.+|++++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 45788899999999999999742 3456899988654432 578999999999999999999999999999999
Q ss_pred EEEccCCCCHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCc
Q 001873 838 FYDYLPNGSLSSLLHGAG--------------KGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQ 903 (1001)
Q Consensus 838 v~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~ 903 (1001)
||||+++++|.+++.... ...+++..+.+++.|++.|++|||++ +|+||||||+||+++.++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCc
Confidence 999999999999997542 23478899999999999999999998 9999999999999999999
Q ss_pred EEEecccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 904 AYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 904 ~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
+||+|||++........ ........++..|+|||.+.+..++.++||||||+++|||+| |+.||....
T Consensus 162 ~~l~dfg~a~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 230 (291)
T cd05094 162 VKIGDFGMSRDVYSTDY-----YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS 230 (291)
T ss_pred EEECCCCcccccCCCce-----eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999999976533211 111223356789999999998899999999999999999999 999986643
No 199
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.97 E-value=9.1e-30 Score=274.83 Aligned_cols=199 Identities=25% Similarity=0.347 Sum_probs=174.3
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC----CchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS----DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
+|+..++||+|+||.||.++.. +++.||+|++... ...+++.+|++++++++|+||+++++++.+.+..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 4888999999999999998854 6899999987533 2335788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
+++++|.+++.+.....+++..+..++.|++.|+.|||+. +++||||||+||++++++.+||+|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~- 156 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS- 156 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEcccccc-
Confidence 9999999999875445679999999999999999999998 999999999999999999999999999986543221
Q ss_pred CCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
......|++.|+|||...+..++.++||||+|+++|||++|+.||+..
T Consensus 157 ------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~ 204 (256)
T cd08221 157 ------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDAT 204 (256)
T ss_pred ------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCC
Confidence 122346899999999998888899999999999999999999999764
No 200
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.97 E-value=7.1e-30 Score=276.37 Aligned_cols=201 Identities=26% Similarity=0.433 Sum_probs=173.2
Q ss_pred HhcccCCCeEeecCCeeEEEEEeCCCCEEEEEEecCCC-chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccC
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSD-ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLP 843 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~ 843 (1001)
.++|++.+.||+|+||.||+|+..++..||+|.+.... ..+.+.+|++++++++|+||+++++.+.+ ...+++|||++
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~ 83 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMA 83 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCC
Confidence 36788999999999999999998778889999886543 34678999999999999999999998877 67899999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCC
Q 001873 844 NGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNC 923 (1001)
Q Consensus 844 ~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~ 923 (1001)
+++|.+++........++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+........
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--- 157 (260)
T cd05073 84 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY--- 157 (260)
T ss_pred CCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccCCCc---
Confidence 99999999876555678899999999999999999998 999999999999999999999999999976532211
Q ss_pred CCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 924 SKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 924 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
.......++..|+|||++....++.++|+|||||++|+++| |+.||...
T Consensus 158 ---~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~ 207 (260)
T cd05073 158 ---TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM 207 (260)
T ss_pred ---ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCC
Confidence 11112245678999999988889999999999999999999 99999764
No 201
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.97 E-value=5.7e-30 Score=276.35 Aligned_cols=200 Identities=26% Similarity=0.371 Sum_probs=176.9
Q ss_pred hcccCCCeEeecCCeeEEEEEeCC-CCEEEEEEecCCCchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCC
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIPN-GETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPN 844 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 844 (1001)
++|+..+.||+|+||.||+|+..+ ++.||+|.+......+++.+|++++++++||||+++++++.+....++++||+++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~ 82 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGA 82 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCC
Confidence 468889999999999999999764 7899999987655567899999999999999999999999999999999999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCC
Q 001873 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924 (1001)
Q Consensus 845 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~ 924 (1001)
++|.+++... ...+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.+||+|||++........
T Consensus 83 ~~L~~~l~~~-~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~---- 154 (256)
T cd06612 83 GSVSDIMKIT-NKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA---- 154 (256)
T ss_pred CcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccCcc----
Confidence 9999999754 34579999999999999999999998 999999999999999999999999999987643211
Q ss_pred CCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 925 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
......|+..|+|||++.+..++.++||||||+++|+|++|+.||....
T Consensus 155 ---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~ 203 (256)
T cd06612 155 ---KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIH 203 (256)
T ss_pred ---ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcc
Confidence 1223457889999999988899999999999999999999999997643
No 202
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.97 E-value=6.1e-30 Score=275.85 Aligned_cols=196 Identities=31% Similarity=0.467 Sum_probs=171.1
Q ss_pred hcccCCCeEeecCCeeEEEEEeCCCCEEEEEEecCCCchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCCC
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNG 845 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 845 (1001)
++|++.+.||+|+||.||++.. .++.||+|++......+.+.+|+.++++++||||+++++++...+ .++||||++++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~v~e~~~~~ 83 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILHNG-LYIVMELMSKG 83 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCeEEEEEcCCC-cEEEEECCCCC
Confidence 5688999999999999999875 688999999876666678999999999999999999999887654 68999999999
Q ss_pred CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCCC
Q 001873 846 SLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSK 925 (1001)
Q Consensus 846 sL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~ 925 (1001)
+|.+++.......+++..+..++.|++.|+.|+|+. +++||||||+||+++.++.+||+|||.++......
T Consensus 84 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~------ 154 (254)
T cd05083 84 NLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV------ 154 (254)
T ss_pred CHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceeccccC------
Confidence 999999876555689999999999999999999998 99999999999999999999999999987642211
Q ss_pred CCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 926 TNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 926 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
.....+..|+|||.+.+..++.++||||+|+++|||++ |+.||....
T Consensus 155 ----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~ 202 (254)
T cd05083 155 ----DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMS 202 (254)
T ss_pred ----CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCC
Confidence 11123467999999988899999999999999999998 999997654
No 203
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.97 E-value=4.2e-30 Score=279.35 Aligned_cols=199 Identities=25% Similarity=0.358 Sum_probs=171.2
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC--chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD--ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
.++|++.+.||+|+||.||+|+.. +++.||+|.+.... ....+.+|+.+++.++||||+++++++...+..++||||
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~ 87 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF 87 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence 356888889999999999999864 68999999886543 234678899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
+++++|.+++... ..+++.++..++.|++.|++|||+. +++|+||||+||+++.++.+||+|||.+.......
T Consensus 88 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~-- 160 (267)
T cd06645 88 CGGGSLQDIYHVT--GPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITATI-- 160 (267)
T ss_pred cCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCcc--
Confidence 9999999998764 3588999999999999999999998 99999999999999999999999999987653211
Q ss_pred CCCCCCCCCcccccccccCccccc---cCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHAS---MQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.......|++.|+|||++. ...++.++||||+||++|||++|+.||...
T Consensus 161 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~ 212 (267)
T cd06645 161 -----AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDL 212 (267)
T ss_pred -----cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccc
Confidence 1123346899999999874 456889999999999999999999998644
No 204
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.97 E-value=1.2e-29 Score=275.86 Aligned_cols=203 Identities=32% Similarity=0.520 Sum_probs=172.9
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc-----------hhhHHHHHHHhhccCCCceeeEEeeeecCCc
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE-----------SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNL 834 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-----------~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~ 834 (1001)
+|.+.+.||+|+||.||+|... +++.||+|.+..... .+.+.+|+.++++++||||+++++++.+.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 4778889999999999999864 588999998854321 1457889999999999999999999999999
Q ss_pred eEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEeccccccc
Q 001873 835 KLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARI 914 (1001)
Q Consensus 835 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~ 914 (1001)
.++||||+++++|.+++... ..+++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||.++.
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~~~ 155 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISKK 155 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCCcc
Confidence 99999999999999999764 3478888999999999999999998 999999999999999999999999999987
Q ss_pred ccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 915 VSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
......... .........|+..|+|||.+.+..++.++||||+|+++|+|++|+.||...
T Consensus 156 ~~~~~~~~~-~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 215 (267)
T cd06628 156 LEANSLSTK-TNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDC 215 (267)
T ss_pred cccccccCC-ccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCc
Confidence 653221111 111223346889999999998888999999999999999999999999764
No 205
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.97 E-value=9e-30 Score=276.41 Aligned_cols=201 Identities=26% Similarity=0.388 Sum_probs=169.2
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-------chhhHHHHHHHhhccCCCceeeEEeeeecC--Cce
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-------ESGAFSSEIQTLGSIRHKNIVRLLGWGSNK--NLK 835 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-------~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~--~~~ 835 (1001)
.+|++.+.||+|+||.||.|+.. +++.||||++.... ..+.+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 46888999999999999999865 58999999874321 124678899999999999999999987653 467
Q ss_pred EEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccc
Q 001873 836 LLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIV 915 (1001)
Q Consensus 836 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~ 915 (1001)
++||||+++++|.+++.+.. .+++..+.+++.|++.|++|||+. +|+|+||||+||+++.++.+||+|||.++..
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~ 156 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG--ALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKRL 156 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCcccccc
Confidence 89999999999999997643 378888899999999999999998 9999999999999999999999999999865
Q ss_pred cCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 916 SGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
...... ........|+..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 157 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~ 212 (265)
T cd06652 157 QTICLS----GTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEF 212 (265)
T ss_pred cccccc----ccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCcc
Confidence 422111 11122346889999999998888999999999999999999999999753
No 206
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.97 E-value=7.8e-30 Score=284.54 Aligned_cols=208 Identities=24% Similarity=0.325 Sum_probs=176.6
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
++|+..+.||+|+||.||++... +++.||+|.+.... ..+.+.+|++++++++||||+++++.+.+....++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888899999999999999876 48999999886543 2356888999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
||+++++|.+++.+.....+++..+..++.|+++|++|||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence 999999999999865556689999999999999999999998 99999999999999999999999999987654322
Q ss_pred CCCCC----------------------CCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 920 DDNCS----------------------KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 920 ~~~~~----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
..... .........||..|+|||++.+..++.++||||||+++|+|++|+.||....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~ 236 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN 236 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 11100 0011223468999999999998889999999999999999999999997543
No 207
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.97 E-value=1.1e-29 Score=274.13 Aligned_cols=197 Identities=30% Similarity=0.465 Sum_probs=173.9
Q ss_pred hcccCCCeEeecCCeeEEEEEeCCCCEEEEEEecCCCc-hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCC
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDE-SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPN 844 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 844 (1001)
++|++.+.||+|+||.||+|... ++.||+|++..... .+++.+|+.++++++|+||+++++++.+.+..++||||+++
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 84 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAK 84 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCC
Confidence 46888899999999999999874 89999999976654 57899999999999999999999999988999999999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCC
Q 001873 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924 (1001)
Q Consensus 845 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~ 924 (1001)
++|.++++......+++..+..++.|++.|+.|||+. +++||||||+||+++.++.+||+|||.++.......
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~---- 157 (256)
T cd05039 85 GSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD---- 157 (256)
T ss_pred CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccccccccccc----
Confidence 9999999876555689999999999999999999998 999999999999999999999999999987532111
Q ss_pred CCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 925 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
...++..|+|||.+....++.++||||||+++||+++ |+.||....
T Consensus 158 ------~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~ 204 (256)
T cd05039 158 ------SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 204 (256)
T ss_pred ------cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 1234567999999988889999999999999999997 999987653
No 208
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.97 E-value=6.9e-30 Score=282.79 Aligned_cols=199 Identities=22% Similarity=0.320 Sum_probs=169.4
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC---chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD---ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
++|++.+.||+|+||.||+|+.+ +++.||+|.+.... ....+.+|+.++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 57899999999999999999865 68899999885432 234678899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
++ ++|.+++.+. ...+++..+..++.|+++|++|||+. +|+||||||+||++++++.+||+|||++.......
T Consensus 86 ~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-- 158 (301)
T cd07873 86 LD-KDLKQYLDDC-GNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT-- 158 (301)
T ss_pred cc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC--
Confidence 97 6999988764 33578899999999999999999998 99999999999999999999999999987543211
Q ss_pred CCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
.......+++.|+|||++.+ ..++.++||||+||++|||++|+.||....
T Consensus 159 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~ 209 (301)
T cd07873 159 -----KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGST 209 (301)
T ss_pred -----CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 11122357889999998765 457889999999999999999999997643
No 209
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.97 E-value=8.7e-30 Score=279.38 Aligned_cols=199 Identities=29% Similarity=0.383 Sum_probs=166.8
Q ss_pred cc-cCCCeEeecCCeeEEEEEe-----CCCCEEEEEEecCCC---chhhHHHHHHHhhccCCCceeeEEeeeecC--Cce
Q 001873 767 NL-TSANVIGTGSSGVVYRVTI-----PNGETLAVKKMWSSD---ESGAFSSEIQTLGSIRHKNIVRLLGWGSNK--NLK 835 (1001)
Q Consensus 767 ~~-~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~---~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~--~~~ 835 (1001)
+| +..+.||+|+||+||++.. .+++.||+|.+.... ..+.+.+|++++++++||||+++++++... ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (283)
T cd05080 4 RYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGL 83 (283)
T ss_pred hhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceE
Confidence 44 8889999999999988652 357899999986543 236788999999999999999999987653 457
Q ss_pred EEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccc
Q 001873 836 LLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIV 915 (1001)
Q Consensus 836 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~ 915 (1001)
++||||+++++|.+++... .+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++.+
T Consensus 84 ~lv~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 157 (283)
T cd05080 84 QLIMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 157 (283)
T ss_pred EEEecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeeccccccc
Confidence 8999999999999999753 489999999999999999999998 9999999999999999999999999999876
Q ss_pred cCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 916 SGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
....... .......++..|+|||......++.++||||||+++|||+||+.||...
T Consensus 158 ~~~~~~~----~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~ 213 (283)
T cd05080 158 PEGHEYY----RVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSP 213 (283)
T ss_pred CCcchhh----ccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCC
Confidence 4322110 1112224566799999998888999999999999999999999998654
No 210
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.97 E-value=8.9e-30 Score=281.75 Aligned_cols=204 Identities=28% Similarity=0.368 Sum_probs=173.1
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC------CCCEEEEEEecCCCc---hhhHHHHHHHhhcc-CCCceeeEEeeeecCCc
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP------NGETLAVKKMWSSDE---SGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNL 834 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~~~ 834 (1001)
.++|++.+.||+|+||.||+++.. .+..||||++..... .+.+.+|+.+++++ +||||+++++++...+.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 357889999999999999998741 355899998865432 25688999999999 79999999999999999
Q ss_pred eEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEeccccccc
Q 001873 835 KLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARI 914 (1001)
Q Consensus 835 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~ 914 (1001)
.++||||+++|+|.+++++.....+++.++..++.|++.|++|||++ +|+|+||||+||+++.++.+|++|||.++.
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~ 190 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGLARD 190 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCccccc
Confidence 99999999999999999865444579999999999999999999998 999999999999999999999999999986
Q ss_pred ccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 915 VSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
....... .......++..|+|||.+....++.++||||+||++|||++ |+.||....
T Consensus 191 ~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~ 248 (302)
T cd05055 191 IMNDSNY-----VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMP 248 (302)
T ss_pred ccCCCce-----eecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCC
Confidence 5432211 01112346778999999988889999999999999999998 999987644
No 211
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.97 E-value=8.1e-30 Score=279.03 Aligned_cols=201 Identities=26% Similarity=0.402 Sum_probs=167.7
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCC----EEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCceEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGE----TLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLL 837 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~l 837 (1001)
++|+..++||+|+||+||+|++. +++ +||+|.+..... .+++.+|+.+++.++||||+++++++... ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~l 85 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQL 85 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcEE
Confidence 46888899999999999999853 444 489998864432 35788999999999999999999998754 4678
Q ss_pred EEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccC
Q 001873 838 FYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSG 917 (1001)
Q Consensus 838 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~ 917 (1001)
++||+++|+|.+++++. ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++.+..
T Consensus 86 ~~~~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~ 161 (279)
T cd05109 86 VTQLMPYGCLLDYVREN-KDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLDI 161 (279)
T ss_pred EEEcCCCCCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceeeccc
Confidence 99999999999999764 34589999999999999999999998 999999999999999999999999999987643
Q ss_pred CCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 918 SGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 918 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
.... .......+++.|+|||...+..++.++|||||||++|||++ |..||+...
T Consensus 162 ~~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~ 216 (279)
T cd05109 162 DETE-----YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIP 216 (279)
T ss_pred ccce-----eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC
Confidence 2111 01111235678999999988899999999999999999998 999997643
No 212
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.97 E-value=9e-30 Score=277.07 Aligned_cols=197 Identities=25% Similarity=0.335 Sum_probs=161.5
Q ss_pred CeEeecCCeeEEEEEeC---CCCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCCC
Q 001873 772 NVIGTGSSGVVYRVTIP---NGETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNG 845 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 845 (1001)
+.||+|+||.||+|+.. .+..+|+|++..... ...+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 36899999999999864 346799998865432 246888999999999999999999999989999999999999
Q ss_pred CHHHHhhcCCC---CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCC
Q 001873 846 SLSSLLHGAGK---GGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922 (1001)
Q Consensus 846 sL~~~l~~~~~---~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~ 922 (1001)
+|.+++++... ...++..+..++.|++.|++|||+. +++||||||+||+++.++++|++|||.++.......
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~-- 155 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY-- 155 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcce--
Confidence 99999975322 2356778888999999999999998 999999999999999999999999999875432111
Q ss_pred CCCCCCCCcccccccccCccccccC-------CCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 923 CSKTNQRPQLAGSYGYMAPEHASMQ-------RITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 923 ~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
........|+..|+|||++... .++.++||||||+++|||++ |+.||....
T Consensus 156 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~ 214 (269)
T cd05087 156 ---YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLS 214 (269)
T ss_pred ---eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCC
Confidence 1112234578899999987532 35789999999999999996 999997543
No 213
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.97 E-value=9.8e-30 Score=279.32 Aligned_cols=199 Identities=26% Similarity=0.325 Sum_probs=169.1
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
+|++.+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4788899999999999999875 68999999885432 235688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCC-CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCC
Q 001873 842 LPNGSLSSLLHGAGK-GGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGD 920 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~-~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~ 920 (1001)
++ ++|.+++..... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 155 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV- 155 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCc-
Confidence 97 689988875432 5578999999999999999999998 99999999999999999999999999987543211
Q ss_pred CCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 921 DNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 921 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
.......+++.|+|||++.+ ..++.++||||+|+++|||+||+.||.+..
T Consensus 156 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~ 206 (285)
T cd07861 156 ------RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDS 206 (285)
T ss_pred ------ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence 11122357889999998765 457889999999999999999999998653
No 214
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.97 E-value=1.2e-29 Score=274.05 Aligned_cols=199 Identities=29% Similarity=0.369 Sum_probs=171.6
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeec-CCceEEEEE
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSN-KNLKLLFYD 840 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~-~~~~~lv~e 840 (1001)
.|++.+.||+|+||.||+++.+ +++.||+|++.... ..+.+.+|++++++++|+|++++++.+.. +...++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4788999999999999999865 57899999985432 23568889999999999999999998764 446789999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCC
Q 001873 841 YLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGD 920 (1001)
Q Consensus 841 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~ 920 (1001)
|+++++|.+++.......+++.++..++.|++.|++|+|+. +++||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~- 156 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC- 156 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEecccC-
Confidence 99999999999875455689999999999999999999998 99999999999999999999999999998764321
Q ss_pred CCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 921 DNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 921 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.......|++.|+|||+..+..++.++||||+|+++|++++|+.||+..
T Consensus 157 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~ 205 (257)
T cd08223 157 ------DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAK 205 (257)
T ss_pred ------CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence 1223346889999999999889999999999999999999999999754
No 215
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=5.6e-31 Score=294.48 Aligned_cols=199 Identities=27% Similarity=0.433 Sum_probs=169.4
Q ss_pred ccCCCeEeecCCeeEEEEEe-CCC----CEEEEEEecCC---CchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 768 LTSANVIGTGSSGVVYRVTI-PNG----ETLAVKKMWSS---DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 768 ~~~~~~lG~G~fg~Vy~~~~-~~~----~~vavK~~~~~---~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
.+..++||+|+||+||+|.| +.| -+||+|++... ....++.+|+..|.+++|||+++++|+|..+. ..||+
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvt 776 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVT 776 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHH
Confidence 34567899999999999885 333 46888887443 23478999999999999999999999998766 68999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
+||+.|.|.+|++.+ +..+..+..+.|..|||+||.|||.+ ++|||||..+|||+.+-.++||+|||+|+...++.
T Consensus 777 q~mP~G~LlDyvr~h-r~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~ 852 (1177)
T KOG1025|consen 777 QLMPLGCLLDYVREH-RDNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDE 852 (1177)
T ss_pred HhcccchHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccCccc
Confidence 999999999999976 34577788899999999999999998 99999999999999999999999999999887664
Q ss_pred CCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
....... ..-.+.|||-|.+..+.|+.++|||||||++||++| |..|+++..
T Consensus 853 ~ey~~~~-----gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~ 905 (1177)
T KOG1025|consen 853 KEYSAPG-----GKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIP 905 (1177)
T ss_pred ccccccc-----cccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCC
Confidence 4332221 123467999999999999999999999999999998 999998764
No 216
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.97 E-value=1.1e-29 Score=273.47 Aligned_cols=196 Identities=24% Similarity=0.355 Sum_probs=165.2
Q ss_pred CeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCCCCH
Q 001873 772 NVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSL 847 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 847 (1001)
+.||+|+||.||+|+.. +++.||+|.+..... ...+.+|++++++++||||+++++++......++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 36899999999999875 689999998754332 35688999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCCCCC
Q 001873 848 SSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927 (1001)
Q Consensus 848 ~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~~~ 927 (1001)
.+++... ...+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+|++|||.+......... .
T Consensus 81 ~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~-----~ 151 (252)
T cd05084 81 LTFLRTE-GPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYA-----S 151 (252)
T ss_pred HHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCccccccccc-----c
Confidence 9999754 23578999999999999999999998 9999999999999999999999999998764321110 0
Q ss_pred CCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 928 QRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 928 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
......++..|+|||.+.+..++.++||||+|+++|||++ |..||+...
T Consensus 152 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~ 201 (252)
T cd05084 152 TGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLS 201 (252)
T ss_pred cCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccC
Confidence 0111123457999999988889999999999999999998 999997543
No 217
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.97 E-value=1.3e-29 Score=273.65 Aligned_cols=195 Identities=24% Similarity=0.399 Sum_probs=162.1
Q ss_pred eEeecCCeeEEEEEeC---CCCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCCCC
Q 001873 773 VIGTGSSGVVYRVTIP---NGETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGS 846 (1001)
Q Consensus 773 ~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs 846 (1001)
.||+|+||.||+|.++ .+..||+|++..... .+.+.+|+.++++++||||+++++++.. +..++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCC
Confidence 3899999999999754 355799998865432 2568899999999999999999998864 56799999999999
Q ss_pred HHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCCCC
Q 001873 847 LSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKT 926 (1001)
Q Consensus 847 L~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~~ 926 (1001)
|.+++... ...+++..+.+++.|++.|++|||++ +++||||||+||+++.++.+||+|||+++.........
T Consensus 81 L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~---- 152 (257)
T cd05115 81 LNKFLSGK-KDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYY---- 152 (257)
T ss_pred HHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCccce----
Confidence 99999753 34579999999999999999999998 99999999999999999999999999998654322111
Q ss_pred CCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 927 NQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 927 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
.......++..|+|||.+....++.++|||||||++||+++ |+.||....
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 203 (257)
T cd05115 153 KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMK 203 (257)
T ss_pred eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCC
Confidence 11112234578999999988889999999999999999996 999997653
No 218
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.97 E-value=7.9e-31 Score=259.18 Aligned_cols=196 Identities=25% Similarity=0.415 Sum_probs=165.1
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCch---hhHHHHHHHhhccC-CCceeeEEeeeecCCceEEEEEc
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDES---GAFSSEIQTLGSIR-HKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~Ei~~l~~l~-h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
+.+.+..||.|+.|.||+++.+ .|..+|||.+...... +++...+.++.+.+ .|+||+.+|||..+...++.||.
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMel 172 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMEL 172 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHH
Confidence 3455677999999999999976 5899999999765544 56667777766654 89999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
|. ...+.++++. ...+++..+-++...+++|+.||..++ +|+|||+||+|||+|+.|++|+||||.+.++...
T Consensus 173 Ms-~C~ekLlkri-k~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS--- 245 (391)
T KOG0983|consen 173 MS-TCAEKLLKRI-KGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS--- 245 (391)
T ss_pred HH-HHHHHHHHHh-cCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeecc---
Confidence 94 5666666654 345788888899999999999999986 9999999999999999999999999999877432
Q ss_pred CCCCCCCCCcccccccccCcccccc---CCCCCccchHHHHHHHHHHHhCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASM---QRITEKSDVYSFGVVLLEVLTGRHPLDP 974 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~SlG~il~elltg~~Pf~~ 974 (1001)
...+...|-+.|||||.+.. ..|+.++||||||+.++|+.||+.||.+
T Consensus 246 -----kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~ 296 (391)
T KOG0983|consen 246 -----KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKG 296 (391)
T ss_pred -----cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCC
Confidence 23344578999999998853 5789999999999999999999999987
No 219
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.97 E-value=1.4e-29 Score=279.00 Aligned_cols=199 Identities=27% Similarity=0.357 Sum_probs=170.4
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc--hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEcc
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE--SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYL 842 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 842 (1001)
+.|++.+.||+|+||.||+|+.. +++.||+|.+..... .+.+.+|+.+++.++||||+++++++..++..++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 56889999999999999999975 588999999865432 367888999999999999999999999899999999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCC
Q 001873 843 PNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922 (1001)
Q Consensus 843 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~ 922 (1001)
++++|..++.+. ...+++..+..++.|++.|++|||+. +++||||||+||+++.++++||+|||.+......
T Consensus 92 ~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~---- 163 (292)
T cd06644 92 PGGAVDAIMLEL-DRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT---- 163 (292)
T ss_pred CCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceecccc----
Confidence 999999888654 24578999999999999999999998 9999999999999999999999999988754221
Q ss_pred CCCCCCCCcccccccccCccccc-----cCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 923 CSKTNQRPQLAGSYGYMAPEHAS-----MQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 923 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
........+++.|+|||++. ...++.++|||||||++|||++|+.||...
T Consensus 164 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~ 218 (292)
T cd06644 164 ---LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL 218 (292)
T ss_pred ---ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccc
Confidence 11122346888999999874 355778999999999999999999999754
No 220
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.97 E-value=1.6e-29 Score=271.95 Aligned_cols=195 Identities=26% Similarity=0.389 Sum_probs=166.6
Q ss_pred CeEeecCCeeEEEEEeCCCCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCCCCHH
Q 001873 772 NVIGTGSSGVVYRVTIPNGETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLS 848 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 848 (1001)
++||+|+||.||+|..++++.||+|.+..... ...+.+|++++++++||||+++++++...+..++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 36899999999999988889999998865432 246889999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCCCCCC
Q 001873 849 SLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQ 928 (1001)
Q Consensus 849 ~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~~~~ 928 (1001)
+++.... ..+++..+.+++.|++.|+.|+|+. +++||||||+||+++.++.+|++|||++........ ..
T Consensus 81 ~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~------~~ 150 (250)
T cd05085 81 SFLRKKK-DELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY------SS 150 (250)
T ss_pred HHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceecccccc------cc
Confidence 9987542 3478999999999999999999998 999999999999999999999999999875432111 01
Q ss_pred CCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 929 RPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 929 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
.....++..|+|||++....++.++||||||+++||+++ |..||.+..
T Consensus 151 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~ 199 (250)
T cd05085 151 SGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMT 199 (250)
T ss_pred CCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 111234568999999988889999999999999999998 999997653
No 221
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=1.1e-29 Score=280.13 Aligned_cols=200 Identities=26% Similarity=0.412 Sum_probs=174.7
Q ss_pred HHhcccCCCeEeecCCeeEEEEEe-CCCCEEEEEEecCCC--chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEE
Q 001873 764 VVRNLTSANVIGTGSSGVVYRVTI-PNGETLAVKKMWSSD--ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYD 840 (1001)
Q Consensus 764 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e 840 (1001)
..++|+..+.||.|+||.||+|.. .+++.||+|.+.... ..+.+.+|+.+++.++||||+++++++...+..++|+|
T Consensus 17 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 96 (296)
T cd06655 17 PKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVME 96 (296)
T ss_pred CcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEE
Confidence 346799999999999999999985 478999999885433 33678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCC
Q 001873 841 YLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGD 920 (1001)
Q Consensus 841 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~ 920 (1001)
|+++++|.+++.+ ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 97 ~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 170 (296)
T cd06655 97 YLAGGSLTDVVTE---TCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS 170 (296)
T ss_pred ecCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhcccccc
Confidence 9999999999874 3478999999999999999999998 999999999999999999999999999876543211
Q ss_pred CCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 921 DNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 921 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
......|++.|+|||.+....++.++|||||||++|++++|+.||....
T Consensus 171 -------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~ 219 (296)
T cd06655 171 -------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN 219 (296)
T ss_pred -------cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 1123468899999999988889999999999999999999999997654
No 222
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=1.1e-29 Score=281.52 Aligned_cols=203 Identities=29% Similarity=0.392 Sum_probs=170.2
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC--------CCCEEEEEEecCCC---chhhHHHHHHHhhcc-CCCceeeEEeeeecC
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP--------NGETLAVKKMWSSD---ESGAFSSEIQTLGSI-RHKNIVRLLGWGSNK 832 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~~~~~~---~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~ 832 (1001)
.++|++.+.||+|+||.||+|+.. ++..||+|.+.... ..+.+.+|+.+++.+ +||||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 457889999999999999998741 24579999886432 235788999999999 899999999999999
Q ss_pred CceEEEEEccCCCCHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEE
Q 001873 833 NLKLLFYDYLPNGSLSSLLHGAG--------------KGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLL 898 (1001)
Q Consensus 833 ~~~~lv~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll 898 (1001)
+..++||||+++|+|.+++.+.. ...+++.++..++.|++.|+.|||+. +|+||||||+||++
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nili 170 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNVLV 170 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceEEE
Confidence 99999999999999999997642 13467888999999999999999998 99999999999999
Q ss_pred CCCCcEEEecccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 899 GPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 899 ~~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
++++.+||+|||.++.+...... .......+++.|+|||++.+..++.++||||||+++|||++ |..||...
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 243 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYY-----KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 243 (304)
T ss_pred cCCCcEEECCCccceeccccccc-----ccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC
Confidence 99999999999999876432211 11122245678999999988889999999999999999998 88888654
No 223
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.97 E-value=8e-30 Score=278.72 Aligned_cols=203 Identities=27% Similarity=0.365 Sum_probs=168.9
Q ss_pred hcccCCCeEeecCCeeEEEEEeCC------CCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCceE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIPN------GETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKL 836 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~ 836 (1001)
++|++.+.||+|+||.||+|.+.+ +..||+|.+..... ...+.+|+.++++++|+||+++++++.+.+..+
T Consensus 6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05036 6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRF 85 (277)
T ss_pred HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcE
Confidence 568889999999999999998753 56789998754332 246889999999999999999999999888999
Q ss_pred EEEEccCCCCHHHHhhcCCC-----CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCC---cEEEec
Q 001873 837 LFYDYLPNGSLSSLLHGAGK-----GGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGY---QAYLAD 908 (1001)
Q Consensus 837 lv~e~~~~gsL~~~l~~~~~-----~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~---~~ki~D 908 (1001)
+||||+++++|.++++..+. ..+++..+.+++.||+.|++|||+. +++||||||+||+++.++ .+|++|
T Consensus 86 lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl~d 162 (277)
T cd05036 86 ILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKIAD 162 (277)
T ss_pred EEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEecc
Confidence 99999999999999976432 2478999999999999999999998 999999999999998654 699999
Q ss_pred ccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 909 FGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 909 fgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
||+++.+...... .......++..|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 163 fg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~ 226 (277)
T cd05036 163 FGMARDIYRASYY-----RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRT 226 (277)
T ss_pred CccccccCCccce-----ecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC
Confidence 9999876322110 01111234568999999988899999999999999999997 999998654
No 224
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.97 E-value=9.5e-30 Score=290.13 Aligned_cols=203 Identities=29% Similarity=0.387 Sum_probs=169.6
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC------CCCEEEEEEecCCCc---hhhHHHHHHHhhccC-CCceeeEEeeeecCCc
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP------NGETLAVKKMWSSDE---SGAFSSEIQTLGSIR-HKNIVRLLGWGSNKNL 834 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~-h~nIv~l~~~~~~~~~ 834 (1001)
.++|.+.+.||+|+||.||+|+++ .++.||||++..... .+.+.+|+.++.++. ||||+++++++...+.
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~ 115 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGP 115 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCC
Confidence 356788899999999999999853 346899999965432 246889999999997 9999999999999999
Q ss_pred eEEEEEccCCCCHHHHhhcCCC----------------------------------------------------------
Q 001873 835 KLLFYDYLPNGSLSSLLHGAGK---------------------------------------------------------- 856 (1001)
Q Consensus 835 ~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 856 (1001)
.++||||+++|+|.+++++.+.
T Consensus 116 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (401)
T cd05107 116 IYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDM 195 (401)
T ss_pred cEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcc
Confidence 9999999999999999975321
Q ss_pred --------------------------------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEE
Q 001873 857 --------------------------------------GGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLL 898 (1001)
Q Consensus 857 --------------------------------------~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll 898 (1001)
..+++..+.+++.|++.|++|||+. +|+||||||+||++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~NiLl 272 (401)
T cd05107 196 KGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNVLI 272 (401)
T ss_pred hhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcceEEE
Confidence 1346677888999999999999998 99999999999999
Q ss_pred CCCCcEEEecccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 899 GPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 899 ~~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
++++.+|++|||+++.+...... .......+++.|+|||.+....++.++|||||||++|||++ |+.||...
T Consensus 273 ~~~~~~kL~DfGla~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~ 345 (401)
T cd05107 273 CEGKLVKICDFGLARDIMRDSNY-----ISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPEL 345 (401)
T ss_pred eCCCEEEEEecCcceeccccccc-----ccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCC
Confidence 99999999999999865322111 11122357889999999988889999999999999999998 89998754
No 225
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.97 E-value=9.5e-30 Score=279.80 Aligned_cols=203 Identities=25% Similarity=0.371 Sum_probs=169.1
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC------CCCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCce
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP------NGETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLK 835 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~ 835 (1001)
.++|++.++||+|+||.||+|..+ .+..||+|.+..... ..++.+|+.++++++||||+++++++.+....
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPT 84 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence 467999999999999999998753 245899998764432 24578899999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHhhcCCC--------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEe
Q 001873 836 LLFYDYLPNGSLSSLLHGAGK--------GGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLA 907 (1001)
Q Consensus 836 ~lv~e~~~~gsL~~~l~~~~~--------~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~ 907 (1001)
++||||+++|+|.+++++.+. ...++..+.+++.|++.|+.|||++ +|+||||||+||++++++.+|++
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~L~ 161 (288)
T cd05061 85 LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIG 161 (288)
T ss_pred EEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEEEC
Confidence 999999999999999975321 2346677889999999999999998 99999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 908 DFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 908 Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
|||+++........ .......++..|+|||.+.+..++.++|||||||++|||++ |+.||.+.
T Consensus 162 Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~ 225 (288)
T cd05061 162 DFGMTRDIYETDYY-----RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL 225 (288)
T ss_pred cCCccccccccccc-----cccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999865432211 11112245678999999988899999999999999999998 78898754
No 226
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.97 E-value=9.8e-30 Score=278.04 Aligned_cols=203 Identities=26% Similarity=0.375 Sum_probs=171.5
Q ss_pred HhcccCCCeEeecCCeeEEEEEeCC------CCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCce
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIPN------GETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLK 835 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~ 835 (1001)
.++|++.+.||+|+||.||+|...+ +..||+|.+..... ...+.+|+.+++.++||||+++++++......
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 3578889999999999999988642 46899999864432 24688999999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHhhcCCC--------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEe
Q 001873 836 LLFYDYLPNGSLSSLLHGAGK--------GGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLA 907 (1001)
Q Consensus 836 ~lv~e~~~~gsL~~~l~~~~~--------~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~ 907 (1001)
++||||+++|+|.+++..... ..+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEEC
Confidence 999999999999999975321 2367888999999999999999998 99999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 908 DFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 908 Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
|||+++.+...... .......++..|+|||.+....++.++|||||||++||++| |+.||...
T Consensus 162 dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 225 (277)
T cd05032 162 DFGMTRDIYETDYY-----RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGL 225 (277)
T ss_pred CcccchhhccCccc-----ccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccC
Confidence 99999865432211 11223356789999999988889999999999999999998 99998654
No 227
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.97 E-value=1.2e-29 Score=275.70 Aligned_cols=203 Identities=26% Similarity=0.412 Sum_probs=170.9
Q ss_pred hcccCCCeEeecCCeeEEEEEeC----CCCEEEEEEecCCC---chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP----NGETLAVKKMWSSD---ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLF 838 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~---~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv 838 (1001)
.+|++.+.||+|+||.||+|+.. .+..||+|.+.... ..+.+.+|+.++++++||||+++++++..++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 46888999999999999999863 23479999886433 235788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCC
Q 001873 839 YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGS 918 (1001)
Q Consensus 839 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~ 918 (1001)
|||+++++|.+++.... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.++++|||++..+...
T Consensus 84 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd05066 84 TEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 159 (267)
T ss_pred EEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCcccccccc
Confidence 99999999999997643 3578999999999999999999998 9999999999999999999999999999876432
Q ss_pred CCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 919 GDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 919 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
.... .......++..|+|||.+.+..++.++|+||||+++||+++ |+.||....
T Consensus 160 ~~~~----~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~ 214 (267)
T cd05066 160 PEAA----YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMS 214 (267)
T ss_pred ccee----eecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCC
Confidence 2111 01111234568999999998899999999999999999887 999997653
No 228
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.97 E-value=6e-30 Score=283.36 Aligned_cols=199 Identities=29% Similarity=0.459 Sum_probs=166.2
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCC--EEEEEEecCCC---chhhHHHHHHHhhcc-CCCceeeEEeeeecCCceEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGE--TLAVKKMWSSD---ESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLF 838 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~--~vavK~~~~~~---~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~~~~~lv 838 (1001)
.+|++.+.||+|+||.||+|+++ ++. .+|+|++.... ..+.+.+|++++.++ +||||+++++++...+..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 46888899999999999999865 344 46777765432 235788999999999 899999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCC--------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcE
Q 001873 839 YDYLPNGSLSSLLHGAGK--------------GGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQA 904 (1001)
Q Consensus 839 ~e~~~~gsL~~~l~~~~~--------------~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 904 (1001)
|||+++|+|.+++++.+. ..+++.+++.++.|++.|++|||+. +|+||||||+||++++++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCCcE
Confidence 999999999999975421 2468899999999999999999998 99999999999999999999
Q ss_pred EEecccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 905 YLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 905 ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
||+|||+++..... .......++..|+|||++....++.++|||||||++|||+| |..||...
T Consensus 164 kl~dfg~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 227 (303)
T cd05088 164 KIADFGLSRGQEVY--------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM 227 (303)
T ss_pred EeCccccCcccchh--------hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccC
Confidence 99999998642110 01111234567999999988889999999999999999998 99999754
No 229
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=1e-29 Score=282.26 Aligned_cols=203 Identities=28% Similarity=0.374 Sum_probs=169.4
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC--------CCCEEEEEEecCCC---chhhHHHHHHHhhcc-CCCceeeEEeeeecC
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP--------NGETLAVKKMWSSD---ESGAFSSEIQTLGSI-RHKNIVRLLGWGSNK 832 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~~~~~~---~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~ 832 (1001)
.++|.+.+.||+|+||.||+++.. +...||+|.+.... ...++.+|+.+++++ +||||+++++++...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 357999999999999999998752 23579999986543 224688899999999 799999999999999
Q ss_pred CceEEEEEccCCCCHHHHhhcCCC--------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEE
Q 001873 833 NLKLLFYDYLPNGSLSSLLHGAGK--------------GGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLL 898 (1001)
Q Consensus 833 ~~~~lv~e~~~~gsL~~~l~~~~~--------------~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll 898 (1001)
+..++||||+++|+|.+++..... ..+++.++.+++.|++.|++|||+. +++||||||+||++
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill 173 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV 173 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheEE
Confidence 999999999999999999976422 2478899999999999999999998 99999999999999
Q ss_pred CCCCcEEEecccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 899 GPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 899 ~~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
+.++.+||+|||.++........ .......+++.|+|||++.+..++.++||||+||++|||++ |+.||...
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~ 246 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHIDYY-----KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 246 (307)
T ss_pred cCCCcEEECCCcccccccccchh-----hccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcC
Confidence 99999999999998765321110 01111234568999999988889999999999999999998 88888654
No 230
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=7.9e-31 Score=288.43 Aligned_cols=202 Identities=26% Similarity=0.399 Sum_probs=172.7
Q ss_pred cccCCCeEeecCCeeEEEEEeCC--C--CEEEEEEecCCC---chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 767 NLTSANVIGTGSSGVVYRVTIPN--G--ETLAVKKMWSSD---ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~~--~--~~vavK~~~~~~---~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
+.+..++||+|+||.|++|.|.. | -.||||.+.... ...+|.+|+.+|.+++|||++++||+..+ ....+||
T Consensus 111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ 189 (1039)
T KOG0199|consen 111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVF 189 (1039)
T ss_pred HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHh
Confidence 34556789999999999999752 3 469999986543 44789999999999999999999999887 5678999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
|.++.|+|.+.+++.....+-......++.|||.||.||.++ +.||||+..+|+++-....|||+|||+.+-+....
T Consensus 190 ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ne 266 (1039)
T KOG0199|consen 190 ELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGENE 266 (1039)
T ss_pred hhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCCCC
Confidence 999999999999985566677788889999999999999999 99999999999999999999999999999887655
Q ss_pred CCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
+.+..... ..-...|+|||.+..+.++.++|||+|||++|||+| |+.||-+-.
T Consensus 267 d~Yvm~p~----rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~ 320 (1039)
T KOG0199|consen 267 DMYVMAPQ----RKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCR 320 (1039)
T ss_pred cceEecCC----CcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCC
Confidence 44322222 223457999999999999999999999999999998 899997653
No 231
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.97 E-value=9.7e-30 Score=276.82 Aligned_cols=196 Identities=24% Similarity=0.330 Sum_probs=159.3
Q ss_pred CeEeecCCeeEEEEEeCC---CCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCCC
Q 001873 772 NVIGTGSSGVVYRVTIPN---GETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNG 845 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~~---~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 845 (1001)
+.||+|+||+||+|+..+ ...||+|.+..... ...+.+|+..++.++||||+++++++......++||||+++|
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 358999999999997543 45788887754322 246889999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCC---CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCC
Q 001873 846 SLSSLLHGAGK---GGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922 (1001)
Q Consensus 846 sL~~~l~~~~~---~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~ 922 (1001)
+|.+++..... ...++.....++.|++.|++|||+. +|+||||||+||++++++++||+|||+++.........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 157 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI 157 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchhee
Confidence 99999976432 2246778889999999999999998 99999999999999999999999999987543221110
Q ss_pred CCCCCCCCcccccccccCcccccc-------CCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 923 CSKTNQRPQLAGSYGYMAPEHASM-------QRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 923 ~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
......+++.|+|||+... ..++.++||||+||++|||++ |+.||...
T Consensus 158 -----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~ 213 (269)
T cd05042 158 -----TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDL 213 (269)
T ss_pred -----ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcC
Confidence 1122346778999998643 456789999999999999999 78888654
No 232
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.97 E-value=1.4e-29 Score=275.15 Aligned_cols=200 Identities=26% Similarity=0.352 Sum_probs=173.5
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC-----CchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS-----DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
++|++.+.||+|+||.||+|... +++.||+|.++.. ...+.+.+|++++++++|++|+++++++.+.+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 47889999999999999999976 7899999987532 12467889999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccC
Q 001873 840 DYLPNGSLSSLLHGA--GKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSG 917 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~ 917 (1001)
||+++|+|.+++... ....+++..+..++.|+++|+.|||+. +|+||||||+||+++.++.++|+|||.+.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 999999999998653 234478899999999999999999998 999999999999999999999999999876532
Q ss_pred CCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 918 SGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 918 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.. .......|++.|+|||.+.+..++.++||||+||++|+|++|+.||...
T Consensus 159 ~~-------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 209 (267)
T cd08224 159 KT-------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD 209 (267)
T ss_pred CC-------cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccC
Confidence 21 1122346888999999998888999999999999999999999999654
No 233
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.97 E-value=9.4e-30 Score=278.57 Aligned_cols=202 Identities=26% Similarity=0.455 Sum_probs=170.4
Q ss_pred hcccCCCeEeecCCeeEEEEEeC------CCCEEEEEEecCCCc--hhhHHHHHHHhhccCCCceeeEEeeeecCCceEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP------NGETLAVKKMWSSDE--SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLL 837 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~--~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~l 837 (1001)
++|...++||+|+||.||+++.. ++..||+|.+..... .+.+.+|++++++++|+||+++++++.+.+..++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 56778899999999999998632 356899998764432 3679999999999999999999999999999999
Q ss_pred EEEccCCCCHHHHhhcCCC-------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcE
Q 001873 838 FYDYLPNGSLSSLLHGAGK-------------GGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQA 904 (1001)
Q Consensus 838 v~e~~~~gsL~~~l~~~~~-------------~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 904 (1001)
||||+++++|.+++...+. ..+++..+..++.|++.|++|||+. +++||||||+||++++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCCCE
Confidence 9999999999999976432 2468899999999999999999998 99999999999999999999
Q ss_pred EEecccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 905 YLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 905 ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
||+|||++..+...... .......+++.|+|||.+.+..++.++|||||||++|||++ |+.||...
T Consensus 162 kL~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~ 228 (280)
T cd05092 162 KIGDFGMSRDIYSTDYY-----RVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQL 228 (280)
T ss_pred EECCCCceeEcCCCcee-----ecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccC
Confidence 99999999765322110 11122345688999999998899999999999999999998 99999654
No 234
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.97 E-value=9.4e-30 Score=281.09 Aligned_cols=200 Identities=30% Similarity=0.433 Sum_probs=166.5
Q ss_pred hcccCCCeEeecCCeeEEEEEeCC-C--CEEEEEEecCCC---chhhHHHHHHHhhcc-CCCceeeEEeeeecCCceEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIPN-G--ETLAVKKMWSSD---ESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLF 838 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~~-~--~~vavK~~~~~~---~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~~~~~lv 838 (1001)
++|++.+.||+|+||+||+|..++ + ..+|+|.++... ..+.+.+|+.+++++ +||||+++++++...+..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 578899999999999999998653 3 347888876422 235688999999999 799999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCC--------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcE
Q 001873 839 YDYLPNGSLSSLLHGAGK--------------GGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQA 904 (1001)
Q Consensus 839 ~e~~~~gsL~~~l~~~~~--------------~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 904 (1001)
|||+++++|.++++.... ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCeE
Confidence 999999999999975321 2468889999999999999999998 99999999999999999999
Q ss_pred EEecccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 905 YLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 905 ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
||+|||++....... .......+..|+|||+.....++.++|||||||++|||++ |+.||....
T Consensus 159 kl~dfg~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~ 223 (297)
T cd05089 159 KIADFGLSRGEEVYV--------KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMT 223 (297)
T ss_pred EECCcCCCcccccee--------ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC
Confidence 999999986421110 0111123457999999988889999999999999999997 999997654
No 235
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=7.1e-30 Score=289.09 Aligned_cols=190 Identities=23% Similarity=0.303 Sum_probs=163.4
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCC
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPN 844 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 844 (1001)
..|++.+.||+|+||.||+|+.. +++.||+|.... .....|+.++++++||||+++++++......++||||+.
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~- 140 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK----GTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS- 140 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc----cccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC-
Confidence 46999999999999999999975 578899997532 234579999999999999999999999999999999995
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCC
Q 001873 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924 (1001)
Q Consensus 845 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~ 924 (1001)
++|.+++... ...+++..+..++.||+.|+.|||++ +|+||||||+||+++.++.+||+|||.++.....
T Consensus 141 ~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~------ 210 (357)
T PHA03209 141 SDLYTYLTKR-SRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA------ 210 (357)
T ss_pred CcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccccccC------
Confidence 6898888654 34589999999999999999999998 9999999999999999999999999998753211
Q ss_pred CCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCC
Q 001873 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972 (1001)
Q Consensus 925 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf 972 (1001)
.......||+.|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 211 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 211 --PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred --cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 1122346899999999999999999999999999999999865554
No 236
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.97 E-value=1.7e-29 Score=275.50 Aligned_cols=200 Identities=24% Similarity=0.357 Sum_probs=166.0
Q ss_pred ccCCCeEeecCCeeEEEEEeCC----CCEEEEEEecCCCc----hhhHHHHHHHhhccCCCceeeEEeeeecCCc-----
Q 001873 768 LTSANVIGTGSSGVVYRVTIPN----GETLAVKKMWSSDE----SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNL----- 834 (1001)
Q Consensus 768 ~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~----~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~----- 834 (1001)
|++.+.||+|+||.||+|+... +..||||++..+.. ...+.+|+..++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 5678899999999999998642 47899999865432 2568899999999999999999998765443
Q ss_pred -eEEEEEccCCCCHHHHhhcC----CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecc
Q 001873 835 -KLLFYDYLPNGSLSSLLHGA----GKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADF 909 (1001)
Q Consensus 835 -~~lv~e~~~~gsL~~~l~~~----~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Df 909 (1001)
.++||||+++|+|..++... ....+++..+..++.|++.|++|||++ +|+||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCc
Confidence 68999999999999998543 223578999999999999999999998 9999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 910 GLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 910 gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
|+++.+....... ......++..|+|||.+....++.++|||||||++|||++ |..||...
T Consensus 158 g~~~~~~~~~~~~-----~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~ 219 (273)
T cd05035 158 GLSKKIYSGDYYR-----QGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGV 219 (273)
T ss_pred cceeecccccccc-----ccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCC
Confidence 9998764332211 1111235678999999988899999999999999999999 88998654
No 237
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=2.9e-30 Score=280.69 Aligned_cols=219 Identities=25% Similarity=0.375 Sum_probs=181.6
Q ss_pred ccCCCeEeecCCeeEEEEE-eCCCCEEEEEEecCCCc-----hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 768 LTSANVIGTGSSGVVYRVT-IPNGETLAVKKMWSSDE-----SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 768 ~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~-----~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
|..++.||-|+||+|.+++ ..+...||+|.+.+.+. ......|-.||+..+.+-||+++-.|.+++.+|+||||
T Consensus 631 Fvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdY 710 (1034)
T KOG0608|consen 631 FVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDY 710 (1034)
T ss_pred eEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEec
Confidence 5567789999999999987 44577899998865443 24467789999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
++||++..++-+. ..+.+..++-++.++.+|+++.|.. |+|||||||+|||||.+|++|++|||++.-+....+.
T Consensus 711 IPGGDmMSLLIrm--gIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHds 785 (1034)
T KOG0608|consen 711 IPGGDMMSLLIRM--GIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 785 (1034)
T ss_pred cCCccHHHHHHHh--ccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccccccceecccc
Confidence 9999999998764 3478888888899999999999998 9999999999999999999999999998644221111
Q ss_pred CCCCC-----------------------------------CCCCcccccccccCccccccCCCCCccchHHHHHHHHHHH
Q 001873 922 NCSKT-----------------------------------NQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVL 966 (1001)
Q Consensus 922 ~~~~~-----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ell 966 (1001)
..... ......+||+.|+|||++....|+..+|-||.|||+|||+
T Consensus 786 kYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~ 865 (1034)
T KOG0608|consen 786 KYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEML 865 (1034)
T ss_pred ccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHh
Confidence 00000 0123467999999999999999999999999999999999
Q ss_pred hCCCCCCCCCCCC--cCcccchhhhhc
Q 001873 967 TGRHPLDPTLPGG--APLVQWTPLMFL 991 (1001)
Q Consensus 967 tg~~Pf~~~~~~~--~~l~~~~~~~~~ 991 (1001)
.|+.||-..++++ ..+..|....+.
T Consensus 866 ~g~~pf~~~tp~~tq~kv~nw~~~l~~ 892 (1034)
T KOG0608|consen 866 VGQPPFLADTPGETQYKVINWRNFLHI 892 (1034)
T ss_pred hCCCCccCCCCCcceeeeeehhhcccc
Confidence 9999999888776 467788876543
No 238
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.97 E-value=8.2e-30 Score=279.13 Aligned_cols=199 Identities=27% Similarity=0.340 Sum_probs=171.6
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc--hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEcc
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE--SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYL 842 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 842 (1001)
++|++.+.||+|+||.||+|+.. +++.||+|.+..... .+.+.+|+.++++++||||+++++++..+...++||||+
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFC 84 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeecc
Confidence 46888899999999999999875 689999998865432 357889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCC
Q 001873 843 PNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922 (1001)
Q Consensus 843 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~ 922 (1001)
++++|.+++.+.+ ..+++..+..++.|++.|+.|||++ +|+||||||+||+++.++.++|+|||.+.......
T Consensus 85 ~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~--- 157 (280)
T cd06611 85 DGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL--- 157 (280)
T ss_pred CCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhcccc---
Confidence 9999999987642 3589999999999999999999998 99999999999999999999999999887643211
Q ss_pred CCCCCCCCcccccccccCccccc-----cCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 923 CSKTNQRPQLAGSYGYMAPEHAS-----MQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 923 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.......|++.|+|||.+. ...++.++||||+|+++|||++|+.||...
T Consensus 158 ----~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~ 211 (280)
T cd06611 158 ----QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHEL 211 (280)
T ss_pred ----cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccC
Confidence 1122346889999999874 345778999999999999999999999764
No 239
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=9.1e-30 Score=279.74 Aligned_cols=199 Identities=29% Similarity=0.414 Sum_probs=169.9
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
++|++.+.||+|+||.||+++.. +++.||+|.+..... ...+.+|+.++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 36888999999999999999976 789999998864322 35788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCC
Q 001873 842 LPNGSLSSLLHGAG-KGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGD 920 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~-~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~ 920 (1001)
+++++|.++++... ...+++..+..++.|+++|+.|||+++ +|+||||||+||+++.++.+||+|||.+..+...
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-- 156 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS-- 156 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccCC--
Confidence 99999999987532 235799999999999999999999742 8999999999999999999999999998765321
Q ss_pred CCCCCCCCCCcccccccccCccccccC------CCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 921 DNCSKTNQRPQLAGSYGYMAPEHASMQ------RITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 921 ~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
......|++.|+|||.+.+. .++.++||||+||++|||++|+.||...
T Consensus 157 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 210 (286)
T cd06622 157 -------LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPE 210 (286)
T ss_pred -------ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCc
Confidence 11223578899999988543 3578999999999999999999999754
No 240
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.97 E-value=1.5e-29 Score=277.41 Aligned_cols=198 Identities=27% Similarity=0.337 Sum_probs=168.7
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC--chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccC
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD--ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLP 843 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~ 843 (1001)
.|++.+.||+|+||.||+|+.. ++..+|+|.+.... ..+.+.+|+++++.++||||+++++++..++..++||||++
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~ 85 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA 85 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecC
Confidence 3677889999999999999976 57788999875433 23578899999999999999999999999999999999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCC
Q 001873 844 NGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNC 923 (1001)
Q Consensus 844 ~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~ 923 (1001)
+++|..++.+. ...+++..+..++.|++.|+.|||+. +|+||||||+||+++.++++||+|||++.......
T Consensus 86 ~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~---- 157 (282)
T cd06643 86 GGAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI---- 157 (282)
T ss_pred CCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccccccc----
Confidence 99999988653 34589999999999999999999998 99999999999999999999999999987643211
Q ss_pred CCCCCCCcccccccccCccccc-----cCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 924 SKTNQRPQLAGSYGYMAPEHAS-----MQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 924 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.......|++.|+|||++. ...++.++||||+||++|||++|+.||...
T Consensus 158 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~ 211 (282)
T cd06643 158 ---QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHEL 211 (282)
T ss_pred ---cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCcccc
Confidence 1122346889999999873 455778999999999999999999999754
No 241
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=1.8e-30 Score=280.17 Aligned_cols=212 Identities=24% Similarity=0.374 Sum_probs=173.4
Q ss_pred hcccCCCeEeecCCeeEEEEEeCCCCEEEEEEecCCC----chhhHHHHHHHhhccC-CCceeeEEeeeecCCceEEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSD----ESGAFSSEIQTLGSIR-HKNIVRLLGWGSNKNLKLLFYD 840 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~-h~nIv~l~~~~~~~~~~~lv~e 840 (1001)
+.|++.+.||+||.++||++...+.+.||+|++.... ....|.+|+..+.+++ |.+||++++|-..++..|||||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 5688999999999999999998888999999874322 2367999999999995 9999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCC
Q 001873 841 YLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGD 920 (1001)
Q Consensus 841 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~ 920 (1001)
|=+ .+|.+++++.......| -++.+..||+.|+.++|.+ ||||.||||.|+++-. |.+||+|||.|..+.++..
T Consensus 441 ~Gd-~DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DTT 514 (677)
T KOG0596|consen 441 CGD-IDLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLVK-GRLKLIDFGIANAIQPDTT 514 (677)
T ss_pred ccc-ccHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEEe-eeEEeeeechhcccCcccc
Confidence 865 69999999765544445 5566889999999999999 9999999999999875 6999999999998866533
Q ss_pred CCCCCCCCCCcccccccccCccccccC-----------CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcCcccchhhh
Q 001873 921 DNCSKTNQRPQLAGSYGYMAPEHASMQ-----------RITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLM 989 (1001)
Q Consensus 921 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~Dv~SlG~il~elltg~~Pf~~~~~~~~~l~~~~~~~ 989 (1001)
. -.+...+||+.|||||.+... +.+.++||||+|||+|+|+.|+.||.... ..|.+..
T Consensus 515 s-----I~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~------n~~aKl~ 583 (677)
T KOG0596|consen 515 S-----IVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII------NQIAKLH 583 (677)
T ss_pred c-----eeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH------HHHHHHH
Confidence 2 223445899999999987432 25679999999999999999999997542 2455554
Q ss_pred hcccc
Q 001873 990 FLMLN 994 (1001)
Q Consensus 990 ~~~~~ 994 (1001)
..+.|
T Consensus 584 aI~~P 588 (677)
T KOG0596|consen 584 AITDP 588 (677)
T ss_pred hhcCC
Confidence 44443
No 242
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.97 E-value=1.2e-29 Score=279.30 Aligned_cols=202 Identities=29% Similarity=0.383 Sum_probs=168.7
Q ss_pred cccCCCeEeecCCeeEEEEEeC------CCCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCceEE
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP------NGETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLL 837 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~l 837 (1001)
+|++.+.||+|+||.||+|+.. ....||+|.+..... .+++.+|+.+++.++||||+++++.+..++..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4778899999999999999753 235788888765433 2568899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHhhcCC----------------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCC
Q 001873 838 FYDYLPNGSLSSLLHGAG----------------------KGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMN 895 (1001)
Q Consensus 838 v~e~~~~gsL~~~l~~~~----------------------~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~N 895 (1001)
||||+++|+|.+++.... ...+++..++.++.|++.|++|||+. +|+||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhhhe
Confidence 999999999999986421 12467889999999999999999998 99999999999
Q ss_pred eEECCCCcEEEecccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCC
Q 001873 896 VLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDP 974 (1001)
Q Consensus 896 Ill~~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~ 974 (1001)
|++++++.+||+|||+++........ .......++..|+|||...+..++.++||||||+++|||++ |+.||.+
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 232 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSY-----VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 232 (290)
T ss_pred EEEcCCCcEEeccccccccccCccch-----hcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999999999999999865432211 01122245678999999988889999999999999999999 9999976
Q ss_pred CC
Q 001873 975 TL 976 (1001)
Q Consensus 975 ~~ 976 (1001)
..
T Consensus 233 ~~ 234 (290)
T cd05045 233 IA 234 (290)
T ss_pred CC
Confidence 53
No 243
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=9.7e-31 Score=273.41 Aligned_cols=210 Identities=25% Similarity=0.360 Sum_probs=176.1
Q ss_pred HHhcccCCCeEeecCCeeEEEEEe-CCCCEEEEEEecCCC---------chhhHHHHHHHhhccCCCceeeEEeeee-cC
Q 001873 764 VVRNLTSANVIGTGSSGVVYRVTI-PNGETLAVKKMWSSD---------ESGAFSSEIQTLGSIRHKNIVRLLGWGS-NK 832 (1001)
Q Consensus 764 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---------~~~~~~~Ei~~l~~l~h~nIv~l~~~~~-~~ 832 (1001)
+-++|-....||+|+|++||++-+ ...+.||||+-.-.. -.+...+|.++-+.++||-||++++|+. +.
T Consensus 461 Ln~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt 540 (775)
T KOG1151|consen 461 LNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT 540 (775)
T ss_pred hHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence 346788888999999999999864 457889999652211 1134668999999999999999999885 56
Q ss_pred CceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEEC---CCCcEEEecc
Q 001873 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLG---PGYQAYLADF 909 (1001)
Q Consensus 833 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~---~~~~~ki~Df 909 (1001)
+.+|-|+|||+|.+|.-|++++ +.+++.+++.|+.||+.|+.||... .++|||-||||.|||+. .-|.+||+||
T Consensus 541 dsFCTVLEYceGNDLDFYLKQh--klmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDF 617 (775)
T KOG1151|consen 541 DSFCTVLEYCEGNDLDFYLKQH--KLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDF 617 (775)
T ss_pred ccceeeeeecCCCchhHHHHhh--hhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeec
Confidence 6789999999999999999875 4589999999999999999999985 57999999999999995 3478999999
Q ss_pred cccccccCCCCCCCCCCCCCCcccccccccCccccc----cCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 910 GLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHAS----MQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 910 gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
|+++++..+.+.............||.+|++||.+. ..+.+.|+||||+|||+|+.+.|+.||...-
T Consensus 618 GLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnq 688 (775)
T KOG1151|consen 618 GLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQ 688 (775)
T ss_pred chhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCch
Confidence 999999877665544555556678999999999763 2456789999999999999999999998764
No 244
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.97 E-value=8.6e-30 Score=279.44 Aligned_cols=201 Identities=23% Similarity=0.336 Sum_probs=168.4
Q ss_pred cccCCCeEeecCCeeEEEEEeC------CCCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCceEE
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP------NGETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLL 837 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~l 837 (1001)
.|++.+.||+|+||+||+|+.. +++.||+|++..... .+.+.+|+.+++.++||||+++++++...+..++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 4677888999999999999853 257899999865433 2568889999999999999999999999999999
Q ss_pred EEEccCCCCHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCc
Q 001873 838 FYDYLPNGSLSSLLHGAG--------------KGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQ 903 (1001)
Q Consensus 838 v~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~ 903 (1001)
++||+++++|.+++.... ...+++..+.+++.|++.|++|+|+. +|+||||||+||++++++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCCCc
Confidence 999999999999985321 22467888899999999999999998 9999999999999999999
Q ss_pred EEEecccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 904 AYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 904 ~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
+||+|||+++........ .......+++.|+|||++....++.++||||+||++|||++ |..||.+.
T Consensus 163 ~kl~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~ 230 (283)
T cd05091 163 VKISDLGLFREVYAADYY-----KLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY 230 (283)
T ss_pred eEecccccccccccchhe-----eeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCC
Confidence 999999998865432111 11122346788999999988889999999999999999998 88888764
No 245
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.97 E-value=8.4e-30 Score=276.98 Aligned_cols=200 Identities=26% Similarity=0.351 Sum_probs=172.6
Q ss_pred hcccCCCeEeecCCeeEEEEEe-CCCCEEEEEEecCCC-----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTI-PNGETLAVKKMWSSD-----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
++|++.+.||+|+||.||+++. .+++.||||.+.... ..+++.+|+.+++.++||||+++++++.+++..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4688889999999999999995 478999999875322 2257889999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccC
Q 001873 840 DYLPNGSLSSLLHGA--GKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSG 917 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~ 917 (1001)
||+++++|.+++... ....+++..+..++.|++.|+.|||+. +++|+||||+||+++.++.++++|||.+.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 999999999998742 234578999999999999999999998 999999999999999999999999999876532
Q ss_pred CCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 918 SGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 918 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.. .......|+..|+|||...+..++.++||||||+++|+|++|..||...
T Consensus 159 ~~-------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 209 (267)
T cd08229 159 KT-------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD 209 (267)
T ss_pred CC-------cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 21 1112346889999999998888999999999999999999999999754
No 246
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.96 E-value=2e-29 Score=272.33 Aligned_cols=193 Identities=25% Similarity=0.384 Sum_probs=162.2
Q ss_pred eEeecCCeeEEEEEeC---CCCEEEEEEecCCCc----hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCCC
Q 001873 773 VIGTGSSGVVYRVTIP---NGETLAVKKMWSSDE----SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNG 845 (1001)
Q Consensus 773 ~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~----~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 845 (1001)
+||+|+||.||+|.++ +++.||+|++..... .+++.+|+.++++++||||+++++++.. +..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCCC
Confidence 5899999999999653 578899998864432 2578899999999999999999998864 4568999999999
Q ss_pred CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCCC
Q 001873 846 SLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSK 925 (1001)
Q Consensus 846 sL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~ 925 (1001)
+|.+++... ..+++..+.+++.|++.|++|+|++ +|+||||||+||++++++.+||+|||.++.+......
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~---- 151 (257)
T cd05116 81 PLNKFLQKN--KHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENY---- 151 (257)
T ss_pred cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCe----
Confidence 999999754 3588999999999999999999998 9999999999999999999999999999876432211
Q ss_pred CCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 926 TNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 926 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
........++..|+|||.+....++.++|||||||++|||++ |+.||...
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~ 202 (257)
T cd05116 152 YKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGM 202 (257)
T ss_pred eeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 011122234678999999988889999999999999999998 99999864
No 247
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.96 E-value=2.1e-29 Score=280.55 Aligned_cols=202 Identities=28% Similarity=0.394 Sum_probs=168.4
Q ss_pred hcccCCCeEeecCCeeEEEEEeC--------CCCEEEEEEecCCCc---hhhHHHHHHHhhcc-CCCceeeEEeeeecCC
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP--------NGETLAVKKMWSSDE---SGAFSSEIQTLGSI-RHKNIVRLLGWGSNKN 833 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~~ 833 (1001)
++|.+.+.||+|+||.||+|+.. ....||+|.+..... ...+.+|+.+++++ +||||+++++++.+.+
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 57889999999999999998742 245799998865432 24678899999999 6999999999999999
Q ss_pred ceEEEEEccCCCCHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEEC
Q 001873 834 LKLLFYDYLPNGSLSSLLHGAG--------------KGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLG 899 (1001)
Q Consensus 834 ~~~lv~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~ 899 (1001)
..++||||+++|+|.+++.... ...+++.++.+++.|++.|++|||++ +|+||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill~ 168 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVLVT 168 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeEEEc
Confidence 9999999999999999997532 13478889999999999999999998 999999999999999
Q ss_pred CCCcEEEecccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 900 PGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 900 ~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
+++.+||+|||.++......... ......++..|+|||++.+..++.++||||||+++|||++ |+.||...
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~ 240 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDYYK-----KTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGI 240 (314)
T ss_pred CCCcEEEcccccccccccccccc-----ccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999998654321110 1111234467999999988899999999999999999999 89998654
No 248
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.96 E-value=2.3e-29 Score=276.48 Aligned_cols=199 Identities=28% Similarity=0.406 Sum_probs=170.9
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYD 840 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e 840 (1001)
++|+..+.||+|+||.||+|+.+ +++.||+|++.... ..+.+.+|+.++++++||||+++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 36888999999999999999976 58999999875432 22567899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCC
Q 001873 841 YLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGD 920 (1001)
Q Consensus 841 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~ 920 (1001)
|++++.+..+.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++++||+|||++........
T Consensus 81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 81 YCDHTVLNELEKNP--RGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD 155 (286)
T ss_pred ccCccHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCCcc
Confidence 99998888887653 3489999999999999999999998 999999999999999999999999999987643221
Q ss_pred CCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 921 DNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 921 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
......++..|+|||++.+ ..++.++||||+|+++|||++|+.||.+..
T Consensus 156 -------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~ 205 (286)
T cd07847 156 -------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKS 205 (286)
T ss_pred -------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence 1122357889999998865 567899999999999999999999997654
No 249
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.96 E-value=2.2e-29 Score=277.44 Aligned_cols=199 Identities=26% Similarity=0.371 Sum_probs=169.0
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
++|++.+.||+|+||.||+|+.+ +++.||+|.+..... ...+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 57889999999999999999976 689999998854322 24577899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
++ ++|.+++.+.. ..+++..+..++.|++.|+.|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 85 ~~-~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~-- 157 (291)
T cd07844 85 LD-TDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVPS-- 157 (291)
T ss_pred CC-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCCC--
Confidence 98 59999987653 3578999999999999999999998 99999999999999999999999999987532111
Q ss_pred CCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
.......++..|+|||++.+ ..++.++||||+|+++|||++|+.||....
T Consensus 158 -----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~ 208 (291)
T cd07844 158 -----KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGST 208 (291)
T ss_pred -----ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCc
Confidence 11112246789999998865 568899999999999999999999997543
No 250
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.96 E-value=1.5e-29 Score=276.08 Aligned_cols=197 Identities=28% Similarity=0.384 Sum_probs=173.6
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC---chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD---ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
++|+..+.||.|+||.||+|+.. +++.||+|.+.... ....+.+|+++++.++|+||+++++++.++...++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 36888899999999999999865 68999999886443 235688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
+++++|.+++... .+++..+..++.|++.|+.|||++ +++||||+|+||++++++.++|+|||.++.+....
T Consensus 81 ~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-- 152 (274)
T cd06609 81 CGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM-- 152 (274)
T ss_pred eCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeecccc--
Confidence 9999999999853 579999999999999999999998 99999999999999999999999999998764321
Q ss_pred CCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.......|++.|+|||.+.+..++.++||||||+++|||+||+.||+..
T Consensus 153 -----~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~ 201 (274)
T cd06609 153 -----SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDL 201 (274)
T ss_pred -----cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 1122346888999999998888999999999999999999999999754
No 251
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.96 E-value=2.3e-29 Score=271.63 Aligned_cols=200 Identities=27% Similarity=0.454 Sum_probs=172.0
Q ss_pred hcccCCCeEeecCCeeEEEEEeCCCCEEEEEEecCCC-chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCC
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSD-ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPN 844 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 844 (1001)
.+|++.+.||+|+||.||++.+.+++.+|+|.+.... ...++.+|++++++++||||+++++++......++||||+++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 83 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEH 83 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCC
Confidence 3578889999999999999998778899999886543 346799999999999999999999999999999999999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCC
Q 001873 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924 (1001)
Q Consensus 845 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~ 924 (1001)
++|.+++.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++.......
T Consensus 84 ~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~---- 155 (256)
T cd05112 84 GCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY---- 155 (256)
T ss_pred CcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCcc----
Confidence 99999997542 3478899999999999999999998 999999999999999999999999999876532211
Q ss_pred CCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 925 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
.......++.+|+|||.+.+..++.++||||+|+++|||++ |+.||...
T Consensus 156 --~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~ 205 (256)
T cd05112 156 --TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENR 205 (256)
T ss_pred --cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcC
Confidence 11112235678999999988889999999999999999998 99999754
No 252
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.96 E-value=1.8e-29 Score=276.48 Aligned_cols=203 Identities=22% Similarity=0.309 Sum_probs=171.2
Q ss_pred HhcccCCCeEeecCCeeEEEEEeCC-----CCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeec-CCce
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIPN-----GETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSN-KNLK 835 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~~-----~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~-~~~~ 835 (1001)
.++|++.++||+|+||.||+|.+.+ +..||+|++..... .+.+.+|+.++++++||||+++++++.. ....
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 3578889999999999999999765 68899998864432 3568899999999999999999998765 5678
Q ss_pred EEEEEccCCCCHHHHhhcCCC------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecc
Q 001873 836 LLFYDYLPNGSLSSLLHGAGK------GGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADF 909 (1001)
Q Consensus 836 ~lv~e~~~~gsL~~~l~~~~~------~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Df 909 (1001)
++++||+++|+|.+++..... ..+++.++..++.|++.|++|||+. +++||||||+||++++++.+||+||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECCC
Confidence 999999999999999976432 3578999999999999999999998 9999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 910 GLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 910 gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
|+++.+....... ......++..|+|||++....++.++||||||+++||+++ |+.||...
T Consensus 162 g~~~~~~~~~~~~-----~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 223 (280)
T cd05043 162 ALSRDLFPMDYHC-----LGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEI 223 (280)
T ss_pred CCcccccCCceEE-----eCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcC
Confidence 9998654322110 0112245678999999988889999999999999999999 99999764
No 253
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.96 E-value=1.8e-29 Score=272.70 Aligned_cols=196 Identities=29% Similarity=0.425 Sum_probs=167.5
Q ss_pred CeEeecCCeeEEEEEeCC--C--CEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCC
Q 001873 772 NVIGTGSSGVVYRVTIPN--G--ETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPN 844 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~~--~--~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 844 (1001)
+.||+|+||.||+|.+.+ + ..||||.+..... .+.+.+|+.++++++||||+++++++.+ ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999998643 2 3699999866543 3678899999999999999999999888 888999999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCC
Q 001873 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924 (1001)
Q Consensus 845 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~ 924 (1001)
++|.+++.+.....+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++.+.......
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~-- 154 (257)
T cd05040 80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHY-- 154 (257)
T ss_pred CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccccccce--
Confidence 9999999875435679999999999999999999998 99999999999999999999999999998764432111
Q ss_pred CCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 925 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
.......++..|+|||.+....++.++|||||||++|||++ |+.||+..
T Consensus 155 --~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~ 204 (257)
T cd05040 155 --VMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGL 204 (257)
T ss_pred --ecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence 11123457789999999998899999999999999999999 99999654
No 254
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.96 E-value=2.4e-29 Score=272.48 Aligned_cols=200 Identities=27% Similarity=0.379 Sum_probs=174.1
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC--chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEcc
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD--ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYL 842 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 842 (1001)
++|++.+.||+|+||.||+|+.. +++.+|+|.+.... ..+.+.+|++++++++||||+++++++.+.+..+++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 57888999999999999999875 57889999886443 3467899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCC
Q 001873 843 PNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922 (1001)
Q Consensus 843 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~ 922 (1001)
++++|.+++... ...+++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||.+.......
T Consensus 83 ~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--- 155 (262)
T cd06613 83 GGGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI--- 155 (262)
T ss_pred CCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhhhh---
Confidence 999999998764 24588999999999999999999998 99999999999999999999999999987654321
Q ss_pred CCCCCCCCcccccccccCccccccC---CCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 923 CSKTNQRPQLAGSYGYMAPEHASMQ---RITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 923 ~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
.......++..|+|||.+... .++.++||||+|+++|||++|+.||....
T Consensus 156 ----~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~ 208 (262)
T cd06613 156 ----AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLH 208 (262)
T ss_pred ----hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence 112234688899999998776 88899999999999999999999997643
No 255
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.96 E-value=5.1e-32 Score=266.85 Aligned_cols=194 Identities=29% Similarity=0.369 Sum_probs=161.9
Q ss_pred CCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc---hhhHHHHHHHh-hccCCCceeeEEeeeecCCceEEEEEccCCC
Q 001873 771 ANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE---SGAFSSEIQTL-GSIRHKNIVRLLGWGSNKNLKLLFYDYLPNG 845 (1001)
Q Consensus 771 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~Ei~~l-~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 845 (1001)
...||.|+||+|+|..++ .|+.+|||++..... .+++..|.+.. +.-+.||||+++|.+..++..||.||.|+ .
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd-~ 147 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD-I 147 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh-h
Confidence 457999999999998865 699999999976543 46788888874 44479999999999888888999999996 5
Q ss_pred CHHHH---hhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCC
Q 001873 846 SLSSL---LHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922 (1001)
Q Consensus 846 sL~~~---l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~ 922 (1001)
|+..+ +....+..+++...-+|+...+.|++||-.+. .|||||+||+|||++..|.+|+||||.+..+...
T Consensus 148 SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S---- 221 (361)
T KOG1006|consen 148 SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS---- 221 (361)
T ss_pred hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHHH----
Confidence 66544 44445566888888899999999999999974 9999999999999999999999999998776432
Q ss_pred CCCCCCCCcccccccccCcccccc--CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 923 CSKTNQRPQLAGSYGYMAPEHASM--QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 923 ~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
-..+.-+|...|||||.+.. ..|+.+|||||+|+++||+.||+.|+.+-
T Consensus 222 ----iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w 272 (361)
T KOG1006|consen 222 ----IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKW 272 (361)
T ss_pred ----HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchH
Confidence 22333468889999998853 46899999999999999999999998764
No 256
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3e-31 Score=287.67 Aligned_cols=198 Identities=27% Similarity=0.339 Sum_probs=168.9
Q ss_pred hcccCCCeEeecCCeeEEEEEeCC-CCEEEEEEec--CCCchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEcc
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIPN-GETLAVKKMW--SSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYL 842 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~--~~~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 842 (1001)
+.|.++..||.|+||+||++..++ +--.|.|.+. ...+-+++.-||++++.++||+||++++.|..++..||+.|||
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC 111 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC 111 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence 456778889999999999998764 3345567663 3344578999999999999999999999888888999999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCC
Q 001873 843 PNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922 (1001)
Q Consensus 843 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~ 922 (1001)
.||-...++-+. ...+.+.++..+.+|++.|+.|||++ .|||||||+.|||++-+|.++++|||.+....
T Consensus 112 ~GGAVDaimlEL-~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~------ 181 (1187)
T KOG0579|consen 112 GGGAVDAIMLEL-GRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNK------ 181 (1187)
T ss_pred CCchHhHHHHHh-ccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccch------
Confidence 999998888765 35688999999999999999999999 99999999999999999999999999875432
Q ss_pred CCCCCCCCcccccccccCcccc-----ccCCCCCccchHHHHHHHHHHHhCCCCCCC
Q 001873 923 CSKTNQRPQLAGSYGYMAPEHA-----SMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974 (1001)
Q Consensus 923 ~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~Dv~SlG~il~elltg~~Pf~~ 974 (1001)
.....+..+.|||+|||||++ ...+|++++||||||+++.||..+.+|-..
T Consensus 182 -~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhe 237 (1187)
T KOG0579|consen 182 -STRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHE 237 (1187)
T ss_pred -hHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccc
Confidence 222345567899999999976 458999999999999999999999988643
No 257
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.96 E-value=2.4e-29 Score=273.69 Aligned_cols=205 Identities=27% Similarity=0.417 Sum_probs=170.1
Q ss_pred hcccCCCeEeecCCeeEEEEEeCC-C---CEEEEEEecCCC---chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIPN-G---ETLAVKKMWSSD---ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLF 838 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~~-~---~~vavK~~~~~~---~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv 838 (1001)
..|++.+.||+|+||.||+|+... + ..||||.+.... ..++|..|+.++++++||||+++++++.+++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 357888999999999999998652 3 369999986542 235799999999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCC
Q 001873 839 YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGS 918 (1001)
Q Consensus 839 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~ 918 (1001)
|||+++|+|.+++... ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.+..+...
T Consensus 84 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 159 (269)
T cd05065 84 TEFMENGALDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 159 (269)
T ss_pred EecCCCCcHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCccccccccC
Confidence 9999999999999764 34578999999999999999999998 9999999999999999999999999998765432
Q ss_pred CCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 919 GDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 919 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
.... ..........+..|+|||.+....++.++||||+||++||+++ |..||....
T Consensus 160 ~~~~--~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~ 216 (269)
T cd05065 160 TSDP--TYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS 216 (269)
T ss_pred cccc--ccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCC
Confidence 2111 0011111112457999999998899999999999999999886 999997643
No 258
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.96 E-value=3.3e-29 Score=272.16 Aligned_cols=200 Identities=27% Similarity=0.421 Sum_probs=168.8
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-------chhhHHHHHHHhhccCCCceeeEEeeeec--CCceE
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-------ESGAFSSEIQTLGSIRHKNIVRLLGWGSN--KNLKL 836 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-------~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~--~~~~~ 836 (1001)
.|+..+.||+|+||.||+|... ++..||+|++.... ....+.+|+.++++++||||+++++++.+ ....+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 5888899999999999999864 68999999875321 12468889999999999999999998765 35678
Q ss_pred EEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEeccccccccc
Q 001873 837 LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVS 916 (1001)
Q Consensus 837 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~ 916 (1001)
++|||+++++|.+++.... .+++.....++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 83 l~~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~ 157 (266)
T cd06651 83 IFMEYMPGGSVKDQLKAYG--ALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 157 (266)
T ss_pred EEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCccccc
Confidence 9999999999999997643 478888899999999999999998 99999999999999999999999999987653
Q ss_pred CCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 917 GSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 917 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.... .........++..|+|||.+.+..++.++||||+||++||+++|+.||...
T Consensus 158 ~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~ 212 (266)
T cd06651 158 TICM----SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEY 212 (266)
T ss_pred cccc----cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCcccc
Confidence 2211 111112345888999999998888999999999999999999999999754
No 259
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.96 E-value=2.5e-29 Score=277.69 Aligned_cols=202 Identities=26% Similarity=0.387 Sum_probs=170.8
Q ss_pred hcccCCCeEeecCCeeEEEEEeCC-----------------CCEEEEEEecCCC---chhhHHHHHHHhhccCCCceeeE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIPN-----------------GETLAVKKMWSSD---ESGAFSSEIQTLGSIRHKNIVRL 825 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~~-----------------~~~vavK~~~~~~---~~~~~~~Ei~~l~~l~h~nIv~l 825 (1001)
++|++.+.||+|+||.||+|+... +..||+|++.... ..+.+.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~ 84 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL 84 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 578999999999999999987542 2468999886543 23578899999999999999999
Q ss_pred EeeeecCCceEEEEEccCCCCHHHHhhcCC---------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCe
Q 001873 826 LGWGSNKNLKLLFYDYLPNGSLSSLLHGAG---------KGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNV 896 (1001)
Q Consensus 826 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---------~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NI 896 (1001)
++++..++..++||||+++++|.+++.+.. ...+++..++.++.|++.|++|||+. +|+||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~Ni 161 (296)
T cd05051 85 LGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchhce
Confidence 999999999999999999999999997643 12578999999999999999999998 999999999999
Q ss_pred EECCCCcEEEecccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh--CCCCCCC
Q 001873 897 LLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT--GRHPLDP 974 (1001)
Q Consensus 897 ll~~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt--g~~Pf~~ 974 (1001)
+++.++.++|+|||.++........ .......+++.|+|||.+....++.++|||||||++|||++ |..||..
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~ 236 (296)
T cd05051 162 LVGKNYTIKIADFGMSRNLYSSDYY-----RVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEH 236 (296)
T ss_pred eecCCCceEEccccceeecccCcce-----eecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCC
Confidence 9999999999999998765332111 11223356788999999988889999999999999999998 7788865
Q ss_pred C
Q 001873 975 T 975 (1001)
Q Consensus 975 ~ 975 (1001)
.
T Consensus 237 ~ 237 (296)
T cd05051 237 L 237 (296)
T ss_pred c
Confidence 4
No 260
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.96 E-value=1.9e-29 Score=278.29 Aligned_cols=203 Identities=28% Similarity=0.381 Sum_probs=170.1
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC------CCCEEEEEEecCCCc---hhhHHHHHHHhhcc-CCCceeeEEeeeecCCc
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP------NGETLAVKKMWSSDE---SGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNL 834 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~~~ 834 (1001)
.++|++.+.||+|+||.||+++.. ....||+|.+..... ..++.+|+.+++++ +||||+++++++..++.
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 90 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGP 90 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCC
Confidence 356888899999999999999864 236799998865432 24688899999999 89999999999999999
Q ss_pred eEEEEEccCCCCHHHHhhcC--------------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECC
Q 001873 835 KLLFYDYLPNGSLSSLLHGA--------------GKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGP 900 (1001)
Q Consensus 835 ~~lv~e~~~~gsL~~~l~~~--------------~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~ 900 (1001)
.+++|||+++|+|.++++.. ....+++..+.+++.|++.|++|||+. +|+||||||+||++++
T Consensus 91 ~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~~~ 167 (293)
T cd05053 91 LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLVTE 167 (293)
T ss_pred eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEEcC
Confidence 99999999999999999652 134578899999999999999999998 9999999999999999
Q ss_pred CCcEEEecccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 901 GYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 901 ~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
++.+|++|||.++.+....... ......++..|+|||+..+..++.++|||||||++||+++ |..||...
T Consensus 168 ~~~~kL~Dfg~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~ 238 (293)
T cd05053 168 DHVMKIADFGLARDIHHIDYYR-----KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI 238 (293)
T ss_pred CCeEEeCcccccccccccccee-----ccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCC
Confidence 9999999999998764322111 1111234578999999988899999999999999999998 99998754
No 261
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.96 E-value=2.8e-29 Score=271.65 Aligned_cols=196 Identities=29% Similarity=0.446 Sum_probs=170.8
Q ss_pred CeEeecCCeeEEEEEeCC----CCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCC
Q 001873 772 NVIGTGSSGVVYRVTIPN----GETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPN 844 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 844 (1001)
+.||+|+||.||+|.... +..||+|.+..... .+++.+|++.+++++|+||+++++++......++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 468999999999998753 88999999865543 46888999999999999999999999999999999999999
Q ss_pred CCHHHHhhcCC-------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccC
Q 001873 845 GSLSSLLHGAG-------KGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSG 917 (1001)
Q Consensus 845 gsL~~~l~~~~-------~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~ 917 (1001)
++|.+++.... ...+++..+.+++.|+++|++|||++ +++||||||+||++++++.+||+|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccccccccc
Confidence 99999998642 25579999999999999999999998 999999999999999999999999999987653
Q ss_pred CCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 918 SGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 918 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
... ........++..|+|||.+....++.++||||+|+++|||++ |+.||...
T Consensus 158 ~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~ 211 (262)
T cd00192 158 DDY-----YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGL 211 (262)
T ss_pred ccc-----cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCC
Confidence 321 112233457889999999988889999999999999999999 69999865
No 262
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.96 E-value=2.8e-29 Score=275.51 Aligned_cols=201 Identities=28% Similarity=0.406 Sum_probs=166.7
Q ss_pred hcccCCCeEeecCCeeEEEEEe-----CCCCEEEEEEecCCCc--hhhHHHHHHHhhccCCCceeeEEeeeec--CCceE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTI-----PNGETLAVKKMWSSDE--SGAFSSEIQTLGSIRHKNIVRLLGWGSN--KNLKL 836 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~~--~~~~~~Ei~~l~~l~h~nIv~l~~~~~~--~~~~~ 836 (1001)
.+|++.+.||+|+||+||++.. .+++.||+|++..... .+.+.+|++++++++||||+++++++.. ....+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 4688899999999999999874 2578999999865433 3578899999999999999999997643 34678
Q ss_pred EEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEeccccccccc
Q 001873 837 LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVS 916 (1001)
Q Consensus 837 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~ 916 (1001)
+||||+++|+|.+++.+. ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 84 lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKH-RERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTKVLP 159 (284)
T ss_pred EEEEecCCCCHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCccccccc
Confidence 999999999999999754 23478999999999999999999998 99999999999999999999999999998764
Q ss_pred CCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCC
Q 001873 917 GSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974 (1001)
Q Consensus 917 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~ 974 (1001)
...... .......++..|+|||+..+..++.++||||+||++|||++|..|+..
T Consensus 160 ~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~ 213 (284)
T cd05081 160 QDKEYY----KVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCS 213 (284)
T ss_pred CCCcce----eecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCC
Confidence 332111 011112344569999999888899999999999999999998877543
No 263
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1.9e-31 Score=313.01 Aligned_cols=209 Identities=30% Similarity=0.428 Sum_probs=176.1
Q ss_pred cHHHHHhcccCCCeEeecCCeeEEEEE-eCCCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecCCc
Q 001873 760 SIDDVVRNLTSANVIGTGSSGVVYRVT-IPNGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNL 834 (1001)
Q Consensus 760 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~ 834 (1001)
....+.-+|....+||.|.||.||.+. ..+|+-.|||-++-.. ..+...+|..++..++|||+|+++|+-...+.
T Consensus 1229 ~lsnV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRek 1308 (1509)
T KOG4645|consen 1229 SLSNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREK 1308 (1509)
T ss_pred HhccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHH
Confidence 344455678888899999999999977 4579999999774322 23678899999999999999999999999999
Q ss_pred eEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEeccccccc
Q 001873 835 KLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARI 914 (1001)
Q Consensus 835 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~ 914 (1001)
.+|.||||++|+|.+.+...+ ..++.....+..|++.|+.|||+. |||||||||.||+++.+|.+|.+|||.|..
T Consensus 1309 v~IFMEyC~~GsLa~ll~~gr--i~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~k 1383 (1509)
T KOG4645|consen 1309 VYIFMEYCEGGSLASLLEHGR--IEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVK 1383 (1509)
T ss_pred HHHHHHHhccCcHHHHHHhcc--hhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeE
Confidence 999999999999999997542 256666677889999999999999 999999999999999999999999999998
Q ss_pred ccCCCCCCCCCCCCCCcccccccccCcccccc---CCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 915 VSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM---QRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
+.+..+... .......||+.|||||++.+ +....+.||||+|||+.||+||+.||....
T Consensus 1384 i~~~~~~~~---~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~d 1445 (1509)
T KOG4645|consen 1384 IKNNAQTMP---GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELD 1445 (1509)
T ss_pred ecCchhcCC---HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhcc
Confidence 876533222 22234589999999999865 445678999999999999999999998654
No 264
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.96 E-value=2.9e-29 Score=273.49 Aligned_cols=199 Identities=25% Similarity=0.347 Sum_probs=162.6
Q ss_pred cCCCeEeecCCeeEEEEEeCC-CC--EEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeec------CCce
Q 001873 769 TSANVIGTGSSGVVYRVTIPN-GE--TLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSN------KNLK 835 (1001)
Q Consensus 769 ~~~~~lG~G~fg~Vy~~~~~~-~~--~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~------~~~~ 835 (1001)
.+.+.||+|+||.||+|+..+ ++ .||+|.+.... ..+.+.+|+.++++++||||+++++++.. ....
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 466889999999999998754 32 68999875432 23568889999999999999999997642 2246
Q ss_pred EEEEEccCCCCHHHHhhcC----CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccc
Q 001873 836 LLFYDYLPNGSLSSLLHGA----GKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGL 911 (1001)
Q Consensus 836 ~lv~e~~~~gsL~~~l~~~----~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgl 911 (1001)
++||||+++|+|.+++... ....+++..+..++.|++.|++|||++ +|+||||||+||++++++.+||+|||+
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCCc
Confidence 8999999999999987432 123478999999999999999999998 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 912 ARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 912 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
++.+...... .......+++.|+|||......++.++||||||+++|||++ |+.||...
T Consensus 159 ~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~ 218 (272)
T cd05075 159 SKKIYNGDYY-----RQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGV 218 (272)
T ss_pred ccccCcccce-----ecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 9876432211 11122346678999999998999999999999999999999 88999754
No 265
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.96 E-value=1.9e-29 Score=284.25 Aligned_cols=202 Identities=28% Similarity=0.371 Sum_probs=166.2
Q ss_pred hcccCCCeEeecCCeeEEEEEe------CCCCEEEEEEecCCCc---hhhHHHHHHHhhcc-CCCceeeEEeeeec-CCc
Q 001873 766 RNLTSANVIGTGSSGVVYRVTI------PNGETLAVKKMWSSDE---SGAFSSEIQTLGSI-RHKNIVRLLGWGSN-KNL 834 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~-~~~ 834 (1001)
++|++.+.||+|+||+||+|.+ .+++.||||++..... ...+.+|+.++.++ +||||+++++++.. ...
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 86 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence 5799999999999999999973 3478899999865332 35688899999999 68999999998765 446
Q ss_pred eEEEEEccCCCCHHHHhhcCCC----------------------------------------------------------
Q 001873 835 KLLFYDYLPNGSLSSLLHGAGK---------------------------------------------------------- 856 (1001)
Q Consensus 835 ~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 856 (1001)
.++||||+++|+|.++++....
T Consensus 87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (343)
T cd05103 87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 166 (343)
T ss_pred eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence 7899999999999999865321
Q ss_pred -------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCCCCCCC
Q 001873 857 -------GGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQR 929 (1001)
Q Consensus 857 -------~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~ 929 (1001)
..+++..+.+++.|++.|++|||++ +|+||||||+||++++++++||+|||++......... ...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-----~~~ 238 (343)
T cd05103 167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY-----VRK 238 (343)
T ss_pred hhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcch-----hhc
Confidence 1256778889999999999999998 9999999999999999999999999999865322111 111
Q ss_pred CcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 930 PQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 930 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
....++..|+|||.+.+..++.++||||||+++|||++ |..||...
T Consensus 239 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 285 (343)
T cd05103 239 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 285 (343)
T ss_pred CCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCc
Confidence 12245678999999988899999999999999999997 99998754
No 266
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.96 E-value=2.9e-29 Score=271.15 Aligned_cols=197 Identities=30% Similarity=0.434 Sum_probs=171.6
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-------chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEE
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-------ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLF 838 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-------~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv 838 (1001)
+|+..+.||+|+||+||+|... +++.||+|.+.... ..+.+.+|+.++++++|+||+++++++.+....++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4677889999999999999876 78999999875432 235788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCC
Q 001873 839 YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGS 918 (1001)
Q Consensus 839 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~ 918 (1001)
|||+++++|.+++.+. ..+++..+..++.|++.|++|||+. +|+|+||+|+||+++.++.+||+|||.+......
T Consensus 81 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~ 155 (258)
T cd06632 81 LELVPGGSLAKLLKKY--GSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEF 155 (258)
T ss_pred EEecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceecccc
Confidence 9999999999999764 3478899999999999999999998 9999999999999999999999999998765322
Q ss_pred CCCCCCCCCCCCcccccccccCccccccCC-CCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 919 GDDNCSKTNQRPQLAGSYGYMAPEHASMQR-ITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 919 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
. ......|+..|+|||.+.... ++.++|+||+|+++|+|++|+.||....
T Consensus 156 ~--------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~ 206 (258)
T cd06632 156 S--------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE 206 (258)
T ss_pred c--------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc
Confidence 1 122346889999999987666 8999999999999999999999997654
No 267
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.96 E-value=3.7e-29 Score=275.62 Aligned_cols=199 Identities=25% Similarity=0.319 Sum_probs=167.3
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
+.|++.+.||+|+||.||+|... +++.||+|++..... ...+.+|+.+++.++|+||+++.+++..++..++||||
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEY 84 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEec
Confidence 57899999999999999999864 689999999864332 24678899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
+. +++.+++... ....++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 85 ~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 157 (291)
T cd07870 85 MH-TDLAQYMIQH-PGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKSIPS-- 157 (291)
T ss_pred cc-CCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccCCCC--
Confidence 96 7887777543 23467888888999999999999998 99999999999999999999999999987543211
Q ss_pred CCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
.......+++.|+|||++.+ ..++.++||||+||++|||++|+.||+...
T Consensus 158 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~ 208 (291)
T cd07870 158 -----QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVS 208 (291)
T ss_pred -----CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCch
Confidence 11122357889999999865 457889999999999999999999997543
No 268
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.96 E-value=1.6e-29 Score=277.34 Aligned_cols=199 Identities=27% Similarity=0.390 Sum_probs=172.8
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC---chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD---ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
++|++.+.||+|+||+||+++.. +++.||+|++.... ..+.+.+|+++++.++||||+++++++......++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 46888899999999999999865 58899999875432 236788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
+++++|.+++.+. ..+++..+..++.+++.|+.|||+.+ +++||||||+||++++++.++|+|||++......
T Consensus 85 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~--- 157 (284)
T cd06620 85 MDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS--- 157 (284)
T ss_pred CCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhh---
Confidence 9999999998764 34789999999999999999999742 8999999999999999999999999998754221
Q ss_pred CCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~ 977 (1001)
......|+..|+|||++.+..++.++|||||||++|++++|+.||....+
T Consensus 158 ------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~ 207 (284)
T cd06620 158 ------IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNI 207 (284)
T ss_pred ------ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccch
Confidence 11234689999999999888899999999999999999999999986543
No 269
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.96 E-value=1.9e-29 Score=278.49 Aligned_cols=203 Identities=25% Similarity=0.364 Sum_probs=168.5
Q ss_pred hcccCCCeEeecCCeeEEEEEeCC---------------CCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEe
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIPN---------------GETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLG 827 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~~---------------~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~ 827 (1001)
++|++.+.||+|+||.||+++... ...||+|++..... ...+.+|++++++++||||+++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 578999999999999999987532 23589998865322 256889999999999999999999
Q ss_pred eeecCCceEEEEEccCCCCHHHHhhcCCC----------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeE
Q 001873 828 WGSNKNLKLLFYDYLPNGSLSSLLHGAGK----------GGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVL 897 (1001)
Q Consensus 828 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~----------~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIl 897 (1001)
++...+..++||||+++++|.+++..... ...++..+..++.|++.|++|||+. +++||||||+||+
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhEE
Confidence 99999999999999999999999965321 2357888899999999999999998 9999999999999
Q ss_pred ECCCCcEEEecccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh--CCCCCCCC
Q 001873 898 LGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT--GRHPLDPT 975 (1001)
Q Consensus 898 l~~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt--g~~Pf~~~ 975 (1001)
+++++.+|++|||++........ ........++..|+|||+.....++.++|||||||++|||++ |..||...
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~ 236 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDY-----YRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLL 236 (295)
T ss_pred EcCCCcEEecccccccccccCcc-----eeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCccc
Confidence 99999999999999976532211 111122345678999999988889999999999999999998 66788764
Q ss_pred C
Q 001873 976 L 976 (1001)
Q Consensus 976 ~ 976 (1001)
.
T Consensus 237 ~ 237 (295)
T cd05097 237 S 237 (295)
T ss_pred C
Confidence 3
No 270
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.96 E-value=2.7e-29 Score=273.12 Aligned_cols=201 Identities=28% Similarity=0.441 Sum_probs=172.1
Q ss_pred cccCCCeEeecCCeeEEEEEe-CCCCEEEEEEecCCC--------chhhHHHHHHHhhccCCCceeeEEeeeecCCceEE
Q 001873 767 NLTSANVIGTGSSGVVYRVTI-PNGETLAVKKMWSSD--------ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLL 837 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~--------~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~l 837 (1001)
+|+..+.||+|+||.||+|+. .+++.||+|++.... ..+.+.+|+.++++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477889999999999999985 478999999885432 23578899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCC-cEEEeccccccccc
Q 001873 838 FYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGY-QAYLADFGLARIVS 916 (1001)
Q Consensus 838 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~-~~ki~Dfgla~~~~ 916 (1001)
||||+++++|.+++.+. ..+++..+..++.|++.|++|||+. +++||||||+||+++.++ .+||+|||.+..+.
T Consensus 81 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~ 155 (268)
T cd06630 81 FVEWMAGGSVSHLLSKY--GAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARLA 155 (268)
T ss_pred EEeccCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEcccccccccc
Confidence 99999999999999764 3478899999999999999999998 999999999999998776 69999999998765
Q ss_pred CCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 917 GSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 917 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
...... ........|+..|+|||.+.+..++.++||||+|+++|++++|+.||...
T Consensus 156 ~~~~~~---~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~ 211 (268)
T cd06630 156 AKGTGA---GEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAE 211 (268)
T ss_pred cccccC---CccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCC
Confidence 432111 11222346889999999998888999999999999999999999999743
No 271
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.96 E-value=2.8e-29 Score=271.90 Aligned_cols=189 Identities=24% Similarity=0.361 Sum_probs=158.0
Q ss_pred CeEeecCCeeEEEEEeCC-------------CCEEEEEEecCCC--chhhHHHHHHHhhccCCCceeeEEeeeecCCceE
Q 001873 772 NVIGTGSSGVVYRVTIPN-------------GETLAVKKMWSSD--ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKL 836 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~~-------------~~~vavK~~~~~~--~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~ 836 (1001)
+.||+|+||+||+|+... ...||+|.+.... ....+.+|+.+++.++||||+++++++..+...+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 368999999999997532 2358888875433 2357888999999999999999999999988999
Q ss_pred EEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCc-------EEEecc
Q 001873 837 LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQ-------AYLADF 909 (1001)
Q Consensus 837 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~-------~ki~Df 909 (1001)
+||||+++|+|..++... ...+++..+.+++.||++|++|||++ +|+||||||+||+++.++. +|++||
T Consensus 81 lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRK-SDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred EEEecccCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 999999999999998754 23478999999999999999999998 9999999999999986654 899999
Q ss_pred cccccccCCCCCCCCCCCCCCcccccccccCccccc-cCCCCCccchHHHHHHHHHHH-hCCCCCCCC
Q 001873 910 GLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHAS-MQRITEKSDVYSFGVVLLEVL-TGRHPLDPT 975 (1001)
Q Consensus 910 gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~SlG~il~ell-tg~~Pf~~~ 975 (1001)
|.+..... .....++..|+|||.+. ...++.++|||||||++|||+ +|+.||...
T Consensus 157 g~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~ 213 (262)
T cd05077 157 GIPITVLS-----------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDK 213 (262)
T ss_pred CCCccccC-----------cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCc
Confidence 99875421 11235778899999886 567899999999999999997 588888754
No 272
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.96 E-value=4.2e-29 Score=271.35 Aligned_cols=205 Identities=29% Similarity=0.443 Sum_probs=176.4
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC---chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD---ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
++|++.+.||+|+||+||+|... +++.||+|++.... ..+.+.+|+++++.++|+||+++++.+..+...++||||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 36889999999999999999865 68899999885433 346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCC-CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCC
Q 001873 842 LPNGSLSSLLHGAGK-GGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGD 920 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~-~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~ 920 (1001)
+++++|.++++.... ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||++..+.....
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 999999999976433 4578999999999999999999998 999999999999999999999999999987654322
Q ss_pred CCCCCCCCCCcccccccccCccccccC-CCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 921 DNCSKTNQRPQLAGSYGYMAPEHASMQ-RITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 921 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
.. ........|+..|+|||++... .++.++|+|||||++|||++|+.||....
T Consensus 158 ~~---~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~ 211 (267)
T cd06610 158 RT---RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYP 211 (267)
T ss_pred cc---ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccC
Confidence 11 1223445689999999998766 78899999999999999999999997653
No 273
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.96 E-value=2.7e-29 Score=275.63 Aligned_cols=200 Identities=28% Similarity=0.395 Sum_probs=168.0
Q ss_pred hcccCCCeEeecCCeeEEEEEe-----CCCCEEEEEEecCCC---chhhHHHHHHHhhccCCCceeeEEeeeecC--Cce
Q 001873 766 RNLTSANVIGTGSSGVVYRVTI-----PNGETLAVKKMWSSD---ESGAFSSEIQTLGSIRHKNIVRLLGWGSNK--NLK 835 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~---~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~--~~~ 835 (1001)
+.|++.+.||+|+||.||.++. .++..||+|.+.... ..+++.+|++++++++||||+++.+++.+. ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 3578889999999999999874 357889999986443 235788999999999999999999988765 567
Q ss_pred EEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccc
Q 001873 836 LLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIV 915 (1001)
Q Consensus 836 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~ 915 (1001)
++||||+++++|.+++.+.. ...++..+..++.|++.|++|+|++ +|+||||||+||+++.++.+||+|||+++.+
T Consensus 84 ~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAI 159 (284)
T ss_pred EEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCcccccc
Confidence 89999999999999997542 3579999999999999999999998 9999999999999999999999999999876
Q ss_pred cCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCC
Q 001873 916 SGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLD 973 (1001)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~ 973 (1001)
...... ........++..|+|||++.+..++.++||||||+++||++|++.|+.
T Consensus 160 ~~~~~~----~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~ 213 (284)
T cd05079 160 ETDKEY----YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSES 213 (284)
T ss_pred ccCccc----eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCc
Confidence 432211 111223457778999999988889999999999999999999877653
No 274
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.96 E-value=3.6e-29 Score=277.60 Aligned_cols=204 Identities=25% Similarity=0.325 Sum_probs=170.8
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEE
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYD 840 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e 840 (1001)
+|+..+.||+|+||.||+++.. .++.||+|.+.... ..+.+.+|+.+++.++||||+++++.+..++..++|||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME 81 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence 5788899999999999999875 57899999885432 23567789999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCC
Q 001873 841 YLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGD 920 (1001)
Q Consensus 841 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~ 920 (1001)
|+++++|.+++... ..+++..+..++.|++.|++|+|+. +++||||||+||+++.++.+|++|||.++.......
T Consensus 82 ~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~ 156 (305)
T cd05609 82 YVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLT 156 (305)
T ss_pred cCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCcCcc
Confidence 99999999999764 3478899999999999999999998 999999999999999999999999999874211100
Q ss_pred CC--------CCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 921 DN--------CSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 921 ~~--------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.. ...........|+..|+|||.+....++.++|+||||+++||+++|+.||.+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~ 219 (305)
T cd05609 157 TNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD 219 (305)
T ss_pred ccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 00 00001112346788999999998888999999999999999999999999754
No 275
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.96 E-value=4.2e-29 Score=271.66 Aligned_cols=202 Identities=28% Similarity=0.473 Sum_probs=169.3
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CC---CEEEEEEecCCC---chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NG---ETLAVKKMWSSD---ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLF 838 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~---~~vavK~~~~~~---~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv 838 (1001)
.+|+..+.||+|+||.||+|+.+ ++ ..||+|++.... ..+.+.+|++++++++||||+++.+++...+..++|
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII 84 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence 46777889999999999999865 23 379999886442 235788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCC
Q 001873 839 YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGS 918 (1001)
Q Consensus 839 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~ 918 (1001)
|||+++++|.+++.+. ...+++..+..++.|++.|++|||+. +++||||||+||++++++.+|++|||++......
T Consensus 85 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 160 (268)
T cd05063 85 TEYMENGALDKYLRDH-DGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVLEDD 160 (268)
T ss_pred EEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceecccc
Confidence 9999999999999764 24578999999999999999999998 9999999999999999999999999999866432
Q ss_pred CCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 919 GDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 919 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
.... ........+..|+|||++....++.++|||||||++||+++ |+.||...
T Consensus 161 ~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~ 214 (268)
T cd05063 161 PEGT----YTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDM 214 (268)
T ss_pred cccc----eeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcC
Confidence 1111 01111223467999999988889999999999999999997 99999754
No 276
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.5e-30 Score=270.03 Aligned_cols=199 Identities=24% Similarity=0.305 Sum_probs=171.5
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhcc-CCCceeeEEeeeecCCceEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLF 838 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~~~~~lv 838 (1001)
.+|..+.+||+|+||+|-++..+ +.+-||||+++++. +.+--..|-++++.- +-|.++++..++..-+..|+|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 45778889999999999999865 57889999876543 233345577777666 578999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCC
Q 001873 839 YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGS 918 (1001)
Q Consensus 839 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~ 918 (1001)
|||+.||+|.-.+++.++ +.+..+.-+|.+||-|+-+||++ +||+||||.+|||++.+|++||+|||+++.-.
T Consensus 429 MEyvnGGDLMyhiQQ~Gk--FKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni-- 501 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQVGK--FKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENI-- 501 (683)
T ss_pred EEEecCchhhhHHHHhcc--cCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeecccccccc--
Confidence 999999999999988655 66777777899999999999999 99999999999999999999999999998532
Q ss_pred CCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 919 GDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 919 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
.......+.+|||.|+|||++...+|+.++|-|||||++|||+.|..||++..
T Consensus 502 -----~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeD 554 (683)
T KOG0696|consen 502 -----FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED 554 (683)
T ss_pred -----cCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCC
Confidence 23334556799999999999999999999999999999999999999999864
No 277
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.96 E-value=4.8e-29 Score=269.34 Aligned_cols=195 Identities=28% Similarity=0.377 Sum_probs=163.6
Q ss_pred CeEeecCCeeEEEEEeCC----CCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCC
Q 001873 772 NVIGTGSSGVVYRVTIPN----GETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPN 844 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 844 (1001)
++||+|+||.||+|.+.. +..||+|.+..... .+++.+|++++++++||||+++++++.. ...++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG-EPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-CceEEEEEeCCC
Confidence 469999999999997532 36899999865543 3578899999999999999999998764 457999999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCC
Q 001873 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924 (1001)
Q Consensus 845 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~ 924 (1001)
|+|.+++.... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++.........
T Consensus 80 ~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~-- 152 (257)
T cd05060 80 GPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYY-- 152 (257)
T ss_pred CcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCccc--
Confidence 99999998653 578999999999999999999998 99999999999999999999999999998764332211
Q ss_pred CCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 925 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
.......++..|+|||......++.++||||||+++|||++ |+.||+...
T Consensus 153 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~ 203 (257)
T cd05060 153 --RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMK 203 (257)
T ss_pred --ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCC
Confidence 11111224567999999988899999999999999999998 999997653
No 278
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.96 E-value=1.9e-29 Score=276.85 Aligned_cols=197 Identities=26% Similarity=0.360 Sum_probs=167.0
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
+|+..+.||+|+||.||+|+.. +|+.||+|++.... ....+.+|++++++++||||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4788899999999999999975 68999999885432 225678899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
++ ++|.+++... ...+++..+..++.||++|+.|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-- 153 (284)
T cd07839 81 CD-QDLKKYFDSC-NGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV-- 153 (284)
T ss_pred CC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCC--
Confidence 97 5888887654 23489999999999999999999998 99999999999999999999999999997653221
Q ss_pred CCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.......+++.|+|||++.+ ..++.++||||+||++|||+||+.||.+.
T Consensus 154 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~ 203 (284)
T cd07839 154 -----RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG 203 (284)
T ss_pred -----CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCC
Confidence 11123357889999998865 44789999999999999999999987543
No 279
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.96 E-value=3.4e-29 Score=270.37 Aligned_cols=199 Identities=25% Similarity=0.359 Sum_probs=173.2
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC----CchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS----DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
+|+..+.||+|+||.||+++.. +++.||+|++... ...+++.+|+.++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 4788899999999999999864 6899999988532 2335788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
+++++|.+++........++.++.+++.|++.|+.|||+. +++|+||+|+||+++.++.++++|||.+........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~- 156 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE- 156 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh-
Confidence 9999999999865455678999999999999999999998 999999999999999999999999999976532211
Q ss_pred CCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
......|++.|+|||+..+..++.++|+|||||++|+|++|+.||...
T Consensus 157 ------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~ 204 (256)
T cd08218 157 ------LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAG 204 (256)
T ss_pred ------hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCC
Confidence 112235788999999998888999999999999999999999999753
No 280
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.96 E-value=3.6e-29 Score=273.93 Aligned_cols=201 Identities=26% Similarity=0.405 Sum_probs=169.2
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCC----EEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCceEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGE----TLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLL 837 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~l 837 (1001)
++|++.+.||+|+||.||+|..+ +++ .||+|....... ..++.+|+.++++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 56888999999999999999864 233 689998765432 2578899999999999999999999887 67899
Q ss_pred EEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccC
Q 001873 838 FYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSG 917 (1001)
Q Consensus 838 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~ 917 (1001)
||||+++|+|.+++.... ..+++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||.++....
T Consensus 86 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~ 161 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLDV 161 (279)
T ss_pred EEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCcccccccC
Confidence 999999999999998643 3478999999999999999999998 999999999999999999999999999987643
Q ss_pred CCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 918 SGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 918 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
..... ......++..|+|||......++.++|+||||+++||+++ |+.||+...
T Consensus 162 ~~~~~-----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 216 (279)
T cd05057 162 DEKEY-----HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIP 216 (279)
T ss_pred cccce-----ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCC
Confidence 22111 0111224568999999988899999999999999999999 999998654
No 281
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.96 E-value=3.7e-29 Score=273.47 Aligned_cols=198 Identities=27% Similarity=0.366 Sum_probs=172.3
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC---chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD---ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
..|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+|+.++++++||||+++++++.+....++||||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 45778889999999999999865 58899999886433 235788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
+++|+|.+++.. ..+++.....++.|++.|++|+|+. +++|+||+|+||+++.++.++++|||++.......
T Consensus 84 ~~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-- 155 (277)
T cd06640 84 LGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-- 155 (277)
T ss_pred CCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCCc--
Confidence 999999999874 3478888899999999999999998 99999999999999999999999999997654321
Q ss_pred CCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
.......++..|+|||++.+..++.++|+|||||++|||++|+.||....
T Consensus 156 -----~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~ 205 (277)
T cd06640 156 -----IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMH 205 (277)
T ss_pred -----cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcC
Confidence 11223467889999999988889999999999999999999999998654
No 282
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.96 E-value=1.1e-29 Score=277.62 Aligned_cols=198 Identities=28% Similarity=0.370 Sum_probs=170.9
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC---chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD---ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
+.|+..+.||+|+||.||+|... +++.||+|.+.... ..+.+.+|+.++++++||||+++++++......++||||
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEc
Confidence 45667788999999999999864 57899999876433 235788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
+++++|.+++.. ..+++..+..++.|++.|+.|||++ +++|+||+|+||++++++.++++|||++..+....
T Consensus 84 ~~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~-- 155 (277)
T cd06642 84 LGGGSALDLLKP---GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-- 155 (277)
T ss_pred cCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcc--
Confidence 999999999864 3578899999999999999999998 99999999999999999999999999997654321
Q ss_pred CCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
.......|+..|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus 156 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~ 205 (277)
T cd06642 156 -----IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLH 205 (277)
T ss_pred -----hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccc
Confidence 11122357889999999998889999999999999999999999997543
No 283
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.96 E-value=3.2e-29 Score=276.71 Aligned_cols=202 Identities=25% Similarity=0.374 Sum_probs=168.2
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-----------------CCCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-----------------NGETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRL 825 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-----------------~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l 825 (1001)
++|++.+.||+|+||.||+++.. ++..||+|++..... ..++.+|+.++++++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 46899999999999999998532 234689998864432 3578899999999999999999
Q ss_pred EeeeecCCceEEEEEccCCCCHHHHhhcCCC---------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCe
Q 001873 826 LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGK---------GGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNV 896 (1001)
Q Consensus 826 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~---------~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NI 896 (1001)
++++...+..++||||+++|+|.+++.+... ..+++.++..++.|++.|++|||+. +++||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChheE
Confidence 9999999999999999999999999976421 2356788999999999999999998 999999999999
Q ss_pred EECCCCcEEEecccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh--CCCCCCC
Q 001873 897 LLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT--GRHPLDP 974 (1001)
Q Consensus 897 ll~~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt--g~~Pf~~ 974 (1001)
+++.++.++++|||.++.+...... .......++..|+|||......++.++|||||||++|||++ |..||..
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~ 236 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYY-----RIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQ 236 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcce-----eccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccc
Confidence 9999999999999999865432211 11112234678999999888889999999999999999998 7788865
Q ss_pred C
Q 001873 975 T 975 (1001)
Q Consensus 975 ~ 975 (1001)
.
T Consensus 237 ~ 237 (296)
T cd05095 237 L 237 (296)
T ss_pred c
Confidence 4
No 284
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.96 E-value=3e-29 Score=275.65 Aligned_cols=204 Identities=25% Similarity=0.343 Sum_probs=170.0
Q ss_pred HHHhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-chhhHHHHHHHhhcc-CCCceeeEEeeee-----cCCc
Q 001873 763 DVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-ESGAFSSEIQTLGSI-RHKNIVRLLGWGS-----NKNL 834 (1001)
Q Consensus 763 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~-----~~~~ 834 (1001)
+..++|++.+.||+|+||.||+++.. +++.||+|+..... ...++.+|+.+++++ +||||+++++++. .++.
T Consensus 15 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~ 94 (286)
T cd06638 15 DPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQ 94 (286)
T ss_pred CcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCe
Confidence 35678999999999999999999865 58899999875433 236788899999999 6999999999873 3456
Q ss_pred eEEEEEccCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEeccccc
Q 001873 835 KLLFYDYLPNGSLSSLLHGA--GKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLA 912 (1001)
Q Consensus 835 ~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla 912 (1001)
.++||||+++++|.+++... ....+++..+..++.|++.|+.|||+. +|+||||||+||++++++.+|++|||++
T Consensus 95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~ 171 (286)
T cd06638 95 LWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGVKLVDFGVS 171 (286)
T ss_pred EEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCCEEEccCCce
Confidence 89999999999999988642 234578888999999999999999998 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCCCCCcccccccccCccccc-----cCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 913 RIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHAS-----MQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
+.+.... .......|++.|+|||++. ...++.++||||+||++|||++|+.||....
T Consensus 172 ~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~ 233 (286)
T cd06638 172 AQLTSTR-------LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLH 233 (286)
T ss_pred eecccCC-------CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCc
Confidence 8654221 1122336899999999875 3457889999999999999999999997653
No 285
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.96 E-value=4.4e-29 Score=269.43 Aligned_cols=198 Identities=23% Similarity=0.378 Sum_probs=172.2
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
+|+..+.||+|+||.||++... +++.||||.+.... ..+++.+|++++++++||||+++++.+..++..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 4788899999999999998864 68899999885432 346788999999999999999999999888999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCC-CcEEEecccccccccCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPG-YQAYLADFGLARIVSGSGD 920 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~ki~Dfgla~~~~~~~~ 920 (1001)
+++++|.+++.+.....+++..+.+++.|++.|++|||++ +++||||||+||+++++ +.+|++|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~- 156 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS- 156 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc-
Confidence 9999999999876555689999999999999999999998 99999999999999855 468999999998753221
Q ss_pred CCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 921 DNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 921 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
......|+..|+|||.+....++.++||||+|+++|+|++|+.||+..
T Consensus 157 -------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~ 204 (256)
T cd08220 157 -------KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAA 204 (256)
T ss_pred -------cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccC
Confidence 112346888999999998888899999999999999999999999764
No 286
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.96 E-value=7.9e-29 Score=269.05 Aligned_cols=204 Identities=24% Similarity=0.348 Sum_probs=166.2
Q ss_pred HHHhcccCCCeE--eecCCeeEEEEEeC-CCCEEEEEEecCCCchhhHHHHHHHhhcc-CCCceeeEEeeeecCCceEEE
Q 001873 763 DVVRNLTSANVI--GTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLF 838 (1001)
Q Consensus 763 ~~~~~~~~~~~l--G~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~~~~~lv 838 (1001)
+..++|++.+.+ |+|+||.||+++.+ +++.+|+|.+...... .. |+.....+ +||||+++++++...+..++|
T Consensus 11 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~-~~--e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv 87 (267)
T PHA03390 11 QFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN-AI--EPMVHQLMKDNPNFIKLYYSVTTLKGHVLI 87 (267)
T ss_pred HHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcc-hh--hHHHHHHhhcCCCEEEEEEEEecCCeeEEE
Confidence 344667777766 99999999999864 6888999987543211 11 22222222 799999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCC-cEEEecccccccccC
Q 001873 839 YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGY-QAYLADFGLARIVSG 917 (1001)
Q Consensus 839 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~-~~ki~Dfgla~~~~~ 917 (1001)
|||+++++|.+++.... .+++..+..++.|+++|+.|||+. +++||||||+||+++.++ .++|+|||.++....
T Consensus 88 ~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~ 162 (267)
T PHA03390 88 MDYIKDGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGT 162 (267)
T ss_pred EEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecCccceecCC
Confidence 99999999999998643 689999999999999999999998 999999999999999988 999999999876532
Q ss_pred CCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcCcccc
Q 001873 918 SGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQW 985 (1001)
Q Consensus 918 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~~~~~l~~~ 985 (1001)
. ....|+..|+|||++....++.++||||+|+++|||++|+.||...........+|
T Consensus 163 ~-----------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~ 219 (267)
T PHA03390 163 P-----------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESL 219 (267)
T ss_pred C-----------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHH
Confidence 1 12357899999999998889999999999999999999999998654433333333
No 287
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.96 E-value=4.3e-29 Score=273.75 Aligned_cols=203 Identities=25% Similarity=0.361 Sum_probs=171.1
Q ss_pred HHhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-chhhHHHHHHHhhcc-CCCceeeEEeeeec------CCc
Q 001873 764 VVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-ESGAFSSEIQTLGSI-RHKNIVRLLGWGSN------KNL 834 (1001)
Q Consensus 764 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~------~~~ 834 (1001)
..+.|++.+.||+|+||.||+|+.. +++.||+|.+.... ...++..|+.+++++ +||||+++++++.. ...
T Consensus 14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 93 (282)
T cd06636 14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQ 93 (282)
T ss_pred hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCE
Confidence 3467899999999999999999974 68899999875443 345788899999998 79999999998742 457
Q ss_pred eEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEeccccccc
Q 001873 835 KLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARI 914 (1001)
Q Consensus 835 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~ 914 (1001)
.+++|||+++|+|.+++........++..+..++.|++.|++|||+. +|+||||||+||++++++.++|+|||++..
T Consensus 94 ~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~~~l~dfg~~~~ 170 (282)
T cd06636 94 LWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 170 (282)
T ss_pred EEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCcchhh
Confidence 79999999999999999876555678888899999999999999998 999999999999999999999999999876
Q ss_pred ccCCCCCCCCCCCCCCcccccccccCccccc-----cCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 915 VSGSGDDNCSKTNQRPQLAGSYGYMAPEHAS-----MQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
..... .......|++.|+|||.+. ...++.++||||+||++|||++|+.||....
T Consensus 171 ~~~~~-------~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~ 230 (282)
T cd06636 171 LDRTV-------GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMH 230 (282)
T ss_pred hhccc-------cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccC
Confidence 53211 1123346899999999875 3567889999999999999999999997543
No 288
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.96 E-value=5.1e-29 Score=271.27 Aligned_cols=193 Identities=30% Similarity=0.469 Sum_probs=160.7
Q ss_pred CeEeecCCeeEEEEEeCC-CC--EEEEEEecCCC---chhhHHHHHHHhhcc-CCCceeeEEeeeecCCceEEEEEccCC
Q 001873 772 NVIGTGSSGVVYRVTIPN-GE--TLAVKKMWSSD---ESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPN 844 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~~-~~--~vavK~~~~~~---~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~ 844 (1001)
+.||+|+||.||+|+.++ +. .+|+|.++... ..+.+.+|+++++++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 368999999999998753 43 56888876432 235788999999999 799999999999999999999999999
Q ss_pred CCHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEeccc
Q 001873 845 GSLSSLLHGAG--------------KGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFG 910 (1001)
Q Consensus 845 gsL~~~l~~~~--------------~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfg 910 (1001)
|+|.+++++.. ...+++..+.+++.|++.|++|||+. +++||||||+||++++++.+|++|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCCC
Confidence 99999997532 12468889999999999999999998 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 911 LARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 911 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
++...... ........+..|+|||++....++.++||||||+++|||++ |+.||...
T Consensus 158 l~~~~~~~--------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~ 215 (270)
T cd05047 158 LSRGQEVY--------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM 215 (270)
T ss_pred Cccccchh--------hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCcccc
Confidence 98632110 01111133567999999988889999999999999999997 99999754
No 289
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.96 E-value=5.6e-29 Score=269.99 Aligned_cols=201 Identities=27% Similarity=0.407 Sum_probs=169.5
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC-------CchhhHHHHHHHhhccCCCceeeEEeeeecC--Cce
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS-------DESGAFSSEIQTLGSIRHKNIVRLLGWGSNK--NLK 835 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-------~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~--~~~ 835 (1001)
.+|++.+.||+|+||.||+|+.. +++.||+|.+... .....+.+|++++++++||||+++++++.+. +..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 36888999999999999999864 6899999987422 1225788999999999999999999988653 457
Q ss_pred EEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccc
Q 001873 836 LLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIV 915 (1001)
Q Consensus 836 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~ 915 (1001)
++|+||+++++|.+++...+ .+++..+.+++.|++.|+.|||+. +++||||||+||+++.++.++|+|||.++..
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 156 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG--ALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRI 156 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcccccccc
Confidence 89999999999999997643 378888999999999999999998 9999999999999999999999999999865
Q ss_pred cCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 916 SGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
..... .........|+..|+|||.+.+..++.++|+|||||++||+++|+.||...
T Consensus 157 ~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 212 (264)
T cd06653 157 QTICM----SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEY 212 (264)
T ss_pred ccccc----cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCcc
Confidence 32111 111122346889999999998888999999999999999999999999754
No 290
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.96 E-value=1.7e-29 Score=278.76 Aligned_cols=197 Identities=26% Similarity=0.381 Sum_probs=169.7
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC--chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEcc
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD--ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYL 842 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 842 (1001)
+.|+....||+|+||.||++... +++.||+|.+.... ..+.+.+|+.+++.++||||+++++++..++..++||||+
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~ 100 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFL 100 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecC
Confidence 33445557999999999999864 68999999885432 3457889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCC
Q 001873 843 PNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922 (1001)
Q Consensus 843 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~ 922 (1001)
++++|.+++.. ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 101 ~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~--- 171 (297)
T cd06659 101 QGGALTDIVSQ---TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV--- 171 (297)
T ss_pred CCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhccccc---
Confidence 99999998864 3478999999999999999999998 99999999999999999999999999987653221
Q ss_pred CCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 923 CSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 923 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.......|+..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 172 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~ 220 (297)
T cd06659 172 ----PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSD 220 (297)
T ss_pred ----ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 1122346889999999998888999999999999999999999999754
No 291
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.96 E-value=1.8e-29 Score=277.80 Aligned_cols=197 Identities=28% Similarity=0.411 Sum_probs=169.8
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC--chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEcc
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD--ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYL 842 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 842 (1001)
+.|.....||+|+||.||++... ++..||||++.... ..+.+.+|+.++++++||||+++++.+...+..++||||+
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 101 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFL 101 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCC
Confidence 44555567999999999999864 68899999875432 2356889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCC
Q 001873 843 PNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922 (1001)
Q Consensus 843 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~ 922 (1001)
++++|.+++.. ..+++..+..++.||+.|++|||++ +|+||||||+||++++++.+||+|||++.......
T Consensus 102 ~~~~L~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~--- 172 (292)
T cd06658 102 EGGALTDIVTH---TRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV--- 172 (292)
T ss_pred CCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhccccc---
Confidence 99999999864 3478899999999999999999998 99999999999999999999999999987653221
Q ss_pred CCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 923 CSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 923 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.......|+..|+|||......++.++||||+|+++|||++|+.||...
T Consensus 173 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~ 221 (292)
T cd06658 173 ----PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNE 221 (292)
T ss_pred ----ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 1122346889999999998888999999999999999999999999754
No 292
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.96 E-value=4.3e-29 Score=274.64 Aligned_cols=202 Identities=28% Similarity=0.424 Sum_probs=169.8
Q ss_pred hcccCCCeEeecCCeeEEEEEeC------CCCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCceE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP------NGETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKL 836 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~ 836 (1001)
++|++.+.||+|+||.||+|+.. ++..||+|++..... .+++.+|+.++++++||||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (288)
T cd05050 5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMC 84 (288)
T ss_pred HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccE
Confidence 56888999999999999999853 467899998865432 356889999999999999999999999989999
Q ss_pred EEEEccCCCCHHHHhhcCC--------------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCe
Q 001873 837 LFYDYLPNGSLSSLLHGAG--------------------KGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNV 896 (1001)
Q Consensus 837 lv~e~~~~gsL~~~l~~~~--------------------~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NI 896 (1001)
+||||+++|+|.+++.... ...+++..++.++.|++.|++|+|+. +++||||||+||
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~ni 161 (288)
T cd05050 85 LLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATRNC 161 (288)
T ss_pred EEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHhhe
Confidence 9999999999999997431 12367888899999999999999998 999999999999
Q ss_pred EECCCCcEEEecccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 897 LLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 897 ll~~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
++++++.+||+|||.++.+....... ......++..|+|||.+.+..++.++|||||||++|||++ |..||.+.
T Consensus 162 l~~~~~~~~l~dfg~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~ 236 (288)
T cd05050 162 LVGENMVVKIADFGLSRNIYSADYYK-----ASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGM 236 (288)
T ss_pred EecCCCceEECccccceecccCcccc-----ccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999987653322111 1111234567999999988899999999999999999998 88898654
No 293
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.96 E-value=4.2e-29 Score=275.21 Aligned_cols=205 Identities=19% Similarity=0.280 Sum_probs=156.6
Q ss_pred hcccCCCeEeecCCeeEEEEEeCC----CCEEEEEEecCCCch-------------hhHHHHHHHhhccCCCceeeEEee
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIPN----GETLAVKKMWSSDES-------------GAFSSEIQTLGSIRHKNIVRLLGW 828 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~-------------~~~~~Ei~~l~~l~h~nIv~l~~~ 828 (1001)
++|++.+.||+|+||+||+|+..+ +..+|+|+.....+. .....+...++.++|++|++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 689999999999999999998754 345666653222211 011223344566789999999987
Q ss_pred eecCC----ceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcE
Q 001873 829 GSNKN----LKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQA 904 (1001)
Q Consensus 829 ~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 904 (1001)
+.... ..++++|++. .++.+.+... ...++..+..++.|++.|++|||+. +|+||||||+||+++.++.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~~~ 165 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLV-ENTKEIFKRI--KCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNNRG 165 (294)
T ss_pred eeEecCCceEEEEEEehhc-cCHHHHHHhh--ccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCcE
Confidence 65443 3467788774 5777776643 2257788889999999999999998 99999999999999999999
Q ss_pred EEecccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 905 YLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 905 ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
||+|||+|+.+...+..............||+.|+|||+..+..++.++||||+||++|||++|+.||....
T Consensus 166 ~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~ 237 (294)
T PHA02882 166 YIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFG 237 (294)
T ss_pred EEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccc
Confidence 999999998765432221111122333469999999999999999999999999999999999999998763
No 294
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.96 E-value=5e-29 Score=280.06 Aligned_cols=202 Identities=29% Similarity=0.390 Sum_probs=168.5
Q ss_pred hcccCCCeEeecCCeeEEEEEeC--------CCCEEEEEEecCCCc---hhhHHHHHHHhhcc-CCCceeeEEeeeecCC
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP--------NGETLAVKKMWSSDE---SGAFSSEIQTLGSI-RHKNIVRLLGWGSNKN 833 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~~ 833 (1001)
.+|++.+.||+|+||.||+|+.. .+..||+|.+..... .+++.+|+.+++++ +||||+++++++...+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 46899999999999999999742 123689998765332 35788999999999 7999999999999999
Q ss_pred ceEEEEEccCCCCHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEEC
Q 001873 834 LKLLFYDYLPNGSLSSLLHGAG--------------KGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLG 899 (1001)
Q Consensus 834 ~~~lv~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~ 899 (1001)
..+++|||+++|+|.+++.+.. ...+++.++..++.|++.|++|||+. +|+||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEc
Confidence 9999999999999999997532 23467888999999999999999998 999999999999999
Q ss_pred CCCcEEEecccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 900 PGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 900 ~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
.++.+||+|||+++........ .......++..|+|||++.+..++.++||||||+++|||++ |+.||...
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~ 240 (334)
T cd05100 169 EDNVMKIADFGLARDVHNIDYY-----KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI 240 (334)
T ss_pred CCCcEEECCcccceeccccccc-----ccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCC
Confidence 9999999999999865432111 11112234567999999998899999999999999999998 88888754
No 295
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.96 E-value=4.5e-29 Score=274.95 Aligned_cols=201 Identities=27% Similarity=0.415 Sum_probs=174.2
Q ss_pred HHHhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC--chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 763 DVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD--ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 763 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
+..++|++.+.||+|+||.||++... +++.||+|.+.... ..+.+.+|+.++++++||||+++++++...+..++|+
T Consensus 16 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~ 95 (293)
T cd06647 16 DPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVM 95 (293)
T ss_pred CchhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEE
Confidence 33578999999999999999999854 68899999885432 3367889999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
||+++++|.+++.+ ..+++..+..++.|++.|+.|||+. +++||||||+||+++.++.+||+|||.+.......
T Consensus 96 e~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~ 169 (293)
T cd06647 96 EYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (293)
T ss_pred ecCCCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceecccccc
Confidence 99999999999974 3478889999999999999999998 99999999999999999999999999887653321
Q ss_pred CCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
.......|++.|+|||.+....++.++||||||+++|++++|+.||....
T Consensus 170 -------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~ 219 (293)
T cd06647 170 -------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN 219 (293)
T ss_pred -------cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 11223468889999999988889999999999999999999999997643
No 296
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.96 E-value=6.2e-29 Score=271.78 Aligned_cols=190 Identities=23% Similarity=0.255 Sum_probs=158.2
Q ss_pred eEeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhc---cCCCceeeEEeeeecCCceEEEEEccC
Q 001873 773 VIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGS---IRHKNIVRLLGWGSNKNLKLLFYDYLP 843 (1001)
Q Consensus 773 ~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~---l~h~nIv~l~~~~~~~~~~~lv~e~~~ 843 (1001)
+||+|+||.||++... +++.||+|.+.... ....+.+|..+++. .+||+|+.+++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999865 58999999875432 11234455544433 479999999999998899999999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCC
Q 001873 844 NGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNC 923 (1001)
Q Consensus 844 ~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~ 923 (1001)
+|+|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.++++|||++......
T Consensus 81 ~~~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~----- 150 (279)
T cd05633 81 GGDLHYHLSQH--GVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKK----- 150 (279)
T ss_pred CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceecccc-----
Confidence 99999998764 3489999999999999999999998 9999999999999999999999999998754321
Q ss_pred CCCCCCCcccccccccCccccc-cCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 924 SKTNQRPQLAGSYGYMAPEHAS-MQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 924 ~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
......||+.|+|||... +..++.++||||+||++|||++|+.||....
T Consensus 151 ----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 200 (279)
T cd05633 151 ----KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHK 200 (279)
T ss_pred ----CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCC
Confidence 112236899999999886 4568899999999999999999999998654
No 297
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.96 E-value=5.5e-29 Score=272.12 Aligned_cols=192 Identities=26% Similarity=0.309 Sum_probs=166.8
Q ss_pred EeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCCCCH
Q 001873 774 IGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSL 847 (1001)
Q Consensus 774 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 847 (1001)
||+|+||+||++... +++.||+|.+.... ....+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999865 68999999885321 234567899999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCCCCC
Q 001873 848 SSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927 (1001)
Q Consensus 848 ~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~~~ 927 (1001)
.+++.......+++..+..++.|++.|+.|||+. +++||||+|+||++++++.+||+|||.+...... .
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~--------~ 149 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG--------K 149 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccC--------C
Confidence 9999876555689999999999999999999998 9999999999999999999999999998765321 1
Q ss_pred CCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 928 QRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 928 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
......++..|+|||++.+..++.++||||+|+++|+|++|+.||....
T Consensus 150 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 198 (277)
T cd05577 150 KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRK 198 (277)
T ss_pred ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCc
Confidence 1123357889999999988889999999999999999999999997653
No 298
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.96 E-value=4.2e-29 Score=270.08 Aligned_cols=188 Identities=26% Similarity=0.402 Sum_probs=160.3
Q ss_pred CeEeecCCeeEEEEEeCCCC-----------EEEEEEecCCCc-hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 772 NVIGTGSSGVVYRVTIPNGE-----------TLAVKKMWSSDE-SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~~~~-----------~vavK~~~~~~~-~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
+.||+|+||.||+|...+.. .|++|.+..... ...+.+|+.++++++||||+++++++.. +..++||
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~ 79 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE 79 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence 46899999999999976433 578887654433 5789999999999999999999999887 7789999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCC-------cEEEeccccc
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGY-------QAYLADFGLA 912 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~-------~~ki~Dfgla 912 (1001)
||+++|+|.+++..... .+++..+..++.|++.|++|||++ +|+||||||+||+++.++ .+|++|||++
T Consensus 80 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a 155 (259)
T cd05037 80 EYVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP 155 (259)
T ss_pred EcCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence 99999999999986532 578999999999999999999998 999999999999999887 7999999999
Q ss_pred ccccCCCCCCCCCCCCCCcccccccccCccccccC--CCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 913 RIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ--RITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
..... .....++..|+|||++... .++.++||||+|+++||+++ |..||...
T Consensus 156 ~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~ 210 (259)
T cd05037 156 ITVLS-----------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTL 210 (259)
T ss_pred ccccc-----------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccC
Confidence 86532 1123466789999998776 78899999999999999999 57888665
No 299
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=1.5e-29 Score=297.67 Aligned_cols=201 Identities=19% Similarity=0.285 Sum_probs=160.1
Q ss_pred HHHHhcccCCCeEeecCCeeEEEEEeCC--CCEEEEE------------------EecCC-CchhhHHHHHHHhhccCCC
Q 001873 762 DDVVRNLTSANVIGTGSSGVVYRVTIPN--GETLAVK------------------KMWSS-DESGAFSSEIQTLGSIRHK 820 (1001)
Q Consensus 762 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK------------------~~~~~-~~~~~~~~Ei~~l~~l~h~ 820 (1001)
+.+.++|++.+.||+|+||+||++..+. +..+++| ++... .....+.+|+.++++++||
T Consensus 144 ~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hp 223 (501)
T PHA03210 144 DEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHE 223 (501)
T ss_pred hhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCC
Confidence 3456889999999999999999986532 2222222 11111 1235688999999999999
Q ss_pred ceeeEEeeeecCCceEEEEEccCCCCHHHHhhcCC---CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeE
Q 001873 821 NIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAG---KGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVL 897 (1001)
Q Consensus 821 nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIl 897 (1001)
||+++++++...+..++|+|++. +++.+++.... ........+..++.|++.||+|||++ +||||||||+|||
T Consensus 224 nIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NIL 299 (501)
T PHA03210 224 NILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIF 299 (501)
T ss_pred CcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEE
Confidence 99999999999999999999995 67877775422 11234566778999999999999998 9999999999999
Q ss_pred ECCCCcEEEecccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCC
Q 001873 898 LGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPL 972 (1001)
Q Consensus 898 l~~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf 972 (1001)
++.++.+||+|||+++.+..... .......||+.|+|||++.+..++.++|||||||++|||++|+.|+
T Consensus 300 l~~~~~vkL~DFGla~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p 368 (501)
T PHA03210 300 LNCDGKIVLGDFGTAMPFEKERE------AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCP 368 (501)
T ss_pred ECCCCCEEEEeCCCceecCcccc------cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence 99999999999999987643211 1223357999999999999999999999999999999999987644
No 300
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.96 E-value=5.7e-29 Score=271.72 Aligned_cols=201 Identities=24% Similarity=0.375 Sum_probs=170.6
Q ss_pred hcccCCCeEeecCCeeEEEEEeC------CCCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCceE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP------NGETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKL 836 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~ 836 (1001)
++|+..+.||+|+||+||+|+.+ +.+.||+|.+..... .+.+.+|++++++++||||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 56888899999999999999864 346799998754433 367899999999999999999999999989999
Q ss_pred EEEEccCCCCHHHHhhcCCCC-------CCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecc
Q 001873 837 LFYDYLPNGSLSSLLHGAGKG-------GADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADF 909 (1001)
Q Consensus 837 lv~e~~~~gsL~~~l~~~~~~-------~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Df 909 (1001)
+||||+++|+|.++++..... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEccc
Confidence 999999999999999865421 579999999999999999999998 9999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 910 GLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 910 gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
|+++...... ........++..|+|||.+....++.++||||||+++|++++ |..||...
T Consensus 162 ~~~~~~~~~~------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~ 222 (275)
T cd05046 162 SLSKDVYNSE------YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGL 222 (275)
T ss_pred ccccccCccc------ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence 9987543211 111223356778999999988888999999999999999998 88898643
No 301
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.96 E-value=4.8e-29 Score=273.54 Aligned_cols=199 Identities=26% Similarity=0.383 Sum_probs=164.7
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc---hhhHHHHHHH-hhccCCCceeeEEeeeecCCceEEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE---SGAFSSEIQT-LGSIRHKNIVRLLGWGSNKNLKLLFYD 840 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~Ei~~-l~~l~h~nIv~l~~~~~~~~~~~lv~e 840 (1001)
++|++.+.||+|+||.||+|+.. +|+.||+|++..... ..++..|+.. ++..+||||+++++++..++..++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 36888899999999999999875 699999998865432 2455566665 566789999999999999999999999
Q ss_pred ccCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCC
Q 001873 841 YLPNGSLSSLLHGA--GKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGS 918 (1001)
Q Consensus 841 ~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~ 918 (1001)
|++ |+|.+++... ....+++..+..++.|++.|++|||+++ +++||||||+||+++.++.+||+|||.++.+...
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 997 7888887642 2345799999999999999999999853 8999999999999999999999999998865321
Q ss_pred CCCCCCCCCCCCcccccccccCcccccc----CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 919 GDDNCSKTNQRPQLAGSYGYMAPEHASM----QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 919 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.......|+..|+|||.+.+ ..++.++|+||+||++|||++|+.||...
T Consensus 158 --------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 210 (283)
T cd06617 158 --------VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSW 210 (283)
T ss_pred --------cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCcc
Confidence 11122468889999998754 45688999999999999999999999753
No 302
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.96 E-value=9.1e-29 Score=267.20 Aligned_cols=199 Identities=29% Similarity=0.448 Sum_probs=171.1
Q ss_pred ccCCCeEeecCCeeEEEEEeCC-----CCEEEEEEecCCC---chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 768 LTSANVIGTGSSGVVYRVTIPN-----GETLAVKKMWSSD---ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 768 ~~~~~~lG~G~fg~Vy~~~~~~-----~~~vavK~~~~~~---~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
+++.+.||+|+||.||+++..+ +..||+|++.... ..+.+.+|+..++.++|+||+++++++.+.+..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3567889999999999998753 4889999986544 3468889999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
||+++++|.+++.......+++..+..++.|++.|++|||+. +++||||||+||++++++.++++|||.++......
T Consensus 81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceeccccc
Confidence 999999999999865443389999999999999999999998 99999999999999999999999999998764331
Q ss_pred CCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
... .....+++.|+|||......++.++||||+|+++|+|++ |+.||+..
T Consensus 158 ~~~------~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~ 208 (258)
T smart00219 158 YYK------KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM 208 (258)
T ss_pred ccc------cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Confidence 111 001236789999999988889999999999999999998 88888753
No 303
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.96 E-value=7.6e-29 Score=272.39 Aligned_cols=198 Identities=25% Similarity=0.345 Sum_probs=170.8
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
+|++.+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|+.++++++||||+++++++.++...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4788899999999999999965 68999999986543 235788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
+ +++|.+++.... ..+++.++..++.|+++|++|||+. +++|+||||+||+++.++.++|+|||.+........
T Consensus 81 ~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~- 154 (286)
T cd07832 81 M-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP- 154 (286)
T ss_pred c-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC-
Confidence 9 999999987643 5589999999999999999999998 999999999999999999999999999987643221
Q ss_pred CCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.......|+.+|+|||.+.+ ..++.++||||+|+++|||++|+.||.+.
T Consensus 155 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~ 204 (286)
T cd07832 155 -----RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGE 204 (286)
T ss_pred -----CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCC
Confidence 11223468899999998865 45689999999999999999998888654
No 304
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.96 E-value=7e-29 Score=273.38 Aligned_cols=203 Identities=27% Similarity=0.369 Sum_probs=169.6
Q ss_pred HHhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-chhhHHHHHHHhhcc-CCCceeeEEeeeecC-----Cce
Q 001873 764 VVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-ESGAFSSEIQTLGSI-RHKNIVRLLGWGSNK-----NLK 835 (1001)
Q Consensus 764 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~-----~~~ 835 (1001)
..++|++.+.||+|+||.||++... ++++||+|.+.... ...++.+|+.+++++ +||||+++++++... +..
T Consensus 20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~ 99 (291)
T cd06639 20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQL 99 (291)
T ss_pred CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCee
Confidence 3578999999999999999999874 68899999885533 346788899999998 899999999987643 357
Q ss_pred EEEEEccCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccc
Q 001873 836 LLFYDYLPNGSLSSLLHGA--GKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLAR 913 (1001)
Q Consensus 836 ~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~ 913 (1001)
++||||+++++|.++++.. ....+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+.
T Consensus 100 ~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~~~kl~dfg~~~ 176 (291)
T cd06639 100 WLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVKLVDFGVSA 176 (291)
T ss_pred EEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEeecccch
Confidence 9999999999999988642 234578999999999999999999998 99999999999999999999999999988
Q ss_pred cccCCCCCCCCCCCCCCcccccccccCccccccC-----CCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 914 IVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ-----RITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
....... ......|+..|+|||++... .++.++||||+||++|||++|+.||....
T Consensus 177 ~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~ 237 (291)
T cd06639 177 QLTSTRL-------RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMH 237 (291)
T ss_pred hcccccc-------cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCc
Confidence 6542211 11223688899999987543 36789999999999999999999997653
No 305
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.96 E-value=7.6e-29 Score=274.16 Aligned_cols=197 Identities=25% Similarity=0.317 Sum_probs=168.0
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc-------hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEE
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE-------SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLF 838 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv 838 (1001)
+|+..+.||+|+||.||+|... +++.||||++..... ...+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4778889999999999999865 689999999864332 24567899999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCC
Q 001873 839 YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGS 918 (1001)
Q Consensus 839 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~ 918 (1001)
|||+ +|+|.+++.... ..+++..+.+++.|+++|+.|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 155 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFGSP 155 (298)
T ss_pred Eccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeeccCC
Confidence 9999 899999998643 3589999999999999999999998 9999999999999999999999999999876432
Q ss_pred CCCCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 919 GDDNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 919 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.. ......+++.|+|||.+.+ ..++.++|||||||++|||++|..||...
T Consensus 156 ~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~ 206 (298)
T cd07841 156 NR-------KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGD 206 (298)
T ss_pred Cc-------cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCC
Confidence 11 1122356788999998754 56789999999999999999998777643
No 306
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.96 E-value=7.8e-29 Score=276.55 Aligned_cols=204 Identities=23% Similarity=0.306 Sum_probs=169.7
Q ss_pred cccCCCeEeecCCeeEEEEEeC---CCCEEEEEEecCC-----CchhhHHHHHHHhhccCCCceeeEEeeeecC--CceE
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP---NGETLAVKKMWSS-----DESGAFSSEIQTLGSIRHKNIVRLLGWGSNK--NLKL 836 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~-----~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~--~~~~ 836 (1001)
+|++.++||+|+||.||+|+.. +++.||+|.+... ...+.+.+|+.++++++||||+++++++.+. ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4778889999999999999975 4789999998762 2346788899999999999999999999887 7899
Q ss_pred EEEEccCCCCHHHHhhcCC---CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECC----CCcEEEecc
Q 001873 837 LFYDYLPNGSLSSLLHGAG---KGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGP----GYQAYLADF 909 (1001)
Q Consensus 837 lv~e~~~~gsL~~~l~~~~---~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~----~~~~ki~Df 909 (1001)
+||||++ +++.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 9999997 47777765432 23578899999999999999999998 9999999999999999 899999999
Q ss_pred cccccccCCCCCCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCC
Q 001873 910 GLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978 (1001)
Q Consensus 910 gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~~ 978 (1001)
|+++........ ........+++.|+|||++.+ ..++.++||||||+++|||++|+.||......
T Consensus 157 g~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~ 222 (316)
T cd07842 157 GLARLFNAPLKP----LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAK 222 (316)
T ss_pred ccccccCCCccc----ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCccc
Confidence 999876432211 112233468899999998765 46789999999999999999999999866543
No 307
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.96 E-value=5.1e-29 Score=271.67 Aligned_cols=189 Identities=23% Similarity=0.340 Sum_probs=156.4
Q ss_pred eEeecCCeeEEEEEeCC-------------------------CCEEEEEEecCCCc--hhhHHHHHHHhhccCCCceeeE
Q 001873 773 VIGTGSSGVVYRVTIPN-------------------------GETLAVKKMWSSDE--SGAFSSEIQTLGSIRHKNIVRL 825 (1001)
Q Consensus 773 ~lG~G~fg~Vy~~~~~~-------------------------~~~vavK~~~~~~~--~~~~~~Ei~~l~~l~h~nIv~l 825 (1001)
.||+|+||.||+|.... ...||+|.+..... ..++.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 58999999999987421 23588888754322 3568889999999999999999
Q ss_pred EeeeecCCceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCC---
Q 001873 826 LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGY--- 902 (1001)
Q Consensus 826 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~--- 902 (1001)
++++.+....++||||+++|+|.+++.+. ...+++..+.+++.|+++|++|||++ +|+||||||+||+++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEeccCccc
Confidence 99999999999999999999999998753 34578899999999999999999998 999999999999997543
Q ss_pred ----cEEEecccccccccCCCCCCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHH-hCCCCCCCCC
Q 001873 903 ----QAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVL-TGRHPLDPTL 976 (1001)
Q Consensus 903 ----~~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~ell-tg~~Pf~~~~ 976 (1001)
.+|++|||.+..... .....++..|+|||.+.+ ..++.++||||||+++||++ +|+.||....
T Consensus 158 ~~~~~~kl~d~g~~~~~~~-----------~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~ 226 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALS-----------REERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERT 226 (274)
T ss_pred CccceeeecCCcccccccc-----------ccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccC
Confidence 489999998764321 112357788999998865 66899999999999999995 7999997654
No 308
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.96 E-value=1.3e-28 Score=267.16 Aligned_cols=201 Identities=30% Similarity=0.455 Sum_probs=172.8
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc----hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE----SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
+|+..+.||+|+||.||+|... +++.||+|.+..... .+.+.+|+.++++++|+||+++++.+...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 5788899999999999999864 689999999865433 36788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
+++++|.+++... ...++..+..++.|+++|++|||+. +|+||||+|+||++++++.+||+|||.+.........
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 81 CSGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred CCCCcHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCCCc
Confidence 9999999999864 3478888999999999999999998 9999999999999999999999999999876443221
Q ss_pred CCCCCCCCCcccccccccCccccccCC---CCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASMQR---ITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.. .......+++.|+|||++.... ++.++||||||+++||+++|+.||...
T Consensus 156 ~~---~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~ 209 (264)
T cd06626 156 MG---EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSEL 209 (264)
T ss_pred cc---ccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCC
Confidence 11 1012346788999999987765 889999999999999999999999754
No 309
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.96 E-value=9.9e-29 Score=269.01 Aligned_cols=200 Identities=28% Similarity=0.381 Sum_probs=167.5
Q ss_pred hcccCCCeEeecCCeeEEEEEeCC----CCEEEEEEecCCC---chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIPN----GETLAVKKMWSSD---ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLF 838 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~---~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv 838 (1001)
++|++.+.||+|+||.||+|.+.+ ...||||...... ..+.+.+|+.++++++||||+++++++.+. ..++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITEN-PVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCC-CcEEE
Confidence 457888999999999999998643 3468999886543 235788999999999999999999988754 56899
Q ss_pred EEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCC
Q 001873 839 YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGS 918 (1001)
Q Consensus 839 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~ 918 (1001)
|||+++|+|.+++.... ..+++..+..++.|++.|++|+|+. +++||||||+||+++.++.+|++|||+++.....
T Consensus 85 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 160 (270)
T cd05056 85 MELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDE 160 (270)
T ss_pred EEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeecccc
Confidence 99999999999997643 3579999999999999999999998 9999999999999999999999999999866432
Q ss_pred CCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 919 GDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 919 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
.... .....++..|+|||.+....++.++||||||+++||+++ |+.||.+..
T Consensus 161 ~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~ 213 (270)
T cd05056 161 SYYK------ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVK 213 (270)
T ss_pred ccee------cCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 1111 112234568999999988889999999999999999986 999997654
No 310
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.96 E-value=6.8e-29 Score=272.46 Aligned_cols=198 Identities=27% Similarity=0.385 Sum_probs=169.4
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
+|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 3788899999999999999875 68999999885432 225688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
+. ++|.+++.......+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+|++|||++.......
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~-- 154 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-- 154 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCc--
Confidence 96 6899998776556689999999999999999999998 99999999999999999999999999987653221
Q ss_pred CCCCCCCCCcccccccccCccccccC-CCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASMQ-RITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.......+++.|+|||.+.+. .++.++||||||+++|||+||+.||.+.
T Consensus 155 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~ 204 (284)
T cd07860 155 -----RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 204 (284)
T ss_pred -----cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 111223568899999988654 4688999999999999999999999754
No 311
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.96 E-value=1.3e-28 Score=269.16 Aligned_cols=197 Identities=27% Similarity=0.382 Sum_probs=170.9
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC---chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD---ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
+-|+..+.||+|+||.||+|... +++.||+|.+.... ..+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 83 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence 34778889999999999999864 68899999875433 225688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
+++++|.+++.. ..+++..+..++.|++.|+.|||+. +++|+||||+||+++.++.++|+|||++..+....
T Consensus 84 ~~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~-- 155 (277)
T cd06641 84 LGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-- 155 (277)
T ss_pred CCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccch--
Confidence 999999999874 3478999999999999999999998 99999999999999999999999999987654321
Q ss_pred CCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.......|+..|+|||.+.+..++.++|+||+||++|+|++|..||...
T Consensus 156 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~ 204 (277)
T cd06641 156 -----IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSEL 204 (277)
T ss_pred -----hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCcc
Confidence 1112246788999999998888899999999999999999999999754
No 312
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.96 E-value=7e-29 Score=274.92 Aligned_cols=200 Identities=29% Similarity=0.461 Sum_probs=166.2
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCC----EEEEEEecCCCch---hhHHHHHHHhhccCCCceeeEEeeeecCCceEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGE----TLAVKKMWSSDES---GAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLL 837 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~~~~~---~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~l 837 (1001)
.+|+..+.||+|+||.||+|++. +++ .||+|.+...... .++.+|+.++++++||||+++++++... ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~ 85 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL 85 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence 45778889999999999999864 344 5788887654332 3688999999999999999999988754 4678
Q ss_pred EEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccC
Q 001873 838 FYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSG 917 (1001)
Q Consensus 838 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~ 917 (1001)
++||+++|+|.+++... ...+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.+..
T Consensus 86 v~e~~~~g~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~ 161 (303)
T cd05110 86 VTQLMPHGCLLDYVHEH-KDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 161 (303)
T ss_pred eehhcCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEccccccccccC
Confidence 99999999999999764 33478899999999999999999998 999999999999999999999999999987643
Q ss_pred CCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 918 SGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 918 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
.... .......++..|+|||.+.+..++.++||||||+++||+++ |+.||...
T Consensus 162 ~~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~ 215 (303)
T cd05110 162 DEKE-----YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGI 215 (303)
T ss_pred cccc-----cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 2111 11112345678999999998899999999999999999997 99999764
No 313
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.96 E-value=6.8e-29 Score=281.15 Aligned_cols=196 Identities=23% Similarity=0.318 Sum_probs=167.8
Q ss_pred HHhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecC------
Q 001873 764 VVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNK------ 832 (1001)
Q Consensus 764 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~------ 832 (1001)
+.++|+..+.||+|+||.||+|+.. +++.||+|++.... ..+.+.+|+.++++++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 5688999999999999999999865 68999999885421 235677899999999999999999987543
Q ss_pred CceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEeccccc
Q 001873 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLA 912 (1001)
Q Consensus 833 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla 912 (1001)
...++||||++ ++|.+.+... +++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.+
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg~~ 165 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 165 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCccc
Confidence 35699999996 5888888642 78888999999999999999998 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 913 RIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
+...... ......+++.|+|||.+.+..++.++||||+||++|+|++|+.||...
T Consensus 166 ~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~ 220 (353)
T cd07850 166 RTAGTSF--------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGT 220 (353)
T ss_pred eeCCCCC--------CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCC
Confidence 8653211 122346889999999999999999999999999999999999999754
No 314
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.96 E-value=3.2e-29 Score=270.87 Aligned_cols=197 Identities=27% Similarity=0.314 Sum_probs=173.7
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEE
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYD 840 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e 840 (1001)
+|++.+.||+|+||.||+|+.. +++.||+|.+.... ..+.+.+|++++++++||||+++++.+.+....++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4788899999999999999976 58999999885432 34678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCC
Q 001873 841 YLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGD 920 (1001)
Q Consensus 841 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~ 920 (1001)
|+++++|.+++... ..+++..+..++.|+++|+.|||+. +++|+||||+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~- 154 (258)
T cd05578 81 LLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT- 154 (258)
T ss_pred CCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCCc-
Confidence 99999999999764 4588999999999999999999998 99999999999999999999999999987654321
Q ss_pred CCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 921 DNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 921 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
......|+..|+|||.+....++.++|+||+|+++|+|++|+.||....
T Consensus 155 -------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 203 (258)
T cd05578 155 -------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHS 203 (258)
T ss_pred -------cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCC
Confidence 1123457889999999988889999999999999999999999998764
No 315
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.96 E-value=1.3e-28 Score=267.01 Aligned_cols=198 Identities=29% Similarity=0.485 Sum_probs=175.8
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEcc
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYL 842 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 842 (1001)
+|++.+.||+|++|.||+|+.. +++.||||++..... .+++.+|+..+++++|+||+++++++...+..++||||+
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYM 81 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEec
Confidence 5788899999999999999976 599999999866543 478999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 843 PNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHH-DCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 843 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~-~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
++++|.+++... ..+++..+.+++.|+++|++|+|+ . +++||||+|+||+++.++.++++|||.+........
T Consensus 82 ~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~- 155 (264)
T cd06623 82 DGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD- 155 (264)
T ss_pred CCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecccCCC-
Confidence 999999999864 458999999999999999999999 8 999999999999999999999999999887643211
Q ss_pred CCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
......++..|+|||.+....++.++|+||||+++|+|++|+.||....
T Consensus 156 ------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~ 204 (264)
T cd06623 156 ------QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPG 204 (264)
T ss_pred ------cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence 1123467889999999988899999999999999999999999997764
No 316
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.96 E-value=8.6e-29 Score=270.14 Aligned_cols=201 Identities=28% Similarity=0.407 Sum_probs=170.6
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-chhhHHHHHHHhhcc-CCCceeeEEeeeecCC------ce
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-ESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKN------LK 835 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~~------~~ 835 (1001)
.++|++.+.||+|+||.||+|+.+ +++.||+|.+.... ..+++.+|+.+++++ +|+||+++++++.... ..
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 84 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQL 84 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEE
Confidence 478999999999999999999975 57899999886543 346789999999999 7999999999986544 48
Q ss_pred EEEEEccCCCCHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccc
Q 001873 836 LLFYDYLPNGSLSSLLHGAG--KGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLAR 913 (1001)
Q Consensus 836 ~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~ 913 (1001)
++||||+++++|.++++... ...+++..+..++.|++.|++|||+. +++||||+|+||++++++.+|++|||.+.
T Consensus 85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~~~~~ 161 (275)
T cd06608 85 WLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFGVSA 161 (275)
T ss_pred EEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCCccce
Confidence 99999999999999987543 45678999999999999999999998 99999999999999999999999999987
Q ss_pred cccCCCCCCCCCCCCCCcccccccccCcccccc-----CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 914 IVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM-----QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
...... .......|+..|+|||++.. ..++.++||||+|+++|+|++|+.||...
T Consensus 162 ~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 221 (275)
T cd06608 162 QLDSTL-------GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDM 221 (275)
T ss_pred ecccch-------hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCcccc
Confidence 653221 11223468899999998743 45678999999999999999999999754
No 317
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.96 E-value=1.3e-28 Score=267.73 Aligned_cols=196 Identities=21% Similarity=0.302 Sum_probs=156.8
Q ss_pred CeEeecCCeeEEEEEeCCC---CEEEEEEecCCC---chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCCC
Q 001873 772 NVIGTGSSGVVYRVTIPNG---ETLAVKKMWSSD---ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNG 845 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~~~---~~vavK~~~~~~---~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 845 (1001)
++||+|+||+||+++..++ ..+++|.+.... ..+.+.+|+..++.++||||+++++.+.+....++||||+++|
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 3589999999999975433 356677664332 2367899999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCC--CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCC
Q 001873 846 SLSSLLHGAGK--GGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNC 923 (1001)
Q Consensus 846 sL~~~l~~~~~--~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~ 923 (1001)
+|.+++++... ...++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~--- 154 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY--- 154 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchh---
Confidence 99999976422 3356677788999999999999998 999999999999999999999999999864321110
Q ss_pred CCCCCCCcccccccccCcccccc-------CCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 924 SKTNQRPQLAGSYGYMAPEHASM-------QRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 924 ~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
........|+..|+|||++.. ..++.++||||||+++|||++ |..||...
T Consensus 155 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~ 212 (268)
T cd05086 155 --IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHL 212 (268)
T ss_pred --hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Confidence 111123467889999998743 345779999999999999997 56788643
No 318
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.96 E-value=1.1e-28 Score=267.38 Aligned_cols=196 Identities=29% Similarity=0.399 Sum_probs=158.5
Q ss_pred CeEeecCCeeEEEEEeC----CCCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeee-cCCceEEEEEccC
Q 001873 772 NVIGTGSSGVVYRVTIP----NGETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGS-NKNLKLLFYDYLP 843 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~-~~~~~~lv~e~~~ 843 (1001)
+.||+|+||+||+|+.. ++..||+|++..... .+.+.+|+.+++.++||||+++++++. .++..++||||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999853 245799998754332 357888999999999999999999765 4556789999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCC
Q 001873 844 NGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNC 923 (1001)
Q Consensus 844 ~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~ 923 (1001)
+|+|.+++.+.. ...++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||+++.+......
T Consensus 81 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~-- 154 (262)
T cd05058 81 HGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY-- 154 (262)
T ss_pred CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCcce--
Confidence 999999997642 3357778888999999999999998 9999999999999999999999999999765322110
Q ss_pred CCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhC-CCCCCC
Q 001873 924 SKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTG-RHPLDP 974 (1001)
Q Consensus 924 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg-~~Pf~~ 974 (1001)
.........++..|+|||.+....++.++|||||||++|||++| ..||..
T Consensus 155 -~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~ 205 (262)
T cd05058 155 -SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 205 (262)
T ss_pred -eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCC
Confidence 01111223467789999999888999999999999999999995 555653
No 319
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.96 E-value=1.2e-28 Score=274.28 Aligned_cols=210 Identities=26% Similarity=0.342 Sum_probs=172.4
Q ss_pred cccHHHHHhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc----hhhHHHHHHHhhccCCCceeeEEeeeecC
Q 001873 758 DFSIDDVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE----SGAFSSEIQTLGSIRHKNIVRLLGWGSNK 832 (1001)
Q Consensus 758 ~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~ 832 (1001)
++++.+..++|++.+.||+|+||.||+|+.. +++.||||++..... ...+.+|+.++++++||||+++++++...
T Consensus 4 ~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 83 (310)
T cd07865 4 EFPFCDEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTK 83 (310)
T ss_pred cCcccchhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecc
Confidence 4556677789999999999999999999865 689999998854322 23567899999999999999999987654
Q ss_pred C--------ceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcE
Q 001873 833 N--------LKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQA 904 (1001)
Q Consensus 833 ~--------~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 904 (1001)
+ ..++||||+. +++.+++... ...+++.++..++.|++.|++|||++ +++||||||+||+++.++.+
T Consensus 84 ~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~ 158 (310)
T cd07865 84 ATPYNRYKGSFYLVFEFCE-HDLAGLLSNK-NVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGIL 158 (310)
T ss_pred cccccCCCceEEEEEcCCC-cCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcE
Confidence 4 4499999996 5888888654 23579999999999999999999998 99999999999999999999
Q ss_pred EEecccccccccCCCCCCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 905 YLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 905 ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
||+|||.+..+....... ........++..|+|||.+.+ ..++.++||||+|+++|||++|+.||.+.
T Consensus 159 kl~dfg~~~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~ 227 (310)
T cd07865 159 KLADFGLARAFSLSKNSK---PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGN 227 (310)
T ss_pred EECcCCCcccccCCcccC---CCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 999999998764332211 111223467889999998765 44788999999999999999999999754
No 320
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.96 E-value=4.2e-29 Score=274.40 Aligned_cols=198 Identities=24% Similarity=0.402 Sum_probs=169.4
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYD 840 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e 840 (1001)
++|++.+.||+|+||.||+|.++ +++.||+|++.... ..+.+.+|++++++++||||+++++++..++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 36888899999999999999976 58999999875432 23568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCC
Q 001873 841 YLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGD 920 (1001)
Q Consensus 841 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~ 920 (1001)
|++++++..+.... ..+++..+..++.|+++|++|||+. +++||||+|+||++++++.++++|||++.......
T Consensus 81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~- 154 (286)
T cd07846 81 FVDHTVLDDLEKYP--NGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG- 154 (286)
T ss_pred cCCccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc-
Confidence 99999998887643 3479999999999999999999998 99999999999999999999999999988654321
Q ss_pred CCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 921 DNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 921 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.......++..|+|||++.+ ..++.++||||||+++|||++|+.||...
T Consensus 155 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~ 204 (286)
T cd07846 155 ------EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGD 204 (286)
T ss_pred ------cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCC
Confidence 11122457889999998865 45788999999999999999999998643
No 321
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.96 E-value=1.6e-28 Score=266.97 Aligned_cols=197 Identities=27% Similarity=0.431 Sum_probs=164.7
Q ss_pred cCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC--chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCCC
Q 001873 769 TSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD--ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNG 845 (1001)
Q Consensus 769 ~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 845 (1001)
.....||+|+||.||+|+.. ++..||+|.+.... ..+.+.+|+.++++++|+||+++++++..++..++|+||++++
T Consensus 11 ~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 90 (268)
T cd06624 11 GERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGG 90 (268)
T ss_pred CceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCC
Confidence 34457999999999999865 57889999876543 3367899999999999999999999999999999999999999
Q ss_pred CHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECC-CCcEEEecccccccccCCCCCCC
Q 001873 846 SLSSLLHGAG-KGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGP-GYQAYLADFGLARIVSGSGDDNC 923 (1001)
Q Consensus 846 sL~~~l~~~~-~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~-~~~~ki~Dfgla~~~~~~~~~~~ 923 (1001)
+|.++++... ....++..+..++.|++.|++|||++ +|+||||||+||+++. ++.+||+|||.+.......
T Consensus 91 ~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~---- 163 (268)
T cd06624 91 SLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGIN---- 163 (268)
T ss_pred CHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhheecccCC----
Confidence 9999998642 21227788888999999999999998 9999999999999986 6799999999987653211
Q ss_pred CCCCCCCcccccccccCccccccC--CCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 924 SKTNQRPQLAGSYGYMAPEHASMQ--RITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 924 ~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.......|++.|+|||++... .++.++||||+|+++|+|++|+.||...
T Consensus 164 ---~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~ 214 (268)
T cd06624 164 ---PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIEL 214 (268)
T ss_pred ---CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccc
Confidence 111223578999999998653 4788999999999999999999999754
No 322
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.96 E-value=1.6e-28 Score=264.21 Aligned_cols=196 Identities=28% Similarity=0.409 Sum_probs=166.6
Q ss_pred CeEeecCCeeEEEEEeCCCCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCCCCHH
Q 001873 772 NVIGTGSSGVVYRVTIPNGETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLS 848 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 848 (1001)
++||+|+||.||++...+++.||+|++..... .+.+.+|++++++++||||+++++++.+....++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 46899999999999987799999998865432 357889999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCCCCCC
Q 001873 849 SLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQ 928 (1001)
Q Consensus 849 ~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~~~~ 928 (1001)
+++.+. ....++..+..++.+++.|++|||++ +++||||||+||+++.++.+||+|||.+......... ..
T Consensus 81 ~~l~~~-~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~-----~~ 151 (251)
T cd05041 81 TFLRKK-KNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYT-----VS 151 (251)
T ss_pred HHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcce-----ec
Confidence 999764 23578899999999999999999998 9999999999999999999999999999865321110 00
Q ss_pred CCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 929 RPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 929 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
.....++..|+|||.+.+..++.++||||+|+++|||+| |+.||....
T Consensus 152 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~ 200 (251)
T cd05041 152 DGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMS 200 (251)
T ss_pred cccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCC
Confidence 111234567999999988889999999999999999999 888886543
No 323
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.96 E-value=4.8e-29 Score=270.64 Aligned_cols=197 Identities=30% Similarity=0.437 Sum_probs=172.6
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC---chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEcc
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD---ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYL 842 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 842 (1001)
+|+..+.||+|+||.||++..+ +++.||+|++.... ..+++.+|++++++++||||+++++++......++|+||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 5777889999999999999976 68999999886543 2357889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 843 PNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHH-DCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 843 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~-~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
++++|.+++.... ..+++..+.+++.|++.|++|+|+ . +++||||||+||++++++.++|+|||.+........
T Consensus 82 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~- 156 (265)
T cd06605 82 DGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA- 156 (265)
T ss_pred CCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh-
Confidence 9999999998653 557889999999999999999999 7 999999999999999999999999999876532211
Q ss_pred CCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
....++..|+|||.+.+..++.++||||+|+++|+|++|+.||....
T Consensus 157 --------~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~ 203 (265)
T cd06605 157 --------KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPEN 203 (265)
T ss_pred --------hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccc
Confidence 11468889999999988899999999999999999999999997653
No 324
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.96 E-value=1.3e-28 Score=269.30 Aligned_cols=197 Identities=26% Similarity=0.422 Sum_probs=169.9
Q ss_pred cccCCCeEeecCCeeEEEEEe-CCCCEEEEEEecCCC---chhhHHHHHHHhhccC---CCceeeEEeeeecCCceEEEE
Q 001873 767 NLTSANVIGTGSSGVVYRVTI-PNGETLAVKKMWSSD---ESGAFSSEIQTLGSIR---HKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~Ei~~l~~l~---h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
.|+..+.||+|+||.||+|.+ .+++.||+|.+.... ..+++.+|+.++++++ ||||+++++++.+....++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 477788999999999999986 478999999885432 3357889999999996 999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
||+++++|.++++.. .+++..+..++.|++.|+.|||+. +|+||||+|+||+++.++.++|+|||.+.......
T Consensus 82 e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06917 82 EYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS 155 (277)
T ss_pred ecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc
Confidence 999999999998752 578999999999999999999998 99999999999999999999999999998764322
Q ss_pred CCCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
.......|+..|+|||.+.+ ..++.++||||||+++|+|++|+.||+...
T Consensus 156 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~ 206 (277)
T cd06917 156 -------SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVD 206 (277)
T ss_pred -------cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCC
Confidence 11223468899999998865 456899999999999999999999997653
No 325
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.96 E-value=6.5e-29 Score=270.29 Aligned_cols=196 Identities=30% Similarity=0.422 Sum_probs=164.2
Q ss_pred CeEeecCCeeEEEEEeCC-------CCEEEEEEecCCC---chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 772 NVIGTGSSGVVYRVTIPN-------GETLAVKKMWSSD---ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~~-------~~~vavK~~~~~~---~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
+.||+|+||.||+|+..+ ++.||+|.+.... ....+.+|+.+++.++||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999998642 2579999875432 346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCC-----CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCC-----cEEEecccc
Q 001873 842 LPNGSLSSLLHGAG-----KGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGY-----QAYLADFGL 911 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~-----~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~-----~~ki~Dfgl 911 (1001)
+++++|.+++++.. ...+++.++..++.|++.|++|||+. +++|+||||+||+++.++ .++++|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 99999999997532 23468899999999999999999998 999999999999999877 899999999
Q ss_pred cccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 001873 912 ARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPT 975 (1001)
Q Consensus 912 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~ 975 (1001)
++.+...... .......++..|+|||.+....++.++|||||||++|||++ |+.||...
T Consensus 158 ~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~ 217 (269)
T cd05044 158 ARDIYKSDYY-----RKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPAL 217 (269)
T ss_pred cccccccccc-----ccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCccc
Confidence 9865432111 11122345778999999998899999999999999999998 99998644
No 326
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.96 E-value=1.5e-28 Score=271.27 Aligned_cols=199 Identities=25% Similarity=0.334 Sum_probs=167.5
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYD 840 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e 840 (1001)
++|++.+.||+|++|.||+|+.. ++++||+|++.... ..+.+.+|++++++++||||+++++++.+....++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46888999999999999999875 68999999885432 22568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECC-CCcEEEecccccccccCCC
Q 001873 841 YLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGP-GYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 841 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~-~~~~ki~Dfgla~~~~~~~ 919 (1001)
|++ +++.+++........++..+..++.||+.|++|||++ +++||||||+||+++. ++.+||+|||++.......
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~ 157 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV 157 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCCCc
Confidence 996 6888888665444568888889999999999999998 9999999999999985 5679999999997643211
Q ss_pred CCCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.......+++.|+|||++.+ ..++.++||||+|+++|+|+||+.||...
T Consensus 158 -------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~ 207 (294)
T PLN00009 158 -------RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGD 207 (294)
T ss_pred -------cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 11122357889999998865 46789999999999999999999999754
No 327
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.96 E-value=1.4e-28 Score=270.79 Aligned_cols=197 Identities=26% Similarity=0.319 Sum_probs=167.5
Q ss_pred cccCCCeEeecCCeeEEEEEe----CCCCEEEEEEecCCC------chhhHHHHHHHhhcc-CCCceeeEEeeeecCCce
Q 001873 767 NLTSANVIGTGSSGVVYRVTI----PNGETLAVKKMWSSD------ESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLK 835 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~----~~~~~vavK~~~~~~------~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~~~~ 835 (1001)
.|++.+.||+|+||.||.|+. .+|+.||+|++.... ..+.+.+|+++++++ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 377889999999999999885 368999999885422 225678899999999 599999999999988899
Q ss_pred EEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccc
Q 001873 836 LLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIV 915 (1001)
Q Consensus 836 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~ 915 (1001)
++||||+++++|.+++... ..+++..+..++.|++.|+.|||+. +++||||||+||++++++.+||+|||+++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 155 (290)
T cd05613 81 HLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEF 155 (290)
T ss_pred EEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCccceec
Confidence 9999999999999999764 3478888899999999999999998 9999999999999999999999999999765
Q ss_pred cCCCCCCCCCCCCCCcccccccccCcccccc--CCCCCccchHHHHHHHHHHHhCCCCCCC
Q 001873 916 SGSGDDNCSKTNQRPQLAGSYGYMAPEHASM--QRITEKSDVYSFGVVLLEVLTGRHPLDP 974 (1001)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~SlG~il~elltg~~Pf~~ 974 (1001)
..... .......|+..|+|||.+.. ..++.++||||||+++|+|++|+.||..
T Consensus 156 ~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~ 210 (290)
T cd05613 156 HEDEV------ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTV 210 (290)
T ss_pred ccccc------cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCc
Confidence 32211 11223468899999999865 3467899999999999999999999974
No 328
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.96 E-value=1.9e-28 Score=267.04 Aligned_cols=199 Identities=33% Similarity=0.495 Sum_probs=168.8
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC------------chhhHHHHHHHhhccCCCceeeEEeeeecCC
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD------------ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKN 833 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~------------~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~ 833 (1001)
+|...+.||+|+||.||+|... +++.||+|.+.... ..+.+.+|+.++++++||||+++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4778889999999999999854 68999999874311 0135778999999999999999999999999
Q ss_pred ceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccc
Q 001873 834 LKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLAR 913 (1001)
Q Consensus 834 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~ 913 (1001)
..++||||+++++|.+++++. ..+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++++|||+++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~~~ 156 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGISK 156 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeeccccc
Confidence 999999999999999999865 3578888999999999999999998 99999999999999999999999999987
Q ss_pred cccCCCCCCCCCCCCCCcccccccccCccccccCC--CCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 914 IVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQR--ITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
....... ........|+..|+|||...... ++.++|+||+|+++||+++|+.||...
T Consensus 157 ~~~~~~~-----~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~ 215 (272)
T cd06629 157 KSDDIYD-----NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDE 215 (272)
T ss_pred ccccccc-----ccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCc
Confidence 6432111 11123346889999999987644 789999999999999999999999643
No 329
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.96 E-value=6.7e-29 Score=279.29 Aligned_cols=200 Identities=26% Similarity=0.345 Sum_probs=166.8
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC---chhhHHHHHHHhhccCCCceeeEEeeeecC-----Cce
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD---ESGAFSSEIQTLGSIRHKNIVRLLGWGSNK-----NLK 835 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~-----~~~ 835 (1001)
.++|++.+.||+|+||.||+|... +++.||||++.... ....+.+|+.++++++||||+++++++... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 468999999999999999999864 68999999985322 235688899999999999999999876544 357
Q ss_pred EEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccc
Q 001873 836 LLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIV 915 (1001)
Q Consensus 836 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~ 915 (1001)
++|+||++ +++.+++.. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 84 ~lv~e~~~-~~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~ 156 (336)
T cd07849 84 YIVQELME-TDLYKLIKT---QHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLARIA 156 (336)
T ss_pred EEEehhcc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccceeec
Confidence 89999996 588888763 4589999999999999999999998 9999999999999999999999999999875
Q ss_pred cCCCCCCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 916 SGSGDDNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
...... ........||+.|+|||.+.+ ..++.++||||+||++|+|++|+.||...
T Consensus 157 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~ 213 (336)
T cd07849 157 DPEHDH----TGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGK 213 (336)
T ss_pred cccccc----cCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 432211 112233568999999998654 56889999999999999999999999653
No 330
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.96 E-value=1.1e-28 Score=271.42 Aligned_cols=198 Identities=28% Similarity=0.394 Sum_probs=170.4
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC----CchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS----DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
+|++.+.||+|+||.||+|..+ +++.||||++... ...+.+.+|++++++++|+||+++++++..++..++||||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 6888999999999999999876 5889999987542 2236788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
++++.+..+.... ..+++..+..++.|++.|+.|||+. +++||||+|+||++++++.+||+|||.+........
T Consensus 82 ~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~- 155 (288)
T cd07833 82 VERTLLELLEASP--GGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRARPA- 155 (288)
T ss_pred CCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc-
Confidence 9987777666542 3478999999999999999999998 999999999999999999999999999987643321
Q ss_pred CCCCCCCCCcccccccccCccccccC-CCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASMQ-RITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.......++..|+|||++.+. .++.++||||+|+++|+|++|+.||...
T Consensus 156 -----~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~ 205 (288)
T cd07833 156 -----SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGD 205 (288)
T ss_pred -----ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 112234678899999999877 8899999999999999999999999754
No 331
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.96 E-value=1.6e-28 Score=272.70 Aligned_cols=197 Identities=31% Similarity=0.384 Sum_probs=168.0
Q ss_pred HHHhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhccCCCceeeEEeeeecCCceE
Q 001873 763 DVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKL 836 (1001)
Q Consensus 763 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~ 836 (1001)
+..+.|+..+.||+|+||+||+|+.. +++.||+|++.... ..+++.+|++++++++||||+++.+++.+.+..+
T Consensus 12 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~ 91 (307)
T cd06607 12 DPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAW 91 (307)
T ss_pred CcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEE
Confidence 34467899999999999999999865 68999999885332 1246889999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEeccccccccc
Q 001873 837 LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVS 916 (1001)
Q Consensus 837 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~ 916 (1001)
+||||++ |++.+++... ...+++..+..++.|++.|+.|||+. +|+||||+|+||+++.++.+||+|||++....
T Consensus 92 lv~e~~~-g~l~~~~~~~-~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~ 166 (307)
T cd06607 92 LVMEYCL-GSASDILEVH-KKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVS 166 (307)
T ss_pred EEHHhhC-CCHHHHHHHc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecC
Confidence 9999997 6777777543 23479999999999999999999998 99999999999999999999999999987543
Q ss_pred CCCCCCCCCCCCCCcccccccccCccccc---cCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 917 GSGDDNCSKTNQRPQLAGSYGYMAPEHAS---MQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 917 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.. ....|++.|+|||++. ...++.++||||||+++|||+||+.||...
T Consensus 167 ~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~ 217 (307)
T cd06607 167 PA-----------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM 217 (307)
T ss_pred CC-----------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCc
Confidence 21 1235788999999874 466889999999999999999999998753
No 332
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.96 E-value=2.1e-28 Score=268.57 Aligned_cols=197 Identities=28% Similarity=0.399 Sum_probs=170.2
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC--chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEcc
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD--ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYL 842 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 842 (1001)
..|...+.||+|++|.||++... +++.||+|++.... ..+.+.+|+.+++.++||||+++++++...+..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~ 98 (285)
T cd06648 19 SYLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFL 98 (285)
T ss_pred HhhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEecc
Confidence 34556679999999999999864 68999999875433 2356889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCC
Q 001873 843 PNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922 (1001)
Q Consensus 843 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~ 922 (1001)
++++|.+++.. ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++++|||.+.......
T Consensus 99 ~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~--- 169 (285)
T cd06648 99 EGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV--- 169 (285)
T ss_pred CCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCC---
Confidence 99999999976 3478899999999999999999998 99999999999999999999999999887543211
Q ss_pred CCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 923 CSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 923 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.......|++.|+|||...+..++.++||||+|+++|||++|+.||...
T Consensus 170 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~ 218 (285)
T cd06648 170 ----PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNE 218 (285)
T ss_pred ----cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCC
Confidence 1122346889999999998888999999999999999999999998653
No 333
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=5.2e-31 Score=257.36 Aligned_cols=210 Identities=27% Similarity=0.348 Sum_probs=173.8
Q ss_pred ccHHHHHhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCch----hhHHHHHHHhhccCCCceeeEEeeeec--
Q 001873 759 FSIDDVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDES----GAFSSEIQTLGSIRHKNIVRLLGWGSN-- 831 (1001)
Q Consensus 759 ~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~----~~~~~Ei~~l~~l~h~nIv~l~~~~~~-- 831 (1001)
++..+....|+...+||+|.||+||+|+.+ .|+.||+|++..+.+. ....+|+.++..++|+|++.+++.|..
T Consensus 10 ~P~~~~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~ 89 (376)
T KOG0669|consen 10 EPFCDEVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKA 89 (376)
T ss_pred CCceecchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhcc
Confidence 344455667888889999999999999976 5788999987554433 467799999999999999999987642
Q ss_pred ------CCceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEE
Q 001873 832 ------KNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAY 905 (1001)
Q Consensus 832 ------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 905 (1001)
....|+||++|+ .+|.-++... ...++..++.+++.++..|+.|+|+. .|+|||+||.|++|+.+|.+|
T Consensus 90 Tp~~r~r~t~ylVf~~ce-hDLaGlLsn~-~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilk 164 (376)
T KOG0669|consen 90 TPTNRDRATFYLVFDFCE-HDLAGLLSNR-KVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILK 164 (376)
T ss_pred CCcccccceeeeeHHHhh-hhHHHHhcCc-cccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEE
Confidence 345799999997 6899888754 45689999999999999999999998 999999999999999999999
Q ss_pred EecccccccccCCCCCCCCCCCCCCcccccccccCccccc-cCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 906 LADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHAS-MQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 906 i~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
|+|||+|+.+....+.. ....+..+-|.+|++||.+. .+.|+.+.|||+-||||.||+||.+-+.+..
T Consensus 165 lADFGlar~fs~~~n~~---kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnt 233 (376)
T KOG0669|consen 165 LADFGLARAFSTSKNVV---KPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNT 233 (376)
T ss_pred eeccccccceecccccC---CCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCCh
Confidence 99999998776543322 22344567799999999875 4789999999999999999999987666543
No 334
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.96 E-value=1.3e-28 Score=270.47 Aligned_cols=202 Identities=27% Similarity=0.383 Sum_probs=176.6
Q ss_pred HHHhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc-hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEE
Q 001873 763 DVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE-SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYD 840 (1001)
Q Consensus 763 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e 840 (1001)
+..+.|+..+.+|+|+||.||+|.++ +++.||+|++..... .+.+.+|++.+++++|+||+++++++...+..++|+|
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 95 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME 95 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence 44567888899999999999999976 689999999865443 5678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCC
Q 001873 841 YLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGD 920 (1001)
Q Consensus 841 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~ 920 (1001)
|+++++|.+++.... ..+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||.+........
T Consensus 96 ~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 171 (286)
T cd06614 96 YMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS 171 (286)
T ss_pred ccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhccchh
Confidence 999999999998753 3689999999999999999999998 999999999999999999999999999876532211
Q ss_pred CCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 921 DNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 921 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
......+++.|+|||.+.+..++.++||||||+++|+|++|+.||...
T Consensus 172 -------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~ 219 (286)
T cd06614 172 -------KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLRE 219 (286)
T ss_pred -------hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCC
Confidence 122335788999999998888999999999999999999999998754
No 335
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.96 E-value=2.5e-28 Score=266.83 Aligned_cols=189 Identities=23% Similarity=0.256 Sum_probs=157.8
Q ss_pred eEeecCCeeEEEEEeC-CCCEEEEEEecCCCc-----hhhHHHHHHH---hhccCCCceeeEEeeeecCCceEEEEEccC
Q 001873 773 VIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE-----SGAFSSEIQT---LGSIRHKNIVRLLGWGSNKNLKLLFYDYLP 843 (1001)
Q Consensus 773 ~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~Ei~~---l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~ 843 (1001)
.||+|+||+||++... +++.||+|.+..... ...+..|..+ ++...||+|+++.+++...+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999864 588999998754321 1223444433 444579999999999999999999999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCC
Q 001873 844 NGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNC 923 (1001)
Q Consensus 844 ~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~ 923 (1001)
||+|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 81 g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~----- 150 (278)
T cd05606 81 GGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKK----- 150 (278)
T ss_pred CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCcc-----
Confidence 99999998753 4589999999999999999999998 9999999999999999999999999998754321
Q ss_pred CCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 924 SKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 924 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
......|+..|+|||.+.+ ..++.++||||+|+++|||++|+.||...
T Consensus 151 ----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~ 199 (278)
T cd05606 151 ----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 199 (278)
T ss_pred ----CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCC
Confidence 1123468999999999874 46889999999999999999999999865
No 336
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.3e-30 Score=275.57 Aligned_cols=198 Identities=25% Similarity=0.326 Sum_probs=173.7
Q ss_pred hcccCCCeEeecCCeeEEEEEeCCCC-EEEEEEecCCC-----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIPNGE-TLAVKKMWSSD-----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~~~~-~vavK~~~~~~-----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
.+++++..||-|+||.|-+++..+.. .+|+|.+++.. ..+....|-.+|..++.|.||++|..|.++++.|+.|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 45666778999999999999875433 38888775432 2355778999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
|-|-||.++..+++.+ .++..+..-++..+..|++|||++ +||+|||||+|.+++.+|-+|+.|||.|+.+...
T Consensus 500 EaClGGElWTiLrdRg--~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g- 573 (732)
T KOG0614|consen 500 EACLGGELWTILRDRG--SFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG- 573 (732)
T ss_pred HhhcCchhhhhhhhcC--CcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhccC-
Confidence 9999999999999754 488888888999999999999999 9999999999999999999999999999987543
Q ss_pred CCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
...-+.+|||.|.|||++.++..+.++|.||+|+.+||+++|++||.+..
T Consensus 574 -------~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~d 623 (732)
T KOG0614|consen 574 -------RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVD 623 (732)
T ss_pred -------CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCc
Confidence 22345699999999999999999999999999999999999999998764
No 337
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.96 E-value=1.6e-28 Score=275.33 Aligned_cols=201 Identities=22% Similarity=0.268 Sum_probs=164.1
Q ss_pred eEeec--CCeeEEEEEeC-CCCEEEEEEecCCCc----hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCCC
Q 001873 773 VIGTG--SSGVVYRVTIP-NGETLAVKKMWSSDE----SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNG 845 (1001)
Q Consensus 773 ~lG~G--~fg~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g 845 (1001)
.||+| +||+||++++. +++.||||.+..... .+.+.+|+.+++.++||||+++++++..++..++||||++++
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 46666 99999999875 799999999864331 256888999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCCC
Q 001873 846 SLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSK 925 (1001)
Q Consensus 846 sL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~ 925 (1001)
++.+++.+.....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|++||+.+.............
T Consensus 85 ~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (328)
T cd08226 85 SANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVV 161 (328)
T ss_pred CHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccc
Confidence 999999876556689999999999999999999998 99999999999999999999999998664432221111111
Q ss_pred CCCCCcccccccccCcccccc--CCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 926 TNQRPQLAGSYGYMAPEHASM--QRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 926 ~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
........++..|+|||++.+ ..++.++||||+||++|||++|+.||....
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~ 214 (328)
T cd08226 162 YDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDML 214 (328)
T ss_pred ccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcC
Confidence 111112235677999999866 457899999999999999999999997653
No 338
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.96 E-value=2.1e-28 Score=268.98 Aligned_cols=197 Identities=27% Similarity=0.395 Sum_probs=168.6
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeec--CCceEEEEE
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSN--KNLKLLFYD 840 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~--~~~~~lv~e 840 (1001)
+|+..+.||.|++|.||++... +++.||+|.+..... ..++.+|++++++++||||+++++++.+ .+..++|||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 81 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME 81 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence 5777889999999999999975 588999998864332 3678899999999999999999998754 346799999
Q ss_pred ccCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCC
Q 001873 841 YLPNGSLSSLLHGA--GKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGS 918 (1001)
Q Consensus 841 ~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~ 918 (1001)
|+++++|.+++... ....+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 158 (287)
T cd06621 82 YCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS 158 (287)
T ss_pred ecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccccccccc
Confidence 99999999987642 234478889999999999999999998 9999999999999999999999999998764321
Q ss_pred CCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 919 GDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 919 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
. .....++..|+|||.+.+..++.++||||+|+++|+|++|+.||+..
T Consensus 159 ~---------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 206 (287)
T cd06621 159 L---------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPE 206 (287)
T ss_pred c---------cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcc
Confidence 1 11235788999999999889999999999999999999999999865
No 339
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.96 E-value=1.9e-28 Score=268.87 Aligned_cols=199 Identities=26% Similarity=0.400 Sum_probs=169.3
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC---chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEcc
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD---ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYL 842 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 842 (1001)
+|+..+.||+|++|.||+|+.. +++.||||++.... ..+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 4788899999999999999975 68999999886432 2356778999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 843 PNGSLSSLLHGAG-KGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 843 ~~gsL~~~l~~~~-~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
+ ++|.+++.... ...+++..+.+++.|++.|++|||+. +++||||||+||++++++.++++|||+++......
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~-- 154 (284)
T cd07836 81 D-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV-- 154 (284)
T ss_pred C-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc--
Confidence 8 58999887543 24579999999999999999999998 99999999999999999999999999997653211
Q ss_pred CCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
.......+++.|+|||++.+ ..++.++||||+|+++|+|++|+.||.+..
T Consensus 155 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~ 205 (284)
T cd07836 155 -----NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTN 205 (284)
T ss_pred -----cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 11122357889999998755 457889999999999999999999997653
No 340
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.96 E-value=1.6e-28 Score=269.39 Aligned_cols=203 Identities=28% Similarity=0.408 Sum_probs=171.6
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-----CCCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeec--CCce
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-----NGETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSN--KNLK 835 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-----~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~--~~~~ 835 (1001)
+.|+..+.||+|+||.||+|++. +++.||||.+..... .+++.+|+.++++++||||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 45778899999999999999853 368899999865544 4689999999999999999999999877 5578
Q ss_pred EEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccc
Q 001873 836 LLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIV 915 (1001)
Q Consensus 836 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~ 915 (1001)
++||||+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||.+...
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLAKVL 159 (284)
T ss_pred EEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEccccccccc
Confidence 99999999999999998653 2489999999999999999999998 9999999999999999999999999999876
Q ss_pred cCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 916 SGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
....... .......++..|+|||......++.++||||||+++|||+||+.||....
T Consensus 160 ~~~~~~~----~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~ 216 (284)
T cd05038 160 PEDKDYY----YVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPP 216 (284)
T ss_pred ccCCcce----eccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCccccc
Confidence 5322111 11112245567999999988889999999999999999999999987543
No 341
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.96 E-value=1.1e-28 Score=266.53 Aligned_cols=199 Identities=25% Similarity=0.368 Sum_probs=172.2
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC----CchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS----DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
+|+..+.||+|+||.||+|... ++..||+|.+... .+.+.+.+|++++++++|+||+++++.+...+..++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4778889999999999999875 5889999988543 3446788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCC-cEEEecccccccccCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGY-QAYLADFGLARIVSGSGD 920 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~-~~ki~Dfgla~~~~~~~~ 920 (1001)
+++++|.+++.+.....+++..+..++.|+++|+.|||+. +++|+||||+||++++++ .+|++|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~ 157 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME 157 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCCcc
Confidence 9999999999875555679999999999999999999998 999999999999999875 569999999876543211
Q ss_pred CCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 921 DNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 921 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
......|++.|+|||+.....++.++|+||||+++|||++|+.||...
T Consensus 158 -------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 205 (257)
T cd08225 158 -------LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGN 205 (257)
T ss_pred -------cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 112235889999999998888999999999999999999999999754
No 342
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.96 E-value=2e-28 Score=270.06 Aligned_cols=199 Identities=28% Similarity=0.316 Sum_probs=168.7
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc----hhhHHHHHHHhhccCCCceeeEEeeeecC--CceEE
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE----SGAFSSEIQTLGSIRHKNIVRLLGWGSNK--NLKLL 837 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~--~~~~l 837 (1001)
.++|+..+.||+|+||.||+|+.+ +++.||+|+++.... ...+.+|+.++++++||||+++++++... ...++
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~l 83 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYM 83 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEE
Confidence 357889999999999999999976 588999998864332 23567899999999999999999988776 88999
Q ss_pred EEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccC
Q 001873 838 FYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSG 917 (1001)
Q Consensus 838 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~ 917 (1001)
||||++ ++|.+++.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+.....
T Consensus 84 v~e~~~-~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 84 VMEYVE-HDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYGS 158 (293)
T ss_pred EehhcC-cCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence 999997 59999987643 3589999999999999999999998 999999999999999999999999999987643
Q ss_pred CCCCCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 918 SGDDNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 918 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.. .......+++.|+|||.+.+ ..++.++||||+|+++|||++|+.||...
T Consensus 159 ~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~ 210 (293)
T cd07843 159 PL-------KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGK 210 (293)
T ss_pred Cc-------cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 21 11122357889999998865 44688999999999999999999999754
No 343
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=4.3e-29 Score=252.63 Aligned_cols=198 Identities=22% Similarity=0.321 Sum_probs=174.3
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC-----CchhhHHHHHHHhhcc-CCCceeeEEeeeecCCceEE
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS-----DESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLL 837 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~~~~~l 837 (1001)
...|...++||+|+|++|..++++ +.+.||+|+++++ .+....+.|-.+.... +||.+|-+..+|..+...++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 467889999999999999999865 6788999988643 2335677788887666 79999999999999999999
Q ss_pred EEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccC
Q 001873 838 FYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSG 917 (1001)
Q Consensus 838 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~ 917 (1001)
|.||++||+|.-+++++ +.++++.++-+...|+-|+.|||++ |||+||+|.+||++|..|++|++|+|+++.--.
T Consensus 329 vieyv~ggdlmfhmqrq--rklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~l~ 403 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG 403 (593)
T ss_pred EEEEecCcceeeehhhh--hcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcCCC
Confidence 99999999998888764 4589999998999999999999999 999999999999999999999999999986322
Q ss_pred CCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCC
Q 001873 918 SGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974 (1001)
Q Consensus 918 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~ 974 (1001)
......+.+|||.|.|||++.+..|+..+|-|++||+|+||+.|+.||+.
T Consensus 404 -------~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdi 453 (593)
T KOG0695|consen 404 -------PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 453 (593)
T ss_pred -------CCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcce
Confidence 23345667999999999999999999999999999999999999999984
No 344
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.96 E-value=2.4e-28 Score=264.72 Aligned_cols=190 Identities=28% Similarity=0.363 Sum_probs=167.0
Q ss_pred EeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCCCCH
Q 001873 774 IGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSL 847 (1001)
Q Consensus 774 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 847 (1001)
||+|+||.||+++.. +++.||+|++.... ..+.+.+|+.++++++||||+++++++.++...++||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999975 48999999885432 236788999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCCCCC
Q 001873 848 SSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927 (1001)
Q Consensus 848 ~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~~~ 927 (1001)
.+++.+. ..+++..+..++.|+++|++|+|+. +++|+||||+||+++.++.++|+|||.++......
T Consensus 81 ~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-------- 147 (262)
T cd05572 81 WTILRDR--GLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-------- 147 (262)
T ss_pred HHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--------
Confidence 9999764 3478899999999999999999998 99999999999999999999999999998764321
Q ss_pred CCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 928 QRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 928 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
......|++.|+|||.+....++.++|+||+|+++|+|++|+.||....
T Consensus 148 ~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 196 (262)
T cd05572 148 KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDD 196 (262)
T ss_pred ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCC
Confidence 1223468899999999988889999999999999999999999998664
No 345
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.96 E-value=2.3e-28 Score=265.05 Aligned_cols=199 Identities=27% Similarity=0.418 Sum_probs=169.2
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeec--CCceEEEE
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSN--KNLKLLFY 839 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~--~~~~~lv~ 839 (1001)
+|++.+.||.|+||.||++... +++.||+|.+.... ..+++.+|++++++++||||+++++++.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4788899999999999999854 68899999885432 23568889999999999999999997753 45678999
Q ss_pred EccCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHh-----hCCCCCeEEeCCCCCCeEECCCCcEEEeccccc
Q 001873 840 DYLPNGSLSSLLHGA--GKGGADWEARYEVVLGVAHALAYLH-----HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLA 912 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~i~~~l~yLH-----~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla 912 (1001)
||+++++|.+++... ....+++..+..++.|++.|++|+| +. +++||||||+||++++++.+|++|||++
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~d~g~~ 157 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLGDFGLA 157 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEeccccc
Confidence 999999999999753 2345789999999999999999999 65 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 913 RIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
........ ......|++.|+|||++....++.++|+||||+++|+|++|+.||+..
T Consensus 158 ~~~~~~~~-------~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 213 (265)
T cd08217 158 KILGHDSS-------FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTAR 213 (265)
T ss_pred ccccCCcc-------cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCc
Confidence 87643211 122346889999999998888999999999999999999999999865
No 346
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.96 E-value=2.6e-28 Score=269.46 Aligned_cols=199 Identities=22% Similarity=0.266 Sum_probs=165.3
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccC-CCceeeEEeeeecCCc-----
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIR-HKNIVRLLGWGSNKNL----- 834 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~-h~nIv~l~~~~~~~~~----- 834 (1001)
++|++.+.||+|+||.||+|... +++.||||++.... ....+.+|+.++++++ ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 36888999999999999999965 68999999875432 2256888999999995 6999999998876655
Q ss_pred eEEEEEccCCCCHHHHhhcCC---CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECC-CCcEEEeccc
Q 001873 835 KLLFYDYLPNGSLSSLLHGAG---KGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGP-GYQAYLADFG 910 (1001)
Q Consensus 835 ~~lv~e~~~~gsL~~~l~~~~---~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~-~~~~ki~Dfg 910 (1001)
.++||||+++ +|.+++.... ...+++..+..++.||+.|+.|||++ +|+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeecc
Confidence 7999999985 8988886542 23579999999999999999999998 9999999999999998 8899999999
Q ss_pred ccccccCCCCCCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 911 LARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 911 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.++.+.... .......+++.|+|||++.+ ..++.++||||||+++|+|++|+.||...
T Consensus 157 ~~~~~~~~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~ 215 (295)
T cd07837 157 LGRAFSIPV-------KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGD 215 (295)
T ss_pred cceecCCCc-------cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Confidence 987653221 11122356889999998754 56789999999999999999999999754
No 347
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.96 E-value=7.3e-29 Score=268.09 Aligned_cols=188 Identities=24% Similarity=0.342 Sum_probs=156.9
Q ss_pred CeEeecCCeeEEEEEeCC--------CCEEEEEEecCCC--chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 772 NVIGTGSSGVVYRVTIPN--------GETLAVKKMWSSD--ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~~--------~~~vavK~~~~~~--~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
+.||+|+||+||+|..+. ..+||+|.+.... ..+++.+|+.+++.++||||+++++++...+..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 368999999999997632 2348888775432 235788899999999999999999999988889999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCc--------EEEecccccc
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQ--------AYLADFGLAR 913 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~--------~ki~Dfgla~ 913 (1001)
+++|+|.++++..+ ..+++..+.+++.||+.|++|||+. +|+||||||+||+++.++. ++++|||.+.
T Consensus 81 ~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 81 VKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred CCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 99999999998653 3578999999999999999999998 9999999999999987765 6899999886
Q ss_pred cccCCCCCCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCC-CCCCC
Q 001873 914 IVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGR-HPLDP 974 (1001)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~-~Pf~~ 974 (1001)
.... .....+++.|+|||++.+ ..++.++||||||+++|||++|. .||..
T Consensus 157 ~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~ 208 (258)
T cd05078 157 TVLP-----------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSA 208 (258)
T ss_pred ccCC-----------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhh
Confidence 5421 122357889999999876 45789999999999999999985 56554
No 348
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.96 E-value=2.9e-28 Score=270.90 Aligned_cols=199 Identities=31% Similarity=0.369 Sum_probs=167.2
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc----hhhHHHHHHHhhccCCCceeeEEeeeecC--CceEE
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE----SGAFSSEIQTLGSIRHKNIVRLLGWGSNK--NLKLL 837 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~--~~~~l 837 (1001)
.++|++.+.||+|+||.||+|+.. +++.||+|++..... ...+.+|+.++++++|+||+++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 467999999999999999999975 689999998854322 23467899999999999999999988654 46799
Q ss_pred EEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccC
Q 001873 838 FYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSG 917 (1001)
Q Consensus 838 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~ 917 (1001)
||||++ ++|.+++... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+.....
T Consensus 86 v~e~~~-~~l~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 86 VMEYCE-QDLASLLDNM-PTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTYGL 160 (309)
T ss_pred EEecCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence 999997 5898888754 24589999999999999999999998 999999999999999999999999999987643
Q ss_pred CCCCCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 918 SGDDNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 918 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.. .......+++.|+|||.+.+ ..++.++||||+||++|||++|+.||...
T Consensus 161 ~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~ 212 (309)
T cd07845 161 PA-------KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGK 212 (309)
T ss_pred cc-------CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 21 11122346788999998865 56789999999999999999999999754
No 349
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.96 E-value=1.8e-28 Score=269.77 Aligned_cols=198 Identities=27% Similarity=0.353 Sum_probs=163.5
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC---chhhHHHHHHHhhccC-CCceeeEEeeeecCCceEEEEEc
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD---ESGAFSSEIQTLGSIR-HKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~Ei~~l~~l~-h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
+|+..+.||+|+||.||++... +++.||+|++.... ....+.+|+.++.++. ||||+++++++..++..+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 4556678999999999999865 68999999886432 2356889999999996 99999999999888899999999
Q ss_pred cCCCCHHHHh---hcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCC
Q 001873 842 LPNGSLSSLL---HGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGS 918 (1001)
Q Consensus 842 ~~~gsL~~~l---~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~ 918 (1001)
+. +++.++. .......+++..+.+++.|++.|++|||+.+ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 85 MD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred cc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 86 4655543 3333456899999999999999999999742 8999999999999999999999999999765322
Q ss_pred CCCCCCCCCCCCcccccccccCccccccC---CCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 919 GDDNCSKTNQRPQLAGSYGYMAPEHASMQ---RITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 919 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
. ......|++.|+|||++... .++.++||||+||++|||++|+.||...
T Consensus 162 ~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 213 (288)
T cd06616 162 I--------AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKW 213 (288)
T ss_pred C--------ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhc
Confidence 1 11223578899999998765 6889999999999999999999999753
No 350
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.96 E-value=6.7e-28 Score=259.23 Aligned_cols=197 Identities=28% Similarity=0.423 Sum_probs=174.7
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC--chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccC
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD--ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLP 843 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~ 843 (1001)
.|+..+.||+|++|.||++... +++.||+|++.... ..+.+.+|++++++++||+|+++++++......++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 3777889999999999999975 68999999986655 45789999999999999999999999999999999999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCC
Q 001873 844 NGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNC 923 (1001)
Q Consensus 844 ~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~ 923 (1001)
+++|.+++.... ..+++..+..++.|++.|+.|||+. +++||||+|+||++++++.++|+|||.+........
T Consensus 81 ~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--- 153 (253)
T cd05122 81 GGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--- 153 (253)
T ss_pred CCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccccccccc---
Confidence 999999997642 4589999999999999999999998 999999999999999999999999999887643211
Q ss_pred CCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 924 SKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 924 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.....|+..|+|||.+....++.++||||+|+++|+|++|+.||...
T Consensus 154 -----~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 200 (253)
T cd05122 154 -----RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSEL 200 (253)
T ss_pred -----ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence 23346888999999998888999999999999999999999999765
No 351
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.96 E-value=3.6e-28 Score=266.55 Aligned_cols=197 Identities=27% Similarity=0.372 Sum_probs=168.4
Q ss_pred ccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEcc
Q 001873 768 LTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYL 842 (1001)
Q Consensus 768 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 842 (1001)
|++.+.||+|++|+||+|... +|+.||+|++.... ..+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 567889999999999999865 79999999885433 2256888999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCC
Q 001873 843 PNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922 (1001)
Q Consensus 843 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~ 922 (1001)
+ ++|.+++.......+++..+.+++.|+++|++|||+. +++||||+|+||+++.++.++|+|||.++......
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~--- 153 (283)
T cd07835 81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV--- 153 (283)
T ss_pred C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc---
Confidence 5 7999999876545689999999999999999999998 99999999999999999999999999997643211
Q ss_pred CCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 923 CSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 923 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.......+++.|+|||++.+ ..++.++||||+|+++|+|++|+.||...
T Consensus 154 ----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 203 (283)
T cd07835 154 ----RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGD 203 (283)
T ss_pred ----cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 11122356889999998765 45788999999999999999999999754
No 352
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.96 E-value=4.3e-28 Score=264.44 Aligned_cols=201 Identities=22% Similarity=0.365 Sum_probs=163.4
Q ss_pred ccCCCeEeecCCeeEEEEEeC----CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecCC------
Q 001873 768 LTSANVIGTGSSGVVYRVTIP----NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKN------ 833 (1001)
Q Consensus 768 ~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~------ 833 (1001)
|++.+.||+|+||.||+|.++ +++.||||++.... ..+++.+|++++++++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 567789999999999999753 36889999886532 2356889999999999999999999875432
Q ss_pred ceEEEEEccCCCCHHHHhhcCC----CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecc
Q 001873 834 LKLLFYDYLPNGSLSSLLHGAG----KGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADF 909 (1001)
Q Consensus 834 ~~~lv~e~~~~gsL~~~l~~~~----~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Df 909 (1001)
..++++||+++|+|.+++.... ...+++..+.+++.|++.|++|||+. +|+||||||+||+++.++.+|++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence 2368899999999998875321 22468888999999999999999998 9999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 001873 910 GLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTL 976 (1001)
Q Consensus 910 gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~ 976 (1001)
|.++....... ........+++.|++||......++.++||||||+++|||++ |+.||....
T Consensus 158 g~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~ 220 (273)
T cd05074 158 GLSKKIYSGDY-----YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVE 220 (273)
T ss_pred cccccccCCcc-----eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCC
Confidence 99986532211 011112245678999999988889999999999999999999 889987553
No 353
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.96 E-value=4.5e-29 Score=291.89 Aligned_cols=201 Identities=24% Similarity=0.393 Sum_probs=159.4
Q ss_pred HHHhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC---chhhHHHHHHHhhccCCCceeeEEeeeec-------
Q 001873 763 DVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD---ESGAFSSEIQTLGSIRHKNIVRLLGWGSN------- 831 (1001)
Q Consensus 763 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~------- 831 (1001)
....+|+..+.||+||||.||+++.+ ||+.||||++.... ....+.+|+..+++++|||||+++..|.+
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 34456777889999999999999977 89999999996553 22568899999999999999998731100
Q ss_pred --------------------------------------------------------------------------------
Q 001873 832 -------------------------------------------------------------------------------- 831 (1001)
Q Consensus 832 -------------------------------------------------------------------------------- 831 (1001)
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence
Q ss_pred ------------------------C--------CceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHh
Q 001873 832 ------------------------K--------NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH 879 (1001)
Q Consensus 832 ------------------------~--------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH 879 (1001)
+ ...||-||||+...+.+++++... .-.....++++++|+.|+.|+|
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~-~~~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHF-NSQRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhccc-chhhHHHHHHHHHHHHHHHHHH
Confidence 0 124678999998788888875321 1146778899999999999999
Q ss_pred hCCCCCeEEeCCCCCCeEECCCCcEEEeccccccccc----C-------CCCCCCCCCCCCCcccccccccCccccccC-
Q 001873 880 HDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVS----G-------SGDDNCSKTNQRPQLAGSYGYMAPEHASMQ- 947 (1001)
Q Consensus 880 ~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~----~-------~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~- 947 (1001)
++ |||||||||.||++++++.|||+|||+|.... . .+..........+..+||.-|+|||++.+.
T Consensus 715 ~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~ 791 (1351)
T KOG1035|consen 715 DQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS 791 (1351)
T ss_pred hC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc
Confidence 99 99999999999999999999999999998732 0 111122222355677999999999998664
Q ss_pred --CCCCccchHHHHHHHHHHHh
Q 001873 948 --RITEKSDVYSFGVVLLEVLT 967 (1001)
Q Consensus 948 --~~~~~~Dv~SlG~il~ellt 967 (1001)
.|+.|+||||+|+|++||+.
T Consensus 792 ~~~Yn~KiDmYSLGIVlFEM~y 813 (1351)
T KOG1035|consen 792 SNKYNSKIDMYSLGIVLFEMLY 813 (1351)
T ss_pred cccccchhhhHHHHHHHHHHhc
Confidence 59999999999999999974
No 354
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.96 E-value=2.8e-28 Score=271.79 Aligned_cols=201 Identities=21% Similarity=0.217 Sum_probs=164.1
Q ss_pred CCeEeecCCeeEEEEEeCCCCEEEEEEecCC----CchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCCCC
Q 001873 771 ANVIGTGSSGVVYRVTIPNGETLAVKKMWSS----DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGS 846 (1001)
Q Consensus 771 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~----~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs 846 (1001)
.+.+|.|+++.||+++. +++.||||++... ...+.+.+|++++++++||||+++++++.+.+..+++|||+++|+
T Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence 33445555555555544 6899999998643 223678999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCCCC
Q 001873 847 LSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKT 926 (1001)
Q Consensus 847 L~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~~ 926 (1001)
|.+++.......+++.....++.|+++|++|||++ +|+||||||+||+++.++.+||+|||.+..+...........
T Consensus 86 l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~ 162 (314)
T cd08216 86 CEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVH 162 (314)
T ss_pred HHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeeccccccccccc
Confidence 99999876555688999999999999999999998 999999999999999999999999999876543322111111
Q ss_pred CCCCcccccccccCcccccc--CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 927 NQRPQLAGSYGYMAPEHASM--QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 927 ~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.......++..|+|||++.. ..++.++||||+||++|||++|+.||...
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~ 213 (314)
T cd08216 163 DFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDM 213 (314)
T ss_pred cccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Confidence 22233457889999999865 45889999999999999999999999864
No 355
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.96 E-value=2.3e-28 Score=274.73 Aligned_cols=202 Identities=22% Similarity=0.304 Sum_probs=169.0
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeec----CCce
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSN----KNLK 835 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~----~~~~ 835 (1001)
.++|++.+.||+|+||.||+|... +++.||+|++.... ..+.+.+|+.++++++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 368999999999999999999865 69999999886432 23567789999999999999999987653 3467
Q ss_pred EEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccc
Q 001873 836 LLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIV 915 (1001)
Q Consensus 836 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~ 915 (1001)
++||||+. ++|.+++... ..+++..+..++.|++.|+.|||+. +|+||||||+||++++++.+||+|||.+...
T Consensus 84 ~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~ 157 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSD--QPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMARGL 157 (334)
T ss_pred EEEEehhh-hhHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccceee
Confidence 99999996 6899998754 3489999999999999999999998 9999999999999999999999999999876
Q ss_pred cCCCCCCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 916 SGSGDDNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
...... .........|+..|+|||.+.. ..++.++||||+||++|||++|+.||.+.
T Consensus 158 ~~~~~~---~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~ 215 (334)
T cd07855 158 SSSPTE---HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGK 215 (334)
T ss_pred cccCcC---CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCC
Confidence 432211 1112233478999999998755 56889999999999999999999999754
No 356
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1.7e-29 Score=262.44 Aligned_cols=216 Identities=20% Similarity=0.264 Sum_probs=182.0
Q ss_pred HHhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCch-hhHHHHHHHhhccC-C-Cc----eeeEEeeeecCCce
Q 001873 764 VVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDES-GAFSSEIQTLGSIR-H-KN----IVRLLGWGSNKNLK 835 (1001)
Q Consensus 764 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~Ei~~l~~l~-h-~n----Iv~l~~~~~~~~~~ 835 (1001)
+..+|++.+.+|+|.||+|....+. .+..||||+++.-... ++..-|+++++++. + |+ +|++.+||+..++.
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi 166 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI 166 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence 3789999999999999999987643 5789999999764433 56777999999993 3 32 78899999999999
Q ss_pred EEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECC---------------
Q 001873 836 LLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGP--------------- 900 (1001)
Q Consensus 836 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~--------------- 900 (1001)
|||+|.+ |-|+++++.......++...++.|+.|++++++|||+. +++|.||||+||++.+
T Consensus 167 Civfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~k~~~~~ 242 (415)
T KOG0671|consen 167 CIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNPKKKVCF 242 (415)
T ss_pred EEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEeccCCccce
Confidence 9999998 56999999998888899999999999999999999998 9999999999999832
Q ss_pred -----CCcEEEecccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 901 -----GYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 901 -----~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
+..+|++|||.|+... .....++.|..|+|||++.+-++++++||||+|||++|+.||...|...
T Consensus 243 ~r~~ks~~I~vIDFGsAtf~~----------e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtH 312 (415)
T KOG0671|consen 243 IRPLKSTAIKVIDFGSATFDH----------EHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTH 312 (415)
T ss_pred eccCCCcceEEEecCCcceec----------cCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccC
Confidence 2358999999998642 2335678999999999999999999999999999999999999877654
Q ss_pred CCCCcCcccchhhhhcccchhh
Q 001873 976 LPGGAPLVQWTPLMFLMLNLEA 997 (1001)
Q Consensus 976 ~~~~~~l~~~~~~~~~~~~~~~ 997 (1001)
++..+..+.-...||+|.
T Consensus 313 ----en~EHLaMMerIlGp~P~ 330 (415)
T KOG0671|consen 313 ----ENLEHLAMMERILGPIPS 330 (415)
T ss_pred ----CcHHHHHHHHHhhCCCcH
Confidence 355555555566666664
No 357
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.96 E-value=8.9e-28 Score=259.39 Aligned_cols=200 Identities=33% Similarity=0.460 Sum_probs=175.3
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecC--CceEEEE
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNK--NLKLLFY 839 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~--~~~~lv~ 839 (1001)
+|+..+.||+|++|.||+|... +++.|++|++.... ..+.+.+|+.++++++||||+++++.+.+. ...++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4677889999999999999976 68999999986554 246789999999999999999999999888 8899999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
||+++++|.+++.+.. .+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 155 (260)
T cd06606 81 EYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIE 155 (260)
T ss_pred EecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEeccccc
Confidence 9999999999998653 689999999999999999999998 99999999999999999999999999998765432
Q ss_pred CCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
.. .......++..|+|||......++.++||||+|+++|+|++|+.||....
T Consensus 156 ~~-----~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 207 (260)
T cd06606 156 TG-----EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG 207 (260)
T ss_pred cc-----ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 11 01233468889999999988889999999999999999999999998754
No 358
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.96 E-value=8.8e-28 Score=258.80 Aligned_cols=197 Identities=30% Similarity=0.456 Sum_probs=173.4
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
+|++.+.||+|++|.||+++.. ++++||+|.+.... ..+.+.+|++++++++|||++++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4788899999999999999865 67899999986554 336788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
+++++|.+++... ..+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.++|+|||.+........
T Consensus 81 ~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 154 (254)
T cd06627 81 AENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK- 154 (254)
T ss_pred CCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCcc-
Confidence 9999999999764 4589999999999999999999998 999999999999999999999999999987643221
Q ss_pred CCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
......++..|+|||......++.++||||+|+++|+|++|+.||...
T Consensus 155 ------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~ 202 (254)
T cd06627 155 ------DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDL 202 (254)
T ss_pred ------cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCc
Confidence 123346888999999988878899999999999999999999999753
No 359
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.96 E-value=3.7e-28 Score=273.51 Aligned_cols=204 Identities=26% Similarity=0.410 Sum_probs=169.5
Q ss_pred HHHhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC----CchhhHHHHHHHhhcc-CCCceeeEEeeeecC--Cc
Q 001873 763 DVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS----DESGAFSSEIQTLGSI-RHKNIVRLLGWGSNK--NL 834 (1001)
Q Consensus 763 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~--~~ 834 (1001)
.+.++|++.+.||+|+||.||+|... +++.||||++... .....+.+|+.+++++ +||||+++++++... ..
T Consensus 4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~ 83 (337)
T cd07852 4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKD 83 (337)
T ss_pred hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCce
Confidence 35678999999999999999999875 5889999987432 2235677899999999 999999999987643 36
Q ss_pred eEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEeccccccc
Q 001873 835 KLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARI 914 (1001)
Q Consensus 835 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~ 914 (1001)
.++||||++ ++|.+++... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++.
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~~ 156 (337)
T cd07852 84 IYLVFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARS 156 (337)
T ss_pred EEEEecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchhc
Confidence 799999997 6999998753 578888899999999999999998 999999999999999999999999999987
Q ss_pred ccCCCCCCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 915 VSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
........ .........||+.|+|||.+.. ..++.++||||||+++|+|++|+.||...
T Consensus 157 ~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~ 216 (337)
T cd07852 157 LSELEENP--ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGT 216 (337)
T ss_pred cccccccc--cCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCC
Confidence 64432211 1112233568999999998754 56788999999999999999999999654
No 360
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.95 E-value=5.3e-28 Score=263.17 Aligned_cols=199 Identities=27% Similarity=0.422 Sum_probs=167.3
Q ss_pred cccCCCeEeecCCeeEEEEEeCC--CCEEEEEEecCCC------------chhhHHHHHHHhhc-cCCCceeeEEeeeec
Q 001873 767 NLTSANVIGTGSSGVVYRVTIPN--GETLAVKKMWSSD------------ESGAFSSEIQTLGS-IRHKNIVRLLGWGSN 831 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~~~~~~------------~~~~~~~Ei~~l~~-l~h~nIv~l~~~~~~ 831 (1001)
.|++.+.||+|+||.||+|.... ++.+|||.+.... ...++.+|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 37788899999999999999764 7889999874221 12456778888765 799999999999999
Q ss_pred CCceEEEEEccCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecc
Q 001873 832 KNLKLLFYDYLPNGSLSSLLHGA--GKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADF 909 (1001)
Q Consensus 832 ~~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Df 909 (1001)
++..++||||+++++|.+++... ....+++..+++++.|++.|+.|||+.. +++||||||+||+++.++.+||+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK--RIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC--ceeecCCCHHHEEECCCCcEEEecc
Confidence 99999999999999999988542 2345788999999999999999999631 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 910 GLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 910 gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
|.+....... ......|+..|+|||.+.+..++.++||||||+++|||++|+.||...
T Consensus 159 g~~~~~~~~~--------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~ 216 (269)
T cd08528 159 GLAKQKQPES--------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYST 216 (269)
T ss_pred cceeeccccc--------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCccccc
Confidence 9998653221 122346888999999998888999999999999999999999998654
No 361
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=2.4e-30 Score=255.17 Aligned_cols=215 Identities=27% Similarity=0.353 Sum_probs=174.3
Q ss_pred ccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecC-----CceEE
Q 001873 768 LTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNK-----NLKLL 837 (1001)
Q Consensus 768 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~-----~~~~l 837 (1001)
.+..+.||.|+||.||.++++ +|+.||.|++..-. ..+.+.+|++++..++|+||+..++..... .+.|+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 455678999999999999875 79999999985432 237889999999999999999888765432 34578
Q ss_pred EEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccC
Q 001873 838 FYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSG 917 (1001)
Q Consensus 838 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~ 917 (1001)
++|.|. .+|.+++-.. ..++...++-+.+||++|++|||+. +|.||||||.|.+++.+..+||||||+|+....
T Consensus 135 ~TELmQ-SDLHKIIVSP--Q~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 135 LTELMQ-SDLHKIIVSP--QALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHHH-hhhhheeccC--CCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccch
Confidence 899996 6888888653 4467777778899999999999998 999999999999999999999999999997543
Q ss_pred CCCCCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcCcccchhhhhcccchh
Q 001873 918 SGDDNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLMLNLE 996 (1001)
Q Consensus 918 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~~~~~l~~~~~~~~~~~~~~ 996 (1001)
+ ....++..+-|..|+|||++.+ +.|+.+.||||+|||+.|++.++..|. ...++.|...+..+.|.++
T Consensus 209 d------~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQ----Aq~PiqQL~lItdLLGTPs 278 (449)
T KOG0664|consen 209 R------DRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQ----AAGPIEQLQMIIDLLGTPS 278 (449)
T ss_pred h------hhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhh----ccChHHHHHHHHHHhCCCc
Confidence 2 1223344467899999998865 789999999999999999999998666 4567777777777777554
Q ss_pred hh
Q 001873 997 AE 998 (1001)
Q Consensus 997 ~~ 998 (1001)
-|
T Consensus 279 ~E 280 (449)
T KOG0664|consen 279 QE 280 (449)
T ss_pred HH
Confidence 43
No 362
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.95 E-value=4.1e-28 Score=267.01 Aligned_cols=192 Identities=28% Similarity=0.402 Sum_probs=166.4
Q ss_pred CCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC--chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCCCCH
Q 001873 771 ANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD--ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSL 847 (1001)
Q Consensus 771 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 847 (1001)
..+||+|+||.||++..+ +++.||||++.... ....+.+|+.++++++|+||+++++++...+..++||||+++++|
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 357999999999999874 68999999875432 235688999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCCCCC
Q 001873 848 SSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927 (1001)
Q Consensus 848 ~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~~~ 927 (1001)
.+++.. ..+++..+..++.|++.|++|||+. +++||||||+||++++++.++|+|||.+....... .
T Consensus 105 ~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~-------~ 171 (292)
T cd06657 105 TDIVTH---TRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-------P 171 (292)
T ss_pred HHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceeccccc-------c
Confidence 998864 3478899999999999999999998 99999999999999999999999999887653211 1
Q ss_pred CCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 928 QRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 928 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
......|++.|+|||......++.++|+||+|+++|||++|+.||...
T Consensus 172 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~ 219 (292)
T cd06657 172 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 219 (292)
T ss_pred cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 122346889999999998888899999999999999999999999754
No 363
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.95 E-value=6.2e-28 Score=272.19 Aligned_cols=198 Identities=24% Similarity=0.333 Sum_probs=166.7
Q ss_pred HHHHHhcccCCCeEeecCCeeEEEEEe-CCCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecC---
Q 001873 761 IDDVVRNLTSANVIGTGSSGVVYRVTI-PNGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNK--- 832 (1001)
Q Consensus 761 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~--- 832 (1001)
+..+.++|++.+.||+|+||.||+|.. .+++.||+|++.... ..+.+.+|+.++++++||||+++++++...
T Consensus 12 ~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~ 91 (345)
T cd07877 12 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSL 91 (345)
T ss_pred HhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccc
Confidence 455668899999999999999999985 468999999986432 235678899999999999999999987532
Q ss_pred ---CceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecc
Q 001873 833 ---NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADF 909 (1001)
Q Consensus 833 ---~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Df 909 (1001)
...+++++++ +++|.++++. ..+++..+..++.|+++|++|||+. +|+||||||+||++++++.+||+||
T Consensus 92 ~~~~~~~lv~~~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~df 164 (345)
T cd07877 92 EEFNDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF 164 (345)
T ss_pred cccccEEEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCEEEecc
Confidence 3467888887 7899988864 3488999999999999999999998 9999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 910 GLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 910 gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
|+++.... ......|++.|+|||.+.+ ..++.++||||+||++|||++|+.||...
T Consensus 165 g~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 221 (345)
T cd07877 165 GLARHTDD----------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 221 (345)
T ss_pred cccccccc----------cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 99875421 1123467889999998765 56888999999999999999999999643
No 364
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.95 E-value=5.7e-28 Score=272.23 Aligned_cols=199 Identities=23% Similarity=0.333 Sum_probs=168.7
Q ss_pred cHHHHHhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc----hhhHHHHHHHhhccCCCceeeEEeeeecCC-
Q 001873 760 SIDDVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE----SGAFSSEIQTLGSIRHKNIVRLLGWGSNKN- 833 (1001)
Q Consensus 760 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~- 833 (1001)
++.++.++|++.+.||+|+||.||++... +++.||||++..... .+.+.+|+.++++++||||+++++++....
T Consensus 9 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 88 (343)
T cd07880 9 TIWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLS 88 (343)
T ss_pred hhhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcc
Confidence 45556788999999999999999999854 789999998854321 246789999999999999999999876543
Q ss_pred -----ceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEec
Q 001873 834 -----LKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLAD 908 (1001)
Q Consensus 834 -----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~D 908 (1001)
..++||||+ +++|.+++.. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|++|
T Consensus 89 ~~~~~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~d 161 (343)
T cd07880 89 LDRFHDFYLVMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILD 161 (343)
T ss_pred ccccceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEee
Confidence 458999999 7899988864 3588999999999999999999998 999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 909 FGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 909 fgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
||.+...... .....+++.|+|||.+.+ ..++.++|+||+|+++|++++|+.||...
T Consensus 162 fg~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~ 219 (343)
T cd07880 162 FGLARQTDSE----------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGH 219 (343)
T ss_pred cccccccccC----------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999764321 122357889999998865 46889999999999999999999999754
No 365
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.95 E-value=8e-28 Score=270.59 Aligned_cols=207 Identities=21% Similarity=0.261 Sum_probs=168.4
Q ss_pred HHhcccC-CCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCch----------------hhHHHHHHHhhccCCCceeeE
Q 001873 764 VVRNLTS-ANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDES----------------GAFSSEIQTLGSIRHKNIVRL 825 (1001)
Q Consensus 764 ~~~~~~~-~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~----------------~~~~~Ei~~l~~l~h~nIv~l 825 (1001)
+.++|.. .+.||+|+||+||+|... +++.||||++...... ..+.+|++++++++||||+++
T Consensus 6 ~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~ 85 (335)
T PTZ00024 6 ISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGL 85 (335)
T ss_pred cccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeee
Confidence 3456654 467999999999999865 6899999988543221 147789999999999999999
Q ss_pred EeeeecCCceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEE
Q 001873 826 LGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAY 905 (1001)
Q Consensus 826 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 905 (1001)
++++...+..++||||++ |+|.+++... ..+++.....++.|++.|++|||+. +|+||||||+||+++.++.+|
T Consensus 86 ~~~~~~~~~~~lv~e~~~-~~l~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~k 159 (335)
T PTZ00024 86 VDVYVEGDFINLVMDIMA-SDLKKVVDRK--IRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICK 159 (335)
T ss_pred eEEEecCCcEEEEEeccc-cCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEE
Confidence 999999999999999997 6999998753 3478999999999999999999998 999999999999999999999
Q ss_pred EecccccccccCCCCC-------CCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 906 LADFGLARIVSGSGDD-------NCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 906 i~Dfgla~~~~~~~~~-------~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
++|||.++........ ............+++.|+|||.+.+ ..++.++||||+||++|||++|+.||....
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~ 238 (335)
T PTZ00024 160 IADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGEN 238 (335)
T ss_pred ECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999866421110 0001112223357889999998865 346899999999999999999999997553
No 366
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.95 E-value=8.2e-28 Score=264.28 Aligned_cols=197 Identities=27% Similarity=0.343 Sum_probs=166.8
Q ss_pred ccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc----hhhHHHHHHHhhcc---CCCceeeEEeeeecCCc-----
Q 001873 768 LTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE----SGAFSSEIQTLGSI---RHKNIVRLLGWGSNKNL----- 834 (1001)
Q Consensus 768 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~Ei~~l~~l---~h~nIv~l~~~~~~~~~----- 834 (1001)
|++.+.||+|+||.||+|+.+ +++.||+|++..... ...+.+|+.+++++ +||||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567889999999999999986 489999999864322 24566788777666 59999999999887776
Q ss_pred eEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEeccccccc
Q 001873 835 KLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARI 914 (1001)
Q Consensus 835 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~ 914 (1001)
.+++|||+. ++|.+++.......+++..+..++.|+++|+.|||+. +++|+||+|+||+++.++.+||+|||.+..
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCccee
Confidence 899999997 5899998765445689999999999999999999998 999999999999999999999999999977
Q ss_pred ccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 915 VSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
+.... ......++..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 157 ~~~~~--------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~ 210 (287)
T cd07838 157 YSFEM--------ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTS 210 (287)
T ss_pred ccCCc--------ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCC
Confidence 53221 1122357889999999998889999999999999999999999997643
No 367
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.95 E-value=9.2e-28 Score=259.17 Aligned_cols=199 Identities=28% Similarity=0.403 Sum_probs=174.6
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC----CchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS----DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
+|++.+.||+|+||.||++... ++++||+|++... ...+.+.+|+++++.++|||++++.+.+...+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4778899999999999999975 6899999998654 2346788999999999999999999999988999999999
Q ss_pred cCCCCHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 842 LPNGSLSSLLHGAG--KGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~--~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
+++++|.+++.+.. ...+++..+..++.+++.|+.|||+. +++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999999998653 35689999999999999999999998 99999999999999999999999999997653321
Q ss_pred CCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.......|++.|+|||......++.++||||+|+++|+|++|+.||+..
T Consensus 158 -------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~ 206 (258)
T cd08215 158 -------DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGE 206 (258)
T ss_pred -------ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCC
Confidence 1222346889999999998888999999999999999999999999765
No 368
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.95 E-value=9e-28 Score=259.89 Aligned_cols=189 Identities=26% Similarity=0.349 Sum_probs=159.9
Q ss_pred CeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc-----hhhHHHHHHHh-hccCCCceeeEEeeeecCCceEEEEEccCC
Q 001873 772 NVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE-----SGAFSSEIQTL-GSIRHKNIVRLLGWGSNKNLKLLFYDYLPN 844 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~Ei~~l-~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 844 (1001)
+.||+|+||.||+|+.. +++.||||.+..... ...+..|..++ ...+|+||+++++++...+..++||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 46899999999999864 689999999854321 12344455443 445899999999999999999999999999
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCC
Q 001873 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924 (1001)
Q Consensus 845 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~ 924 (1001)
++|.++++.. ..+++..+..++.|++.|+.|||+. +++||||+|+||++++++.+||+|||.++....
T Consensus 82 ~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------- 149 (260)
T cd05611 82 GDCASLIKTL--GGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------- 149 (260)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc-------
Confidence 9999999764 3478899999999999999999998 999999999999999999999999999875421
Q ss_pred CCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 925 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
.....|++.|+|||.+.+..++.++||||+|+++|||++|..||....
T Consensus 150 ----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 197 (260)
T cd05611 150 ----NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAET 197 (260)
T ss_pred ----cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCC
Confidence 122357889999999988888999999999999999999999997543
No 369
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.95 E-value=5.8e-28 Score=268.82 Aligned_cols=206 Identities=28% Similarity=0.385 Sum_probs=167.7
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc----hhhHHHHHHHhhccCCCceeeEEeeeecC-------
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE----SGAFSSEIQTLGSIRHKNIVRLLGWGSNK------- 832 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~------- 832 (1001)
.++|++.+.||+|+||.||+|+.. +++.||||++..... ...+.+|++++++++||||+++++++.+.
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 578999999999999999999865 689999998853322 24678899999999999999999876433
Q ss_pred -CceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccc
Q 001873 833 -NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGL 911 (1001)
Q Consensus 833 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgl 911 (1001)
...++||||++ +++...+... ...+++..+..++.|+++|++|||+. +|+||||||+||++++++.+||+|||+
T Consensus 87 ~~~~~lv~~~~~-~~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~ 161 (311)
T cd07866 87 RGSVYMVTPYMD-HDLSGLLENP-SVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADFGL 161 (311)
T ss_pred CceEEEEEecCC-cCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcCcc
Confidence 34689999997 5777777653 34589999999999999999999998 999999999999999999999999999
Q ss_pred cccccCCCCCCCC----CCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 912 ARIVSGSGDDNCS----KTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 912 a~~~~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
++........... .........|++.|+|||.+.+ ..++.++||||+||++|||++|+.||.+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~ 230 (311)
T cd07866 162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGK 230 (311)
T ss_pred chhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCC
Confidence 9876443221110 1122234567899999998754 45889999999999999999999999754
No 370
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.95 E-value=9.4e-28 Score=263.10 Aligned_cols=194 Identities=25% Similarity=0.280 Sum_probs=162.4
Q ss_pred ccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC---chhhHHHHHHHhhccC-CCceeeEEeeeecC--CceEEEEE
Q 001873 768 LTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD---ESGAFSSEIQTLGSIR-HKNIVRLLGWGSNK--NLKLLFYD 840 (1001)
Q Consensus 768 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~Ei~~l~~l~-h~nIv~l~~~~~~~--~~~~lv~e 840 (1001)
|++.+.||+|+||.||+|+.. +++.||+|++.... ......+|+.+++++. |+||+++++++.+. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 567889999999999999865 68999999886432 2234557888998885 99999999998877 88999999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCC
Q 001873 841 YLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGD 920 (1001)
Q Consensus 841 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~ 920 (1001)
|++ |++.+++... ...+++..+..++.|++.|++|||+. +++||||||+||+++. +.+||+|||.++.......
T Consensus 81 ~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~ 154 (282)
T cd07831 81 LMD-MNLYELIKGR-KRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP 154 (282)
T ss_pred cCC-ccHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccccCCC
Confidence 997 5888888754 24579999999999999999999998 9999999999999999 9999999999986532211
Q ss_pred CCCCCCCCCCcccccccccCccccc-cCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 921 DNCSKTNQRPQLAGSYGYMAPEHAS-MQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 921 ~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.....+++.|+|||++. +..++.++||||+||++|||++|+.||...
T Consensus 155 --------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~ 202 (282)
T cd07831 155 --------YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGT 202 (282)
T ss_pred --------cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCC
Confidence 12235788999999764 456788999999999999999999999764
No 371
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.95 E-value=1.3e-27 Score=266.54 Aligned_cols=194 Identities=32% Similarity=0.392 Sum_probs=165.5
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
..|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+|++++++++|||++++++++.++...++||
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 104 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM 104 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence 44777889999999999999864 68999999885322 1246888999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
||++ |++.+.+... ...+++..+..++.|++.|+.|||+. +|+||||+|+||+++.++.+||+|||++.....
T Consensus 105 e~~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~-- 177 (317)
T cd06635 105 EYCL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASP-- 177 (317)
T ss_pred eCCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCC--
Confidence 9997 5888877543 34478999999999999999999998 999999999999999999999999998875421
Q ss_pred CCCCCCCCCCCcccccccccCccccc---cCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHAS---MQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.....|++.|+|||++. ...++.++|||||||++|||++|+.||...
T Consensus 178 ---------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~ 227 (317)
T cd06635 178 ---------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM 227 (317)
T ss_pred ---------cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCc
Confidence 12235888999999873 466889999999999999999999998754
No 372
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=5.3e-29 Score=269.36 Aligned_cols=194 Identities=23% Similarity=0.331 Sum_probs=169.0
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc----------hhhHHHHHHHhhccC---CCceeeEEeeeec
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE----------SGAFSSEIQTLGSIR---HKNIVRLLGWGSN 831 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~----------~~~~~~Ei~~l~~l~---h~nIv~l~~~~~~ 831 (1001)
..|+..+.+|+|+||.|+.+.++ +...|+||.+++++- -...-.||++|+.++ |+||++++++|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 35889999999999999999876 467788998865431 134667999999997 9999999999999
Q ss_pred CCceEEEEEcc-CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEeccc
Q 001873 832 KNLKLLFYDYL-PNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFG 910 (1001)
Q Consensus 832 ~~~~~lv~e~~-~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfg 910 (1001)
++++|++||-. +|.+|.+++... ..+++..+.-|++|++.|+++||++ +|||||||-+||.++.+|-+|++|||
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~k--p~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klidfg 715 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEFK--PRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLIDFG 715 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhcc--CccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEeecc
Confidence 99999999985 456999999864 4589999999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCCCCcccccccccCccccccCCC-CCccchHHHHHHHHHHHhCCCCCC
Q 001873 911 LARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRI-TEKSDVYSFGVVLLEVLTGRHPLD 973 (1001)
Q Consensus 911 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlG~il~elltg~~Pf~ 973 (1001)
.|..... ......+||.+|.|||++.+.+| +...|||++|+++|-++..+.||.
T Consensus 716 saa~~ks---------gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 716 SAAYTKS---------GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred chhhhcC---------CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9986533 23345689999999999999888 578899999999999999998875
No 373
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.95 E-value=4.4e-28 Score=265.34 Aligned_cols=205 Identities=22% Similarity=0.379 Sum_probs=175.3
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC-----CchhhHHHHHHHhhccC-CCceeeEEeeeecCCceEEEE
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS-----DESGAFSSEIQTLGSIR-HKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~Ei~~l~~l~-h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
+|++.+.||+|+||.||+|+.. +++.||+|.+... ...+.+.+|+.++++++ ||||+++++++...+..++||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL 81 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence 6888999999999999999865 6899999987542 22356888999999998 999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
||+++++|.+++.+.+ .+++..+..++.|++.|+.|||+. +++|+||||+||+++.++.++++|||++.......
T Consensus 82 e~~~~~~L~~~l~~~~--~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~ 156 (280)
T cd05581 82 EYAPNGELLQYIRKYG--SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNS 156 (280)
T ss_pred cCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccCCcc
Confidence 9999999999998643 589999999999999999999998 99999999999999999999999999998765432
Q ss_pred CCCCC-------------CCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 920 DDNCS-------------KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 920 ~~~~~-------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
..... .........|+..|+|||+.....++.++||||+|+++|++++|+.||....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 226 (280)
T cd05581 157 SPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN 226 (280)
T ss_pred ccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc
Confidence 21100 0122334468899999999988889999999999999999999999998653
No 374
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.95 E-value=9.9e-28 Score=263.59 Aligned_cols=198 Identities=28% Similarity=0.366 Sum_probs=168.4
Q ss_pred ccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecC--CceEEEEE
Q 001873 768 LTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNK--NLKLLFYD 840 (1001)
Q Consensus 768 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~--~~~~lv~e 840 (1001)
|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+|++++++++|||++++++++.+. +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567889999999999999976 58999999986542 235688999999999999999999999887 88999999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCC
Q 001873 841 YLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGD 920 (1001)
Q Consensus 841 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~ 920 (1001)
|++ ++|.+++.... ..+++..+..++.|++.|++|||+. +++|+||||+||++++++.+||+|||.+........
T Consensus 81 ~~~-~~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~ 155 (287)
T cd07840 81 YMD-HDLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS 155 (287)
T ss_pred ccc-ccHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCCCc
Confidence 997 58999887542 4689999999999999999999998 999999999999999999999999999987643321
Q ss_pred CCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 921 DNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 921 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
.......++..|+|||.+.+ ..++.++||||||+++|||++|+.||....
T Consensus 156 ------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~ 206 (287)
T cd07840 156 ------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGST 206 (287)
T ss_pred ------ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 11223356789999997754 567899999999999999999999997644
No 375
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.95 E-value=7e-28 Score=261.29 Aligned_cols=198 Identities=28% Similarity=0.414 Sum_probs=167.8
Q ss_pred EeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCCCCH
Q 001873 774 IGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSL 847 (1001)
Q Consensus 774 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 847 (1001)
||+|+||.||+++.. +++.||+|.+.... ..+.+.+|++++++++||||+++++.+......++||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 589999999999976 49999999885442 235788899999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCC-CCCC
Q 001873 848 SSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN-CSKT 926 (1001)
Q Consensus 848 ~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~-~~~~ 926 (1001)
.+++++.+ .+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||++.......... ....
T Consensus 81 ~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 155 (265)
T cd05579 81 ASLLENVG--SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDE 155 (265)
T ss_pred HHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccc
Confidence 99998753 589999999999999999999998 99999999999999999999999999987643221100 0001
Q ss_pred CCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 927 NQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 927 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
.......++..|+|||......++.++||||||+++||+++|+.||....
T Consensus 156 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~ 205 (265)
T cd05579 156 KEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGET 205 (265)
T ss_pred ccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence 12234468889999999988889999999999999999999999997543
No 376
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.95 E-value=1.7e-27 Score=263.97 Aligned_cols=201 Identities=28% Similarity=0.363 Sum_probs=167.4
Q ss_pred HHhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecCC-----
Q 001873 764 VVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKN----- 833 (1001)
Q Consensus 764 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~----- 833 (1001)
..++|++.+.||+|+||.||+|..+ +++.||+|++.... ....+.+|++++++++||||+++++++.+..
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 4578999999999999999999976 58999999885432 2246778999999999999999999886544
Q ss_pred -----ceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEec
Q 001873 834 -----LKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLAD 908 (1001)
Q Consensus 834 -----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~D 908 (1001)
..++|+||+++ ++.+.+... ...+++..+..++.|++.|+.|||+. +|+||||||+||++++++.+||+|
T Consensus 85 ~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~kl~d 159 (302)
T cd07864 85 KKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIKLAD 159 (302)
T ss_pred cccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEEeCc
Confidence 78999999985 777777654 34589999999999999999999998 999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 909 FGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 909 fgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
||.+........ .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||...
T Consensus 160 fg~~~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~ 221 (302)
T cd07864 160 FGLARLYNSEES------RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQAN 221 (302)
T ss_pred ccccccccCCcc------cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 999987643221 11112246778999998754 45788999999999999999999999753
No 377
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.95 E-value=7.4e-28 Score=271.34 Aligned_cols=196 Identities=23% Similarity=0.320 Sum_probs=164.8
Q ss_pred HHHHhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecC----
Q 001873 762 DDVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNK---- 832 (1001)
Q Consensus 762 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~---- 832 (1001)
.++.++|...+.||+|+||.||+|+.. +++.||||++.... ....+.+|+.++++++||||+++++++...
T Consensus 11 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 90 (342)
T cd07879 11 WELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGD 90 (342)
T ss_pred hccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCC
Confidence 344578999999999999999999864 68999999986432 224678999999999999999999987644
Q ss_pred --CceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEeccc
Q 001873 833 --NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFG 910 (1001)
Q Consensus 833 --~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfg 910 (1001)
..+++|+||+. .++.++.. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|++|||
T Consensus 91 ~~~~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg 162 (342)
T cd07879 91 EFQDFYLVMPYMQ-TDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFG 162 (342)
T ss_pred CCceEEEEecccc-cCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCC
Confidence 24689999996 57777653 3478899999999999999999998 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 911 LARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 911 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
+++..... .....+++.|+|||.+.+ ..++.++|||||||++|||++|+.||.+.
T Consensus 163 ~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~ 218 (342)
T cd07879 163 LARHADAE----------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 218 (342)
T ss_pred CCcCCCCC----------CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 98754211 123367889999998865 56889999999999999999999999864
No 378
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.95 E-value=9.9e-28 Score=258.80 Aligned_cols=198 Identities=26% Similarity=0.371 Sum_probs=172.1
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
+|++.++||+|+||.||+++.. +++.+|+|++.... ....+.+|++++++++|+||+++.+++.+....++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4788899999999999999865 68899999885432 235678899999999999999999999888999999999
Q ss_pred cCCCCHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 842 LPNGSLSSLLHGAG--KGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~--~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
+++++|.+++.+.. ...+++..++.++.|++.|++|||+. +++||||+|+||++++++.+|++|||++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 99999999987622 24578899999999999999999998 9999999999999999999999999999876432
Q ss_pred CCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
......+++.|+|||...+..++.++|+||+|+++|||++|+.||....
T Consensus 157 --------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~ 205 (256)
T cd08530 157 --------MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARS 205 (256)
T ss_pred --------CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 1122357889999999998899999999999999999999999997654
No 379
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.95 E-value=9.4e-28 Score=270.01 Aligned_cols=199 Identities=24% Similarity=0.345 Sum_probs=167.4
Q ss_pred HHhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC----CchhhHHHHHHHhhccCCCceeeEEeeeecC-----C
Q 001873 764 VVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS----DESGAFSSEIQTLGSIRHKNIVRLLGWGSNK-----N 833 (1001)
Q Consensus 764 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~-----~ 833 (1001)
+.++|++.+.||+|+||+||+|+.. +++.||||++... .....+.+|+.++++++||||+++++++... .
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 3467999999999999999999864 6899999987542 2235677899999999999999999977543 3
Q ss_pred ceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccc
Q 001873 834 LKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLAR 913 (1001)
Q Consensus 834 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~ 913 (1001)
..++||||+. ++|.+++... ..+++..+..++.|++.|+.|||+. +++||||||+||+++.++.+||+|||+++
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~ 156 (337)
T cd07858 83 DVYIVYELMD-TDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLAR 156 (337)
T ss_pred cEEEEEeCCC-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCcccc
Confidence 4799999996 7899998764 4589999999999999999999998 99999999999999999999999999998
Q ss_pred cccCCCCCCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 914 IVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
...... .......++..|+|||.+.. ..++.++|||||||++|+|++|+.||...
T Consensus 157 ~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 212 (337)
T cd07858 157 TTSEKG-------DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGK 212 (337)
T ss_pred ccCCCc-------ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCC
Confidence 653221 11223467889999998764 56889999999999999999999999653
No 380
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.95 E-value=1.7e-27 Score=263.05 Aligned_cols=197 Identities=26% Similarity=0.446 Sum_probs=164.1
Q ss_pred hcccCCCeEeecCCeeEEEEEeCC-CCEEEEEEecCCC---chhhHHHHHHHhhccC-CCceeeEEeeeecCCceEEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIPN-GETLAVKKMWSSD---ESGAFSSEIQTLGSIR-HKNIVRLLGWGSNKNLKLLFYD 840 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~Ei~~l~~l~-h~nIv~l~~~~~~~~~~~lv~e 840 (1001)
++|++.+.||+|+||+||+|++.+ ++.||||++.... ....+.+|+.++.+.. ||||+++++++.+....++|||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 94 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME 94 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence 568889999999999999999864 8999999986433 2245667777776664 9999999999999999999999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCC
Q 001873 841 YLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGD 920 (1001)
Q Consensus 841 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~ 920 (1001)
|+. +++.+++... ...+++..+..++.|+++|++|||+.+ +|+||||+|+||++++++.+||+|||.+..+....
T Consensus 95 ~~~-~~l~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~- 169 (296)
T cd06618 95 LMS-TCLDKLLKRI-QGPIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK- 169 (296)
T ss_pred ccC-cCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccccchhccCCC-
Confidence 985 5787777653 236889999999999999999999732 89999999999999999999999999987653221
Q ss_pred CCCCCCCCCCcccccccccCccccccCC----CCCccchHHHHHHHHHHHhCCCCCCC
Q 001873 921 DNCSKTNQRPQLAGSYGYMAPEHASMQR----ITEKSDVYSFGVVLLEVLTGRHPLDP 974 (1001)
Q Consensus 921 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~SlG~il~elltg~~Pf~~ 974 (1001)
......++..|+|||.+.+.. ++.++||||||+++|||++|+.||..
T Consensus 170 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 220 (296)
T cd06618 170 -------AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKN 220 (296)
T ss_pred -------cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCc
Confidence 112235778999999987543 78899999999999999999999975
No 381
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.95 E-value=9.4e-28 Score=269.53 Aligned_cols=200 Identities=25% Similarity=0.338 Sum_probs=171.1
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecCC-----ceE
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKN-----LKL 836 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~-----~~~ 836 (1001)
+|++.+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|+.+++.++||||+++.+++...+ ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4788899999999999999975 48999999886532 3467899999999999999999999887765 789
Q ss_pred EEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEeccccccccc
Q 001873 837 LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVS 916 (1001)
Q Consensus 837 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~ 916 (1001)
+||||++ ++|.+++.+.. .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||.+....
T Consensus 81 lv~e~~~-~~l~~~l~~~~--~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~ 154 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ--PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARGVD 154 (330)
T ss_pred EEecchh-hhHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEeec
Confidence 9999997 58999987643 689999999999999999999998 99999999999999999999999999998764
Q ss_pred CCCCCCCCCCCCCCcccccccccCccccccC-CCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 917 GSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ-RITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 917 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
..... ........+++.|+|||++.+. .++.++|+||+|+++|+|++|+.||....
T Consensus 155 ~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~ 211 (330)
T cd07834 155 PDEDE----KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRD 211 (330)
T ss_pred ccccc----cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCC
Confidence 43211 1112334678999999999877 88999999999999999999999997553
No 382
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.95 E-value=1.1e-27 Score=263.30 Aligned_cols=197 Identities=27% Similarity=0.329 Sum_probs=166.8
Q ss_pred cccCCCeEeecCCeeEEEEEe----CCCCEEEEEEecCCC------chhhHHHHHHHhhcc-CCCceeeEEeeeecCCce
Q 001873 767 NLTSANVIGTGSSGVVYRVTI----PNGETLAVKKMWSSD------ESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLK 835 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~----~~~~~vavK~~~~~~------~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~~~~ 835 (1001)
+|++.+.||+|+||.||+++. .+++.||||.+.... ..+.+.+|+++++++ +||||+++.+.+..+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 377888999999999999874 257889999885421 235688899999999 599999999999989999
Q ss_pred EEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccc
Q 001873 836 LLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIV 915 (1001)
Q Consensus 836 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~ 915 (1001)
++||||+++|+|.+++... ..+++..+..++.|+++|++|||+. +++||||||+||+++.++.++++|||+++..
T Consensus 81 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 155 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (288)
T ss_pred EEEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECcccccc
Confidence 9999999999999998753 3478889999999999999999998 9999999999999999999999999998765
Q ss_pred cCCCCCCCCCCCCCCcccccccccCccccccCC--CCCccchHHHHHHHHHHHhCCCCCCC
Q 001873 916 SGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQR--ITEKSDVYSFGVVLLEVLTGRHPLDP 974 (1001)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~SlG~il~elltg~~Pf~~ 974 (1001)
..... .......|+..|+|||...+.. ++.++||||+|+++|||++|+.||..
T Consensus 156 ~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 210 (288)
T cd05583 156 LAEEE------ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTV 210 (288)
T ss_pred ccccc------cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCccc
Confidence 43211 1112345889999999987654 78899999999999999999999964
No 383
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.95 E-value=1.9e-27 Score=288.56 Aligned_cols=145 Identities=31% Similarity=0.362 Sum_probs=130.6
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc-----hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEE
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE-----SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLF 838 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv 838 (1001)
.++|++.++||+|+||+||+|... +++.||||++..... ...+.+|+.+++.++||||+++++++......|+|
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 367899999999999999999976 689999999864321 25788899999999999999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEeccccccc
Q 001873 839 YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARI 914 (1001)
Q Consensus 839 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~ 914 (1001)
|||+++++|.+++... ..+++..++.++.||+.||+|||+. +|+||||||+|||++.++++||+|||+++.
T Consensus 83 mEy~~g~~L~~li~~~--~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 83 MEYLIGGDVKSLLHIY--GYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred EeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 9999999999999764 3478888999999999999999998 999999999999999999999999999863
No 384
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.95 E-value=4.5e-27 Score=261.55 Aligned_cols=194 Identities=32% Similarity=0.387 Sum_probs=164.9
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
+.|...+.||+|+||+||+|+.. +++.||+|++.... ..+.+.+|++++++++|||++++++++.+....++||
T Consensus 21 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 100 (313)
T cd06633 21 EIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVM 100 (313)
T ss_pred HHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEE
Confidence 34677788999999999999864 68899999885322 1246788999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
||+. |++.+++... ...+++.++..++.|++.|+.|||+. +++||||||+||+++.++.+||+|||.+....
T Consensus 101 e~~~-~~l~~~l~~~-~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~--- 172 (313)
T cd06633 101 EYCL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSS--- 172 (313)
T ss_pred ecCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccC---
Confidence 9996 6888887653 34578999999999999999999998 99999999999999999999999999886421
Q ss_pred CCCCCCCCCCCcccccccccCccccc---cCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHAS---MQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
......|+..|+|||++. ...++.++|||||||++|||++|+.||...
T Consensus 173 --------~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~ 223 (313)
T cd06633 173 --------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM 223 (313)
T ss_pred --------CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 112346889999999874 456888999999999999999999998754
No 385
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.95 E-value=2.9e-27 Score=264.64 Aligned_cols=195 Identities=23% Similarity=0.340 Sum_probs=165.9
Q ss_pred HHhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC----CchhhHHHHHHHhhccCCCceeeEEeeeec-CCceEE
Q 001873 764 VVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS----DESGAFSSEIQTLGSIRHKNIVRLLGWGSN-KNLKLL 837 (1001)
Q Consensus 764 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~-~~~~~l 837 (1001)
+.++|++.+.||+|+||.||+|+.. +++.||||++... ...+.+.+|++++++++||||+++.+++.. ....++
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~l 87 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYF 87 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEE
Confidence 4578999999999999999999865 7899999987432 234678899999999999999999998765 557889
Q ss_pred EEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccC
Q 001873 838 FYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSG 917 (1001)
Q Consensus 838 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~ 917 (1001)
|+||+ +++|.++++. ..+++..+..++.|+++|++|||+. +|+||||||+||++++++.+||+|||.++....
T Consensus 88 v~e~~-~~~L~~~~~~---~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~ 160 (328)
T cd07856 88 VTELL-GTDLHRLLTS---RPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLARIQDP 160 (328)
T ss_pred Eeehh-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCccccccccCC
Confidence 99999 5789988874 3467888888999999999999998 999999999999999999999999999875421
Q ss_pred CCCCCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 918 SGDDNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 918 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
. .....+++.|+|||.+.+ ..++.++||||+|+++|||++|+.||...
T Consensus 161 ~----------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~ 209 (328)
T cd07856 161 Q----------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGK 209 (328)
T ss_pred C----------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 1 122357889999998765 67899999999999999999999999754
No 386
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.95 E-value=2.1e-27 Score=260.45 Aligned_cols=196 Identities=23% Similarity=0.334 Sum_probs=167.5
Q ss_pred ccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc---hhhHHHHHHHhhccC-CCceeeEEeeeecCCceEEEEEcc
Q 001873 768 LTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE---SGAFSSEIQTLGSIR-HKNIVRLLGWGSNKNLKLLFYDYL 842 (1001)
Q Consensus 768 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~-h~nIv~l~~~~~~~~~~~lv~e~~ 842 (1001)
|++.+.||+|+||+||+|+.. +++.||||++..... .....+|+..+++++ ||||+++++++.+++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 567889999999999999976 578999998854432 234567999999998 999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCC
Q 001873 843 PNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922 (1001)
Q Consensus 843 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~ 922 (1001)
+|+|.+++.......+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++|+|||.++......
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~--- 153 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP--- 153 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCC---
Confidence 78999998875545689999999999999999999998 99999999999999999999999999998653221
Q ss_pred CCCCCCCCcccccccccCccccc-cCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 923 CSKTNQRPQLAGSYGYMAPEHAS-MQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 923 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
......++..|+|||++. ...++.++|+||||+++|||++|+.||...
T Consensus 154 -----~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~ 202 (283)
T cd07830 154 -----PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGS 202 (283)
T ss_pred -----CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCC
Confidence 112346788999999874 456789999999999999999999999654
No 387
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.95 E-value=1.5e-27 Score=271.04 Aligned_cols=203 Identities=26% Similarity=0.387 Sum_probs=175.8
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-chhhHHHHHHHhhcc-CCCceeeEEeeee-----cCCceE
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-ESGAFSSEIQTLGSI-RHKNIVRLLGWGS-----NKNLKL 836 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~-----~~~~~~ 836 (1001)
.+.|++.++||.|.+|.||+++.. +++.+|||+..... ..++.+.|..+++.. +|||++.++|++. .++.+|
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLW 97 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLW 97 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEE
Confidence 356888899999999999999854 68889999875443 346788899998877 6999999999875 356889
Q ss_pred EEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEeccccccccc
Q 001873 837 LFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVS 916 (1001)
Q Consensus 837 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~ 916 (1001)
+|||||-+||..|+++......+.|..+..|.+.++.|+.+||.. .++|||||-.||+++.++.||++|||.+.+++
T Consensus 98 LVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKLvDFGvSaQld 174 (953)
T KOG0587|consen 98 LVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 174 (953)
T ss_pred EEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEEeeeeeeeeee
Confidence 999999999999999987777789999999999999999999998 99999999999999999999999999998775
Q ss_pred CCCCCCCCCCCCCCcccccccccCcccccc-----CCCCCccchHHHHHHHHHHHhCCCCCCCCCC
Q 001873 917 GSGDDNCSKTNQRPQLAGSYGYMAPEHASM-----QRITEKSDVYSFGVVLLEVLTGRHPLDPTLP 977 (1001)
Q Consensus 917 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~ 977 (1001)
. ....+.+.+|||.|||||++.. ..|+.++|+||+|++..||--|.+|+..+.|
T Consensus 175 s-------T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHP 233 (953)
T KOG0587|consen 175 S-------TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHP 233 (953)
T ss_pred c-------ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcch
Confidence 3 3345566789999999998843 4677899999999999999999999877643
No 388
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.95 E-value=3e-27 Score=265.42 Aligned_cols=200 Identities=24% Similarity=0.310 Sum_probs=164.2
Q ss_pred cccCCCeEeecCCeeEEEEEeC-C--CCEEEEEEecCCC----chhhHHHHHHHhhcc-CCCceeeEEeeeec----CCc
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-N--GETLAVKKMWSSD----ESGAFSSEIQTLGSI-RHKNIVRLLGWGSN----KNL 834 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~--~~~vavK~~~~~~----~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~----~~~ 834 (1001)
+|++.+.||+|+||.||+++.. . +..||+|++.... ..+.+.+|+.+++++ +||||+++++.+.. ...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4778889999999999999965 3 7899999885422 235678899999999 59999999986432 245
Q ss_pred eEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEeccccccc
Q 001873 835 KLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARI 914 (1001)
Q Consensus 835 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~ 914 (1001)
.++++||+. ++|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++.
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a~~ 154 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSG--QPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLARG 154 (332)
T ss_pred EEEEEeccc-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCcee
Confidence 688899986 6899998753 4588999999999999999999998 999999999999999999999999999987
Q ss_pred ccCCCCCCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 915 VSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
....... .........||+.|+|||++.+ ..++.++||||+||++|+|++|+.||...
T Consensus 155 ~~~~~~~---~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~ 213 (332)
T cd07857 155 FSENPGE---NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGK 213 (332)
T ss_pred ccccccc---ccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCC
Confidence 6433221 1112234578999999998765 56889999999999999999999999754
No 389
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.95 E-value=3.2e-27 Score=259.05 Aligned_cols=196 Identities=28% Similarity=0.362 Sum_probs=168.3
Q ss_pred ccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc----hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEcc
Q 001873 768 LTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE----SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYL 842 (1001)
Q Consensus 768 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 842 (1001)
|++.+.||+|++|.||++... +++.+|+|++..... ...+.+|++++++++|+||+++++++.++...++||||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 567789999999999999865 689999998854332 357888999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCC
Q 001873 843 PNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922 (1001)
Q Consensus 843 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~ 922 (1001)
+ +++.+++.... ..+++..+..++.|++.|+.|||+. +|+|+||||+||+++.++.+||+|||.+.......
T Consensus 81 ~-~~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~--- 152 (283)
T cd05118 81 D-TDLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPV--- 152 (283)
T ss_pred C-CCHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc---
Confidence 7 48888887642 4689999999999999999999998 99999999999999999999999999998764332
Q ss_pred CCCCCCCCcccccccccCccccccC-CCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 923 CSKTNQRPQLAGSYGYMAPEHASMQ-RITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 923 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
.......++..|+|||.+.+. .++.++||||+|+++|+|+||+.||...
T Consensus 153 ----~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~ 202 (283)
T cd05118 153 ----RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGK 202 (283)
T ss_pred ----ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 111223578899999998766 7899999999999999999999999654
No 390
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.95 E-value=1.7e-27 Score=284.29 Aligned_cols=217 Identities=28% Similarity=0.379 Sum_probs=173.9
Q ss_pred ccCCCeEeecCCeeEEEEEeC----C----CCEEEEEEecCCC---chhhHHHHHHHhhcc-CCCceeeEEeeeecCCce
Q 001873 768 LTSANVIGTGSSGVVYRVTIP----N----GETLAVKKMWSSD---ESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLK 835 (1001)
Q Consensus 768 ~~~~~~lG~G~fg~Vy~~~~~----~----~~~vavK~~~~~~---~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~~~~ 835 (1001)
..+.+.+|+|+||.|++|... . ...||||..+... +.+.+..|+++|+.+ +||||+.++|+|..++..
T Consensus 298 l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~ 377 (609)
T KOG0200|consen 298 LKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPL 377 (609)
T ss_pred ccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCce
Confidence 345568999999999998732 1 4579999986544 347899999999999 699999999999999999
Q ss_pred EEEEEccCCCCHHHHhhcCC------------C--CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCC
Q 001873 836 LLFYDYLPNGSLSSLLHGAG------------K--GGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPG 901 (1001)
Q Consensus 836 ~lv~e~~~~gsL~~~l~~~~------------~--~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~ 901 (1001)
++|+||++.|+|.++++..+ . ..++..+.+.++.|||.||+||++. ++||||+..+||++.++
T Consensus 378 ~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNVLi~~~ 454 (609)
T KOG0200|consen 378 YVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNVLITKN 454 (609)
T ss_pred EEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhEEecCC
Confidence 99999999999999998764 0 1277889999999999999999998 99999999999999999
Q ss_pred CcEEEecccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCc
Q 001873 902 YQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTLPGGA 980 (1001)
Q Consensus 902 ~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~~~~~ 980 (1001)
..+||+|||+|+.......+.......+ -...|||||.+....|+.++|||||||++||++| |..||.+ .+...
T Consensus 455 ~~~kIaDFGlar~~~~~~~y~~~~~~~~----LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~-~~~~~ 529 (609)
T KOG0200|consen 455 KVIKIADFGLARDHYNKDYYRTKSSAGT----LPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPG-IPPTE 529 (609)
T ss_pred CEEEEccccceeccCCCCceEecCCCCc----cceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCC-CCcHH
Confidence 9999999999997654433221111100 1245999999999999999999999999999999 8888865 22233
Q ss_pred Ccccchhhhhcc
Q 001873 981 PLVQWTPLMFLM 992 (1001)
Q Consensus 981 ~l~~~~~~~~~~ 992 (1001)
++.++.+....+
T Consensus 530 ~l~~~l~~G~r~ 541 (609)
T KOG0200|consen 530 ELLEFLKEGNRM 541 (609)
T ss_pred HHHHHHhcCCCC
Confidence 334444444433
No 391
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.95 E-value=2e-27 Score=267.76 Aligned_cols=200 Identities=24% Similarity=0.342 Sum_probs=163.9
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC--chhhHHHHHHHhhccCCCceeeEEeeeecC---------
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD--ESGAFSSEIQTLGSIRHKNIVRLLGWGSNK--------- 832 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~--------- 832 (1001)
..+|++.+.||+|+||.||+|... +++.||+|++.... ..+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 367999999999999999999864 68999999885433 335688999999999999999999865543
Q ss_pred -----CceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEEC-CCCcEEE
Q 001873 833 -----NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLG-PGYQAYL 906 (1001)
Q Consensus 833 -----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~-~~~~~ki 906 (1001)
...++||||++ ++|.+++.. ..+++..+..++.||+.|++|||+. +|+||||||+||+++ +++.+|+
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~kl 156 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLKI 156 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEEE
Confidence 35789999997 689988864 3478999999999999999999998 999999999999997 4567899
Q ss_pred ecccccccccCCCCCCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 907 ADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 907 ~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
+|||.++....... .........|+..|+|||.+.. ..++.++||||+||++|||++|+.||...
T Consensus 157 ~dfg~~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~ 222 (342)
T cd07854 157 GDFGLARIVDPHYS----HKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGA 222 (342)
T ss_pred CCcccceecCCccc----cccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 99999976532211 1111122357889999997643 56788999999999999999999999754
No 392
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.95 E-value=6e-27 Score=260.00 Aligned_cols=194 Identities=32% Similarity=0.397 Sum_probs=164.5
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
+.|+..+.||+|+||.||+|+.. +++.||+|.+.... ..+++.+|+++++.++|+|++++.+++......++||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 34777788999999999999965 57899999875321 1246788999999999999999999999999999999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
||+. |++.+++... ...+++.++..++.|++.|+.|||+. +++||||||+||+++.++.+|++|||++......
T Consensus 95 e~~~-~~l~~~~~~~-~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~- 168 (308)
T cd06634 95 EYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA- 168 (308)
T ss_pred EccC-CCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecCc-
Confidence 9996 6888877543 33478899999999999999999998 9999999999999999999999999998764321
Q ss_pred CCCCCCCCCCCcccccccccCccccc---cCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHAS---MQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
....|++.|+|||.+. ...++.++|||||||++|||++|+.||...
T Consensus 169 ----------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 217 (308)
T cd06634 169 ----------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM 217 (308)
T ss_pred ----------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccc
Confidence 1235788999999874 356788999999999999999999998653
No 393
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.95 E-value=5.3e-27 Score=249.95 Aligned_cols=181 Identities=25% Similarity=0.220 Sum_probs=154.6
Q ss_pred cCCeeEEEEEeC-CCCEEEEEEecCCCchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCCCCHHHHhhcCC
Q 001873 777 GSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAG 855 (1001)
Q Consensus 777 G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 855 (1001)
|.||+||+++.. +++.||+|++.... .+.+|...+....||||+++++++.+.+..++||||+++|+|.+++.+.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~- 79 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS---EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKF- 79 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh---hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHh-
Confidence 899999999865 68999999986543 3344555555667999999999999999999999999999999998764
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCCCCCCCCccccc
Q 001873 856 KGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGS 935 (1001)
Q Consensus 856 ~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt 935 (1001)
..+++..+..++.|++.|++|+|+. +|+||||||+||+++.++.++++|||.+....... ....++
T Consensus 80 -~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~----------~~~~~~ 145 (237)
T cd05576 80 -LNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC----------DGEAVE 145 (237)
T ss_pred -cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhcccccc----------ccCCcC
Confidence 3488999999999999999999998 99999999999999999999999999886653211 122456
Q ss_pred ccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 936 YGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 936 ~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
..|+|||......++.++||||+|+++|||++|+.||+..
T Consensus 146 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~ 185 (237)
T cd05576 146 NMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECH 185 (237)
T ss_pred ccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcC
Confidence 7899999998888999999999999999999999887643
No 394
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.95 E-value=5.2e-27 Score=257.19 Aligned_cols=196 Identities=28% Similarity=0.371 Sum_probs=168.3
Q ss_pred ccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEcc
Q 001873 768 LTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYL 842 (1001)
Q Consensus 768 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 842 (1001)
|+..+.||+|+||.||+|+.. +++.||+|++.... ..+.+.+|+.++++++|+||+++++++.+.+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 566788999999999999976 58999999886532 2356788999999999999999999999989999999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCC
Q 001873 843 PNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDN 922 (1001)
Q Consensus 843 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~ 922 (1001)
+ ++|.+++.+.. ..+++..+.+++.|++.|++|||+. +|+||||+|+||++++++.+||+|||.++.......
T Consensus 81 ~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-- 153 (282)
T cd07829 81 D-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR-- 153 (282)
T ss_pred C-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCcc--
Confidence 7 59999998642 3589999999999999999999998 999999999999999999999999999886533211
Q ss_pred CCCCCCCCcccccccccCccccccC-CCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 923 CSKTNQRPQLAGSYGYMAPEHASMQ-RITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 923 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
......++..|+|||.+.+. .++.++||||+|+++||+++|+.||...
T Consensus 154 -----~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~ 202 (282)
T cd07829 154 -----TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGD 202 (282)
T ss_pred -----ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCc
Confidence 11223467789999998765 8889999999999999999999999764
No 395
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.94 E-value=4.5e-27 Score=254.42 Aligned_cols=197 Identities=25% Similarity=0.348 Sum_probs=163.9
Q ss_pred cccCCCeEeecCCeeEEEEEeCC-CCEEEEEEecC-------CCchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEE
Q 001873 767 NLTSANVIGTGSSGVVYRVTIPN-GETLAVKKMWS-------SDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLF 838 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~-------~~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv 838 (1001)
+|.+.+.||+|+||+||+++... +..+++|..+. ..+..++.+|+.++++++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 57888999999999999998653 44555555432 12234577899999999999999999999988899999
Q ss_pred EEccCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEeccccccccc
Q 001873 839 YDYLPNGSLSSLLHGA--GKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVS 916 (1001)
Q Consensus 839 ~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~ 916 (1001)
|||+++++|.+++.+. ....+++..+..++.|++.|+.|||+. +++|+||||+||++++ +.+|++|||.++...
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence 9999999999988652 234579999999999999999999998 9999999999999975 579999999987654
Q ss_pred CCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCC
Q 001873 917 GSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974 (1001)
Q Consensus 917 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~ 974 (1001)
.... ......|++.|+|||......++.++|+||+|+++|+|++|+.||..
T Consensus 157 ~~~~-------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~ 207 (260)
T cd08222 157 GSCD-------LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEG 207 (260)
T ss_pred CCcc-------cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 3211 12234578899999999888889999999999999999999999964
No 396
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.8e-27 Score=264.00 Aligned_cols=196 Identities=27% Similarity=0.318 Sum_probs=166.1
Q ss_pred HhcccCCCeEeecCCeeEEEEEe-CCCCEEEEEEecCCCchhhHHHHHHHhhcc-CCCceeeEEeeeecCCceEEEEEcc
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTI-PNGETLAVKKMWSSDESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYL 842 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~ 842 (1001)
.+.|.....+|.|+|+.|-.... .+++..+||++... ..+..+|+.++.+. +||||++..+.+.+..+.|+|||.+
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~--~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l 398 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR--ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELL 398 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheecccc--ccccccccchhhhhcCCCcceeecceecCCceeeeeehhc
Confidence 35677777899999999988764 46899999998655 34556788776666 6999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEE-CCCCcEEEecccccccccCCCCC
Q 001873 843 PNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLL-GPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 843 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll-~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
.|+-+.+.+..... .. ..+..|+.+|+.|++|||++ ||||||+||+|||+ ++.++++|+|||.++.....
T Consensus 399 ~g~ell~ri~~~~~--~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~--- 469 (612)
T KOG0603|consen 399 DGGELLRRIRSKPE--FC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS--- 469 (612)
T ss_pred cccHHHHHHHhcch--hH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhCchh---
Confidence 99988888775322 23 67778999999999999998 99999999999999 69999999999999876433
Q ss_pred CCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~~ 978 (1001)
..+.+-|..|.|||+.....|++++|+||+|+++|+|++|+.||.....+
T Consensus 470 -------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~ 519 (612)
T KOG0603|consen 470 -------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG 519 (612)
T ss_pred -------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch
Confidence 12235688999999999999999999999999999999999999976544
No 397
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.94 E-value=2.9e-27 Score=266.62 Aligned_cols=197 Identities=22% Similarity=0.320 Sum_probs=167.5
Q ss_pred HHHHhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecCCc--
Q 001873 762 DDVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNL-- 834 (1001)
Q Consensus 762 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~-- 834 (1001)
.++.++|++.+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|+.++++++||||+++.+++...+.
T Consensus 11 ~~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07851 11 WEVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLE 90 (343)
T ss_pred ecccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccc
Confidence 345678999999999999999999975 58899999885432 23567789999999999999999987765554
Q ss_pred ----eEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEeccc
Q 001873 835 ----KLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFG 910 (1001)
Q Consensus 835 ----~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfg 910 (1001)
.++|+||+ +++|.+++.. ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||
T Consensus 91 ~~~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 91 DFQDVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred ccccEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccc
Confidence 89999999 6799999874 3589999999999999999999998 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 911 LARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 911 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
++...... .....++..|+|||.+.+ ..++.++||||+|+++||+++|+.||...
T Consensus 164 ~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~ 219 (343)
T cd07851 164 LARHTDDE----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGS 219 (343)
T ss_pred cccccccc----------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 99865321 123357889999998755 46789999999999999999999999654
No 398
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.94 E-value=1e-26 Score=249.97 Aligned_cols=190 Identities=32% Similarity=0.396 Sum_probs=166.1
Q ss_pred EeecCCeeEEEEEeC-CCCEEEEEEecCCC-----chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCCCCH
Q 001873 774 IGTGSSGVVYRVTIP-NGETLAVKKMWSSD-----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSL 847 (1001)
Q Consensus 774 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL 847 (1001)
||+|+||.||++... ++++||+|.+.... ....+.+|+.++++++||||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999875 58999999875433 235788999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCCCCC
Q 001873 848 SSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTN 927 (1001)
Q Consensus 848 ~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~~~ 927 (1001)
.+++.... .+++.....++.|+++|+.|+|+. +++|+||+|+||+++.++.++|+|||.+....... .
T Consensus 81 ~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-------~ 148 (250)
T cd05123 81 FSHLSKEG--RFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-------S 148 (250)
T ss_pred HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCC-------C
Confidence 99998643 478999999999999999999998 99999999999999999999999999987653321 1
Q ss_pred CCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 928 QRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 928 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
......++..|+|||...+..++.++|+||||+++|++++|+.||...
T Consensus 149 ~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~ 196 (250)
T cd05123 149 RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAE 196 (250)
T ss_pred cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 123346788999999998888899999999999999999999999654
No 399
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=4.9e-28 Score=239.33 Aligned_cols=220 Identities=21% Similarity=0.328 Sum_probs=177.9
Q ss_pred cccHHHHHhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc-hhhHHHHHHHhhcc-CCCceeeEEe-eeecCC
Q 001873 758 DFSIDDVVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE-SGAFSSEIQTLGSI-RHKNIVRLLG-WGSNKN 833 (1001)
Q Consensus 758 ~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~Ei~~l~~l-~h~nIv~l~~-~~~~~~ 833 (1001)
+...-++.+.|.+.+.+|+|.||.+-+++++ ....+|+|-+..+.. .++|.+|...--.+ .|.||+.-++ .|...+
T Consensus 16 el~kv~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d 95 (378)
T KOG1345|consen 16 ELKKVDLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSD 95 (378)
T ss_pred cccccchhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCc
Confidence 3444556789999999999999999999987 577899998876654 47899999886666 5899998877 467788
Q ss_pred ceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEEC--CCCcEEEecccc
Q 001873 834 LKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLG--PGYQAYLADFGL 911 (1001)
Q Consensus 834 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~--~~~~~ki~Dfgl 911 (1001)
.+++++||++.|+|..-+.. .++-+....+++.|+++|++|||++ .+||||||.+||||- +..++|+||||.
T Consensus 96 ~YvF~qE~aP~gdL~snv~~---~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~ 169 (378)
T KOG1345|consen 96 AYVFVQEFAPRGDLRSNVEA---AGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGL 169 (378)
T ss_pred eEEEeeccCccchhhhhcCc---ccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeeccc
Confidence 88999999999999998875 4577888899999999999999999 999999999999993 445899999999
Q ss_pred cccccCCCCCCCCCCCCCCcccccccccCcccccc-----CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcCcccch
Q 001873 912 ARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM-----QRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWT 986 (1001)
Q Consensus 912 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~~~~~l~~~~ 986 (1001)
.+..+..- ...--+-.|.|||.... -...+.+|||.||+++|.++||+.||...-..+.+.+.|.
T Consensus 170 t~k~g~tV----------~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~ 239 (378)
T KOG1345|consen 170 TRKVGTTV----------KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWE 239 (378)
T ss_pred ccccCcee----------hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHH
Confidence 87543210 11123456899996533 2346789999999999999999999998777788888887
Q ss_pred hhhhccc
Q 001873 987 PLMFLML 993 (1001)
Q Consensus 987 ~~~~~~~ 993 (1001)
.+....-
T Consensus 240 ~w~~rk~ 246 (378)
T KOG1345|consen 240 QWLKRKN 246 (378)
T ss_pred HHhcccC
Confidence 7754443
No 400
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.94 E-value=1.8e-27 Score=241.66 Aligned_cols=212 Identities=22% Similarity=0.304 Sum_probs=177.6
Q ss_pred HHhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCC----chhhHHHHHHHhhccCCCceeeEEeeeecC------
Q 001873 764 VVRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSD----ESGAFSSEIQTLGSIRHKNIVRLLGWGSNK------ 832 (1001)
Q Consensus 764 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~------ 832 (1001)
+..+|.-.+.+|.|+- .|..+-+. .+++||+|+...+. ..++..+|...+..+.|+||++++.++...
T Consensus 15 v~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~ 93 (369)
T KOG0665|consen 15 VPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEF 93 (369)
T ss_pred eeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHH
Confidence 3456777788899988 55555432 58999999885542 236778999999999999999999988543
Q ss_pred CceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEeccccc
Q 001873 833 NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLA 912 (1001)
Q Consensus 833 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla 912 (1001)
...|+|||||. ++|...+. ...+-+++..|..|+++|++|+|+. +|+||||||+||++..++.+||.|||+|
T Consensus 94 ~e~y~v~e~m~-~nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~a 165 (369)
T KOG0665|consen 94 QEVYLVMELMD-ANLCQVIL----MELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLA 165 (369)
T ss_pred HhHHHHHHhhh-hHHHHHHH----HhcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhh
Confidence 35689999996 79999887 2367888999999999999999998 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcCcccchhhhhcc
Q 001873 913 RIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLM 992 (1001)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~~~~~l~~~~~~~~~~ 992 (1001)
+.... .-..+..+.|+.|.|||++.+..|.+.+||||+||++.||++|+.-|. |++.++||.++....
T Consensus 166 r~e~~--------~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~----g~d~idQ~~ki~~~l 233 (369)
T KOG0665|consen 166 RTEDT--------DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFP----GKDHIDQWNKIIEQL 233 (369)
T ss_pred cccCc--------ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEec----CchHHHHHHHHHHHh
Confidence 86321 125567789999999999988889999999999999999999997554 889999999998777
Q ss_pred cchh
Q 001873 993 LNLE 996 (1001)
Q Consensus 993 ~~~~ 996 (1001)
|.+-
T Consensus 234 gtpd 237 (369)
T KOG0665|consen 234 GTPD 237 (369)
T ss_pred cCCC
Confidence 7543
No 401
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.94 E-value=1.4e-27 Score=230.26 Aligned_cols=207 Identities=22% Similarity=0.281 Sum_probs=170.4
Q ss_pred HhcccCCCeEeecCCeeEEEEE-eCCCCEEEEEEecCCCchhhHHHHHHHhhccC-CCceeeEEeeeecC--CceEEEEE
Q 001873 765 VRNLTSANVIGTGSSGVVYRVT-IPNGETLAVKKMWSSDESGAFSSEIQTLGSIR-HKNIVRLLGWGSNK--NLKLLFYD 840 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~Ei~~l~~l~-h~nIv~l~~~~~~~--~~~~lv~e 840 (1001)
.++|++.+++|+|-|++||.|. ..++++++||.++ +...+.+.+|+.+++.++ ||||+++++...+. ....+|+|
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLK-PVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE 115 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILK-PVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFE 115 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeec-hHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhh
Confidence 4689999999999999999998 4578889999874 455678999999999997 99999999987664 45579999
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCC-CcEEEecccccccccCCC
Q 001873 841 YLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPG-YQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 841 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~ki~Dfgla~~~~~~~ 919 (1001)
|+.+.+...+-.. ++..++..++.++++|+.|+|++ ||+|||+||.|+++|.. -.++++|+|+|.++.+..
T Consensus 116 ~v~n~Dfk~ly~t-----l~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~ 187 (338)
T KOG0668|consen 116 YVNNTDFKQLYPT-----LTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 187 (338)
T ss_pred hhccccHHHHhhh-----hchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhhcCCCc
Confidence 9998887776542 56667778899999999999999 99999999999999954 579999999999886543
Q ss_pred CCCCCCCCCCCcccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcCcccchhh
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHASM-QRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPL 988 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~~~~~l~~~~~~ 988 (1001)
. -...+.+..|--||.+.. ..|+.+-|+|||||++..|+..+.||-......+++++.+++
T Consensus 188 e--------YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakV 249 (338)
T KOG0668|consen 188 E--------YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKV 249 (338)
T ss_pred e--------eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHH
Confidence 2 223467788999998754 678999999999999999999999998765555555544443
No 402
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.8e-26 Score=246.02 Aligned_cols=138 Identities=28% Similarity=0.350 Sum_probs=119.3
Q ss_pred cccHHHHH--hcccCCCeEeecCCeeEEEEEe-CCCCEEEEEEecCCCch-hhHHHHHHHhhccC-----C---CceeeE
Q 001873 758 DFSIDDVV--RNLTSANVIGTGSSGVVYRVTI-PNGETLAVKKMWSSDES-GAFSSEIQTLGSIR-----H---KNIVRL 825 (1001)
Q Consensus 758 ~~~~~~~~--~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~Ei~~l~~l~-----h---~nIv~l 825 (1001)
...+.|+. .+|-+.++||-|.|++||++.+ .+.+.||+|+.++.... +....||+++++++ | .+||++
T Consensus 68 pV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~L 147 (590)
T KOG1290|consen 68 PVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQL 147 (590)
T ss_pred eeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeee
Confidence 33444443 5899999999999999999875 46788999999876654 67889999999983 3 379999
Q ss_pred Eeeeec----CCceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEE
Q 001873 826 LGWGSN----KNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLL 898 (1001)
Q Consensus 826 ~~~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll 898 (1001)
++.|.. ..++|||+|++ |.+|..+|.+...+.++...+++|++||+.||.|||.+| +|||.||||+|||+
T Consensus 148 lD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 148 LDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred eccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 998864 55889999999 789999999988889999999999999999999999998 99999999999997
No 403
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.94 E-value=3.5e-26 Score=262.83 Aligned_cols=201 Identities=20% Similarity=0.255 Sum_probs=151.1
Q ss_pred HhcccCCCeEeecCCeeEEEEEe-----------------CCCCEEEEEEecCCCc--h--------------hhHHHHH
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTI-----------------PNGETLAVKKMWSSDE--S--------------GAFSSEI 811 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~-----------------~~~~~vavK~~~~~~~--~--------------~~~~~Ei 811 (1001)
.++|++.++||+|+||+||+|.. ..++.||||++..... . +....|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 45799999999999999999863 2356899999854321 1 2234477
Q ss_pred HHhhccCCCce-----eeEEeeeec--------CCceEEEEEccCCCCHHHHhhcCCC----------------------
Q 001873 812 QTLGSIRHKNI-----VRLLGWGSN--------KNLKLLFYDYLPNGSLSSLLHGAGK---------------------- 856 (1001)
Q Consensus 812 ~~l~~l~h~nI-----v~l~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~~---------------------- 856 (1001)
.++.+++|.++ ++++++|.. ++..++||||+++++|.++++....
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 77777766554 667777643 4567999999999999999874211
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCCCCCCCCcccccc
Q 001873 857 GGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSY 936 (1001)
Q Consensus 857 ~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~ 936 (1001)
...++..+..++.|++.|+.|+|+. +|+||||||+||+++.++.+||+|||+++.+..... .......+|+
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~------~~~~~g~~tp 374 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN------FNPLYGMLDP 374 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCc------cCccccCCCc
Confidence 1235677889999999999999998 999999999999999999999999999976532211 0111223578
Q ss_pred cccCccccccCC--------------------CC--CccchHHHHHHHHHHHhCCC-CCCC
Q 001873 937 GYMAPEHASMQR--------------------IT--EKSDVYSFGVVLLEVLTGRH-PLDP 974 (1001)
Q Consensus 937 ~y~aPE~~~~~~--------------------~~--~~~Dv~SlG~il~elltg~~-Pf~~ 974 (1001)
.|+|||.+.... |+ .+.||||+||++|||++|.. ||..
T Consensus 375 ~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~ 435 (507)
T PLN03224 375 RYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVAN 435 (507)
T ss_pred ceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccc
Confidence 999999875321 12 24799999999999999875 7754
No 404
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.94 E-value=2.8e-26 Score=271.15 Aligned_cols=199 Identities=19% Similarity=0.254 Sum_probs=143.0
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC-C----CCEEEEEEecCCCchhhHHHHHHHhhccCCCceeeEEee------eecCC
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP-N----GETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGW------GSNKN 833 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~-~----~~~vavK~~~~~~~~~~~~~Ei~~l~~l~h~nIv~l~~~------~~~~~ 833 (1001)
.++|++.+.||+|+||+||+|++. + +..||||++......+....| .+++..+.+++.+... .....
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEIWMNE--RVRRACPNSCADFVYGFLEPVSSKKED 208 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHHHHHH--HHHhhchhhHHHHHHhhhcccccccCC
Confidence 467999999999999999999975 4 689999997544332222222 1122222222222221 24566
Q ss_pred ceEEEEEccCCCCHHHHhhcCCCC------------------CCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCC
Q 001873 834 LKLLFYDYLPNGSLSSLLHGAGKG------------------GADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMN 895 (1001)
Q Consensus 834 ~~~lv~e~~~~gsL~~~l~~~~~~------------------~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~N 895 (1001)
..++||||+++++|.++++..... ......+..++.|++.|++|||++ +|+||||||+|
T Consensus 209 ~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLKP~N 285 (566)
T PLN03225 209 EYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVKPQN 285 (566)
T ss_pred ceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCCHHH
Confidence 789999999999999998753211 011234567899999999999998 99999999999
Q ss_pred eEECC-CCcEEEecccccccccCCCCCCCCCCCCCCcccccccccCccccccC----------------------CCCCc
Q 001873 896 VLLGP-GYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQ----------------------RITEK 952 (1001)
Q Consensus 896 Ill~~-~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~ 952 (1001)
||+++ ++.+||+|||+|+.+..... .......+|++|||||.+... .++.+
T Consensus 286 ILl~~~~~~~KL~DFGlA~~l~~~~~------~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k 359 (566)
T PLN03225 286 IIFSEGSGSFKIIDLGAAADLRVGIN------YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDR 359 (566)
T ss_pred EEEeCCCCcEEEEeCCCccccccccc------cCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCC
Confidence 99985 67999999999986543211 122345789999999965321 23456
Q ss_pred cchHHHHHHHHHHHhCCCCCCC
Q 001873 953 SDVYSFGVVLLEVLTGRHPLDP 974 (1001)
Q Consensus 953 ~Dv~SlG~il~elltg~~Pf~~ 974 (1001)
+||||+||++|||+++..|++.
T Consensus 360 ~DVwSlGviL~el~~~~~~~~~ 381 (566)
T PLN03225 360 FDIYSAGLIFLQMAFPNLRSDS 381 (566)
T ss_pred cccHHHHHHHHHHHhCcCCCch
Confidence 7999999999999998777654
No 405
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.93 E-value=1.1e-25 Score=237.53 Aligned_cols=197 Identities=32% Similarity=0.435 Sum_probs=171.0
Q ss_pred ccCCCeEeecCCeeEEEEEeCC-CCEEEEEEecCCC---chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccC
Q 001873 768 LTSANVIGTGSSGVVYRVTIPN-GETLAVKKMWSSD---ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLP 843 (1001)
Q Consensus 768 ~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~ 843 (1001)
|+..+.||+|++|+||++...+ ++++|+|.+.... ..+.+.+|++.+++++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 5667889999999999999764 8999999986543 35688899999999999999999999998899999999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCC
Q 001873 844 NGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNC 923 (1001)
Q Consensus 844 ~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~ 923 (1001)
+++|.+++..... ..++.....++.+++.++.|+|+. +++|+|++|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~---- 152 (225)
T smart00221 81 GGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDL---- 152 (225)
T ss_pred CCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc----
Confidence 9999999986432 178899999999999999999998 99999999999999999999999999998764332
Q ss_pred CCCCCCCcccccccccCcccc-ccCCCCCccchHHHHHHHHHHHhCCCCCCC
Q 001873 924 SKTNQRPQLAGSYGYMAPEHA-SMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974 (1001)
Q Consensus 924 ~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~SlG~il~elltg~~Pf~~ 974 (1001)
........++..|++||.. ....++.++|+|++|+++|||++|+.||..
T Consensus 153 --~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 153 --AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred --cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 0122334678899999998 677788899999999999999999999966
No 406
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.93 E-value=1.3e-26 Score=262.12 Aligned_cols=200 Identities=29% Similarity=0.447 Sum_probs=163.1
Q ss_pred CCeEeecCCee-EEEEEeCCCCEEEEEEecCCCchhhHHHHHHHhhcc-CCCceeeEEeeeecCCceEEEEEccCCCCHH
Q 001873 771 ANVIGTGSSGV-VYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLLFYDYLPNGSLS 848 (1001)
Q Consensus 771 ~~~lG~G~fg~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 848 (1001)
.+++|.|+.|+ ||+|.. +|+.||||++..+. .....+|+..++.- +|||||++++...+++..||..|.|. .+|.
T Consensus 514 ~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~-~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~-~sL~ 590 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRGVY-EGREVAVKRLLEEF-FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA-CSLQ 590 (903)
T ss_pred HHHcccCCCCcEEEEEee-CCceehHHHHhhHh-HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh-hhHH
Confidence 45689999985 688988 58999999984432 34567899999988 59999999999999999999999996 7999
Q ss_pred HHhhcCC-CCC-CCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECC---C--CcEEEecccccccccCCCCC
Q 001873 849 SLLHGAG-KGG-ADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGP---G--YQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 849 ~~l~~~~-~~~-~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~---~--~~~ki~Dfgla~~~~~~~~~ 921 (1001)
+++...+ ... ..-...+.+..|+++|+++||+- +||||||||+||||+. + .+++|+|||+++.+..+...
T Consensus 591 dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS 667 (903)
T KOG1027|consen 591 DLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSS 667 (903)
T ss_pred HHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccccccCCCcch
Confidence 9998741 111 11134467788999999999996 9999999999999975 3 47899999999998755332
Q ss_pred CCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhC-CCCCCCCCCCCc
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTG-RHPLDPTLPGGA 980 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg-~~Pf~~~~~~~~ 980 (1001)
. .......||-+|+|||++....-..++||||+||++|+.++| .+||+.....+.
T Consensus 668 ~----~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~ 723 (903)
T KOG1027|consen 668 F----SRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA 723 (903)
T ss_pred h----hcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh
Confidence 2 225567899999999999988888899999999999999985 999987655433
No 407
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.92 E-value=1.2e-25 Score=232.72 Aligned_cols=205 Identities=23% Similarity=0.292 Sum_probs=166.3
Q ss_pred hcccCCCeEeecCCeeEEEEEeCC------CCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeec-CCce
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIPN------GETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSN-KNLK 835 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~-~~~~ 835 (1001)
.+++....+.+|.||+||.|.|++ .+.|.||.++.... ...+.+|...+..+.|||+.++.+++.+ ....
T Consensus 284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P 363 (563)
T KOG1024|consen 284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATP 363 (563)
T ss_pred hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcc
Confidence 456666779999999999997643 34567787755433 2568889999999999999999998754 4466
Q ss_pred EEEEEccCCCCHHHHhhcCC------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecc
Q 001873 836 LLFYDYLPNGSLSSLLHGAG------KGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADF 909 (1001)
Q Consensus 836 ~lv~e~~~~gsL~~~l~~~~------~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Df 909 (1001)
+++|.++--|+|..++...+ .+.++..+...++.|++.|++|||+. +|||.||..+|.+||+.-++||+|=
T Consensus 364 ~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd~LqVkltDs 440 (563)
T KOG1024|consen 364 FVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDDQLQVKLTDS 440 (563)
T ss_pred eEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---CcccchhhhhcceehhheeEEeccc
Confidence 88999999999999998432 23356677788999999999999998 9999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCC
Q 001873 910 GLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT-GRHPLDPTLPG 978 (1001)
Q Consensus 910 gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt-g~~Pf~~~~~~ 978 (1001)
.+++.+.+.++ .+-..+.. ....||+||.+....|+.++|||||||+||||+| |+.|+..-.|.
T Consensus 441 aLSRDLFP~DY-hcLGDnEn----RPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPf 505 (563)
T KOG1024|consen 441 ALSRDLFPGDY-HCLGDNEN----RPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPF 505 (563)
T ss_pred hhccccCcccc-cccCCCCC----CcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHH
Confidence 99998876543 33333322 2357999999999999999999999999999998 99998765443
No 408
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.92 E-value=1.4e-24 Score=231.77 Aligned_cols=184 Identities=33% Similarity=0.463 Sum_probs=163.4
Q ss_pred CCeeEEEEEeC-CCCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCCCCHHHHhhc
Q 001873 778 SSGVVYRVTIP-NGETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHG 853 (1001)
Q Consensus 778 ~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 853 (1001)
+||.||+|+.. +++.||+|++..... .+.+.+|++.+++++|+||+++++++......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999976 489999999865543 57899999999999999999999999988999999999999999999976
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCCCCCCCCccc
Q 001873 854 AGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLA 933 (1001)
Q Consensus 854 ~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~ 933 (1001)
... .++..+..++.+++.++.|||+. +++|+||+|+||++++++.++++|||.+....... ......
T Consensus 81 ~~~--~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--------~~~~~~ 147 (244)
T smart00220 81 RGR--LSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--------LLTTFV 147 (244)
T ss_pred ccC--CCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc--------cccccc
Confidence 433 78999999999999999999998 99999999999999999999999999998764321 223346
Q ss_pred ccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCC
Q 001873 934 GSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974 (1001)
Q Consensus 934 gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~ 974 (1001)
++..|+|||......++.++||||+|+++|++++|+.||..
T Consensus 148 ~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~ 188 (244)
T smart00220 148 GTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPG 188 (244)
T ss_pred CCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 78899999999888889999999999999999999999976
No 409
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.92 E-value=4.3e-24 Score=273.84 Aligned_cols=336 Identities=24% Similarity=0.333 Sum_probs=175.6
Q ss_pred cCCccccccccccCCc------cCCCCChhhhccc-ccceEEccCCcccCCCCccccCCccccceeccccccccccCCCc
Q 001873 122 FGDYRELTFIDLSGNS------LWGEIPTEVCRLR-KLESLYLNTNLLEGEIPSDIGNLSSLAYLTLYDNQLSGKIPKSI 194 (1001)
Q Consensus 122 ~~~l~~L~~L~Ls~n~------l~g~~p~~~~~l~-~L~~L~L~~n~l~~~ip~~l~~L~~L~~L~L~~n~l~g~~p~~~ 194 (1001)
|.++++|++|.+..+. +...+|..+..++ +|+.|++.+|.+. .+|..+ .+.+|++|+|.+|++. .+|..+
T Consensus 554 F~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~ 630 (1153)
T PLN03210 554 FKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGV 630 (1153)
T ss_pred HhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-cccccc
Confidence 4445555555443332 2223444444442 3555555555554 455544 3455555555555554 455555
Q ss_pred cchhhhhhhhhccCcCCCCCCCcccccCccchhccccccccccccCCccccccccceeccccccccccCcccccCCCCCc
Q 001873 195 GALSKLQVFRAGGNQNLKGELPWEIGNCSNLVMLGLAETSISGNVPSSIGMLERIQTIAIYTSLLSGPIPEEIGNCSELQ 274 (1001)
Q Consensus 195 ~~l~~L~~L~l~~n~~l~~~lp~~l~~l~~L~~L~l~~~~l~~~~p~~i~~l~~L~~L~l~~n~l~g~ip~~l~~l~~L~ 274 (1001)
..+++|+.|++++|..+ +.+| .++++++|+.|++++|.....+|.+++++.+|+.|++++|..-+.+|..+ ++++|+
T Consensus 631 ~~l~~Lk~L~Ls~~~~l-~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~ 707 (1153)
T PLN03210 631 HSLTGLRNIDLRGSKNL-KEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLY 707 (1153)
T ss_pred ccCCCCCEEECCCCCCc-CcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCC
Confidence 55555555555554222 2333 24444455555554444333334444333334443333333222333332 344444
Q ss_pred eEeeecCcccCCCCcccCCCCCCcEEEcCCCcccccCCCCccCCCCCCEEeccCCCCCCCCCcccccccCccEEEccccc
Q 001873 275 NLYLYQNSISGPIPGRIGALSKLKSLLLWQNSLVGAIPDELGSCTELTVVDFSDNLLTGSIPRSFGNLLKLQELQLSVNQ 354 (1001)
Q Consensus 275 ~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 354 (1001)
.|++++|. ..+.+|.. .++|+.|++++|.++ .+|..+ .+++|++|++.++.
T Consensus 708 ~L~Lsgc~------------------------~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~ 758 (1153)
T PLN03210 708 RLNLSGCS------------------------RLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMK 758 (1153)
T ss_pred EEeCCCCC------------------------Cccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccc
Confidence 44444443 32233321 223444444444443 233322 24444444444322
Q ss_pred c-------cCcCChhhccccccCEEeccCCcccCccCccccccCcccEEEeecCccCCCCCcccccCcccceEeCcCccc
Q 001873 355 L-------SGTIPIEIATCTALTHLEIDNNAISGEIPADIGNINGLTLFFAWKNKLTGNIPESLSQCQELQALDFSYNNL 427 (1001)
Q Consensus 355 l-------~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l 427 (1001)
. ....+..+...++|+.|++++|...+.+|..++++++|+.|++++|...+.+|... .+++|+.|++++|..
T Consensus 759 ~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~ 837 (1153)
T PLN03210 759 SEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSR 837 (1153)
T ss_pred hhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCc
Confidence 1 11112222334566666666666665666666666667777766665444556554 567777777777654
Q ss_pred cCCCCcccccccccceEEccCCcCCCCCCCCCCCCCCcceEEccc-cccccCCCcccCCCCCcceeeccCcc
Q 001873 428 SGPIPKEIFGLRNLTKLLLLSNDLSGFIPPDIGNCTTLRRLRLND-NRLSGTIPSEMGNLKHLNFVDMSENH 498 (1001)
Q Consensus 428 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~ 498 (1001)
...+|.. ..+|+.|+|++|.++ .+|.++..+++|+.|+|++ |++. .+|..+..+++|+.+++++|.
T Consensus 838 L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 838 LRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred ccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCCc
Confidence 4344432 356778888888887 4677788888888888887 4555 567777888888888887763
No 410
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.91 E-value=3.3e-25 Score=234.15 Aligned_cols=215 Identities=27% Similarity=0.367 Sum_probs=176.3
Q ss_pred HHHHHhcccCCCeEeecCCeeEEEEEeC----CCCEEEEEEecCCCchhhHHHHHHHhhcc-CCCceeeEEeeeecCCce
Q 001873 761 IDDVVRNLTSANVIGTGSSGVVYRVTIP----NGETLAVKKMWSSDESGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLK 835 (1001)
Q Consensus 761 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~~~~ 835 (1001)
...+...|..+++||+|.|++||++... .++.||+|.+.......++.+|++++..+ .+.||+++.+++...+..
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v 110 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQV 110 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhccCCee
Confidence 3445678999999999999999998743 46889999998877778899999999999 589999999999999999
Q ss_pred EEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEEC-CCCcEEEeccccccc
Q 001873 836 LLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLG-PGYQAYLADFGLARI 914 (1001)
Q Consensus 836 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~-~~~~~ki~Dfgla~~ 914 (1001)
.+|+||++...-.++... ++...+..+.+.+..||.++|++ |||||||||+|++.+ ..+.-.|+|||+|..
T Consensus 111 ~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~ 182 (418)
T KOG1167|consen 111 AIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDFGLAQR 182 (418)
T ss_pred EEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEechhHHH
Confidence 999999999998888764 66888889999999999999999 999999999999997 556788999999973
Q ss_pred ccCCC----------------------------------CC---CCCCCCCCCcccccccccCccccc-cCCCCCccchH
Q 001873 915 VSGSG----------------------------------DD---NCSKTNQRPQLAGSYGYMAPEHAS-MQRITEKSDVY 956 (1001)
Q Consensus 915 ~~~~~----------------------------------~~---~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~ 956 (1001)
.+... .. ............||+||.|||++. ...-+.++|||
T Consensus 183 ~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiw 262 (418)
T KOG1167|consen 183 YDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIW 262 (418)
T ss_pred HHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcccee
Confidence 21110 00 001112234567999999999875 45667899999
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCcCcc
Q 001873 957 SFGVVLLEVLTGRHPLDPTLPGGAPLV 983 (1001)
Q Consensus 957 SlG~il~elltg~~Pf~~~~~~~~~l~ 983 (1001)
|.|||+..+++++.||-....+-+.+.
T Consensus 263 s~GVI~Lslls~~~PFf~a~dd~~al~ 289 (418)
T KOG1167|consen 263 SAGVILLSLLSRRYPFFKAKDDADALA 289 (418)
T ss_pred eccceeehhhccccccccCccccchHH
Confidence 999999999999999986654433333
No 411
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=3.2e-24 Score=275.01 Aligned_cols=339 Identities=19% Similarity=0.240 Sum_probs=247.3
Q ss_pred cccccCCCCcEEeccCCc------ccCCCCcccCCcc-ccccccccCCccCCCCChhhhcccccceEEccCCcccCCCCc
Q 001873 96 SIFQPLKSLKRLIISSCN------LTGTIPKEFGDYR-ELTFIDLSGNSLWGEIPTEVCRLRKLESLYLNTNLLEGEIPS 168 (1001)
Q Consensus 96 ~~~~~l~~L~~L~l~~~~------l~g~~p~~~~~l~-~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~L~~n~l~~~ip~ 168 (1001)
..|..+++|+.|.+..+. ....+|+.+..++ +|+.|++.++.+. .+|..+ .+.+|++|+|++|++. .+|.
T Consensus 552 ~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~ 628 (1153)
T PLN03210 552 NAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWD 628 (1153)
T ss_pred HHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-cccc
Confidence 457889999999997653 3456788777764 6999999999987 889887 6799999999999998 7999
Q ss_pred cccCCccccceeccccccccccCCCccchhhhhhhhhccCcCCCCCCCcccccCccchhccccccccccccCCccccccc
Q 001873 169 DIGNLSSLAYLTLYDNQLSGKIPKSIGALSKLQVFRAGGNQNLKGELPWEIGNCSNLVMLGLAETSISGNVPSSIGMLER 248 (1001)
Q Consensus 169 ~l~~L~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~~n~~l~~~lp~~l~~l~~L~~L~l~~~~l~~~~p~~i~~l~~ 248 (1001)
.++.+++|++|+|++|...+.+|. ++.+++|++|++++|..+ ..+|..++++++|+.|++++|...+.+|..+ ++++
T Consensus 629 ~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L-~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~s 705 (1153)
T PLN03210 629 GVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSL-VELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKS 705 (1153)
T ss_pred ccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCc-cccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCC
Confidence 999999999999999876668884 889999999999999544 5899999999999999999998778888877 7999
Q ss_pred cceeccccccccccCcccccCCCCCceEeeecCcccCCCCcccCCCCCCcEEEcCCCcccc-------cCCCCccCCCCC
Q 001873 249 IQTIAIYTSLLSGPIPEEIGNCSELQNLYLYQNSISGPIPGRIGALSKLKSLLLWQNSLVG-------AIPDELGSCTEL 321 (1001)
Q Consensus 249 L~~L~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~-------~~p~~l~~l~~L 321 (1001)
|+.|++++|...+.+|.. .++|++|++++|.+. .+|..+ .+++|++|++.++.... ..+......++|
T Consensus 706 L~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL 780 (1153)
T PLN03210 706 LYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSL 780 (1153)
T ss_pred CCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhccccccccchhhhhccccc
Confidence 999999999776666653 467889999999987 556555 57788888887654321 111111223345
Q ss_pred CEEeccCCCCCCCCCcccccccCccEEEcccccccCcCChhhccccccCEEeccCCcccCccCccccccCcccEEEeecC
Q 001873 322 TVVDFSDNLLTGSIPRSFGNLLKLQELQLSVNQLSGTIPIEIATCTALTHLEIDNNAISGEIPADIGNINGLTLFFAWKN 401 (1001)
Q Consensus 322 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n 401 (1001)
+.|+|++|...+.+|..++++++|+.|++++|. .-+.+|..+ ++++|+.|++++|
T Consensus 781 ~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~------------------------~L~~LP~~~-~L~sL~~L~Ls~c 835 (1153)
T PLN03210 781 TRLFLSDIPSLVELPSSIQNLHKLEHLEIENCI------------------------NLETLPTGI-NLESLESLDLSGC 835 (1153)
T ss_pred hheeCCCCCCccccChhhhCCCCCCEEECCCCC------------------------CcCeeCCCC-CccccCEEECCCC
Confidence 555555554444455555555555555555543 222333333 3445555555544
Q ss_pred ccCCCCCcccccCcccceEeCcCccccCCCCcccccccccceEEccCCcCCCCCCCCCCCCCCcceEEccccc
Q 001873 402 KLTGNIPESLSQCQELQALDFSYNNLSGPIPKEIFGLRNLTKLLLLSNDLSGFIPPDIGNCTTLRRLRLNDNR 474 (1001)
Q Consensus 402 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 474 (1001)
.....+|.. .++|+.|+|++|.++ .+|..+..+++|+.|++++|+--..+|..+..+++|+.+++++|.
T Consensus 836 ~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 836 SRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred Ccccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 333334432 246788888888887 577788888888888888743333567777888888888888774
No 412
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.91 E-value=7.5e-26 Score=235.34 Aligned_cols=274 Identities=23% Similarity=0.254 Sum_probs=141.5
Q ss_pred ccccccCCccCCCCChhhhcccccceEEccCCcccCCCCccccCCccccceeccc-cccccccC-CCccchhhhhhhhhc
Q 001873 129 TFIDLSGNSLWGEIPTEVCRLRKLESLYLNTNLLEGEIPSDIGNLSSLAYLTLYD-NQLSGKIP-KSIGALSKLQVFRAG 206 (1001)
Q Consensus 129 ~~L~Ls~n~l~g~~p~~~~~l~~L~~L~L~~n~l~~~ip~~l~~L~~L~~L~L~~-n~l~g~~p-~~~~~l~~L~~L~l~ 206 (1001)
+.++|..|+|+...|..|+.+++||.||||+|.|+..-|..|.+|.+|-.|-+.+ |+|+ .+| ..|++|.+|+.|.+.
T Consensus 70 veirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~-~l~k~~F~gL~slqrLllN 148 (498)
T KOG4237|consen 70 VEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKIT-DLPKGAFGGLSSLQRLLLN 148 (498)
T ss_pred eEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchh-hhhhhHhhhHHHHHHHhcC
Confidence 4455555555544444555666666666666666655555666666665555544 5555 333 345566666666554
Q ss_pred cCcCCCCCCCcccccCccchhccccccccccccCCccccccccceeccccccccccCcccccCCCCCceEeeecCcccCC
Q 001873 207 GNQNLKGELPWEIGNCSNLVMLGLAETSISGNVPSSIGMLERIQTIAIYTSLLSGPIPEEIGNCSELQNLYLYQNSISGP 286 (1001)
Q Consensus 207 ~n~~l~~~lp~~l~~l~~L~~L~l~~~~l~~~~p~~i~~l~~L~~L~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~i~~~ 286 (1001)
-|. + .-...+.|..+++|..|.+.+|.+..+
T Consensus 149 an~-i------------------------------------------------~Cir~~al~dL~~l~lLslyDn~~q~i 179 (498)
T KOG4237|consen 149 ANH-I------------------------------------------------NCIRQDALRDLPSLSLLSLYDNKIQSI 179 (498)
T ss_pred hhh-h------------------------------------------------cchhHHHHHHhhhcchhcccchhhhhh
Confidence 441 1 111223344445555555555555533
Q ss_pred CCcccCCCCCCcEEEcCCCccc------------ccCCCCccCCCCCCEEeccCCCCCCCCCcccccc-cCccEEEcccc
Q 001873 287 IPGRIGALSKLKSLLLWQNSLV------------GAIPDELGSCTELTVVDFSDNLLTGSIPRSFGNL-LKLQELQLSVN 353 (1001)
Q Consensus 287 ~p~~~~~l~~L~~L~L~~N~l~------------~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~Ls~N 353 (1001)
-..+|..+..++.+.+..|.+. ...|..++...-..-..+.++++..+-+..|... ..+.+=..+.+
T Consensus 180 ~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d 259 (498)
T KOG4237|consen 180 CKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSED 259 (498)
T ss_pred ccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhcccc
Confidence 3335555555555555555421 1233334444444444445555543333333221 11111111222
Q ss_pred cccCcCC-hhhccccccCEEeccCCcccCccCccccccCcccEEEeecCccCCCCCcccccCcccceEeCcCccccCCCC
Q 001873 354 QLSGTIP-IEIATCTALTHLEIDNNAISGEIPADIGNINGLTLFFAWKNKLTGNIPESLSQCQELQALDFSYNNLSGPIP 432 (1001)
Q Consensus 354 ~l~~~~p-~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~ 432 (1001)
...+.-| ..|..+++|+.|+|++|+|++..+.+|..+..+++|++..|++...-...|.++..|+.|+|.+|+|+..-|
T Consensus 260 ~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~ 339 (498)
T KOG4237|consen 260 FPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAP 339 (498)
T ss_pred CcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEec
Confidence 2222223 345666666666666666666666666666666666666666654444556666666666666666666666
Q ss_pred cccccccccceEEccCCcCC
Q 001873 433 KEIFGLRNLTKLLLLSNDLS 452 (1001)
Q Consensus 433 ~~~~~l~~L~~L~L~~N~l~ 452 (1001)
.+|..+..|.+|.|-.|.+.
T Consensus 340 ~aF~~~~~l~~l~l~~Np~~ 359 (498)
T KOG4237|consen 340 GAFQTLFSLSTLNLLSNPFN 359 (498)
T ss_pred ccccccceeeeeehccCccc
Confidence 66666666666666666553
No 413
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.91 E-value=8.8e-27 Score=242.20 Aligned_cols=383 Identities=21% Similarity=0.246 Sum_probs=217.0
Q ss_pred eccccccccccCcccccCCCCCceEeeecCcccCCCCcccCCCCCCcEEEcCC-CcccccCCCCccCCCCCCEEeccCCC
Q 001873 252 IAIYTSLLSGPIPEEIGNCSELQNLYLYQNSISGPIPGRIGALSKLKSLLLWQ-NSLVGAIPDELGSCTELTVVDFSDNL 330 (1001)
Q Consensus 252 L~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~l~~l~~L~~L~Ls~N~ 330 (1001)
+++..|+++...|.+|+.+.+|+.|||++|+|+.+-|++|.++.+|..|-+-+ |+|+....+.|+.+.+|+.|.+.-|+
T Consensus 72 irLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~ 151 (498)
T KOG4237|consen 72 IRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANH 151 (498)
T ss_pred EEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhh
Confidence 34444555544444555555555555555555555555555555555554444 55554444455555555555555555
Q ss_pred CCCCCCcccccccCccEEEcccccccCcCChhhccccccCEEeccCCccc------------CccCccccccCcccEEEe
Q 001873 331 LTGSIPRSFGNLLKLQELQLSVNQLSGTIPIEIATCTALTHLEIDNNAIS------------GEIPADIGNINGLTLFFA 398 (1001)
Q Consensus 331 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~------------~~~~~~~~~l~~L~~L~l 398 (1001)
+.-...+.|..+++|..|.+..|.+..+--..|..+.+++.+.+..|.+. ...|..++...-..-..+
T Consensus 152 i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p~rl 231 (498)
T KOG4237|consen 152 INCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSPYRL 231 (498)
T ss_pred hcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecchHHH
Confidence 55444455555555555555555555222235555555555555555521 112222222222222222
Q ss_pred ecCccCCCCCcccccC-cccc-eEeCcCccccCCCCcccccccccceEEccCCcCCCCCCCCCCCCCCcceEEccccccc
Q 001873 399 WKNKLTGNIPESLSQC-QELQ-ALDFSYNNLSGPIPKEIFGLRNLTKLLLLSNDLSGFIPPDIGNCTTLRRLRLNDNRLS 476 (1001)
Q Consensus 399 ~~n~l~~~~p~~l~~l-~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 476 (1001)
.++++..+.+..|... ..+. .+....+...--..+.|.++++|++|+|++|+++++.+.+|..+..+++|.|..|+|.
T Consensus 232 ~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~ 311 (498)
T KOG4237|consen 232 YYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLE 311 (498)
T ss_pred HHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHH
Confidence 3333332222222211 1111 1111222222122346778888888888888888888888888888888888888888
Q ss_pred cCCCcccCCCCCcceeeccCcccccCCcccccccccCceEEcccccCc------------------ccCCCCcccccccc
Q 001873 477 GTIPSEMGNLKHLNFVDMSENHLVGGIPPSVVGCQSLEFLDLHSNGLT------------------GSVPDTLPTSLQLV 538 (1001)
Q Consensus 477 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~------------------~~~p~~~~~~l~~L 538 (1001)
.+-...|.++..|+.|+|.+|+|+...|.+|..+.+|..|+|-.|.+. |.+|-.-|..++.+
T Consensus 312 ~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~~~~~~~Cq~p~~~~~~ 391 (498)
T KOG4237|consen 312 FVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKSVVGNPRCQSPGFVRQI 391 (498)
T ss_pred HHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhCCCCCCCCCCCCchhccc
Confidence 666677888888888889899888888888888888888888888663 12222223334444
Q ss_pred cCCCCcCCCCcccccccccccceeeccCccccccchhhhh---------cccccc-EEecccccccCCCCCccccccchh
Q 001873 539 DLSDNRLSGSLAHSIGSLTELSKLLLSKNQLSGRIPAEIL---------SCRKLI-LLDIGNNRFSGEIPKELGQISSLE 608 (1001)
Q Consensus 539 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---------~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~ 608 (1001)
.++.+.+... +...|++.+ .++-+. +.-.|++.++ .+|..+.. ...
T Consensus 392 ~~~dv~~~~~---------------------~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk-~lp~~iP~--d~t 447 (498)
T KOG4237|consen 392 PISDVAFGDF---------------------RCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLLK-LLPRGIPV--DVT 447 (498)
T ss_pred cchhcccccc---------------------ccCCccccCCCCCCCCCCCcchhhhhHhhcccchh-hcCCCCCc--hhH
Confidence 4444433211 111222211 112222 2334555554 55554421 222
Q ss_pred hhhhcCCCcccccccccccccccccEEEecCCcCCCCh-hhhhcccccceeEcccC
Q 001873 609 ISLNLSSNQFSGEIPSEFSGLTKLGILDLSHNKLSGDL-DALASLQNLVSLNVSFN 663 (1001)
Q Consensus 609 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~l~~L~~L~ls~N 663 (1001)
.+++.+|.++ .+|.+ .+..| .+||++|+|+..- ..|.++..|.+|-+++|
T Consensus 448 -elyl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 448 -ELYLDGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred -HHhcccchhc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 4888888888 45554 56677 8888888888743 56788888888888876
No 414
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=1.5e-24 Score=211.32 Aligned_cols=226 Identities=21% Similarity=0.262 Sum_probs=189.3
Q ss_pred HhcccCCCeEeecCCeeEEEEE-eCCCCEEEEEEecCCCchhhHHHHHHHhhccCC-CceeeEEeeeecCCceEEEEEcc
Q 001873 765 VRNLTSANVIGTGSSGVVYRVT-IPNGETLAVKKMWSSDESGAFSSEIQTLGSIRH-KNIVRLLGWGSNKNLKLLFYDYL 842 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~Ei~~l~~l~h-~nIv~l~~~~~~~~~~~lv~e~~ 842 (1001)
..+|+++++||.|+||.+|.|. ..+|+.||+|.-.+.....++..|..+.+.+++ ..|..+..+..+..+..+|||..
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL 93 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL 93 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc
Confidence 4789999999999999999998 568999999998777777889999999999975 67888888888999999999998
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECC---CCcEEEecccccccccCCC
Q 001873 843 PNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGP---GYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 843 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~---~~~~ki~Dfgla~~~~~~~ 919 (1001)
|-+|+++..-+ .+.++..+++-.+-|++.-++|+|.+ ++|||||||+|+|+.- -..+.++|||+|+.+.+..
T Consensus 94 -GPsLEdLfnfC-~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~ 168 (341)
T KOG1163|consen 94 -GPSLEDLFNFC-SRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIR 168 (341)
T ss_pred -CccHHHHHHHH-hhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchhhhcccc
Confidence 78999988754 45689999999999999999999998 9999999999999963 3468899999999887666
Q ss_pred CCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcCcccchhhhhcccchh
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPLMFLMLNLE 996 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~~~~~l~~~~~~~~~~~~~~ 996 (1001)
.....+........||.+|.+-....+..-+.+.|+-|+|.++.+.-.|..||.+..+. ...+.+.++.+...+++
T Consensus 169 t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~-tk~QKyEkI~EkK~s~~ 244 (341)
T KOG1163|consen 169 TRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAA-TKKQKYEKISEKKMSTP 244 (341)
T ss_pred ccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchh-hHHHHHHHHHHhhcCCC
Confidence 55556666677789999999988887777788999999999999999999999987533 33344444444433333
No 415
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.91 E-value=3.5e-25 Score=236.87 Aligned_cols=222 Identities=23% Similarity=0.236 Sum_probs=180.7
Q ss_pred ccHHHHH-hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc-hhhHHHHHHHhhccC------CCceeeEEeee
Q 001873 759 FSIDDVV-RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE-SGAFSSEIQTLGSIR------HKNIVRLLGWG 829 (1001)
Q Consensus 759 ~~~~~~~-~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~Ei~~l~~l~------h~nIv~l~~~~ 829 (1001)
+.+.++. .+|.+....|+|-|++|..|.+. .|+.||||+|..... .+.=..|+++|+++. .-|.++++..|
T Consensus 424 v~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F 503 (752)
T KOG0670|consen 424 VRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHF 503 (752)
T ss_pred EehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHh
Confidence 3444443 67999999999999999999865 588999999976543 366778999999994 34789999999
Q ss_pred ecCCceEEEEEccCCCCHHHHhhcCCC-CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCC-CcEEEe
Q 001873 830 SNKNLKLLFYDYLPNGSLSSLLHGAGK-GGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPG-YQAYLA 907 (1001)
Q Consensus 830 ~~~~~~~lv~e~~~~gsL~~~l~~~~~-~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~ki~ 907 (1001)
....++|+|+|-+. .+|.+++++.+. .++....+..++.|+.-||..|-.- +|+|.||||.|||+++. ..+|||
T Consensus 504 ~hknHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iLKLC 579 (752)
T KOG0670|consen 504 KHKNHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNILKLC 579 (752)
T ss_pred hhcceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcceeeec
Confidence 99999999999885 799999988653 4678888999999999999999985 99999999999999865 578999
Q ss_pred cccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcCcccchh
Q 001873 908 DFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTP 987 (1001)
Q Consensus 908 Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~~~~~l~~~~~ 987 (1001)
|||.|.... .+..+++.-+..|.|||++.+.+|+...|+||+||++||+.||+..|-+.+ .=+....
T Consensus 580 DfGSA~~~~---------eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~T----NN~MLrl 646 (752)
T KOG0670|consen 580 DFGSASFAS---------ENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRT----NNQMLRL 646 (752)
T ss_pred cCccccccc---------cccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCC----cHHHHHH
Confidence 999998753 233444556778999999999999999999999999999999998776543 3334444
Q ss_pred hhhcccchhh
Q 001873 988 LMFLMLNLEA 997 (1001)
Q Consensus 988 ~~~~~~~~~~ 997 (1001)
+|.+-|+.|.
T Consensus 647 ~me~KGk~p~ 656 (752)
T KOG0670|consen 647 FMELKGKFPN 656 (752)
T ss_pred HHHhcCCCcH
Confidence 5555555553
No 416
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=9.5e-24 Score=215.00 Aligned_cols=208 Identities=20% Similarity=0.293 Sum_probs=186.6
Q ss_pred hcccCCCeEeecCCeeEEEEE-eCCCCEEEEEEecCCCchhhHHHHHHHhhccC-CCceeeEEeeeecCCceEEEEEccC
Q 001873 766 RNLTSANVIGTGSSGVVYRVT-IPNGETLAVKKMWSSDESGAFSSEIQTLGSIR-HKNIVRLLGWGSNKNLKLLFYDYLP 843 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~Ei~~l~~l~-h~nIv~l~~~~~~~~~~~lv~e~~~ 843 (1001)
-.|++.++||+|+||+++.|+ .-++++||||.-....+..++..|.+..+.+. .++|..++-+.....+-.+|+|.+
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL- 106 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL- 106 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-
Confidence 368999999999999999998 45899999998877777788999999999885 699999998888888889999988
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECC-----CCcEEEecccccccccCC
Q 001873 844 NGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGP-----GYQAYLADFGLARIVSGS 918 (1001)
Q Consensus 844 ~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~-----~~~~ki~Dfgla~~~~~~ 918 (1001)
|-||+|+..-+ .+.++.+++..||.|++.-++|+|++ ..|+|||||+|+||.. ...+.|+|||+|+.+..+
T Consensus 107 GPSLEDLFD~C-gR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp 182 (449)
T KOG1165|consen 107 GPSLEDLFDLC-GRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDP 182 (449)
T ss_pred CcCHHHHHHHh-cCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchhhhcCc
Confidence 78999998766 45689999999999999999999998 9999999999999963 346899999999999888
Q ss_pred CCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCC
Q 001873 919 GDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPG 978 (1001)
Q Consensus 919 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~~ 978 (1001)
......+........||.+||+-.-..++.-+.+.|+-|+|-++++.+.|..||.+...+
T Consensus 183 ~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~ 242 (449)
T KOG1165|consen 183 KTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAD 242 (449)
T ss_pred cccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCc
Confidence 777777788888899999999999999999999999999999999999999999987543
No 417
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.90 E-value=4e-25 Score=243.58 Aligned_cols=195 Identities=27% Similarity=0.385 Sum_probs=168.9
Q ss_pred HhcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC--CchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS--DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
.++|+....+|.|.||.|||+++. .++..|||.++-+ ++.+-..+|+-+++.++|||||.++|.+...+..|++|||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence 467899999999999999999965 6899999988654 3456788999999999999999999999888899999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDD 921 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~ 921 (1001)
|.+|+|++.-+-.+ .+++.++..+.+...+|++|+|++ +-+|||||-.||++++.|.+|++|||.+..+..
T Consensus 94 cgggslQdiy~~Tg--plselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqita---- 164 (829)
T KOG0576|consen 94 CGGGSLQDIYHVTG--PLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITA---- 164 (829)
T ss_pred cCCCcccceeeecc--cchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhh----
Confidence 99999999887654 478888888999999999999998 889999999999999999999999999877642
Q ss_pred CCCCCCCCCcccccccccCcccc---ccCCCCCccchHHHHHHHHHHHhCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHA---SMQRITEKSDVYSFGVVLLEVLTGRHP 971 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~SlG~il~elltg~~P 971 (1001)
....+....||+.|||||+. +.+.|...+|||+.|+...|+---..|
T Consensus 165 ---ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpp 214 (829)
T KOG0576|consen 165 ---TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPP 214 (829)
T ss_pred ---hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCc
Confidence 22345567899999999976 457899999999999999887654444
No 418
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.89 E-value=2.1e-22 Score=209.57 Aligned_cols=181 Identities=33% Similarity=0.533 Sum_probs=158.4
Q ss_pred EeecCCeeEEEEEeCC-CCEEEEEEecCCCc---hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCCCCHHH
Q 001873 774 IGTGSSGVVYRVTIPN-GETLAVKKMWSSDE---SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSS 849 (1001)
Q Consensus 774 lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~ 849 (1001)
||+|.+|.||+++... ++++++|++..... .+.+.+|++.++.++|++|+++++++......++++||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999754 89999999976655 3789999999999999999999999998899999999999999999
Q ss_pred HhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECC-CCcEEEecccccccccCCCCCCCCCCCC
Q 001873 850 LLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGP-GYQAYLADFGLARIVSGSGDDNCSKTNQ 928 (1001)
Q Consensus 850 ~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~-~~~~ki~Dfgla~~~~~~~~~~~~~~~~ 928 (1001)
++.... ...++..+..++.++++++.|||+. +++|+||+|.||+++. ++.++|+|||.+........ .
T Consensus 81 ~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-------~ 149 (215)
T cd00180 81 LLKENE-GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-------L 149 (215)
T ss_pred HHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-------h
Confidence 998642 3578999999999999999999998 9999999999999999 89999999999986543211 1
Q ss_pred CCcccccccccCccccccC-CCCCccchHHHHHHHHHH
Q 001873 929 RPQLAGSYGYMAPEHASMQ-RITEKSDVYSFGVVLLEV 965 (1001)
Q Consensus 929 ~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlG~il~el 965 (1001)
.....+...|++||..... .++.++|+|++|++++++
T Consensus 150 ~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l 187 (215)
T cd00180 150 LKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187 (215)
T ss_pred hhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH
Confidence 2223577899999998876 888999999999999998
No 419
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=6.2e-23 Score=226.23 Aligned_cols=167 Identities=22% Similarity=0.203 Sum_probs=129.6
Q ss_pred HHhcccCCCeEeecCCeeEEEEEeC--CCCEEEEEEecCCC-------chhhHHHHHHHhhccCCCceee-EEeeeecCC
Q 001873 764 VVRNLTSANVIGTGSSGVVYRVTIP--NGETLAVKKMWSSD-------ESGAFSSEIQTLGSIRHKNIVR-LLGWGSNKN 833 (1001)
Q Consensus 764 ~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~~~~~~-------~~~~~~~Ei~~l~~l~h~nIv~-l~~~~~~~~ 833 (1001)
+...|++.+.||+|+||+||+|+++ +++.||||++.... ..+.+.+|++++++++|+||++ ++++ +
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----~ 91 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----G 91 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----C
Confidence 4578999999999999999999865 57778999864321 1356899999999999999985 4432 4
Q ss_pred ceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCC-CCCCeEECCCCcEEEeccccc
Q 001873 834 LKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDV-KAMNVLLGPGYQAYLADFGLA 912 (1001)
Q Consensus 834 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dl-kp~NIll~~~~~~ki~Dfgla 912 (1001)
..++||||++|++|... .. . . ...++.|+++|+.|+|+. +|+|||| ||+||+++.++++||+|||+|
T Consensus 92 ~~~LVmE~~~G~~L~~~-~~--~---~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFGlA 159 (365)
T PRK09188 92 KDGLVRGWTEGVPLHLA-RP--H---G---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQLA 159 (365)
T ss_pred CcEEEEEccCCCCHHHh-Cc--c---c---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECccc
Confidence 57999999999999732 11 1 1 145788999999999998 9999999 999999999999999999999
Q ss_pred ccccCCCCCCCC-CCCCCCcccccccccCcccccc
Q 001873 913 RIVSGSGDDNCS-KTNQRPQLAGSYGYMAPEHASM 946 (1001)
Q Consensus 913 ~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~ 946 (1001)
+.+......... ....-....+++.|+|||.+..
T Consensus 160 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 160 SVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred eecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 987554322111 1112245678999999998854
No 420
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.89 E-value=1.4e-22 Score=240.68 Aligned_cols=268 Identities=28% Similarity=0.386 Sum_probs=158.5
Q ss_pred CCCceEeeecCcccCCCCcccCCCCCCcEEEcCCCcccccCCCCccCCCCCCEEeccCCCCCCCCCcccccccCccEEEc
Q 001873 271 SELQNLYLYQNSISGPIPGRIGALSKLKSLLLWQNSLVGAIPDELGSCTELTVVDFSDNLLTGSIPRSFGNLLKLQELQL 350 (1001)
Q Consensus 271 ~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 350 (1001)
.+-..|+|++|.++ .+|..+. ++|+.|++++|+++ .+|.. .++|++|+|++|+|+ .+|.. .++|+.|+|
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~L 269 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLT-SLPVL---PPGLLELSI 269 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccC-cccCc---ccccceeec
Confidence 44667888888888 5677665 37888888888888 45542 467888888888887 44542 356777788
Q ss_pred ccccccCcCChhhccccccCEEeccCCcccCccCccccccCcccEEEeecCccCCCCCcccccCcccceEeCcCccccCC
Q 001873 351 SVNQLSGTIPIEIATCTALTHLEIDNNAISGEIPADIGNINGLTLFFAWKNKLTGNIPESLSQCQELQALDFSYNNLSGP 430 (1001)
Q Consensus 351 s~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 430 (1001)
++|+++ .+|.. .++|+.|++++|+++. +|.. +++ |+.|++++|+|++
T Consensus 270 s~N~L~-~Lp~l---p~~L~~L~Ls~N~Lt~-LP~~---p~~------------------------L~~LdLS~N~L~~- 316 (788)
T PRK15387 270 FSNPLT-HLPAL---PSGLCKLWIFGNQLTS-LPVL---PPG------------------------LQELSVSDNQLAS- 316 (788)
T ss_pred cCCchh-hhhhc---hhhcCEEECcCCcccc-cccc---ccc------------------------cceeECCCCcccc-
Confidence 877776 33332 2456667777777662 3321 233 4445555554442
Q ss_pred CCcccccccccceEEccCCcCCCCCCCCCCCCCCcceEEccccccccCCCcccCCCCCcceeeccCcccccCCccccccc
Q 001873 431 IPKEIFGLRNLTKLLLLSNDLSGFIPPDIGNCTTLRRLRLNDNRLSGTIPSEMGNLKHLNFVDMSENHLVGGIPPSVVGC 510 (1001)
Q Consensus 431 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 510 (1001)
+|.. ..+|+.|++++|++++ +|.. ..+|+.|+|++|+|+ .+|... .+|+.|++++|+|++ +|.. .
T Consensus 317 Lp~l---p~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls-~LP~lp---~~L~~L~Ls~N~L~~-LP~l---~ 381 (788)
T PRK15387 317 LPAL---PSELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLA-SLPTLP---SELYKLWAYNNRLTS-LPAL---P 381 (788)
T ss_pred CCCC---cccccccccccCcccc-cccc---ccccceEecCCCccC-CCCCCC---cccceehhhcccccc-Cccc---c
Confidence 2221 1234445555555543 2221 134556666666665 233322 345555666666653 4432 2
Q ss_pred ccCceEEcccccCcccCCCCcccccccccCCCCcCCCCcccccccccccceeeccCccccccchhhhhccccccEEeccc
Q 001873 511 QSLEFLDLHSNGLTGSVPDTLPTSLQLVDLSDNRLSGSLAHSIGSLTELSKLLLSKNQLSGRIPAEILSCRKLILLDIGN 590 (1001)
Q Consensus 511 ~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 590 (1001)
.+|+.|++++|+|++ +|. .+..++.|++++|+|++ +|.. ..+|+.|++++|+|+ .+|..+..+++|+.|+|++
T Consensus 382 ~~L~~LdLs~N~Lt~-LP~-l~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~ 454 (788)
T PRK15387 382 SGLKELIVSGNRLTS-LPV-LPSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEG 454 (788)
T ss_pred cccceEEecCCcccC-CCC-cccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCC
Confidence 356666666666663 332 23456666666666664 3432 235677777777777 6677777777777888888
Q ss_pred ccccCCCCCccccc
Q 001873 591 NRFSGEIPKELGQI 604 (1001)
Q Consensus 591 N~l~~~~p~~~~~l 604 (1001)
|+|++..|..+..+
T Consensus 455 N~Ls~~~~~~L~~l 468 (788)
T PRK15387 455 NPLSERTLQALREI 468 (788)
T ss_pred CCCCchHHHHHHHH
Confidence 87777666655433
No 421
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.89 E-value=2.4e-22 Score=238.65 Aligned_cols=266 Identities=26% Similarity=0.357 Sum_probs=187.6
Q ss_pred cceeccccccccccCcccccCCCCCceEeeecCcccCCCCcccCCCCCCcEEEcCCCcccccCCCCccCCCCCCEEeccC
Q 001873 249 IQTIAIYTSLLSGPIPEEIGNCSELQNLYLYQNSISGPIPGRIGALSKLKSLLLWQNSLVGAIPDELGSCTELTVVDFSD 328 (1001)
Q Consensus 249 L~~L~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~ 328 (1001)
-..|+++.+.++ .+|+.+. ++|+.|++.+|+++. +|. .+++|++|+|++|+++ .+|.. .++|+.|++++
T Consensus 203 ~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~ 271 (788)
T PRK15387 203 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPVL---PPGLLELSIFS 271 (788)
T ss_pred CcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccC-cccCc---ccccceeeccC
Confidence 467889999998 7898876 489999999999994 554 3589999999999999 45653 46899999999
Q ss_pred CCCCCCCCcccccccCccEEEcccccccCcCChhhccccccCEEeccCCcccCccCccccccCcccEEEeecCccCCCCC
Q 001873 329 NLLTGSIPRSFGNLLKLQELQLSVNQLSGTIPIEIATCTALTHLEIDNNAISGEIPADIGNINGLTLFFAWKNKLTGNIP 408 (1001)
Q Consensus 329 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~p 408 (1001)
|.++ .+|..+ .+|+.|++++|+++ .+|. ..++|+.|++++|+|++ +|... .+|+.|++++|++++ +|
T Consensus 272 N~L~-~Lp~lp---~~L~~L~Ls~N~Lt-~LP~---~p~~L~~LdLS~N~L~~-Lp~lp---~~L~~L~Ls~N~L~~-LP 338 (788)
T PRK15387 272 NPLT-HLPALP---SGLCKLWIFGNQLT-SLPV---LPPGLQELSVSDNQLAS-LPALP---SELCKLWAYNNQLTS-LP 338 (788)
T ss_pred Cchh-hhhhch---hhcCEEECcCCccc-cccc---cccccceeECCCCcccc-CCCCc---ccccccccccCcccc-cc
Confidence 9998 456533 57889999999998 4554 34789999999999985 34321 234455555555542 33
Q ss_pred cccccCcccceEeCcCccccCCCCcccccccccceEEccCCcCCCCCCCCCCCCCCcceEEccccccccCCCcccCCCCC
Q 001873 409 ESLSQCQELQALDFSYNNLSGPIPKEIFGLRNLTKLLLLSNDLSGFIPPDIGNCTTLRRLRLNDNRLSGTIPSEMGNLKH 488 (1001)
Q Consensus 409 ~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 488 (1001)
.. . .+|+.|+|++|+|++ +|.. ..+|+.|++++|+|+ .+|... .+
T Consensus 339 ~l---p------------------------~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~-~LP~l~---~~ 383 (788)
T PRK15387 339 TL---P------------------------SGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPALP---SG 383 (788)
T ss_pred cc---c------------------------cccceEecCCCccCC-CCCC---Ccccceehhhccccc-cCcccc---cc
Confidence 21 1 234455555555543 2221 134555666666666 344322 35
Q ss_pred cceeeccCcccccCCcccccccccCceEEcccccCcccCCCCcccccccccCCCCcCCCCcccccccccccceeeccCcc
Q 001873 489 LNFVDMSENHLVGGIPPSVVGCQSLEFLDLHSNGLTGSVPDTLPTSLQLVDLSDNRLSGSLAHSIGSLTELSKLLLSKNQ 568 (1001)
Q Consensus 489 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 568 (1001)
|+.|++++|+|++ +|.. .++|+.|++++|+|++ +|. ++..++.|++++|+|+ .+|..+..+++|+.|+|++|+
T Consensus 384 L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~-l~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~ 456 (788)
T PRK15387 384 LKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPM-LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNP 456 (788)
T ss_pred cceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCc-chhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCC
Confidence 6677777777763 4432 2567788888888874 554 3456777899999998 678889999999999999999
Q ss_pred ccccchhhhhcc
Q 001873 569 LSGRIPAEILSC 580 (1001)
Q Consensus 569 l~~~~p~~~~~l 580 (1001)
|++..|..+..+
T Consensus 457 Ls~~~~~~L~~l 468 (788)
T PRK15387 457 LSERTLQALREI 468 (788)
T ss_pred CCchHHHHHHHH
Confidence 999888877443
No 422
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.88 E-value=1.8e-22 Score=241.66 Aligned_cols=246 Identities=29% Similarity=0.458 Sum_probs=125.5
Q ss_pred ccccccccCCccCCCCChhhhcccccceEEccCCcccCCCCccccCCccccceeccccccccccCCCccchhhhhhhhhc
Q 001873 127 ELTFIDLSGNSLWGEIPTEVCRLRKLESLYLNTNLLEGEIPSDIGNLSSLAYLTLYDNQLSGKIPKSIGALSKLQVFRAG 206 (1001)
Q Consensus 127 ~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~L~~n~l~~~ip~~l~~L~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~l~ 206 (1001)
+.+.|++++++++ .+|..+. ++|+.|+|++|+++ .+|..+. ++|++|++++|+++ .+|..+. .+|+.|+++
T Consensus 179 ~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls 249 (754)
T PRK15370 179 NKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELS 249 (754)
T ss_pred CceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECc
Confidence 4556666666666 4565543 45666666666666 5665543 36666666666666 5565443 356666666
Q ss_pred cCcCCCCCCCcccccCccchhccccccccccccCCccccccccceeccccccccccCcccccCCCCCceEeeecCcccCC
Q 001873 207 GNQNLKGELPWEIGNCSNLVMLGLAETSISGNVPSSIGMLERIQTIAIYTSLLSGPIPEEIGNCSELQNLYLYQNSISGP 286 (1001)
Q Consensus 207 ~n~~l~~~lp~~l~~l~~L~~L~l~~~~l~~~~p~~i~~l~~L~~L~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~i~~~ 286 (1001)
+| .+. .+|..+. ++|+.|++++|.+. . +|..+. ++|+.|++++|++++
T Consensus 250 ~N-~L~-~LP~~l~--s~L~~L~Ls~N~L~-~------------------------LP~~l~--~sL~~L~Ls~N~Lt~- 297 (754)
T PRK15370 250 IN-RIT-ELPERLP--SALQSLDLFHNKIS-C------------------------LPENLP--EELRYLSVYDNSIRT- 297 (754)
T ss_pred CC-ccC-cCChhHh--CCCCEEECcCCccC-c------------------------cccccC--CCCcEEECCCCcccc-
Confidence 66 333 4554432 24555555554444 2 333222 245555555555553
Q ss_pred CCcccCCCCCCcEEEcCCCcccccCCCCccCCCCCCEEeccCCCCCCCCCcccccccCccEEEcccccccCcCChhhccc
Q 001873 287 IPGRIGALSKLKSLLLWQNSLVGAIPDELGSCTELTVVDFSDNLLTGSIPRSFGNLLKLQELQLSVNQLSGTIPIEIATC 366 (1001)
Q Consensus 287 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 366 (1001)
+|..+. ++|+.|++++|+++. +|..+. ++|+.|++++|.+++ +|..+. ++|+.|+|++|+|+ .+|..+.
T Consensus 298 LP~~lp--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp-- 366 (754)
T PRK15370 298 LPAHLP--SGITHLNVQSNSLTA-LPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP-- 366 (754)
T ss_pred Ccccch--hhHHHHHhcCCcccc-CCcccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--
Confidence 333222 245556666666552 343332 356666666666653 444442 45666666666665 3444332
Q ss_pred cccCEEeccCCcccCccCccccccCcccEEEeecCccCCCCCc----ccccCcccceEeCcCcccc
Q 001873 367 TALTHLEIDNNAISGEIPADIGNINGLTLFFAWKNKLTGNIPE----SLSQCQELQALDFSYNNLS 428 (1001)
Q Consensus 367 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~----~l~~l~~L~~L~Ls~N~l~ 428 (1001)
++|+.|++++|+++ .+|..+. ..|+.|++++|+++ .+|. .+..++.+..|++.+|.++
T Consensus 367 ~~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 367 PTITTLDVSRNALT-NLPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred CCcCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 45666666666655 2333221 13344444444443 2222 2222344455555555544
No 423
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=1.5e-21 Score=216.86 Aligned_cols=206 Identities=26% Similarity=0.347 Sum_probs=169.0
Q ss_pred cccCCCeEeecCCeeEEEEEeCCC--CEEEEEEecCCCch--hhHHHHHHHhhccCC----CceeeEEeee-ecCCceEE
Q 001873 767 NLTSANVIGTGSSGVVYRVTIPNG--ETLAVKKMWSSDES--GAFSSEIQTLGSIRH----KNIVRLLGWG-SNKNLKLL 837 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~~~--~~vavK~~~~~~~~--~~~~~Ei~~l~~l~h----~nIv~l~~~~-~~~~~~~l 837 (1001)
+|++.+.||+|+||.||.|..... ..+|+|........ ..+..|+.++..+.. +++..+++.. ......++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 799999999999999999997543 47888877554332 268889999988862 6899999888 57778899
Q ss_pred EEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCC-----CcEEEeccccc
Q 001873 838 FYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPG-----YQAYLADFGLA 912 (1001)
Q Consensus 838 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~-----~~~ki~Dfgla 912 (1001)
||+.+ |.+|.++........++..+..+|+.|++.+|+++|+. |++||||||.|+.+... ..+.+.|||+|
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99988 78999998776667799999999999999999999998 99999999999999854 46999999999
Q ss_pred cccc--CCCCCC-CCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 913 RIVS--GSGDDN-CSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 913 ~~~~--~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
+.+. ...... ...........||.+|+++++..+...+.+.|+||++.++.|+..|..||....
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~ 241 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALE 241 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCcccc
Confidence 9332 222111 111111234569999999999999999999999999999999999999997654
No 424
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.84 E-value=4e-21 Score=230.10 Aligned_cols=247 Identities=28% Similarity=0.493 Sum_probs=137.3
Q ss_pred CCCceEeeecCcccCCCCcccCCCCCCcEEEcCCCcccccCCCCccCCCCCCEEeccCCCCCCCCCcccccccCccEEEc
Q 001873 271 SELQNLYLYQNSISGPIPGRIGALSKLKSLLLWQNSLVGAIPDELGSCTELTVVDFSDNLLTGSIPRSFGNLLKLQELQL 350 (1001)
Q Consensus 271 ~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 350 (1001)
.+.+.|+++++.++ .+|..+. ++|+.|+|++|+++ .+|..+. ++|+.|++++|+++ .+|..+. .+|+.|+|
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~L 248 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMEL 248 (754)
T ss_pred cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEEC
Confidence 35678888888887 4566553 47888888888887 4565543 47888888888877 4565443 36777777
Q ss_pred ccccccCcCChhhccccccCEEeccCCcccCccCccccccCcccEEEeecCccCCCCCcccccCcccceEeCcCccccCC
Q 001873 351 SVNQLSGTIPIEIATCTALTHLEIDNNAISGEIPADIGNINGLTLFFAWKNKLTGNIPESLSQCQELQALDFSYNNLSGP 430 (1001)
Q Consensus 351 s~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 430 (1001)
++|++. .+|..+. ++|+.|++++|+|+ .+|..+ . ++|+.|++++|++++
T Consensus 249 s~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l------------------------~--~sL~~L~Ls~N~Lt~- 297 (754)
T PRK15370 249 SINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENL------------------------P--EELRYLSVYDNSIRT- 297 (754)
T ss_pred cCCccC-cCChhHh--CCCCEEECcCCccC-cccccc------------------------C--CCCcEEECCCCcccc-
Confidence 777776 4555443 35666666666665 233322 1 245555555555552
Q ss_pred CCcccccccccceEEccCCcCCCCCCCCCCCCCCcceEEccccccccCCCcccCCCCCcceeeccCcccccCCccccccc
Q 001873 431 IPKEIFGLRNLTKLLLLSNDLSGFIPPDIGNCTTLRRLRLNDNRLSGTIPSEMGNLKHLNFVDMSENHLVGGIPPSVVGC 510 (1001)
Q Consensus 431 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 510 (1001)
+|..+. ++|+.|++++|+++. +|..+ .++|+.|++++|.+++ +|..+. ++|+.|++++|+|+ .+|..+ .
T Consensus 298 LP~~lp--~sL~~L~Ls~N~Lt~-LP~~l--~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~l--p 366 (754)
T PRK15370 298 LPAHLP--SGITHLNVQSNSLTA-LPETL--PPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETL--P 366 (754)
T ss_pred Ccccch--hhHHHHHhcCCcccc-CCccc--cccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhh--c
Confidence 232221 245555555555553 23222 1456666666666653 444332 45666666666665 344433 2
Q ss_pred ccCceEEcccccCcccCCCCcccccccccCCCCcCCCCcccc----cccccccceeeccCcccc
Q 001873 511 QSLEFLDLHSNGLTGSVPDTLPTSLQLVDLSDNRLSGSLAHS----IGSLTELSKLLLSKNQLS 570 (1001)
Q Consensus 511 ~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~Ls~N~l~~~~~~~----~~~l~~L~~L~Ls~N~l~ 570 (1001)
++|+.|++++|+|+ .+|..++..++.|++++|+|++ +|.. ++.++++..|++.+|+++
T Consensus 367 ~~L~~LdLs~N~Lt-~LP~~l~~sL~~LdLs~N~L~~-LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 367 PTITTLDVSRNALT-NLPENLPAALQIMQASRNNLVR-LPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred CCcCEEECCCCcCC-CCCHhHHHHHHHHhhccCCccc-CchhHHHHhhcCCCccEEEeeCCCcc
Confidence 45666666666666 3444444455555555555552 2222 222344455555555544
No 425
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.83 E-value=3e-20 Score=185.38 Aligned_cols=196 Identities=15% Similarity=0.113 Sum_probs=144.7
Q ss_pred cCCCeEeecCCeeEEEEEeCCCCEEEEEEecCCCc------hhhHHHHHHHhhccC-CCceeeEEeeeecCCceEEEEEc
Q 001873 769 TSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDE------SGAFSSEIQTLGSIR-HKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 769 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~Ei~~l~~l~-h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
.+...|++|+||+||.+.. .+.+++.+.+..... ...+.+|++++++++ |++|++++++ ...+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 3567899999999998766 678888777644332 125789999999995 5889999886 346899999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCC-CCCCeEECCCCcEEEecccccccccCCCC
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDV-KAMNVLLGPGYQAYLADFGLARIVSGSGD 920 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dl-kp~NIll~~~~~~ki~Dfgla~~~~~~~~ 920 (1001)
++|.+|.+.... ....++.|++.+++++|+. ||+|||| ||+||+++.++.++|+|||+|........
T Consensus 80 I~G~~L~~~~~~---------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~ 147 (218)
T PRK12274 80 LAGAAMYQRPPR---------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRAR 147 (218)
T ss_pred ecCccHHhhhhh---------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcch
Confidence 999999765421 1134678999999999999 9999999 79999999999999999999986432211
Q ss_pred C------CCCCCCCCCcccccccccCcccccc-CCCC-CccchHHHHHHHHHHHhCCCCCCCCCCCCcC
Q 001873 921 D------NCSKTNQRPQLAGSYGYMAPEHASM-QRIT-EKSDVYSFGVVLLEVLTGRHPLDPTLPGGAP 981 (1001)
Q Consensus 921 ~------~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~-~~~Dv~SlG~il~elltg~~Pf~~~~~~~~~ 981 (1001)
- .....-.......++.|++|+.-.. ...+ ...+-++-|+.+|.++||+.|..++.++..+
T Consensus 148 ~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~~~~~ 216 (218)
T PRK12274 148 WMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDNEGQGP 216 (218)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccCCCCCC
Confidence 0 0000000111236788888885432 2333 5678889999999999999999888776543
No 426
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.82 E-value=1.2e-20 Score=235.17 Aligned_cols=154 Identities=17% Similarity=0.170 Sum_probs=115.3
Q ss_pred ccCC-CceeeEEeee-------ecCCceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeE
Q 001873 816 SIRH-KNIVRLLGWG-------SNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPIL 887 (1001)
Q Consensus 816 ~l~h-~nIv~l~~~~-------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iv 887 (1001)
.++| +||+++++++ ...+..+.++||+ +++|.+++++. ...+++..++.++.||++||+|||++ +|+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---gIv 102 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQ---GIV 102 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence 4556 6888888877 2334567788988 57999999754 34589999999999999999999998 999
Q ss_pred EeCCCCCCeEECCCC-------------------cEEEecccccccccCCCCC---CC------CCCCCCCccccccccc
Q 001873 888 HGDVKAMNVLLGPGY-------------------QAYLADFGLARIVSGSGDD---NC------SKTNQRPQLAGSYGYM 939 (1001)
Q Consensus 888 H~Dlkp~NIll~~~~-------------------~~ki~Dfgla~~~~~~~~~---~~------~~~~~~~~~~gt~~y~ 939 (1001)
||||||+|||++..+ .+|++|||+++........ .. .........+||+.||
T Consensus 103 HrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 182 (793)
T PLN00181 103 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYT 182 (793)
T ss_pred eccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceE
Confidence 999999999996544 4555566655432110000 00 0000112246899999
Q ss_pred CccccccCCCCCccchHHHHHHHHHHHhCCCCCCC
Q 001873 940 APEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974 (1001)
Q Consensus 940 aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~ 974 (1001)
|||++.+..|+.++|||||||++|||++|..|+..
T Consensus 183 APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~ 217 (793)
T PLN00181 183 SPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREE 217 (793)
T ss_pred ChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhh
Confidence 99999999999999999999999999999988764
No 427
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.81 E-value=4.4e-19 Score=198.97 Aligned_cols=203 Identities=32% Similarity=0.471 Sum_probs=169.1
Q ss_pred ccCCCeEeecCCeeEEEEEeCCCCEEEEEEecCCCc-----hhhHHHHHHHhhccCCC-ceeeEEeeeecCCceEEEEEc
Q 001873 768 LTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDE-----SGAFSSEIQTLGSIRHK-NIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 768 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~Ei~~l~~l~h~-nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
|+..+.+|.|+||.||++... ..+|+|.+..... ...+.+|+.+++.+.|+ +|+++.+.+......+++++|
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 667788999999999999986 8899998854432 45689999999999988 799999999777778999999
Q ss_pred cCCCCHHHHhhcCCC-CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCC-cEEEecccccccccCCC
Q 001873 842 LPNGSLSSLLHGAGK-GGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGY-QAYLADFGLARIVSGSG 919 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~-~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~-~~ki~Dfgla~~~~~~~ 919 (1001)
+.++++.+++..... ...+......++.|++.+++|+|+. +++|||+||+||+++..+ .++++|||.++......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 999999987775432 2578889999999999999999998 999999999999999988 79999999998654332
Q ss_pred CCCCCCCCCCCcccccccccCcccccc---CCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHASM---QRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
...... .......||..|+|||.... ..+....|+||+|++++++++|+.||....
T Consensus 157 ~~~~~~-~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~ 215 (384)
T COG0515 157 STSSIP-ALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEK 215 (384)
T ss_pred cccccc-ccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 111000 13455689999999999987 678899999999999999999999976554
No 428
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.81 E-value=6.9e-20 Score=186.15 Aligned_cols=137 Identities=20% Similarity=0.201 Sum_probs=107.5
Q ss_pred CCeEeecCCeeEEEEEeCCCCEEEEEEecCCCc-----------hhhH-----------------HHHHHHhhccCCCce
Q 001873 771 ANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDE-----------SGAF-----------------SSEIQTLGSIRHKNI 822 (1001)
Q Consensus 771 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-----------~~~~-----------------~~Ei~~l~~l~h~nI 822 (1001)
...||+|+||.||+|..++|++||||+++.... ...| .+|++.++++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 467999999999999988899999999864321 1122 349999999988776
Q ss_pred eeEEeeeecCCceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH-hhCCCCCeEEeCCCCCCeEECCC
Q 001873 823 VRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYL-HHDCMPPILHGDVKAMNVLLGPG 901 (1001)
Q Consensus 823 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yL-H~~~~~~ivH~Dlkp~NIll~~~ 901 (1001)
.....+... ..++||||++++++...... ...++..++.+++.|++.++.|+ |+. +|+||||||+||+++ +
T Consensus 82 ~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~-~ 153 (190)
T cd05147 82 PCPEPILLK--SHVLVMEFIGDDGWAAPRLK--DAPLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH-D 153 (190)
T ss_pred CCCcEEEec--CCEEEEEEeCCCCCcchhhh--cCCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE-C
Confidence 443332222 23899999998877655332 23578899999999999999999 677 999999999999998 4
Q ss_pred CcEEEecccccccc
Q 001873 902 YQAYLADFGLARIV 915 (1001)
Q Consensus 902 ~~~ki~Dfgla~~~ 915 (1001)
+.++++|||+|...
T Consensus 154 ~~v~LiDFG~a~~~ 167 (190)
T cd05147 154 GKLYIIDVSQSVEH 167 (190)
T ss_pred CcEEEEEccccccC
Confidence 78999999999753
No 429
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.81 E-value=2.9e-20 Score=190.21 Aligned_cols=169 Identities=12% Similarity=0.139 Sum_probs=131.9
Q ss_pred HHhcccCCCeEeecCCeeEEEEEeCCCCEEEEEEecCCCch--h---------hHHHHHHHhhccCCCceeeEEeeeecC
Q 001873 764 VVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDES--G---------AFSSEIQTLGSIRHKNIVRLLGWGSNK 832 (1001)
Q Consensus 764 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~--~---------~~~~Ei~~l~~l~h~nIv~l~~~~~~~ 832 (1001)
+..+|+..+++|.|+||.||.+.. ++..+|||.+...... + .+.+|++.++++.||+|..+.+++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 457899999999999999999766 5778999998543211 1 268999999999999999998875432
Q ss_pred --------CceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcE
Q 001873 833 --------NLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQA 904 (1001)
Q Consensus 833 --------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 904 (1001)
+..++||||++|.+|.++.. .+. ....+++.++..+|+. +++|||+||+||+++++| +
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g-i 173 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG-L 173 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC-E
Confidence 35789999999999988742 222 2456899999999998 999999999999999988 9
Q ss_pred EEecccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHH
Q 001873 905 YLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVL 966 (1001)
Q Consensus 905 ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ell 966 (1001)
+++|||.++...... ........+.|+.++|+||||+.+....
T Consensus 174 ~liDfg~~~~~~e~~-------------------a~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 174 RIIDLSGKRCTAQRK-------------------AKDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEECCCcccccchh-------------------hHHHHHHHhHhcccccccceeEeehHHH
Confidence 999999886542110 0011344556778999999999887543
No 430
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.81 E-value=1.6e-20 Score=185.98 Aligned_cols=193 Identities=23% Similarity=0.307 Sum_probs=156.1
Q ss_pred ccCCCeEeecCCeeEEEEEeCCCCEEEEEEecC----CCchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccC
Q 001873 768 LTSANVIGTGSSGVVYRVTIPNGETLAVKKMWS----SDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLP 843 (1001)
Q Consensus 768 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~----~~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~ 843 (1001)
.....+|.+...|+.|+|+|+ |..+++|++.- ...+++|..|.-.++.+.||||++++|.|.......++..||+
T Consensus 192 lnl~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp 270 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMP 270 (448)
T ss_pred hhhhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeecc
Confidence 344567899999999999995 56666776533 3345789999999999999999999999999999999999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEe--cccccccccCCCCC
Q 001873 844 NGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLA--DFGLARIVSGSGDD 921 (1001)
Q Consensus 844 ~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~--Dfgla~~~~~~~~~ 921 (1001)
.|+|+..+++......+..++.+++.++|+|+.|||+- .+-|-.--+.++.+++|++.+++|. |--.+.+.
T Consensus 271 ~gslynvlhe~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsfqe------ 343 (448)
T KOG0195|consen 271 FGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQE------ 343 (448)
T ss_pred chHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeeeec------
Confidence 99999999987766678889999999999999999994 2334444688999999999988764 43333221
Q ss_pred CCCCCCCCCcccccccccCccccccCCCC---CccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 922 NCSKTNQRPQLAGSYGYMAPEHASMQRIT---EKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 922 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~---~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
......|.||+||.++.++-+ .++|+|||++++||+.|++.||....
T Consensus 344 --------~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadls 393 (448)
T KOG0195|consen 344 --------VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLS 393 (448)
T ss_pred --------cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCC
Confidence 112456889999999776544 57999999999999999999997653
No 431
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.80 E-value=5.9e-19 Score=180.27 Aligned_cols=137 Identities=21% Similarity=0.235 Sum_probs=109.6
Q ss_pred CCeEeecCCeeEEEEEeCCCCEEEEEEecCCCc----------------------------hhhHHHHHHHhhccCCCce
Q 001873 771 ANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDE----------------------------SGAFSSEIQTLGSIRHKNI 822 (1001)
Q Consensus 771 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~----------------------------~~~~~~Ei~~l~~l~h~nI 822 (1001)
.+.||+|+||+||+|+..+|+.||||++..... ...+.+|++.+.++.|++|
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 468999999999999987899999998864321 0123578999999999987
Q ss_pred eeEEeeeecCCceEEEEEccCCCCHHHH-hhcCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEEeCCCCCCeEECC
Q 001873 823 VRLLGWGSNKNLKLLFYDYLPNGSLSSL-LHGAGKGGADWEARYEVVLGVAHALAYLHH-DCMPPILHGDVKAMNVLLGP 900 (1001)
Q Consensus 823 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~-~~~~~ivH~Dlkp~NIll~~ 900 (1001)
.....+.... .++||||++|+++... +.+ ...+.....+++.|++.++.|+|+ . +|+||||||+||+++
T Consensus 82 ~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~---~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~- 152 (190)
T cd05145 82 PVPEPILLKK--NVLVMEFIGDDGSPAPRLKD---VPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH- 152 (190)
T ss_pred CCceEEEecC--CEEEEEEecCCCchhhhhhh---ccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE-
Confidence 5444443322 4899999998855443 432 346788889999999999999999 7 999999999999999
Q ss_pred CCcEEEeccccccccc
Q 001873 901 GYQAYLADFGLARIVS 916 (1001)
Q Consensus 901 ~~~~ki~Dfgla~~~~ 916 (1001)
++.++|+|||+|+.+.
T Consensus 153 ~~~~~liDFG~a~~~~ 168 (190)
T cd05145 153 DGKPYIIDVSQAVELD 168 (190)
T ss_pred CCCEEEEEcccceecC
Confidence 8899999999998653
No 432
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.77 E-value=4.5e-20 Score=170.90 Aligned_cols=164 Identities=27% Similarity=0.518 Sum_probs=127.2
Q ss_pred ccCCCCcEEeccCCcccCCCCcccCCccccccccccCCccCCCCChhhhcccccceEEccCCcccCCCCccccCCccccc
Q 001873 99 QPLKSLKRLIISSCNLTGTIPKEFGDYRELTFIDLSGNSLWGEIPTEVCRLRKLESLYLNTNLLEGEIPSDIGNLSSLAY 178 (1001)
Q Consensus 99 ~~l~~L~~L~l~~~~l~g~~p~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~L~~n~l~~~ip~~l~~L~~L~~ 178 (1001)
-.++..+.|.|+.|.++ .+|+.++.|.+|+.|++++|++. ++|.++++|++|+.|+++-|++. .+|..||.++.|+.
T Consensus 30 f~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~lev 106 (264)
T KOG0617|consen 30 FNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEV 106 (264)
T ss_pred cchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhh
Confidence 34567778888888888 78888888889999999988888 88888888888999998888888 78888888888888
Q ss_pred eecccccccc-ccCCCccchhhhhhhhhccCcCCCCCCCcccccCccchhccccccccccccCCccccccccceeccccc
Q 001873 179 LTLYDNQLSG-KIPKSIGALSKLQVFRAGGNQNLKGELPWEIGNCSNLVMLGLAETSISGNVPSSIGMLERIQTIAIYTS 257 (1001)
Q Consensus 179 L~L~~n~l~g-~~p~~~~~l~~L~~L~l~~n~~l~~~lp~~l~~l~~L~~L~l~~~~l~~~~p~~i~~l~~L~~L~l~~n 257 (1001)
|||++|++.. .+|..|..++.|+.|+++.| .+. .+|..++++++|+.|.+.+|.+.
T Consensus 107 ldltynnl~e~~lpgnff~m~tlralyl~dn-dfe-~lp~dvg~lt~lqil~lrdndll--------------------- 163 (264)
T KOG0617|consen 107 LDLTYNNLNENSLPGNFFYMTTLRALYLGDN-DFE-ILPPDVGKLTNLQILSLRDNDLL--------------------- 163 (264)
T ss_pred hhccccccccccCCcchhHHHHHHHHHhcCC-Ccc-cCChhhhhhcceeEEeeccCchh---------------------
Confidence 8888888774 47888888888888888888 443 66777777777777777666554
Q ss_pred cccccCcccccCCCCCceEeeecCcccCCCCcccCC
Q 001873 258 LLSGPIPEEIGNCSELQNLYLYQNSISGPIPGRIGA 293 (1001)
Q Consensus 258 ~l~g~ip~~l~~l~~L~~L~L~~N~i~~~~p~~~~~ 293 (1001)
.+|.+++.+++|++|++++|+++ .+|..+++
T Consensus 164 ----~lpkeig~lt~lrelhiqgnrl~-vlppel~~ 194 (264)
T KOG0617|consen 164 ----SLPKEIGDLTRLRELHIQGNRLT-VLPPELAN 194 (264)
T ss_pred ----hCcHHHHHHHHHHHHhcccceee-ecChhhhh
Confidence 46666666666777777777766 45544444
No 433
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.77 E-value=1.1e-18 Score=176.62 Aligned_cols=108 Identities=31% Similarity=0.287 Sum_probs=94.9
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCC
Q 001873 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCS 924 (1001)
Q Consensus 845 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~ 924 (1001)
|+|.+++++. ...+++..++.++.|++.|++|||++ + ||+||+++.++.+|+ ||.++.....
T Consensus 1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~------ 62 (176)
T smart00750 1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPE------ 62 (176)
T ss_pred CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeeccc------
Confidence 7899999864 34589999999999999999999997 5 999999999999999 9998865321
Q ss_pred CCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 001873 925 KTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTL 976 (1001)
Q Consensus 925 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~ 976 (1001)
...||+.|||||++.+..++.++|||||||++|||+||+.||....
T Consensus 63 ------~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~ 108 (176)
T smart00750 63 ------QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEER 108 (176)
T ss_pred ------cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccc
Confidence 1158899999999999999999999999999999999999997654
No 434
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.74 E-value=1.3e-19 Score=167.85 Aligned_cols=181 Identities=28% Similarity=0.444 Sum_probs=148.1
Q ss_pred cCCccccccccccCCccCCCCChhhhcccccceEEccCCcccCCCCccccCCccccceeccccccccccCCCccchhhhh
Q 001873 122 FGDYRELTFIDLSGNSLWGEIPTEVCRLRKLESLYLNTNLLEGEIPSDIGNLSSLAYLTLYDNQLSGKIPKSIGALSKLQ 201 (1001)
Q Consensus 122 ~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~L~~n~l~~~ip~~l~~L~~L~~L~L~~n~l~g~~p~~~~~l~~L~ 201 (1001)
+.++++.+.|.||+|+++ .+|+.|..|.+|+.|++++|+++ ++|.+++.|++|+.|++.-|++. ..|..||.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 456778899999999999 88999999999999999999999 89999999999999999999998 8899999999999
Q ss_pred hhhhccCcCCCCCCCcccccCccchhccccccccccccCCccccccccceeccccccccccCcccccCCCCCceEeeecC
Q 001873 202 VFRAGGNQNLKGELPWEIGNCSNLVMLGLAETSISGNVPSSIGMLERIQTIAIYTSLLSGPIPEEIGNCSELQNLYLYQN 281 (1001)
Q Consensus 202 ~L~l~~n~~l~~~lp~~l~~l~~L~~L~l~~~~l~~~~p~~i~~l~~L~~L~l~~n~l~g~ip~~l~~l~~L~~L~L~~N 281 (1001)
.||+.+|+.-...+|..+.-++.|+-|++++ |.+. .+|..++++++|+.|.+.+|
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~d------------------------ndfe-~lp~dvg~lt~lqil~lrdn 160 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGD------------------------NDFE-ILPPDVGKLTNLQILSLRDN 160 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcC------------------------CCcc-cCChhhhhhcceeEEeeccC
Confidence 9999998433344555555555555555555 4444 78999999999999999999
Q ss_pred cccCCCCcccCCCCCCcEEEcCCCcccccCCCCccCCC---CCCEEeccCCCCC
Q 001873 282 SISGPIPGRIGALSKLKSLLLWQNSLVGAIPDELGSCT---ELTVVDFSDNLLT 332 (1001)
Q Consensus 282 ~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~---~L~~L~Ls~N~l~ 332 (1001)
.+- .+|..++.+++|+.|.+.+|+++ .+|.+++++. +=+++.+.+|...
T Consensus 161 dll-~lpkeig~lt~lrelhiqgnrl~-vlppel~~l~l~~~k~v~r~E~NPwv 212 (264)
T KOG0617|consen 161 DLL-SLPKEIGDLTRLRELHIQGNRLT-VLPPELANLDLVGNKQVMRMEENPWV 212 (264)
T ss_pred chh-hCcHHHHHHHHHHHHhcccceee-ecChhhhhhhhhhhHHHHhhhhCCCC
Confidence 987 78999999999999999999999 7787777643 2233444455443
No 435
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.74 E-value=1e-18 Score=205.76 Aligned_cols=203 Identities=22% Similarity=0.295 Sum_probs=160.0
Q ss_pred cCCCeEeecCCeeEEEEEeC-CCCEEEEEEec----CCCch----hhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 769 TSANVIGTGSSGVVYRVTIP-NGETLAVKKMW----SSDES----GAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 769 ~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~----~~~~~----~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
...+++|.|++|.|+.+... ..+..+.|.+. ..... ..+..|+.+-..++|||++.......+.....-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 34678999999988876643 34445555432 21111 12556888888899999988877666665555569
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
|||++ +|..++... ..+...++..++.|+..|++|+|+. ||.|||+|++|+++..+|.+||+|||.+....-+.
T Consensus 401 E~~~~-Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~ 474 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRYPW 474 (601)
T ss_pred hcccH-HHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeeccCc
Confidence 99999 999999864 3477788888999999999999998 99999999999999999999999999998764433
Q ss_pred CCCCCCCCCCCcccccccccCccccccCCCC-CccchHHHHHHHHHHHhCCCCCCCCCCCCc
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHASMQRIT-EKSDVYSFGVVLLEVLTGRHPLDPTLPGGA 980 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~SlG~il~elltg~~Pf~~~~~~~~ 980 (1001)
.. ........+|+..|+|||.+.+..|+ ...||||.|+++..|.+|+.||......++
T Consensus 475 e~---~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~ 533 (601)
T KOG0590|consen 475 EK---NIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDN 533 (601)
T ss_pred ch---hhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCcccccccccc
Confidence 22 12345567899999999999999987 568999999999999999999987765544
No 436
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.73 E-value=8.3e-20 Score=204.02 Aligned_cols=286 Identities=26% Similarity=0.324 Sum_probs=142.7
Q ss_pred EEeccCCCCC-CCCCcccccccCccEEEcccccccCc----CChhhccccccCEEeccCCcccCccCccccccCcccEEE
Q 001873 323 VVDFSDNLLT-GSIPRSFGNLLKLQELQLSVNQLSGT----IPIEIATCTALTHLEIDNNAISGEIPADIGNINGLTLFF 397 (1001)
Q Consensus 323 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 397 (1001)
.|+|+.+.++ +..+..|..+.+|+.|++++|.++.. ++..+...+++++|+++++.+.+ .+..+
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~-~~~~~---------- 70 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGR-IPRGL---------- 70 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCC-cchHH----------
Confidence 4667777776 33444556666777777777776432 34445556667777777666542 01100
Q ss_pred eecCccCCCCCcccccCcccceEeCcCccccCCCCcccccccc---cceEEccCCcCCC----CCCCCCCCC-CCcceEE
Q 001873 398 AWKNKLTGNIPESLSQCQELQALDFSYNNLSGPIPKEIFGLRN---LTKLLLLSNDLSG----FIPPDIGNC-TTLRRLR 469 (1001)
Q Consensus 398 l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~---L~~L~L~~N~l~~----~~p~~l~~l-~~L~~L~ 469 (1001)
..++..+..+++|+.|++++|.+.+..+..+..+.+ |++|++++|++++ .+...+..+ ++|++|+
T Consensus 71 -------~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~ 143 (319)
T cd00116 71 -------QSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLV 143 (319)
T ss_pred -------HHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEE
Confidence 112233444555666666666555444444443333 5555555555442 111122233 4555555
Q ss_pred ccccccccC----CCcccCCCCCcceeeccCcccccC----CcccccccccCceEEcccccCcccCCCCcccccccccCC
Q 001873 470 LNDNRLSGT----IPSEMGNLKHLNFVDMSENHLVGG----IPPSVVGCQSLEFLDLHSNGLTGSVPDTLPTSLQLVDLS 541 (1001)
Q Consensus 470 Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~Ls 541 (1001)
+++|.+++. ++..+..+++|++|++++|.+++. ++..+..+++|+.|++++|.+++....
T Consensus 144 L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~------------ 211 (319)
T cd00116 144 LGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGAS------------ 211 (319)
T ss_pred cCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHH------------
Confidence 555555421 222334444555555555555421 122223334455555555544321110
Q ss_pred CCcCCCCcccccccccccceeeccCccccccchhhhhc-----cccccEEecccccccCCCCCccccccchhhhhhcCCC
Q 001873 542 DNRLSGSLAHSIGSLTELSKLLLSKNQLSGRIPAEILS-----CRKLILLDIGNNRFSGEIPKELGQISSLEISLNLSSN 616 (1001)
Q Consensus 542 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~L~Ls~N 616 (1001)
.++..+..+++|+.|++++|++++.....+.. .++|+.|++++|.+++.-.
T Consensus 212 ------~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~------------------ 267 (319)
T cd00116 212 ------ALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGA------------------ 267 (319)
T ss_pred ------HHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHH------------------
Confidence 11223344556666666666665432322222 2456666666665541100
Q ss_pred cccccccccccccccccEEEecCCcCCCCh-----hhhhcc-cccceeEcccCCC
Q 001873 617 QFSGEIPSEFSGLTKLGILDLSHNKLSGDL-----DALASL-QNLVSLNVSFNDF 665 (1001)
Q Consensus 617 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-----~~~~~l-~~L~~L~ls~N~l 665 (1001)
..+.+.+..+++|+.+|+++|.++... .++... +.|+++|+.+|++
T Consensus 268 ---~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 268 ---KDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred ---HHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 112233445578888888888888642 233444 6788888888764
No 437
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.73 E-value=5.3e-18 Score=202.58 Aligned_cols=218 Identities=22% Similarity=0.248 Sum_probs=170.9
Q ss_pred hcccCCCeEeecCCeeEEEEEeCCCCEEEEEEecCCCchhhHHHHHHHhhccC---CCceeeEEeeeecCCceEEEEEcc
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIR---HKNIVRLLGWGSNKNLKLLFYDYL 842 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~Ei~~l~~l~---h~nIv~l~~~~~~~~~~~lv~e~~ 842 (1001)
..|.+.+.+|+|+||+||+|...+|+.||+|+-+... ..+|.--.+++.|++ -+.|..+.......+.-++|+||.
T Consensus 698 ~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~-~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~ 776 (974)
T KOG1166|consen 698 EKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPN-PWEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEYS 776 (974)
T ss_pred eeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCC-ceeeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeecc
Confidence 4677888999999999999998889999999865443 455555566677776 233444444444556668999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEEC-------CCCcEEEecccccccc
Q 001873 843 PNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLG-------PGYQAYLADFGLARIV 915 (1001)
Q Consensus 843 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~-------~~~~~ki~Dfgla~~~ 915 (1001)
++|+|.+++. ..+.+++.....++.|++..+++||.. +|||+||||+|+++. ....++|+|||.+-.+
T Consensus 777 ~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm 851 (974)
T KOG1166|consen 777 PYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDM 851 (974)
T ss_pred ccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEEEecccceee
Confidence 9999999998 356689999999999999999999998 999999999999994 2346899999999776
Q ss_pred cCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCC--CCCC-------CCCCcCcccch
Q 001873 916 SGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHP--LDPT-------LPGGAPLVQWT 986 (1001)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~P--f~~~-------~~~~~~l~~~~ 986 (1001)
.--.+ .......++|-.+-.+|+..++.+++..|.|.++.+++-|+.|+.. +++. ++.--..+-|.
T Consensus 852 ~lfp~-----~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q~~~g~~~~~~~~~~Ry~~~~~W~ 926 (974)
T KOG1166|consen 852 KLFPD-----GTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYMEVKNGSSWMVKTNFPRYWKRDMWN 926 (974)
T ss_pred eEcCC-----CcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHHhcCCcceeccccchhhhhHHHHH
Confidence 43322 2234456789999999999999999999999999999999998742 1111 23334567788
Q ss_pred hhhhcccc
Q 001873 987 PLMFLMLN 994 (1001)
Q Consensus 987 ~~~~~~~~ 994 (1001)
+++..+++
T Consensus 927 ~~F~~lLN 934 (974)
T KOG1166|consen 927 KFFDLLLN 934 (974)
T ss_pred HHHHHHhC
Confidence 88877776
No 438
>PRK10345 hypothetical protein; Provisional
Probab=99.73 E-value=3.1e-17 Score=167.96 Aligned_cols=136 Identities=17% Similarity=0.267 Sum_probs=104.8
Q ss_pred ccCCCeEeecCCeeEEEEEeCCCCEEEEEEecCC--CchhhHHHHHHHhhcc-----CCCceeeEEeeeecCC---ceE-
Q 001873 768 LTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSS--DESGAFSSEIQTLGSI-----RHKNIVRLLGWGSNKN---LKL- 836 (1001)
Q Consensus 768 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~Ei~~l~~l-----~h~nIv~l~~~~~~~~---~~~- 836 (1001)
+...+.||+|+||.||. +++....+||++... ...+.+.+|+.+++.+ .||||++++|++..+. ..+
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 34467899999999996 544344479987543 2346799999999999 5799999999988763 433
Q ss_pred EEEEc--cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHH-HHHhhCCCCCeEEeCCCCCCeEECC----CCcEEEec-
Q 001873 837 LFYDY--LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHAL-AYLHHDCMPPILHGDVKAMNVLLGP----GYQAYLAD- 908 (1001)
Q Consensus 837 lv~e~--~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l-~yLH~~~~~~ivH~Dlkp~NIll~~----~~~~ki~D- 908 (1001)
+|+|| +++|+|.+++++. .+++. ..++.|++.++ +|||++ +|+||||||+||+++. +++++|+|
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred EEecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 78999 6679999999753 24444 34577878777 999999 9999999999999974 34899999
Q ss_pred ccccc
Q 001873 909 FGLAR 913 (1001)
Q Consensus 909 fgla~ 913 (1001)
||...
T Consensus 154 ~G~~~ 158 (210)
T PRK10345 154 IGEST 158 (210)
T ss_pred CCCcc
Confidence 55443
No 439
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.72 E-value=1e-19 Score=203.18 Aligned_cols=240 Identities=24% Similarity=0.271 Sum_probs=103.6
Q ss_pred ccccCCCCCceEeeecCcccCC----CCcccCCCCCCcEEEcCCCcccc------cCCCCccCCCCCCEEeccCCCCCCC
Q 001873 265 EEIGNCSELQNLYLYQNSISGP----IPGRIGALSKLKSLLLWQNSLVG------AIPDELGSCTELTVVDFSDNLLTGS 334 (1001)
Q Consensus 265 ~~l~~l~~L~~L~L~~N~i~~~----~p~~~~~l~~L~~L~L~~N~l~~------~~p~~l~~l~~L~~L~Ls~N~l~~~ 334 (1001)
..+..+++|++|+++++.++.. ++..+...++|++|+++++.+.+ .++..+..+++|+.|++++|.+.+.
T Consensus 17 ~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~ 96 (319)
T cd00116 17 ELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPD 96 (319)
T ss_pred HHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChh
Confidence 3344444455555555554321 23333344445555555554431 1223344455555555555555543
Q ss_pred CCcccccccC---ccEEEcccccccC----cCChhhccc-cccCEEeccCCcccCccCccccccCcccEEEeecCccCCC
Q 001873 335 IPRSFGNLLK---LQELQLSVNQLSG----TIPIEIATC-TALTHLEIDNNAISGEIPADIGNINGLTLFFAWKNKLTGN 406 (1001)
Q Consensus 335 ~p~~~~~l~~---L~~L~Ls~N~l~~----~~p~~~~~l-~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~ 406 (1001)
.+..+..+.+ |++|++++|++++ .+...+..+ ++|+.|++++|.+++.... .
T Consensus 97 ~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~--------------------~ 156 (319)
T cd00116 97 GCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCE--------------------A 156 (319)
T ss_pred HHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHH--------------------H
Confidence 4444433333 5555555555542 112223333 4555555555555422111 0
Q ss_pred CCcccccCcccceEeCcCccccCC----CCcccccccccceEEccCCcCCCC----CCCCCCCCCCcceEEccccccccC
Q 001873 407 IPESLSQCQELQALDFSYNNLSGP----IPKEIFGLRNLTKLLLLSNDLSGF----IPPDIGNCTTLRRLRLNDNRLSGT 478 (1001)
Q Consensus 407 ~p~~l~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~ 478 (1001)
++..+..+++|++|++++|.+++. ++..+..+++|++|++++|.+++. ++..+..+++|++|++++|.+++.
T Consensus 157 ~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~ 236 (319)
T cd00116 157 LAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDA 236 (319)
T ss_pred HHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchH
Confidence 111223333444444444444321 111222223444444444444321 122233445555555555555432
Q ss_pred CCcccC-----CCCCcceeeccCccccc----CCcccccccccCceEEcccccCc
Q 001873 479 IPSEMG-----NLKHLNFVDMSENHLVG----GIPPSVVGCQSLEFLDLHSNGLT 524 (1001)
Q Consensus 479 ~p~~~~-----~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~ 524 (1001)
....+. ..+.|+.|++++|.+++ .+...+..+++|+++++++|.++
T Consensus 237 ~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~ 291 (319)
T cd00116 237 GAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFG 291 (319)
T ss_pred HHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCc
Confidence 111111 12456666666665541 12233344456666666666665
No 440
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.71 E-value=1.5e-18 Score=193.29 Aligned_cols=184 Identities=29% Similarity=0.293 Sum_probs=154.2
Q ss_pred eEeecCCeeEEEEE----eCCCCEEEEEEecCCCch----hhHHHHHHHhhccC-CCceeeEEeeeecCCceEEEEEccC
Q 001873 773 VIGTGSSGVVYRVT----IPNGETLAVKKMWSSDES----GAFSSEIQTLGSIR-HKNIVRLLGWGSNKNLKLLFYDYLP 843 (1001)
Q Consensus 773 ~lG~G~fg~Vy~~~----~~~~~~vavK~~~~~~~~----~~~~~Ei~~l~~l~-h~nIv~l~~~~~~~~~~~lv~e~~~ 843 (1001)
++|+|+||.|+.++ ...++-+|+|..+..... .....|-.++..++ ||.+|++...+..+...+++++|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 36999999999754 335778888877543321 23445777888886 9999999999999999999999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCC
Q 001873 844 NGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNC 923 (1001)
Q Consensus 844 ~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~ 923 (1001)
||++...+.+. ..+++.....+...++-+++++|+. +|+|||+|++||+++.+|++|+.|||.++......
T Consensus 81 gg~lft~l~~~--~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~---- 151 (612)
T KOG0603|consen 81 GGDLFTRLSKE--VMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK---- 151 (612)
T ss_pred cchhhhccccC--CchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhh----
Confidence 99999988763 3467777777788999999999998 99999999999999999999999999998764221
Q ss_pred CCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCC
Q 001873 924 SKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDP 974 (1001)
Q Consensus 924 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~ 974 (1001)
..+||..|||||++. ....++|.||||++++||+||..||.+
T Consensus 152 -------~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 152 -------IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred -------hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 118999999999998 667889999999999999999999998
No 441
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.71 E-value=3.1e-17 Score=173.07 Aligned_cols=203 Identities=23% Similarity=0.350 Sum_probs=132.9
Q ss_pred cccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCc-----hhhHHHHHHHhhccCC----------Cce------ee
Q 001873 767 NLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDE-----SGAFSSEIQTLGSIRH----------KNI------VR 824 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~Ei~~l~~l~h----------~nI------v~ 824 (1001)
.+...+.||.|+++.||.+++. +++++|||.+....+ .+++.+|......+.+ -.+ ++
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 3455678999999999999976 589999998854332 2566677665555322 111 22
Q ss_pred EEe---eeecC---C-----ceEEEEEccCCCCHHHHhhc---CCCC--CCCHHHHHHHHHHHHHHHHHHhhCCCCCeEE
Q 001873 825 LLG---WGSNK---N-----LKLLFYDYLPNGSLSSLLHG---AGKG--GADWEARYEVVLGVAHALAYLHHDCMPPILH 888 (1001)
Q Consensus 825 l~~---~~~~~---~-----~~~lv~e~~~~gsL~~~l~~---~~~~--~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH 888 (1001)
+-+ +.... . ..+++|+-+. ++|.+++.. .... ......+..+..|+++.+++||+. |+||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVH 168 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVH 168 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEE
T ss_pred EcCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEe
Confidence 111 11111 1 2267788775 788887642 1111 123445567779999999999999 9999
Q ss_pred eCCCCCCeEECCCCcEEEecccccccccCCCCCCCCCCCCCCcccccccccCcccccc--------CCCCCccchHHHHH
Q 001873 889 GDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM--------QRITEKSDVYSFGV 960 (1001)
Q Consensus 889 ~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Dv~SlG~ 960 (1001)
+||||+|++++++|.++++||+........ .. ....+..|.+||.... ..++.+.|.|++|+
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~~---------~~-~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~ 238 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAGTR---------YR-CSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGI 238 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETTEE---------EE-GGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHH
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecCce---------ee-ccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHH
Confidence 999999999999999999999987653211 00 0234577999997643 35788999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCcCcc
Q 001873 961 VLLEVLTGRHPLDPTLPGGAPLV 983 (1001)
Q Consensus 961 il~elltg~~Pf~~~~~~~~~l~ 983 (1001)
++|.|++|+.||+...++...-.
T Consensus 239 ~ly~lWC~~lPf~~~~~~~~~~~ 261 (288)
T PF14531_consen 239 TLYSLWCGRLPFGLSSPEADPEW 261 (288)
T ss_dssp HHHHHHHSS-STCCCGGGSTSGG
T ss_pred HHHHHHHccCCCCCCCccccccc
Confidence 99999999999998765554433
No 442
>smart00090 RIO RIO-like kinase.
Probab=99.70 E-value=7.1e-17 Score=169.75 Aligned_cols=139 Identities=17% Similarity=0.240 Sum_probs=109.9
Q ss_pred cccCCCeEeecCCeeEEEEE--eCCCCEEEEEEecCCCc--------------------------hhhHHHHHHHhhccC
Q 001873 767 NLTSANVIGTGSSGVVYRVT--IPNGETLAVKKMWSSDE--------------------------SGAFSSEIQTLGSIR 818 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~--~~~~~~vavK~~~~~~~--------------------------~~~~~~Ei~~l~~l~ 818 (1001)
-|++.+.||+|+||.||+|. ..+|++||||++..... ...+.+|++.++++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 37788999999999999998 56899999998864321 012567999999997
Q ss_pred CC--ceeeEEeeeecCCceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC-eEEeCCCCCC
Q 001873 819 HK--NIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPP-ILHGDVKAMN 895 (1001)
Q Consensus 819 h~--nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~-ivH~Dlkp~N 895 (1001)
+. .+.+++++ ...++||||++|+++..+... .......+...++.|++.++.|+|+. + |+||||||+|
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp~N 179 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLK--DVEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSEYN 179 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCcccccccc--cCCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCChhh
Confidence 53 34455543 234899999999888776532 22345566778999999999999998 8 9999999999
Q ss_pred eEECCCCcEEEecccccccc
Q 001873 896 VLLGPGYQAYLADFGLARIV 915 (1001)
Q Consensus 896 Ill~~~~~~ki~Dfgla~~~ 915 (1001)
|+++ ++.++++|||.|...
T Consensus 180 Ili~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 180 ILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred EEEE-CCCEEEEEChhhhcc
Confidence 9999 889999999998754
No 443
>PLN03150 hypothetical protein; Provisional
Probab=99.68 E-value=7.9e-17 Score=193.08 Aligned_cols=152 Identities=36% Similarity=0.548 Sum_probs=99.3
Q ss_pred CcHHHHHHHHHHHHhCCCCCCccCCCCCCCCCCC----ccceEEeCC---CC--cEEEEEeccccccccCCcccccCCCC
Q 001873 34 ALDEQGQALLTWKNSLNSSTDALSSWNPAETSPC----KWFGIHCSS---NG--EVVEISLKAVDLQGSLPSIFQPLKSL 104 (1001)
Q Consensus 34 ~~~~~~~aLl~~k~~~~~~~~~l~sW~~~~~~~c----~w~gv~c~~---~~--~v~~l~l~~~~l~~~~~~~~~~l~~L 104 (1001)
+.++|.+||+++|+++.++.. .+|+. ..|| .|.||+|+. .+ +|+.
T Consensus 369 t~~~~~~aL~~~k~~~~~~~~--~~W~g--~~C~p~~~~w~Gv~C~~~~~~~~~~v~~---------------------- 422 (623)
T PLN03150 369 TLLEEVSALQTLKSSLGLPLR--FGWNG--DPCVPQQHPWSGADCQFDSTKGKWFIDG---------------------- 422 (623)
T ss_pred cCchHHHHHHHHHHhcCCccc--CCCCC--CCCCCcccccccceeeccCCCCceEEEE----------------------
Confidence 456799999999999976542 48973 3332 799999962 12 3444
Q ss_pred cEEeccCCcccCCCCcccCCccccccccccCCccCCCCChhhhcccccceEEccCCcccCCCCccccCCccccceecccc
Q 001873 105 KRLIISSCNLTGTIPKEFGDYRELTFIDLSGNSLWGEIPTEVCRLRKLESLYLNTNLLEGEIPSDIGNLSSLAYLTLYDN 184 (1001)
Q Consensus 105 ~~L~l~~~~l~g~~p~~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~L~~n~l~~~ip~~l~~L~~L~~L~L~~n 184 (1001)
|+|++|+++|.+|+.++.+++|+.|+|++|++.|.+|..++.+++|++|+|++|+++|.+|+.+++|++|++|+|++|
T Consensus 423 --L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N 500 (623)
T PLN03150 423 --LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGN 500 (623)
T ss_pred --EECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCC
Confidence 555566666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred ccccccCCCccch-hhhhhhhhccCcCCCC
Q 001873 185 QLSGKIPKSIGAL-SKLQVFRAGGNQNLKG 213 (1001)
Q Consensus 185 ~l~g~~p~~~~~l-~~L~~L~l~~n~~l~~ 213 (1001)
.++|.+|..++.+ .++..+++++|..++|
T Consensus 501 ~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~ 530 (623)
T PLN03150 501 SLSGRVPAALGGRLLHRASFNFTDNAGLCG 530 (623)
T ss_pred cccccCChHHhhccccCceEEecCCccccC
Confidence 6666666666543 3455566666654443
No 444
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.67 E-value=2.9e-16 Score=163.97 Aligned_cols=132 Identities=21% Similarity=0.344 Sum_probs=112.7
Q ss_pred CeEeecCCeeEEEEEeCCCCEEEEEEecCCCc----------hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 772 NVIGTGSSGVVYRVTIPNGETLAVKKMWSSDE----------SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~----------~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
+.||+|++|.||+|.. .+..|+||+...... ...+.+|+.++..++|++|+....++.+....++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999987 678899998653221 13577899999999999988777777677778999999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEeccccccc
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARI 914 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~ 914 (1001)
++|++|.+++.... . .+..++.+++.++.++|+. +++|||++|+||+++ ++.++++|||.+..
T Consensus 81 ~~G~~L~~~~~~~~-----~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG-----M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc-----H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999986431 2 7788999999999999998 999999999999999 78999999999875
No 445
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.67 E-value=3.8e-16 Score=185.56 Aligned_cols=135 Identities=21% Similarity=0.340 Sum_probs=111.0
Q ss_pred hcccCCCeEeecCCeeEEEEEeCCCCEEEEEEe-cCC-C--------chhhHHHHHHHhhccCCCceeeEEeeeecCCce
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIPNGETLAVKKM-WSS-D--------ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLK 835 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~-~~~-~--------~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~ 835 (1001)
..|...+.||+|+||+||+|.+... .+++|+. ... . ..+++.+|++++++++|++|+....++......
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK 411 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence 4456788999999999999987543 4444432 111 0 124578999999999999998888777777778
Q ss_pred EEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccc
Q 001873 836 LLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIV 915 (1001)
Q Consensus 836 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~ 915 (1001)
++||||+++++|.+++. ...+++.++++++.|+|+. +++|||+||+||++ .++.++|+|||+++..
T Consensus 412 ~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 412 TIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred EEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 99999999999999885 3467899999999999998 99999999999999 6789999999999864
No 446
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.67 E-value=3.2e-16 Score=161.60 Aligned_cols=133 Identities=21% Similarity=0.304 Sum_probs=107.2
Q ss_pred ccCCCeEeecCCeeEEEEEeCCCCEEEEEEecCCCc------------------------hhhHHHHHHHhhccCCC--c
Q 001873 768 LTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDE------------------------SGAFSSEIQTLGSIRHK--N 821 (1001)
Q Consensus 768 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~------------------------~~~~~~Ei~~l~~l~h~--n 821 (1001)
|.+.+.||+|+||.||++..++|+.||||++..... .....+|+.++..+.|+ .
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 96 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP 96 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 677889999999999999988899999998653220 01356788899988777 4
Q ss_pred eeeEEeeeecCCceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCC
Q 001873 822 IVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPG 901 (1001)
Q Consensus 822 Iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~ 901 (1001)
+++.++. ...++||||++|++|.+.... .....++.+++.++.++|+. +|+||||||+||+++++
T Consensus 97 v~~~~~~----~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p~Nill~~~ 161 (198)
T cd05144 97 VPKPIDW----NRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKH---GIIHGDLSEFNILVDDD 161 (198)
T ss_pred CCceeec----CCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHC---CCCcCCCCcccEEEcCC
Confidence 4444442 345899999999998776431 23456888999999999998 99999999999999999
Q ss_pred CcEEEecccccccc
Q 001873 902 YQAYLADFGLARIV 915 (1001)
Q Consensus 902 ~~~ki~Dfgla~~~ 915 (1001)
+.++|+|||.+...
T Consensus 162 ~~~~liDfg~~~~~ 175 (198)
T cd05144 162 EKIYIIDWPQMVST 175 (198)
T ss_pred CcEEEEECCccccC
Confidence 99999999998654
No 447
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.66 E-value=2.9e-16 Score=162.33 Aligned_cols=129 Identities=20% Similarity=0.394 Sum_probs=105.7
Q ss_pred eEeecCCeeEEEEEeCCCCEEEEEEecCCC----c------hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEcc
Q 001873 773 VIGTGSSGVVYRVTIPNGETLAVKKMWSSD----E------SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYL 842 (1001)
Q Consensus 773 ~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~----~------~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~ 842 (1001)
.||+|+||.||+|.+ ++.+|++|+..... + ..++.+|+++++.++|+++.....++......++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 379999999999986 57899999864321 1 145678999999999887655555555566678999999
Q ss_pred CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccc
Q 001873 843 PNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIV 915 (1001)
Q Consensus 843 ~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~ 915 (1001)
+|++|.+++..... .++.+++.++.++|+. +++|||++|+||+++ ++.++++|||++...
T Consensus 80 ~g~~l~~~~~~~~~---------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 80 EGKPLKDVIEEGND---------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred CCccHHHHHhhcHH---------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 99999998764211 7889999999999998 999999999999999 789999999998763
No 448
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.65 E-value=3.4e-17 Score=190.85 Aligned_cols=199 Identities=20% Similarity=0.205 Sum_probs=148.2
Q ss_pred cccCCCeEeecCCeeEEEEEeCCCCEEEEEEecCCCch---hhHHH---HHHHhhccCCCceeeEEeeeecCCceEEEEE
Q 001873 767 NLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDES---GAFSS---EIQTLGSIRHKNIVRLLGWGSNKNLKLLFYD 840 (1001)
Q Consensus 767 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~---Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e 840 (1001)
++...+.+|++.|=+|.+++++.|. |+||++...... +.|.+ |++ ...++|||.+++.-+-..++.-|+|-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 5666788999999999999998777 999988655422 34444 444 555689999999888777777788989
Q ss_pred ccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccC-CC
Q 001873 841 YLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSG-SG 919 (1001)
Q Consensus 841 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~-~~ 919 (1001)
|.. -+|+|.+.- +..+...+.+.|+.|++.|+..+|.. +|+|||||.+|||++.-+=+.|+||..-+...- .+
T Consensus 102 yvk-hnLyDRlST--RPFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeD 175 (1431)
T KOG1240|consen 102 YVK-HNLYDRLST--RPFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPED 175 (1431)
T ss_pred HHh-hhhhhhhcc--chHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCCCC
Confidence 884 699999874 33457777888999999999999998 999999999999999988899999986543211 11
Q ss_pred CCCCCCCCCCCcccccccccCccccccC----------C-CCCccchHHHHHHHHHHHh-CCCCCCC
Q 001873 920 DDNCSKTNQRPQLAGSYGYMAPEHASMQ----------R-ITEKSDVYSFGVVLLEVLT-GRHPLDP 974 (1001)
Q Consensus 920 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------~-~~~~~Dv~SlG~il~ellt-g~~Pf~~ 974 (1001)
++.....-..+ ...-.-|.|||.+... . .+++.||||+||++.|+++ |++||+-
T Consensus 176 NPadf~fFFDT-SrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L 241 (1431)
T KOG1240|consen 176 NPADFTFFFDT-SRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL 241 (1431)
T ss_pred CcccceEEEec-CCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH
Confidence 11000000000 1112359999976431 2 4578899999999999998 7999863
No 449
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.64 E-value=4.9e-16 Score=162.41 Aligned_cols=149 Identities=24% Similarity=0.293 Sum_probs=110.1
Q ss_pred CCCceeeEEeeeec---------------------------CCceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHH
Q 001873 818 RHKNIVRLLGWGSN---------------------------KNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLG 870 (1001)
Q Consensus 818 ~h~nIv~l~~~~~~---------------------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ 870 (1001)
+|||||+++++|.+ ....|+||..++ .+|..|+.. ...+.....-|..|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~---~~~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWT---RHRSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhc---CCCchHHHHHHHHH
Confidence 69999999886532 235588888886 589999974 33566777778999
Q ss_pred HHHHHHHHhhCCCCCeEEeCCCCCCeEEC--CCC--cEEEecccccccccCCCCCCCCCCCCCCcccccccccCcccccc
Q 001873 871 VAHALAYLHHDCMPPILHGDVKAMNVLLG--PGY--QAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASM 946 (1001)
Q Consensus 871 i~~~l~yLH~~~~~~ivH~Dlkp~NIll~--~~~--~~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 946 (1001)
++.|+.|||++ ||.|||+|++||++. +|+ .+.|+|||++---...+-... -....-...|...-||||+...
T Consensus 350 lLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlp-y~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 350 LLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLP-YESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccc-cccccccCCCcceecchhhhhc
Confidence 99999999998 999999999999994 444 578999998753222111100 0011122347778899998754
Q ss_pred CC------CCCccchHHHHHHHHHHHhCCCCCCC
Q 001873 947 QR------ITEKSDVYSFGVVLLEVLTGRHPLDP 974 (1001)
Q Consensus 947 ~~------~~~~~Dv~SlG~il~elltg~~Pf~~ 974 (1001)
.+ -..|+|.|+.|.+.||+++...||..
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~ 459 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYK 459 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccc
Confidence 22 12589999999999999999999987
No 450
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.62 E-value=2e-16 Score=184.59 Aligned_cols=174 Identities=26% Similarity=0.356 Sum_probs=124.4
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCCCchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCC
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPN 844 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~ 844 (1001)
..|..++.|..|+||.||.++++ ..+++|+|.- +... +.+- ++.....|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~kiN-kq~l---ilRn--ilt~a~npfvv--------------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKIN-KQNL---ILRN--ILTFAGNPFVV--------------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhccc-ccch---hhhc--cccccCCccee---------------------
Confidence 45788899999999999999886 4788888442 2211 1110 22222333333
Q ss_pred CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCC----
Q 001873 845 GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGD---- 920 (1001)
Q Consensus 845 gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~---- 920 (1001)
|+=...++..+. ++. +++.+++|+|+- +|+|||+||+|.+|+.-|++|++|||+++..--...
T Consensus 136 gDc~tllk~~g~--lPv--------dmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~ 202 (1205)
T KOG0606|consen 136 GDCATLLKNIGP--LPV--------DMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLK 202 (1205)
T ss_pred chhhhhcccCCC--Ccc--------hhhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhhccchhh
Confidence 444444443322 221 227789999998 999999999999999999999999999864311100
Q ss_pred ----CCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCC
Q 001873 921 ----DNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGG 979 (1001)
Q Consensus 921 ----~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~~~~~ 979 (1001)
......-....++|||.|.|||++....|+..+|-|++|+|+||.+-|..||.++++++
T Consensus 203 eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpee 265 (1205)
T KOG0606|consen 203 EGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE 265 (1205)
T ss_pred hcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHH
Confidence 01111112345689999999999999999999999999999999999999999997663
No 451
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.57 E-value=1.6e-14 Score=141.93 Aligned_cols=135 Identities=20% Similarity=0.289 Sum_probs=114.4
Q ss_pred CCCeEeecCCeeEEEEEeCCCCEEEEEEecCCCchhhHHHHHHHhhccCC--CceeeEEeeeecCCceEEEEEccCCCCH
Q 001873 770 SANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRH--KNIVRLLGWGSNKNLKLLFYDYLPNGSL 847 (1001)
Q Consensus 770 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~Ei~~l~~l~h--~nIv~l~~~~~~~~~~~lv~e~~~~gsL 847 (1001)
+.+.+|+|.++.||+++..+ ..+++|..........+.+|+..++.++| ..+++++++....+..+++|||++++.+
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~ 80 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETL 80 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeec
Confidence 35679999999999999854 88999998655444678999999999976 5899999988888889999999998777
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEeccccccc
Q 001873 848 SSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARI 914 (1001)
Q Consensus 848 ~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~ 914 (1001)
..+ +......++.+++++++++|....++++|+|++|+||++++.+.++++|||.++.
T Consensus 81 ~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 81 DEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 654 4456677889999999999986434799999999999999989999999998864
No 452
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.56 E-value=5.5e-16 Score=169.81 Aligned_cols=129 Identities=23% Similarity=0.372 Sum_probs=110.1
Q ss_pred CCceEEEEEccCCCCHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEeccc
Q 001873 832 KNLKLLFYDYLPNGSLSSLLHG-AGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFG 910 (1001)
Q Consensus 832 ~~~~~lv~e~~~~gsL~~~l~~-~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfg 910 (1001)
..+.+|.|++|...+|.+|+.. ......++.....++.|++.|++| + +.+|||+||.||+...+.++||.|||
T Consensus 328 ~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFg 401 (516)
T KOG1033|consen 328 KVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFG 401 (516)
T ss_pred ccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhh
Confidence 3467899999999999999974 334456888899999999999999 5 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHh
Q 001873 911 LARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLT 967 (1001)
Q Consensus 911 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt 967 (1001)
+.......... .......+..+||..||+||.+.+..|+.++||||+|++++|++.
T Consensus 402 l~ts~~~~~~~-~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 402 LVTSQDKDETV-APAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred heeecccCCcc-cchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 99876554421 123344566789999999999999999999999999999999988
No 453
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.55 E-value=2e-14 Score=146.96 Aligned_cols=133 Identities=21% Similarity=0.317 Sum_probs=96.9
Q ss_pred CCeEeecCCeeEEEEEeCCCCEEEEEEecCCCch----hhH----------------------HHHHHHhhccCCCc--e
Q 001873 771 ANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDES----GAF----------------------SSEIQTLGSIRHKN--I 822 (1001)
Q Consensus 771 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~----~~~----------------------~~Ei~~l~~l~h~n--I 822 (1001)
.+.||+|+||+||+|...++++||||++...... ... ..|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999999888999999987543211 111 34555666654432 4
Q ss_pred eeEEeeeecCCceEEEEEccCCCCHHH-HhhcCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEEeCCCCCCeEECC
Q 001873 823 VRLLGWGSNKNLKLLFYDYLPNGSLSS-LLHGAGKGGADWEARYEVVLGVAHALAYLHH-DCMPPILHGDVKAMNVLLGP 900 (1001)
Q Consensus 823 v~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~-~~~~~ivH~Dlkp~NIll~~ 900 (1001)
.+.+++ ...++||||++++.+.. .+.... .. ..+..++.+++.++.++|. . +|+||||||+||+++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~---~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili~- 149 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR---LL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILVD- 149 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh---hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEEE-
Confidence 444443 23589999999854321 121110 11 5567889999999999999 6 999999999999999
Q ss_pred CCcEEEecccccccc
Q 001873 901 GYQAYLADFGLARIV 915 (1001)
Q Consensus 901 ~~~~ki~Dfgla~~~ 915 (1001)
++.++++|||.|...
T Consensus 150 ~~~~~liDfg~a~~~ 164 (187)
T cd05119 150 DGKVYIIDVPQAVEI 164 (187)
T ss_pred CCcEEEEECcccccc
Confidence 899999999999764
No 454
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.53 E-value=7.1e-14 Score=147.41 Aligned_cols=133 Identities=22% Similarity=0.331 Sum_probs=104.3
Q ss_pred CCeEe-ecCCeeEEEEEeCCCCEEEEEEecCC---------------CchhhHHHHHHHhhccCCCce--eeEEeeeecC
Q 001873 771 ANVIG-TGSSGVVYRVTIPNGETLAVKKMWSS---------------DESGAFSSEIQTLGSIRHKNI--VRLLGWGSNK 832 (1001)
Q Consensus 771 ~~~lG-~G~fg~Vy~~~~~~~~~vavK~~~~~---------------~~~~~~~~Ei~~l~~l~h~nI--v~l~~~~~~~ 832 (1001)
..+|| .|+.|+||.++.. +..+|||++... .....+.+|++++.+++|++| ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 45688 8999999999884 788999977421 112467889999999998775 6667654332
Q ss_pred -Cc---eEEEEEccCC-CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEe
Q 001873 833 -NL---KLLFYDYLPN-GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLA 907 (1001)
Q Consensus 833 -~~---~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~ 907 (1001)
.. .++||||++| .+|.+++.+. .++.. .+.+++.++.++|+. ||+||||||+|||++.++.++|+
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~LI 184 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA---PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFWLI 184 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC---CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEEEE
Confidence 22 2599999997 6999988642 23433 356899999999998 99999999999999998999999
Q ss_pred ccccccc
Q 001873 908 DFGLARI 914 (1001)
Q Consensus 908 Dfgla~~ 914 (1001)
|||.++.
T Consensus 185 Dfg~~~~ 191 (239)
T PRK01723 185 DFDRGEL 191 (239)
T ss_pred ECCCccc
Confidence 9998875
No 455
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.52 E-value=2.9e-14 Score=160.05 Aligned_cols=158 Identities=26% Similarity=0.469 Sum_probs=128.0
Q ss_pred hhccCCCceeeEEeeeecCCceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCe-EEeCCC
Q 001873 814 LGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPI-LHGDVK 892 (1001)
Q Consensus 814 l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~i-vH~Dlk 892 (1001)
|+.+.|.|+.+++|.+.++...++|.+||..|+|.|.+... ...+++.=...++++|+.|+.|+|.. +| .|+.++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~-~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l~ 76 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE-DIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGALK 76 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc-ccCccHHHHHHHHHHHHHHHHHHhcC---cceeeeeec
Confidence 45789999999999999999999999999999999999863 44577777888899999999999997 55 999999
Q ss_pred CCCeEECCCCcEEEecccccccccCCCCCCCCCCCCCCcccccccccCccccccCC-------CCCccchHHHHHHHHHH
Q 001873 893 AMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQR-------ITEKSDVYSFGVVLLEV 965 (1001)
Q Consensus 893 p~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-------~~~~~Dv~SlG~il~el 965 (1001)
+.|.++|....+|++|||+........ .........-..-|.|||.+.... .+.+.||||||++++|+
T Consensus 77 s~nClvd~~w~lklt~~Gl~~~~~~~~-----~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei 151 (484)
T KOG1023|consen 77 SSNCLVDSRWVLKLTDFGLNSLLEETA-----EPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEI 151 (484)
T ss_pred cccceeeeeEEEEechhhhcccccccc-----cccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHH
Confidence 999999999999999999987764311 111111122345699999886631 45679999999999999
Q ss_pred HhCCCCCCCCCCCCc
Q 001873 966 LTGRHPLDPTLPGGA 980 (1001)
Q Consensus 966 ltg~~Pf~~~~~~~~ 980 (1001)
++++.||+......+
T Consensus 152 ~~r~~~~~~~~~~~~ 166 (484)
T KOG1023|consen 152 LFRSGPFDLRNLVED 166 (484)
T ss_pred HhccCccccccccCC
Confidence 999999997543333
No 456
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.44 E-value=1.7e-14 Score=170.32 Aligned_cols=216 Identities=26% Similarity=0.312 Sum_probs=170.6
Q ss_pred hcccCCCeEeecCCeeEEEEEeC--CCCEEEEEEecCCC----chhhHHHHHHHhhccC-CCceeeEEeeeecCCceEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP--NGETLAVKKMWSSD----ESGAFSSEIQTLGSIR-HKNIVRLLGWGSNKNLKLLF 838 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~~~~~~----~~~~~~~Ei~~l~~l~-h~nIv~l~~~~~~~~~~~lv 838 (1001)
..|...+.||+|+|+.|-..... ....+|+|.+.... .......|..+-+.+. |+|++.+++...+.+..+++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~ 99 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS 99 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence 35777788999999999887643 34556777664332 1234445777777776 99999999999999999999
Q ss_pred EEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHh-hCCCCCeEEeCCCCCCeEECCCC-cEEEeccccccccc
Q 001873 839 YDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLH-HDCMPPILHGDVKAMNVLLGPGY-QAYLADFGLARIVS 916 (1001)
Q Consensus 839 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH-~~~~~~ivH~Dlkp~NIll~~~~-~~ki~Dfgla~~~~ 916 (1001)
.+|.+++++.+.+........+...+..+..|+..++.|+| .. ++.|||+||+|.+++..+ ..|++|||+|..+.
T Consensus 100 ~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~ 176 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLATAYR 176 (601)
T ss_pred cCcccccccccccccCCccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhcccc
Confidence 99999999999984222224555666778999999999999 66 999999999999999999 99999999998875
Q ss_pred CCCCCCCCCCCCCCcccc-cccccCccccccC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcCcccchhh
Q 001873 917 GSGDDNCSKTNQRPQLAG-SYGYMAPEHASMQ-RITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAPLVQWTPL 988 (1001)
Q Consensus 917 ~~~~~~~~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~~Dv~SlG~il~elltg~~Pf~~~~~~~~~l~~~~~~ 988 (1001)
.-. .........+| ++.|+|||...+. ......|+||.|+++.-+++|..||+-..........|...
T Consensus 177 ~~~----g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~ 246 (601)
T KOG0590|consen 177 NKN----GAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSN 246 (601)
T ss_pred ccC----CcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeeccc
Confidence 411 12223344567 9999999998774 45688999999999999999999999877777777777665
No 457
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.44 E-value=7.1e-13 Score=152.06 Aligned_cols=148 Identities=17% Similarity=0.253 Sum_probs=104.2
Q ss_pred cHHHHHhcccCCCeEeecCCeeEEEEEeCCCCEEEEEEecCCCch-----------------------------------
Q 001873 760 SIDDVVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDES----------------------------------- 804 (1001)
Q Consensus 760 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~----------------------------------- 804 (1001)
+++++...|. .+.||+|++|.||+|+.++|+.||||+.+.....
T Consensus 112 ~~~~~F~~fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~ 190 (437)
T TIGR01982 112 PLEELFAEFE-EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEF 190 (437)
T ss_pred CHHHHHhhCC-CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHH
Confidence 4455555555 3679999999999999999999999987432100
Q ss_pred -------hhHHHHHHHhhccC-----CCceeeEEe-eeecCCceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHH
Q 001873 805 -------GAFSSEIQTLGSIR-----HKNIVRLLG-WGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGV 871 (1001)
Q Consensus 805 -------~~~~~Ei~~l~~l~-----h~nIv~l~~-~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i 871 (1001)
-+|.+|++.+.+++ +++| .+-. +.......++||||++|++|.++...... ..+ ..+++.++
T Consensus 191 ~~~l~~Eldf~~Ea~n~~~~~~~~~~~~~v-~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~-~~~---~~~ia~~~ 265 (437)
T TIGR01982 191 EKTLRRELDLRREAANASELGENFKNDPGV-YVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA-GLD---RKALAENL 265 (437)
T ss_pred HHHHHHHHCHHHHHHHHHHHHHhcCCCCCE-EeCCEehhhcCCceEEEEeECCcccccHHHHHhc-CCC---HHHHHHHH
Confidence 02445666555552 3333 2222 22334456999999999999888653211 122 34566666
Q ss_pred HH-HHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEeccccccccc
Q 001873 872 AH-ALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVS 916 (1001)
Q Consensus 872 ~~-~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~ 916 (1001)
+. .+..+|.. |++|+|+||.||+++++++++++|||++..+.
T Consensus 266 ~~~~l~ql~~~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 266 ARSFLNQVLRD---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred HHHHHHHHHhC---CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 65 46788987 99999999999999999999999999998764
No 458
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.43 E-value=1.4e-14 Score=158.34 Aligned_cols=175 Identities=35% Similarity=0.534 Sum_probs=92.7
Q ss_pred CccccccccccCCccCCCCChhhhcccccceEEccCCcccCCCCccccCCccccceeccccccccccCCCccchhhhhhh
Q 001873 124 DYRELTFIDLSGNSLWGEIPTEVCRLRKLESLYLNTNLLEGEIPSDIGNLSSLAYLTLYDNQLSGKIPKSIGALSKLQVF 203 (1001)
Q Consensus 124 ~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~L~~n~l~~~ip~~l~~L~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L 203 (1001)
.|+--...||+.|++. ++|.+++.+..|+.|.|..|.+. .||..+++|..|.+|||+.|+++ .+|..++.|+ |+.|
T Consensus 73 ~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvl 148 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVL 148 (722)
T ss_pred cccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeE
Confidence 3444455566666665 56666666666666666666665 56666666666666666666665 5566555554 5555
Q ss_pred hhccCcCCCCCCCcccccCccchhccccccccccccCCccccccccceeccccccccccCcccccCCCCCceEeeecCcc
Q 001873 204 RAGGNQNLKGELPWEIGNCSNLVMLGLAETSISGNVPSSIGMLERIQTIAIYTSLLSGPIPEEIGNCSELQNLYLYQNSI 283 (1001)
Q Consensus 204 ~l~~n~~l~~~lp~~l~~l~~L~~L~l~~~~l~~~~p~~i~~l~~L~~L~l~~n~l~g~ip~~l~~l~~L~~L~L~~N~i 283 (1001)
-+++|+ ++ .+|++++-+..|.+|+.+.|.+. .+|..++++.+|+.|.++.|.+. .+|++++.| .|..||++.|++
T Consensus 149 i~sNNk-l~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNki 223 (722)
T KOG0532|consen 149 IVSNNK-LT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKI 223 (722)
T ss_pred EEecCc-cc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCce
Confidence 555552 22 45666665566666666665554 33333344444444444444443 344444422 245555555555
Q ss_pred cCCCCcccCCCCCCcEEEcCCCccc
Q 001873 284 SGPIPGRIGALSKLKSLLLWQNSLV 308 (1001)
Q Consensus 284 ~~~~p~~~~~l~~L~~L~L~~N~l~ 308 (1001)
+ .+|-.|.+|+.|++|-|.+|-+.
T Consensus 224 s-~iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 224 S-YLPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred e-ecchhhhhhhhheeeeeccCCCC
Confidence 4 44444444444444444444444
No 459
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.42 E-value=7.4e-15 Score=160.57 Aligned_cols=174 Identities=30% Similarity=0.490 Sum_probs=108.2
Q ss_pred cceEEccccccccCCCcccCCCCCcceeeccCcccccCCcccccccccCceEEcccccCcccCCCCcc-cccccccCCCC
Q 001873 465 LRRLRLNDNRLSGTIPSEMGNLKHLNFVDMSENHLVGGIPPSVVGCQSLEFLDLHSNGLTGSVPDTLP-TSLQLVDLSDN 543 (1001)
Q Consensus 465 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~~l~~L~Ls~N 543 (1001)
-...||+.|++. .+|..+..+..|+.+.|.+|.+. .+|..++++..|++|||+.|+++ ..|..++ --|+.|.+++|
T Consensus 77 t~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lpLkvli~sNN 153 (722)
T KOG0532|consen 77 TVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLPLKVLIVSNN 153 (722)
T ss_pred hhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCcceeEEEecC
Confidence 345555556655 55555555555555666666655 45555666666666666666665 3333332 23555666666
Q ss_pred cCCCCcccccccccccceeeccCccccccchhhhhccccccEEecccccccCCCCCccccccchhhhhhcCCCccccccc
Q 001873 544 RLSGSLAHSIGSLTELSKLLLSKNQLSGRIPAEILSCRKLILLDIGNNRFSGEIPKELGQISSLEISLNLSSNQFSGEIP 623 (1001)
Q Consensus 544 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p 623 (1001)
+++ .+|..++.+..|..||.+.|.+. .+|..++.+.+|+.|++..|++. .+|.++..|+-.+ ||+|.|+++ .+|
T Consensus 154 kl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~LpLi~--lDfScNkis-~iP 227 (722)
T KOG0532|consen 154 KLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSLPLIR--LDFSCNKIS-YLP 227 (722)
T ss_pred ccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCCceee--eecccCcee-ecc
Confidence 665 45666666667777777777776 55666777777777777777776 5566666555443 677777776 566
Q ss_pred ccccccccccEEEecCCcCCCChh
Q 001873 624 SEFSGLTKLGILDLSHNKLSGDLD 647 (1001)
Q Consensus 624 ~~~~~l~~L~~L~Ls~N~l~~~~~ 647 (1001)
-.|..|+.|++|-|.+|+++..+.
T Consensus 228 v~fr~m~~Lq~l~LenNPLqSPPA 251 (722)
T KOG0532|consen 228 VDFRKMRHLQVLQLENNPLQSPPA 251 (722)
T ss_pred hhhhhhhhheeeeeccCCCCCChH
Confidence 677777777777777777776543
No 460
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.36 E-value=6.7e-13 Score=152.66 Aligned_cols=182 Identities=35% Similarity=0.502 Sum_probs=97.1
Q ss_pred CCccccccccccCCccCCCCChhhhccc-ccceEEccCCcccCCCCccccCCccccceeccccccccccCCCccchhhhh
Q 001873 123 GDYRELTFIDLSGNSLWGEIPTEVCRLR-KLESLYLNTNLLEGEIPSDIGNLSSLAYLTLYDNQLSGKIPKSIGALSKLQ 201 (1001)
Q Consensus 123 ~~l~~L~~L~Ls~n~l~g~~p~~~~~l~-~L~~L~L~~n~l~~~ip~~l~~L~~L~~L~L~~n~l~g~~p~~~~~l~~L~ 201 (1001)
..++.++.|++.+|.++ .+|...+.++ +|++|++++|++. .+|..++.+++|+.|++++|+++ .+|...+.+++|+
T Consensus 113 ~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~ 189 (394)
T COG4886 113 LELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLN 189 (394)
T ss_pred hcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhh
Confidence 33445555555555555 4555555553 5555555555555 44445555555555555555555 4554444555555
Q ss_pred hhhhccCcCCCCCCCcccccCccchhccccccccccccCCccccccccceeccccccccccCcccccCCCCCceEeeecC
Q 001873 202 VFRAGGNQNLKGELPWEIGNCSNLVMLGLAETSISGNVPSSIGMLERIQTIAIYTSLLSGPIPEEIGNCSELQNLYLYQN 281 (1001)
Q Consensus 202 ~L~l~~n~~l~~~lp~~l~~l~~L~~L~l~~~~l~~~~p~~i~~l~~L~~L~l~~n~l~g~ip~~l~~l~~L~~L~L~~N 281 (1001)
.|++++|+ +. .+|..++.+..|+++.++.|. .. .++..+.+++++..|.+.+|
T Consensus 190 ~L~ls~N~-i~-~l~~~~~~~~~L~~l~~~~N~------------------------~~-~~~~~~~~~~~l~~l~l~~n 242 (394)
T COG4886 190 NLDLSGNK-IS-DLPPEIELLSALEELDLSNNS------------------------II-ELLSSLSNLKNLSGLELSNN 242 (394)
T ss_pred heeccCCc-cc-cCchhhhhhhhhhhhhhcCCc------------------------ce-ecchhhhhcccccccccCCc
Confidence 55555552 21 333333333334444444432 11 34455566666666666666
Q ss_pred cccCCCCcccCCCCCCcEEEcCCCcccccCCCCccCCCCCCEEeccCCCCCCCCCc
Q 001873 282 SISGPIPGRIGALSKLKSLLLWQNSLVGAIPDELGSCTELTVVDFSDNLLTGSIPR 337 (1001)
Q Consensus 282 ~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 337 (1001)
++. ..+..++.+++++.|++++|+++. ++. ++.+.+++.|++++|.+....|.
T Consensus 243 ~~~-~~~~~~~~l~~l~~L~~s~n~i~~-i~~-~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 243 KLE-DLPESIGNLSNLETLDLSNNQISS-ISS-LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred eee-eccchhccccccceeccccccccc-ccc-ccccCccCEEeccCccccccchh
Confidence 665 235566666667777777776663 333 66666777777777766654443
No 461
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.35 E-value=1.5e-12 Score=149.86 Aligned_cols=199 Identities=33% Similarity=0.449 Sum_probs=112.0
Q ss_pred EEEcCCCcccccCCCCccCCCCCCEEeccCCCCCCCCCccccccc-CccEEEcccccccCcCChhhccccccCEEeccCC
Q 001873 299 SLLLWQNSLVGAIPDELGSCTELTVVDFSDNLLTGSIPRSFGNLL-KLQELQLSVNQLSGTIPIEIATCTALTHLEIDNN 377 (1001)
Q Consensus 299 ~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 377 (1001)
.+++..|.+.. .+..+..++.++.|++.+|.++ .+|.....+. +|+.|++++|++. .+|..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~-~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRS-NISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeecccccccc-CchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 46666666542 2233444566666666666666 4555555553 6666666666665 44445566666666666666
Q ss_pred cccCccCccccccCcccEEEeecCccCCCCCcccccCcccceEeCcCccccCCCCcccccccccceEEccCCcCCCCCCC
Q 001873 378 AISGEIPADIGNINGLTLFFAWKNKLTGNIPESLSQCQELQALDFSYNNLSGPIPKEIFGLRNLTKLLLLSNDLSGFIPP 457 (1001)
Q Consensus 378 ~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 457 (1001)
+++ .+|... +..+.|+.|++++|+++ .+|........|++|.+++|++. ..+.
T Consensus 174 ~l~-~l~~~~------------------------~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~ 226 (394)
T COG4886 174 DLS-DLPKLL------------------------SNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLS 226 (394)
T ss_pred hhh-hhhhhh------------------------hhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecch
Confidence 665 233333 24455555555555555 34444344444555566555432 2344
Q ss_pred CCCCCCCcceEEccccccccCCCcccCCCCCcceeeccCcccccCCcccccccccCceEEcccccCcccCCCC
Q 001873 458 DIGNCTTLRRLRLNDNRLSGTIPSEMGNLKHLNFVDMSENHLVGGIPPSVVGCQSLEFLDLHSNGLTGSVPDT 530 (1001)
Q Consensus 458 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 530 (1001)
.+..+.++..+.+.+|++. ..+..++.+..+++|++++|+++...+ +..+.+++.|++++|.++...|..
T Consensus 227 ~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 227 SLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLI 296 (394)
T ss_pred hhhhcccccccccCCceee-eccchhccccccceecccccccccccc--ccccCccCEEeccCccccccchhh
Confidence 5555666666666666665 335566666666666666666663322 666666677777776666544443
No 462
>PLN03150 hypothetical protein; Provisional
Probab=99.31 E-value=2.9e-12 Score=153.99 Aligned_cols=106 Identities=40% Similarity=0.572 Sum_probs=67.9
Q ss_pred ccceeeccCccccccchhhhhccccccEEecccccccCCCCCccccccchhhhhhcCCCcccccccccccccccccEEEe
Q 001873 558 ELSKLLLSKNQLSGRIPAEILSCRKLILLDIGNNRFSGEIPKELGQISSLEISLNLSSNQFSGEIPSEFSGLTKLGILDL 637 (1001)
Q Consensus 558 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 637 (1001)
.++.|+|++|.+++.+|..+..+++|+.|+|++|+|+|.+|..++.++.|+. |+|++|+++|.+|+.++++++|+.|+|
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~-LdLs~N~lsg~iP~~l~~L~~L~~L~L 497 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEV-LDLSYNSFNGSIPESLGQLTSLRILNL 497 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCE-EECCCCCCCCCCchHHhcCCCCCEEEC
Confidence 3566777777777777777777777777777777777777777777777765 777777777777776666666666666
Q ss_pred cCCcCCCC-hhhhhcc-cccceeEcccCC
Q 001873 638 SHNKLSGD-LDALASL-QNLVSLNVSFND 664 (1001)
Q Consensus 638 s~N~l~~~-~~~~~~l-~~L~~L~ls~N~ 664 (1001)
++|++++. |..+..+ .++..+++++|.
T Consensus 498 s~N~l~g~iP~~l~~~~~~~~~l~~~~N~ 526 (623)
T PLN03150 498 NGNSLSGRVPAALGGRLLHRASFNFTDNA 526 (623)
T ss_pred cCCcccccCChHHhhccccCceEEecCCc
Confidence 66666653 3333321 233444444443
No 463
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.28 E-value=1.2e-11 Score=143.01 Aligned_cols=153 Identities=12% Similarity=0.137 Sum_probs=99.7
Q ss_pred cccHHHHHhcccCCCeEeecCCeeEEEEEeCC-CCEEEEEEecCCCch--------------------------------
Q 001873 758 DFSIDDVVRNLTSANVIGTGSSGVVYRVTIPN-GETLAVKKMWSSDES-------------------------------- 804 (1001)
Q Consensus 758 ~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~-------------------------------- 804 (1001)
..+.+++...|+. +.+|+|++|+||+|+.++ |+.||||+.......
T Consensus 112 G~~~~~~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v 190 (537)
T PRK04750 112 GGPVEEWFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVV 190 (537)
T ss_pred CCCHHHHHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHH
Confidence 3456666777877 789999999999999887 999999988533100
Q ss_pred ----------hhHHHHHHHhhccC----CCceeeEEeee-ecCCceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHH
Q 001873 805 ----------GAFSSEIQTLGSIR----HKNIVRLLGWG-SNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVL 869 (1001)
Q Consensus 805 ----------~~~~~Ei~~l~~l~----h~nIv~l~~~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~ 869 (1001)
-++.+|+..+.+++ +...+.+-.++ ......++||||++|+.+.++-.-. ....+.....+..
T Consensus 191 ~e~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~-~~g~d~~~la~~~- 268 (537)
T PRK04750 191 AEFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALR-AAGTDMKLLAERG- 268 (537)
T ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHH-hcCCCHHHHHHHH-
Confidence 02444555555542 43334433333 2355678999999999998753211 1122222211111
Q ss_pred HHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCC----cEEEecccccccccC
Q 001873 870 GVAHALAYLHHDCMPPILHGDVKAMNVLLGPGY----QAYLADFGLARIVSG 917 (1001)
Q Consensus 870 ~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~----~~ki~Dfgla~~~~~ 917 (1001)
+..-+..++.. |++|+|+||.||+++.++ +++++|||++..++.
T Consensus 269 -v~~~~~Qif~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 269 -VEVFFTQVFRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred -HHHHHHHHHhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 11112233445 999999999999999888 999999999987743
No 464
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.24 E-value=2.2e-11 Score=122.21 Aligned_cols=130 Identities=18% Similarity=0.165 Sum_probs=96.8
Q ss_pred CCeEeecCCeeEEEEEeCCCCEEEEEEecCCC-chhhHHHHHHHhhccCCCcee-eEEeeeecCCceEEEEEccCCCCHH
Q 001873 771 ANVIGTGSSGVVYRVTIPNGETLAVKKMWSSD-ESGAFSSEIQTLGSIRHKNIV-RLLGWGSNKNLKLLFYDYLPNGSLS 848 (1001)
Q Consensus 771 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~Ei~~l~~l~h~nIv-~l~~~~~~~~~~~lv~e~~~~gsL~ 848 (1001)
++.++.|.++.||+++.. ++.|++|...... ....+.+|+.+++.+.+.+++ +++.+.. ...++||||++|.++.
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l~ 79 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSELL 79 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCccc
Confidence 356899999999999875 7889999875543 234578899999998655544 4554433 2348999999998776
Q ss_pred HHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCC--CCCeEEeCCCCCCeEECCCCcEEEeccccccc
Q 001873 849 SLLHGAGKGGADWEARYEVVLGVAHALAYLHHDC--MPPILHGDVKAMNVLLGPGYQAYLADFGLARI 914 (1001)
Q Consensus 849 ~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~--~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~ 914 (1001)
+. . . ....++.++++++..||+.. ..+++|+|++|.||+++ ++.++++|||.+..
T Consensus 80 ~~-~------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 80 TE-D------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cc-c------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 43 0 0 11245678999999999972 11259999999999999 67899999998864
No 465
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.15 E-value=2.3e-11 Score=148.92 Aligned_cols=127 Identities=28% Similarity=0.371 Sum_probs=87.3
Q ss_pred CCCcEEeccCCcccCCCCcccCCccccccccccCCc--cCCCCCh-hhhcccccceEEccCCcccCCCCccccCCccccc
Q 001873 102 KSLKRLIISSCNLTGTIPKEFGDYRELTFIDLSGNS--LWGEIPT-EVCRLRKLESLYLNTNLLEGEIPSDIGNLSSLAY 178 (1001)
Q Consensus 102 ~~L~~L~l~~~~l~g~~p~~~~~l~~L~~L~Ls~n~--l~g~~p~-~~~~l~~L~~L~L~~n~l~~~ip~~l~~L~~L~~ 178 (1001)
...++..+.+|.+. .++.+..+ +.|++|-+..|. +. .++. .|..|+.|++|||++|.=-+++|++|++|-+|++
T Consensus 523 ~~~rr~s~~~~~~~-~~~~~~~~-~~L~tLll~~n~~~l~-~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~Lry 599 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIE-HIAGSSEN-PKLRTLLLQRNSDWLL-EISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRY 599 (889)
T ss_pred hheeEEEEeccchh-hccCCCCC-CccceEEEeecchhhh-hcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhc
Confidence 45556666666654 33333322 257777777775 44 4444 3667888888888887655688888888888888
Q ss_pred eeccccccccccCCCccchhhhhhhhhccCcCCCCCCCcccccCccchhcccccc
Q 001873 179 LTLYDNQLSGKIPKSIGALSKLQVFRAGGNQNLKGELPWEIGNCSNLVMLGLAET 233 (1001)
Q Consensus 179 L~L~~n~l~g~~p~~~~~l~~L~~L~l~~n~~l~~~lp~~l~~l~~L~~L~l~~~ 233 (1001)
|+|++..++ .+|..+++|++|.+|++..+..+. .+|..+..|++|++|.+...
T Consensus 600 L~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~-~~~~i~~~L~~Lr~L~l~~s 652 (889)
T KOG4658|consen 600 LDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLE-SIPGILLELQSLRVLRLPRS 652 (889)
T ss_pred ccccCCCcc-ccchHHHHHHhhheeccccccccc-cccchhhhcccccEEEeecc
Confidence 888888887 788888888888888888774433 33555556777777777654
No 466
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.13 E-value=3.4e-10 Score=128.28 Aligned_cols=163 Identities=21% Similarity=0.303 Sum_probs=126.1
Q ss_pred CCCCEEEEEEecCCCc--hhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEccCCCCHHHHhhcCCCCCCCHHHHH
Q 001873 788 PNGETLAVKKMWSSDE--SGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARY 865 (1001)
Q Consensus 788 ~~~~~vavK~~~~~~~--~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~ 865 (1001)
.++.+|.|...+.... .+...+-++.++.++||||+++++.+..++..|+|+|-+ ..|..++++.+ .....
T Consensus 35 ~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~l~-----~~~v~ 107 (690)
T KOG1243|consen 35 ADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKELG-----KEEVC 107 (690)
T ss_pred ccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHHhH-----HHHHH
Confidence 3688888888765544 355778888899999999999999999999999999998 47888888643 34445
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCCCCCCCCcccccccccCccccc
Q 001873 866 EVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHAS 945 (1001)
Q Consensus 866 ~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 945 (1001)
..+.||++||.+||..| +++|++|.-..|++++.|+.||++|.++......+. ......---.|..|+.+.
T Consensus 108 ~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-------~~~~~~~~~s~~~P~~~~ 178 (690)
T KOG1243|consen 108 LGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-------PAKSLYLIESFDDPEEID 178 (690)
T ss_pred HHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-------ccccchhhhcccChhhcC
Confidence 56889999999999876 999999999999999999999999998875432211 011111122456666543
Q ss_pred cCCCCCccchHHHHHHHHHHHhC
Q 001873 946 MQRITEKSDVYSFGVVLLEVLTG 968 (1001)
Q Consensus 946 ~~~~~~~~Dv~SlG~il~elltg 968 (1001)
... ...|.|.||+++||++.|
T Consensus 179 ~s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 179 PSE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred ccc--cchhhhhHHHHHHHHhCc
Confidence 322 356999999999999999
No 467
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.12 E-value=6.4e-10 Score=106.21 Aligned_cols=141 Identities=21% Similarity=0.298 Sum_probs=106.7
Q ss_pred CCCeEeecCCeeEEEEEeCCCCEEEEEEecCCC----------chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 770 SANVIGTGSSGVVYRVTIPNGETLAVKKMWSSD----------ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 770 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~----------~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
....+-+|+-+.|+++.+ .|+.+.||.-.... ..++..+|++.+.+++--.|.-..-++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 456789999999999998 58888888543322 1256778999999987555544333444445557999
Q ss_pred EccCC-CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCC---cEEEeccccccc
Q 001873 840 DYLPN-GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGY---QAYLADFGLARI 914 (1001)
Q Consensus 840 e~~~~-gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~---~~ki~Dfgla~~ 914 (1001)
||++| .++.+++................+.+|-+.+.-||.. +|+|+||..+||++..++ .+.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99986 3889998876554444444467888899999999999 999999999999997654 458999999875
No 468
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.11 E-value=1.3e-11 Score=131.93 Aligned_cols=209 Identities=22% Similarity=0.239 Sum_probs=112.4
Q ss_pred cccccceEEccCCcCCCCCC-CCCCCCCCcceEEccccccccCC--CcccCCCCCcceeeccCcccccCCcccc-ccccc
Q 001873 437 GLRNLTKLLLLSNDLSGFIP-PDIGNCTTLRRLRLNDNRLSGTI--PSEMGNLKHLNFVDMSENHLVGGIPPSV-VGCQS 512 (1001)
Q Consensus 437 ~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~ 512 (1001)
++.+|+++.|.+........ .....|++++.||||.|-+.... ..-...+++|+.|+|+.|++........ ..++.
T Consensus 119 n~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~ 198 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSH 198 (505)
T ss_pred hHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhh
Confidence 46667777777777652211 24556777777777777666321 2233456667777777776653222111 12455
Q ss_pred CceEEcccccCcccCCCCcccccccccCCCCcCCCCcccccccccccceeeccCccccccchhhhhccccccEEeccccc
Q 001873 513 LEFLDLHSNGLTGSVPDTLPTSLQLVDLSDNRLSGSLAHSIGSLTELSKLLLSKNQLSGRIPAEILSCRKLILLDIGNNR 592 (1001)
Q Consensus 513 L~~L~Ls~N~l~~~~p~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 592 (1001)
|+.|.++.|.|+-. .+......+++|+.|+|+.|..-..-.....-+..|++|||++|+
T Consensus 199 lK~L~l~~CGls~k---------------------~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~ 257 (505)
T KOG3207|consen 199 LKQLVLNSCGLSWK---------------------DVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNN 257 (505)
T ss_pred hheEEeccCCCCHH---------------------HHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCc
Confidence 55566666655411 111112234555555555553211222223334455555555555
Q ss_pred ccCCC-CCccccccchhhhhhcCCCccccccccc------ccccccccEEEecCCcCCC--ChhhhhcccccceeEcccC
Q 001873 593 FSGEI-PKELGQISSLEISLNLSSNQFSGEIPSE------FSGLTKLGILDLSHNKLSG--DLDALASLQNLVSLNVSFN 663 (1001)
Q Consensus 593 l~~~~-p~~~~~l~~L~~~L~Ls~N~l~~~~p~~------~~~l~~L~~L~Ls~N~l~~--~~~~~~~l~~L~~L~ls~N 663 (1001)
+-... -...+.++.|+. |+++.+.+..+--.. ...+++|+.|+++.|++.. ....+..+++|+.|....|
T Consensus 258 li~~~~~~~~~~l~~L~~-Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n 336 (505)
T KOG3207|consen 258 LIDFDQGYKVGTLPGLNQ-LNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLN 336 (505)
T ss_pred ccccccccccccccchhh-hhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhcccc
Confidence 44221 123344555554 555555555432222 2456788888888888854 4566777788888888888
Q ss_pred CCCC
Q 001873 664 DFSG 667 (1001)
Q Consensus 664 ~l~~ 667 (1001)
.++.
T Consensus 337 ~ln~ 340 (505)
T KOG3207|consen 337 YLNK 340 (505)
T ss_pred cccc
Confidence 7754
No 469
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.10 E-value=1e-10 Score=131.67 Aligned_cols=200 Identities=25% Similarity=0.267 Sum_probs=157.2
Q ss_pred hcccCCCeEee--cCCeeEEEEEe---CCCCEEEEEEecCC----CchhhHHHHHHHhhccC-CCceeeEEeeeecCCce
Q 001873 766 RNLTSANVIGT--GSSGVVYRVTI---PNGETLAVKKMWSS----DESGAFSSEIQTLGSIR-HKNIVRLLGWGSNKNLK 835 (1001)
Q Consensus 766 ~~~~~~~~lG~--G~fg~Vy~~~~---~~~~~vavK~~~~~----~~~~~~~~Ei~~l~~l~-h~nIv~l~~~~~~~~~~ 835 (1001)
..+.+.+.+|. |.+|.||.+.. .+++.+|+|+-+.. .....=.+|+..-++++ |++.++.+..+...+..
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l 193 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL 193 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcc
Confidence 44566778999 99999999876 36889999974332 23344556777777774 99999988899999999
Q ss_pred EEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHH----HHHHHhhCCCCCeEEeCCCCCCeEECCC-CcEEEeccc
Q 001873 836 LLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAH----ALAYLHHDCMPPILHGDVKAMNVLLGPG-YQAYLADFG 910 (1001)
Q Consensus 836 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~----~l~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~ki~Dfg 910 (1001)
++-+|++. .++.++.+.. ...++....+.+..+..+ |+.++|+. +++|-|+||.||+...+ ..++.+|||
T Consensus 194 fiqtE~~~-~sl~~~~~~~-~~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~df~ 268 (524)
T KOG0601|consen 194 FIQTELCG-ESLQSYCHTP-CNFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTDFG 268 (524)
T ss_pred eeeecccc-chhHHhhhcc-cccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCCcc
Confidence 99999884 7888887754 233667777888888888 99999998 99999999999999998 899999999
Q ss_pred ccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCC
Q 001873 911 LARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLD 973 (1001)
Q Consensus 911 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~ 973 (1001)
+...+....-....... ....|...|++||... ..++..+|+||+|.+..+..++-.+.-
T Consensus 269 ~v~~i~~~~~~~~~~~~--~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~ 328 (524)
T KOG0601|consen 269 LVSKISDGNFSSVFKVS--KRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPS 328 (524)
T ss_pred eeEEccCCccccceeee--ecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhccccc
Confidence 99988765432222211 2225777899999886 467789999999999999988766544
No 470
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.10 E-value=2.5e-11 Score=123.02 Aligned_cols=131 Identities=28% Similarity=0.283 Sum_probs=66.1
Q ss_pred CCCcceeeccCcccccCCcccccccccCceEEcccccCcccCCCCcccccccccCCCCcCCCCcccccccccccceeecc
Q 001873 486 LKHLNFVDMSENHLVGGIPPSVVGCQSLEFLDLHSNGLTGSVPDTLPTSLQLVDLSDNRLSGSLAHSIGSLTELSKLLLS 565 (1001)
Q Consensus 486 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 565 (1001)
...|+.+|||+|.|+ .+.++..-++.++.|++|+|.|.. ...+..+++|+.||||
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~------------------------v~nLa~L~~L~~LDLS 337 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT------------------------VQNLAELPQLQLLDLS 337 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEeccccceee------------------------ehhhhhcccceEeecc
Confidence 344555555555555 344444444555555555555441 1125556666777777
Q ss_pred CccccccchhhhhccccccEEecccccccCCCCCccccccchhhhhhcCCCcccccc-cccccccccccEEEecCCcCCC
Q 001873 566 KNQLSGRIPAEILSCRKLILLDIGNNRFSGEIPKELGQISSLEISLNLSSNQFSGEI-PSEFSGLTKLGILDLSHNKLSG 644 (1001)
Q Consensus 566 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~ 644 (1001)
+|.++ .+-.+-..+.+++.|.|+.|.+. .-..++.+.+|.. ||+++|+|...- -..+++|+-|+++.|.+|++..
T Consensus 338 ~N~Ls-~~~Gwh~KLGNIKtL~La~N~iE--~LSGL~KLYSLvn-LDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 338 GNLLA-ECVGWHLKLGNIKTLKLAQNKIE--TLSGLRKLYSLVN-LDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred cchhH-hhhhhHhhhcCEeeeehhhhhHh--hhhhhHhhhhhee-ccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 77666 33344445566666666666653 1223344444443 555555554211 1224455555555555555554
Q ss_pred C
Q 001873 645 D 645 (1001)
Q Consensus 645 ~ 645 (1001)
.
T Consensus 414 ~ 414 (490)
T KOG1259|consen 414 S 414 (490)
T ss_pred c
Confidence 3
No 471
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.09 E-value=1.9e-11 Score=123.77 Aligned_cols=135 Identities=26% Similarity=0.279 Sum_probs=81.5
Q ss_pred cccccCcccceEeCcCccccCCCCcccccccccceEEccCCcCCCCCCCCCCCCCCcceEEccccccccCCCcccCCCCC
Q 001873 409 ESLSQCQELQALDFSYNNLSGPIPKEIFGLRNLTKLLLLSNDLSGFIPPDIGNCTTLRRLRLNDNRLSGTIPSEMGNLKH 488 (1001)
Q Consensus 409 ~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 488 (1001)
......+.|+++|||+|.|+ .+.....-.+.++.|++++|.+... ..+..+++|+.||||+|.++ .+..+-..+.+
T Consensus 278 ~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGN 353 (490)
T KOG1259|consen 278 VSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGN 353 (490)
T ss_pred EecchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcC
Confidence 34444566777777777776 4555555566777777777777633 23666677777777777776 44445555666
Q ss_pred cceeeccCcccccCCcccccccccCceEEcccccCcccCCCCcccccccccCCCCcCCCCcccccccccccceeeccCcc
Q 001873 489 LNFVDMSENHLVGGIPPSVVGCQSLEFLDLHSNGLTGSVPDTLPTSLQLVDLSDNRLSGSLAHSIGSLTELSKLLLSKNQ 568 (1001)
Q Consensus 489 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 568 (1001)
++.|.|++|.|... ..+..+-+|..||+++|+|... .-...+++++-|+++.|.+|.
T Consensus 354 IKtL~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~l---------------------deV~~IG~LPCLE~l~L~~NP 410 (490)
T KOG1259|consen 354 IKTLKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEEL---------------------DEVNHIGNLPCLETLRLTGNP 410 (490)
T ss_pred EeeeehhhhhHhhh--hhhHhhhhheeccccccchhhH---------------------HHhcccccccHHHHHhhcCCC
Confidence 66667777766521 3344555566666666665411 112345666666666666666
Q ss_pred cc
Q 001873 569 LS 570 (1001)
Q Consensus 569 l~ 570 (1001)
+.
T Consensus 411 l~ 412 (490)
T KOG1259|consen 411 LA 412 (490)
T ss_pred cc
Confidence 66
No 472
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.09 E-value=1.2e-09 Score=109.79 Aligned_cols=133 Identities=14% Similarity=0.183 Sum_probs=96.3
Q ss_pred CeEeecCCeeEEEEEeCC-------CCEEEEEEecCCC------------c------------hhhH----HHHHHHhhc
Q 001873 772 NVIGTGSSGVVYRVTIPN-------GETLAVKKMWSSD------------E------------SGAF----SSEIQTLGS 816 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~~-------~~~vavK~~~~~~------------~------------~~~~----~~Ei~~l~~ 816 (1001)
..||.|--+.||.|...+ +..+|||..+... + .+.+ .+|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 478999999999997543 4799999652100 0 1122 379999999
Q ss_pred cCC--CceeeEEeeeecCCceEEEEEccCCCCHHH-HhhcCCCCCCCHHHHHHHHHHHHHHHHHH-hhCCCCCeEEeCCC
Q 001873 817 IRH--KNIVRLLGWGSNKNLKLLFYDYLPNGSLSS-LLHGAGKGGADWEARYEVVLGVAHALAYL-HHDCMPPILHGDVK 892 (1001)
Q Consensus 817 l~h--~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~~~~~~~i~~~i~~~l~yL-H~~~~~~ivH~Dlk 892 (1001)
+.. -++.+.+++ ...++||||+.++.+.. .+++ ...+..+..++..+++.++.++ |+. ++||||++
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGDLs 152 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHADLS 152 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHHhC---CeecCCCC
Confidence 853 456666664 34589999997654422 2322 2244556667789999999999 776 99999999
Q ss_pred CCCeEECCCCcEEEecccccccc
Q 001873 893 AMNVLLGPGYQAYLADFGLARIV 915 (1001)
Q Consensus 893 p~NIll~~~~~~ki~Dfgla~~~ 915 (1001)
+.||+++ ++.++|+|||.|...
T Consensus 153 ~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 153 EYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred HHHEEEE-CCcEEEEECCCceeC
Confidence 9999997 468999999988754
No 473
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.08 E-value=2.5e-11 Score=139.80 Aligned_cols=175 Identities=33% Similarity=0.394 Sum_probs=84.5
Q ss_pred cccCcccceEeCcCccccCCCCcccccccccceEEccCCcCCCCCCCCCCCCCCcceEEccccccccCCCcccCCCCCcc
Q 001873 411 LSQCQELQALDFSYNNLSGPIPKEIFGLRNLTKLLLLSNDLSGFIPPDIGNCTTLRRLRLNDNRLSGTIPSEMGNLKHLN 490 (1001)
Q Consensus 411 l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 490 (1001)
+..+++|+.|++..|+|.. +...+..+++|++|++++|.|+.+. .+..++.|+.|++++|.|+.. ..+..+..|+
T Consensus 91 l~~~~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~l~~N~i~~~--~~~~~l~~L~ 165 (414)
T KOG0531|consen 91 LSKLKSLEALDLYDNKIEK-IENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELNLSGNLISDI--SGLESLKSLK 165 (414)
T ss_pred cccccceeeeeccccchhh-cccchhhhhcchheecccccccccc--chhhccchhhheeccCcchhc--cCCccchhhh
Confidence 3444455555555555542 1212444555555555555555432 233444566666666666522 2344456666
Q ss_pred eeeccCcccccCCc-ccccccccCceEEcccccCcccCCCCcccccccccCCCCcCCCCccccccccc--ccceeeccCc
Q 001873 491 FVDMSENHLVGGIP-PSVVGCQSLEFLDLHSNGLTGSVPDTLPTSLQLVDLSDNRLSGSLAHSIGSLT--ELSKLLLSKN 567 (1001)
Q Consensus 491 ~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~--~L~~L~Ls~N 567 (1001)
.+++++|+++..-+ . ...+.+++.+++++|.+...-.......+..+++..|+++..-+ +..+. .|+.+++++|
T Consensus 166 ~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i~~~~~~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n 242 (414)
T KOG0531|consen 166 LLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREIEGLDLLKKLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGN 242 (414)
T ss_pred cccCCcchhhhhhhhh-hhhccchHHHhccCCchhcccchHHHHHHHHhhcccccceeccC--cccchhHHHHHHhcccC
Confidence 66666666654333 1 34555666666666665522222222233334555555543221 11122 2556666666
Q ss_pred cccccchhhhhccccccEEeccccccc
Q 001873 568 QLSGRIPAEILSCRKLILLDIGNNRFS 594 (1001)
Q Consensus 568 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 594 (1001)
++. ..+..+..+.++..|++++|++.
T Consensus 243 ~i~-~~~~~~~~~~~l~~l~~~~n~~~ 268 (414)
T KOG0531|consen 243 RIS-RSPEGLENLKNLPVLDLSSNRIS 268 (414)
T ss_pred ccc-cccccccccccccccchhhcccc
Confidence 655 32234444555555555555554
No 474
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.07 E-value=3.7e-11 Score=147.08 Aligned_cols=128 Identities=29% Similarity=0.379 Sum_probs=101.2
Q ss_pred CCCcEEeccCCc--ccCCCCc-ccCCccccccccccCCccCCCCChhhhcccccceEEccCCcccCCCCccccCCccccc
Q 001873 102 KSLKRLIISSCN--LTGTIPK-EFGDYRELTFIDLSGNSLWGEIPTEVCRLRKLESLYLNTNLLEGEIPSDIGNLSSLAY 178 (1001)
Q Consensus 102 ~~L~~L~l~~~~--l~g~~p~-~~~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~L~~n~l~~~ip~~l~~L~~L~~ 178 (1001)
+.|+.|-+.+|. +. .++. .|..++.|++||||+|.=-+.+|.+|+.|-+||+|+|++..++ .+|..+++|..|.+
T Consensus 545 ~~L~tLll~~n~~~l~-~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~ 622 (889)
T KOG4658|consen 545 PKLRTLLLQRNSDWLL-EISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIY 622 (889)
T ss_pred CccceEEEeecchhhh-hcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhhe
Confidence 367788888886 44 4554 4788999999999998877899999999999999999999999 99999999999999
Q ss_pred eeccccccccccCCCccchhhhhhhhhccCc-CCCCCCCcccccCccchhcccc
Q 001873 179 LTLYDNQLSGKIPKSIGALSKLQVFRAGGNQ-NLKGELPWEIGNCSNLVMLGLA 231 (1001)
Q Consensus 179 L~L~~n~l~g~~p~~~~~l~~L~~L~l~~n~-~l~~~lp~~l~~l~~L~~L~l~ 231 (1001)
|++..+.....+|..+..|++|++|.+..-. ..++..-.++.+|.+|+.+...
T Consensus 623 Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~ 676 (889)
T KOG4658|consen 623 LNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSIT 676 (889)
T ss_pred eccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheee
Confidence 9999998877788888889999999987652 1222222344455555555543
No 475
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.07 E-value=1e-09 Score=115.50 Aligned_cols=140 Identities=21% Similarity=0.271 Sum_probs=109.3
Q ss_pred CeEeecCCeeEEEEEeCCCCEEEEEEecCCCc---hhhHHHHHHHhhccCC--CceeeEEeeeecC---CceEEEEEccC
Q 001873 772 NVIGTGSSGVVYRVTIPNGETLAVKKMWSSDE---SGAFSSEIQTLGSIRH--KNIVRLLGWGSNK---NLKLLFYDYLP 843 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~Ei~~l~~l~h--~nIv~l~~~~~~~---~~~~lv~e~~~ 843 (1001)
+.+|.|.++.||+++..+|+.+++|....... ..++.+|+++++.+++ ..+.+++.+.... +..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 56899999999999987678999998765432 4678999999999975 4467777776654 25689999999
Q ss_pred CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCC-----------------------------------------
Q 001873 844 NGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDC----------------------------------------- 882 (1001)
Q Consensus 844 ~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~----------------------------------------- 882 (1001)
|.++.+.+.. ...+......++.++++++.+||+..
T Consensus 84 G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
T cd05154 84 GRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL 160 (223)
T ss_pred CEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 9888776531 23567777778888888888888521
Q ss_pred ------------CCCeEEeCCCCCCeEECC--CCcEEEeccccccc
Q 001873 883 ------------MPPILHGDVKAMNVLLGP--GYQAYLADFGLARI 914 (1001)
Q Consensus 883 ------------~~~ivH~Dlkp~NIll~~--~~~~ki~Dfgla~~ 914 (1001)
...++|+|++|.||+++. ++.+.|+||+.+..
T Consensus 161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 145799999999999998 66789999998764
No 476
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.05 E-value=2.5e-11 Score=139.78 Aligned_cols=247 Identities=28% Similarity=0.329 Sum_probs=112.9
Q ss_pred CCCCCcEEEcCCCcccccCCCCccCCCCCCEEeccCCCCCCCCCcccccccCccEEEcccccccCcCChhhccccccCEE
Q 001873 293 ALSKLKSLLLWQNSLVGAIPDELGSCTELTVVDFSDNLLTGSIPRSFGNLLKLQELQLSVNQLSGTIPIEIATCTALTHL 372 (1001)
Q Consensus 293 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 372 (1001)
.+..++.+++..|.+.. +-..+..+++|+.|++.+|+|.. +...+..+++|++|+|++|+|+... .+..++.|+.|
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L 145 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEK-IENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKEL 145 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhh-cccchhhhhcchheecccccccccc--chhhccchhhh
Confidence 34444455555555542 22334455555555555555552 2222444555555555555554332 22333334445
Q ss_pred eccCCcccCccCccccccCcccEEEeecCccCCCCCcccccCcccceEeCcCccccCCCCcccccccccceEEccCCcCC
Q 001873 373 EIDNNAISGEIPADIGNINGLTLFFAWKNKLTGNIPESLSQCQELQALDFSYNNLSGPIPKEIFGLRNLTKLLLLSNDLS 452 (1001)
Q Consensus 373 ~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 452 (1001)
++++|.|+.. ..+..+..|+.+++++|++....+.....+.+++.+.+.+|.+.
T Consensus 146 ~l~~N~i~~~--------------------------~~~~~l~~L~~l~l~~n~i~~ie~~~~~~~~~l~~l~l~~n~i~ 199 (414)
T KOG0531|consen 146 NLSGNLISDI--------------------------SGLESLKSLKLLDLSYNRIVDIENDELSELISLEELDLGGNSIR 199 (414)
T ss_pred eeccCcchhc--------------------------cCCccchhhhcccCCcchhhhhhhhhhhhccchHHHhccCCchh
Confidence 5555444310 12222445555555555554322200244455555555555554
Q ss_pred CCCCCCCCCCCCcceEEccccccccCCCcccCCCC--CcceeeccCcccccCCcccccccccCceEEcccccCcccCCCC
Q 001873 453 GFIPPDIGNCTTLRRLRLNDNRLSGTIPSEMGNLK--HLNFVDMSENHLVGGIPPSVVGCQSLEFLDLHSNGLTGSVPDT 530 (1001)
Q Consensus 453 ~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 530 (1001)
.. ..+..+..+..+++..|+++..-+ +..+. +|+.+++++|.+. ..+..+..+..+..|++++|++...-.
T Consensus 200 ~i--~~~~~~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~~~-- 272 (414)
T KOG0531|consen 200 EI--EGLDLLKKLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNLEG-- 272 (414)
T ss_pred cc--cchHHHHHHHHhhcccccceeccC--cccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccccc--
Confidence 22 223333444444555555542211 11112 2555666666655 222344455555555555555543221
Q ss_pred cccccccccCCCCcCCCCcccccccccccceeeccCccccc---cchhh-hhccccccEEecccccccCCCC
Q 001873 531 LPTSLQLVDLSDNRLSGSLAHSIGSLTELSKLLLSKNQLSG---RIPAE-ILSCRKLILLDIGNNRFSGEIP 598 (1001)
Q Consensus 531 ~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~---~~p~~-~~~l~~L~~L~Ls~N~l~~~~p 598 (1001)
+.....+..+.+..|++.. ..... ....+.+..+.+..|.+....+
T Consensus 273 ----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 273 ----------------------LERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred ----------------------ccccchHHHhccCcchhcchhhhhccccccccccccccccccCccccccc
Confidence 2233444455555555431 11111 3445666677777776664444
No 477
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.05 E-value=1.7e-10 Score=118.95 Aligned_cols=155 Identities=23% Similarity=0.393 Sum_probs=115.2
Q ss_pred HHhhccCCCceeeEEeeeecCC-----ceEEEEEccCCCCHHHHhhcCCCC--CCCHHHHHHHHHHHHHHHHHHhhCCCC
Q 001873 812 QTLGSIRHKNIVRLLGWGSNKN-----LKLLFYDYLPNGSLSSLLHGAGKG--GADWEARYEVVLGVAHALAYLHHDCMP 884 (1001)
Q Consensus 812 ~~l~~l~h~nIv~l~~~~~~~~-----~~~lv~e~~~~gsL~~~l~~~~~~--~~~~~~~~~i~~~i~~~l~yLH~~~~~ 884 (1001)
.-+-.+.|.|+|+++.|+.+.+ ...++.|||..|++.+++++.... .+....-.++.-||..|+.|||+ |.|
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~P 197 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CDP 197 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cCC
Confidence 3344557999999999886544 457889999999999999875433 34666667899999999999999 789
Q ss_pred CeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHH
Q 001873 885 PILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLE 964 (1001)
Q Consensus 885 ~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~e 964 (1001)
+|+|+++..+-|++..+|-+||.--.-..... ............-.+-++|.|||.-.....+-++|||+||++..|
T Consensus 198 piihgnlTc~tifiq~ngLIkig~~ap~s~h~---s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAle 274 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHP---SVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALE 274 (458)
T ss_pred ccccCCcchhheeecCCceEEecccCccccch---hhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHH
Confidence 99999999999999999988875211111000 000011111222246689999998877778889999999999999
Q ss_pred HHhCCC
Q 001873 965 VLTGRH 970 (1001)
Q Consensus 965 lltg~~ 970 (1001)
|.-+..
T Consensus 275 mailEi 280 (458)
T KOG1266|consen 275 MAILEI 280 (458)
T ss_pred HHHhee
Confidence 988765
No 478
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.04 E-value=8.5e-11 Score=115.71 Aligned_cols=124 Identities=25% Similarity=0.263 Sum_probs=36.0
Q ss_pred cccccCceEEcccccCcccCCCC-cccccccccCCCCcCCCCcccccccccccceeeccCccccccchhhh-hccccccE
Q 001873 508 VGCQSLEFLDLHSNGLTGSVPDT-LPTSLQLVDLSDNRLSGSLAHSIGSLTELSKLLLSKNQLSGRIPAEI-LSCRKLIL 585 (1001)
Q Consensus 508 ~~l~~L~~L~Ls~N~l~~~~p~~-~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~ 585 (1001)
.+..+++.|+|++|+|+..-.-. ....++.|+||+|.|+... .+..+++|++|++++|+|+.. ++.+ ..+++|++
T Consensus 16 ~n~~~~~~L~L~~n~I~~Ie~L~~~l~~L~~L~Ls~N~I~~l~--~l~~L~~L~~L~L~~N~I~~i-~~~l~~~lp~L~~ 92 (175)
T PF14580_consen 16 NNPVKLRELNLRGNQISTIENLGATLDKLEVLDLSNNQITKLE--GLPGLPRLKTLDLSNNRISSI-SEGLDKNLPNLQE 92 (175)
T ss_dssp --------------------S--TT-TT--EEE-TTS--S--T--T----TT--EEE--SS---S--CHHHHHH-TT--E
T ss_pred ccccccccccccccccccccchhhhhcCCCEEECCCCCCcccc--CccChhhhhhcccCCCCCCcc-ccchHHhCCcCCE
Confidence 34445566666666665211111 1123444555555554321 244445555555555555422 2222 23445555
Q ss_pred EecccccccCCCCCccccccchhhhhhcCCCccccccc-ccccccccccEEEecCCcCCCCh----hhhhcccccceeE
Q 001873 586 LDIGNNRFSGEIPKELGQISSLEISLNLSSNQFSGEIP-SEFSGLTKLGILDLSHNKLSGDL----DALASLQNLVSLN 659 (1001)
Q Consensus 586 L~Ls~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~----~~~~~l~~L~~L~ 659 (1001)
|++++|+|. .... ..+..+++|+.|+|.+|+++... ..+..+|+|+.||
T Consensus 93 L~L~~N~I~-------------------------~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD 146 (175)
T PF14580_consen 93 LYLSNNKIS-------------------------DLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLD 146 (175)
T ss_dssp EE-TTS----------------------------SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEET
T ss_pred EECcCCcCC-------------------------ChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeC
Confidence 555555543 2111 23556788888899999887643 3567888888887
No 479
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.04 E-value=1.7e-09 Score=104.32 Aligned_cols=129 Identities=23% Similarity=0.411 Sum_probs=97.3
Q ss_pred CeEeecCCeeEEEEEeCCCCEEEEEEecCCC----------chhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEEEc
Q 001873 772 NVIGTGSSGVVYRVTIPNGETLAVKKMWSSD----------ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDY 841 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~----------~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~e~ 841 (1001)
..+++|+-+.+|.+.+. |.++++|.-..+. ...+-.+|++++++++--.|....=++.+.+...|+|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 35789999999999874 4556676432211 114566799999998765555555555566667899999
Q ss_pred cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEeccccccc
Q 001873 842 LPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARI 914 (1001)
Q Consensus 842 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~ 914 (1001)
++|..|.+.+... ...++..+-.-+.-||.. +|+|+|+.++||.+..++ +.++|||++..
T Consensus 81 I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA---------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc---------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9999999998753 134555666667789998 999999999999998765 99999999975
No 480
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.99 E-value=2.2e-11 Score=126.80 Aligned_cols=91 Identities=26% Similarity=0.316 Sum_probs=54.9
Q ss_pred ccccCCCCcEEeccCCcccC----CCCcccCCccccccccccCC---ccCCCCChhh-------hcccccceEEccCCcc
Q 001873 97 IFQPLKSLKRLIISSCNLTG----TIPKEFGDYRELTFIDLSGN---SLWGEIPTEV-------CRLRKLESLYLNTNLL 162 (1001)
Q Consensus 97 ~~~~l~~L~~L~l~~~~l~g----~~p~~~~~l~~L~~L~Ls~n---~l~g~~p~~~-------~~l~~L~~L~L~~n~l 162 (1001)
.+.++..+++++|++|.+.- .+.+.+.+.++|+.-++|+- ++..++|+.+ -..++|++||||.|-|
T Consensus 25 ~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~ 104 (382)
T KOG1909|consen 25 ELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAF 104 (382)
T ss_pred HhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeecccccc
Confidence 34456677777777776641 23455667777777777762 2333556543 3345777777777776
Q ss_pred cCCCCcc----ccCCccccceeccccccc
Q 001873 163 EGEIPSD----IGNLSSLAYLTLYDNQLS 187 (1001)
Q Consensus 163 ~~~ip~~----l~~L~~L~~L~L~~n~l~ 187 (1001)
.-.-+.. |.+++.|++|.|.+|.+.
T Consensus 105 G~~g~~~l~~ll~s~~~L~eL~L~N~Glg 133 (382)
T KOG1909|consen 105 GPKGIRGLEELLSSCTDLEELYLNNCGLG 133 (382)
T ss_pred CccchHHHHHHHHhccCHHHHhhhcCCCC
Confidence 5433332 345566777777766654
No 481
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.98 E-value=5.4e-10 Score=82.70 Aligned_cols=40 Identities=48% Similarity=1.057 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHhCC-CCCCccCCCCCCC-CCCCccceEEeC
Q 001873 36 DEQGQALLTWKNSLN-SSTDALSSWNPAE-TSPCKWFGIHCS 75 (1001)
Q Consensus 36 ~~~~~aLl~~k~~~~-~~~~~l~sW~~~~-~~~c~w~gv~c~ 75 (1001)
++|++||++||+++. +|.+.+.+|+..+ .+||+|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 579999999999996 6779999998643 799999999996
No 482
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.97 E-value=2.3e-10 Score=112.74 Aligned_cols=110 Identities=31% Similarity=0.359 Sum_probs=42.6
Q ss_pred cccccccceeeccCccccccchhhhh-ccccccEEecccccccCCCCCccccccchhhhhhcCCCccccccccccccccc
Q 001873 553 IGSLTELSKLLLSKNQLSGRIPAEIL-SCRKLILLDIGNNRFSGEIPKELGQISSLEISLNLSSNQFSGEIPSEFSGLTK 631 (1001)
Q Consensus 553 ~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~L~Ls~N~l~~~~p~~~~~l~~ 631 (1001)
+.+..++++|+|.+|+|+.+ +.++ .+.+|+.||||+|.|+. ++ .+..++.|+. |++++|+|+.+.+.....+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~-L~L~~N~I~~i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKT-LDLSNNRISSISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---T-T----TT--E-EE--SS---S-CHHHHHH-TT
T ss_pred cccccccccccccccccccc--cchhhhhcCCCEEECCCCCCcc-cc-CccChhhhhh-cccCCCCCCccccchHHhCCc
Confidence 44455778888888888733 3455 47788888888888874 32 5777888886 889999888643322346899
Q ss_pred ccEEEecCCcCCC--ChhhhhcccccceeEcccCCCCC
Q 001873 632 LGILDLSHNKLSG--DLDALASLQNLVSLNVSFNDFSG 667 (1001)
Q Consensus 632 L~~L~Ls~N~l~~--~~~~~~~l~~L~~L~ls~N~l~~ 667 (1001)
|++|+|++|+|.. +...+..+++|++|++.+|+++.
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~ 127 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCE 127 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGG
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccc
Confidence 9999999999987 56788999999999999999863
No 483
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.94 E-value=1.6e-10 Score=123.57 Aligned_cols=209 Identities=22% Similarity=0.245 Sum_probs=105.9
Q ss_pred CCCCCCcEEEcCCCcccccCC--CCccCCCCCCEEeccCCCCCCCCC--cccccccCccEEEcccccccCcCChh-hccc
Q 001873 292 GALSKLKSLLLWQNSLVGAIP--DELGSCTELTVVDFSDNLLTGSIP--RSFGNLLKLQELQLSVNQLSGTIPIE-IATC 366 (1001)
Q Consensus 292 ~~l~~L~~L~L~~N~l~~~~p--~~l~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l 366 (1001)
.++++|+...|.+.... ..+ .....|++++.||||+|-+..-.| .....|++|+.|+|+.|++....... -..+
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 45778888888888776 333 245667888888888887763222 22345777777777777765221111 1133
Q ss_pred cccCEEeccCCcccCccCccccccCcccEEEeecCccCCCCCcccccCcccceEeCcCccccCCCCcccccccccceEEc
Q 001873 367 TALTHLEIDNNAISGEIPADIGNINGLTLFFAWKNKLTGNIPESLSQCQELQALDFSYNNLSGPIPKEIFGLRNLTKLLL 446 (1001)
Q Consensus 367 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 446 (1001)
+.|+.|.|+.|.++.. .+-..+..+++|+.|+|.+|..-..-......+..|+.|+|
T Consensus 197 ~~lK~L~l~~CGls~k-----------------------~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdL 253 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWK-----------------------DVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDL 253 (505)
T ss_pred hhhheEEeccCCCCHH-----------------------HHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccc
Confidence 4444444444444311 11112334555666666666422222223334455556666
Q ss_pred cCCcCCCCCC-CCCCCCCCcceEEccccccccCC-Ccc-----cCCCCCcceeeccCcccccC-CcccccccccCceEEc
Q 001873 447 LSNDLSGFIP-PDIGNCTTLRRLRLNDNRLSGTI-PSE-----MGNLKHLNFVDMSENHLVGG-IPPSVVGCQSLEFLDL 518 (1001)
Q Consensus 447 ~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~-p~~-----~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L 518 (1001)
++|++..+.- ...+.++.|+.|+++.+.++..- |+. ...+++|++|+++.|++... .-..+..+++|+.|.+
T Consensus 254 s~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~ 333 (505)
T KOG3207|consen 254 SNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRI 333 (505)
T ss_pred cCCcccccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhc
Confidence 6655543221 23445555666666666555321 111 23345566666666665421 0112233344455555
Q ss_pred ccccCc
Q 001873 519 HSNGLT 524 (1001)
Q Consensus 519 s~N~l~ 524 (1001)
..|.|+
T Consensus 334 ~~n~ln 339 (505)
T KOG3207|consen 334 TLNYLN 339 (505)
T ss_pred cccccc
Confidence 555554
No 484
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.93 E-value=6.7e-11 Score=123.31 Aligned_cols=248 Identities=22% Similarity=0.277 Sum_probs=112.2
Q ss_pred ccccCCCCCceEeeecCcccCC----CCcccCCCCCCcEEEcCCC---cccccCCCC-------ccCCCCCCEEeccCCC
Q 001873 265 EEIGNCSELQNLYLYQNSISGP----IPGRIGALSKLKSLLLWQN---SLVGAIPDE-------LGSCTELTVVDFSDNL 330 (1001)
Q Consensus 265 ~~l~~l~~L~~L~L~~N~i~~~----~p~~~~~l~~L~~L~L~~N---~l~~~~p~~-------l~~l~~L~~L~Ls~N~ 330 (1001)
+.+-.+..+++++|++|.+... +...+.+.++|+..++++= ++...+|+. +..+++|++||||+|.
T Consensus 24 ~~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA 103 (382)
T KOG1909|consen 24 EELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNA 103 (382)
T ss_pred HHhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccc
Confidence 3455667777777777777633 2233445566666666532 122233332 2334456666666666
Q ss_pred CCCCCCccc----ccccCccEEEcccccccCcCChhhccccccCEEeccCCcccCccCccccccCcccEEEeecCccCCC
Q 001873 331 LTGSIPRSF----GNLLKLQELQLSVNQLSGTIPIEIATCTALTHLEIDNNAISGEIPADIGNINGLTLFFAWKNKLTGN 406 (1001)
Q Consensus 331 l~~~~p~~~----~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~ 406 (1001)
|....++.| .+...|++|+|.+|.+...--..++ ..|..|. .|+ -.++-+.|+.+...+|++...
T Consensus 104 ~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~--~al~~l~--~~k-------k~~~~~~Lrv~i~~rNrlen~ 172 (382)
T KOG1909|consen 104 FGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLG--RALFELA--VNK-------KAASKPKLRVFICGRNRLENG 172 (382)
T ss_pred cCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHH--HHHHHHH--HHh-------ccCCCcceEEEEeeccccccc
Confidence 653333332 2334455555555544311101100 0111111 111 112234455555555555422
Q ss_pred C----CcccccCcccceEeCcCccccCC----CCcccccccccceEEccCCcCCCC----CCCCCCCCCCcceEEccccc
Q 001873 407 I----PESLSQCQELQALDFSYNNLSGP----IPKEIFGLRNLTKLLLLSNDLSGF----IPPDIGNCTTLRRLRLNDNR 474 (1001)
Q Consensus 407 ~----p~~l~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~Ls~N~ 474 (1001)
. ...|...+.|+.+.++.|.|... +...+..+++|+.|+|..|-++.. +...++.+++|++|++++|.
T Consensus 173 ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcl 252 (382)
T KOG1909|consen 173 GATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCL 252 (382)
T ss_pred cHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccc
Confidence 1 12344555666666666666421 122344555555555555555422 22334445555555555555
Q ss_pred cccCCCccc-----CCCCCcceeeccCcccccC----CcccccccccCceEEcccccC
Q 001873 475 LSGTIPSEM-----GNLKHLNFVDMSENHLVGG----IPPSVVGCQSLEFLDLHSNGL 523 (1001)
Q Consensus 475 l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l 523 (1001)
++..-...| ...+.|+.|.|.+|.|+.. +...+...+.|+.|+|++|++
T Consensus 253 l~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 253 LENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred cccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 543222221 1234555555555555421 112222344455555555544
No 485
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.85 E-value=3.4e-08 Score=105.30 Aligned_cols=139 Identities=15% Similarity=0.149 Sum_probs=101.1
Q ss_pred CeEeecCCeeEEEEEeCCCCEEEEEEecCCCch-------------hhHHHHHHHhhccCCCce--eeEEeeeec-----
Q 001873 772 NVIGTGSSGVVYRVTIPNGETLAVKKMWSSDES-------------GAFSSEIQTLGSIRHKNI--VRLLGWGSN----- 831 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~-------------~~~~~Ei~~l~~l~h~nI--v~l~~~~~~----- 831 (1001)
+.+-+.....|+++.+ +|+.|.||+....... ..+.+|...+.++...+| ++.+++...
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 4455555555777776 5789999976433211 147789999988854333 344444432
Q ss_pred CCceEEEEEccCCC-CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECC-------CCc
Q 001873 832 KNLKLLFYDYLPNG-SLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGP-------GYQ 903 (1001)
Q Consensus 832 ~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~-------~~~ 903 (1001)
...-++|+|++++. +|.+++.+......+......++.+++..+.-||.. ||+|+|++++|||++. ++.
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~~ 183 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDLK 183 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCce
Confidence 23468999999876 899998643233456667778999999999999998 9999999999999975 468
Q ss_pred EEEeccccccc
Q 001873 904 AYLADFGLARI 914 (1001)
Q Consensus 904 ~ki~Dfgla~~ 914 (1001)
+.++||+.++.
T Consensus 184 ~~LIDl~r~~~ 194 (268)
T PRK15123 184 LSVIDLHRAQI 194 (268)
T ss_pred EEEEECCcccc
Confidence 99999998754
No 486
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.82 E-value=1.2e-10 Score=131.16 Aligned_cols=126 Identities=31% Similarity=0.327 Sum_probs=79.5
Q ss_pred cccccCCCCcCCCCcccccccccccceeeccCccccccchhhhhccccccEEecccccccCCCCCccccccchhhhhhcC
Q 001873 535 LQLVDLSDNRLSGSLAHSIGSLTELSKLLLSKNQLSGRIPAEILSCRKLILLDIGNNRFSGEIPKELGQISSLEISLNLS 614 (1001)
Q Consensus 535 l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~~L~Ls 614 (1001)
+...+.++|++. ....++.-++.|+.|||++|+++.. +.+..+++|++|||++|+|+ .+|..-..--.|.. |+++
T Consensus 166 L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~L~~-L~lr 240 (1096)
T KOG1859|consen 166 LATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCKLQL-LNLR 240 (1096)
T ss_pred HhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhhhhee-eeec
Confidence 444555556555 3444555667777777777777644 36677777777777777776 44432222222665 7777
Q ss_pred CCcccccccccccccccccEEEecCCcCCC--ChhhhhcccccceeEcccCCCCC
Q 001873 615 SNQFSGEIPSEFSGLTKLGILDLSHNKLSG--DLDALASLQNLVSLNVSFNDFSG 667 (1001)
Q Consensus 615 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~l~~L~~L~ls~N~l~~ 667 (1001)
+|-++.. ..+.+|.+|+.|||+.|-|.+ ....++.|..|+.|+|.||++..
T Consensus 241 nN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 241 NNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred ccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcccc
Confidence 7777633 235667777777777777766 34556777777777777777754
No 487
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.79 E-value=1.9e-09 Score=121.48 Aligned_cols=191 Identities=19% Similarity=0.164 Sum_probs=142.5
Q ss_pred HhcccCCCeEeecCCeeEEEEEe--CCCCEEEEEEecCCCc----hhhHHHHHHHhhcc-CCCceeeEEeeeecCCceEE
Q 001873 765 VRNLTSANVIGTGSSGVVYRVTI--PNGETLAVKKMWSSDE----SGAFSSEIQTLGSI-RHKNIVRLLGWGSNKNLKLL 837 (1001)
Q Consensus 765 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~~vavK~~~~~~~----~~~~~~Ei~~l~~l-~h~nIv~l~~~~~~~~~~~l 837 (1001)
..+|..+..||.|.|+.|++... .++..|++|....... ...-..|+.+...+ -|.+++..+..+..-...++
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~i 343 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYI 343 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccC
Confidence 35677788999999999998764 3678899997644321 12234567676666 48888888776666666679
Q ss_pred EEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCC-CcEEEeccccccccc
Q 001873 838 FYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPG-YQAYLADFGLARIVS 916 (1001)
Q Consensus 838 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~ki~Dfgla~~~~ 916 (1001)
--||+++++....+.- ...+++..++++..|++.++.++|+. .++|+|+||+||++..+ +..++.|||++..+.
T Consensus 344 p~e~~~~~s~~l~~~~--~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~ 418 (524)
T KOG0601|consen 344 PLEFCEGGSSSLRSVT--SQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGCWTRLA 418 (524)
T ss_pred chhhhcCcchhhhhHH--HHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhccccccccccc
Confidence 9999999988776632 22356777888999999999999997 99999999999999876 788899999986432
Q ss_pred CCCCCCCCCCCCCCccccccccc--CccccccCCCCCccchHHHHHHHHHHHhCCC
Q 001873 917 GSGDDNCSKTNQRPQLAGSYGYM--APEHASMQRITEKSDVYSFGVVLLEVLTGRH 970 (1001)
Q Consensus 917 ~~~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~Dv~SlG~il~elltg~~ 970 (1001)
-. . ....++.+++ +|+......+..+.|+||||.-+.|..++..
T Consensus 419 ~~---------~-~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ 464 (524)
T KOG0601|consen 419 FS---------S-GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSP 464 (524)
T ss_pred ee---------c-ccccccccccccchhhccccccccccccccccccccccccCcc
Confidence 10 0 0011233444 5556667788899999999999999999864
No 488
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.79 E-value=1.8e-09 Score=127.39 Aligned_cols=209 Identities=25% Similarity=0.279 Sum_probs=146.0
Q ss_pred hcccCCCeEeecCCeeEEEEEeC-CCCEEEEEEecCC-----CchhhHHHHHHHhhccCCCceeeEEeeeecCCceEEEE
Q 001873 766 RNLTSANVIGTGSSGVVYRVTIP-NGETLAVKKMWSS-----DESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFY 839 (1001)
Q Consensus 766 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~Ei~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 839 (1001)
+.+.+.+-+.+|.++.++.++-. .|...+.|..... .+.+...++-.+.-..++|.++..+..+......++|+
T Consensus 804 d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~ 883 (1205)
T KOG0606|consen 804 DGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVG 883 (1205)
T ss_pred ccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhh
Confidence 34555667888999999876532 3433333322111 11122222222222335677877776666667789999
Q ss_pred EccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCC
Q 001873 840 DYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSG 919 (1001)
Q Consensus 840 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~ 919 (1001)
+|..++++...++..+. .+.+........+.++.+|||+. .+.|||++|.|++...+++.+++|||.......-.
T Consensus 884 ~~~~~~~~~Skl~~~~~--~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~ 958 (1205)
T KOG0606|consen 884 HYLNGGDLPSKLHNSGC--LSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIP 958 (1205)
T ss_pred HHhccCCchhhhhcCCC--cccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCcccccccccccc
Confidence 99999999999987542 45555556677788999999997 69999999999999999999999998443221100
Q ss_pred -------C---------------CCCCC--CCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 001873 920 -------D---------------DNCSK--TNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPT 975 (1001)
Q Consensus 920 -------~---------------~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~Pf~~~ 975 (1001)
. ..... ........||+.|.|||...+......+|.|+.|++++|.++|..||...
T Consensus 959 p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~ 1038 (1205)
T KOG0606|consen 959 PTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAE 1038 (1205)
T ss_pred CcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCc
Confidence 0 00000 01234567999999999999999999999999999999999999999876
Q ss_pred CCCC
Q 001873 976 LPGG 979 (1001)
Q Consensus 976 ~~~~ 979 (1001)
++.+
T Consensus 1039 tpq~ 1042 (1205)
T KOG0606|consen 1039 TPQQ 1042 (1205)
T ss_pred chhh
Confidence 5443
No 489
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.69 E-value=1.2e-08 Score=82.48 Aligned_cols=60 Identities=33% Similarity=0.542 Sum_probs=34.8
Q ss_pred CcceEEccccccccCCCcccCCCCCcceeeccCcccccCCcccccccccCceEEcccccC
Q 001873 464 TLRRLRLNDNRLSGTIPSEMGNLKHLNFVDMSENHLVGGIPPSVVGCQSLEFLDLHSNGL 523 (1001)
Q Consensus 464 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 523 (1001)
+|++|++++|+++...+..|.++++|++|++++|+++...|..|.++++|++|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 455555555555544445555566666666666666555555566666666666666553
No 490
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.69 E-value=6.3e-08 Score=99.15 Aligned_cols=132 Identities=20% Similarity=0.282 Sum_probs=94.9
Q ss_pred cCCCeEeecCCeeEEEEEeCCCCEEEEEEecC----------CC--------------chhhHHHHHHHhhccCCC--ce
Q 001873 769 TSANVIGTGSSGVVYRVTIPNGETLAVKKMWS----------SD--------------ESGAFSSEIQTLGSIRHK--NI 822 (1001)
Q Consensus 769 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~----------~~--------------~~~~~~~Ei~~l~~l~h~--nI 822 (1001)
.+...||-|--+.||.|..+.|.++|||.=+. .. .....++|.++|+++... .|
T Consensus 94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V 173 (304)
T COG0478 94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV 173 (304)
T ss_pred hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence 45678999999999999999999999993210 00 012466899999999655 77
Q ss_pred eeEEeeeecCCceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCC
Q 001873 823 VRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGY 902 (1001)
Q Consensus 823 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~ 902 (1001)
.+.+++ +..++||||++|-.|...--+ ..... .+...|+.-+.-.-.. ||||+|+.+-||+++++|
T Consensus 174 P~P~~~----nRHaVvMe~ieG~eL~~~r~~----~en~~---~il~~il~~~~~~~~~---GiVHGDlSefNIlV~~dg 239 (304)
T COG0478 174 PKPIAW----NRHAVVMEYIEGVELYRLRLD----VENPD---EILDKILEEVRKAYRR---GIVHGDLSEFNILVTEDG 239 (304)
T ss_pred CCcccc----ccceeeeehcccceeecccCc----ccCHH---HHHHHHHHHHHHHHHc---CccccCCchheEEEecCC
Confidence 777776 345899999998776654311 11222 2333333333333344 999999999999999999
Q ss_pred cEEEeccccccc
Q 001873 903 QAYLADFGLARI 914 (1001)
Q Consensus 903 ~~ki~Dfgla~~ 914 (1001)
.+.++||-.+..
T Consensus 240 ~~~vIDwPQ~v~ 251 (304)
T COG0478 240 DIVVIDWPQAVP 251 (304)
T ss_pred CEEEEeCccccc
Confidence 999999987654
No 491
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.69 E-value=1e-07 Score=95.67 Aligned_cols=123 Identities=23% Similarity=0.362 Sum_probs=80.8
Q ss_pred eEEEEEeCCCCEEEEEEecCCC--------------c--------------hhhHHHHHHHhhccCCC--ceeeEEeeee
Q 001873 781 VVYRVTIPNGETLAVKKMWSSD--------------E--------------SGAFSSEIQTLGSIRHK--NIVRLLGWGS 830 (1001)
Q Consensus 781 ~Vy~~~~~~~~~vavK~~~~~~--------------~--------------~~~~~~Ei~~l~~l~h~--nIv~l~~~~~ 830 (1001)
.||.|...+|..+|||..+... . .....+|++.|.++..- ++.+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 4899998899999999653210 0 02466799999999755 466666552
Q ss_pred cCCceEEEEEccC--CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH-hhCCCCCeEEeCCCCCCeEECCCCcEEEe
Q 001873 831 NKNLKLLFYDYLP--NGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYL-HHDCMPPILHGDVKAMNVLLGPGYQAYLA 907 (1001)
Q Consensus 831 ~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yL-H~~~~~~ivH~Dlkp~NIll~~~~~~ki~ 907 (1001)
..++||||++ |..+..+.... .+......++.+++..+..+ |.. ||+|+|+.+.||+++++ .+.|+
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~----~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~iI 148 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD----LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVYII 148 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG----GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEEE-
T ss_pred ---CCEEEEEecCCCccchhhHHhcc----ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEEEE
Confidence 3479999998 65554443321 11233455667777766664 566 99999999999999987 99999
Q ss_pred cccccccc
Q 001873 908 DFGLARIV 915 (1001)
Q Consensus 908 Dfgla~~~ 915 (1001)
|||.|...
T Consensus 149 Df~qav~~ 156 (188)
T PF01163_consen 149 DFGQAVDS 156 (188)
T ss_dssp -GTTEEET
T ss_pred ecCcceec
Confidence 99988753
No 492
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.66 E-value=1.9e-08 Score=81.38 Aligned_cols=59 Identities=29% Similarity=0.412 Sum_probs=29.2
Q ss_pred CCceEeeecCcccCCCCcccCCCCCCcEEEcCCCcccccCCCCccCCCCCCEEeccCCC
Q 001873 272 ELQNLYLYQNSISGPIPGRIGALSKLKSLLLWQNSLVGAIPDELGSCTELTVVDFSDNL 330 (1001)
Q Consensus 272 ~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 330 (1001)
+|++|++++|+++...++.|..+++|++|++++|+++...|..|..+++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34455555555554444445555555555555555544444444455555555555444
No 493
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.61 E-value=4.6e-07 Score=99.85 Aligned_cols=166 Identities=18% Similarity=0.266 Sum_probs=125.1
Q ss_pred CCeeEEEEEe-CCCCEEEEEEecCCCch--hhHHHHHHHhhccCCCceeeEEeeee----cCCceEEEEEccCC-CCHHH
Q 001873 778 SSGVVYRVTI-PNGETLAVKKMWSSDES--GAFSSEIQTLGSIRHKNIVRLLGWGS----NKNLKLLFYDYLPN-GSLSS 849 (1001)
Q Consensus 778 ~fg~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~Ei~~l~~l~h~nIv~l~~~~~----~~~~~~lv~e~~~~-gsL~~ 849 (1001)
...+.|++.. .+|..|++|++...+.. ..-..-+++++++.|+|||++.+++. .+...++||+|+++ ++|.+
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence 4456788874 48999999998332221 23345678899999999999999775 34577899999986 47777
Q ss_pred HhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEeccccccccc
Q 001873 850 LLHGAG-------------KGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVS 916 (1001)
Q Consensus 850 ~l~~~~-------------~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~ 916 (1001)
+-.... +...++...|.++.|+..|+.++|+. |..-+-+.|++|+++.+.+++|...|....+.
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~ 444 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVLQ 444 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeeec
Confidence 653221 22357889999999999999999999 99999999999999999999999988876654
Q ss_pred CCCCCCCCCCCCCCcccccccccCccccccCCCCCccchHHHHHHHHHHHhCCC
Q 001873 917 GSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRH 970 (1001)
Q Consensus 917 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlG~il~elltg~~ 970 (1001)
.+. + |-+. --.+-|.-.||.++..+.||..
T Consensus 445 ~d~--------------~-------~~le---~~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 445 EDP--------------T-------EPLE---SQQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred CCC--------------C-------cchh---HHhhhhHHHHHHHHHHHhhccc
Confidence 321 0 1111 1135599999999999999954
No 494
>PRK09902 hypothetical protein; Provisional
Probab=98.53 E-value=1.6e-06 Score=87.42 Aligned_cols=137 Identities=16% Similarity=0.099 Sum_probs=102.4
Q ss_pred EeecCCeeEEEEEeCCCCEEEEEEecC--------CCchhhHHHHHHHhhccCCCc--eeeEEeeee--cC--CceEEEE
Q 001873 774 IGTGSSGVVYRVTIPNGETLAVKKMWS--------SDESGAFSSEIQTLGSIRHKN--IVRLLGWGS--NK--NLKLLFY 839 (1001)
Q Consensus 774 lG~G~fg~Vy~~~~~~~~~vavK~~~~--------~~~~~~~~~Ei~~l~~l~h~n--Iv~l~~~~~--~~--~~~~lv~ 839 (1001)
-|+||-+-|+..... |+.+-+|+... +.....|.+|+..++++..-+ +.++..+.. .. -.-++|+
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT 104 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence 367888899998874 55788997531 233467999999999995322 444442211 11 1346999
Q ss_pred EccCC-CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCc--EEEeccccccc
Q 001873 840 DYLPN-GSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQ--AYLADFGLARI 914 (1001)
Q Consensus 840 e~~~~-gsL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~--~ki~Dfgla~~ 914 (1001)
|-+++ .+|.+++.+......+...+..+..++++.+.-||+. ++.|+|+.+.||+++.++. ++++||.-++.
T Consensus 105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 97754 4899998765444567777889999999999999998 9999999999999986666 99999987654
No 495
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.51 E-value=5.2e-07 Score=104.14 Aligned_cols=150 Identities=19% Similarity=0.257 Sum_probs=98.1
Q ss_pred cHHHHHhcccCCCeEeecCCeeEEEEEeCCCCEEEEEEecCCCch--------------------------------h--
Q 001873 760 SIDDVVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDES--------------------------------G-- 805 (1001)
Q Consensus 760 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~--------------------------------~-- 805 (1001)
.+++...+|.. +-|+.++-|.||+|+.++|+.||||+....-.. +
T Consensus 120 ~iee~F~eF~~-~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~ 198 (517)
T COG0661 120 PIEELFSEFEP-EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEF 198 (517)
T ss_pred CHHHHHHHcCC-CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHH
Confidence 34444454443 579999999999999999999999976321100 0
Q ss_pred --------hHHHHHHHhhccC-----CCceeeEEeeeecCCceEEEEEccCCCCHHHHhhcCCCCCCCHHHHHHHHHHHH
Q 001873 806 --------AFSSEIQTLGSIR-----HKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVA 872 (1001)
Q Consensus 806 --------~~~~Ei~~l~~l~-----h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~i~ 872 (1001)
++.+|..-+.+++ .|.|.-..=|++......++|||++|..+.+...-. ....+... ++..++
T Consensus 199 ~~~l~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~-~~g~d~k~---ia~~~~ 274 (517)
T COG0661 199 EKRLREELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALK-SAGIDRKE---LAELLV 274 (517)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHH-hcCCCHHH---HHHHHH
Confidence 2444666555552 344432223344456679999999999888874221 12344333 333333
Q ss_pred HH-HHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccC
Q 001873 873 HA-LAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSG 917 (1001)
Q Consensus 873 ~~-l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~ 917 (1001)
++ +..+=.. |++|.|..|.||+++.+|++.+.|||+...+.+
T Consensus 275 ~~f~~q~~~d---gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 275 RAFLRQLLRD---GFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred HHHHHHHHhc---CccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 32 2222223 899999999999999999999999999887643
No 496
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.50 E-value=2e-06 Score=92.40 Aligned_cols=193 Identities=17% Similarity=0.257 Sum_probs=126.2
Q ss_pred cCCCeEeecCCeeEEEEEeCCCCEEEEEEecCCCchhhHHHHHHHhhcc-CCCceeeEEee------eec-CCceEEEEE
Q 001873 769 TSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSI-RHKNIVRLLGW------GSN-KNLKLLFYD 840 (1001)
Q Consensus 769 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~Ei~~l~~l-~h~nIv~l~~~------~~~-~~~~~lv~e 840 (1001)
...+.||+|+-+.+|.... -...+.|+...+....+ .+.+..|... .||-+-.-+.| .-+ +....++|.
T Consensus 14 ~~gr~LgqGgea~ly~l~e--~~d~VAKIYh~Pppa~~-aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflmP 90 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGE--VRDQVAKIYHAPPPAAQ-AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLMP 90 (637)
T ss_pred CCCccccCCccceeeecch--hhchhheeecCCCchHH-HHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEecc
Confidence 4567899999999997432 12224455544332211 1222333333 46544331222 112 223567888
Q ss_pred ccCCC-CHHHHhhc----CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccc
Q 001873 841 YLPNG-SLSSLLHG----AGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIV 915 (1001)
Q Consensus 841 ~~~~g-sL~~~l~~----~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~ 915 (1001)
.+++. ...++..- +......|.-..+.++.++.+...||.. |.+-+|+.++|+|+++++.+.+.|-..-...
T Consensus 91 ~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~ 167 (637)
T COG4248 91 KVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDSFQIN 167 (637)
T ss_pred cCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcccceeec
Confidence 87765 22222221 1123357888999999999999999998 9999999999999999999999886543332
Q ss_pred cCCCCCCCCCCCCCCcccccccccCccccc-----cCCCCCccchHHHHHHHHHHHhC-CCCCCCC
Q 001873 916 SGSGDDNCSKTNQRPQLAGSYGYMAPEHAS-----MQRITEKSDVYSFGVVLLEVLTG-RHPLDPT 975 (1001)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~SlG~il~elltg-~~Pf~~~ 975 (1001)
. ........+|...|.+||... +..-+...|-|.+|+++++++.| +.||.+-
T Consensus 168 ~--------ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI 225 (637)
T COG4248 168 A--------NGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGI 225 (637)
T ss_pred c--------CCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcc
Confidence 1 112223347999999999653 44556789999999999999875 9999764
No 497
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.45 E-value=5.5e-09 Score=118.03 Aligned_cols=124 Identities=28% Similarity=0.314 Sum_probs=85.2
Q ss_pred cccceEeCcCccccCCCCcccccccccceEEccCCcCCCCCCCCCCCCCCcceEEccccccccCCCc-ccCCCCCcceee
Q 001873 415 QELQALDFSYNNLSGPIPKEIFGLRNLTKLLLLSNDLSGFIPPDIGNCTTLRRLRLNDNRLSGTIPS-EMGNLKHLNFVD 493 (1001)
Q Consensus 415 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~ 493 (1001)
..|...+.++|.+. .....+.-++.|+.|+|++|+++.. ..+..++.|++|||+.|.+. .+|. ....++ |+.|.
T Consensus 164 n~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~ 238 (1096)
T KOG1859|consen 164 NKLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLN 238 (1096)
T ss_pred hhHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhhh-heeee
Confidence 35777888888887 4556677778888888888888754 37788888888888888888 4443 334444 88888
Q ss_pred ccCcccccCCcccccccccCceEEcccccCccc---CCCCcccccccccCCCCcC
Q 001873 494 MSENHLVGGIPPSVVGCQSLEFLDLHSNGLTGS---VPDTLPTSLQLVDLSDNRL 545 (1001)
Q Consensus 494 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~~l~~L~Ls~N~l 545 (1001)
+++|.++.. ..+.++++|+.||+++|-|.+. .|-+....++.|+|.+|.+
T Consensus 239 lrnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl 291 (1096)
T KOG1859|consen 239 LRNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPL 291 (1096)
T ss_pred ecccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcc
Confidence 888888743 3467788888888888887642 1212223344455555544
No 498
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.43 E-value=1.2e-06 Score=90.48 Aligned_cols=105 Identities=27% Similarity=0.410 Sum_probs=82.4
Q ss_pred hhHHHHHHHhhccCCCc--eeeEEeeeecC----CceEEEEEccCCC-CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHH
Q 001873 805 GAFSSEIQTLGSIRHKN--IVRLLGWGSNK----NLKLLFYDYLPNG-SLSSLLHGAGKGGADWEARYEVVLGVAHALAY 877 (1001)
Q Consensus 805 ~~~~~Ei~~l~~l~h~n--Iv~l~~~~~~~----~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~i~~~i~~~l~y 877 (1001)
....+|...+.++..-. +++.+++.... ...++|+|++++. +|.+++.+... .+......++.+++..+.-
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~--~~~~~~~~ll~~l~~~i~~ 133 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ--LDPSQRRELLRALARLIAK 133 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc--cchhhHHHHHHHHHHHHHH
Confidence 46778998888885333 44555554432 2347999999874 89999986322 5566677889999999999
Q ss_pred HhhCCCCCeEEeCCCCCCeEECCCC---cEEEeccccccc
Q 001873 878 LHHDCMPPILHGDVKAMNVLLGPGY---QAYLADFGLARI 914 (1001)
Q Consensus 878 LH~~~~~~ivH~Dlkp~NIll~~~~---~~ki~Dfgla~~ 914 (1001)
||.. ||+|+|+++.|||++.++ .+.++||+-++.
T Consensus 134 lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 134 LHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 9999 999999999999999877 899999998765
No 499
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.42 E-value=2.7e-06 Score=88.99 Aligned_cols=138 Identities=15% Similarity=0.182 Sum_probs=87.7
Q ss_pred CeEeecCCeeEEEEEeCCCCEEEEEEecCCCchhhHHHHHHHhhccCCCc--eeeEEeeeecCCceEEEEEccCCCC-HH
Q 001873 772 NVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGAFSSEIQTLGSIRHKN--IVRLLGWGSNKNLKLLFYDYLPNGS-LS 848 (1001)
Q Consensus 772 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~Ei~~l~~l~h~n--Iv~l~~~~~~~~~~~lv~e~~~~gs-L~ 848 (1001)
..||+|..+.||+. .+..+++|............+|.++++.+..-. +.+++++..+.+...+|||+++|.. +.
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~~ 83 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGFDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSFS 83 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccchh
Confidence 46899999999983 255788898766555567899999999986433 5677888777777889999999863 11
Q ss_pred HH---------------------hhcCCCCCCCHHHHH-HHHH----------HHHH-HHHHHhhC-CCCCeEEeCCCCC
Q 001873 849 SL---------------------LHGAGKGGADWEARY-EVVL----------GVAH-ALAYLHHD-CMPPILHGDVKAM 894 (1001)
Q Consensus 849 ~~---------------------l~~~~~~~~~~~~~~-~i~~----------~i~~-~l~yLH~~-~~~~ivH~Dlkp~ 894 (1001)
.. ++............. ++.. .+.. ..++|... ..+.++|+|+.|.
T Consensus 84 ~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~~~ 163 (226)
T TIGR02172 84 RIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQIG 163 (226)
T ss_pred hhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCCCC
Confidence 11 121111111111110 0000 0111 12222211 1235789999999
Q ss_pred CeEECCCCcEEEecccccc
Q 001873 895 NVLLGPGYQAYLADFGLAR 913 (1001)
Q Consensus 895 NIll~~~~~~ki~Dfgla~ 913 (1001)
||++++++ +.|+||+.+.
T Consensus 164 Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 164 NLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred cEEEcCCC-cEEEechhcC
Confidence 99999888 9999999875
No 500
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.29 E-value=2e-07 Score=106.64 Aligned_cols=104 Identities=24% Similarity=0.398 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHhhCCCCCeEEeCCCCCCeEECCCCcEEEecccccccccCCCCCCCCCCCCC--CcccccccccCccccc
Q 001873 868 VLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQR--PQLAGSYGYMAPEHAS 945 (1001)
Q Consensus 868 ~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~~~~~--~~~~gt~~y~aPE~~~ 945 (1001)
+.+++.|+.|+|.. +++||++|.|++|.++.++..||+.|+.+....+..+..+...... .-..-...|.|||++.
T Consensus 105 l~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 34556999999987 6999999999999999999999999998876655333222222221 2223556899999999
Q ss_pred cCCCCCccchHHHHHHHHHHHh-CCCCCC
Q 001873 946 MQRITEKSDVYSFGVVLLEVLT-GRHPLD 973 (1001)
Q Consensus 946 ~~~~~~~~Dv~SlG~il~ellt-g~~Pf~ 973 (1001)
+...+.++|+||+|+.+|.+.. |+.-++
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~ 211 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIA 211 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhh
Confidence 8888899999999999999984 444343
Done!