Your job contains 1 sequence.
>001874
MAATMVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIILYEDEEFDQHQ
RQLAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAA
ESNDEAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTL
SYCINVSHSFVNRREYRREVLRLLVKVYQKLPSPDYLSICQCLMFLDEPEGVVSILEKLL
RSENKDDALLAFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDPPSAQNDSS
TAEDVQMNEGTPASNVNVQDEDPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKSDL
LILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATAGL
GVIHRGHLQQGRSLMAPYLPQGGAGGGGSPYSEGGALYALGLIHANHGEGIKQFLRDSLR
STNVEVIQHGACLGLGLAALGTADEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASE
KAGEMLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMYALA
LAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESYNPH
VRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDSRVG
TFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLSVFS
QFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTVPTTTSAVK
LPAAVLSTSAKAKARAKKEAEQKEKEKATAEKTDLSSAGKGKSSNEKDGDSMQVDAPPEK
KAEPEPSFEILINPARVVPAQEKFIKFLEDSRYVPVKSAPSGFVLLRDLRPNEPEVLSLT
DAPSSTQSPAGGGSTTGQQGSASAMAVDEEPQPPAPFEYTS
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001874
(1001 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2046402 - symbol:AT2G32730 species:3702 "Arabi... 3876 0. 1
TAIR|locus:2010672 - symbol:AT1G04810 species:3702 "Arabi... 3827 0. 1
ZFIN|ZDB-GENE-040426-810 - symbol:psmd1 "proteasome (pros... 2132 2.1e-226 2
UNIPROTKB|G3V8B6 - symbol:Psmd1 "26S proteasome non-ATPas... 2060 1.5e-221 2
UNIPROTKB|E1C5P3 - symbol:PSMD1 "26S proteasome non-ATPas... 2061 2.0e-221 2
MGI|MGI:1917497 - symbol:Psmd1 "proteasome (prosome, macr... 2055 4.1e-221 2
UNIPROTKB|A7MBA2 - symbol:PSMD1 "Uncharacterized protein"... 2050 5.2e-221 2
UNIPROTKB|F1NUT6 - symbol:PSMD1 "26S proteasome non-ATPas... 2055 8.5e-221 2
RGD|621669 - symbol:Psmd1 "proteasome (prosome, macropain... 2053 8.5e-221 2
UNIPROTKB|Q99460 - symbol:PSMD1 "26S proteasome non-ATPas... 2053 1.8e-220 2
UNIPROTKB|Q5R5S4 - symbol:PSMD1 "26S proteasome non-ATPas... 2052 2.2e-220 2
UNIPROTKB|F1LRN6 - symbol:Psmd1 "26S proteasome non-ATPas... 2048 2.9e-220 2
UNIPROTKB|Q5F418 - symbol:PSMD1 "26S proteasome non-ATPas... 2049 3.6e-220 2
UNIPROTKB|F1PX57 - symbol:PSMD1 "Uncharacterized protein"... 2029 6.1e-218 2
FB|FBgn0028692 - symbol:Rpn2 "Regulatory particle non-ATP... 2010 1.0e-216 3
DICTYBASE|DDB_G0287953 - symbol:psmD1 "26S proteasome reg... 1468 2.3e-205 2
ASPGD|ASPL0000047917 - symbol:AN1700 species:162425 "Emer... 1643 2.2e-189 2
UNIPROTKB|J9P4R4 - symbol:PSMD1 "Uncharacterized protein"... 1564 1.4e-160 1
SGD|S000001337 - symbol:RPN2 "Subunit of the 26S proteaso... 1186 5.3e-160 2
POMBASE|SPBC17D11.07c - symbol:rpn2 "19S proteasome regul... 1477 2.3e-151 1
GENEDB_PFALCIPARUM|PF14_0632 - symbol:PF14_0632 "26S prot... 933 2.9e-151 4
UNIPROTKB|Q8IKH3 - symbol:PF14_0632 "26S proteasome subun... 933 2.9e-151 4
CGD|CAL0003585 - symbol:RPN2 species:5476 "Candida albica... 1352 4.0e-138 1
WB|WBGene00004459 - symbol:rpn-2 species:6239 "Caenorhabd... 964 2.9e-114 2
UNIPROTKB|Q18115 - symbol:rpn-2 "26S proteasome non-ATPas... 964 2.9e-114 2
POMBASE|SPBP19A11.03c - symbol:mts4 "19S proteasome regul... 197 5.5e-12 2
ASPGD|ASPL0000062698 - symbol:AN10020 species:162425 "Eme... 178 3.3e-11 3
TAIR|locus:2121358 - symbol:RPN1B "26S proteasome regulat... 168 3.3e-10 4
TAIR|locus:2046016 - symbol:RPN1A "26S proteasome regulat... 167 6.7e-10 4
DICTYBASE|DDB_G0293752 - symbol:psmD2 "26S proteasome non... 160 2.6e-07 2
FB|FBgn0028695 - symbol:Rpn1 "Regulatory particle non-ATP... 90 2.5e-06 5
WB|WBGene00004458 - symbol:rpn-1 species:6239 "Caenorhabd... 131 3.0e-06 3
CGD|CAL0006334 - symbol:RPN1 species:5476 "Candida albica... 130 7.7e-05 3
>TAIR|locus:2046402 [details] [associations]
symbol:AT2G32730 species:3702 "Arabidopsis thaliana"
[GO:0000502 "proteasome complex" evidence=IEA;IDA] [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=ISS;TAS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006094 "gluconeogenesis"
evidence=RCA] [GO:0007010 "cytoskeleton organization" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0010498 "proteasomal
protein catabolic process" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051788
"response to misfolded protein" evidence=RCA] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
GO:GO:0005829 GO:GO:0030234 EMBL:CP002685 GenomeReviews:CT485783_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 EMBL:AC003974 eggNOG:COG5116
HOGENOM:HOG000189403 KO:K03032 Pfam:PF01851 EMBL:AY099861
IPI:IPI00538191 PIR:T00795 RefSeq:NP_180832.1 UniGene:At.19478
ProteinModelPortal:O48844 SMR:O48844 IntAct:O48844 STRING:O48844
PaxDb:O48844 PRIDE:O48844 ProMEX:O48844 EnsemblPlants:AT2G32730.1
GeneID:817833 KEGG:ath:AT2G32730 TAIR:At2g32730 InParanoid:O48844
OMA:LLCNFWG PhylomeDB:O48844 ProtClustDB:CLSN2681948
ArrayExpress:O48844 Genevestigator:O48844 Uniprot:O48844
Length = 1004
Score = 3876 (1369.5 bits), Expect = 0., P = 0.
Identities = 786/1009 (77%), Positives = 834/1009 (82%)
Query: 1 MAATMVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPII--LYEDEEFDQ 58
MA MVSSAGGLLAMLNE HP LKLHALSNLN+ VDQFWPEISTSVPII LYEDEEFD
Sbjct: 1 MATPMVSSAGGLLAMLNEPHPVLKLHALSNLNNLVDQFWPEISTSVPIIESLYEDEEFDL 60
Query: 59 HQRQLAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSK 118
HQRQLAALLVSKVFYYLGELNDSLSYALGAG LFDVSEDSDYVHTLLAKAIDEYAS++SK
Sbjct: 61 HQRQLAALLVSKVFYYLGELNDSLSYALGAGPLFDVSEDSDYVHTLLAKAIDEYASLRSK 120
Query: 119 AAESNDEAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHG 178
A ESN E ++DPRLEAIVERML KCI+DGKYQQAMGIAIECRRLDKLEEAI +SDNV G
Sbjct: 121 AVESN-EMVDIDPRLEAIVERMLGKCISDGKYQQAMGIAIECRRLDKLEEAIIKSDNVQG 179
Query: 179 TLSYCINVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEK 238
TLSYCINVSHSFVN QKLPSPDYLSICQCLMFLDEP+GV SILEK
Sbjct: 180 TLSYCINVSHSFVNRREYRHEVLSLLVKVYQKLPSPDYLSICQCLMFLDEPQGVASILEK 239
Query: 239 LLRSENKDDALLAFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDPPSAQND 298
LLRSENKDDALLA QIAFDLVENEHQAFLL+VRD LP PKT+ ++ Q + + A N+
Sbjct: 240 LLRSENKDDALLALQIAFDLVENEHQAFLLSVRDRLPAPKTRAVEATQ--AVETTIAPNE 297
Query: 299 SSTAEDVQMNEGTPASNVNVQDEDPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKS 358
+ + DVQM + TPA + V + DP + YAERL KIKGILSGETSIQLTLQFLYSHNKS
Sbjct: 298 NPSG-DVQMADETPAQTI-VHETDPVDATYAERLTKIKGILSGETSIQLTLQFLYSHNKS 355
Query: 359 DLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATA 418
DLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATA
Sbjct: 356 DLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATA 415
Query: 419 GLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDS 478
GLGVIHRGHLQQGRSLMAP YALGLIHANHGEGIKQFLRDS
Sbjct: 416 GLGVIHRGHLQQGRSLMAPYLPQGGAGGGGSPYSEGGALYALGLIHANHGEGIKQFLRDS 475
Query: 479 LRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTA 538
LRSTNVEVIQH DE+IYDD+K+VLYTDSAVAGEAAGISMGLL+VGTA
Sbjct: 476 LRSTNVEVIQHGACLGLGLSALGTADEEIYDDVKSVLYTDSAVAGEAAGISMGLLLVGTA 535
Query: 539 SEKAGEMLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMYA 598
+EKA EML YAHETQHEKIIRGLALGIALTVYGREE ADTLIEQMTRDQDPI+RYGGMYA
Sbjct: 536 TEKASEMLAYAHETQHEKIIRGLALGIALTVYGREEGADTLIEQMTRDQDPIIRYGGMYA 595
Query: 599 LALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESYN 658
LALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYS+PEQTPRIVSLLSESYN
Sbjct: 596 LALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSDPEQTPRIVSLLSESYN 655
Query: 659 PHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDSR 718
PHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQI+EA+DSR
Sbjct: 656 PHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQISEASDSR 715
Query: 719 VGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLSV 778
VG FRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDK+TAV+GL+V
Sbjct: 716 VGVFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKVTAVIGLAV 775
Query: 779 FSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTVPTTTSA 838
FSQFWYWYPLIYFISL+FSPTA IGLNYDLKVP+FEF+SHAKPSLFEYPKPTTVPT +A
Sbjct: 776 FSQFWYWYPLIYFISLAFSPTAFIGLNYDLKVPKFEFMSHAKPSLFEYPKPTTVPTANTA 835
Query: 839 VKLPAAVLSTSXXXXXXXXXXXXXXXXXXXXXXX---TDLSSAGKGKSSNEKDGDSMQVD 895
VKLP AVLSTS + S +GKGK+S EK+GDSMQVD
Sbjct: 836 VKLPTAVLSTSVKAKARAKKEAEQKAIAEKTSGPEKPVNESGSGKGKASTEKEGDSMQVD 895
Query: 896 XXXXXXXXXXX---SFEILINPARVVPAQEKFIKFLEDSRYVPVKSAPSGFVLLRDLRPN 952
+FEIL+NPARVVPAQEK+IK L+DSRYVPVK APSGFVLL+DLR +
Sbjct: 896 SPAAVEKKAPEPEPAFEILVNPARVVPAQEKYIKLLDDSRYVPVKLAPSGFVLLKDLREH 955
Query: 953 EPEVLSLTDXXXXXXXXXXXXXXXXXXXXXXXMAVDEEPQPPAPFEYTS 1001
EPEVLSLTD MAVD+EPQPP FEY S
Sbjct: 956 EPEVLSLTDAPTSTASPATGTAAAAQGTPASAMAVDDEPQPPQAFEYAS 1004
>TAIR|locus:2010672 [details] [associations]
symbol:AT1G04810 species:3702 "Arabidopsis thaliana"
[GO:0000502 "proteasome complex" evidence=IEA;IDA] [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=ISS;TAS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0030163 "protein catabolic
process" evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006094 "gluconeogenesis"
evidence=RCA] [GO:0006302 "double-strand break repair"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0007010 "cytoskeleton organization" evidence=RCA] [GO:0009407
"toxin catabolic process" evidence=RCA] [GO:0010332 "response to
gamma radiation" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051788
"response to misfolded protein" evidence=RCA] [GO:0080129
"proteasome core complex assembly" evidence=RCA] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
EMBL:CP002684 GO:GO:0005829 GO:GO:0005886 GO:GO:0005634
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0050790 GO:GO:0030163 GO:GO:0000502 GO:GO:0042176
EMBL:AC004809 HOGENOM:HOG000189403 KO:K03032 OMA:CVENAEL
Pfam:PF01851 ProtClustDB:CLSN2681948 EMBL:BT004007 IPI:IPI00520284
PIR:C86181 RefSeq:NP_171973.1 UniGene:At.19689
ProteinModelPortal:Q9MAT0 SMR:Q9MAT0 IntAct:Q9MAT0 STRING:Q9MAT0
PRIDE:Q9MAT0 ProMEX:Q9MAT0 EnsemblPlants:AT1G04810.1 GeneID:839409
KEGG:ath:AT1G04810 TAIR:At1g04810 InParanoid:Q9MAT0
PhylomeDB:Q9MAT0 ArrayExpress:Q9MAT0 Genevestigator:Q9MAT0
Uniprot:Q9MAT0
Length = 1001
Score = 3827 (1352.2 bits), Expect = 0., P = 0.
Identities = 775/1010 (76%), Positives = 833/1010 (82%)
Query: 1 MAATMVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPII--LYEDEEFDQ 58
MAA MVSSAGGLLAMLNE HPSLKLHALS L VDQFWPEISTSVPII LYEDEEFDQ
Sbjct: 1 MAAAMVSSAGGLLAMLNEPHPSLKLHALSYLIRLVDQFWPEISTSVPIIESLYEDEEFDQ 60
Query: 59 HQRQLAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSK 118
HQRQLAALL SKVFYYLGELNDSLSYALGAGSLFDVSEDSDY+HTLL+KAIDEYA ++SK
Sbjct: 61 HQRQLAALLASKVFYYLGELNDSLSYALGAGSLFDVSEDSDYIHTLLSKAIDEYAILRSK 120
Query: 119 AAESNDEAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHG 178
A ES+ E +DPRL AIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAI +S+NV G
Sbjct: 121 AVESS-EVVEIDPRLVAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAIIKSENVQG 179
Query: 179 TLSYCINVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEK 238
TLSYCINVSHSFVN QKL SPDYLSICQCLMFLDEP+GV SILEK
Sbjct: 180 TLSYCINVSHSFVNQREYRHEVLRLLVNVYQKLASPDYLSICQCLMFLDEPQGVASILEK 239
Query: 239 LLRSENKDDALLAFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDPPSAQND 298
LLRSENKDDALLAFQI+FDLV+NEHQAFL++VRD LP PKT+P++ +Q + + +AQN+
Sbjct: 240 LLRSENKDDALLAFQISFDLVQNEHQAFLMSVRDRLPAPKTRPVEAIQ--AVETSTAQNE 297
Query: 299 SSTAEDVQMNEGTPASNVNVQDEDPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKS 358
+ TA DVQM + TP+ + V + DP + +YAERL K KGILSGETSIQLTLQFLYSHNKS
Sbjct: 298 N-TAGDVQMADETPSQTI-VHETDPVDAVYAERLTKAKGILSGETSIQLTLQFLYSHNKS 355
Query: 359 DLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATA 418
DLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATA
Sbjct: 356 DLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATA 415
Query: 419 GLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDS 478
GLGVIHRGHLQQGRSLMAP YALGLIHANHGEGIKQFLRDS
Sbjct: 416 GLGVIHRGHLQQGRSLMAPYLPQGGAGGGGSPYSEGGALYALGLIHANHGEGIKQFLRDS 475
Query: 479 LRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTA 538
LRST+VEVIQH DEDIYDDIK+VLYTDSAVAGEAAGISMGLL+VGTA
Sbjct: 476 LRSTSVEVIQHGACLGLGLAALGTADEDIYDDIKSVLYTDSAVAGEAAGISMGLLLVGTA 535
Query: 539 SEKAGEMLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMYA 598
++KA EML YAHETQHEKIIRGLALGIALTVYGREE ADTLIEQMTRDQDPI+RYGGMYA
Sbjct: 536 TDKASEMLAYAHETQHEKIIRGLALGIALTVYGREEGADTLIEQMTRDQDPIIRYGGMYA 595
Query: 599 LALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESYN 658
LALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYS+PEQTPRIVSLLSESYN
Sbjct: 596 LALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSDPEQTPRIVSLLSESYN 655
Query: 659 PHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDSR 718
PHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQI+EA+DSR
Sbjct: 656 PHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQISEASDSR 715
Query: 719 VGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLSV 778
VG FRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDK+TAV+GL+V
Sbjct: 716 VGAFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKVTAVIGLTV 775
Query: 779 FSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTVPTTTSA 838
FSQFWYWYPLIYFISL+FSPTA IGLNYDLKVP+FEF+SHAKPSLFEYPKPTTV T +A
Sbjct: 776 FSQFWYWYPLIYFISLAFSPTAFIGLNYDLKVPKFEFMSHAKPSLFEYPKPTTVATANTA 835
Query: 839 VKLPAAVLSTSXXXXXXXXXXXXXXXXXXXXXXXTDLSSAGKGKS-SNEKDGDSMQVDXX 897
KLP AVLSTS + AGK + S+EK+ +SMQVD
Sbjct: 836 AKLPTAVLSTSAKAKAKAKKEAEQKAKAENSG-----NEAGKANAASDEKEAESMQVDST 890
Query: 898 XXXXXXXX---XSFEILINPARVVPAQEKFIKFLEDSRYVPVKSAPSGFVLLRDLRPNEP 954
+FEIL+NPARVVP+QEK+IK +EDSRYVP+K APSGFVLLRDLRP+EP
Sbjct: 891 ATTVEKKVEPEATFEILVNPARVVPSQEKYIKLMEDSRYVPMKLAPSGFVLLRDLRPHEP 950
Query: 955 EVLSLTDXXXXXXX---XXXXXXXXXXXXXXXXMAVDEEPQPPAPFEYTS 1001
EVLSLTD MA+D+EPQPP FEY S
Sbjct: 951 EVLSLTDAPTSTASPAVGAEAAGQAQQAATTSAMAIDDEPQPPQAFEYAS 1000
>ZFIN|ZDB-GENE-040426-810 [details] [associations]
symbol:psmd1 "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 1" species:7955 "Danio rerio" [GO:0000502
"proteasome complex" evidence=IEA] [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
ZFIN:ZDB-GENE-040426-810 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 GeneTree:ENSGT00550000074915 Pfam:PF01851
EMBL:BX571973 EMBL:CABZ01044354 IPI:IPI00506005
Ensembl:ENSDART00000144100 ArrayExpress:F1QY43 Uniprot:F1QY43
Length = 959
Score = 2132 (755.6 bits), Expect = 2.1e-226, Sum P(2) = 2.1e-226
Identities = 449/956 (46%), Positives = 612/956 (64%)
Query: 11 GLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPII--LYEDEEFDQHQRQLAALLV 68
G++++L+E P LK AL LNS V+ FW EIS SV I LYEDE F R+ AAL+
Sbjct: 2 GIISLLDEDEPQLKEFALHKLNSVVNDFWAEISESVGKIEVLYEDETF--RSREFAALVA 59
Query: 69 SKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAE--SNDEA 126
SKVFY+LG ++SLSYALGAG LF+V++DS+YV T++AK ID Y + + AE +E
Sbjct: 60 SKVFYHLGAFDESLSYALGAGDLFNVNDDSEYVETIIAKCIDHYTKQRVENAELPEEEEK 119
Query: 127 ANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLSYCINV 186
++DPRLE IV +M +C+ D KY+QA+GIA+E RRLD E+ I S+++ G L+Y + +
Sbjct: 120 KDIDPRLEGIVNKMFQRCLGDHKYKQAIGIALETRRLDIFEKTILESNDIGGLLAYSLKI 179
Query: 187 SHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLRSENKD 246
S + L PD++++CQCL+FLD+P+ V ILEKL++ +N
Sbjct: 180 CMSLMQNKKFRNEVLRVLVKLYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKEDN-- 237
Query: 247 DALLAFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDP---PSAQNDSSTAE 303
L+A+QI FDL E+ Q FL +V +L T P+ V PGS + P+ DS + E
Sbjct: 238 -LLMAYQICFDLYESASQQFLSSVIQNLRTVGT-PIPAV-PGSTNTGTVPTPDKDSDSME 294
Query: 304 DVQMNEGTPASNVNVQDEDPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKSDLLIL 363
+PA ++PK+ + IK ILSGE +I+L LQFL +N +DL+IL
Sbjct: 295 TEDKAGSSPAGKTADAKDEPKD----QNSKMIK-ILSGEMAIELHLQFLIRNNNTDLMIL 349
Query: 364 KTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATAGLGVI 423
K K +V RNSVCH+AT+ AN+ MH GTT D FLRENL+WL+RATNWAKF+ATA LGVI
Sbjct: 350 KNTKDAV--RNSVCHTATVIANSFMHTGTTSDQFLRENLEWLARATNWAKFTATASLGVI 407
Query: 424 HRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDSLRSTN 483
H+GH ++ LMA YALGLIHANHG I +L L++ +
Sbjct: 408 HKGHEKEALQLMA--TYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLSQLKNAS 465
Query: 484 VEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEKAG 543
++++H +D+YD +K+ LY D AV GEAAG+++GL+M+G+ S +A
Sbjct: 466 NDIVRHGGALGLGLAALGTARQDVYDLLKSNLYQDDAVTGEAAGLALGLVMLGSKSAQAI 525
Query: 544 E-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMYALALA 602
E M+ YA ETQHEKI+RGLA+GIA+ +YGR EEAD LIE + RD+DPILR GMY +A+A
Sbjct: 526 EDMVGYAQETQHEKILRGLAVGIAMVMYGRMEEADALIESLCRDKDPILRRSGMYTVAMA 585
Query: 603 YSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESYNPHVR 662
Y G+ NNKAIR+LLH AVSDV+DDVRR AV ++GF+++ PEQ P +VSLLSESYNPHVR
Sbjct: 586 YCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESIGFIMFRTPEQCPSVVSLLSESYNPHVR 645
Query: 663 YGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDSRVGTF 722
YGAA+A+GI CAGTG EAI+LLEP+T+D V++VRQGALIA A++M+Q E +V F
Sbjct: 646 YGAAMALGICCAGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEVTCPKVNQF 705
Query: 723 RRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLSVFSQF 782
R+ K+I DKH+D M+K GAILA G+LDAGGRNVTI L S+T H + +VVGL VF+QF
Sbjct: 706 RQLYSKVINDKHDDVMAKFGAILAQGVLDAGGRNVTISLQSRTGHTHMPSVVGLLVFTQF 765
Query: 783 WYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTVPTTTSAVKLP 842
W+W+PL +F+SL+F+PTA+IGLN DLK+P+ ++ S+ KPS F YP P VP K+
Sbjct: 766 WFWFPLSHFLSLAFTPTAIIGLNKDLKMPKVQYRSNCKPSTFAYPPPLEVPKEKEKEKVS 825
Query: 843 AAVLSTSXXXXXXXXXXXXXXXXXXXXXXXTDLSSAGKGKSSNEKDGDSMQVDXXXXXXX 902
AVLS + + A K K EK+ + +
Sbjct: 826 TAVLSITAKAKKKEKEKKEKEEEKMEVETQAE---AEKEKKDEEKEKEKEK-------KK 875
Query: 903 XXXXSFEILINPARVVPAQEKFIKFLEDSRYVPVKSAPSG-FVLLRDLRPNEPEVL 957
+F+++ NPAR +PAQ K + + RY P K +G ++L+D E E++
Sbjct: 876 EPEPNFQMMENPARALPAQLKVLTMPDSCRYQPFKPLHTGGIIILKDTSEEEEELV 931
Score = 76 (31.8 bits), Expect = 2.1e-226, Sum P(2) = 2.1e-226
Identities = 24/93 (25%), Positives = 40/93 (43%)
Query: 907 SFEILINPARVVPAQEKFIKFLEDSRYVPVKSAPSGFVLLRDLRPNEPEVLSLTDXXXXX 966
+F+++ NPAR +PAQ K + + RY P K +G +++ L+ E L +
Sbjct: 880 NFQMMENPARALPAQLKVLTMPDSCRYQPFKPLHTGGIII--LKDTSEEEEELVEPVSAH 937
Query: 967 XXXXXXXXXXXXXXXXXXMAVDEEPQPPAPFEY 999
++EP+ P PFEY
Sbjct: 938 GPKIEEE--------------EQEPEAPEPFEY 956
>UNIPROTKB|G3V8B6 [details] [associations]
symbol:Psmd1 "26S proteasome non-ATPase regulatory subunit
1" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 RGD:621669 INTERPRO:IPR002015 GO:GO:0030234
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 GeneTree:ENSGT00550000074915
OMA:CVENAEL Pfam:PF01851 UniGene:Rn.2891 EMBL:CH474004
Ensembl:ENSRNOT00000024306 Uniprot:G3V8B6
Length = 953
Score = 2060 (730.2 bits), Expect = 1.5e-221, Sum P(2) = 1.5e-221
Identities = 424/850 (49%), Positives = 571/850 (67%)
Query: 5 MVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPII--LYEDEEFDQHQRQ 62
M++SA G++++L+E P LK AL LN+ V+ FW EIS SV I LYEDE F RQ
Sbjct: 1 MITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQ 58
Query: 63 LAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAES 122
AAL+ SKVFY+LG +SL+YALGAG LF+V+++S+YV T++AK ID Y + A+
Sbjct: 59 FAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADL 118
Query: 123 ND-EAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLS 181
+ E +D RLE IV +M +C+ D KY+QA+GIA+E RRLD E+ I S++V G L+
Sbjct: 119 PEGEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLA 178
Query: 182 YCINVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLR 241
Y + + S + L PD++++CQCL+FLD+P+ V ILEKL++
Sbjct: 179 YSLKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVK 238
Query: 242 SENKDDALLAFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDP---PSAQND 298
+N L+A+QI FDL E+ Q FL +V +L T P+ +V PGS + P + D
Sbjct: 239 EDN---LLMAYQICFDLYESASQQFLSSVIQNLRTVGT-PIASV-PGSTNTGTVPGPEKD 293
Query: 299 SSTAEDVQMNEGTPASNVNVQDEDPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKS 358
S + E + G A +PK+ + L IK ILSGE +I+L LQFL +N +
Sbjct: 294 SDSMETEEKTAGAVAGKTPDASPEPKD----QTLKMIK-ILSGEMAIELHLQFLIRNNNT 348
Query: 359 DLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATA 418
DL+ILK K +V RNSVCH+AT+ AN+ MH GTT D FLR+NL+WL+RATNWAKF+ATA
Sbjct: 349 DLMILKNTKDAV--RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATA 406
Query: 419 GLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDS 478
LGVIH+GH ++ LMA YALGLIHANHG I +L +
Sbjct: 407 SLGVIHKGHEKEALQLMA--TYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQ 464
Query: 479 LRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTA 538
L++ + ++++H +D+YD +K LY D AV GEAAG+++GL+M+G+
Sbjct: 465 LKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSK 524
Query: 539 SEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMY 597
+ +A E M+ YA ETQHEKI+RGLA+GIAL +YGR EEAD LIE + RD+DPILR GMY
Sbjct: 525 NAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMY 584
Query: 598 ALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESY 657
+A+AY G+ NNKAIR+LLH AVSDV+DDVRR AV +LGF+L+ PEQ P +VSLLSESY
Sbjct: 585 TVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESY 644
Query: 658 NPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDS 717
NPHVRYGAA+A+G+ CAGTG EAI+LLEP+T+D V++VRQGALIA A++M+Q E
Sbjct: 645 NPHVRYGAAMALGVCCAGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCP 704
Query: 718 RVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLS 777
+V FR+ K+I DKH+D M+K GAILA GILDAGG NVTI L S+T H + +VVG+
Sbjct: 705 KVNQFRQLYSKVINDKHDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVL 764
Query: 778 VFSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTVPTTTS 837
VF+QFW+W+PL +F+SL+++PT +IGLN DLK+P+ ++ S+ KPS F YP P VP
Sbjct: 765 VFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKE 824
Query: 838 AVKLPAAVLS 847
K+ AVLS
Sbjct: 825 KEKVSTAVLS 834
Score = 102 (41.0 bits), Expect = 1.5e-221, Sum P(2) = 1.5e-221
Identities = 33/125 (26%), Positives = 52/125 (41%)
Query: 880 KGKSSNEKDGDSMQVDXXXXXXXXXXX-----SFEILINPARVVPAQEKFIKFLEDSRYV 934
K K +K+ + M+VD +F++L NPARV+PAQ K + E RY
Sbjct: 842 KEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNFQLLDNPARVMPAQLKVLSMTETCRYQ 901
Query: 935 PVKSAPSGFVLLRDLRPNEPEVLSLTDXXXXXXXXXXXXXXXXXXXXXXXMAVDEEPQPP 994
P K G +++ L+ ++ L + ++EP+PP
Sbjct: 902 PFKPLSIGGIII--LKDTSEDIEELVEPVAAHGPKIEEE--------------EQEPEPP 945
Query: 995 APFEY 999
PFEY
Sbjct: 946 EPFEY 950
>UNIPROTKB|E1C5P3 [details] [associations]
symbol:PSMD1 "26S proteasome non-ATPase regulatory subunit
1" species:9031 "Gallus gallus" [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GeneTree:ENSGT00550000074915 OMA:CVENAEL Pfam:PF01851
EMBL:AADN02020638 IPI:IPI00579067 Ensembl:ENSGALT00000012418
ArrayExpress:E1C5P3 Uniprot:E1C5P3
Length = 958
Score = 2061 (730.6 bits), Expect = 2.0e-221, Sum P(2) = 2.0e-221
Identities = 426/853 (49%), Positives = 577/853 (67%)
Query: 5 MVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPII--LYEDEEFDQHQRQ 62
M++SA G++++L+E P LK AL LN+ V+ FW EIS SV I LYEDE F RQ
Sbjct: 1 MITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQ 58
Query: 63 LAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAES 122
AAL+ SKVFY+LG +SL+YALGAG LF+V+++S+YV T++AK ID Y + AE
Sbjct: 59 FAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENAEL 118
Query: 123 ND-EAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLS 181
+ E VD RLE IV +M +C+ D KY+QA+GIA+E RRLD E+ I S++V G L+
Sbjct: 119 PEGEKKPVDERLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDIFEKTILESNDVPGMLA 178
Query: 182 YCINVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLR 241
Y + + S + L PD++++CQCL+FLD+P+ V ILEKL++
Sbjct: 179 YSLKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVK 238
Query: 242 SENKDDALLAFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDP---PSAQND 298
+N L+A+QI FDL E+ Q FL +V +L T P+ +V PGS + P ++ D
Sbjct: 239 EDN---LLMAYQICFDLYESASQQFLSSVIQNLRTVGT-PIASV-PGSTNTGTVPGSEKD 293
Query: 299 SSTAEDVQMNEGT---PASNVNVQDEDPKEVIYAERLNKIKGILSGETSIQLTLQFLYSH 355
S E + T ++ + V++ +PK+ +++K+ ILSGE +I+L LQFL +
Sbjct: 294 SDAMEAEEKPGSTCVGKSAEIYVKNPEPKD-----QISKMIKILSGEMAIELHLQFLIRN 348
Query: 356 NKSDLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFS 415
N +DL+ILK K +V RNSVCH+AT+ AN+ MH GTT D FLR+NL+WL+RATNWAKF+
Sbjct: 349 NNTDLMILKNTKDAV--RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFT 406
Query: 416 ATAGLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFL 475
ATA LGVIH+GH ++ LMA YALGLIHANHG I +L
Sbjct: 407 ATASLGVIHKGHEKEALQLMA--TYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYL 464
Query: 476 RDSLRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMV 535
+ L++ + ++++H +D+YD +K LY D AV GEAAG+++GL+M+
Sbjct: 465 LNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVML 524
Query: 536 GTASEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYG 594
G+ + +A E M+ YA ETQHEKI+RGLA+GIAL +YGR EEAD LIE + RD+DPILR
Sbjct: 525 GSKNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRS 584
Query: 595 GMYALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLS 654
GMY +A+AY G+ NNKAIR+LLH AVSDV+DDVRR AV +LGF+L+ PEQ P +VSLLS
Sbjct: 585 GMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLS 644
Query: 655 ESYNPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEA 714
ESYNPHVRYGAA+A+GI CAGTG EAI+LLEP+T+D V++VRQGALIA A++M+Q E
Sbjct: 645 ESYNPHVRYGAAMALGICCAGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEI 704
Query: 715 NDSRVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVV 774
+V FR+ K+I DKH+D M+K GAILA GILDAGG NVTI L S+T H + +VV
Sbjct: 705 TCPKVSQFRQLYSKVINDKHDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVV 764
Query: 775 GLSVFSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTVPT 834
G+ VF+QFW+W+PL +F+SL+F+PT +IGLN DLK+P+ ++ S+ KPS F YP P VP
Sbjct: 765 GVLVFTQFWFWFPLSHFLSLAFTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYPPPLEVPK 824
Query: 835 TTSAVKLPAAVLS 847
K+ AVLS
Sbjct: 825 EKEKEKVSTAVLS 837
Score = 100 (40.3 bits), Expect = 2.0e-221, Sum P(2) = 2.0e-221
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 880 KGKSSNEKDGDSMQVDXXXXXXXXXXX-----SFEILINPARVVPAQEKFIKFLEDSRYV 934
K K +K+ + M+VD +F++L NPARV+PAQ K + E RY
Sbjct: 847 KEKEKEKKEEEKMEVDETEKKDEKEKKKEPEPNFQLLDNPARVMPAQLKVLTMTESCRYQ 906
Query: 935 PVKSAP-SGFVLLRDLRPNEPEVL 957
P K G ++L+D + E++
Sbjct: 907 PFKPLSIGGIIILKDTSEDMEELV 930
>MGI|MGI:1917497 [details] [associations]
symbol:Psmd1 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 1" species:10090 "Mus musculus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
MGI:MGI:1917497 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790 GO:GO:0042176
GO:GO:0022624 eggNOG:COG5116 GeneTree:ENSGT00550000074915
HOGENOM:HOG000189403 KO:K03032 OMA:CVENAEL Pfam:PF01851 CTD:5707
HOVERGEN:HBG007543 OrthoDB:EOG4X97GG EMBL:AK153386 EMBL:AK159123
EMBL:BC138526 EMBL:BC138527 IPI:IPI00267295 RefSeq:NP_081633.1
UniGene:Mm.280013 ProteinModelPortal:Q3TXS7 SMR:Q3TXS7
IntAct:Q3TXS7 STRING:Q3TXS7 PhosphoSite:Q3TXS7 PaxDb:Q3TXS7
PRIDE:Q3TXS7 Ensembl:ENSMUST00000027432 GeneID:70247 KEGG:mmu:70247
UCSC:uc007buy.1 InParanoid:B2RRP8 NextBio:331246 Bgee:Q3TXS7
Genevestigator:Q3TXS7 Uniprot:Q3TXS7
Length = 953
Score = 2055 (728.5 bits), Expect = 4.1e-221, Sum P(2) = 4.1e-221
Identities = 424/850 (49%), Positives = 570/850 (67%)
Query: 5 MVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPII--LYEDEEFDQHQRQ 62
M++SA G++++L+E P LK AL LN+ V+ FW EIS SV I LYEDE F RQ
Sbjct: 1 MITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQ 58
Query: 63 LAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAES 122
AAL+ SKVFY+LG +SL+YALGAG LF+V+++S+YV T++AK ID Y + A+
Sbjct: 59 FAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADL 118
Query: 123 ND-EAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLS 181
+ E +D RLE IV +M +C+ D KY+QA+GIA+E RRLD E+ I S++V G L+
Sbjct: 119 PEGEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLA 178
Query: 182 YCINVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLR 241
Y + + S + L PD++++CQCL+FLD+P+ V ILEKL++
Sbjct: 179 YSLKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVK 238
Query: 242 SENKDDALLAFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDP---PSAQND 298
+N L+A+QI FDL E+ Q FL +V +L T P+ +V PGS + P ++ D
Sbjct: 239 EDN---LLMAYQICFDLYESASQQFLSSVIQNLRTVGT-PIASV-PGSTNTGTVPGSEKD 293
Query: 299 SSTAEDVQMNEGTPASNVNVQDEDPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKS 358
S E + A +PK+ + L IK ILSGE +I+L LQFL +N +
Sbjct: 294 SDPMETEEKTASAVAGKTPDASPEPKD----QTLKMIK-ILSGEMAIELHLQFLIRNNNT 348
Query: 359 DLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATA 418
DL+ILK K +V RNSVCH+AT+ AN+ MH GTT D FLR+NL+WL+RATNWAKF+ATA
Sbjct: 349 DLMILKNTKDAV--RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATA 406
Query: 419 GLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDS 478
LGVIH+GH ++ LMA YALGLIHANHG I +L +
Sbjct: 407 SLGVIHKGHEKEALQLMA--TYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQ 464
Query: 479 LRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTA 538
L++ + ++++H +D+YD +K LY D AV GEAAG+++GL+M+G+
Sbjct: 465 LKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSK 524
Query: 539 SEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMY 597
+ +A E M+ YA ETQHEKI+RGLA+GIAL +YGR EEAD LIE + RD+DPILR GMY
Sbjct: 525 NAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMY 584
Query: 598 ALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESY 657
+A+AY G+ NNKAIR+LLH AVSDV+DDVRR AV +LGF+L+ PEQ P +VSLLSESY
Sbjct: 585 TVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESY 644
Query: 658 NPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDS 717
NPHVRYGAA+A+GI CAGTG EAI+LLEP+T+D V++VRQGALIA A++M+Q E
Sbjct: 645 NPHVRYGAAMALGICCAGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCP 704
Query: 718 RVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLS 777
+V FR+ K+I DKH+D M+K GAILA GILDAGG NVTI L S+T H + +VVG+
Sbjct: 705 KVNQFRQLYSKVINDKHDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVL 764
Query: 778 VFSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTVPTTTS 837
VF+QFW+W+PL +F+SL+++PT +IGLN DLK+P+ ++ S+ KPS F YP P VP
Sbjct: 765 VFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKE 824
Query: 838 AVKLPAAVLS 847
K+ AVLS
Sbjct: 825 KEKVSTAVLS 834
Score = 103 (41.3 bits), Expect = 4.1e-221, Sum P(2) = 4.1e-221
Identities = 34/125 (27%), Positives = 52/125 (41%)
Query: 880 KGKSSNEKDGDSMQVDXXXXXXXXXXX-----SFEILINPARVVPAQEKFIKFLEDSRYV 934
K K +K+ + M+VD +F++L NPARV+PAQ K + E RY
Sbjct: 842 KEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNFQLLDNPARVMPAQLKVLSMTETCRYQ 901
Query: 935 PVKSAPSGFVLLRDLRPNEPEVLSLTDXXXXXXXXXXXXXXXXXXXXXXXMAVDEEPQPP 994
P K G +++ L+ +V L + ++EP+PP
Sbjct: 902 PFKPLSIGGIII--LKDTSEDVEELVEPVAAHGPKIEEE--------------EQEPEPP 945
Query: 995 APFEY 999
PFEY
Sbjct: 946 EPFEY 950
>UNIPROTKB|A7MBA2 [details] [associations]
symbol:PSMD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0050790 GO:GO:0000502 GO:GO:0042176 eggNOG:COG5116
GeneTree:ENSGT00550000074915 HOGENOM:HOG000189403 KO:K03032
OMA:CVENAEL Pfam:PF01851 CTD:5707 HOVERGEN:HBG007543
OrthoDB:EOG4X97GG EMBL:DAAA02006191 EMBL:BC151445 IPI:IPI00714855
RefSeq:NP_001094547.1 UniGene:Bt.27989 STRING:A7MBA2
Ensembl:ENSBTAT00000006754 GeneID:511803 KEGG:bta:511803
InParanoid:A7MBA2 NextBio:20870109 Uniprot:A7MBA2
Length = 953
Score = 2050 (726.7 bits), Expect = 5.2e-221, Sum P(2) = 5.2e-221
Identities = 424/850 (49%), Positives = 572/850 (67%)
Query: 5 MVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPII--LYEDEEFDQHQRQ 62
M++SA G++++L+E P LK AL LN+ V+ FW EIS SV I LYEDE F RQ
Sbjct: 1 MITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQ 58
Query: 63 LAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAES 122
AAL+ SKVFY+LG +SL+YALGAG LF+V+++S+YV T++AK ID Y + A+
Sbjct: 59 FAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADL 118
Query: 123 ND-EAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLS 181
+ E +D RLE IV +M +C+ D KY+QA+GIA+E RRLD E+ I S++V G L+
Sbjct: 119 PEGEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLA 178
Query: 182 YCINVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLR 241
Y + + S + L PD++++CQCL+FLD+P+ V ILEKL++
Sbjct: 179 YSLKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVK 238
Query: 242 SENKDDALLAFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDPPSAQNDSST 301
+N L+A+QI FDL E+ Q FL +V +L T PL +V PGS + +
Sbjct: 239 EDN---LLMAYQICFDLYESASQQFLSSVIQNLRTVGT-PLASV-PGSTNTGTVPGSERE 293
Query: 302 AEDVQMNEGTPASNVNVQDE---DPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKS 358
++ ++ E T + V E +PK+ + L IK ILSGE +I+L LQFL +N +
Sbjct: 294 SDSMETEEKTGSVLVGKTPEVSPEPKD----QTLKMIK-ILSGEMAIELHLQFLIRNNNT 348
Query: 359 DLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATA 418
DL+ILK K +V RNSVCH+AT+ AN+ MH GTT D FLR+NL+WL+RATNWAKF+ATA
Sbjct: 349 DLMILKNTKDAV--RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATA 406
Query: 419 GLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDS 478
LGVIH+GH ++ LMA YALGLIHANHG I +L +
Sbjct: 407 SLGVIHKGHEKEALQLMA--TYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQ 464
Query: 479 LRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTA 538
L++ + ++++H +D+YD +K LY D AV GEAAG+++GL+M+G+
Sbjct: 465 LKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSK 524
Query: 539 SEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMY 597
+ +A E M+ YA ETQHEKI+RGLA+GIAL +YGR EEAD LIE + RD+DPILR GMY
Sbjct: 525 NAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMY 584
Query: 598 ALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESY 657
+A+AY G+ NNKAIR+LLH AVSDV+DDVRR AV +LGF+L+ PEQ P +VSLLSESY
Sbjct: 585 TVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESY 644
Query: 658 NPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDS 717
NPHVRYGAA+A+GI CAGTG EAI+LLEP+T+D V++VRQGALIA A++M+Q E
Sbjct: 645 NPHVRYGAAMALGICCAGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCP 704
Query: 718 RVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLS 777
+V FR+ K+I DKH+D M+K GAILA GILDAGG NVTI L S+T H + +VVG+
Sbjct: 705 KVNQFRQLYSKVINDKHDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVL 764
Query: 778 VFSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTVPTTTS 837
VF+QFW+W+PL +F+SL+++PT +IGLN DLK+P+ ++ S+ KPS F YP P VP
Sbjct: 765 VFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKE 824
Query: 838 AVKLPAAVLS 847
K+ AVLS
Sbjct: 825 KEKVSTAVLS 834
Score = 107 (42.7 bits), Expect = 5.2e-221, Sum P(2) = 5.2e-221
Identities = 34/125 (27%), Positives = 53/125 (42%)
Query: 880 KGKSSNEKDGDSMQVDXXXXXXXXXXX-----SFEILINPARVVPAQEKFIKFLEDSRYV 934
K K +K+ + M+VD +F++L NPARV+PAQ K + LE RY
Sbjct: 842 KEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNFQLLDNPARVMPAQLKVLSMLETCRYQ 901
Query: 935 PVKSAPSGFVLLRDLRPNEPEVLSLTDXXXXXXXXXXXXXXXXXXXXXXXMAVDEEPQPP 994
P K G +++ L+ ++ L + ++EP+PP
Sbjct: 902 PFKPLSIGGIII--LKDTSEDIEELVEPVAAHGPKIEEE--------------EQEPEPP 945
Query: 995 APFEY 999
PFEY
Sbjct: 946 EPFEY 950
>UNIPROTKB|F1NUT6 [details] [associations]
symbol:PSMD1 "26S proteasome non-ATPase regulatory subunit
1" species:9031 "Gallus gallus" [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GeneTree:ENSGT00550000074915 Pfam:PF01851 IPI:IPI00598268
EMBL:AADN02020638 Ensembl:ENSGALT00000012419 ArrayExpress:F1NUT6
Uniprot:F1NUT6
Length = 955
Score = 2055 (728.5 bits), Expect = 8.5e-221, Sum P(2) = 8.5e-221
Identities = 425/850 (50%), Positives = 572/850 (67%)
Query: 5 MVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPII--LYEDEEFDQHQRQ 62
M++SA G++++L+E P LK AL LN+ V+ FW EIS SV I LYEDE F RQ
Sbjct: 1 MITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQ 58
Query: 63 LAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAES 122
AAL+ SKVFY+LG +SL+YALGAG LF+V+++S+YV T++AK ID Y + AE
Sbjct: 59 FAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENAEL 118
Query: 123 ND-EAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLS 181
+ E VD RLE IV +M +C+ D KY+QA+GIA+E RRLD E+ I S++V G L+
Sbjct: 119 PEGEKKPVDERLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDIFEKTILESNDVPGMLA 178
Query: 182 YCINVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLR 241
Y + + S + L PD++++CQCL+FLD+P+ V ILEKL++
Sbjct: 179 YSLKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVK 238
Query: 242 SENKDDALLAFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDP---PSAQND 298
+N L+A+QI FDL E+ Q FL +V +L T P+ +V PGS + P ++ D
Sbjct: 239 EDN---LLMAYQICFDLYESASQQFLSSVIQNLRTVGT-PIASV-PGSTNTGTVPGSEKD 293
Query: 299 SSTAEDVQMNEGTPASNVNVQDEDPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKS 358
S E + T + +PK+ +++K+ ILSGE +I+L LQFL +N +
Sbjct: 294 SDAMEAEEKPGSTCVGKSAEINPEPKD-----QISKMIKILSGEMAIELHLQFLIRNNNT 348
Query: 359 DLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATA 418
DL+ILK K +V RNSVCH+AT+ AN+ MH GTT D FLR+NL+WL+RATNWAKF+ATA
Sbjct: 349 DLMILKNTKDAV--RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATA 406
Query: 419 GLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDS 478
LGVIH+GH ++ LMA YALGLIHANHG I +L +
Sbjct: 407 SLGVIHKGHEKEALQLMA--TYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQ 464
Query: 479 LRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTA 538
L++ + ++++H +D+YD +K LY D AV GEAAG+++GL+M+G+
Sbjct: 465 LKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSK 524
Query: 539 SEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMY 597
+ +A E M+ YA ETQHEKI+RGLA+GIAL +YGR EEAD LIE + RD+DPILR GMY
Sbjct: 525 NAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMY 584
Query: 598 ALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESY 657
+A+AY G+ NNKAIR+LLH AVSDV+DDVRR AV +LGF+L+ PEQ P +VSLLSESY
Sbjct: 585 TVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESY 644
Query: 658 NPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDS 717
NPHVRYGAA+A+GI CAGTG EAI+LLEP+T+D V++VRQGALIA A++M+Q E
Sbjct: 645 NPHVRYGAAMALGICCAGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCP 704
Query: 718 RVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLS 777
+V FR+ K+I DKH+D M+K GAILA GILDAGG NVTI L S+T H + +VVG+
Sbjct: 705 KVSQFRQLYSKVINDKHDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVL 764
Query: 778 VFSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTVPTTTS 837
VF+QFW+W+PL +F+SL+F+PT +IGLN DLK+P+ ++ S+ KPS F YP P VP
Sbjct: 765 VFTQFWFWFPLSHFLSLAFTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYPPPLEVPKEKE 824
Query: 838 AVKLPAAVLS 847
K+ AVLS
Sbjct: 825 KEKVSTAVLS 834
Score = 100 (40.3 bits), Expect = 8.5e-221, Sum P(2) = 8.5e-221
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 880 KGKSSNEKDGDSMQVDXXXXXXXXXXX-----SFEILINPARVVPAQEKFIKFLEDSRYV 934
K K +K+ + M+VD +F++L NPARV+PAQ K + E RY
Sbjct: 844 KEKEKEKKEEEKMEVDETEKKDEKEKKKEPEPNFQLLDNPARVMPAQLKVLTMTESCRYQ 903
Query: 935 PVKSAP-SGFVLLRDLRPNEPEVL 957
P K G ++L+D + E++
Sbjct: 904 PFKPLSIGGIIILKDTSEDMEELV 927
>RGD|621669 [details] [associations]
symbol:Psmd1 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 1" species:10116 "Rattus norvegicus" [GO:0022624
"proteasome accessory complex" evidence=ISO;ISS] [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0042176 "regulation
of protein catabolic process" evidence=IEA] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 RGD:621669 INTERPRO:IPR002015
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0050790 GO:GO:0042176 GO:GO:0022624 eggNOG:COG5116
HOGENOM:HOG000189403 KO:K03032 Pfam:PF01851 CTD:5707
HOVERGEN:HBG007543 OrthoDB:EOG4X97GG EMBL:AJ006340 IPI:IPI00212512
RefSeq:NP_114184.1 UniGene:Rn.2891 ProteinModelPortal:O88761
IntAct:O88761 STRING:O88761 PhosphoSite:O88761 PRIDE:O88761
GeneID:83806 KEGG:rno:83806 UCSC:RGD:621669 InParanoid:O88761
NextBio:616403 ArrayExpress:O88761 Genevestigator:O88761
GermOnline:ENSRNOG00000017730 Uniprot:O88761
Length = 953
Score = 2053 (727.8 bits), Expect = 8.5e-221, Sum P(2) = 8.5e-221
Identities = 423/850 (49%), Positives = 570/850 (67%)
Query: 5 MVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPII--LYEDEEFDQHQRQ 62
M++SA G++++L+E P LK AL LN+ V+ FW EIS SV I LYEDE F RQ
Sbjct: 1 MITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQ 58
Query: 63 LAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAES 122
AAL+ SKVFY+LG +SL+YALGAG LF+V+++S+YV T++AK ID Y + A+
Sbjct: 59 FAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADL 118
Query: 123 ND-EAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLS 181
+ E +D RLE IV +M +C+ D KY+QA+GIA+E RRLD E+ I S++V G L+
Sbjct: 119 PEGEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLA 178
Query: 182 YCINVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLR 241
Y + + S + L PD++++CQCL+FLD+ + V ILEKL++
Sbjct: 179 YSLKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDTQAVSDILEKLVK 238
Query: 242 SENKDDALLAFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDP---PSAQND 298
+N L+A+QI FDL E+ Q FL +V +L T P+ +V PGS + P + D
Sbjct: 239 EDN---LLMAYQICFDLYESASQQFLSSVIQNLRTVGT-PIASV-PGSTNTGTVPGPEKD 293
Query: 299 SSTAEDVQMNEGTPASNVNVQDEDPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKS 358
S + E + G A +PK+ + L IK ILSGE +I+L LQFL +N +
Sbjct: 294 SDSMETEEKTAGAVAGKTPDASPEPKD----QTLKMIK-ILSGEMAIELHLQFLIRNNNT 348
Query: 359 DLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATA 418
DL+ILK K +V RNSVCH+AT+ AN+ MH GTT D FLR+NL+WL+RATNWAKF+ATA
Sbjct: 349 DLMILKNTKDAV--RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATA 406
Query: 419 GLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDS 478
LGVIH+GH ++ LMA YALGLIHANHG I +L +
Sbjct: 407 SLGVIHKGHEKEALQLMA--TYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQ 464
Query: 479 LRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTA 538
L++ + ++++H +D+YD +K LY D AV GEAAG+++GL+M+G+
Sbjct: 465 LKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSK 524
Query: 539 SEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMY 597
+ +A E M+ YA ETQHEKI+RGLA+GIAL +YGR EEAD LIE + RD+DPILR GMY
Sbjct: 525 NTQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMY 584
Query: 598 ALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESY 657
+A+AY G+ NNKAIR+LLH AVSDV+DDVRR AV +LGF+L+ PEQ P +VSLLSESY
Sbjct: 585 TVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESY 644
Query: 658 NPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDS 717
NPHVRYGAA+A+G+ CAGTG EAI+LLEP+T+D V++VRQGALIA A++M+Q E
Sbjct: 645 NPHVRYGAAMALGVCCAGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCP 704
Query: 718 RVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLS 777
+V FR+ K+I DKH+D M+K GAILA GILDAGG NVTI L S+T H + +VVG+
Sbjct: 705 KVNQFRQLYSKVINDKHDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVL 764
Query: 778 VFSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTVPTTTS 837
VF+QFW+W+PL +F+SL+++PT +IGLN DLK+P+ ++ S+ KPS F YP P VP
Sbjct: 765 VFTQFWFWFPLSHFLSLAYTPTCIIGLNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKE 824
Query: 838 AVKLPAAVLS 847
K+ AVLS
Sbjct: 825 KEKVSTAVLS 834
Score = 102 (41.0 bits), Expect = 8.5e-221, Sum P(2) = 8.5e-221
Identities = 33/125 (26%), Positives = 52/125 (41%)
Query: 880 KGKSSNEKDGDSMQVDXXXXXXXXXXX-----SFEILINPARVVPAQEKFIKFLEDSRYV 934
K K +K+ + M+VD +F++L NPARV+PAQ K + E RY
Sbjct: 842 KEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNFQLLDNPARVMPAQLKVLSMTETCRYQ 901
Query: 935 PVKSAPSGFVLLRDLRPNEPEVLSLTDXXXXXXXXXXXXXXXXXXXXXXXMAVDEEPQPP 994
P K G +++ L+ ++ L + ++EP+PP
Sbjct: 902 PFKPLSIGGIII--LKDTSEDIEELVEPVAAHGPKIEEE--------------EQEPEPP 945
Query: 995 APFEY 999
PFEY
Sbjct: 946 EPFEY 950
>UNIPROTKB|Q99460 [details] [associations]
symbol:PSMD1 "26S proteasome non-ATPase regulatory subunit
1" species:9606 "Homo sapiens" [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0005838 "proteasome regulatory particle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 INTERPRO:IPR002015 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0030234 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
SUPFAM:SSF48371 Reactome:REACT_21300 GO:GO:0006977
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042981 GO:GO:0044281
GO:GO:0000082 EMBL:AC009407 GO:GO:0051436 GO:GO:0000216
GO:GO:0042176 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 Reactome:REACT_383 DrugBank:DB00188
GO:GO:0005838 eggNOG:COG5116 KO:K03032 OMA:CVENAEL Pfam:PF01851
CTD:5707 HOVERGEN:HBG007543 EMBL:D44466 EMBL:BC001053 EMBL:BC014013
EMBL:BC039845 EMBL:BC047897 EMBL:BC064398 EMBL:BC073833
EMBL:BC094720 EMBL:BC112344 EMBL:BC114434 IPI:IPI00299608
IPI:IPI00456695 RefSeq:NP_001177966.1 RefSeq:NP_002798.2
UniGene:Hs.3887 ProteinModelPortal:Q99460 SMR:Q99460 DIP:DIP-27548N
IntAct:Q99460 MINT:MINT-1160606 STRING:Q99460 PhosphoSite:Q99460
DMDM:51704332 PaxDb:Q99460 PRIDE:Q99460 Ensembl:ENST00000308696
Ensembl:ENST00000373635 Ensembl:ENST00000409643 GeneID:5707
KEGG:hsa:5707 UCSC:uc002vrm.2 UCSC:uc002vrn.2 GeneCards:GC02P231921
HGNC:HGNC:9554 HPA:CAB021092 neXtProt:NX_Q99460 PharmGKB:PA33899
InParanoid:Q99460 OrthoDB:EOG4X97GG PhylomeDB:Q99460
ChEMBL:CHEMBL1934 ChiTaRS:PSMD1 GenomeRNAi:5707 NextBio:22174
ArrayExpress:Q99460 Bgee:Q99460 CleanEx:HS_PSMD1
Genevestigator:Q99460 GermOnline:ENSG00000173692 Uniprot:Q99460
Length = 953
Score = 2053 (727.8 bits), Expect = 1.8e-220, Sum P(2) = 1.8e-220
Identities = 423/850 (49%), Positives = 573/850 (67%)
Query: 5 MVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPII--LYEDEEFDQHQRQ 62
M++SA G++++L+E P LK AL LN+ V+ FW EIS SV I LYEDE F RQ
Sbjct: 1 MITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQ 58
Query: 63 LAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAES 122
AAL+ SKVFY+LG +SL+YALGAG LF+V+++S+YV T++AK ID Y + A+
Sbjct: 59 FAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADL 118
Query: 123 ND-EAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLS 181
+ E +D RLE IV +M +C+ D KY+QA+GIA+E RRLD E+ I S++V G L+
Sbjct: 119 PEGEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLA 178
Query: 182 YCINVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLR 241
Y + + S + L PD++++CQCL+FLD+P+ V ILEKL++
Sbjct: 179 YSLKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVK 238
Query: 242 SENKDDALLAFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDPPSAQNDSST 301
+N L+A+QI FDL E+ Q FL +V +L T P+ +V PGS + +
Sbjct: 239 EDN---LLMAYQICFDLYESASQQFLSSVIQNLRTVGT-PIASV-PGSTNTGTVPGSEKD 293
Query: 302 AEDVQMNEGTPASNVNVQDE---DPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKS 358
++ ++ E T ++ V E +PK+ + L IK ILSGE +I+L LQFL +N +
Sbjct: 294 SDSMETEEKTSSAFVGKTPEASPEPKD----QTLKMIK-ILSGEMAIELHLQFLIRNNNT 348
Query: 359 DLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATA 418
DL+ILK K +V RNSVCH+AT+ AN+ MH GTT D FLR+NL+WL+RATNWAKF+ATA
Sbjct: 349 DLMILKNTKDAV--RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATA 406
Query: 419 GLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDS 478
LGVIH+GH ++ LMA YALGLIHANHG I +L +
Sbjct: 407 SLGVIHKGHEKEALQLMA--TYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQ 464
Query: 479 LRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTA 538
L++ + ++++H +D+YD +K LY D AV GEAAG+++GL+M+G+
Sbjct: 465 LKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSK 524
Query: 539 SEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMY 597
+ +A E M+ YA ETQHEKI+RGLA+GIAL +YGR EEAD LIE + RD+DPILR GMY
Sbjct: 525 NAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMY 584
Query: 598 ALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESY 657
+A+AY G+ NNKAIR+LLH AVSDV+DDVRR AV +LGF+L+ PEQ P +VSLLSESY
Sbjct: 585 TVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESY 644
Query: 658 NPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDS 717
NPHVRYGAA+A+GI CAGTG EAI+LLEP+T+D V++VRQGALIA A++M+Q E
Sbjct: 645 NPHVRYGAAMALGICCAGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCP 704
Query: 718 RVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLS 777
+V FR+ K+I DKH+D M+K GAILA GILDAGG NVTI L S+T H + +VVG+
Sbjct: 705 KVNQFRQLYSKVINDKHDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVL 764
Query: 778 VFSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTVPTTTS 837
VF+QFW+W+PL +F+SL+++PT +IGLN DLK+P+ ++ S+ KPS F YP P VP
Sbjct: 765 VFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKE 824
Query: 838 AVKLPAAVLS 847
K+ AVLS
Sbjct: 825 KEKVSTAVLS 834
Score = 99 (39.9 bits), Expect = 1.8e-220, Sum P(2) = 1.8e-220
Identities = 33/125 (26%), Positives = 52/125 (41%)
Query: 880 KGKSSNEKDGDSMQVDXXXXXXXXXXX-----SFEILINPARVVPAQEKFIKFLEDSRYV 934
K K +K+ + M+VD +F++L NPARV+PAQ K + E RY
Sbjct: 842 KEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNFQLLDNPARVMPAQLKVLTMPETCRYQ 901
Query: 935 PVKSAPSGFVLLRDLRPNEPEVLSLTDXXXXXXXXXXXXXXXXXXXXXXXMAVDEEPQPP 994
P K G +++ L+ ++ L + ++EP+PP
Sbjct: 902 PFKPLSIGGIII--LKDTSEDIEELVEPVAAHGPKIEEE--------------EQEPEPP 945
Query: 995 APFEY 999
PFEY
Sbjct: 946 EPFEY 950
>UNIPROTKB|Q5R5S4 [details] [associations]
symbol:PSMD1 "26S proteasome non-ATPase regulatory subunit
1" species:9601 "Pongo abelii" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790 GO:GO:0042176
GO:GO:0022624 GeneTree:ENSGT00550000074915 KO:K03032 OMA:CVENAEL
Pfam:PF01851 CTD:5707 HOVERGEN:HBG007543 OrthoDB:EOG4X97GG
EMBL:CR860782 RefSeq:NP_001126695.1 UniGene:Pab.18654
ProteinModelPortal:Q5R5S4 PRIDE:Q5R5S4 Ensembl:ENSPPYT00000015422
GeneID:100173695 KEGG:pon:100173695 InParanoid:Q5R5S4
Uniprot:Q5R5S4
Length = 953
Score = 2052 (727.4 bits), Expect = 2.2e-220, Sum P(2) = 2.2e-220
Identities = 423/850 (49%), Positives = 573/850 (67%)
Query: 5 MVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPII--LYEDEEFDQHQRQ 62
M++SA G++++L+E P LK AL LN+ V+ FW EIS SV I LYEDE F RQ
Sbjct: 1 MITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQ 58
Query: 63 LAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAES 122
AAL+ SKVFY+LG +SL+YALGAG LF+V+++S+YV T++AK ID Y + A+
Sbjct: 59 FAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADL 118
Query: 123 ND-EAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLS 181
+ E +D RLE IV +M +C+ D KY+QA+GIA+E RRLD E+ I S++V G L+
Sbjct: 119 PEGEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLA 178
Query: 182 YCINVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLR 241
Y + + S + L PD++++CQCL+FLD+P+ V ILEKL++
Sbjct: 179 YSLKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVK 238
Query: 242 SENKDDALLAFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDPPSAQNDSST 301
+N L+A+QI FDL E+ Q FL +V +L T P+ +V PGS + +
Sbjct: 239 EDN---LLMAYQICFDLYESASQQFLSSVIQNLRTVGT-PIASV-PGSTNTGTVPGSEKD 293
Query: 302 AEDVQMNEGTPASNVNVQDE---DPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKS 358
++ ++ E T ++ V E +PK+ + L IK ILSGE +I+L LQFL +N +
Sbjct: 294 SDSMETEEKTGSAFVGKTPEASPEPKD----QTLKMIK-ILSGEMAIELHLQFLIRNNNT 348
Query: 359 DLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATA 418
DL+ILK K +V RNSVCH+AT+ AN+ MH GTT D FLR+NL+WL+RATNWAKF+ATA
Sbjct: 349 DLMILKNTKDAV--RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATA 406
Query: 419 GLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDS 478
LGVIH+GH ++ LMA YALGLIHANHG I +L +
Sbjct: 407 SLGVIHKGHEKEALQLMA--TYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQ 464
Query: 479 LRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTA 538
L++ + ++++H +D+YD +K LY D AV GEAAG+++GL+M+G+
Sbjct: 465 LKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSK 524
Query: 539 SEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMY 597
+ +A E M+ YA ETQHEKI+RGLA+GIAL +YGR EEAD LIE + RD+DPILR GMY
Sbjct: 525 NAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMY 584
Query: 598 ALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESY 657
+A+AY G+ NNKAIR+LLH AVSDV+DDVRR AV +LGF+L+ PEQ P +VSLLSESY
Sbjct: 585 TVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESY 644
Query: 658 NPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDS 717
NPHVRYGAA+A+GI CAGTG EAI+LLEP+T+D V++VRQGALIA A++M+Q E
Sbjct: 645 NPHVRYGAAMALGICCAGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCP 704
Query: 718 RVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLS 777
+V FR+ K+I DKH+D M+K GAILA GILDAGG NVTI L S+T H + +VVG+
Sbjct: 705 KVNQFRQLYSKVINDKHDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVL 764
Query: 778 VFSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTVPTTTS 837
VF+QFW+W+PL +F+SL+++PT +IGLN DLK+P+ ++ S+ KPS F YP P VP
Sbjct: 765 VFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKE 824
Query: 838 AVKLPAAVLS 847
K+ AVLS
Sbjct: 825 KEKVSTAVLS 834
Score = 99 (39.9 bits), Expect = 2.2e-220, Sum P(2) = 2.2e-220
Identities = 33/125 (26%), Positives = 52/125 (41%)
Query: 880 KGKSSNEKDGDSMQVDXXXXXXXXXXX-----SFEILINPARVVPAQEKFIKFLEDSRYV 934
K K +K+ + M+VD +F++L NPARV+PAQ K + E RY
Sbjct: 842 KEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNFQLLDNPARVMPAQLKVLTMPETCRYQ 901
Query: 935 PVKSAPSGFVLLRDLRPNEPEVLSLTDXXXXXXXXXXXXXXXXXXXXXXXMAVDEEPQPP 994
P K G +++ L+ ++ L + ++EP+PP
Sbjct: 902 PFKPLSIGGIII--LKDTSEDIEELVEPVAAHGPKIEEE--------------EQEPEPP 945
Query: 995 APFEY 999
PFEY
Sbjct: 946 EPFEY 950
>UNIPROTKB|F1LRN6 [details] [associations]
symbol:Psmd1 "26S proteasome non-ATPase regulatory subunit
1" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 RGD:621669 INTERPRO:IPR002015 GO:GO:0030234
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 Pfam:PF01851 IPI:IPI00949424
PRIDE:F1LRN6 Ensembl:ENSRNOT00000066613 ArrayExpress:F1LRN6
Uniprot:F1LRN6
Length = 952
Score = 2048 (726.0 bits), Expect = 2.9e-220, Sum P(2) = 2.9e-220
Identities = 422/849 (49%), Positives = 569/849 (67%)
Query: 6 VSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPII--LYEDEEFDQHQRQL 63
++S G++++L+E P LK AL LN+ V+ FW EIS SV I LYEDE F RQ
Sbjct: 1 LTSQAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQF 58
Query: 64 AALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAESN 123
AAL+ SKVFY+LG +SL+YALGAG LF+V+++S+YV T++AK ID Y + A+
Sbjct: 59 AALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLP 118
Query: 124 D-EAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLSY 182
+ E +D RLE IV +M +C+ D KY+QA+GIA+E RRLD E+ I S++V G L+Y
Sbjct: 119 EGEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAY 178
Query: 183 CINVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLRS 242
+ + S + L PD++++CQCL+FLD+P+ V ILEKL++
Sbjct: 179 SLKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKE 238
Query: 243 ENKDDALLAFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDP---PSAQNDS 299
+N L+A+QI FDL E+ Q FL +V +L T P+ +V PGS + P + DS
Sbjct: 239 DN---LLMAYQICFDLYESASQQFLSSVIQNLRTVGT-PIASV-PGSTNTGTVPGPEKDS 293
Query: 300 STAEDVQMNEGTPASNVNVQDEDPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKSD 359
+ E + G A +PK+ + L IK ILSGE +I+L LQFL +N +D
Sbjct: 294 DSMETEEKTAGAVAGKTPDASPEPKD----QTLKMIK-ILSGEMAIELHLQFLIRNNNTD 348
Query: 360 LLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATAG 419
L+ILK K +V RNSVCH+AT+ AN+ MH GTT D FLR+NL+WL+RATNWAKF+ATA
Sbjct: 349 LMILKNTKDAV--RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATAS 406
Query: 420 LGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDSL 479
LGVIH+GH ++ LMA YALGLIHANHG I +L + L
Sbjct: 407 LGVIHKGHEKEALQLMA--TYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQL 464
Query: 480 RSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTAS 539
++ + ++++H +D+YD +K LY D AV GEAAG+++GL+M+G+ +
Sbjct: 465 KNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKN 524
Query: 540 EKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMYA 598
+A E M+ YA ETQHEKI+RGLA+GIAL +YGR EEAD LIE + RD+DPILR GMY
Sbjct: 525 AQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMYT 584
Query: 599 LALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESYN 658
+A+AY G+ NNKAIR+LLH AVSDV+DDVRR AV +LGF+L+ PEQ P +VSLLSESYN
Sbjct: 585 VAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESYN 644
Query: 659 PHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDSR 718
PHVRYGAA+A+G+ CAGTG EAI+LLEP+T+D V++VRQGALIA A++M+Q E +
Sbjct: 645 PHVRYGAAMALGVCCAGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCPK 704
Query: 719 VGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLSV 778
V FR+ K+I DKH+D M+K GAILA GILDAGG NVTI L S+T H + +VVG+ V
Sbjct: 705 VNQFRQLYSKVINDKHDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVLV 764
Query: 779 FSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTVPTTTSA 838
F+QFW+W+PL +F+SL+++PT +IGLN DLK+P+ ++ S+ KPS F YP P VP
Sbjct: 765 FTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEK 824
Query: 839 VKLPAAVLS 847
K+ AVLS
Sbjct: 825 EKVSTAVLS 833
Score = 102 (41.0 bits), Expect = 2.9e-220, Sum P(2) = 2.9e-220
Identities = 33/125 (26%), Positives = 52/125 (41%)
Query: 880 KGKSSNEKDGDSMQVDXXXXXXXXXXX-----SFEILINPARVVPAQEKFIKFLEDSRYV 934
K K +K+ + M+VD +F++L NPARV+PAQ K + E RY
Sbjct: 841 KEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNFQLLDNPARVMPAQLKVLSMTETCRYQ 900
Query: 935 PVKSAPSGFVLLRDLRPNEPEVLSLTDXXXXXXXXXXXXXXXXXXXXXXXMAVDEEPQPP 994
P K G +++ L+ ++ L + ++EP+PP
Sbjct: 901 PFKPLSIGGIII--LKDTSEDIEELVEPVAAHGPKIEEE--------------EQEPEPP 944
Query: 995 APFEY 999
PFEY
Sbjct: 945 EPFEY 949
>UNIPROTKB|Q5F418 [details] [associations]
symbol:PSMD1 "26S proteasome non-ATPase regulatory subunit
1" species:9031 "Gallus gallus" [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790 GO:GO:0042176
GO:GO:0022624 eggNOG:COG5116 HOGENOM:HOG000189403 KO:K03032
Pfam:PF01851 EMBL:AJ851482 IPI:IPI00598268 RefSeq:NP_001012618.1
UniGene:Gga.12538 ProteinModelPortal:Q5F418 STRING:Q5F418
PRIDE:Q5F418 GeneID:424926 KEGG:gga:424926 CTD:5707
HOVERGEN:HBG007543 NextBio:20827189 Uniprot:Q5F418
Length = 955
Score = 2049 (726.3 bits), Expect = 3.6e-220, Sum P(2) = 3.6e-220
Identities = 424/850 (49%), Positives = 571/850 (67%)
Query: 5 MVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPII--LYEDEEFDQHQRQ 62
M++SA G++++L+E P LK AL LN+ V+ FW EIS SV I LYEDE F RQ
Sbjct: 1 MITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQ 58
Query: 63 LAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAES 122
AAL+ SKVFY+LG +SL+YALGAG LF+V+++S+YV T++AK ID Y + AE
Sbjct: 59 FAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENAEL 118
Query: 123 ND-EAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLS 181
+ E VD RLE IV +M +C+ D KY+QA+GIA+E RRLD E+ I S++V G L+
Sbjct: 119 PEGEKKPVDERLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDIFEKTILESNDVPGMLA 178
Query: 182 YCINVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLR 241
Y + + S + L PD++++CQCL+FLD+P+ V ILEKL++
Sbjct: 179 YSLKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVK 238
Query: 242 SENKDDALLAFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDP---PSAQND 298
+N L+A+QI FDL E+ Q FL +V +L T P+ +V PGS + P ++ D
Sbjct: 239 EDN---LLMAYQICFDLYESASQQFLSSVIQNLRTVGT-PIASV-PGSTNTGTVPGSEKD 293
Query: 299 SSTAEDVQMNEGTPASNVNVQDEDPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKS 358
S E + T + +PK+ +++K+ ILSGE +I+L LQFL +N +
Sbjct: 294 SDAMEAEEKPGSTCVGKSAEINPEPKD-----QISKMIKILSGEMAIELHLQFLIRNNNT 348
Query: 359 DLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATA 418
DL+ILK K +V RNSVCH+AT+ AN+ MH GTT D FLR+NL+WL+RATNWAKF+ATA
Sbjct: 349 DLMILKNTKDAV--RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATA 406
Query: 419 GLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDS 478
LGVIH+GH ++ LMA YALGLIHANHG I +L +
Sbjct: 407 SLGVIHKGHEKEALQLMA--TYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQ 464
Query: 479 LRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTA 538
L++ + ++++H +D+YD +K LY D AV GEAAG+++GL+M+G+
Sbjct: 465 LKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSK 524
Query: 539 SEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMY 597
+ +A E M+ YA ETQHEKI+RGLA+GIAL +YGR EEAD LIE + RD+DPILR GMY
Sbjct: 525 NAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMY 584
Query: 598 ALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESY 657
+A+AY G+ NNKAIR+LLH AVSDV+DDVRR AV +LGF+L+ PEQ P +VSLLSESY
Sbjct: 585 TVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESY 644
Query: 658 NPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDS 717
NPHVRYGAA+A+GI CAGTG EAI+LLEP+T+D V++VRQGALIA A++M+Q E
Sbjct: 645 NPHVRYGAAMALGICCAGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCP 704
Query: 718 RVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLS 777
+V FR+ K+I DKH+D M+K GAILA GILDAGG NV I L S+T H + +VVG+
Sbjct: 705 KVSQFRQLYSKVINDKHDDVMAKFGAILAQGILDAGGHNVIISLQSRTGHTHMPSVVGVL 764
Query: 778 VFSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTVPTTTS 837
VF+QFW+W+PL +F+SL+F+PT +IGLN DLK+P+ ++ S+ KPS F YP P VP
Sbjct: 765 VFTQFWFWFPLSHFLSLAFTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYPPPLEVPKEKE 824
Query: 838 AVKLPAAVLS 847
K+ AVLS
Sbjct: 825 KEKVSTAVLS 834
Score = 100 (40.3 bits), Expect = 3.6e-220, Sum P(2) = 3.6e-220
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 880 KGKSSNEKDGDSMQVDXXXXXXXXXXX-----SFEILINPARVVPAQEKFIKFLEDSRYV 934
K K +K+ + M+VD +F++L NPARV+PAQ K + E RY
Sbjct: 844 KEKEKEKKEEEKMEVDETEKKDEKEKKKEPEPNFQLLDNPARVMPAQLKVLTMTESCRYQ 903
Query: 935 PVKSAP-SGFVLLRDLRPNEPEVL 957
P K G ++L+D + E++
Sbjct: 904 PFKPLSIGGIIILKDTSEDMEELV 927
>UNIPROTKB|F1PX57 [details] [associations]
symbol:PSMD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042176 "regulation of protein catabolic
process" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GeneTree:ENSGT00550000074915 OMA:CVENAEL Pfam:PF01851
EMBL:AAEX03014431 Ensembl:ENSCAFT00000017372 Uniprot:F1PX57
Length = 953
Score = 2029 (719.3 bits), Expect = 6.1e-218, Sum P(2) = 6.1e-218
Identities = 420/844 (49%), Positives = 566/844 (67%)
Query: 11 GLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPII--LYEDEEFDQHQRQLAALLV 68
G++++L+E P LK AL LN+ V+ FW EIS SV I LYEDE F RQ AAL+
Sbjct: 7 GIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQFAALVA 64
Query: 69 SKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAESND-EAA 127
SKVFY+LG +SL+YALGAG LF+V+++S+YV T++AK ID Y + A+ + E
Sbjct: 65 SKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPEGEKK 124
Query: 128 NVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLSYCINVS 187
+D RLE IV +M +C+ D KY+QA+GIA+E RRLD E+ I S++V G L+Y + +
Sbjct: 125 PIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAYSLKLC 184
Query: 188 HSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLRSENKDD 247
S + L PD++++CQCL+FLD+P+ V ILEKL++ +N
Sbjct: 185 MSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKEDN--- 241
Query: 248 ALLAFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDPPSAQNDSSTAEDVQM 307
L+A+QI FDL E+ Q FL +V +L T P+ +V PGS + + +E ++
Sbjct: 242 LLMAYQICFDLYESASQQFLSSVIQNLRTVGT-PIASV-PGSTNTGTVPGSEKDSESMET 299
Query: 308 NEGTPASNVNVQDE---DPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKSDLLILK 364
E T + V E +PK+ + L IK ILSGE +I+L LQFL +N +DL+ILK
Sbjct: 300 EEKTGSVLVGKTPEVSPEPKD----QTLKMIK-ILSGEMAIELHLQFLIRNNNTDLMILK 354
Query: 365 TIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATAGLGVIH 424
K +V RNSVCH+AT+ AN+ MH GTT D FLR+NL+WL+RATNWAKF+ATA LGVIH
Sbjct: 355 NTKDAV--RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATASLGVIH 412
Query: 425 RGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDSLRSTNV 484
+GH ++ LMA YALGLIHANHG I +L + L++ +
Sbjct: 413 KGHEKEALQLMA--TYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKNASN 470
Query: 485 EVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEKAGE 544
++++H +D+YD +K LY D AV GEAAG+++GL+M+G+ + +A E
Sbjct: 471 DIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIE 530
Query: 545 -MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMYALALAY 603
M+ YA ETQHEKI+RGLA+GIAL +YGR EEAD LIE + RD+DPILR GMY +A+AY
Sbjct: 531 DMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMYTVAMAY 590
Query: 604 SGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESYNPHVRY 663
G+ NNKAIR+LLH AVSDV+DDVRR AV +LGF+L+ PEQ P +VSLLSESYNPHVRY
Sbjct: 591 CGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESYNPHVRY 650
Query: 664 GAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDSRVGTFR 723
GA +A+GI CAGTG EAI+LLEP+T+D V++VRQGALIA A++M+Q E +V FR
Sbjct: 651 GADMALGICCAGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCPKVNQFR 710
Query: 724 RQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLSVFSQFW 783
+ K+I DKH+D M+K GAILA GILDAGG NVTI L S+T H + +VVG+ VF+QFW
Sbjct: 711 QLYSKVINDKHDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVLVFTQFW 770
Query: 784 YWYPLIYFISLSFSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTVPTTTSAVKLPA 843
+W+PL +F+SL+++PT +IGLN DLK+P+ ++ S+ KPS F YP P VP K+
Sbjct: 771 FWFPLSHFLSLAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVST 830
Query: 844 AVLS 847
AVLS
Sbjct: 831 AVLS 834
Score = 99 (39.9 bits), Expect = 6.1e-218, Sum P(2) = 6.1e-218
Identities = 33/125 (26%), Positives = 52/125 (41%)
Query: 880 KGKSSNEKDGDSMQVDXXXXXXXXXXX-----SFEILINPARVVPAQEKFIKFLEDSRYV 934
K K +K+ + M+VD +F++L NPARV+PAQ K + E RY
Sbjct: 842 KEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNFQLLDNPARVMPAQLKVLTMPETCRYQ 901
Query: 935 PVKSAPSGFVLLRDLRPNEPEVLSLTDXXXXXXXXXXXXXXXXXXXXXXXMAVDEEPQPP 994
P K G +++ L+ ++ L + ++EP+PP
Sbjct: 902 PFKPLSIGGIII--LKDTSEDIEELVEPVAAHGPKIEEE--------------EQEPEPP 945
Query: 995 APFEY 999
PFEY
Sbjct: 946 EPFEY 950
>FB|FBgn0028692 [details] [associations]
symbol:Rpn2 "Regulatory particle non-ATPase 2" species:7227
"Drosophila melanogaster" [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0004175 "endopeptidase activity"
evidence=IDA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 EMBL:AE014297 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0006508 GO:GO:0050790
GO:GO:0006974 GO:GO:0004175 GO:GO:0042176 GO:GO:0008540
BRENDA:3.4.25.1 eggNOG:COG5116 GeneTree:ENSGT00550000074915
KO:K03032 OMA:CVENAEL Pfam:PF01851 EMBL:AF145303 EMBL:AF186594
EMBL:AF312231 EMBL:AY069503 EMBL:BT001598 EMBL:BT044102
RefSeq:NP_651677.2 UniGene:Dm.6875 ProteinModelPortal:Q9V3P6
SMR:Q9V3P6 IntAct:Q9V3P6 MINT:MINT-745147 STRING:Q9V3P6
PaxDb:Q9V3P6 PRIDE:Q9V3P6 EnsemblMetazoa:FBtr0085385 GeneID:43449
KEGG:dme:Dmel_CG11888 UCSC:CG11888-RA CTD:6185 FlyBase:FBgn0028692
InParanoid:Q9V3P6 OrthoDB:EOG4BVQ8J PhylomeDB:Q9V3P6
GenomeRNAi:43449 NextBio:834007 Bgee:Q9V3P6 GermOnline:CG11888
Uniprot:Q9V3P6
Length = 1020
Score = 2010 (712.6 bits), Expect = 1.0e-216, Sum P(3) = 1.0e-216
Identities = 412/857 (48%), Positives = 576/857 (67%)
Query: 6 VSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPII--LYEDEEFDQHQRQL 63
++SA G++++L+E P LK+ AL L++ VD+FWPEIS S+ I L+ED F +++ L
Sbjct: 3 LTSAAGIISLLDEPMPDLKVFALKKLDNIVDEFWPEISESIEKIEMLHEDRSFPENK--L 60
Query: 64 AALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAESN 123
A ++ SKVFY+LG D+L+YALGAG LFDV+ ++Y T++AK ID Y + + + E+
Sbjct: 61 AGMVASKVFYHLGSFEDALTYALGAGDLFDVNARNEYTETIIAKCIDFYIAQRVEFIENP 120
Query: 124 DEAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLSYC 183
EA+ VD RLE IV RM+ +C+ D +++QA+GIA+E RR+D ++AI +SD+V G L+Y
Sbjct: 121 KEASVVDERLEGIVNRMIQRCLDDNQFRQALGIALETRRMDTFKDAIMKSDDVRGMLAYA 180
Query: 184 INVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLRSE 243
NV+ S + + L PDY+++CQCL+FL++P V +L+ L RS
Sbjct: 181 YNVTMSLIQNRGFRNEVLRCLVSLYRDLGVPDYVNMCQCLIFLEDPFAVAEMLDNLTRSS 240
Query: 244 NKDDALLAFQIAFDLVENEHQAFLLNVRDHL----PVPKTQPLQTVQP-G--SNDPPSAQ 296
+ + L+A+QIAFDL E+ Q FL NV HL P+P P T +P G S D ++
Sbjct: 241 VETNNLMAYQIAFDLYESATQEFLGNVLQHLKNTAPIPTALP-STFKPQGTTSEDGAKSE 299
Query: 297 NDSSTAEDVQMNEGTPASNV---NVQDEDPKEVIYAERLNKIKGILSGETSIQLTLQFLY 353
D S +++ + E TPA + + + E ++ + + K+ ILSGE SI L LQFL
Sbjct: 300 GDKSKSDE-DITEETPADDKVERTIDSLNEVEKLHQKNIEKLISILSGEVSIDLQLQFLI 358
Query: 354 SHNKSDLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAK 413
N +DL +L+ K++V R S+CH+AT+ ANA MH+GTT D FLR+NLDWL+RATNWAK
Sbjct: 359 RSNHADLQVLRGTKEAV--RVSICHTATVIANAFMHSGTTSDQFLRDNLDWLARATNWAK 416
Query: 414 FSATAGLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQ 473
+ATA LGVIHRGH + +LM YALGLIHANHG I
Sbjct: 417 LTATASLGVIHRGHEKDSLALMQ--SYLPKEAGPSSGYSEGGALYALGLIHANHGANIID 474
Query: 474 FLRDSLRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLL 533
+L L+ E ++H +D+Y+ +K LY D AV GEAAGI+MG++
Sbjct: 475 YLLQQLKDAQNENVRHGGCLGLGLAGMGTHRQDLYEQLKFNLYQDDAVTGEAAGIAMGMV 534
Query: 534 MVGTASEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILR 592
M+G+ + +A E M++YA ETQHEKI+RGLA+GI+LT++ R EEAD L+ ++ D+DP+LR
Sbjct: 535 MLGSKNAQAIEDMVSYAQETQHEKILRGLAVGISLTMFSRLEEADPLVTSLSSDKDPVLR 594
Query: 593 YGGMYALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSL 652
GMY +A+AY+GT +NKAIR+LLH AVSDV+DDVRR AV A+GF+L+ PEQ P +VSL
Sbjct: 595 RSGMYTIAMAYNGTGSNKAIRKLLHVAVSDVNDDVRRAAVTAIGFILFRSPEQCPSVVSL 654
Query: 653 LSESYNPHVRYGAALAVGISCAGTGLSEAISLLEPLTS-DVVDFVRQGALIAMAMVMVQI 711
L+ESYNPHVRYGAA+A+GI+CAGTGL EAI+LLEP+ D V+FVRQGALIA AM+++Q
Sbjct: 655 LAESYNPHVRYGAAMALGIACAGTGLREAIALLEPMVKFDPVNFVRQGALIASAMILIQH 714
Query: 712 NEANDSRVGTFRRQL-EKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKI 770
+ + + TF RQL ++I +KHED M+K GAILA GI+DAGGRN T+ L S+T H +
Sbjct: 715 TDQSCPK-STFFRQLYAEVISNKHEDVMAKYGAILAQGIIDAGGRNATLSLQSRTGHTNL 773
Query: 771 TAVVGLSVFSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPT 830
AVVG+ F+Q+WYW+PL + +SL+F+PT +IGLN DLK+P+ E+ S AKPSL+ YP P
Sbjct: 774 QAVVGMLAFTQYWYWFPLAHTLSLAFTPTCVIGLNSDLKMPKMEYKSAAKPSLYAYPAPL 833
Query: 831 TVPTTTSAVKLPAAVLS 847
+ K+ AVLS
Sbjct: 834 EEKKSEEREKVATAVLS 850
Score = 68 (29.0 bits), Expect = 1.0e-216, Sum P(3) = 1.0e-216
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 883 SSNEKDGDSMQVDXXXXXXXXXXXSFEILINPARVVPAQEKFIKFLEDSRYVPVKSAPSG 942
+S+EKD D + + EIL NPARV+ Q K + ++ Y P+K G
Sbjct: 920 TSSEKDKDK---EKDKKEKKEPEPTSEILQNPARVLRQQLKVLSVIDGQSYEPLKDVTIG 976
Query: 943 FVLL 946
+++
Sbjct: 977 GIIV 980
Score = 55 (24.4 bits), Expect = 1.0e-216, Sum P(3) = 1.0e-216
Identities = 8/12 (66%), Positives = 11/12 (91%)
Query: 988 DEEPQPPAPFEY 999
++EP+PP PFEY
Sbjct: 1006 EKEPEPPEPFEY 1017
>DICTYBASE|DDB_G0287953 [details] [associations]
symbol:psmD1 "26S proteasome regulatory subunit S1"
species:44689 "Dictyostelium discoideum" [GO:0050790 "regulation of
catalytic activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 dictyBase:DDB_G0287953
INTERPRO:IPR002015 GO:GO:0005634 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GenomeReviews:CM000154_GR GO:GO:0004175 GO:GO:0006511 GO:GO:0042176
EMBL:AAFI02000105 GO:GO:0005838 eggNOG:COG5116 KO:K03032
OMA:CVENAEL Pfam:PF01851 RefSeq:XP_636972.1
ProteinModelPortal:Q54JM5 IntAct:Q54JM5 STRING:Q54JM5 PRIDE:Q54JM5
EnsemblProtists:DDB0232977 GeneID:8626381 KEGG:ddi:DDB_G0287953
ProtClustDB:CLSZ2728851 Uniprot:Q54JM5
Length = 975
Score = 1468 (521.8 bits), Expect = 2.3e-205, Sum P(2) = 2.3e-205
Identities = 318/800 (39%), Positives = 475/800 (59%)
Query: 217 LSICQCLMFLDEPEGVVSILEKLLRSENKDDALLAFQIAFDLVENEHQAFLLNVRDHLPV 276
L I L E +S+++ L+ +N + I L++ + ++ LL + +
Sbjct: 196 LGILVNLHLAQEKPDYLSVVQCLIFLDNHIEVAT---ILLSLIKKDEESLLLAYQIGFDL 252
Query: 277 PKTQPLQTVQPGSNDPPSAQNDSSTAEDVQMNEGTPASN---VNVQDEDPKE---VIYAE 330
+ Q + N P + S+T TPAS+ +++ + K + +
Sbjct: 253 FQNSTQQFLLNVRNRLPPVEKKSTTTTTT-----TPASDSMEIDIDSGNEKSGGSSSFEQ 307
Query: 331 RLNKIKGILSGETSIQLTLQFLYSHNKSDLLILKTIKQSVEM-RNSVCHSATIYANAIMH 389
RL ++ IL G+ SI + L+FLY + +D+ IL+++K + E+ + ++ +S T++ANA+MH
Sbjct: 308 RLERLHSILIGDVSIGMNLEFLYRNCSTDMHILQSMKTTSELHKGAIFYSGTLFANALMH 367
Query: 390 AGTTVDTFLRENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPXXXXXXXXXXXX 449
AGTT DTFLR N++WL ++T+W KFSA + LGVI++GH+++ +SL+
Sbjct: 368 AGTTRDTFLRSNIEWLYKSTHWTKFSAISSLGVINKGHIKESKSLLK--TYLPGASVNQT 425
Query: 450 XXXXXXXXYALGLIHANHGEGIKQFLRDSLRSTNVEVIQHXXXXXXXXXXXXXXDEDIYD 509
YALGLIHA+HGE I +L + L N ++ H +D+Y+
Sbjct: 426 PYSESGSLYALGLIHASHGEEIIDYLVEKLHINNA-ILHHGASLGLGLAAMATGRDDLYE 484
Query: 510 DIKNVLYTDSAVAGEAAGISMGLLMVGTASEKA-GEMLTYAHETQHEKIIRGLALGIALT 568
D+K+VLY D AV+GEAAG++MGL+M+G+ ++KA EML YAHETQHEK IR L++G+A
Sbjct: 485 DLKSVLYNDDAVSGEAAGLAMGLVMLGSGAKKAIEEMLAYAHETQHEKTIRSLSMGLAFL 544
Query: 569 VYGREEEADTLIEQMTRDQDPILRYGGMYALALAYSGTANNKAIRQLLHFAVSDVSDDVR 628
+YG+EE ADTLIEQM D+DP++RYGGMYA+A AY GT +N A+R+LLH AVSD +D VR
Sbjct: 545 MYGKEESADTLIEQMIGDKDPLIRYGGMYAIAFAYCGTGHNDALRKLLHVAVSDGTDSVR 604
Query: 629 RTAVLALGFVLYSEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAISLLEPL 688
R AV +GFVL +PE+ P+ ++LL+ESYNPHVRYGAA A+GI+CAGTG +A+ +L+ L
Sbjct: 605 RAAVTCIGFVLSRQPEKCPKAIALLAESYNPHVRYGAAFALGIACAGTGQRDALEILKSL 664
Query: 689 TSDVVDFVRQGALIAMAMVMVQINEANDSRVGTFRRQLEKIILDKHEDTMSKMGAILASG 748
T+D V +V+Q A I+MAMV++Q ++ T R+ I DK ED+MSK GA+LA G
Sbjct: 665 TTDSVGYVKQAAWISMAMVLIQTSKELVPEAETARKLFATCISDKREDSMSKFGAVLAFG 724
Query: 749 ILDAGGRNVTIRLLSKTKHDKITAVVGLSVFSQFWYWYPLIYFISLSFSPTALIGLNYDL 808
++DAGGRN TI+L S + H + A+VG++ F QFWYW+P+ +F+ L+ +PT++IGLN +L
Sbjct: 725 VIDAGGRNSTIQLHSPSGHKNMNAIVGIAGFLQFWYWFPMTHFMGLALTPTSIIGLNKNL 784
Query: 809 KVPRFEFLSHAKPSLFEYPKPTTVPTTTSAV-KLPAAVLSTSXXXXXXXXXXXXXXXXXX 867
++P F F S+ +PSLF YP P T P+TTS+ K+ A+LS S
Sbjct: 785 EMPVFTFKSNCRPSLFAYP-PETKPSTTSSTNKIETAILSYSRKNKLQSSRSAMNIDQDV 843
Query: 868 XXXXXTDLSSAGKGKSSNEKDGDSMQVDXXXXXXXXXXXSFEILINPARVVPAQEKFIKF 927
+ + K K + EK+ + FE NPAR+VP Q ++++F
Sbjct: 844 EKKEKEEKEA--KEKEAKEKE------EKEAAKAEEKEPLFERKSNPARIVPRQLQYVQF 895
Query: 928 LEDSRYVPVKSAPS-GFVLLRDLRPNEPEVLSLTDXXXXXXXXXXXXXXXXXXXXXXXMA 986
+D+RY P+K +P+ G V+LRDL PNEPE L + + A
Sbjct: 896 -DDARYQPIKKSPAIGIVMLRDLTPNEPEQLVVKEKPETKQETVGNQSGTATATASLPNA 954
Query: 987 VDE------EPQPPAPFEYT 1000
EP P PFE+T
Sbjct: 955 TTTTSPTLPEPSTPEPFEFT 974
Score = 541 (195.5 bits), Expect = 2.3e-205, Sum P(2) = 2.3e-205
Identities = 125/298 (41%), Positives = 181/298 (60%)
Query: 6 VSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEI-STSVPII--LYEDEEFDQHQRQ 62
++S L++L+E LK ++L L+S VD+FW EI S+S+ I L +++F +H+
Sbjct: 4 INSVSNYLSLLDEDQLELKSYSLEKLDSCVDEFWSEIASSSIDKIKSLSVNKQFPKHE-- 61
Query: 63 LAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAES 122
LA+L++SKV+Y L + +S+ YAL AGSLF+V S+Y+ TLL K IDEY IK + + +
Sbjct: 62 LASLVLSKVYYNLSDFPNSMEYALSAGSLFNVLSKSEYIETLLYKFIDEY--IKLRTSTN 119
Query: 123 NDEAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLSY 182
D N P LE+IV M D+C +G Y+QA+GIAIE RRLD +E+AI++S NV+ LSY
Sbjct: 120 KDTVIN--PHLESIVMGMFDRCFKEGSYKQALGIAIEARRLDIIEKAISQSGNVNSMLSY 177
Query: 183 CINVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLRS 242
C+++ + VN PDYLS+ QCL+FLD V +IL L++
Sbjct: 178 CLHICNVSVNNRHFRHSVLGILVNLHLAQEKPDYLSVVQCLIFLDNHIEVATILLSLIKK 237
Query: 243 ENKDDALLAFQIAFDLVENEHQAFLLNVRDHLP-VPKTQPLQTVQPGSNDPPSAQNDS 299
+ ++ LLA+QI FDL +N Q FLLNVR+ LP V K T ++D DS
Sbjct: 238 D-EESLLLAYQIGFDLFQNSTQQFLLNVRNRLPPVEKKSTTTTTTTPASDSMEIDIDS 294
>ASPGD|ASPL0000047917 [details] [associations]
symbol:AN1700 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:BN001307 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 EMBL:AACD01000026 InterPro:IPR004155 SMART:SM00567
eggNOG:COG5116 HOGENOM:HOG000189403 KO:K03032 OMA:CVENAEL
Pfam:PF01851 OrthoDB:EOG4KD9V5 RefSeq:XP_659304.1
ProteinModelPortal:Q5BCN0 STRING:Q5BCN0
EnsemblFungi:CADANIAT00008343 GeneID:2874940 KEGG:ani:AN1700.2
Uniprot:Q5BCN0
Length = 1144
Score = 1643 (583.4 bits), Expect = 2.2e-189, Sum P(2) = 2.2e-189
Identities = 356/860 (41%), Positives = 507/860 (58%)
Query: 129 VDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITR-SDNV---HGT----- 179
V +L+A++ER+ ++C +Y+Q +GIAIE + L+ L AI R S++ +G
Sbjct: 212 VQGQLKAVIERLFEQCFLQKRYRQVIGIAIEAKDLEVLRTAIMRASEDAKQQNGESRQSE 271
Query: 180 --LSYCINVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILE 237
+ Y +++ V ++PSPDY +I +C+++L+E IL
Sbjct: 272 ELMEYVLDICMGVVQERGFRNEILKLILELLNEIPSPDYFAIAKCVVYLNEHSMASVILR 331
Query: 238 KLLRSENKDDALLAFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDPPSAQN 297
+L+ + +A+QI+FDL +N Q FL V H Q + + P + +
Sbjct: 332 QLVEKGDARSLAVAYQISFDLYDNSTQEFLQKV--H------QEISELVPEKTEDSETKE 383
Query: 298 DSSTAEDVQMNEGTPASNVNVQDEDPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNK 357
+ D ++ + + N + E A I IL G +IQL ++FL+ +++
Sbjct: 384 EEPKESDALLDNQSSSIGANADSKVSAEARTA--FKNILDILDGIKTIQLNMEFLHRNSR 441
Query: 358 SDLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSAT 417
D+ IL ++ ++E RNS+ HSA +N M+AGT D F R+NL+WL +A NW+KF+AT
Sbjct: 442 VDIAILNKLRDTLEPRNSIFHSAITISNGFMYAGTAQDKFFRDNLEWLGKAVNWSKFTAT 501
Query: 418 AGLGVIHRGHLQQGRSLMAPXX----XXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQ 473
A LGVIHRG+L QG+ L+ P YALGLI+ANHG
Sbjct: 502 AALGVIHRGNLSQGQRLLQPYLPKENSIDGVGNSGSLYSQGGSLYALGLIYANHGGMAVD 561
Query: 474 FLRDSLRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLL 533
++RD + EVIQH DE IYDD++NVLYTDSA+ GEA G++MGL+
Sbjct: 562 YIRDQFKKATEEVIQHGGALGLGVAGMATGDEGIYDDLRNVLYTDSALNGEAVGLAMGLV 621
Query: 534 MVGTASEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILR 592
M+GT + K E M+ YAH+TQHEKI+RGLA+G+AL +YGR+E AD LI + D DP LR
Sbjct: 622 MLGTGNMKVLEDMIQYAHDTQHEKIVRGLAMGMALIMYGRQEAADELINGLLGDPDPTLR 681
Query: 593 YGGMYALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSL 652
YGG+ +ALAY GT++NKA+R+LLH AVSDV+DDVRR AVL+LGF+L+ + + PR+V L
Sbjct: 682 YGGIMTIALAYCGTSSNKAVRKLLHVAVSDVNDDVRRVAVLSLGFILFRKHQSVPRMVEL 741
Query: 653 LSESYNPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQIN 712
LSESYNPHVRYGAA+A+GISCAGTGL EAI LLEP+ D DFVRQGALIA+AMV+VQ N
Sbjct: 742 LSESYNPHVRYGAAMALGISCAGTGLDEAIDLLEPMLKDSTDFVRQGALIALAMVLVQQN 801
Query: 713 EANDSRVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITA 772
EA + RV + R+ + K++ D+HED M+K G +A GI+DAGGRN TI L ++T + +
Sbjct: 802 EAMNPRVSSLRKTMMKMVSDRHEDAMAKFGCAIALGIIDAGGRNCTISLQTQTGNLNMPG 861
Query: 773 VVGLSVFSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTV 832
+VG +VF Q+WYW+PL +F+SLSF+PT++IG++ L+VP F+F S+ +PSLF+YP V
Sbjct: 862 IVGAAVFLQYWYWFPLTHFLSLSFAPTSVIGVDQKLEVPFFKFHSNTRPSLFDYPPEQQV 921
Query: 833 PTTTSAVKLPAAVLSTSXXXXXXXXXXXXXXXXXXXXXXXTDLS-----------SAGKG 881
+ K+ AVLST+ T + +
Sbjct: 922 KAEEAPEKVKTAVLSTTALAKRRALRREKQHRRESMDVDQTPTTPKVADQMPEKMETDED 981
Query: 882 KSSNE-KDGDSMQVDXXXXXXXXXXXSFEILINPARVVPAQEKFIKFLEDSRYVPVKSAP 940
K E K+GD V+ +E L N +RV+PAQ K++ F D RY PVK
Sbjct: 982 KGDEELKEGDKEAVEGQKKKAEREKVGYE-LENMSRVLPAQLKYLTF-PDPRYEPVKRPT 1039
Query: 941 SGFVLLRDLRPNEP-EVLSL 959
G V++ D P EP +V+ L
Sbjct: 1040 GGVVVVLDKTPEEPRDVIEL 1059
Score = 215 (80.7 bits), Expect = 2.2e-189, Sum P(2) = 2.2e-189
Identities = 51/152 (33%), Positives = 86/152 (56%)
Query: 6 VSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPII---------------- 49
++SA GL+ L+E LK+ AL L+S +D W E+ ++P I
Sbjct: 4 LASAAGLVGFLSEPDSELKVFALQTLDSQIDLLWTEVVDAIPQIRRLCGNGYQTNIQFLR 63
Query: 50 --LYEDEEFDQHQRQLAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAK 107
LYEDE+F + R+LAAL+ +KV+Y+L E ++S+ +ALGAG LF++ ++ T++AK
Sbjct: 64 EALYEDEDFPE--RELAALVAAKVYYHLQEYHESMVFALGAGKLFNLDNGGEFEETIIAK 121
Query: 108 AIDEYASIK-SKAAESNDEAANVDPRLEAIVE 138
+D + S+ S+ + D+ N++ VE
Sbjct: 122 CVDTFISLSTSERPSAGDQPTNLNTAFPTSVE 153
Score = 37 (18.1 bits), Expect = 7.4e-12, Sum P(2) = 7.4e-12
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 735 EDTMSKMGAILASGILDA 752
E+ +S GA A+G+L A
Sbjct: 1101 ENPLSGSGAAAAAGVLTA 1118
>UNIPROTKB|J9P4R4 [details] [associations]
symbol:PSMD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042176 "regulation of protein catabolic
process" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GeneTree:ENSGT00550000074915 Pfam:PF01851 EMBL:AAEX03014431
Ensembl:ENSCAFT00000044920 Uniprot:J9P4R4
Length = 701
Score = 1564 (555.6 bits), Expect = 1.4e-160, P = 1.4e-160
Identities = 331/680 (48%), Positives = 447/680 (65%)
Query: 5 MVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPII--LYEDEEFDQHQRQ 62
M++SA G++++L+E P LK AL LN+ V+ FW EIS SV I LYEDE F RQ
Sbjct: 1 MITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQ 58
Query: 63 LAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAES 122
AAL+ SKVFY+LG +SL+YALGAG LF+V+++S+YV T++AK ID Y + A+
Sbjct: 59 FAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADL 118
Query: 123 ND-EAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLS 181
+ E +D RLE IV +M +C+ D KY+QA+GIA+E RRLD E+ I S++V G L+
Sbjct: 119 PEGEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLA 178
Query: 182 YCINVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLR 241
Y + + S + L PD++++CQCL+FLD+P+ V ILEKL++
Sbjct: 179 YSLKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVK 238
Query: 242 SENKDDALLAFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDPPSAQNDSST 301
+N L+A+QI FDL E+ Q FL +V +L T P+ +V PGS + +
Sbjct: 239 EDN---LLMAYQICFDLYESASQQFLSSVIQNLRTVGT-PIASV-PGSTNTGTVPGSEKD 293
Query: 302 AEDVQMNEGTPASNVNVQDE---DPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKS 358
+E ++ E T + V E +PK+ + L IK ILSGE +I+L LQFL +N +
Sbjct: 294 SESMETEEKTGSVLVGKTPEVSPEPKD----QTLKMIK-ILSGEMAIELHLQFLIRNNNT 348
Query: 359 DLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATA 418
DL+ILK K +V RNSVCH+AT+ AN+ MH GTT D FLR+NL+WL+RATNWAKF+ATA
Sbjct: 349 DLMILKNTKDAV--RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATA 406
Query: 419 GLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDS 478
LGVIH+GH ++ LMA YALGLIHANHG I +L +
Sbjct: 407 SLGVIHKGHEKEALQLMA--TYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQ 464
Query: 479 LRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTA 538
L++ + ++++H +D+YD +K LY D AV GEAAG+++GL+M+G+
Sbjct: 465 LKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSK 524
Query: 539 SEKAGE-MLTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMY 597
+ +A E M+ YA ETQHEKI+RGLA+GIAL +YGR EEAD LIE + RD+DPILR GMY
Sbjct: 525 NAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMY 584
Query: 598 ALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESY 657
+A+AY G+ NNKAIR+LLH AVSDV+DDVRR AV +LGF+L+ PEQ P +VSLLSESY
Sbjct: 585 TVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESY 644
Query: 658 NPHVRYGAALAVGISCAGTG 677
NPHVRYGA +A+GI CAGTG
Sbjct: 645 NPHVRYGADMALGICCAGTG 664
Score = 157 (60.3 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 56/237 (23%), Positives = 104/237 (43%)
Query: 524 EAAGI-SMGLLMVGTASEKAGEMLTYAHETQHEKIIRGLALGIALTVYG--REEEADTLI 580
E G+ ++GL+ + +L ++ + G +LG+ L G R++ D L
Sbjct: 439 EGGGLYALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLK 498
Query: 581 EQMTRDQDPILRYGGMYALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLY 640
+ +D D + AL L G+ N +AI ++ +A + + R + + V+Y
Sbjct: 499 TNLYQD-DAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKILRGLAVGIALVMY 557
Query: 641 SEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAIS-LLEPLTSDVVDFVRQG 699
E+ ++ L +P +R V ++ G+G ++AI LL SDV D VR+
Sbjct: 558 GRMEEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRA 617
Query: 700 ALIAMAMVMVQINEANDSRVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRN 756
A+ ++ ++ + E S V +L + + + GA +A GI AG N
Sbjct: 618 AVESLGFILFRTPEQCPSVVS---------LLSESYNPHVRYGADMALGICCAGTGN 665
>SGD|S000001337 [details] [associations]
symbol:RPN2 "Subunit of the 26S proteasome" species:4932
"Saccharomyces cerevisiae" [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IMP;IPI] [GO:0034515 "proteasome
storage granule" evidence=IDA] [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0004175 "endopeptidase activity"
evidence=IMP] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043248 "proteasome
assembly" evidence=IGI] [GO:0050790 "regulation of catalytic
activity" evidence=IEA] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 SGD:S000001337 INTERPRO:IPR002015 GO:GO:0005634
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:BK006942 GO:GO:0050790 GO:GO:0043248 GO:GO:0006511 EMBL:Z37997
GO:GO:0042176 GO:GO:0034515 GO:GO:0008540 PDB:4B4T PDBsum:4B4T
eggNOG:COG5116 GeneTree:ENSGT00550000074915 HOGENOM:HOG000189403
KO:K03032 OMA:CVENAEL Pfam:PF01851 OrthoDB:EOG4KD9V5 EMBL:L06321
PIR:S48369 RefSeq:NP_012190.1 PDB:4ADY PDBsum:4ADY
ProteinModelPortal:P32565 SMR:P32565 DIP:DIP-4638N IntAct:P32565
MINT:MINT-539880 STRING:P32565 PaxDb:P32565 PeptideAtlas:P32565
EnsemblFungi:YIL075C GeneID:854735 KEGG:sce:YIL075C NextBio:977437
Genevestigator:P32565 GermOnline:YIL075C Uniprot:P32565
Length = 945
Score = 1186 (422.6 bits), Expect = 5.3e-160, Sum P(2) = 5.3e-160
Identities = 255/633 (40%), Positives = 372/633 (58%)
Query: 338 ILSGETSIQLTLQFLYSHNKSDLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTF 397
ILSG + FL ++ D+ +L K S++ + S+ H+A AN MHAGTT ++F
Sbjct: 289 ILSGLPTCDYYNTFLLNNKNIDIGLLNKSKSSLDGKFSLFHTAVSVANGFMHAGTTDNSF 348
Query: 398 LRENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXX 457
++ NL WL +A NWAKF+ATA LGVIH+G+L +G+ +MAP
Sbjct: 349 IKANLPWLGKAQNWAKFTATASLGVIHKGNLLEGKKVMAPYLPGSRASSRFIKGGSL--- 405
Query: 458 YALGLIHANHGEGIKQFLRDSLRSTN-------VEVIQHXXXXXXXXXXXXXXDEDIYDD 510
Y LGLI+A G +L++ + + V+V+ H + ++Y+
Sbjct: 406 YGLGLIYAGFGRDTTDYLKNIIVENSGTSGDEDVDVLLHGASLGIGLAAMGSANIEVYEA 465
Query: 511 IKNVLYTDSAVAGEAAGISMGLLMVGTASEKA-GEMLTYAHETQHEKIIRGLALGIALTV 569
+K VLY DSA +GEAA + MGL M+GT +A +M TY+ ETQH I RGLA+G+AL
Sbjct: 466 LKEVLYNDSATSGEAAALGMGLCMLGTGKPEAIHDMFTYSQETQHGNITRGLAVGLALIN 525
Query: 570 YGREEEADTLIEQMTRDQDPILRYGGMYALALAYSGTANNKAIRQLLHFAVSDVSDDVRR 629
YGR+E AD LI +M + +LRYGG + +ALAY+GT NN A+++LLH AVSD +DDVRR
Sbjct: 526 YGRQELADDLITKMLASDESLLRYGGAFTIALAYAGTGNNSAVKRLLHVAVSDSNDDVRR 585
Query: 630 TAVLALGFVLYSEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAISLLEPLT 689
AV+ALGFVL + PRIV LLS+S+N HVR G A A+GI+CAG GL AI +L+PLT
Sbjct: 586 AAVIALGFVLLRDYTTVPRIVQLLSKSHNAHVRCGTAFALGIACAGKGLQSAIDVLDPLT 645
Query: 690 SDVVDFVRQGALIAMAMVMVQINEANDSRVGTFRRQLEKIILDKHEDTMSKMGAILASGI 749
D VDFVRQ A+IA++M+++Q E + +V + +I +KH++ ++K GA +A GI
Sbjct: 646 KDPVDFVRQAAMIALSMILIQQTEKLNPQVADINKNFLSVITNKHQEGLAKFGACVAQGI 705
Query: 750 LDAGGRNVTIRLLSKTKHDKIT-AVVGLSVFSQFWYWYPLIYFISLSFSPTALIGLN-YD 807
++AGGRNVTI+L + T +VVGL +FSQFWYW+PL +F+SLSF+PT +IG+ D
Sbjct: 706 MNAGGRNVTIQLENADTGTLDTKSVVGLVMFSQFWYWFPLAHFLSLSFTPTTVIGIRGSD 765
Query: 808 LKVPRFEFLSHAKPSLFEYPKPTTVPTTTSAVKLPAAVLSTSXXXXXXXXXXXXXXXXXX 867
+P+F+ +AK F YP+ + K+ AVLST+
Sbjct: 766 QAIPKFQMNCYAKEDAFSYPRMYEEASGKEVEKVATAVLSTTARAKARAKKTKKEKGPNE 825
Query: 868 XXXXXTDLSSAGKGKSSNEKD-GDSMQVDXXXXXXXXXXXSFEILINPARVVPAQEKFIK 926
+ K + +N+K ++ + D +++ N R++P Q ++I
Sbjct: 826 EEKKK-EHEEKEKERETNKKGIKETKENDEEFYKNKYSSKPYKV-DNMTRILPQQSRYIS 883
Query: 927 FLEDSRYVPVKS--APSGFVLLRDLRPNEPEVL 957
F++D R+VPV+ +G V+LRD P EP L
Sbjct: 884 FIKDDRFVPVRKFKGNNGVVVLRDREPKEPVAL 916
Score = 394 (143.8 bits), Expect = 5.3e-160, Sum P(2) = 5.3e-160
Identities = 97/274 (35%), Positives = 159/274 (58%)
Query: 6 VSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPII--LYEDEEFDQHQRQL 63
+++A LLA+L E+ S+K +AL ++N+ VDQ W EIS +P I LY+D+ F R++
Sbjct: 3 LTTAAPLLALLRENQDSVKTYALESINNVVDQLWSEISNELPDIEALYDDDTFSD--REM 60
Query: 64 AALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAESN 123
AAL+ SKV+Y LGE ++ YAL A FD+ E S +V T+++K+I+ Y SK +
Sbjct: 61 AALIASKVYYNLGEYESAVKYALAAKDRFDIDEKSQFVETIVSKSIEMYVQEASKQYTKD 120
Query: 124 DEAAN---VDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAI-------TRS 173
++ +DP+L +I ERM++KC+ + + A+GIA+E RLD +E A+ + S
Sbjct: 121 EQFYTKDIIDPKLTSIFERMIEKCLKASELKLALGIALEGYRLDIIESALKSKLDQDSTS 180
Query: 174 DNVHGTLSYCINVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVV 233
+NV ++Y + ++ + V +P+ DYL++ + ++ L++ G+
Sbjct: 181 ENVK-IINYLLTLAITTVTNSKFRSSILRKSFDFLMNMPNCDYLTLNKVVVNLNDA-GLA 238
Query: 234 SILEKLLRSENKDDALLAFQIAFDLVENEHQAFL 267
L K L+ EN D+ L A QIAFDLV + Q L
Sbjct: 239 LQLFKKLKEEN-DEGLSA-QIAFDLVSSASQQLL 270
>POMBASE|SPBC17D11.07c [details] [associations]
symbol:rpn2 "19S proteasome regulatory subunit Rpn2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISO] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0004175 "endopeptidase
activity" evidence=ISO] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 PomBase:SPBC17D11.07c INTERPRO:IPR002015
GO:GO:0005829 GO:GO:0005634 GO:GO:0007346 GO:GO:0030234
SUPFAM:SSF48371 GO:GO:0043161 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:CU329671 GO:GO:0050790 GenomeReviews:CU329671_GR GO:GO:0042176
GO:GO:0008540 eggNOG:COG5116 HOGENOM:HOG000189403 KO:K03032
OMA:CVENAEL Pfam:PF01851 PIR:T39718 RefSeq:NP_596381.1
ProteinModelPortal:O74762 IntAct:O74762 STRING:O74762
EnsemblFungi:SPBC17D11.07c.1 GeneID:2540191 KEGG:spo:SPBC17D11.07c
OrthoDB:EOG4KD9V5 NextBio:20801323 Uniprot:O74762
Length = 965
Score = 1477 (525.0 bits), Expect = 2.3e-151, P = 2.3e-151
Identities = 293/631 (46%), Positives = 406/631 (64%)
Query: 338 ILSGETSIQLTLQFLYSHNKSDLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTF 397
ILSGE +++ +FLY+HN +D+LIL K S+E RNSV H+A +ANA M+ GT+ D+F
Sbjct: 308 ILSGEQTVKYDREFLYAHNNTDMLILNRTKDSLEARNSVFHNAVTFANAFMNFGTSSDSF 367
Query: 398 LRENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXX 457
R+NL WLS+A NW+KF+ATA LGVIHRG+ Q +++ P
Sbjct: 368 FRDNLSWLSKANNWSKFTATAALGVIHRGYYNQAMNILRPYLPEEDAPSSSTYSEGGAF- 426
Query: 458 YALGLIHANHGEGIKQFLRDSLRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYT 517
YA+GLIHANHG G+ ++LR+ L+ T E++Q+ DE +Y+ +K +L+
Sbjct: 427 YAMGLIHANHGRGVTEYLREQLKHTEDEIVQYGLLLGIGLTGMASRDETLYESVKTILFN 486
Query: 518 DSAVAGEAAGISMGLLMVGTASEKA-GEMLTYAHETQHEKIIRGLALGIALTVYGREEEA 576
D+AVAG AAGISMGL+M+GTAS A EML YAHETQHEKIIRGL +GIAL VYGR++EA
Sbjct: 487 DNAVAGSAAGISMGLIMLGTASSAAIDEMLQYAHETQHEKIIRGLGIGIALIVYGRQQEA 546
Query: 577 DTLIEQMTRDQDPILRYGGMYALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALG 636
D +I+++ D DP LRY GM+A ALAY GT+N+K +R +LH +VSDV+DDVRR AV ALG
Sbjct: 547 DGIIKELNNDLDPTLRYAGMFATALAYCGTSNSKIVRDVLHISVSDVNDDVRRAAVCALG 606
Query: 637 FVLYSEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFV 696
F+ + +P V LL +SYNPHVRYG+A+A+GI+CA +G + A+ LL L D DFV
Sbjct: 607 FICFKDPNALISTVELLVDSYNPHVRYGSAIALGIACANSGSNAALDLLSRLVEDATDFV 666
Query: 697 RQGALIAMAMVMVQINEANDSRVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRN 756
RQGA+IA AM++ Q N+ +S+V R+ E++I +KHED ++K+GA LA GI+DAGGRN
Sbjct: 667 RQGAMIAQAMILTQHNDQLNSKVSGIRKHFEQVINEKHEDALAKLGATLAQGIIDAGGRN 726
Query: 757 VTIRLLSKTKHDKITAVVGLSVFSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFL 816
VTI L + T K++A+VGL+VF Q+WYW+PL +F+SLSFSPTALIGL+ +L P+F F+
Sbjct: 727 VTIALQTATGSLKLSAIVGLTVFLQYWYWFPLTHFMSLSFSPTALIGLDKNLNAPKFSFI 786
Query: 817 SHAKPSLFEYPKPTTVPTTTSAVKLPAAVLSTSXXXXXXXXXXXXXXXXXXXXXXXTDLS 876
S+ +P LF YP + PT + K+ AVLST+ +
Sbjct: 787 SNVRPKLFAYPPKSVQPTAKTVQKVETAVLSTTVKAQARAKRAEREKASKGSNDDEMKID 846
Query: 877 SAGKGKSSNEKDGDSMQVDXXXXXXXXXXXSF-------EILINPARVVPAQEKFIKFLE 929
K++ EK+ M++D + E L N RVVPAQ +I F
Sbjct: 847 K----KTTEEKEATPMEMDEEKSQDISINGNSKKEEPKSETLENFTRVVPAQLPYISFNL 902
Query: 930 DSRYVPVKSAPSGFVLLRDLRPNE-PEVLSL 959
+ RY PV+ G ++L D ++ P+++ L
Sbjct: 903 NGRYYPVRKFTGGVLMLIDRESDKAPDLIEL 933
Score = 450 (163.5 bits), Expect = 4.6e-39, P = 4.6e-39
Identities = 137/443 (30%), Positives = 216/443 (48%)
Query: 4 TMVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPII--LYEDEEFDQHQR 61
++++SAGGL+A+L+E L++HAL + F+DQ WPEIS V I +YED F + R
Sbjct: 10 SIITSAGGLMALLDEQERELQVHALLKIYEFIDQLWPEISDDVTKIEVMYEDHSFPE--R 67
Query: 62 QLAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAE 121
+LAAL+VSKV+YYLGE +++L +AL +G F ++SDY TL+ K ID + KS
Sbjct: 68 ELAALVVSKVYYYLGEYDEALLFALSSGPKFLHDKNSDYKETLIFKCIDMFIH-KSAELY 126
Query: 122 SNDEAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLS 181
N +A +D RL +VE + KC +++ +GIAIE RLD +E I +D
Sbjct: 127 KNPKADPLDERLSGVVEGIFQKCYAKNEWRHVLGIAIEAHRLDIIEY-ILNADKETDLKP 185
Query: 182 YCINVSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLR 241
Y + ++ + V PDY S+ +C++ L++ +L KL
Sbjct: 186 YVLELAMTVVLDIEFRNRLLRLLLSSFLTETEPDYFSVGKCVVHLNDASVAAKLLMKL-S 244
Query: 242 SENKDDALL-AFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDPPSAQNDSS 300
S+N D +LL A+Q+AFDL ++ Q FL +V D LP P + + +N ++ S
Sbjct: 245 SQNDDKSLLTAYQLAFDLEDSAPQEFLNSVMDLLPSPS---VANSEEDANADSKKEDSSP 301
Query: 301 TAEDVQMNEGTPASNVNVQDEDPKEVIYAER------LNKIKGILSGETSI---QLTLQ- 350
+++ G + +E +YA LN+ K L S+ +T
Sbjct: 302 CGYIIRILSGEQTVKYD------REFLYAHNNTDMLILNRTKDSLEARNSVFHNAVTFAN 355
Query: 351 -FLYSHNKSDLLILKTIKQSVEMRNSVCHSATIYANAIMHAG--TTVDTFLRENL---DW 404
F+ SD + + N +AT A ++H G LR L D
Sbjct: 356 AFMNFGTSSDSFFRDNLSWLSKANNWSKFTATA-ALGVIHRGYYNQAMNILRPYLPEEDA 414
Query: 405 LSRATNWAKFSATAGLGVIHRGH 427
S +T +++ A +G+IH H
Sbjct: 415 PSSST-YSEGGAFYAMGLIHANH 436
>GENEDB_PFALCIPARUM|PF14_0632 [details] [associations]
symbol:PF14_0632 "26S proteasome subunit,
putative" species:5833 "Plasmodium falciparum" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0050790 GO:GO:0004175 EMBL:AE014187 GO:GO:0006511
GO:GO:0042176 InterPro:IPR004155 SMART:SM00567 GO:GO:0005838
HOGENOM:HOG000189403 KO:K03032 Pfam:PF01851 RefSeq:XP_001348806.1
ProteinModelPortal:Q8IKH3 IntAct:Q8IKH3 MINT:MINT-1557099
PRIDE:Q8IKH3 EnsemblProtists:PF14_0632:mRNA GeneID:812214
KEGG:pfa:PF14_0632 EuPathDB:PlasmoDB:PF3D7_1466300 OMA:ANDENSH
ProtClustDB:CLSZ2733875 Uniprot:Q8IKH3
Length = 1172
Score = 933 (333.5 bits), Expect = 2.9e-151, Sum P(4) = 2.9e-151
Identities = 191/402 (47%), Positives = 268/402 (66%)
Query: 458 YALGLIHANHGEG---IKQFLRDSLRST-NVEVIQHXXXXXXXXX-XXXXXDEDIYDDIK 512
YALGLIHAN+ +K +L L+S N EV+QH DE+ YD++K
Sbjct: 591 YALGLIHANYNTNDKKVKNYLMSQLKSNMNDEVLQHGCCLGLGLVCLGDSNDENTYDELK 650
Query: 513 NVLYTDSAVAGEAAGISMGLLMVGTASEKA-GEMLTYAHETQHEKIIRGLALGIALTVYG 571
+LY+DSAVAGE+A ++GLL +G+ +K E+L YAH+TQHEKI R ++ + ++
Sbjct: 651 AILYSDSAVAGESAAYAIGLLKLGSGDDKCIDELLAYAHDTQHEKITRACSISLGFVMFQ 710
Query: 572 REEEADTLIEQMTRDQDPILRYGGMYALALAYSGTAN-NK-AIRQLLHFAVSDVSDDVRR 629
+E EAD+LIE++ D+D I+RYGGM+A+A+AY G +N NK I++LLHF+VSDVSDDVRR
Sbjct: 711 KEREADSLIEELVSDKDAIIRYGGMFAIAMAYCGLSNCNKHIIKKLLHFSVSDVSDDVRR 770
Query: 630 TAVLALGFVLYSEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAISLLEPLT 689
AV+ALGFVL + P Q P+ ++LL ESYNPHVRYGAALA+GI+C+ T EAI++L PL
Sbjct: 771 AAVIALGFVLCNSPNQVPKFLNLLIESYNPHVRYGAALALGIACSATANEEAINMLMPLL 830
Query: 690 SDVVDFVRQGALIAMAMVMVQINEANDSRVGTFRRQLEKIILDKHEDTMSKMGAILASGI 749
+D DFVRQ A I++ ++ Q NE + ++ ++ KI+ DKHED ++K GAI+++G+
Sbjct: 831 TDTTDFVRQSAFISLGLIFQQSNEHCNPNFKKYKEEIMKILSDKHEDIIAKFGAIVSAGL 890
Query: 750 LDAGGRNVTIRLLSKTKHD-KITAVVGLSVFSQFWYWYPLIYFISLSFSPTALIGLNYDL 808
LD GRN ++ + + A G +FSQ WYW+PLI+ ISL+F PT LIGL DL
Sbjct: 891 LDICGRNAISTFFTRRGNIIRPQAAAGFCLFSQLWYWFPLIHMISLTFMPTCLIGLTEDL 950
Query: 809 KVPR-FEFLSHAKPSLFEYPKPTTVPTTTSAVKLPAAVLSTS 849
KVP+ F LS + F+YP + T + AVLST+
Sbjct: 951 KVPKNFSILSTSNNQNFDYPSFLSKEKTQEKKETVTAVLSTT 992
Score = 407 (148.3 bits), Expect = 4.6e-81, Sum P(4) = 4.6e-81
Identities = 97/279 (34%), Positives = 151/279 (54%)
Query: 289 SNDPPSAQN-DSSTAEDVQMNEGTPASNVNVQD----ED-----PKEVIYAERLNKIKGI 338
+ND P+ N D D N+ +N+N + ED K+ I+ ++ K+ I
Sbjct: 401 TNDEPTYNNNDDKAINDGNDNDNNNNNNINNNNNNIVEDVLKYISKKHIFYNKMKKLLYI 460
Query: 339 LSGETSIQLTLQFLYSHNKSDLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFL 398
L+G+ + L ++FL+ +N +DL++L T K V+ R+S+ H + A+A+M GTT D FL
Sbjct: 461 LTGKVTGNLYIEFLHRNNHADLILLDTYKNIVDSRSSITHHGIVIAHALMQTGTTCDVFL 520
Query: 399 RENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMA---PXXXXXXXXXX-------- 447
R N++WLS+A NW KFSATA LGV+++GH+ + +++ P
Sbjct: 521 RSNIEWLSKAINWEKFSATASLGVVYKGHVNESFMVLSTHLPYNDVSTEIANNINVGLAP 580
Query: 448 XXXXXXXXXXYALGLIHANHGEG---IKQFLRDSLRST-NVEVIQHXXXXXXXXX-XXXX 502
YALGLIHAN+ +K +L L+S N EV+QH
Sbjct: 581 SGVYSEGGSLYALGLIHANYNTNDKKVKNYLMSQLKSNMNDEVLQHGCCLGLGLVCLGDS 640
Query: 503 XDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEK 541
DE+ YD++K +LY+DSAVAGE+A ++GLL +G+ +K
Sbjct: 641 NDENTYDELKAILYSDSAVAGESAAYAIGLLKLGSGDDK 679
Score = 259 (96.2 bits), Expect = 2.9e-151, Sum P(4) = 2.9e-151
Identities = 54/114 (47%), Positives = 80/114 (70%)
Query: 5 MVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPII--LYEDEEFDQHQRQ 62
+V+SA G++A+LNE SLKL L LN+ VD +WPE++ S+ I L EDE+F R+
Sbjct: 12 IVTSASGVIALLNEEETSLKLFGLEKLNAIVDVYWPELADSIFKIEELCEDEDFVG--RE 69
Query: 63 LAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIK 116
LA LL SK++++L + +++L YAL AG LF++ E S YV T+LAK I++Y I+
Sbjct: 70 LANLLASKIYFHLEKYSEALKYALCAGKLFNIKEKSQYVETMLAKCIEKYVEIR 123
Score = 214 (80.4 bits), Expect = 2.9e-151, Sum P(4) = 2.9e-151
Identities = 60/210 (28%), Positives = 115/210 (54%)
Query: 129 VDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLSYCIN--- 185
++ ++E +V+ M+D CI ++A+G+A++ RRLDK+E I ++N L++ IN
Sbjct: 181 INQKMELLVDEMIDVCIKSNDIKEALGVALDARRLDKVEYIIANAENKIEILAHSINNEK 240
Query: 186 ---VSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLRS 242
++ SF N ++L + +Y+++C+CL ++D+ + V IL KLL +
Sbjct: 241 HINMNKSFRNEYFKLLVNLYLSLSE-EELKT-EYINLCECLYYIDDYKKVAEILLKLLHN 298
Query: 243 ENKDDALLAFQIAFDLVENEHQAFLLNV----RDHLPVPKTQP------LQTVQPGSNDP 292
+ L+A+QI+FDLV+ E++ FL N+ +++L K + T Q +ND
Sbjct: 299 YH----LMAYQISFDLVDFENKIFLRNILGQIKENLIQNKAYYFGEEYFVTTPQEENNDA 354
Query: 293 PSAQNDSSTAEDVQMNEGTPASNVNVQDED 322
+ +N+S+ + Q +E +N +D+D
Sbjct: 355 DNKENESNAITNEQQDE----NNNEKEDKD 380
Score = 118 (46.6 bits), Expect = 2.9e-151, Sum P(4) = 2.9e-151
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 913 NPARVVPAQEKFIKFLEDSRYVPV-KSAPSGFVLLRDLRPNEP 954
NP RV+ QEK+I+++ +SRY+PV + SGF++L D+ P EP
Sbjct: 1102 NPCRVIKMQEKYIEYIPNSRYIPVLPTRKSGFIMLNDITPLEP 1144
Score = 48 (22.0 bits), Expect = 1.6e-110, Sum P(4) = 1.6e-110
Identities = 26/100 (26%), Positives = 44/100 (44%)
Query: 88 AGSLFDVSE---DSDYVH----TLLAKAI----DEYASIKSKAAESNDEAANVDPRLEAI 136
A S+F + E D D+V LLA I ++Y+ K A + N+ + +
Sbjct: 50 ADSIFKIEELCEDEDFVGRELANLLASKIYFHLEKYSEAL-KYALCAGKLFNIKEKSQ-Y 107
Query: 137 VERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNV 176
VE ML KCI + M I+ + + IT ++++
Sbjct: 108 VETMLAKCIEKYVEIREMQYDIDYNNQHNINDGITNNNDI 147
Score = 46 (21.3 bits), Expect = 3.0e-42, Sum P(4) = 3.0e-42
Identities = 15/68 (22%), Positives = 28/68 (41%)
Query: 592 RYGGMYALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALG-FVLYSEPEQTPRIV 650
++ +L + Y G N + H +DVS ++ + L +YSE +
Sbjct: 535 KFSATASLGVVYKGHVNESFMVLSTHLPYNDVSTEIANNINVGLAPSGVYSEGGSLYAL- 593
Query: 651 SLLSESYN 658
L+ +YN
Sbjct: 594 GLIHANYN 601
Score = 37 (18.1 bits), Expect = 1.1e-132, Sum P(4) = 1.1e-132
Identities = 7/38 (18%), Positives = 18/38 (47%)
Query: 286 QPGSNDPPSAQNDSSTAEDVQMNEGTPASNVNVQDEDP 323
Q N+ D++ ++ + N+ N N+ +++P
Sbjct: 368 QQDENNNEKEDKDNNDGKNPEHNDDNNKPNDNLTNDEP 405
>UNIPROTKB|Q8IKH3 [details] [associations]
symbol:PF14_0632 "26S proteasome subunit, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0050790 GO:GO:0004175 EMBL:AE014187 GO:GO:0006511
GO:GO:0042176 InterPro:IPR004155 SMART:SM00567 GO:GO:0005838
HOGENOM:HOG000189403 KO:K03032 Pfam:PF01851 RefSeq:XP_001348806.1
ProteinModelPortal:Q8IKH3 IntAct:Q8IKH3 MINT:MINT-1557099
PRIDE:Q8IKH3 EnsemblProtists:PF14_0632:mRNA GeneID:812214
KEGG:pfa:PF14_0632 EuPathDB:PlasmoDB:PF3D7_1466300 OMA:ANDENSH
ProtClustDB:CLSZ2733875 Uniprot:Q8IKH3
Length = 1172
Score = 933 (333.5 bits), Expect = 2.9e-151, Sum P(4) = 2.9e-151
Identities = 191/402 (47%), Positives = 268/402 (66%)
Query: 458 YALGLIHANHGEG---IKQFLRDSLRST-NVEVIQHXXXXXXXXX-XXXXXDEDIYDDIK 512
YALGLIHAN+ +K +L L+S N EV+QH DE+ YD++K
Sbjct: 591 YALGLIHANYNTNDKKVKNYLMSQLKSNMNDEVLQHGCCLGLGLVCLGDSNDENTYDELK 650
Query: 513 NVLYTDSAVAGEAAGISMGLLMVGTASEKA-GEMLTYAHETQHEKIIRGLALGIALTVYG 571
+LY+DSAVAGE+A ++GLL +G+ +K E+L YAH+TQHEKI R ++ + ++
Sbjct: 651 AILYSDSAVAGESAAYAIGLLKLGSGDDKCIDELLAYAHDTQHEKITRACSISLGFVMFQ 710
Query: 572 REEEADTLIEQMTRDQDPILRYGGMYALALAYSGTAN-NK-AIRQLLHFAVSDVSDDVRR 629
+E EAD+LIE++ D+D I+RYGGM+A+A+AY G +N NK I++LLHF+VSDVSDDVRR
Sbjct: 711 KEREADSLIEELVSDKDAIIRYGGMFAIAMAYCGLSNCNKHIIKKLLHFSVSDVSDDVRR 770
Query: 630 TAVLALGFVLYSEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAISLLEPLT 689
AV+ALGFVL + P Q P+ ++LL ESYNPHVRYGAALA+GI+C+ T EAI++L PL
Sbjct: 771 AAVIALGFVLCNSPNQVPKFLNLLIESYNPHVRYGAALALGIACSATANEEAINMLMPLL 830
Query: 690 SDVVDFVRQGALIAMAMVMVQINEANDSRVGTFRRQLEKIILDKHEDTMSKMGAILASGI 749
+D DFVRQ A I++ ++ Q NE + ++ ++ KI+ DKHED ++K GAI+++G+
Sbjct: 831 TDTTDFVRQSAFISLGLIFQQSNEHCNPNFKKYKEEIMKILSDKHEDIIAKFGAIVSAGL 890
Query: 750 LDAGGRNVTIRLLSKTKHD-KITAVVGLSVFSQFWYWYPLIYFISLSFSPTALIGLNYDL 808
LD GRN ++ + + A G +FSQ WYW+PLI+ ISL+F PT LIGL DL
Sbjct: 891 LDICGRNAISTFFTRRGNIIRPQAAAGFCLFSQLWYWFPLIHMISLTFMPTCLIGLTEDL 950
Query: 809 KVPR-FEFLSHAKPSLFEYPKPTTVPTTTSAVKLPAAVLSTS 849
KVP+ F LS + F+YP + T + AVLST+
Sbjct: 951 KVPKNFSILSTSNNQNFDYPSFLSKEKTQEKKETVTAVLSTT 992
Score = 407 (148.3 bits), Expect = 4.6e-81, Sum P(4) = 4.6e-81
Identities = 97/279 (34%), Positives = 151/279 (54%)
Query: 289 SNDPPSAQN-DSSTAEDVQMNEGTPASNVNVQD----ED-----PKEVIYAERLNKIKGI 338
+ND P+ N D D N+ +N+N + ED K+ I+ ++ K+ I
Sbjct: 401 TNDEPTYNNNDDKAINDGNDNDNNNNNNINNNNNNIVEDVLKYISKKHIFYNKMKKLLYI 460
Query: 339 LSGETSIQLTLQFLYSHNKSDLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFL 398
L+G+ + L ++FL+ +N +DL++L T K V+ R+S+ H + A+A+M GTT D FL
Sbjct: 461 LTGKVTGNLYIEFLHRNNHADLILLDTYKNIVDSRSSITHHGIVIAHALMQTGTTCDVFL 520
Query: 399 RENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMA---PXXXXXXXXXX-------- 447
R N++WLS+A NW KFSATA LGV+++GH+ + +++ P
Sbjct: 521 RSNIEWLSKAINWEKFSATASLGVVYKGHVNESFMVLSTHLPYNDVSTEIANNINVGLAP 580
Query: 448 XXXXXXXXXXYALGLIHANHGEG---IKQFLRDSLRST-NVEVIQHXXXXXXXXX-XXXX 502
YALGLIHAN+ +K +L L+S N EV+QH
Sbjct: 581 SGVYSEGGSLYALGLIHANYNTNDKKVKNYLMSQLKSNMNDEVLQHGCCLGLGLVCLGDS 640
Query: 503 XDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEK 541
DE+ YD++K +LY+DSAVAGE+A ++GLL +G+ +K
Sbjct: 641 NDENTYDELKAILYSDSAVAGESAAYAIGLLKLGSGDDK 679
Score = 259 (96.2 bits), Expect = 2.9e-151, Sum P(4) = 2.9e-151
Identities = 54/114 (47%), Positives = 80/114 (70%)
Query: 5 MVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPII--LYEDEEFDQHQRQ 62
+V+SA G++A+LNE SLKL L LN+ VD +WPE++ S+ I L EDE+F R+
Sbjct: 12 IVTSASGVIALLNEEETSLKLFGLEKLNAIVDVYWPELADSIFKIEELCEDEDFVG--RE 69
Query: 63 LAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIK 116
LA LL SK++++L + +++L YAL AG LF++ E S YV T+LAK I++Y I+
Sbjct: 70 LANLLASKIYFHLEKYSEALKYALCAGKLFNIKEKSQYVETMLAKCIEKYVEIR 123
Score = 214 (80.4 bits), Expect = 2.9e-151, Sum P(4) = 2.9e-151
Identities = 60/210 (28%), Positives = 115/210 (54%)
Query: 129 VDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLSYCIN--- 185
++ ++E +V+ M+D CI ++A+G+A++ RRLDK+E I ++N L++ IN
Sbjct: 181 INQKMELLVDEMIDVCIKSNDIKEALGVALDARRLDKVEYIIANAENKIEILAHSINNEK 240
Query: 186 ---VSHSFVNXXXXXXXXXXXXXXXXQKLPSPDYLSICQCLMFLDEPEGVVSILEKLLRS 242
++ SF N ++L + +Y+++C+CL ++D+ + V IL KLL +
Sbjct: 241 HINMNKSFRNEYFKLLVNLYLSLSE-EELKT-EYINLCECLYYIDDYKKVAEILLKLLHN 298
Query: 243 ENKDDALLAFQIAFDLVENEHQAFLLNV----RDHLPVPKTQP------LQTVQPGSNDP 292
+ L+A+QI+FDLV+ E++ FL N+ +++L K + T Q +ND
Sbjct: 299 YH----LMAYQISFDLVDFENKIFLRNILGQIKENLIQNKAYYFGEEYFVTTPQEENNDA 354
Query: 293 PSAQNDSSTAEDVQMNEGTPASNVNVQDED 322
+ +N+S+ + Q +E +N +D+D
Sbjct: 355 DNKENESNAITNEQQDE----NNNEKEDKD 380
Score = 118 (46.6 bits), Expect = 2.9e-151, Sum P(4) = 2.9e-151
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 913 NPARVVPAQEKFIKFLEDSRYVPV-KSAPSGFVLLRDLRPNEP 954
NP RV+ QEK+I+++ +SRY+PV + SGF++L D+ P EP
Sbjct: 1102 NPCRVIKMQEKYIEYIPNSRYIPVLPTRKSGFIMLNDITPLEP 1144
Score = 48 (22.0 bits), Expect = 1.6e-110, Sum P(4) = 1.6e-110
Identities = 26/100 (26%), Positives = 44/100 (44%)
Query: 88 AGSLFDVSE---DSDYVH----TLLAKAI----DEYASIKSKAAESNDEAANVDPRLEAI 136
A S+F + E D D+V LLA I ++Y+ K A + N+ + +
Sbjct: 50 ADSIFKIEELCEDEDFVGRELANLLASKIYFHLEKYSEAL-KYALCAGKLFNIKEKSQ-Y 107
Query: 137 VERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNV 176
VE ML KCI + M I+ + + IT ++++
Sbjct: 108 VETMLAKCIEKYVEIREMQYDIDYNNQHNINDGITNNNDI 147
Score = 46 (21.3 bits), Expect = 3.0e-42, Sum P(4) = 3.0e-42
Identities = 15/68 (22%), Positives = 28/68 (41%)
Query: 592 RYGGMYALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALG-FVLYSEPEQTPRIV 650
++ +L + Y G N + H +DVS ++ + L +YSE +
Sbjct: 535 KFSATASLGVVYKGHVNESFMVLSTHLPYNDVSTEIANNINVGLAPSGVYSEGGSLYAL- 593
Query: 651 SLLSESYN 658
L+ +YN
Sbjct: 594 GLIHANYN 601
Score = 37 (18.1 bits), Expect = 1.1e-132, Sum P(4) = 1.1e-132
Identities = 7/38 (18%), Positives = 18/38 (47%)
Query: 286 QPGSNDPPSAQNDSSTAEDVQMNEGTPASNVNVQDEDP 323
Q N+ D++ ++ + N+ N N+ +++P
Sbjct: 368 QQDENNNEKEDKDNNDGKNPEHNDDNNKPNDNLTNDEP 405
>CGD|CAL0003585 [details] [associations]
symbol:RPN2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0034515 "proteasome storage granule"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] [GO:0004175 "endopeptidase activity"
evidence=IEA] [GO:0030674 "protein binding, bridging" evidence=IEA]
[GO:0043248 "proteasome assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
CGD:CAL0003585 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 EMBL:AACQ01000070 EMBL:AACQ01000071 eggNOG:COG5116
KO:K03032 Pfam:PF01851 RefSeq:XP_716329.1 RefSeq:XP_716391.1
ProteinModelPortal:Q5A3L0 STRING:Q5A3L0 GeneID:3641945
GeneID:3642027 KEGG:cal:CaO19.12725 KEGG:cal:CaO19.5260
Uniprot:Q5A3L0
Length = 952
Score = 1352 (481.0 bits), Expect = 4.0e-138, P = 4.0e-138
Identities = 292/642 (45%), Positives = 392/642 (61%)
Query: 332 LNKIKGILSGETSIQLTLQFLYSHNKSDLLILKTIKQSVEMRNSVCHSATIYANAIMHAG 391
L KI ILSG + L FL+ +N +D+ IL K ++ R+S+ HSA +ANA MHAG
Sbjct: 283 LKKILNILSGVPTCDLDNTFLFKNNNADITILNKTKNLLDGRSSIFHSAVTFANAFMHAG 342
Query: 392 TTVDTFLRENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXX 451
TT D+F R+NL+WL RATNW+KFSATA LGVIH+G+L QGR+++ P
Sbjct: 343 TTDDSFFRKNLEWLGRATNWSKFSATAALGVIHKGNLSQGRTILKPYLPGSSGSANNKGG 402
Query: 452 XXXXXXYALGLIHANHGEGI----KQFLRDS---LRSTNVEVIQHXXXXXXXXXXXXXXD 504
+ALGLI A HG + K F+ D+ S ++++ H
Sbjct: 403 SL----FALGLIFAGHGREVIGTLKSFIDDNGNAAGSNDIDIQLHGAALGAGVAGMGSKS 458
Query: 505 EDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEKA-GEMLTYAHETQHEKIIRGLAL 563
E +Y+ +K VLY+DSA++ +AA + MGL+M+G+ +E+A +MLTYA ETQHE IIRGLA+
Sbjct: 459 ESLYESLKVVLYSDSAISSQAAALGMGLVMLGSGNEEAIKDMLTYALETQHENIIRGLAI 518
Query: 564 GIALTVYGREEEADTLIEQMTRDQDPILRYGGMYALALAYSGTANNKAIRQLLHFAVSDV 623
GIAL YGREE+AD +I+Q+ + ILRYGG + +ALAY+GT NN AI++LLHFAVSD
Sbjct: 519 GIALLSYGREEKADEIIDQLMNQESSILRYGGAFTIALAYAGTGNNNAIKKLLHFAVSDP 578
Query: 624 SDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAIS 683
SDDVRR +VL+LGF+L + P+IV LLS+S+NPHVRYG ALA+GISCAG AI
Sbjct: 579 SDDVRRASVLSLGFLLIRDYTAAPQIVKLLSQSHNPHVRYGTALALGISCAGRAYPAAIE 638
Query: 684 LLEPLTSDVVDFVRQGALIAMAMVMVQINEANDSRVGTFRRQLEKIILDKHEDTMSKMGA 743
+LEPLT D VDFVRQGAL+A +M+++Q NE +V F +Q I +KHED ++K GA
Sbjct: 639 VLEPLTKDAVDFVRQGALMASSMILIQQNEFIYPKVKEFTKQYADTIKNKHEDALAKFGA 698
Query: 744 ILASGILDAGGRNVTIRLL-SKTKHDKITAVVGLSVFSQFWYWYPLIYFISLSFSPTALI 802
LA GI+DAGGRN TI L S+T A+VGL++F Q WYW+PL +F+SLSF+PT++I
Sbjct: 699 TLAQGIIDAGGRNSTINLENSQTNTLNTKAIVGLTLFVQSWYWFPLAHFLSLSFAPTSII 758
Query: 803 GLN-YDLKVPRFEFLSHAKPSLFEYPKPTTVPTTTSAVKLPAAVLSTSXXXXXXXXXXXX 861
G+ DLK P+FE HA P F+YP KL AVLST+
Sbjct: 759 GVRGQDLKAPKFELNCHANPEYFQYPPKVEEAKEKQPDKLATAVLSTTAKAKTRAKKKQS 818
Query: 862 XXXXXXXXXXXT-DLSSAGK----GKSSNE---KDGDSMQVDXXXXXXXXXXXSFEILIN 913
D+ K K SN+ K+ V ++I N
Sbjct: 819 QKEGGDIKAEDKMDVDEETKPKVDAKESNDDEKKETKKQPVSDEPVTVRYARTPYKIS-N 877
Query: 914 PARVVPAQEKFIKFLEDSRYVPVKS--APSGFVLLRDLRPNE 953
+RV+P Q FI F++D R+VPV+ SG V+L+D +P E
Sbjct: 878 LSRVLPVQSNFISFIKDDRFVPVRKYRGSSGIVVLQDNKPEE 919
Score = 433 (157.5 bits), Expect = 3.2e-37, P = 3.2e-37
Identities = 181/686 (26%), Positives = 303/686 (44%)
Query: 8 SAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPII--LYEDEEFDQHQRQLAA 65
SA LA+L E +LK +ALS+LN VDQ W EI+ ++ + LYED+ FD+ ++LAA
Sbjct: 5 SAAPYLALLGEPDSTLKSYALSSLNQVVDQLWAEIANNITELEELYEDDSFDR--KELAA 62
Query: 66 LLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAESNDE 125
L++SKV+Y LG+ + ++ YAL AG+ F++ E S Y+ T++++ I+ Y S+ + + ND
Sbjct: 63 LVISKVYYNLGDFDAAVKYALYAGNEFNLEEKSQYMETIVSQCINLYNSLSQQ--KFNDS 120
Query: 126 AANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAI-----TRSDNVHGTL 180
+DPRL AI E+ML+KC+ + + ++G+A+E RLD +E + + +
Sbjct: 121 TTKIDPRLTAIFEKMLNKCLKANEVKLSLGVALESYRLDLVESILQDQIKNNEEQALNLI 180
Query: 181 SYCINVSHSFVNXXXXXXXXXXXXXXXXQKLPS-PDYLSICQCLMFLDEPEGVVSILEKL 239
+Y + S++ V+ L D+ +I + ++ L++ E V + ++L
Sbjct: 181 NYVLVCSNNTVSNTNFRVQVLNSLISLLLSLKKHQDFFTIIKIIVQLNDSELAVKLFQEL 240
Query: 240 LRSENKDDALLAFQIAFDLVENEHQAFLLNVRDHLPVPKTQPLQTVQPGSNDPPSAQNDS 299
+ ++N+D L+A+Q AFDLV Q L V + L SN + ++++
Sbjct: 241 I-NQNED--LIAYQAAFDLVNAASQELLDLVMEKL--------------SN---AKESEN 280
Query: 300 STAEDV-QMNEGTPASNVNVQDEDPKEVIYAERLNKIKGILSGETSI---QLTLQ--FLY 353
T + + + G P +++ LNK K +L G +SI +T F++
Sbjct: 281 GTLKKILNILSGVPTCDLDNTFLFKNNNADITILNKTKNLLDGRSSIFHSAVTFANAFMH 340
Query: 354 SHNKSDLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVD--TFLRENLDWLSRATNW 411
+ D K ++ N SAT A ++H G T L+ L S + N
Sbjct: 341 AGTTDDSFFRKNLEWLGRATNWSKFSATA-ALGVIHKGNLSQGRTILKPYLPGSSGSAN- 398
Query: 412 AKFSATAGLGVIHRGHLQQGRSLMAPXXXXXXXXXXXXXXXXXXXXYALGLIHANHG--- 468
K + LG+I GH ++ + ALG A G
Sbjct: 399 NKGGSLFALGLIFAGHGREVIGTLKSFIDDNGNAAGSNDIDIQLHGAALGAGVAGMGSKS 458
Query: 469 EGIKQFLRDSLRSTNVEVIQHXXXXXXXXXXXXXXDEDIYDDIKNVLYT--DSAVAGEAA 526
E + + L+ L S + Q +E I D + L T ++ + G A
Sbjct: 459 ESLYESLKVVLYSDSAISSQAAALGMGLVMLGSGNEEAIKDMLTYALETQHENIIRGLAI 518
Query: 527 GISMGLLMVGTASEKAGEMLTYAHETQHEKIIR-GLALGIALTVYG--REEEADTLIEQM 583
GI+ LL G EKA E++ Q I+R G A IAL G L+
Sbjct: 519 GIA--LLSYGR-EEKADEIIDQLMN-QESSILRYGGAFTIALAYAGTGNNNAIKKLLHFA 574
Query: 584 TRDQDPILRYGGMYALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEP 643
D +R + L+L + + A Q++ + VR LALG
Sbjct: 575 VSDPSDDVRRASV--LSLGFLLIRDYTAAPQIVKLLSQSHNPHVRYGTALALGISCAGRA 632
Query: 644 EQTP-RIVSLLSESYNPHVRYGAALA 668
++ L++ VR GA +A
Sbjct: 633 YPAAIEVLEPLTKDAVDFVRQGALMA 658
>WB|WBGene00004459 [details] [associations]
symbol:rpn-2 species:6239 "Caenorhabditis elegans"
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0005080 "protein kinase C binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0072686 "mitotic
spindle" evidence=IDA] [GO:0005938 "cell cortex" evidence=IDA]
[GO:0031965 "nuclear membrane" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0005886 GO:GO:0005938 GO:GO:0008340
GO:GO:0009792 GO:GO:0006915 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0002119 GO:GO:0031965
GO:GO:0000003 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GO:GO:0072686 EMBL:FO080630 RefSeq:NP_498346.2 RefSeq:NP_498347.3
ProteinModelPortal:Q18115 SMR:Q18115 IntAct:Q18115 MINT:MINT-210658
STRING:Q18115 PaxDb:Q18115 PRIDE:Q18115 EnsemblMetazoa:C23G10.4b.1
EnsemblMetazoa:C23G10.4b.2 EnsemblMetazoa:C23G10.4b.3 GeneID:175877
KEGG:cel:CELE_C23G10.4 UCSC:C23G10.4a.1 CTD:175877
WormBase:C23G10.4a WormBase:C23G10.4b eggNOG:COG5116
GeneTree:ENSGT00550000074915 HOGENOM:HOG000189403 InParanoid:Q18115
KO:K03032 OMA:CVENAEL NextBio:890112 Pfam:PF01851 Uniprot:Q18115
Length = 965
Score = 964 (344.4 bits), Expect = 2.9e-114, Sum P(2) = 2.9e-114
Identities = 211/649 (32%), Positives = 344/649 (53%)
Query: 319 QDEDPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKSDLLILKTIKQSVEMRNSVCH 378
Q +D ++ + + KI IL G +++ L F HN +D ++++ IK+++ R + H
Sbjct: 289 QQQDARD---EKSMEKIHSILKGHETVKAYLDFFVRHNHTDSVLMEEIKENI--RTASAH 343
Query: 379 SATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPX 438
+A + +N +M GTT D FLR NL+W+S+ATNW KF+A A LG+IH G ++ P
Sbjct: 344 NALLISNGLMQYGTTCDDFLRNNLNWVSKATNWNKFNAVASLGLIHHGQESSAMKVLEPY 403
Query: 439 XXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQF-LRDSLRSTNVEVIQHXXXXXXXX 497
Y GLIHA HG+ L L++ E ++H
Sbjct: 404 LPKESVEGFGFKEGGAMLAY--GLIHAKHGDATAMSTLAQWLKTAENEPVRHGACLGFGV 461
Query: 498 XXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEKA-GEMLTYAHETQHEK 556
Y+ ++ VL D AV+GE+AGI+MGL+M G +++ E+ Y +TQH+K
Sbjct: 462 AGLGSSSVSNYEKVREVLQRDEAVSGESAGIAMGLIMAGHLNQEVFNELKQYTVDTQHDK 521
Query: 557 IIRGLALGIALTVYGREEEADTLI-EQMTRDQDPILRYGGMYALALAYSGTANNKAIRQL 615
RG+ G+A +G + +A+ I E + +P+LR G+ L++AY+GT + +R+L
Sbjct: 522 TQRGIRTGLACAAFGLQGDAEPYIKEAIGAKSNPMLRSTGICMLSMAYAGTGSPDVVRRL 581
Query: 616 LHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAG 675
L +D + DV+R A + +GFVL +P V++L+E +N HVRYGAA+A+GI+CAG
Sbjct: 582 LEKVATDPNLDVKRYATIGIGFVLSKDPSTCLSYVAMLTEHFNGHVRYGAAMALGIACAG 641
Query: 676 TGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDSRVGTFRRQLEKIILDKHE 735
TG EAI+L+EP+ SD FVR+GAL+++A++M Q + +V FR+QL K I +K+E
Sbjct: 642 TGNMEAIALIEPMISDKEGFVRKGALLSLALIMCQQTDYTCPKVNGFRKQLLKKIGEKNE 701
Query: 736 DTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLSVFSQFWYWYPLIYFISLS 795
D++ K GAI+A G+LD GG+N + + + K + ++VG+ F W+W+ + +FI+L+
Sbjct: 702 DSLVKFGAIIAQGLLDIGGQNAAVTMQNSDKQPDMGSMVGMMCFLHGWFWHSMHFFIALA 761
Query: 796 FSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTVPTTTSAVKLPAAVLSTSXXXXXX 855
P+ L+ +N +LK+P +++ HA F YP K+ VLS +
Sbjct: 762 AKPSCLVMMNENLKIPVLDYICHANSQKFAYPPRAESKKDKDVKKIETVVLSITGKKNAS 821
Query: 856 XXXXXXXXXXXXXXXXXTDLSSAGKGKSSN----EKDGDSMQVDXXXXXXXXXXXSFEI- 910
+ ++A S++ + + M+VD +
Sbjct: 822 KKLIAEEKKRREAAASASSAAAAPSSSSTSGTAPAAEDEKMEVDQPGKSKKEKAPEKDTK 881
Query: 911 ----LINPARVVPAQEKFIKFLEDSRYVPVKSAPSGFVLLRDLRPNEPE 955
L NPARV+PAQ + I + Y P+K G +++ D E E
Sbjct: 882 PLHRLQNPARVIPAQRQLISISDARAYSPMKPLYKGGIIVADRVDKERE 930
Score = 183 (69.5 bits), Expect = 2.9e-114, Sum P(2) = 2.9e-114
Identities = 63/258 (24%), Positives = 117/258 (45%)
Query: 23 LKLHALSNLNSFVDQFWPEISTSVPII--LYEDEEFDQHQRQLAALLVSKVFYYLGELND 80
L L A ++ + V+ W E++ ++P + L ++ F +H AALLVSKV++ L +
Sbjct: 37 LVLKAFNDWDVLVNT-WFEVADALPAVEQLLDNNTFPEHSS--AALLVSKVYFCLEQYER 93
Query: 81 SLSYALGA------GSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAESNDEAANVDPRLE 134
+L +AL + + D++YV+ ++ AID Y ++ SK + + + +L
Sbjct: 94 ALEFALRGDFNVVPATRTGLGNDAEYVNKIIETAIDTYKTL-SK------QGSGIPQKLR 146
Query: 135 AIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITR--SDNVHGTLSYCINVSHSFVN 192
+++R++ + + + + + E L ++ AI+ +D + + + VN
Sbjct: 147 DLIDRIVARNLDKREIWFVISLGFETTNLAMIDRAISAMPADLTIKNQTTLVETLNRVVN 206
Query: 193 XXXXXXXXXXXXXXXXQ---KLPSPDYLSICQCLMFLDEPEGVVSILEKLLRSENKDDAL 249
+ K PSPD IC+C + D E + L+ K +
Sbjct: 207 GAFDRSFRFQVIDTVIKTYLKCPSPDMSKICECYVLTDNAEAAADTITSLIA---KSLST 263
Query: 250 LAFQIAFDLVENEHQAFL 267
A+QIAFDL E Q FL
Sbjct: 264 RAYQIAFDLYETASQGFL 281
>UNIPROTKB|Q18115 [details] [associations]
symbol:rpn-2 "26S proteasome non-ATPase regulatory subunit
1" species:6239 "Caenorhabditis elegans" [GO:0000502 "proteasome
complex" evidence=NAS] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 INTERPRO:IPR002015 GO:GO:0005886 GO:GO:0005938
GO:GO:0008340 GO:GO:0009792 GO:GO:0006915 GO:GO:0030234
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0002119
GO:GO:0031965 GO:GO:0000003 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 GO:GO:0072686 EMBL:FO080630 RefSeq:NP_498346.2
RefSeq:NP_498347.3 ProteinModelPortal:Q18115 SMR:Q18115
IntAct:Q18115 MINT:MINT-210658 STRING:Q18115 PaxDb:Q18115
PRIDE:Q18115 EnsemblMetazoa:C23G10.4b.1 EnsemblMetazoa:C23G10.4b.2
EnsemblMetazoa:C23G10.4b.3 GeneID:175877 KEGG:cel:CELE_C23G10.4
UCSC:C23G10.4a.1 CTD:175877 WormBase:C23G10.4a WormBase:C23G10.4b
eggNOG:COG5116 GeneTree:ENSGT00550000074915 HOGENOM:HOG000189403
InParanoid:Q18115 KO:K03032 OMA:CVENAEL NextBio:890112 Pfam:PF01851
Uniprot:Q18115
Length = 965
Score = 964 (344.4 bits), Expect = 2.9e-114, Sum P(2) = 2.9e-114
Identities = 211/649 (32%), Positives = 344/649 (53%)
Query: 319 QDEDPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKSDLLILKTIKQSVEMRNSVCH 378
Q +D ++ + + KI IL G +++ L F HN +D ++++ IK+++ R + H
Sbjct: 289 QQQDARD---EKSMEKIHSILKGHETVKAYLDFFVRHNHTDSVLMEEIKENI--RTASAH 343
Query: 379 SATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPX 438
+A + +N +M GTT D FLR NL+W+S+ATNW KF+A A LG+IH G ++ P
Sbjct: 344 NALLISNGLMQYGTTCDDFLRNNLNWVSKATNWNKFNAVASLGLIHHGQESSAMKVLEPY 403
Query: 439 XXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQF-LRDSLRSTNVEVIQHXXXXXXXX 497
Y GLIHA HG+ L L++ E ++H
Sbjct: 404 LPKESVEGFGFKEGGAMLAY--GLIHAKHGDATAMSTLAQWLKTAENEPVRHGACLGFGV 461
Query: 498 XXXXXXDEDIYDDIKNVLYTDSAVAGEAAGISMGLLMVGTASEKA-GEMLTYAHETQHEK 556
Y+ ++ VL D AV+GE+AGI+MGL+M G +++ E+ Y +TQH+K
Sbjct: 462 AGLGSSSVSNYEKVREVLQRDEAVSGESAGIAMGLIMAGHLNQEVFNELKQYTVDTQHDK 521
Query: 557 IIRGLALGIALTVYGREEEADTLI-EQMTRDQDPILRYGGMYALALAYSGTANNKAIRQL 615
RG+ G+A +G + +A+ I E + +P+LR G+ L++AY+GT + +R+L
Sbjct: 522 TQRGIRTGLACAAFGLQGDAEPYIKEAIGAKSNPMLRSTGICMLSMAYAGTGSPDVVRRL 581
Query: 616 LHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAG 675
L +D + DV+R A + +GFVL +P V++L+E +N HVRYGAA+A+GI+CAG
Sbjct: 582 LEKVATDPNLDVKRYATIGIGFVLSKDPSTCLSYVAMLTEHFNGHVRYGAAMALGIACAG 641
Query: 676 TGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDSRVGTFRRQLEKIILDKHE 735
TG EAI+L+EP+ SD FVR+GAL+++A++M Q + +V FR+QL K I +K+E
Sbjct: 642 TGNMEAIALIEPMISDKEGFVRKGALLSLALIMCQQTDYTCPKVNGFRKQLLKKIGEKNE 701
Query: 736 DTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLSVFSQFWYWYPLIYFISLS 795
D++ K GAI+A G+LD GG+N + + + K + ++VG+ F W+W+ + +FI+L+
Sbjct: 702 DSLVKFGAIIAQGLLDIGGQNAAVTMQNSDKQPDMGSMVGMMCFLHGWFWHSMHFFIALA 761
Query: 796 FSPTALIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTVPTTTSAVKLPAAVLSTSXXXXXX 855
P+ L+ +N +LK+P +++ HA F YP K+ VLS +
Sbjct: 762 AKPSCLVMMNENLKIPVLDYICHANSQKFAYPPRAESKKDKDVKKIETVVLSITGKKNAS 821
Query: 856 XXXXXXXXXXXXXXXXXTDLSSAGKGKSSN----EKDGDSMQVDXXXXXXXXXXXSFEI- 910
+ ++A S++ + + M+VD +
Sbjct: 822 KKLIAEEKKRREAAASASSAAAAPSSSSTSGTAPAAEDEKMEVDQPGKSKKEKAPEKDTK 881
Query: 911 ----LINPARVVPAQEKFIKFLEDSRYVPVKSAPSGFVLLRDLRPNEPE 955
L NPARV+PAQ + I + Y P+K G +++ D E E
Sbjct: 882 PLHRLQNPARVIPAQRQLISISDARAYSPMKPLYKGGIIVADRVDKERE 930
Score = 183 (69.5 bits), Expect = 2.9e-114, Sum P(2) = 2.9e-114
Identities = 63/258 (24%), Positives = 117/258 (45%)
Query: 23 LKLHALSNLNSFVDQFWPEISTSVPII--LYEDEEFDQHQRQLAALLVSKVFYYLGELND 80
L L A ++ + V+ W E++ ++P + L ++ F +H AALLVSKV++ L +
Sbjct: 37 LVLKAFNDWDVLVNT-WFEVADALPAVEQLLDNNTFPEHSS--AALLVSKVYFCLEQYER 93
Query: 81 SLSYALGA------GSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAESNDEAANVDPRLE 134
+L +AL + + D++YV+ ++ AID Y ++ SK + + + +L
Sbjct: 94 ALEFALRGDFNVVPATRTGLGNDAEYVNKIIETAIDTYKTL-SK------QGSGIPQKLR 146
Query: 135 AIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITR--SDNVHGTLSYCINVSHSFVN 192
+++R++ + + + + + E L ++ AI+ +D + + + VN
Sbjct: 147 DLIDRIVARNLDKREIWFVISLGFETTNLAMIDRAISAMPADLTIKNQTTLVETLNRVVN 206
Query: 193 XXXXXXXXXXXXXXXXQ---KLPSPDYLSICQCLMFLDEPEGVVSILEKLLRSENKDDAL 249
+ K PSPD IC+C + D E + L+ K +
Sbjct: 207 GAFDRSFRFQVIDTVIKTYLKCPSPDMSKICECYVLTDNAEAAADTITSLIA---KSLST 263
Query: 250 LAFQIAFDLVENEHQAFL 267
A+QIAFDL E Q FL
Sbjct: 264 RAYQIAFDLYETASQGFL 281
>POMBASE|SPBP19A11.03c [details] [associations]
symbol:mts4 "19S proteasome regulatory subunit Mts4"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR016024 InterPro:IPR016643 PIRSF:PIRSF015965
PomBase:SPBP19A11.03c INTERPRO:IPR002015 GO:GO:0005829
GO:GO:0005634 GO:GO:0007346 GO:GO:0030234 SUPFAM:SSF48371
GO:GO:0043161 EMBL:CU329671 GO:GO:0050790 GenomeReviews:CU329671_GR
GO:GO:0042176 GO:GO:0008540 Pfam:PF01851 eggNOG:COG5110
HOGENOM:HOG000176022 KO:K03028 OMA:IAQGLTH PANTHER:PTHR10943:SF1
EMBL:Y09819 PIR:T52488 RefSeq:NP_596171.1 ProteinModelPortal:P87048
IntAct:P87048 STRING:P87048 EnsemblFungi:SPBP19A11.03c.1
GeneID:2541268 KEGG:spo:SPBP19A11.03c OrthoDB:EOG4P8JSC
NextBio:20802380 Uniprot:P87048
Length = 891
Score = 197 (74.4 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 103/460 (22%), Positives = 184/460 (40%)
Query: 380 ATIYANAIMHAGTTVDTFLR---ENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMA 436
A + NA+++AG + D + E W+ + SATA +G++ ++ G SL+
Sbjct: 370 ANTFVNALVNAGYSNDRLILVDDEKTSWIYKNKESGLISATASIGLLQLWNVDMGLSLLD 429
Query: 437 PXXXXXXXXXXXXXXXXXXXXYALGLIHANHGEGIKQFLRDSLRSTNVEVIQHXXXXXXX 496
+ N + L + L + +V+ ++
Sbjct: 430 KYLYSSEENTKAGALLGIGVT---NVAVRNEADPAMAILSEYLETGSVK-LRASAILGLG 485
Query: 497 XXXXXXXDEDIYDDIKNVLY-TDSAVAGEA-AGISMGLLMVGTAS-EKAGEMLTYAHE-- 551
ED+ D + ++ TD + A +S+GL+ VGT + + A +L E
Sbjct: 486 LAYSGANREDLLDMLSPIVTDTDCPMQLSCLAALSLGLIFVGTCNGDVASTILQTLMERE 545
Query: 552 --TQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMYALALAYSGTANN 609
Q+++ R +ALG+AL G+++ AD +E + + I R + +Y+GT N
Sbjct: 546 ESAQNDQWGRFMALGLALLFNGKQDLADATVETLKAIEGKIARQAEILVDICSYAGTGNV 605
Query: 610 KAIRQLLHFAVSDVSDDVRRT-------AVLALGFVLYSEP---EQTPRIVSLLSESYNP 659
I++LLH SDD + + A L + + E E R + P
Sbjct: 606 LHIQKLLHICSEPPSDDAKESETTIQTFAALGVATIAMGEDIGAEMVLRHFDHMMHYGEP 665
Query: 660 HVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQINEANDSRV 719
+R LA+G+ A L + D V A+ AM +V + A R+
Sbjct: 666 SIRKAIPLALGLLSASNPQMRIFDTLSRYSHDNDLDVAYNAIFAMGLVGAGTSNA---RL 722
Query: 720 GTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTI-------RLLSKTKHDKI-T 771
RQL H+++ + +A G+L G +T+ ++L +T + T
Sbjct: 723 AQLLRQLASYY---HKESNALFMVRIAQGLLYLGKGTMTLNPYHTERQILGQTAFAGLMT 779
Query: 772 AVVGLSVFSQFW----YWYPLIYFISLSFSPTALIGLNYD 807
V+ + + F +W L+Y I+L+ P LI L D
Sbjct: 780 VVLAMLDANTFVLDTSHW--LLYAITLAIRPRMLITLGED 817
Score = 54 (24.1 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 26/87 (29%), Positives = 41/87 (47%)
Query: 40 PEISTSVPIILYEDEEFDQHQRQLAALL-VSKVFYYLGELNDSLSYALGAGSLFDVSE-D 97
P T V I Y+ + QLA +L V + Y ++SL Y L G D S
Sbjct: 102 PHYFTLVKI--YDSWPQSPQKTQLADILSVLGMSYSNTSKHESLKYRL-QGVTTDPSLWG 158
Query: 98 SDYVHTLLAKAIDEYASIKSKAAESND 124
+YV L ++ +E+AS + + A ++D
Sbjct: 159 HEYVRHLASEIEEEFASRQEEEAPTDD 185
>ASPGD|ASPL0000062698 [details] [associations]
symbol:AN10020 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
[GO:0030234 "enzyme regulator activity" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR016024 InterPro:IPR016643
PIRSF:PIRSF015965 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
EMBL:BN001308 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
Pfam:PF01851 OMA:IAQGLTH PANTHER:PTHR10943:SF1
EnsemblFungi:CADANIAT00002622 Uniprot:C8VQJ9
Length = 906
Score = 178 (67.7 bits), Expect = 3.3e-11, Sum P(3) = 3.3e-11
Identities = 77/311 (24%), Positives = 137/311 (44%)
Query: 526 AGISMGLLMVGTASEKAGEML--TYAHETQHEKI----IRGLALGIALTVYGREEEADTL 579
A +S+GL+ VG+++ + E + T E + +++ R +ALG+AL +GR+EE D +
Sbjct: 528 AAVSLGLVFVGSSNHQVSEAIATTLMDEERQKQLKDKWTRFMALGLALLYFGRQEEVDVI 587
Query: 580 IEQMTRDQDPILRYGGMYALALAYSGTANNKAIRQLLHFA--VSDVSDD------VRRTA 631
++ + P+ + + A A++GT +++LLH V + SD+ V+ A
Sbjct: 588 LDILKAVDHPMAKPTSVLASVCAWAGTGTVLKLQELLHICNDVIEESDEKQGEELVQSYA 647
Query: 632 VLALGFVLYSEPEQTPRIVSLLSE--SYNP-HVRYGAALAVGISCAGTGLSEAISLLEPL 688
VL L + E I+ Y ++R LA+G+ + L
Sbjct: 648 VLGLSLIAMGEDVGQDMILRQFGHLMHYGASNIRKAVPLAMGLISPSNPQMKVYDTLSRY 707
Query: 689 TSDVVDFVRQGALIAMAMVMVQINEANDSRVGTFRRQLEKIILDKHEDTMSKMGAILASG 748
+ D + V A+ AM + +SR+ RQL H D S +A G
Sbjct: 708 SHDNDNDVAINAIFAMGLCGAG---TKNSRLAQLLRQLASYY---HRDQNSLFMVRIAQG 761
Query: 749 ILDAGGRNVTI-------RLLSKTKH-DKITAVVGLSVFSQFWY--WYPLIYFISLSFSP 798
+L G +T+ ++LS+ +T +V L QF + L+YF+ + P
Sbjct: 762 LLHMGKGTMTLNPFHTDRQVLSRVSAAGLLTVLVSLIDAKQFILAEHHYLLYFLITAMYP 821
Query: 799 TALIGLNYDLK 809
L+ L+ DL+
Sbjct: 822 RFLVTLDEDLQ 832
Score = 61 (26.5 bits), Expect = 3.3e-11, Sum P(3) = 3.3e-11
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 928 LEDSRYVPVKSAPSGFVLLRDLRPNEPE 955
LED +Y+P+ S G V+LR PN E
Sbjct: 876 LEDEKYIPLSSTLEGLVILRK-NPNWEE 902
Score = 51 (23.0 bits), Expect = 3.3e-11, Sum P(3) = 3.3e-11
Identities = 26/100 (26%), Positives = 41/100 (41%)
Query: 269 NVRDHLPVPKTQPLQTVQP-GSNDPPSAQNDSSTAEDVQMNEGTPASNVNVQDEDPKEVI 327
+V+D L K +P + Q G Q + + ED Q+ +Q+ D +
Sbjct: 20 DVKD-LGGSKEKPEEKTQGNGKKKDDEPQEEELSEEDQQLKSELEMLVERLQEPDTS--L 76
Query: 328 YAERLNKIKGIL----SGETSIQLTLQFLYSHNKSDLLIL 363
Y L+ IK + S T++ L+FL H DL L
Sbjct: 77 YGPALDAIKTFIKTSTSSMTAVPKPLKFLRPHY-DDLAAL 115
>TAIR|locus:2121358 [details] [associations]
symbol:RPN1B "26S proteasome regulatory subunit S2 1B"
species:3702 "Arabidopsis thaliana" [GO:0000502 "proteasome
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0030234 "enzyme regulator activity" evidence=IEA] [GO:0042176
"regulation of protein catabolic process" evidence=IEA] [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=TAS]
[GO:0030163 "protein catabolic process" evidence=TAS] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 INTERPRO:IPR002015
GO:GO:0030234 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GO:GO:0030163 EMBL:AL021749 EMBL:AL161572 GO:GO:0042176
UniGene:At.13247 GO:GO:0008540 Pfam:PF01851 eggNOG:COG5110
HOGENOM:HOG000176022 KO:K03028 PANTHER:PTHR10943:SF1 OMA:QWNINEG
ProtClustDB:CLSN2688277 EMBL:AY230829 IPI:IPI00657061 PIR:T04617
RefSeq:NP_194576.5 UniGene:At.32013 ProteinModelPortal:Q6XJG8
SMR:Q6XJG8 IntAct:Q6XJG8 STRING:Q6XJG8 PaxDb:Q6XJG8 PRIDE:Q6XJG8
EnsemblPlants:AT4G28470.1 GeneID:828964 KEGG:ath:AT4G28470
TAIR:At4g28470 InParanoid:Q6XJG8 PhylomeDB:Q6XJG8
Genevestigator:Q6XJG8 Uniprot:Q6XJG8
Length = 891
Score = 168 (64.2 bits), Expect = 3.3e-10, Sum P(4) = 3.3e-10
Identities = 73/305 (23%), Positives = 131/305 (42%)
Query: 526 AGISMGLLMVGTASEKAGEMLTYA----HETQ-HEKIIRGLALGIALTVYGREEEADTLI 580
A +S+G++ VG+ +E+ + + +A E + E + R L LG+ L G++E +
Sbjct: 523 AALSLGMIYVGSCNEEVAQSIIFALMDRSEAELGEALTRFLPLGLGLLYLGKQESVEATA 582
Query: 581 EQMTRDQDPILRYGGMYALALAYSGTANNKAIRQLLHFAVSD-VSDDVRR-TAVLALGFV 638
E + I +Y M L+ AY+GT N ++ LL V D+ + AV+ L V
Sbjct: 583 EVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQDLLAQCGEHLVKGDIHQGPAVIGLAMV 642
Query: 639 LYSEP---EQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDF 695
SE + R + + + ++R LA+G+ C + L L+ D
Sbjct: 643 AMSEELGLDMEIRSLERVLQYGEQNIRRAVPLALGLLCISNPKVTVMDTLSRLSHDTDSE 702
Query: 696 VRQGALIAMAMVMVQINEANDSRVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGR 755
V A+I++ ++ N A R+ R L ++D +A G + G
Sbjct: 703 VAMAAIISLGLIGAGTNNA---RIAGMLRNLSSYY---YKDASLLFCVRIAQGFVHMGKG 756
Query: 756 NVTIR-------LLSKTKHDKITAVVG--LSVFSQFW--YWYPLIYFISLSFSPTALIGL 804
+T+ LLS T I ++ L + S Y Y ++YF+ L+ P ++ +
Sbjct: 757 LLTLNPFHSERLLLSPTALAGIVTLLHACLDMKSIILGKYHY-VLYFLVLAMQPRMMLTV 815
Query: 805 NYDLK 809
+ LK
Sbjct: 816 DQSLK 820
Score = 61 (26.5 bits), Expect = 3.3e-10, Sum P(4) = 3.3e-10
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 296 QNDSSTAEDVQMNEGTPASNVNVQDEDPK-EVIYAERLNK-IKGILSGETSIQLTLQFLY 353
+ + + ED+Q+ + VQD +P+ + I E + K I+ S TS+ L+FL
Sbjct: 35 KEEDLSEEDLQLKQNLELYVERVQDPNPELQKIALESMRKEIRDSTSSMTSVPKPLKFLR 94
Query: 354 SH 355
H
Sbjct: 95 PH 96
Score = 53 (23.7 bits), Expect = 2.0e-09, Sum P(4) = 2.0e-09
Identities = 26/108 (24%), Positives = 53/108 (49%)
Query: 76 GELNDSLSYALGAGSLFDV-SEDSDYVHTLLAKAIDEYASIKSKAAESNDEAANVDPRLE 134
GE +SL+Y L GS D+ S +YV L + EY +I+ E ++++ ++
Sbjct: 131 GE-RESLNYRLN-GSESDIGSWGHEYVRNLAGEIAKEY-TIRQ------GEESSIEDLMD 181
Query: 135 AIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLSY 182
+V++++ + +A+ + ++ LD L E + + N T +Y
Sbjct: 182 -LVQQIVSFHMKHNAETEAVDLLMDVEDLDLLLEHVDNT-NFRRTCNY 227
Score = 50 (22.7 bits), Expect = 3.3e-10, Sum P(4) = 3.3e-10
Identities = 21/61 (34%), Positives = 28/61 (45%)
Query: 379 SATIYANAIMHAGTTVDTFLRENLDWLS-RATNW-------AKFSATAGLGVIHRGHLQQ 430
SAT + NA ++AG D + D S A NW K SA A LG+I ++
Sbjct: 371 SAT-FVNAFVNAGFGQDKLMTVPSDSTSGSAGNWLFKNKEHGKTSAVASLGMIQLWDVET 429
Query: 431 G 431
G
Sbjct: 430 G 430
Score = 43 (20.2 bits), Expect = 3.3e-10, Sum P(4) = 3.3e-10
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 928 LEDSRYVPVKSAPSGFVLLRD 948
L +Y+P+ GFV+L++
Sbjct: 864 LATEKYIPLSPILEGFVILKE 884
>TAIR|locus:2046016 [details] [associations]
symbol:RPN1A "26S proteasome regulatory subunit S2 1A"
species:3702 "Arabidopsis thaliana" [GO:0000502 "proteasome
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS;IDA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0030163 "protein catabolic process"
evidence=TAS] [GO:0051726 "regulation of cell cycle" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0043130 "ubiquitin
binding" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0007010 "cytoskeleton organization" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051788
"response to misfolded protein" evidence=RCA] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 INTERPRO:IPR002015
GO:GO:0005829 GO:GO:0005886 GO:GO:0009506 GO:GO:0005634
GO:GO:0030234 EMBL:CP002685 GenomeReviews:CT485783_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GO:GO:0051726 GO:GO:0030163 GO:GO:0000502 GO:GO:0042176
GO:GO:0043130 EMBL:AC007048 Pfam:PF01851 eggNOG:COG5110
HOGENOM:HOG000176022 KO:K03028 OMA:IAQGLTH PANTHER:PTHR10943:SF1
EMBL:AY230828 EMBL:AF360216 EMBL:AY040061 EMBL:AK220903
IPI:IPI00529314 PIR:A84591 RefSeq:NP_565477.1 UniGene:At.22879
ProteinModelPortal:Q9SIV2 IntAct:Q9SIV2 STRING:Q9SIV2 PaxDb:Q9SIV2
PRIDE:Q9SIV2 EnsemblPlants:AT2G20580.1 GeneID:816580
KEGG:ath:AT2G20580 TAIR:At2g20580 InParanoid:Q9SIV2
PhylomeDB:Q9SIV2 ProtClustDB:CLSN2688277 Genevestigator:Q9SIV2
Uniprot:Q9SIV2
Length = 891
Score = 167 (63.8 bits), Expect = 6.7e-10, Sum P(4) = 6.7e-10
Identities = 73/306 (23%), Positives = 134/306 (43%)
Query: 526 AGISMGLLMVGTASEKAGEMLTYAHETQHEK-----IIRGLALGIALTVYGREEEADTLI 580
A +S+G++ VG+ +E+ + + +A + E + R L LG+ L G++E +
Sbjct: 523 ASLSLGMIYVGSCNEEVAQSIIFALMDRSEAELGDALTRFLPLGLGLLYLGKQESVEATA 582
Query: 581 EQMTRDQDPILRYGGMYALALAYSGTANNKAIRQLLHFAVSDVSD-DVRR-TAVLALGFV 638
E + I +Y M L+ AY+GT N ++ LL + D+ + AVL L V
Sbjct: 583 EVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQDLLAQCGEHLEKGDIHQGPAVLGLAMV 642
Query: 639 LYSEP---EQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDF 695
SE + R + + + ++R LA+G+ C + L L+ D
Sbjct: 643 AMSEELGVDMEIRSLERMLQYGEQNIRRAVPLALGLLCISNPKVTVMDTLSRLSHDTDSE 702
Query: 696 VRQGALIAMAMVMVQINEANDSRVGTFRRQLEKIILDKHEDTMSKMGAI-LASGILDAGG 754
V A+I++ ++ N A R+ R L ++D MS + + +A G++ G
Sbjct: 703 VAMSAIISLGLIGAGTNNA---RIAGMLRNLSSYY---YKD-MSLLFCVRIAQGLVHMGK 755
Query: 755 RNVTIR-------LLSKTKHDKIT----AVVGLSVFSQFWYWYPLIYFISLSFSPTALIG 803
+T+ LLS T I A + + Y Y ++YF+ L+ P ++
Sbjct: 756 GLLTLSPFHSERFLLSPTALAGIVTLLHACLDMKPIILGKYHY-VLYFLVLAMQPRMMLT 814
Query: 804 LNYDLK 809
++ +LK
Sbjct: 815 VDENLK 820
Score = 57 (25.1 bits), Expect = 1.6e-08, Sum P(4) = 1.6e-08
Identities = 20/78 (25%), Positives = 37/78 (47%)
Query: 284 TVQPGSNDPPSA---QNDSSTAEDVQMNEGTPASNVNVQDEDP---KEVIYAERLNKIKG 337
T++ S DP +++ + ED+++ + VQD +P K + + R +I+
Sbjct: 20 TLKVPSKDPKKKDEKKDEDLSEEDLELKQNLELYVERVQDPNPELQKAALESMR-QEIRA 78
Query: 338 ILSGETSIQLTLQFLYSH 355
S TS+ L+FL H
Sbjct: 79 STSSMTSVPKPLKFLRPH 96
Score = 55 (24.4 bits), Expect = 6.7e-10, Sum P(4) = 6.7e-10
Identities = 27/108 (25%), Positives = 52/108 (48%)
Query: 76 GELNDSLSYALGAGSLFDV-SEDSDYVHTLLAKAIDEYASIKSKAAESNDEAANVDPRLE 134
GE +SL + L G+ D+ S +YV L + EY +S E A++D +E
Sbjct: 131 GE-RESLRFRL-IGTEGDIGSWGHEYVRNLAGEIAQEYTKRQS-------EEASIDDLME 181
Query: 135 AIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAITRSDNVHGTLSY 182
+V++++ + +A+ + ++ LD L E + ++ N T +Y
Sbjct: 182 -LVQQIVAFHMKHNAETEAVDLLMDVEDLDLLLEHVDKT-NFKRTCNY 227
Score = 55 (24.4 bits), Expect = 6.7e-10, Sum P(4) = 6.7e-10
Identities = 28/128 (21%), Positives = 55/128 (42%)
Query: 318 VQDEDPKEVIYAERLNKIKGILSGETSIQLTLQFLYSHNKSDL----LILKTIKQSVEMR 373
V D+D +E + + +N K + G ++ ++ + + D+ L+ +
Sbjct: 307 VADDDDREALQ-DIVNNTK-LSEGYLTLARDIEVMEAKTPEDIYKAHLLDGRASSGASVD 364
Query: 374 NSVCHSATIYANAIMHAG------TTV--DTFLRENLDWLSRATNWAKFSATAGLGVIHR 425
++ + A + NA ++AG TV D+ + +WL + K SA A LG+I
Sbjct: 365 SARQNLAATFVNAFVNAGFGQDKLMTVPSDSTTGSSGNWLFKNKEHGKTSAAASLGMIQL 424
Query: 426 GHLQQGRS 433
+ G S
Sbjct: 425 WDVDSGLS 432
Score = 42 (19.8 bits), Expect = 6.7e-10, Sum P(4) = 6.7e-10
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 928 LEDSRYVPVKSAPSGFVLLRD 948
L +Y+P+ GF++L++
Sbjct: 864 LATDKYIPLSPILEGFIILKE 884
Score = 39 (18.8 bits), Expect = 1.6e-08, Sum P(4) = 1.6e-08
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 403 DWLSRATNWAKFSATAGLGVIHRGHLQ-QGRSLMAP 437
D++ + + + A GLG+ + G Q R+ ++P
Sbjct: 473 DYIDKEDSSVRIGAIMGLGISYAGSQNDQIRNKLSP 508
>DICTYBASE|DDB_G0293752 [details] [associations]
symbol:psmD2 "26S proteasome non-ATPase regulatory
subunit 2" species:44689 "Dictyostelium discoideum" [GO:0006972
"hyperosmotic response" evidence=IEP] [GO:0050790 "regulation of
catalytic activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 dictyBase:DDB_G0293752
INTERPRO:IPR002015 GO:GO:0005634 GO:GO:0030234
GenomeReviews:CM000155_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0050790 GO:GO:0006972 GO:GO:0004175
GO:GO:0006511 GO:GO:0042176 EMBL:AAFI02000219 GO:GO:0005838
Pfam:PF01851 eggNOG:COG5110 KO:K03028 PANTHER:PTHR10943:SF1
RefSeq:XP_628968.1 STRING:Q54BC6 PRIDE:Q54BC6
EnsemblProtists:DDB0232978 GeneID:8629396 KEGG:ddi:DDB_G0293752
OMA:QWNINEG ProtClustDB:CLSZ2429221 Uniprot:Q54BC6
Length = 893
Score = 160 (61.4 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 69/300 (23%), Positives = 126/300 (42%)
Query: 527 GISMGLLMVGTASEKAGEM----LTYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQ 582
G+++GL+ +G+ + + L E R L LG+ L G+++ A+ +E
Sbjct: 522 GLALGLIFIGSCDPELSTLFVQTLIQRGTAASESHARFLHLGLGLLYLGKQDAAELALET 581
Query: 583 MTRDQDPILRYGGMYALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSE 642
+ + Y + A AY+GT N ++ +LHF + AVL++ + E
Sbjct: 582 LKAIEGKGGEYARLTVEACAYAGTGNVLKVQNMLHFCSDGQENPHHGLAVLSIALIAMGE 641
Query: 643 P---EQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQG 699
+ R+ L + N H++ LA+G+ + +L L+ D V QG
Sbjct: 642 ELGSDMCLRMFDHLLQKGNVHIKRAIPLALGLLSPSNPRIAIMDILSKLSHDNDPEVAQG 701
Query: 700 ALIAMAMVMVQINEANDSRVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTI 759
A++++ ++ N A R+G R L + K + +A G+L G +TI
Sbjct: 702 AILSLGLIGAGTNNA---RIGGMLRALA-VFYGKD---VHLFFVRIAQGLLHLGKGTMTI 754
Query: 760 R-------LLSKTKHDKITAVV--GLSVFSQFWYWYPLIYF-ISLSFSPTALIGLNYDLK 809
L+S + A++ GL + + ++F I S P L+ L+ DLK
Sbjct: 755 NPYHSDRTLMSPVAVGGLLALLHAGLDIKNILSTQSHYLFFSIVCSMYPRMLMTLDEDLK 814
Score = 47 (21.6 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 21/93 (22%), Positives = 43/93 (46%)
Query: 296 QNDSSTAEDVQMNEGTPASNVNVQDEDPKEVIYA-ERLN-KIKGILSGETSIQLTLQFLY 353
+ ++ + ED ++ +DE + + A E L +I+ S TS+ L+FL
Sbjct: 51 KEETLSPEDEKLKNDLELLVERSRDEKEEIALAALEALKTEIRSSTSSMTSVPKPLKFLR 110
Query: 354 SHNKSDLLILKTIKQSVEMRNSVCHSATIYANA 386
+H + + I K K+ + + S+ ++ A A
Sbjct: 111 NHYSTLVDIYKNSKEG-KAKTSLADILSVLAMA 142
Score = 46 (21.3 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 27/111 (24%), Positives = 40/111 (36%)
Query: 288 GSNDPPSAQNDSSTAEDVQMNEGTPASNVNVQDEDPKEVIYAERLNKIKGILSGETSIQL 347
GSN +++ T E T N + +D KE + K+K L E ++
Sbjct: 15 GSNKEEDKKDNKDTEEKNTTTNTTTKDNKKDKKKDKKEETLSPEDEKLKNDL--ELLVER 72
Query: 348 TLQFLYSHNKSDLLILKT-IKQSVEMRNSVCHSATIYANAIMHAGTTVDTF 397
+ + L LKT I+ S SV N H T VD +
Sbjct: 73 SRDEKEEIALAALEALKTEIRSSTSSMTSVPKPLKFLRN---HYSTLVDIY 120
Score = 40 (19.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 13/50 (26%), Positives = 21/50 (42%)
Query: 32 NSFVDQFWPEISTSVPIILYEDEEFDQHQRQLAALLVSKVFYYLGELNDS 81
N V+ + VP + + E + L +SK+F Y+ E N S
Sbjct: 188 NQSVEDLLKLVDEIVPFQMTHNAEPEACDLLLEVEQLSKIFQYIDENNYS 237
>FB|FBgn0028695 [details] [associations]
symbol:Rpn1 "Regulatory particle non-ATPase 1" species:7227
"Drosophila melanogaster" [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0000022 "mitotic spindle elongation" evidence=IMP] [GO:0007052
"mitotic spindle organization" evidence=IMP] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 INTERPRO:IPR002015
GO:GO:0030234 EMBL:AE014296 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008283 GO:GO:0006508 GO:GO:0050790
GO:GO:0004175 GO:GO:0042176 GO:GO:0000022 GO:GO:0008540
BRENDA:3.4.25.1 Pfam:PF01851 eggNOG:COG5110
GeneTree:ENSGT00550000074983 KO:K03028 OMA:IAQGLTH
PANTHER:PTHR10943:SF1 CTD:6184 EMBL:AF132182 EMBL:AF145304
RefSeq:NP_649158.1 UniGene:Dm.3192 IntAct:Q9VW54 MINT:MINT-294744
STRING:Q9VW54 EnsemblMetazoa:FBtr0074893 GeneID:40174
KEGG:dme:Dmel_CG7762 UCSC:CG7762-RA FlyBase:FBgn0028695
InParanoid:Q9VW54 OrthoDB:EOG4R228T GenomeRNAi:40174 NextBio:817408
Uniprot:Q9VW54
Length = 919
Score = 90 (36.7 bits), Expect = 2.5e-06, Sum P(5) = 2.5e-06
Identities = 33/112 (29%), Positives = 54/112 (48%)
Query: 519 SAVAGEAAGI---SMGLLMVGTASEKAGEML--TYAHETQ---HEKIIRGLALGIALTVY 570
S+ + E GI S+GL+ VG+ + + E+L T T+ + R L LG+ L
Sbjct: 509 SSASVEILGITALSLGLISVGSCNSEITEILLQTIMGLTKADLKDTYTRFLFLGLGLLYL 568
Query: 571 GREEEADTLIEQMTRDQDPILRYGGMYALALAYSGTANNKAIRQLLHFAVSD 622
GR++ + ++ + ++P AY+GT N I+QLLH SD
Sbjct: 569 GRQKSTEAVMMTLEVLEEPYRSMATTMVDICAYAGTGNVLKIQQLLHIC-SD 619
Score = 74 (31.1 bits), Expect = 2.5e-06, Sum P(5) = 2.5e-06
Identities = 31/106 (29%), Positives = 52/106 (49%)
Query: 321 EDPKEVIYAERLNKIKGILSGETSIQ--LTLQFLYSHNKSDLLILKTIKQSVEMRNSVCH 378
+D E++ LNK L+ E I T + +Y KS L ++ S+++ ++ +
Sbjct: 311 DDLMEIMSNANLNKHFLNLARELDIMEPKTPEDIY---KSHLDNSRSRFASIQVDSAKQN 367
Query: 379 SATIYANAIMHAGTTVDTFLRENLD-WLSRATNWAKFSATAGLGVI 423
A + N ++AG VD L E+ + WL + SATA LG+I
Sbjct: 368 LAASFVNGFVNAGFGVDKLLSEDGNKWLYKNKEHGMLSATASLGLI 413
Score = 69 (29.3 bits), Expect = 2.5e-06, Sum P(5) = 2.5e-06
Identities = 20/63 (31%), Positives = 30/63 (47%)
Query: 627 VRRTAVLALGFVLYSEPE-QTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAISLL 685
+RR LALG + S P+ +S S + V + A A+G+ AGT + S+L
Sbjct: 697 IRRAVPLALGLISASNPKLNIIDTLSKFSHDSDAEVAHNAIFAMGLVGAGTNNARLASML 756
Query: 686 EPL 688
L
Sbjct: 757 RQL 759
Score = 62 (26.9 bits), Expect = 1.1e-05, Sum P(5) = 1.1e-05
Identities = 27/99 (27%), Positives = 37/99 (37%)
Query: 631 AVLALGFVLYSEP---EQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAISLLEP 687
AVL + + E E R L P +R LA+G+ A I L
Sbjct: 664 AVLGIALIAMGEDIGAEMAYRSFGNLLRYCEPAIRRAVPLALGLISASNPKLNIIDTLSK 723
Query: 688 LTSDVVDFVRQGALIAMAMVMVQINEANDSRVGTFRRQL 726
+ D V A+ AM +V N A R+ + RQL
Sbjct: 724 FSHDSDAEVAHNAIFAMGLVGAGTNNA---RLASMLRQL 759
Score = 54 (24.1 bits), Expect = 2.5e-06, Sum P(5) = 2.5e-06
Identities = 21/76 (27%), Positives = 35/76 (46%)
Query: 93 DVSEDSDYVHTLLAKAIDEYASIKSKAAESNDEAANVDPRLEAIVERMLDKCITDGKYQQ 152
D+ + D++H LL+ +DE A + + DP I+E L +Y Q
Sbjct: 202 DLLIEIDHLH-LLSDFVDESAYPRVCLYLQSCYPYVPDPDNTIILETALQLSRKFNQYTQ 260
Query: 153 AMGIAIECRRLDKLEE 168
AM +A+ +DK+ E
Sbjct: 261 AMRLALMLNDMDKIGE 276
Score = 40 (19.1 bits), Expect = 2.5e-06, Sum P(5) = 2.5e-06
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 57 DQHQRQLAALLVSKVFYYLGELNDSLSY 84
++ RQL A ++S + +G D L+Y
Sbjct: 113 NEQARQLCADIISVLSMTMGSGKDCLAY 140
>WB|WBGene00004458 [details] [associations]
symbol:rpn-1 species:6239 "Caenorhabditis elegans"
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 INTERPRO:IPR002015
GO:GO:0008340 GO:GO:0009792 GO:GO:0040007 GO:GO:0006915
GO:GO:0030234 SUPFAM:SSF48371 GO:GO:0002119 GO:GO:0000003
GO:GO:0050790 GO:GO:0000502 GO:GO:0042176 EMBL:FO080211
Pfam:PF01851 eggNOG:COG5110 GeneTree:ENSGT00550000074983
HOGENOM:HOG000176022 KO:K03028 OMA:IAQGLTH PANTHER:PTHR10943:SF1
PIR:T32707 RefSeq:NP_501064.1 ProteinModelPortal:Q9GZH5
IntAct:Q9GZH5 MINT:MINT-210711 STRING:Q9GZH5 PaxDb:Q9GZH5
EnsemblMetazoa:T22D1.9.1 EnsemblMetazoa:T22D1.9.2 GeneID:177455
KEGG:cel:CELE_T22D1.9 UCSC:T22D1.9.1 CTD:177455 WormBase:T22D1.9
InParanoid:Q9GZH5 NextBio:896900 Uniprot:Q9GZH5
Length = 981
Score = 131 (51.2 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 37/100 (37%), Positives = 58/100 (58%)
Query: 526 AGISMGLLMVGTA-SEKAGEMLTYAHETQHEKI----IRGLALGIALTVYGREEEADTLI 580
AG+S+GL++VGTA +E A EML + ++ +R LALGIAL ++++D +
Sbjct: 516 AGLSLGLILVGTADAEAAMEMLQALMDKSETELTDPNMRFLALGIALIFLQTQDKSDVFV 575
Query: 581 EQMTRDQDPILRYGGMYALAL---AYSGTANNKAIRQLLH 617
E + DP +G M + + AY+GT N I++LLH
Sbjct: 576 ESLRSLPDP---FGAMVSTLVEVCAYAGTGNVLKIQKLLH 612
Score = 64 (27.6 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 627 VRRTAVLALGFVLYSEPE-QTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAISLL 685
+RR LAL + S P+ +S S + + A A+G+ AGT + +++L
Sbjct: 745 IRRAVPLALSLLSVSNPQLNILETLSKFSHDSDADTAHNAIFAMGLVGAGTNNARLVAML 804
Query: 686 EPLTS 690
L S
Sbjct: 805 RNLAS 809
Score = 49 (22.3 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 17/78 (21%), Positives = 31/78 (39%)
Query: 357 KSDLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLD---WLSRATNWAK 413
KS L + S + ++ + A N ++ G VD + E + W + +
Sbjct: 336 KSHLEHSRPFGNSAQPDSTRMNLAAALVNGFVNCGFGVDKMMAETEEASRWFYKNKEYGM 395
Query: 414 FSATAGLGVIHRGHLQQG 431
+A A G+I R + G
Sbjct: 396 LTAAASQGLIWRWDIDTG 413
>CGD|CAL0006334 [details] [associations]
symbol:RPN1 species:5476 "Candida albicans" [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0034515 "proteasome storage granule"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] [GO:0030674 "protein binding, bridging"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 CGD:CAL0006334
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 GO:GO:0050790
GO:GO:0000502 EMBL:AACQ01000010 GO:GO:0042176 Pfam:PF01851
eggNOG:COG5110 KO:K03028 PANTHER:PTHR10943:SF1 RefSeq:XP_722167.1
STRING:Q5AL21 GeneID:3636147 KEGG:cal:CaO19.4956 Uniprot:Q5AL21
Length = 994
Score = 130 (50.8 bits), Expect = 7.7e-05, Sum P(3) = 7.7e-05
Identities = 56/262 (21%), Positives = 107/262 (40%)
Query: 380 ATIYANAIMHAGTTVDTFLR---ENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMA 436
A + N ++ G D ++ +N W+ R S TA LG IH+ ++ +G ++
Sbjct: 371 AASFVNGFLNLGFGNDKLVQTEEDNKSWIYRTKGSGMASTTASLGSIHQWNINEGLQVL- 429
Query: 437 PXXXXXXXXXXXXXXXXXXXXYALGLIHAN-HGEGIKQF--LRDSLRSTNVEVIQHXXXX 493
G++ AN H E F L++ + N ++ Q
Sbjct: 430 -----DKYTYSEDSEVKAGALLGTGVVSANVHDEVDAAFALLQEYVHEPN-KLYQTAAIN 483
Query: 494 XXXXXXXXXXDEDIYDDIKNVLYTDSAVAGEA---AGISMGLLMVGTA-SEKAGEMLTYA 549
+ED+ + + L +D ++ E A +++G + VGT + +L
Sbjct: 484 GLGIAFAGSANEDVLN-LLLPLVSDLDISLEISCLAALALGHIFVGTCHGDVTSTILQTL 542
Query: 550 HETQH----EKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMYALALAYSG 605
E + K I+ ++LG+ L GR E+A+ ++E + + PI + + A++G
Sbjct: 543 LERDYTQLTNKFIKFMSLGLGLLYMGRTEQAEDVLETIDAIEHPISKTLKVLVNICAFAG 602
Query: 606 TANNKAIRQLLHFAVSDVSDDV 627
T N I+ LL + D +
Sbjct: 603 TGNVLQIQALLQMCTAKPKDQL 624
Score = 63 (27.2 bits), Expect = 7.7e-05, Sum P(3) = 7.7e-05
Identities = 49/221 (22%), Positives = 86/221 (38%)
Query: 631 AVLALGFVLYSEP---EQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAISLLEP 687
AVL L + E + + R L N +R LA+G+ + L
Sbjct: 730 AVLGLACIAMGEDIGQDMSLRHFGHLMHYGNSLIRRAVPLAMGLVSTSNPQMKVFETLSR 789
Query: 688 LTSDVVDFVRQGALIAMAMVMVQINEANDSRVGTFRRQLEKIILDKHEDTMSKMGAILAS 747
+ D V Q ++ +M +V N A R+ RQL + K DT+ + +A
Sbjct: 790 YSHDPDLEVAQNSIYSMGLVGAGTNNA---RLAQLLRQLASYYI-KSPDTLFMVR--IAQ 843
Query: 748 GILDAGGRNVTIR-------LLSKTK-HDKITAVVGLSVFSQFWY-------WYPLIYFI 792
GIL G +T+ +LSK +T + L F + L+Y++
Sbjct: 844 GILHLGKGTLTLTPYNSERTILSKVSLASLLTIAIALLDPRSFILNDSTTETTHQLLYYL 903
Query: 793 SLSFSPTALIGLNYDLKVPRFEF-LSHAKPSLFEYPKPTTV 832
+ + P L+ ++ +LK + + A + + KP T+
Sbjct: 904 TPAVKPRMLVTVDEELKPIKVNVRVGQAVDVVGQAGKPKTI 944
Score = 37 (18.1 bits), Expect = 7.7e-05, Sum P(3) = 7.7e-05
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 118 KAAESNDEAANVDPRLEAIVERM 140
K E ++E ++ LE +VER+
Sbjct: 32 KEEELSEEDQHLKDELELLVERL 54
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.373 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1001 894 0.00087 122 3 11 22 0.41 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 33
No. of states in DFA: 616 (65 KB)
Total size of DFA: 383 KB (2189 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 76.84u 0.11s 76.95t Elapsed: 00:00:04
Total cpu time: 76.85u 0.11s 76.96t Elapsed: 00:00:04
Start: Tue May 21 07:53:04 2013 End: Tue May 21 07:53:08 2013