Query 001875
Match_columns 1001
No_of_seqs 423 out of 1966
Neff 7.7
Searched_HMMs 13730
Date Mon Mar 25 02:44:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001875.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/001875hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d3b7sa3 d.92.1.13 (A:209-460) 100.0 2.2E-40 1.6E-44 356.8 14.6 238 263-518 7-252 (252)
2 d3b7sa2 b.98.1.1 (A:1-208) Leu 100.0 3.4E-31 2.5E-35 276.0 21.0 194 16-254 13-208 (208)
3 d2vglb_ a.118.1.10 (B:) Adapti 94.5 2.2 0.00016 47.9 25.1 80 661-742 85-169 (579)
4 d1oyza_ a.118.1.16 (A:) Hypoth 93.3 4 0.00029 39.7 22.2 216 657-928 20-236 (276)
5 d1lsha1 a.118.4.1 (A:285-620) 91.1 0.32 2.3E-05 51.2 9.9 134 776-929 163-297 (336)
6 d1te4a_ a.118.1.16 (A:) MTH187 90.6 0.061 4.4E-06 46.8 2.9 107 667-814 3-109 (111)
7 d1b3ua_ a.118.1.2 (A:) Constan 89.6 1.1 7.9E-05 49.9 13.7 284 660-985 15-308 (588)
8 d2vgla_ a.118.1.10 (A:) Adapti 89.2 6.2 0.00045 43.9 19.9 302 659-999 103-437 (584)
9 d1b3ua_ a.118.1.2 (A:) Constan 87.5 0.32 2.3E-05 54.6 7.0 58 661-720 208-271 (588)
10 d1te4a_ a.118.1.16 (A:) MTH187 83.4 1.3 9.7E-05 37.6 7.6 56 663-722 29-84 (111)
11 d2vglb_ a.118.1.10 (B:) Adapti 77.4 7.8 0.00057 43.0 13.6 100 690-817 84-185 (579)
12 d1u4ga_ d.92.1.2 (A:) Elastase 75.9 6.7 0.00048 39.7 11.1 105 276-390 71-180 (298)
13 d1oyza_ a.118.1.16 (A:) Hypoth 74.0 35 0.0025 32.2 16.2 109 660-791 54-165 (276)
14 d1kjpa_ d.92.1.2 (A:) Thermoly 64.0 19 0.0014 36.6 11.5 105 276-388 68-180 (316)
15 d1q1sc_ a.118.1.1 (C:) Importi 61.1 23 0.0017 36.2 12.3 233 659-927 60-332 (434)
16 d1bqba_ d.92.1.2 (A:) Aureolys 60.5 17 0.0012 36.6 10.4 101 278-384 67-178 (301)
17 d1q1sc_ a.118.1.1 (C:) Importi 56.6 42 0.003 34.1 13.3 210 657-902 15-258 (434)
18 d2vgla_ a.118.1.10 (A:) Adapti 54.6 32 0.0023 37.7 12.4 244 666-927 150-414 (584)
19 d1u6gc_ a.118.1.2 (C:) Cullin- 50.1 1.3E+02 0.0095 35.0 18.1 31 689-721 45-75 (1207)
20 d1u6gc_ a.118.1.2 (C:) Cullin- 34.3 2.5E+02 0.018 32.2 17.1 134 848-991 145-285 (1207)
21 d1jdha_ a.118.1.1 (A:) beta-Ca 33.1 1.5E+02 0.011 30.7 13.4 130 665-819 236-386 (529)
22 d1jdha_ a.118.1.1 (A:) beta-Ca 31.7 2.3E+02 0.017 29.1 14.7 211 658-902 62-294 (529)
23 d1xqra1 a.118.1.21 (A:87-350) 25.3 59 0.0043 30.9 7.3 180 653-862 14-214 (264)
24 d1xm9a1 a.118.1.24 (A:244-700) 21.2 1.1E+02 0.008 30.1 8.9 73 663-737 9-97 (457)
No 1
>d3b7sa3 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=2.2e-40 Score=356.79 Aligned_cols=238 Identities=14% Similarity=0.234 Sum_probs=185.4
Q ss_pred CCeeEEEEccCchhHHHHHHHHHHHHHHHHHHHhCCCCCCCCccEEEeCCCC-cccccccccchhhccccccccccccch
Q 001875 263 QSLMSHICLPANVSKIHNTVEFFHNAFSHYETYLDAKFPFGSYKQVFLAPEM-AVSSSTFGAAMGIFSSQILYDEKVIDQ 341 (1001)
Q Consensus 263 ~~~v~~~~~p~~~~~~~~~~~~~~~~l~f~e~~~g~~YPf~k~~~V~Vp~~~-~~~~~~~gagL~i~~~~lL~~~~~~d~ 341 (1001)
+.+|++|++|+..+.++++++.+++++++||+++| ||||++|++|++|+++ .++|+++ |++++++.++..+..
T Consensus 7 g~~vrv~~~p~~~~~~~~~l~~~~~~l~~~e~~~g-~YP~~k~d~v~~~~~~~~ggmE~~--~l~~~~~~~~~~~~~--- 80 (252)
T d3b7sa3 7 GPRTLVWSEKEQVEKSAYEFSETESMLKIAEDLGG-PYVWGQYDLLVLPPSFPYGGMENP--CLTFVTPTLLAGDKS--- 80 (252)
T ss_dssp ETTEEEEECGGGHHHHHHHTTTHHHHHHHHHHHHC-CCCSSCCEEEECCTTCSSSEECCT--TEEEECGGGCCSSST---
T ss_pred CCceEEEEccchHHHHHHHHHHHHHHHHHHHHhCC-CCCchhcCEEEeCCCccccccccc--eeeeecchhccccch---
Confidence 56899999999999999999999999999999998 9999999999996443 3456654 567776655543321
Q ss_pred hhhhHHHHHHHHHHhhhcccccCCCCChhHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHhhhhhhhhcc--CCCccCCCC
Q 001875 342 AIDTSIKLSFALARQWFGVYITPELPNDEWLLDGLAGFLTDSFIKKFLGNNEARYRRYKANCAVCKADD--SGATALSSS 419 (1001)
Q Consensus 342 ~~~~~~~iaHELAHQWFG~lVt~~~w~d~WLnEGfA~Yl~~~~~~~~~G~~e~~~~~~~~~~~~~~~~~--~~~~~l~~~ 419 (1001)
...+||||+|||||||+||++||+|+||+||||+|++.+++++.+|.+..++.............+ ....++...
T Consensus 81 ---~~~~iaHE~aHqWfG~~Vt~~~w~~~WL~EG~a~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (252)
T d3b7sa3 81 ---LSNVIAHQISHSWTGNLVTNKTWDHFWLNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKL 157 (252)
T ss_dssp ---TTHHHHHHHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCGGGSS
T ss_pred ---HHHHHHHHHHHHHHhhhceeccccchHhhccHHHHHHHHhhccccchhhhhhhhhhhhhhHHHHHhhhhccCCccee
Confidence 234799999999999999999999999999999999999999999988765443332222111111 111121111
Q ss_pred CccccCCCCcccccccchhhhhHHHHHHHHHHhhc-hHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHhcCCCcccH
Q 001875 420 ASCKDLYGTQCIGIFGKIRSCKSVAILQMLEKQMG-SNFFRKILQNIISRAQGASPVRTLSTKEFRHFANKVGNLERPFL 498 (1001)
Q Consensus 420 ~~~~~~~~~~~~~~f~~i~Y~Kg~lVL~mLe~~lG-~e~F~~~L~~yl~~~~~~~~~~~lst~~F~~~~e~v~~~~~~dl 498 (1001)
.......++...|+.++|.||++||+||++.|| ++.|+++|+.|++++++++ +++++|.+.+++++ +.++
T Consensus 158 --~~~~~~~~~~~~f~~~~Y~Kga~vl~mL~~~iG~~~~f~~~lr~yl~~~~~~~----~~~~df~~~l~~~~---~~~~ 228 (252)
T d3b7sa3 158 --VVDLTDIDPDVAYSSVPYEKGFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKS----ITTDDWKDFLYSYF---KDKV 228 (252)
T ss_dssp --SCCCTTCCHHHHCSSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTEE----ECHHHHHHHHHHHT---GGGH
T ss_pred --eccccccchhhcccceeecchhHHHHHHHHHhccHHHHHHHHHHHHHHhCCCC----CCHHHHHHHHHHHh---cccc
Confidence 011112223456888999999999999999999 5789999999999999985 79999999999987 4577
Q ss_pred Hhh----hhhcccCCCcceEEEEE
Q 001875 499 KEF----FPRWVGTCGCPVLRMGF 518 (1001)
Q Consensus 499 ~~f----f~qWv~~~G~P~l~V~~ 518 (1001)
+.+ |++|++++|+|+|+|++
T Consensus 229 ~~~~~~~f~~W~~~~G~P~l~v~~ 252 (252)
T d3b7sa3 229 DVLNQVDWNAWLYSPGLPPIKPNY 252 (252)
T ss_dssp HHHTTSCHHHHHHCCSSCSSCCCC
T ss_pred chhhHhHHHHHhcCCCCCeeeccC
Confidence 777 99999999999998863
No 2
>d3b7sa2 b.98.1.1 (A:1-208) Leukotriene A4 hydrolase N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97 E-value=3.4e-31 Score=276.01 Aligned_cols=194 Identities=21% Similarity=0.318 Sum_probs=144.7
Q ss_pred CCCcEEEEEEEEEEEeccCcEEEEEEEEEEEc-CC-cceEEEecCCceeeEEEEcCeeeeeeeCCCCcccchhhhhhccc
Q 001875 16 NSGAVVRHQKLCLSIDMEKHQIYGYTELEIAV-PD-IGIVGLHAENLGIESVLVDGEPTEFEYYPHNHQNVENEKRWRSM 93 (1001)
Q Consensus 16 ~~~~~~~hy~l~L~id~~~~~~~G~v~I~i~~-~~-~~~I~L~a~~l~I~~V~v~g~~~~f~~~~~~~~~~~~~~~~~~~ 93 (1001)
.+.+++.||+|+|++|+++++|+|.|+|++.+ .+ ++.|.||+++|+|++|.+||+++.+++.... ..
T Consensus 13 ~~~~~v~Hy~L~l~~d~~~~~~~G~v~I~~~~~~~~~~~i~Ld~~~l~I~~v~~~g~~~~~~~~~~~-~~---------- 81 (208)
T d3b7sa2 13 ASVCRTKHLHLRCSVDFTRRTLTGTAALTVQSQEDNLRSLVLDTKDLTIEKVVINGQEVKYALGERQ-SY---------- 81 (208)
T ss_dssp TTTEEEEEEEEEEEEETTTTEEEEEEEEEEEECSTTEEEEEEEESSCEEEEEEETTEECCEEECCCC-GG----------
T ss_pred cccceEEEEEEEEEEcCCCCEEEEEEEEEEEECcCCccEeeeeccCCEEEEEEECCcccceEeccce-ee----------
Confidence 35679999999999999999999999999985 44 6899999999999999999999888765321 00
Q ss_pred cCCCCchHHHHHHHHHHhhhccCCCceEEeccCCCCCchhhhhhhhcccccCCCCccCCCcEEEEEEEEEecCCceeEee
Q 001875 94 VSSPSSAADAAAAVYISALERELVPNLLINCCKPFKGLTDQIEQMNLENKLDSSAEPKQNVKLVRIDYWVEKVEVGIHFD 173 (1001)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~l~~~~~~~L~I~~~~p~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~y~~~~p~~G~~F~ 173 (1001)
....|.|.++.+ +..|. .+.+.+.|.|.+.. .|++.+.|... +|- .
T Consensus 82 ----------------------~~~~l~i~~~~~---~~~g~---~~~l~i~y~~~~~~-~g~~~~~~~~~---~~~--~ 127 (208)
T d3b7sa2 82 ----------------------KGSPMEISLPIA---LSKNQ---EIVIEISFETSPKS-SALQWLTPEQT---SGK--E 127 (208)
T ss_dssp ----------------------GCEEEEEEEEEE---ECTTC---EEEEEEEEECCTTC-TTEEEECGGGS---SSS--S
T ss_pred ----------------------ccceeeeecccc---cCCCC---EEEEEEEEEEecCC-CCccEEeeecC---CCc--c
Confidence 001255543211 11111 12233444444332 12222221111 110 1
Q ss_pred eeeEeccCccCCcceEEeecCCCCCeeEEEEEEEEeCCeEEEEcCcccceeeccCCCCcEEEEEeccCCccceeeEEEEe
Q 001875 174 GNALHTDNQIRRARCWFPCIDDTTQRCCYDLEFTVSQNLIAVSAGSLLYQVLSKDDPPRKTYVYRLDVPVSAKWITLAVA 253 (1001)
Q Consensus 174 ~~~~~T~~ep~~AR~wFPC~D~p~~katf~l~Itvp~~~~avSnG~l~~~~~~~~~~~~kt~~F~~t~p~s~yliafaVG 253 (1001)
.++++||+||.+||+||||+|+|++||||+++|++|++|+++|||.+.+++..++++++++++|+.++|||+|++||+||
T Consensus 128 ~~~~~Tq~ep~~AR~~fPC~DeP~~Katf~l~i~~p~~~~~vsn~~~~~~~~~~~~~~~~~~~f~~t~pmstYL~af~vG 207 (208)
T d3b7sa2 128 HPYLFSQCQAIHCRAILPCQDTPSVKLTYTAEVSVPKELVALMSAIRDGETPDPEDPSRKIYKFIQKVPIPCYLIALVVG 207 (208)
T ss_dssp SCEEEECCTTTTGGGTSCBCCSTTCCEEEEEEEEEETTSEEEESSEEEEEEECTTCTTEEEEEEEEEEEECGGGCCEEEE
T ss_pred ceEEEEcCCCccceEEEEcCCCCCeeeEEEEEEEECCCCEEEeCCCcccceecccCCCcEEEEEeCCCCcchHheeEEEc
Confidence 46899999999999999999999999999999999999999999999877665567899999999999999999999999
Q ss_pred e
Q 001875 254 P 254 (1001)
Q Consensus 254 ~ 254 (1001)
-
T Consensus 208 ~ 208 (208)
T d3b7sa2 208 A 208 (208)
T ss_dssp S
T ss_pred C
Confidence 3
No 3
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.53 E-value=2.2 Score=47.91 Aligned_cols=80 Identities=18% Similarity=0.139 Sum_probs=51.5
Q ss_pred HHHHcc---cCChHHHHHHHHHHHcCCCCc--hhHHhHHHhhhccCcchhHHHHHHHHHHHhhcccccccccHHHHHHHH
Q 001875 661 INQLEK---DGDVVAQAQAIAALEALPHLS--FNVVNTLNNFLSDSKAFWRVRIEAAYALANTASEETDWAGLLHLVKFY 735 (1001)
Q Consensus 661 ~~QL~~---drdv~aq~eAi~~l~~~~~~s--~~~~~~L~~~l~d~~~f~~VR~~Aa~aL~~~~~~~~~~~g~~~L~~~f 735 (1001)
+..|++ |++-.-|.-|++.|....... ......|.+++.|+. ..||..||.+|+++....+.......++...
T Consensus 85 intl~kDl~d~n~~iR~lALr~L~~i~~~~i~~~l~~~l~~~L~D~~--p~VRk~Aa~~l~kl~~~~p~~~~~~~~~~~L 162 (579)
T d2vglb_ 85 VNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDED--PYVRKTAAVCVAKLHDINAQMVEDQGFLDSL 162 (579)
T ss_dssp HHHHGGGSSSSSHHHHHHHHHHHHTCCSGGGHHHHHHHHHHHSSCSC--HHHHHHHHHHHHHHHHSSCCCHHHHHHHHHH
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCc--HHHHHHHHHHHHHHhccChhhhhhhhHHHHH
Confidence 455544 678888999999999764332 224556778888875 4699999999999865433322233344444
Q ss_pred HhcCCCC
Q 001875 736 KSRRFDE 742 (1001)
Q Consensus 736 ~~~~~~~ 742 (1001)
++...++
T Consensus 163 ~~lL~D~ 169 (579)
T d2vglb_ 163 RDLIADS 169 (579)
T ss_dssp HHTTSCS
T ss_pred HHHHcCC
Confidence 4444443
No 4
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]}
Probab=93.30 E-value=4 Score=39.68 Aligned_cols=216 Identities=14% Similarity=0.019 Sum_probs=124.5
Q ss_pred hhHHHHHHcccCChHHHHHHHHHHHcCCCCchhHHhHHHhhhccCcchhHHHHHHHHHHHhhccccc-ccccHHHHHHHH
Q 001875 657 VQMWINQLEKDGDVVAQAQAIAALEALPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTASEET-DWAGLLHLVKFY 735 (1001)
Q Consensus 657 ~~m~~~QL~~drdv~aq~eAi~~l~~~~~~s~~~~~~L~~~l~d~~~f~~VR~~Aa~aL~~~~~~~~-~~~g~~~L~~~f 735 (1001)
+...+..+-.|+|-..+..|+++|.... +..+...|.+.+.|+. ..||..|+.+|++...... .-..+..|+...
T Consensus 20 ~~~~L~~~L~d~~~~vR~~A~~~L~~~~--~~~~~~~l~~~l~d~~--~~vr~~a~~aL~~l~~~~~~~~~~~~~l~~~~ 95 (276)
T d1oyza_ 20 NDDELFRLLDDHNSLKRISSARVLQLRG--GQDAVRLAIEFCSDKN--YIRRDIGAFILGQIKICKKCEDNVFNILNNMA 95 (276)
T ss_dssp CHHHHHHHTTCSSHHHHHHHHHHHHHHC--CHHHHHHHHHHHTCSS--HHHHHHHHHHHHHSCCCTTTHHHHHHHHHHHH
T ss_pred CHHHHHHHhcCCCHHHHHHHHHHHHhhC--CHhHHHHHHHHHcCCC--HHHHHHHHHHHHHhccccccccchHHHHHHHH
Confidence 3444556677999999999999999864 3457788999999874 7799999999998865432 122234444444
Q ss_pred HhcCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhhccccCCCChHHHHHHHHHHhhhcCCCCCCCchHHHHHHHHHHhhc
Q 001875 736 KSRRFDENIGLPRPNDFRDFSEYFVLEAIPHAVAMVRAADNKSPREAVEFVLQLLKYNDNNGNPYSDVFWLAALVQSVGE 815 (1001)
Q Consensus 736 ~~~~~~~~~~~p~~NdF~d~~~y~v~~ai~~a~a~~r~~~g~~p~~v~~fll~ll~~NdNs~N~ysD~~y~a~li~al~~ 815 (1001)
-+ ++ +..|+++...+|+.+...+....+.+.+.|...+. |. +..-+.+.+.+|+.
T Consensus 96 l~---d~--------------~~~vr~~a~~aL~~~~~~~~~~~~~~~~~l~~~~~--d~------~~~vr~~a~~~l~~ 150 (276)
T d1oyza_ 96 LN---DK--------------SACVRATAIESTAQRCKKNPIYSPKIVEQSQITAF--DK------STNVRRATAFAISV 150 (276)
T ss_dssp HH---CS--------------CHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHTT--CS------CHHHHHHHHHHHHT
T ss_pred hc---CC--------------ChhHHHHHHHHHHHHccccchhhHHHHHHHHHHhc--Cc------chHHHHHHHHHHhh
Confidence 32 11 13478888889988876665555666666666654 21 23355667778876
Q ss_pred cccccccHHHHHHHHHHHHHHHhcccccCCCCchhHHHHHHHHHHHHHHhcCCCChhhhhhhhccccCCCChHHHHHHHH
Q 001875 816 LEFGQQSILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRTLTQIALKLSGFISLDQVVKLIKPFRDFNTIWQVRVEAS 895 (1001)
Q Consensus 816 ~~~~~~~~~~~~~~~~ei~r~~~~d~~~psy~~~vt~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~vr~~a~ 895 (1001)
..-.. .+..+..++. .....+...+..++.... .+ ....+..++.. ....-..+|.+|.
T Consensus 151 ~~~~~--------~~~~l~~l~~------~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~--~~~~~~~~~~~~~ 209 (276)
T d1oyza_ 151 INDKA--------TIPLLINLLK------DPNGDVRNWAAFAININK---YD--NSDIRDCFVEM--LQDKNEEVRIEAI 209 (276)
T ss_dssp C---C--------CHHHHHHHHT------CSSHHHHHHHHHHHHHHT---CC--CHHHHHHHHHH--TTCSCHHHHHHHH
T ss_pred cchHH--------HHHHHHHhcc------cccchhhhhHHHHHHhhh---cc--ccccchhhhhh--hhhhhhhhhhhhc
Confidence 43211 1122222222 222233333434333221 11 11111111111 1233467999999
Q ss_pred HHhhccccccCChHHHHHHHHHHhccCCccchh
Q 001875 896 RALLDLEFHCNGIDSALSLFIKSVEEEPSLRGQ 928 (1001)
Q Consensus 896 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 928 (1001)
.++-.++. ..++..+++.++ ||.+|..
T Consensus 210 ~al~~~~~-----~~~~~~L~~~l~-d~~vr~~ 236 (276)
T d1oyza_ 210 IGLSYRKD-----KRVLSVLCDELK-KNTVYDD 236 (276)
T ss_dssp HHHHHTTC-----GGGHHHHHHHHT-SSSCCHH
T ss_pred cccchhhh-----hhhHHHHHHHhC-ChHHHHH
Confidence 98877532 345667777665 6676653
No 5
>d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]}
Probab=91.06 E-value=0.32 Score=51.25 Aligned_cols=134 Identities=15% Similarity=0.184 Sum_probs=82.0
Q ss_pred CCChHHHHHHHHHHhhhcCCCCCCCchHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHhccc-ccCCCCchhHHHH
Q 001875 776 NKSPREAVEFVLQLLKYNDNNGNPYSDVFWLAALVQSVGELEFGQQSILFLSSLLKRIDRLLQFDR-LMPSYNGILTISC 854 (1001)
Q Consensus 776 g~~p~~v~~fll~ll~~NdNs~N~ysD~~y~a~li~al~~~~~~~~~~~~~~~~~~ei~r~~~~d~-~~psy~~~vt~~~ 854 (1001)
..|+.++.+.|.+.|..-.+++ |..-+-..++||||+..+. +++-|..|+.-.. -......-|-+++
T Consensus 163 ~~~~~~~~~~l~~~l~~~~~~~----~~~~~~~~LkaLGN~g~p~--------~i~~l~~~l~~~~~~~~~~~~~vR~aA 230 (336)
T d1lsha1 163 VSCPDELLQPLHDLLSQSSDRA----KEEEIVLALKALGNAGQPN--------SIKKIQRFLPGQGKSLDEYSTRVQAEA 230 (336)
T ss_dssp SSCCGGGTHHHHHHHHHHHHTT----CHHHHHHHHHHHHHHTCGG--------GHHHHHTTSTTSSSCCCCSCHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHhhccc----chHHHHHHHHHHhccCCHh--------HHHHHHHHhcccccccccccHHHHHHH
Confidence 4466666666666665433333 3345667799999987532 2444454443221 2233455677888
Q ss_pred HHHHHHHHHHhcCCCChhhhhhhhccccCCCChHHHHHHHHHHhhccccccCChHHHHHHHHHHhccCCccchhh
Q 001875 855 IRTLTQIALKLSGFISLDQVVKLIKPFRDFNTIWQVRVEASRALLDLEFHCNGIDSALSLFIKSVEEEPSLRGQV 929 (1001)
Q Consensus 855 l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~vr~~a~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 929 (1001)
+.+|.+++ ...|......++.-|.+......||++|+-.|++ +....+.|.-+...+..||+...+.
T Consensus 231 i~Alr~~~----~~~p~~v~~~l~~i~~n~~e~~EvRiaA~~~lm~----t~P~~~~l~~i~~~l~~E~~~QV~s 297 (336)
T d1lsha1 231 IMALRNIA----KRDPRKVQEIVLPIFLNVAIKSELRIRSCIVFFE----SKPSVALVSMVAVRLRREPNLQVAS 297 (336)
T ss_dssp HHTTTTGG----GTCHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHH----TCCCHHHHHHHHHHHTTCSCHHHHH
T ss_pred HHHHHHhh----hcCcHHHHHHHHHHHcCCCCChHHHHHHHHHHHh----cCCCHHHHHHHHHHHHhCcHHHHHH
Confidence 88887753 2223321111233355666678999999999998 5333467888888899999866543
No 6
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=90.57 E-value=0.061 Score=46.76 Aligned_cols=107 Identities=19% Similarity=0.224 Sum_probs=71.1
Q ss_pred cCChHHHHHHHHHHHcCCCCchhHHhHHHhhhccCcchhHHHHHHHHHHHhhcccccccccHHHHHHHHHhcCCCCCCCC
Q 001875 667 DGDVVAQAQAIAALEALPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTASEETDWAGLLHLVKFYKSRRFDENIGL 746 (1001)
Q Consensus 667 drdv~aq~eAi~~l~~~~~~s~~~~~~L~~~l~d~~~f~~VR~~Aa~aL~~~~~~~~~~~g~~~L~~~f~~~~~~~~~~~ 746 (1001)
|+|-.-|..|+.+|.+.... ....|.+.|.|+ .+.||..|+.+|+.+..+. .++.|++.++.. +
T Consensus 3 D~~~~VR~~A~~aL~~~~~~---~~~~L~~~l~d~--~~~vR~~a~~~L~~~~~~~----~~~~L~~~l~d~----~--- 66 (111)
T d1te4a_ 3 DENKWVRRDVSTALSRMGDE---AFEPLLESLSNE--DWRIRGAAAWIIGNFQDER----AVEPLIKLLEDD----S--- 66 (111)
T ss_dssp SSCCCSSSSCCSSTTSCSST---THHHHHHGGGCS--CHHHHHHHHHHHGGGCSHH----HHHHHHHHHHHC----C---
T ss_pred CcCHHHHHHHHHHHHHhCHH---HHHHHHHHHcCC--CHHHHHHHHHHHHhcchhh----hHHHHHhhhccc----h---
Confidence 44444566777777765432 356778888775 5789999999999877543 366777777641 1
Q ss_pred CCCCCCCChHHHHHHHHHHHHHhhccccCCCChHHHHHHHHHHhhhcCCCCCCCchHHHHHHHHHHhh
Q 001875 747 PRPNDFRDFSEYFVLEAIPHAVAMVRAADNKSPREAVEFVLQLLKYNDNNGNPYSDVFWLAALVQSVG 814 (1001)
Q Consensus 747 p~~NdF~d~~~y~v~~ai~~a~a~~r~~~g~~p~~v~~fll~ll~~NdNs~N~ysD~~y~a~li~al~ 814 (1001)
..|+.+...||+.+. ++++...|..+|+.. | ..-+.+.+.+|.
T Consensus 67 -----------~~VR~~a~~aL~~i~------~~~~~~~L~~ll~d~----~----~~vr~~A~~aL~ 109 (111)
T d1te4a_ 67 -----------GFVRSGAARSLEQIG------GERVRAAMEKLAETG----T----GFARKVAVNYLE 109 (111)
T ss_dssp -----------THHHHHHHHHHHHHC------SHHHHHHHHHHTTSC----C----THHHHHHHHHGG
T ss_pred -----------hHHHHHHHHHHHHhC------ccchHHHHHHHHcCC----C----HHHHHHHHHHHH
Confidence 137888888998874 467788888887511 1 235666666664
No 7
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.65 E-value=1.1 Score=49.94 Aligned_cols=284 Identities=14% Similarity=0.080 Sum_probs=137.7
Q ss_pred HHHHHcccCChHHHHHHHHHHHcCC--CCch----hHHhHHHhhhccCcchhHHHHHHHHHHHhhcccccccccHHHHHH
Q 001875 660 WINQLEKDGDVVAQAQAIAALEALP--HLSF----NVVNTLNNFLSDSKAFWRVRIEAAYALANTASEETDWAGLLHLVK 733 (1001)
Q Consensus 660 ~~~QL~~drdv~aq~eAi~~l~~~~--~~s~----~~~~~L~~~l~d~~~f~~VR~~Aa~aL~~~~~~~~~~~g~~~L~~ 733 (1001)
++..|+ +.|+..|+.|++.|.... -+.. ...-.|.+++.|+. .||.++|.+|+++......-.-...|+.
T Consensus 15 l~~~l~-~~~~~~R~~a~~~l~~ia~~lg~~~~~~~lip~l~~~~~~~~---ev~~~~~~~l~~~~~~~~~~~~~~~ll~ 90 (588)
T d1b3ua_ 15 LIDELR-NEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDED---EVLLALAEQLGTFTTLVGGPEYVHCLLP 90 (588)
T ss_dssp HHHHTT-CSCHHHHHHHHHTHHHHHHHSCHHHHHHTHHHHHHHTCCCCH---HHHHHHHHHHTTCSGGGTSGGGGGGGHH
T ss_pred HHHHhc-CCCHHHHHHHHHHHHHHHHHhCcHhhHHHHHHHHHHHhcCcH---HHHHHHHHHHHHHHHHcCChhHHHHHHH
Confidence 567776 479999999999887431 1111 23345777777765 6999999999987643211111234445
Q ss_pred HHHhcCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhhccccCCCChHHHHHHHHHHhh-hcCCCCCCCchHHHHHHHHHH
Q 001875 734 FYKSRRFDENIGLPRPNDFRDFSEYFVLEAIPHAVAMVRAADNKSPREAVEFVLQLLK-YNDNNGNPYSDVFWLAALVQS 812 (1001)
Q Consensus 734 ~f~~~~~~~~~~~p~~NdF~d~~~y~v~~ai~~a~a~~r~~~g~~p~~v~~fll~ll~-~NdNs~N~ysD~~y~a~li~a 812 (1001)
.+....++++ -.|+.+...++..+-. ...+.++...|+.+++ -.++ +.+. .+.+....
T Consensus 91 ~l~~l~~~~~--------------~~Vr~~a~~~l~~i~~--~~~~~~~~~~l~p~i~~L~~~--~~~~---~r~~a~~l 149 (588)
T d1b3ua_ 91 PLESLATVEE--------------TVVRDKAVESLRAISH--EHSPSDLEAHFVPLVKRLAGG--DWFT---SRTSACGL 149 (588)
T ss_dssp HHHHHTTSSC--------------HHHHHHHHHHHHHHHT--TSCHHHHHHTHHHHHHHHHTC--SSHH---HHHHHGGG
T ss_pred HHHHHccCCC--------------HHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHHHhcc--cchH---HHHHHHHH
Confidence 5554433332 2367777777777743 3356776666665543 1111 1111 23332222
Q ss_pred hhccccccccHHHHHHHHHHHHHHHhcccccCCCCchhHHHHHHHHHHHHHHhcCCCChhhhhhhhccccCCCChHHHHH
Q 001875 813 VGELEFGQQSILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRTLTQIALKLSGFISLDQVVKLIKPFRDFNTIWQVRV 892 (1001)
Q Consensus 813 l~~~~~~~~~~~~~~~~~~ei~r~~~~d~~~psy~~~vt~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~vr~ 892 (1001)
++.+. ..-+......++..+.++.+ .-...|-.++.+++..++.......-.+.+..++.... .+....||.
T Consensus 150 l~~~~-~~~~~~~~~~l~~~~~~l~~------D~~~~VR~~a~~~l~~~~~~~~~~~~~~~l~~~l~~l~-~d~~~~vr~ 221 (588)
T d1b3ua_ 150 FSVCY-PRVSSAVKAELRQYFRNLCS------DDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLA-SDEQDSVRL 221 (588)
T ss_dssp HHHHT-TTSCHHHHHHHHHHHHHHHT------CSCHHHHHHHHHHHHHHHHTSCHHHHHHTHHHHHHHHH-TCSCHHHHT
T ss_pred HHHHH-HHhhHHHHHHHHHHHHHHhc------cCCHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHh-cCCchhhHH
Confidence 33221 11112223334333333322 22344555666777766432111100111222222322 244578999
Q ss_pred HHHHHhhccccccCChH---HHHHHHHHHhccCCccchhhHHHHhhhccchhccCCCCCCCcCcHHHHHHHHHHhccccc
Q 001875 893 EASRALLDLEFHCNGID---SALSLFIKSVEEEPSLRGQVKLGIHAMRICQIKGGSDSNHEVDTVTLVALLNLLESRIAF 969 (1001)
Q Consensus 893 ~a~~~l~~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 969 (1001)
+|+++|..+........ ..+..+. .+-+|++.+.+..++.....++..- +. .+....++..+-.+.+ .
T Consensus 222 ~a~~~l~~i~~~~~~~~~~~~i~~~l~-~~~~D~~~~Vr~~~~~~l~~l~~~~-~~----~~~~~~l~~~l~~ll~---d 292 (588)
T d1b3ua_ 222 LAVEACVNIAQLLPQEDLEALVMPTLR-QAAEDKSWRVRYMVADKFTELQKAV-GP----EITKTDLVPAFQNLMK---D 292 (588)
T ss_dssp THHHHHHHHHHHSCHHHHHHHTHHHHH-HHHTCSSHHHHHHHHHTHHHHHHHH-CH----HHHHHTHHHHHHHHHT---C
T ss_pred HHHHHHHHhhccCCHHHHHHHHHHHHH-HhcccccHHHHHHHHHhHHHHHHHh-hh----hhhhhhhhHHHHHHHh---c
Confidence 99999998754332111 1222333 3346777665432222222222211 11 1223345555555444 2
Q ss_pred cchhhhhhHHHHHHHH
Q 001875 970 NNVFLRHHLFGILQIL 985 (1001)
Q Consensus 970 ~~~~lr~~~~~~~~~l 985 (1001)
.+...|..+...+..+
T Consensus 293 ~~~~vr~~a~~~l~~~ 308 (588)
T d1b3ua_ 293 CEAEVRAAASHKVKEF 308 (588)
T ss_dssp SSHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHH
Confidence 3556666555544433
No 8
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment {Mouse (Mus musculus) [TaxId: 10090]}
Probab=89.21 E-value=6.2 Score=43.91 Aligned_cols=302 Identities=14% Similarity=0.129 Sum_probs=145.3
Q ss_pred HHHHHHcc---cCChHHHHHHHHHHHcCCCCch--hHHhHHHhhhccCcchhHHHHHHHHHHHhhccccccc---c-cHH
Q 001875 659 MWINQLEK---DGDVVAQAQAIAALEALPHLSF--NVVNTLNNFLSDSKAFWRVRIEAAYALANTASEETDW---A-GLL 729 (1001)
Q Consensus 659 m~~~QL~~---drdv~aq~eAi~~l~~~~~~s~--~~~~~L~~~l~d~~~f~~VR~~Aa~aL~~~~~~~~~~---~-g~~ 729 (1001)
|-++.|++ +++..-+--|++.|......+. .....+.+.+......--||..||.+|.++....++- . -++
T Consensus 103 L~iNtl~KDL~s~n~~ir~lALr~L~~i~~~~i~~~l~~~V~k~l~~~d~~p~VRk~A~l~l~ki~~~~pd~~~~~~~~~ 182 (584)
T d2vgla_ 103 LINNAIKNDLASRNPTFMGLALHCIANVGSREMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLVPMGDWTS 182 (584)
T ss_dssp HHHHHHHHHHHSCCHHHHHHHHHHHHHHCCHHHHHHHTTHHHHHHHCSSSCHHHHHHHHHHHHHHHHHCGGGCCCCSCHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHHHHHhChhhhhhhhHHH
Confidence 45666653 7889999999999987643321 1223344444433345669999999999875432211 1 134
Q ss_pred HHHHHHHhcCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhhccccC----CCChHHHHHHHHHHhhhcCCCCCCC-----
Q 001875 730 HLVKFYKSRRFDENIGLPRPNDFRDFSEYFVLEAIPHAVAMVRAAD----NKSPREAVEFVLQLLKYNDNNGNPY----- 800 (1001)
Q Consensus 730 ~L~~~f~~~~~~~~~~~p~~NdF~d~~~y~v~~ai~~a~a~~r~~~----g~~p~~v~~fll~ll~~NdNs~N~y----- 800 (1001)
.|.+.. .+++ .-|..+...++..+-..+ ....+.....|..++....|....|
T Consensus 183 ~L~~lL----~D~d--------------~~V~~aAl~ll~eI~~~~p~~~~~~~~~~i~~L~~ll~~~~~~~~~~~~~~~ 244 (584)
T d2vgla_ 183 RVVHLL----NDQH--------------LGVVTAATSLITTLAQKNPEEFKTSVSLAVSRLSRIVTSASTDLQDYTYYFV 244 (584)
T ss_dssp HHHHHT----TCSC--------------HHHHHHHHHHHHHHHHHCHHHHTTHHHHHHHHHHHHHHCCSSSCSTTEETTE
T ss_pred HHHHHh----cCCC--------------hhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhhcccchHHHHHhhc
Confidence 443333 2222 124444445554443222 1234456666777776555544333
Q ss_pred chHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHhc-ccccCCCC-------chhHHHHHHHHHHHHHHhcCCCC-h
Q 001875 801 SDVFWLAALVQSVGELEFGQQSILFLSSLLKRIDRLLQF-DRLMPSYN-------GILTISCIRTLTQIALKLSGFIS-L 871 (1001)
Q Consensus 801 sD~~y~a~li~al~~~~~~~~~~~~~~~~~~ei~r~~~~-d~~~psy~-------~~vt~~~l~~~~~l~~~~~~~~~-~ 871 (1001)
.+.+-...+++.+....... +......+.+.++..++. +....+-. ..|...|++.+..+ ..... .
T Consensus 245 ~~~~lq~~il~ll~~l~~~~-~~~~~~~l~~~l~~Il~~~~~~~~~~~~~~~~~~~aVl~e~i~~i~~~----~~~~~~~ 319 (584)
T d2vgla_ 245 PAPWLSVKLLRLLQCYPPPE-DPAVRGRLTECLETILNKAQEPPKSKKVQHSNAKNAVLFEAISLIIHH----DSEPNLL 319 (584)
T ss_dssp ESHHHHHHHHHHGGGSSSCS-SHHHHHHHHHHHHHHHHHHHSCCSCSSHHHHHHHHHHHHHHHHHHHHH----CCCHHHH
T ss_pred ccHHHHHHHHHHHHHhCCcc-cHHHHHHHHHHHHHHHHHhhhccccccHHhhhhHHHHHHHHHHHHHhc----CCCHHHH
Confidence 45677778888887654432 222333344444443332 12111111 12333455554442 11100 0
Q ss_pred hhhhhhhccccCCCChHHHHHHHHHHhhccccccCChHH---HHHHHHHHhccCC--ccchh-hHHHHhhhccchhccCC
Q 001875 872 DQVVKLIKPFRDFNTIWQVRVEASRALLDLEFHCNGIDS---ALSLFIKSVEEEP--SLRGQ-VKLGIHAMRICQIKGGS 945 (1001)
Q Consensus 872 ~~~~~~~~~~~~~~~~~~vr~~a~~~l~~~~~~~~~~~~---~l~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~ 945 (1001)
..+...+..+.. ....++|..|+++|..+......... -...++..+..++ ++|.+ ++++.... .
T Consensus 320 ~~~i~~l~~lL~-s~~~niry~aL~~L~~L~~~~~~~~~~~~~~~~il~~l~~~~~~~Ir~~aL~lL~~L~--------n 390 (584)
T d2vgla_ 320 VRACNQLGQFLQ-HRETNLRYLALESMCTLASSEFSHEAVKTHIETVINALKTERDVSVRQRAVDLLYAMC--------D 390 (584)
T ss_dssp HHHHHHHHHHSS-CSCHHHHHHHHHHHHHHTTCTTTHHHHHTTHHHHHHHHTTCCCHHHHHHHHHHHHHHC--------C
T ss_pred HHHHHHHHHHhc-CCCcchHHHHHHHHHHHHccCCCHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhC--------C
Confidence 011111112222 23468999999999887543221111 1334555565554 44442 23332211 1
Q ss_pred CCCCCcCcHHHHHHHHHHhccccccchhhhhhHHHHHHHHhCCCcccccccccc
Q 001875 946 DSNHEVDTVTLVALLNLLESRIAFNNVFLRHHLFGILQILAGRWVYCFLSFVDW 999 (1001)
Q Consensus 946 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~l~g~~~~~~~~~~~~ 999 (1001)
+ =+...++.. |++....-|..+|..++.-.-.++-+-|+-+..++||
T Consensus 391 ~----~Ni~~Iv~e---L~~yl~~~d~~~k~~~i~~I~~la~k~~~~~~~~i~~ 437 (584)
T d2vgla_ 391 R----SNAQQIVAE---MLSYLETADYSIREEIVLKVAILAEKYAVDYTWYVDT 437 (584)
T ss_dssp H----HHHHHHHHH---HHHHHHHCCHHHHHHHHHHHHHHHHHHCSSTHHHHHH
T ss_pred H----HHHHHHHHH---HHHHHhhCCHHHHHHHHHHHHHHHHHCcchHHHHHHH
Confidence 0 012233333 3322233466777777777666666544433334433
No 9
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.49 E-value=0.32 Score=54.63 Aligned_cols=58 Identities=22% Similarity=0.249 Sum_probs=39.7
Q ss_pred HHHHcccCChHHHHHHHHHHHcCC----CC--chhHHhHHHhhhccCcchhHHHHHHHHHHHhhcc
Q 001875 661 INQLEKDGDVVAQAQAIAALEALP----HL--SFNVVNTLNNFLSDSKAFWRVRIEAAYALANTAS 720 (1001)
Q Consensus 661 ~~QL~~drdv~aq~eAi~~l~~~~----~~--s~~~~~~L~~~l~d~~~f~~VR~~Aa~aL~~~~~ 720 (1001)
..+|-.|.+-..|..|+..|.... .. ...+...+...+.|+ -|+||..|+.+|++...
T Consensus 208 l~~l~~d~~~~vr~~a~~~l~~i~~~~~~~~~~~~i~~~l~~~~~D~--~~~Vr~~~~~~l~~l~~ 271 (588)
T d1b3ua_ 208 FSNLASDEQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDK--SWRVRYMVADKFTELQK 271 (588)
T ss_dssp HHHHHTCSCHHHHTTHHHHHHHHHHHSCHHHHHHHTHHHHHHHHTCS--SHHHHHHHHHTHHHHHH
T ss_pred HHHHhcCCchhhHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcccc--cHHHHHHHHHhHHHHHH
Confidence 556778888888888887776431 10 011334566677675 79999999999998764
No 10
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=83.40 E-value=1.3 Score=37.56 Aligned_cols=56 Identities=21% Similarity=0.141 Sum_probs=45.8
Q ss_pred HHcccCChHHHHHHHHHHHcCCCCchhHHhHHHhhhccCcchhHHHHHHHHHHHhhcccc
Q 001875 663 QLEKDGDVVAQAQAIAALEALPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTASEE 722 (1001)
Q Consensus 663 QL~~drdv~aq~eAi~~l~~~~~~s~~~~~~L~~~l~d~~~f~~VR~~Aa~aL~~~~~~~ 722 (1001)
++-.|.|..-|..|+.+|..... ..+...|.+.|.|+ -..||.+|+.+|+++..++
T Consensus 29 ~~l~d~~~~vR~~a~~~L~~~~~--~~~~~~L~~~l~d~--~~~VR~~a~~aL~~i~~~~ 84 (111)
T d1te4a_ 29 ESLSNEDWRIRGAAAWIIGNFQD--ERAVEPLIKLLEDD--SGFVRSGAARSLEQIGGER 84 (111)
T ss_dssp HGGGCSCHHHHHHHHHHHGGGCS--HHHHHHHHHHHHHC--CTHHHHHHHHHHHHHCSHH
T ss_pred HHHcCCCHHHHHHHHHHHHhcch--hhhHHHHHhhhccc--hhHHHHHHHHHHHHhCccc
Confidence 34468999999999999998653 35678899999987 5689999999999987643
No 11
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.41 E-value=7.8 Score=42.99 Aligned_cols=100 Identities=16% Similarity=0.167 Sum_probs=66.0
Q ss_pred HHhHHHhhhccCcchhHHHHHHHHHHHhhcccccccccHHHHHHHHHhcCCCCCCCCCCCCCCCChHHHHHHHHHHHHHh
Q 001875 690 VVNTLNNFLSDSKAFWRVRIEAAYALANTASEETDWAGLLHLVKFYKSRRFDENIGLPRPNDFRDFSEYFVLEAIPHAVA 769 (1001)
Q Consensus 690 ~~~~L~~~l~d~~~f~~VR~~Aa~aL~~~~~~~~~~~g~~~L~~~f~~~~~~~~~~~p~~NdF~d~~~y~v~~ai~~a~a 769 (1001)
+++.|.+-+.|+.. -||..|.++|+....++. ...|+...++..-+++ . +|+|+-..+++
T Consensus 84 ~intl~kDl~d~n~--~iR~lALr~L~~i~~~~i----~~~l~~~l~~~L~D~~-------------p-~VRk~Aa~~l~ 143 (579)
T d2vglb_ 84 AVNSFVKDCEDPNP--LIRALAVRTMGCIRVDKI----TEYLCEPLRKCLKDED-------------P-YVRKTAAVCVA 143 (579)
T ss_dssp THHHHGGGSSSSSH--HHHHHHHHHHHTCCSGGG----HHHHHHHHHHHSSCSC-------------H-HHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCH--HHHHHHHHHHHcCCCHHH----HHHHHHHHHHHHhcCc-------------H-HHHHHHHHHHH
Confidence 56778888888754 499999999999887653 4566665555332221 1 37777667777
Q ss_pred hccccCCCCh--HHHHHHHHHHhhhcCCCCCCCchHHHHHHHHHHhhccc
Q 001875 770 MVRAADNKSP--REAVEFVLQLLKYNDNNGNPYSDVFWLAALVQSVGELE 817 (1001)
Q Consensus 770 ~~r~~~g~~p--~~v~~fll~ll~~NdNs~N~ysD~~y~a~li~al~~~~ 817 (1001)
++=..++..- .....-|.++|. -+|...+++.+.+|+.+.
T Consensus 144 kl~~~~p~~~~~~~~~~~L~~lL~--------D~n~~V~~~Al~~L~~I~ 185 (579)
T d2vglb_ 144 KLHDINAQMVEDQGFLDSLRDLIA--------DSNPMVVANAVAALSEIS 185 (579)
T ss_dssp HHHHSSCCCHHHHHHHHHHHHTTS--------CSCHHHHHHHHHHHHHHT
T ss_pred HHhccChhhhhhhhHHHHHHHHHc--------CCChHHHHHHHHHHHHHH
Confidence 7755554432 334556667664 124568899999998764
No 12
>d1u4ga_ d.92.1.2 (A:) Elastase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=75.88 E-value=6.7 Score=39.71 Aligned_cols=105 Identities=9% Similarity=0.058 Sum_probs=61.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCCCCCccEEEeC--CCCcccccccccchhhcc--ccccccccccchhhhhHHHHHH
Q 001875 276 SKIHNTVEFFHNAFSHYETYLDAKFPFGSYKQVFLA--PEMAVSSSTFGAAMGIFS--SQILYDEKVIDQAIDTSIKLSF 351 (1001)
Q Consensus 276 ~~~~~~~~~~~~~l~f~e~~~g~~YPf~k~~~V~Vp--~~~~~~~~~~gagL~i~~--~~lL~~~~~~d~~~~~~~~iaH 351 (1001)
..+..+.-.+..+.+||.++||. =|+..=-...|- ....++ +.-| ..++|. ....++. ....+++|
T Consensus 71 s~~~dA~y~~~~~~d~y~~~~gr-~~ld~~~~~~vh~g~~~~NA-fW~g-~~m~fGdG~~~~~~~-------~slDVvaH 140 (298)
T d1u4ga_ 71 SPLNDAHFFGGVVFKLYRDWFGT-SPLTHKLYMKVHYGRSVENA-YWDG-TAMLFGDGATMFYPL-------VSLDVAAH 140 (298)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSS-CSSSSCEEEEESCTTTCCCE-EECS-SCEEECCCCSSBSCS-------CCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHhCC-CCcCCCceEEEecCCccccc-eecc-ceeeeecCCCccccc-------cccceeee
Confidence 45667788899999999999994 487642222332 111111 1111 122232 2222221 12347999
Q ss_pred HHHHhhhcccccCCCCChh-HHHHHHHHHHHHHHHHHHhC
Q 001875 352 ALARQWFGVYITPELPNDE-WLLDGLAGFLTDSFIKKFLG 390 (1001)
Q Consensus 352 ELAHQWFG~lVt~~~w~d~-WLnEGfA~Yl~~~~~~~~~G 390 (1001)
|++|--.-.........+. =|||||+.++...+.....+
T Consensus 141 E~tHGvt~~~agl~y~~qSGaLnE~~SDifg~~~e~~~~~ 180 (298)
T d1u4ga_ 141 EVSHGFTEQNSGLIYRGQSGGMNEAFSDMAGEAAEFYMRG 180 (298)
T ss_dssp HHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred eccceeeecccCccccCCccchhHHHHHHHHHHHHHhhcC
Confidence 9999987666555444444 39999999998765433333
No 13
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]}
Probab=73.97 E-value=35 Score=32.21 Aligned_cols=109 Identities=19% Similarity=0.202 Sum_probs=62.2
Q ss_pred HHHHHcccCChHHHHHHHHHHHcC--C-CCchhHHhHHHhhhccCcchhHHHHHHHHHHHhhcccccccccHHHHHHHHH
Q 001875 660 WINQLEKDGDVVAQAQAIAALEAL--P-HLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTASEETDWAGLLHLVKFYK 736 (1001)
Q Consensus 660 ~~~QL~~drdv~aq~eAi~~l~~~--~-~~s~~~~~~L~~~l~d~~~f~~VR~~Aa~aL~~~~~~~~~~~g~~~L~~~f~ 736 (1001)
.+.++-+|+|...|..|+.+|... + .....+...|...+.++ .-+.||..|+.+|+++....... ...++..+.
T Consensus 54 ~l~~~l~d~~~~vr~~a~~aL~~l~~~~~~~~~~~~~l~~~~l~d-~~~~vr~~a~~aL~~~~~~~~~~--~~~~~~~l~ 130 (276)
T d1oyza_ 54 LAIEFCSDKNYIRRDIGAFILGQIKICKKCEDNVFNILNNMALND-KSACVRATAIESTAQRCKKNPIY--SPKIVEQSQ 130 (276)
T ss_dssp HHHHHHTCSSHHHHHHHHHHHHHSCCCTTTHHHHHHHHHHHHHHC-SCHHHHHHHHHHHHHHHHHCGGG--HHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHhccccccccchHHHHHHHHhcC-CChhHHHHHHHHHHHHccccchh--hHHHHHHHH
Confidence 344555789999999999999643 2 22223445554444332 36889999999999887654321 223333333
Q ss_pred hcCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhhccccCCCChHHHHHHHHHHhh
Q 001875 737 SRRFDENIGLPRPNDFRDFSEYFVLEAIPHAVAMVRAADNKSPREAVEFVLQLLK 791 (1001)
Q Consensus 737 ~~~~~~~~~~p~~NdF~d~~~y~v~~ai~~a~a~~r~~~g~~p~~v~~fll~ll~ 791 (1001)
...-++ ...++.+...+++.+.+. .+...++.++.
T Consensus 131 ~~~~d~--------------~~~vr~~a~~~l~~~~~~------~~~~~l~~l~~ 165 (276)
T d1oyza_ 131 ITAFDK--------------STNVRRATAFAISVINDK------ATIPLLINLLK 165 (276)
T ss_dssp HHTTCS--------------CHHHHHHHHHHHHTC---------CCHHHHHHHHT
T ss_pred HHhcCc--------------chHHHHHHHHHHhhcchH------HHHHHHHHhcc
Confidence 322111 124677777777766532 33455666654
No 14
>d1kjpa_ d.92.1.2 (A:) Thermolysin {Bacillus thermoproteolyticus [TaxId: 1427]}
Probab=64.02 E-value=19 Score=36.56 Aligned_cols=105 Identities=4% Similarity=-0.027 Sum_probs=58.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCCCCCc--cEE---EeCCCCcccccccccchhhcc--ccccccccccchhhhhHHH
Q 001875 276 SKIHNTVEFFHNAFSHYETYLDAKFPFGSY--KQV---FLAPEMAVSSSTFGAAMGIFS--SQILYDEKVIDQAIDTSIK 348 (1001)
Q Consensus 276 ~~~~~~~~~~~~~l~f~e~~~g~~YPf~k~--~~V---~Vp~~~~~~~~~~gagL~i~~--~~lL~~~~~~d~~~~~~~~ 348 (1001)
..+..+...+..+.+||.+.|| .-++.-- .++ -+...+.++. ..|. ..+|. ....+.+. .....+
T Consensus 68 ~a~vdA~~~~~~~~d~y~~~~g-r~s~d~~g~~~~~~vh~g~~~~NA~-w~g~-~~~~gdgd~~~~~~~-----~~~~DV 139 (316)
T d1kjpa_ 68 APAVDAHYYAGVTYDYYKNVHN-RLSYDGNNAAIRSSVHYSQGYNNAF-WNGS-QMVYGDGDGQTFIPL-----SGGIDV 139 (316)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC-CCTTTSSCCCEEEEEEESSSCCCEE-ECSS-SEEEECCCSSSBSCG-----GGCHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHhC-CCCcCCCCCeEEEEEEeCCCccCce-EcCc-ccEeecccccccCCc-----cccchh
Confidence 3455777788899999999998 5566322 332 2332222221 1121 22222 11112111 122458
Q ss_pred HHHHHHHhhhcccccCCCCChhH-HHHHHHHHHHHHHHHHH
Q 001875 349 LSFALARQWFGVYITPELPNDEW-LLDGLAGFLTDSFIKKF 388 (1001)
Q Consensus 349 iaHELAHQWFG~lVt~~~w~d~W-LnEGfA~Yl~~~~~~~~ 388 (1001)
++||++|--.-.......-.+.. |+|||+.++...+....
T Consensus 140 v~HE~tHGvt~~tagl~y~~qsGaLnEg~SDifg~~v~~~~ 180 (316)
T d1kjpa_ 140 VAHELTHAVTDYTAGLIYQNESGAINEAISDIFGTLVEFYA 180 (316)
T ss_dssp HHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhheecccCccccCCccchhhHHHHHHHHHHHhhh
Confidence 99999998665544433333333 99999999987764443
No 15
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=61.07 E-value=23 Score=36.25 Aligned_cols=233 Identities=13% Similarity=0.147 Sum_probs=117.8
Q ss_pred HHHHHHcccCChHHHHHHHHHHHcCCCCchh---------HHhHHHhhhccCcchhHHHHHHHHHHHhhccccc------
Q 001875 659 MWINQLEKDGDVVAQAQAIAALEALPHLSFN---------VVNTLNNFLSDSKAFWRVRIEAAYALANTASEET------ 723 (1001)
Q Consensus 659 m~~~QL~~drdv~aq~eAi~~l~~~~~~s~~---------~~~~L~~~l~d~~~f~~VR~~Aa~aL~~~~~~~~------ 723 (1001)
..+..|++..+...|.+|+..|......+.. ++..|...|.+ ..-.+|..|+.+|++++....
T Consensus 60 ~Lv~lL~~~~~~~v~~~a~~~L~~la~~~~~~~~~i~~~~~i~~l~~~L~~--~~~~~~~~a~~~L~nl~~~~~~~~~~i 137 (434)
T d1q1sc_ 60 KFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLAS--PHAHISEQAVWALGNIAGDGSAFRDLV 137 (434)
T ss_dssp HHHHHTTCGGGHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTC--SCHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHccCCCHHHHHHHHHHHHHHhcCChhhhhHhhhccchhhhhhcccc--CCHHHHHHHHHHHHHHhccchHHHHHH
Confidence 4555666666777888888888754322211 34457777765 368899999999999875421
Q ss_pred -ccccHHHHHHHHHhcCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhhccccCC-CC----hHHHHHHHHHHhhhcCCCC
Q 001875 724 -DWAGLLHLVKFYKSRRFDENIGLPRPNDFRDFSEYFVLEAIPHAVAMVRAADN-KS----PREAVEFVLQLLKYNDNNG 797 (1001)
Q Consensus 724 -~~~g~~~L~~~f~~~~~~~~~~~p~~NdF~d~~~y~v~~ai~~a~a~~r~~~g-~~----p~~v~~fll~ll~~NdNs~ 797 (1001)
.-.|+..|++.+... ..+... .- ..+.+-.+++.+-.... .. ...+...|..+++.+
T Consensus 138 ~~~~~~~~l~~~l~~~---------~~~~~~---~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~l~~ll~~~---- 200 (434)
T d1q1sc_ 138 IKHGAIDPLLALLAVP---------DLSTLA---CG-YLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHN---- 200 (434)
T ss_dssp HHTTCHHHHHHHTCSS---------CGGGSC---HH-HHHHHHHHHHHHTCCCTTCCCHHHHHHHHHHHHHHTTCS----
T ss_pred HHhhhhhHHHHHHHhc---------ccccch---HH-HHHHHHHHHHHHhhcccccchhhhhhhHHHHHHHHHhcc----
Confidence 123456666555421 011111 11 12333344554432222 11 233556667776643
Q ss_pred CCCchHHHHHHHHHHhhccccccccH-HHH--HHHHHHHHHHHhcccccCCCCchhHHHHHHHHHHHHH---------Hh
Q 001875 798 NPYSDVFWLAALVQSVGELEFGQQSI-LFL--SSLLKRIDRLLQFDRLMPSYNGILTISCIRTLTQIAL---------KL 865 (1001)
Q Consensus 798 N~ysD~~y~a~li~al~~~~~~~~~~-~~~--~~~~~ei~r~~~~d~~~psy~~~vt~~~l~~~~~l~~---------~~ 865 (1001)
|.-.+...+.+|+.+....... ..+ ..++.-+..+++- -+.-+...|+.++..++. ..
T Consensus 201 ----~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~Lv~ll~~------~~~~~~~~al~~l~~l~~~~~~~~~~~~~ 270 (434)
T d1q1sc_ 201 ----DPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGA------TELPIVTPALRAIGNIVTGTDEQTQKVID 270 (434)
T ss_dssp ----CHHHHHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHHHHTC------SCHHHHHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred ----ccchhhhHHhhhcccchhhhhhHHHHhhcccchhccccccc------chhhhhhchhhhhhhHHhhhhHHHHHHHh
Confidence 3446777778887764332111 111 1234444444432 234455566666665531 01
Q ss_pred cCCCChhhhhhhhccccCCCChHHHHHHHHHHhhccccccCChH------HHHHHHHHHhcc-CCccch
Q 001875 866 SGFISLDQVVKLIKPFRDFNTIWQVRVEASRALLDLEFHCNGID------SALSLFIKSVEE-EPSLRG 927 (1001)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~~~~~~~vr~~a~~~l~~~~~~~~~~~------~~l~~~~~~~~~-~~~~~~ 927 (1001)
.|.++ .+..++ . .....||..|..+|-.+........ .++..++..+.+ ++.++.
T Consensus 271 ~~~~~--~l~~ll----~-~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~~~i~~li~~l~~~~~~v~~ 332 (434)
T d1q1sc_ 271 AGALA--VFPSLL----T-NPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQK 332 (434)
T ss_dssp TTGGG--GHHHHT----T-CSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHSSCHHHHH
T ss_pred ccccc--hHHHhh----c-ccchhhhHHHHHHHhhhccccchhHHHHhhhhhHHHHHHHHhccChHHHH
Confidence 11111 122222 1 2235799999999988754322111 135566666654 344433
No 16
>d1bqba_ d.92.1.2 (A:) Aureolysin {Staphylococcus aureus [TaxId: 1280]}
Probab=60.48 E-value=17 Score=36.59 Aligned_cols=101 Identities=5% Similarity=0.015 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCc--cEEE-eC-CC----Ccccccccccchhhcc--ccccccccccchhhhhHH
Q 001875 278 IHNTVEFFHNAFSHYETYLDAKFPFGSY--KQVF-LA-PE----MAVSSSTFGAAMGIFS--SQILYDEKVIDQAIDTSI 347 (1001)
Q Consensus 278 ~~~~~~~~~~~l~f~e~~~g~~YPf~k~--~~V~-Vp-~~----~~~~~~~~gagL~i~~--~~lL~~~~~~d~~~~~~~ 347 (1001)
+-.+...+....+||.+.|| ...+..- .++. |- .. .......|...+.+|. +.-.+.+.. ....
T Consensus 67 ~vda~y~~~~~~d~~~~~~g-r~~~d~~g~~~~~~v~~~~~~~~~~~~na~w~g~~~~fGdG~~~~~~~~~-----~~~D 140 (301)
T d1bqba_ 67 GVDANYYAKQTYDYYKNTFG-RESYDNHGSPIVSLTHVNHYGGQDNRNNAAWIGDKMIYGDGDGRTFTNLS-----GAND 140 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHC-CCSTTSSCCCEEEEECCCEETTEECTTCEEECSSSEEECCCCSSSBSCGG-----GCHH
T ss_pred HHHHHHHHHHHHHHHHHHhC-CCCcCCCCcceeeeeeecccCCCCcccCCccCCceEEEECCCCcccCCch-----hhhh
Confidence 34566778888999999998 6777431 2221 11 00 0000011111233332 212222211 1235
Q ss_pred HHHHHHHHhhhcccccCCCCChhH-HHHHHHHHHHHHH
Q 001875 348 KLSFALARQWFGVYITPELPNDEW-LLDGLAGFLTDSF 384 (1001)
Q Consensus 348 ~iaHELAHQWFG~lVt~~~w~d~W-LnEGfA~Yl~~~~ 384 (1001)
+++||++|--....+....-.+.. |+|||+.++...+
T Consensus 141 Vv~HE~~HGvt~~~~~l~y~~esGalnEg~sDi~g~~~ 178 (301)
T d1bqba_ 141 VVAHEITHGVTQQTANLEYKDQSGALNESFSDVFGYFV 178 (301)
T ss_dssp HHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhhheeccccCcccccCccchhhHHHHHHHHHh
Confidence 899999999876544433333333 9999999998654
No 17
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=56.59 E-value=42 Score=34.14 Aligned_cols=210 Identities=20% Similarity=0.235 Sum_probs=109.6
Q ss_pred hhHHHHHHcccCChHHHHHHHHHHHcC----CCCch-h-----HHhHHHhhhccCcchhHHHHHHHHHHHhhccccc---
Q 001875 657 VQMWINQLEKDGDVVAQAQAIAALEAL----PHLSF-N-----VVNTLNNFLSDSKAFWRVRIEAAYALANTASEET--- 723 (1001)
Q Consensus 657 ~~m~~~QL~~drdv~aq~eAi~~l~~~----~~~s~-~-----~~~~L~~~l~d~~~f~~VR~~Aa~aL~~~~~~~~--- 723 (1001)
-...+.+|+. .|...|.+|+.+|++. ..... . +...|.+.|.+. ....||.+||.+|+.++....
T Consensus 15 i~~lv~~l~s-~~~~~~~~a~~~l~~l~s~~~~~~~~~i~~~g~i~~Lv~lL~~~-~~~~v~~~a~~~L~~la~~~~~~~ 92 (434)
T d1q1sc_ 15 VEDIVKGINS-NNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKT-DCSPIQFESAWALTNIASGTSEQT 92 (434)
T ss_dssp HHHHHHHHTS-SCHHHHHHHHHHHHHHHHSSSCCCHHHHHHTTCHHHHHHHTTCG-GGHHHHHHHHHHHHHHHTSCHHHH
T ss_pred HHHHHHHHcC-CCHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHHccC-CCHHHHHHHHHHHHHHhcCChhhh
Confidence 4566788865 5999999999888742 11111 1 234577777543 467899999999999875322
Q ss_pred ----ccccHHHHHHHHHhcCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhhccccCCCChH-----HHHHHHHHHhhhcC
Q 001875 724 ----DWAGLLHLVKFYKSRRFDENIGLPRPNDFRDFSEYFVLEAIPHAVAMVRAADNKSPR-----EAVEFVLQLLKYND 794 (1001)
Q Consensus 724 ----~~~g~~~L~~~f~~~~~~~~~~~p~~NdF~d~~~y~v~~ai~~a~a~~r~~~g~~p~-----~v~~fll~ll~~Nd 794 (1001)
.-.|++.|+++.++. + -.+++....|++.+=..+..+.. .+...|+.+|...+
T Consensus 93 ~~i~~~~~i~~l~~~L~~~-----------~-------~~~~~~a~~~L~nl~~~~~~~~~~i~~~~~~~~l~~~l~~~~ 154 (434)
T d1q1sc_ 93 KAVVDGGAIPAFISLLASP-----------H-------AHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPD 154 (434)
T ss_dssp HHHHHTTHHHHHHHHTTCS-----------C-------HHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTCSSC
T ss_pred hHhhhccchhhhhhccccC-----------C-------HHHHHHHHHHHHHHhccchHHHHHHHHhhhhhHHHHHHHhcc
Confidence 223567777665431 0 13566666777766432211111 23456777776444
Q ss_pred CCCCCCchHHHHHHHHHHhhccccc---cccHHHHHHHHHHHHHHHhcccccCCCCchhHHHHHHHHHHHHH--------
Q 001875 795 NNGNPYSDVFWLAALVQSVGELEFG---QQSILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRTLTQIAL-------- 863 (1001)
Q Consensus 795 Ns~N~ysD~~y~a~li~al~~~~~~---~~~~~~~~~~~~ei~r~~~~d~~~psy~~~vt~~~l~~~~~l~~-------- 863 (1001)
++. ...-.+..+..++.+.... .........++.-+..+++. ...-+...|+.++..++.
T Consensus 155 ~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~l~~ll~~------~~~~~~~~a~~~l~~l~~~~~~~~~~ 225 (434)
T d1q1sc_ 155 LST---LACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHH------NDPEVLADSCWAISYLTDGPNERIEM 225 (434)
T ss_dssp GGG---SCHHHHHHHHHHHHHHTCCCTTCCCHHHHHHHHHHHHHHTTC------SCHHHHHHHHHHHHHHTSSCHHHHHH
T ss_pred ccc---chHHHHHHHHHHHHHHhhcccccchhhhhhhHHHHHHHHHhc------cccchhhhHHhhhcccchhhhhhHHH
Confidence 332 2223344444455443221 11222334455555555432 223334445555555421
Q ss_pred -HhcCCCChhhhhhhhccccCCCChHHHHHHHHHHhhccc
Q 001875 864 -KLSGFISLDQVVKLIKPFRDFNTIWQVRVEASRALLDLE 902 (1001)
Q Consensus 864 -~~~~~~~~~~~~~~~~~~~~~~~~~~vr~~a~~~l~~~~ 902 (1001)
...|.+| .+..++ .. .-..++..|+.+|-.+.
T Consensus 226 ~~~~~~~~--~Lv~ll----~~-~~~~~~~~al~~l~~l~ 258 (434)
T d1q1sc_ 226 VVKKGVVP--QLVKLL----GA-TELPIVTPALRAIGNIV 258 (434)
T ss_dssp HHTTTCHH--HHHHHH----TC-SCHHHHHHHHHHHHHHT
T ss_pred Hhhcccch--hccccc----cc-chhhhhhchhhhhhhHH
Confidence 0112221 122222 11 23578888888887654
No 18
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment {Mouse (Mus musculus) [TaxId: 10090]}
Probab=54.56 E-value=32 Score=37.66 Aligned_cols=244 Identities=11% Similarity=0.044 Sum_probs=115.8
Q ss_pred ccCChHHHHHHHHHHHcC----CCC--chhHHhHHHhhhccCcchhHHHHHHHHHHHhhccccc-cccc-HHHHHHHHHh
Q 001875 666 KDGDVVAQAQAIAALEAL----PHL--SFNVVNTLNNFLSDSKAFWRVRIEAAYALANTASEET-DWAG-LLHLVKFYKS 737 (1001)
Q Consensus 666 ~drdv~aq~eAi~~l~~~----~~~--s~~~~~~L~~~l~d~~~f~~VR~~Aa~aL~~~~~~~~-~~~g-~~~L~~~f~~ 737 (1001)
.|.+..-|-.|+.++.+. |.. .......|.+.|.|+ -.+|+..|+.+|..+..... .+.. .+.++..+..
T Consensus 150 ~d~~p~VRk~A~l~l~ki~~~~pd~~~~~~~~~~L~~lL~D~--d~~V~~aAl~ll~eI~~~~p~~~~~~~~~~i~~L~~ 227 (584)
T d2vgla_ 150 GDTMDSVKQSAALCLLRLYRTSPDLVPMGDWTSRVVHLLNDQ--HLGVVTAATSLITTLAQKNPEEFKTSVSLAVSRLSR 227 (584)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHCGGGCCCCSCHHHHHHHTTCS--CHHHHHHHHHHHHHHHHHCHHHHTTHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHhChhhhhhhhHHHHHHHHhcCC--ChhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 467777888887776543 221 111345677888875 46899999999988765432 1222 1222222222
Q ss_pred cCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhhccccCCCChHHHHHH----HHHHhhhcCCCCCCCchHH------HHH
Q 001875 738 RRFDENIGLPRPNDFRDFSEYFVLEAIPHAVAMVRAADNKSPREAVEF----VLQLLKYNDNNGNPYSDVF------WLA 807 (1001)
Q Consensus 738 ~~~~~~~~~p~~NdF~d~~~y~v~~ai~~a~a~~r~~~g~~p~~v~~f----ll~ll~~NdNs~N~ysD~~------y~a 807 (1001)
.. ......++..++......++|..+...++..-..+ .+++... +-+++.--+.....-.... -+-
T Consensus 228 ll-~~~~~~~~~~~~~~~~~~~lq~~il~ll~~l~~~~---~~~~~~~l~~~l~~Il~~~~~~~~~~~~~~~~~~~aVl~ 303 (584)
T d2vgla_ 228 IV-TSASTDLQDYTYYFVPAPWLSVKLLRLLQCYPPPE---DPAVRGRLTECLETILNKAQEPPKSKKVQHSNAKNAVLF 303 (584)
T ss_dssp HH-HCCSSSCSTTEETTEESHHHHHHHHHHGGGSSSCS---SHHHHHHHHHHHHHHHHHHHSCCSCSSHHHHHHHHHHHH
T ss_pred HH-hhcccchHHHHHhhcccHHHHHHHHHHHHHhCCcc---cHHHHHHHHHHHHHHHHHhhhccccccHHhhhhHHHHHH
Confidence 10 00112223334444556677877777776553222 2222222 2222221111111111111 111
Q ss_pred HHHHHhhccccccccHHHHHHHHHHHHHHHhcccccCCCCchhHHHHHHHHHHHHHHhcCCCCh--hhhhhhhccccCCC
Q 001875 808 ALVQSVGELEFGQQSILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRTLTQIALKLSGFISL--DQVVKLIKPFRDFN 885 (1001)
Q Consensus 808 ~li~al~~~~~~~~~~~~~~~~~~ei~r~~~~d~~~psy~~~vt~~~l~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~ 885 (1001)
..+.++..... .......++.-+.+++ -|-..-+-..+|+.+.+++. ....|. ......+..+...+
T Consensus 304 e~i~~i~~~~~---~~~~~~~~i~~l~~lL------~s~~~niry~aL~~L~~L~~--~~~~~~~~~~~~~~il~~l~~~ 372 (584)
T d2vgla_ 304 EAISLIIHHDS---EPNLLVRACNQLGQFL------QHRETNLRYLALESMCTLAS--SEFSHEAVKTHIETVINALKTE 372 (584)
T ss_dssp HHHHHHHHHCC---CHHHHHHHHHHHHHHS------SCSCHHHHHHHHHHHHHHTT--CTTTHHHHHTTHHHHHHHHTTC
T ss_pred HHHHHHHhcCC---CHHHHHHHHHHHHHHh------cCCCcchHHHHHHHHHHHHc--cCCCHHHHHHHHHHHHHhcccC
Confidence 22222222211 1223344554444443 23334455567888877642 111111 00001111112234
Q ss_pred ChHHHHHHHHHHhhccccccCChHHHHHHHHHHhcc-CCccch
Q 001875 886 TIWQVRVEASRALLDLEFHCNGIDSALSLFIKSVEE-EPSLRG 927 (1001)
Q Consensus 886 ~~~~vr~~a~~~l~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~ 927 (1001)
....||..|++.|..+.- .+..+.++.-+++++.+ |+.++.
T Consensus 373 ~~~~Ir~~aL~lL~~L~n-~~Ni~~Iv~eL~~yl~~~d~~~k~ 414 (584)
T d2vgla_ 373 RDVSVRQRAVDLLYAMCD-RSNAQQIVAEMLSYLETADYSIRE 414 (584)
T ss_dssp CCHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHCCHHHHH
T ss_pred chhHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHhhCCHHHHH
Confidence 456799999999988753 23334677777777764 565554
No 19
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.07 E-value=1.3e+02 Score=34.98 Aligned_cols=31 Identities=26% Similarity=0.203 Sum_probs=23.9
Q ss_pred hHHhHHHhhhccCcchhHHHHHHHHHHHhhccc
Q 001875 689 NVVNTLNNFLSDSKAFWRVRIEAAYALANTASE 721 (1001)
Q Consensus 689 ~~~~~L~~~l~d~~~f~~VR~~Aa~aL~~~~~~ 721 (1001)
.++..|.+.|.|. --.||..|+++|+.....
T Consensus 45 ~i~~~ll~~L~D~--~~~Vq~~A~k~l~~l~~~ 75 (1207)
T d1u6gc_ 45 KVVKMILKLLEDK--NGEVQNLAVKCLGPLVSK 75 (1207)
T ss_dssp HHHHHHHHHTTCS--SHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCC--CHHHHHHHHHHHHHHHHh
Confidence 3567788888875 467999999999887654
No 20
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.30 E-value=2.5e+02 Score=32.23 Aligned_cols=134 Identities=11% Similarity=0.132 Sum_probs=70.3
Q ss_pred chhHHHHHHHHHHHHHHhcCCC-C-hhhhhhhhccccCCCChHHHHHHHHHHhhccccccCC--hHHHHHHHHHHhccCC
Q 001875 848 GILTISCIRTLTQIALKLSGFI-S-LDQVVKLIKPFRDFNTIWQVRVEASRALLDLEFHCNG--IDSALSLFIKSVEEEP 923 (1001)
Q Consensus 848 ~~vt~~~l~~~~~l~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~vr~~a~~~l~~~~~~~~~--~~~~l~~~~~~~~~~~ 923 (1001)
--+...|+..+..+.......+ + .+.+...+.+...... ..||.+|..||-.+...... ....+..++..+..+.
T Consensus 145 ~~v~~~al~~l~~l~~~~g~~l~~~~~~il~~l~~~l~~~~-~~vR~~A~~~l~~l~~~~~~~~~~~~~~~ll~~l~~~~ 223 (1207)
T d1u6gc_ 145 VSVQLEALDIMADMLSRQGGLLVNFHPSILTCLLPQLTSPR-LAVRKRTIIALGHLVMSCGNIVFVDLIEHLLSELSKND 223 (1207)
T ss_dssp HHHHHHHHHHHHHHHHHTCSSCTTTHHHHHHHHGGGGGCSS-HHHHHHHHHHHHHHTTTC----CTTHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHccCC
Confidence 3567788888888865443333 2 2233333333333333 56999999999877543322 2345667777766553
Q ss_pred c--cch-hhHHHHhhhccchhccCCCCCCCcCcHHHHHHHHHHhccccccchhhhhhHHHHHHHHhCCCcc
Q 001875 924 S--LRG-QVKLGIHAMRICQIKGGSDSNHEVDTVTLVALLNLLESRIAFNNVFLRHHLFGILQILAGRWVY 991 (1001)
Q Consensus 924 ~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~l~g~~~~ 991 (1001)
. .|. .+..+....+.....-+. . .+.++..+...++ ..|..+|..++..+..+....|.
T Consensus 224 ~~~~~~~~~~~l~~l~~~~~~~~~~----~--l~~i~~~l~~~l~---~~~~~~r~~al~~l~~l~~~~~~ 285 (1207)
T d1u6gc_ 224 SMSTTRTYIQCIAAISRQAGHRIGE----Y--LEKIIPLVVKFCN---VDDDELREYCIQAFESFVRRCPK 285 (1207)
T ss_dssp SSCSCTTHHHHHHHHHHHSSGGGTT----S--CTTHHHHHHHHHS---SCCTTTHHHHHHHHHHHHHCTTC
T ss_pred CHHHHHHHHHHHHHHHHHcchhhHH----H--HHHHHHHHHHHhc---CccHHHHHHHHHHHHHHHHhChh
Confidence 3 332 122222222221111111 1 2345555555554 34667888888777777655443
No 21
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.07 E-value=1.5e+02 Score=30.72 Aligned_cols=130 Identities=18% Similarity=0.101 Sum_probs=71.1
Q ss_pred cccCChHHHHHHHHHHHcC---CC---CchhHHhHHHhhhccCcchhHHHHHHHHHHHhhcccc-------cccccHHHH
Q 001875 665 EKDGDVVAQAQAIAALEAL---PH---LSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTASEE-------TDWAGLLHL 731 (1001)
Q Consensus 665 ~~drdv~aq~eAi~~l~~~---~~---~s~~~~~~L~~~l~d~~~f~~VR~~Aa~aL~~~~~~~-------~~~~g~~~L 731 (1001)
-.+++...+..|+.+|... .. ........|.+.+.++ --.+|..|+.+|+..+... ....|+..|
T Consensus 236 l~~~~~~~~~~a~~~l~~ls~~~~~~~~~~~~i~~Lv~ll~~~--~~~~~~~a~~~L~~l~~~~~~~~~~i~~~~~i~~L 313 (529)
T d1jdha_ 236 LTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSD--DINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEAL 313 (529)
T ss_dssp TTSSCHHHHHHHHHHHHHHHTTCTTCSCCHHHHHHHHHHTTCS--CHHHHHHHHHHHHHHTTTCHHHHHHHHHTTHHHHH
T ss_pred hcccchhhhhhhhhHHHhccccccchhhhhhcchhhhhhcccc--cHHHHHHHHHHHHhhccchhHHHHHHHHhhhHHHH
Confidence 3456666677777666532 11 1123567788887665 3479999999999876432 134567777
Q ss_pred HHHHHhcCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhhccccCCCChH--------HHHHHHHHHhhhcCCCCCCCchH
Q 001875 732 VKFYKSRRFDENIGLPRPNDFRDFSEYFVLEAIPHAVAMVRAADNKSPR--------EAVEFVLQLLKYNDNNGNPYSDV 803 (1001)
Q Consensus 732 ~~~f~~~~~~~~~~~p~~NdF~d~~~y~v~~ai~~a~a~~r~~~g~~p~--------~v~~fll~ll~~NdNs~N~ysD~ 803 (1001)
++.-.+. ++. --++.+...++..+-........ ...+.|+++|+.- ++.
T Consensus 314 i~~l~~~-----------~~~-----~~~~~~a~~aL~~l~~~~~~~~~~~~~i~~~~~l~~L~~ll~~~-------~~~ 370 (529)
T d1jdha_ 314 VRTVLRA-----------GDR-----EDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPP-------SHW 370 (529)
T ss_dssp HHHHHHH-----------TTC-----HHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTCHHHHHHTTSTT-------CCH
T ss_pred HHHHHhh-----------hcc-----hhHHHHHHHHhhcccchhhcchhhhhhHHhcccchhHHHHHhcc-------chH
Confidence 7766531 000 12455555566555322211111 1134567777632 223
Q ss_pred HHHHHHHHHhhccccc
Q 001875 804 FWLAALVQSVGELEFG 819 (1001)
Q Consensus 804 ~y~a~li~al~~~~~~ 819 (1001)
--+.+.+.+|+++..+
T Consensus 371 ~~~~~~~~~l~~l~~~ 386 (529)
T d1jdha_ 371 PLIKATVGLIRNLALC 386 (529)
T ss_dssp HHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHhhcchh
Confidence 3556666677666544
No 22
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.73 E-value=2.3e+02 Score=29.12 Aligned_cols=211 Identities=13% Similarity=0.122 Sum_probs=108.9
Q ss_pred hHHHHHHcccCChHHHHHHHHHHHcCCCCch--------hHHhHHHhhhccCcchhHHHHHHHHHHHhhccccc------
Q 001875 658 QMWINQLEKDGDVVAQAQAIAALEALPHLSF--------NVVNTLNNFLSDSKAFWRVRIEAAYALANTASEET------ 723 (1001)
Q Consensus 658 ~m~~~QL~~drdv~aq~eAi~~l~~~~~~s~--------~~~~~L~~~l~d~~~f~~VR~~Aa~aL~~~~~~~~------ 723 (1001)
...+..|+...|...|..|+.+|...-.... ..+..|.+.|.++ --.|+..|+.+|+..+....
T Consensus 62 ~~l~~~L~~~~~~~~~~~a~~~L~~l~~~~~~~~~i~~~g~i~~Li~lL~~~--~~~v~~~a~~aL~~l~~~~~~~~~~~ 139 (529)
T d1jdha_ 62 SAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSP--VDSVLFYAITTLHNLLLHQEGAKMAV 139 (529)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHHHHCTTHHHHH
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHhCCchhHHHHHHCCCHHHHHHHhCCC--CHHHHHHHHHHHHHhhcccchhhhHH
Confidence 4556678888888899989888876532211 1245678888764 56899999999998654321
Q ss_pred -ccccHHHHHHHHHhcCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhhccccCCCChH-----HHHHHHHHHhhhcCCCC
Q 001875 724 -DWAGLLHLVKFYKSRRFDENIGLPRPNDFRDFSEYFVLEAIPHAVAMVRAADNKSPR-----EAVEFVLQLLKYNDNNG 797 (1001)
Q Consensus 724 -~~~g~~~L~~~f~~~~~~~~~~~p~~NdF~d~~~y~v~~ai~~a~a~~r~~~g~~p~-----~v~~fll~ll~~NdNs~ 797 (1001)
...|++.|++..++ + | . -++...-.++..+-..+..... .+...|+++|+.+++.
T Consensus 140 ~~~g~i~~Lv~lL~~----~-------~----~---~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~L~~ll~~~~~~- 200 (529)
T d1jdha_ 140 RLAGGLQKMVALLNK----T-------N----V---KFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYE- 200 (529)
T ss_dssp HHHTHHHHHHHGGGC----C-------C----H---HHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCCCH-
T ss_pred HhcCCchHHHHHHHc----c-------C----h---HHHHHHHHHHHHHhhhhhHHHHHHHhcccchHHHHHHHhhhhH-
Confidence 22457777765542 0 0 0 1455555555544221111111 2466788888754322
Q ss_pred CCCchHHHHHHHHHHhhccccccccHH-HHH-HHHHHHHHHHhcccccCCCCchhHHHHHHHHHHHHHHhcCCCChhhhh
Q 001875 798 NPYSDVFWLAALVQSVGELEFGQQSIL-FLS-SLLKRIDRLLQFDRLMPSYNGILTISCIRTLTQIALKLSGFISLDQVV 875 (1001)
Q Consensus 798 N~ysD~~y~a~li~al~~~~~~~~~~~-~~~-~~~~ei~r~~~~d~~~psy~~~vt~~~l~~~~~l~~~~~~~~~~~~~~ 875 (1001)
--+...+.+|.++....+... +.+ ..+.-+.+++ .+...-+-..|+.++..+.-...+..-.....
T Consensus 201 ------~~~~~~~~~l~~ls~~~~~~~~~~~~g~~~~L~~ll------~~~~~~~~~~a~~~l~~ls~~~~~~~~~~~~i 268 (529)
T d1jdha_ 201 ------KLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHL------TDPSQRLVQNCLWTLRNLSDAATKQEGMEGLL 268 (529)
T ss_dssp ------HHHHHHHHHHHHHTTSTTHHHHHHHTTHHHHHHTTT------TSSCHHHHHHHHHHHHHHHTTCTTCSCCHHHH
T ss_pred ------HHHHHHHHHHhhhhccccccchhhhhhhhhhHHHHh------cccchhhhhhhhhHHHhccccccchhhhhhcc
Confidence 234444555555443322221 111 2444444433 23333344556666666642222222212111
Q ss_pred hhhccccCCCChHHHHHHHHHHhhccc
Q 001875 876 KLIKPFRDFNTIWQVRVEASRALLDLE 902 (1001)
Q Consensus 876 ~~~~~~~~~~~~~~vr~~a~~~l~~~~ 902 (1001)
..+......+ -..+|..|..+|-.+.
T Consensus 269 ~~Lv~ll~~~-~~~~~~~a~~~L~~l~ 294 (529)
T d1jdha_ 269 GTLVQLLGSD-DINVVTCAAGILSNLT 294 (529)
T ss_dssp HHHHHHTTCS-CHHHHHHHHHHHHHHT
T ss_pred hhhhhhcccc-cHHHHHHHHHHHHhhc
Confidence 1112222222 2468888888877764
No 23
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.26 E-value=59 Score=30.91 Aligned_cols=180 Identities=12% Similarity=0.111 Sum_probs=0.0
Q ss_pred ccCchhHHHHHHcccCChHHHHHHHHHHHcCCCCchhHHh---------HHHhhhccCcchhHHHHHHHHHHHhhccccc
Q 001875 653 FNQPVQMWINQLEKDGDVVAQAQAIAALEALPHLSFNVVN---------TLNNFLSDSKAFWRVRIEAAYALANTASEET 723 (1001)
Q Consensus 653 ~~qp~~m~~~QL~~drdv~aq~eAi~~l~~~~~~s~~~~~---------~L~~~l~d~~~f~~VR~~Aa~aL~~~~~~~~ 723 (1001)
+.+|.-.+..-.++..|-..+..|+..|...-........ .|...+.++. -.||..||.+|+.++....
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~Al~~L~~L~~~~d~a~~l~~~gg~~~ll~~ll~s~~--~~vr~~A~~~L~~l~~~~~ 91 (264)
T d1xqra1 14 LSQPMPPTAGEAEQAADQQEREGALELLADLCENMDNAADFCQLSGMHLLVGRYLEAGA--AGLRWRAAQLIGTCSQNVA 91 (264)
T ss_dssp HHSCCCSSCCHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHTTTTCSS--HHHHHHHHHHHHHHHTTCH
T ss_pred hhccCcchHHHhhcCCCHHHHHHHHHHHHHHHcCHHHHHHHHHcCCHHHHHHHHhCCCC--HHHHHHHHHHHHHHHHHHH
Q ss_pred -------ccccHHHHHHHHHhcCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhhccccCCCChHHH-----HHHHHHHhh
Q 001875 724 -------DWAGLLHLVKFYKSRRFDENIGLPRPNDFRDFSEYFVLEAIPHAVAMVRAADNKSPREA-----VEFVLQLLK 791 (1001)
Q Consensus 724 -------~~~g~~~L~~~f~~~~~~~~~~~p~~NdF~d~~~y~v~~ai~~a~a~~r~~~g~~p~~v-----~~fll~ll~ 791 (1001)
...|+++|++.+.+ ...|. ++.....|++.+=..+......+ ...|+++|+
T Consensus 92 ~~~~~~~~~~~i~~Lv~lL~~------~~~~~-----------v~~~a~~aL~~l~~~~~~~~~~~~~~~gi~~L~~lL~ 154 (264)
T d1xqra1 92 AIQEQVLGLGALRKLLRLLDR------DACDT-----------VRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQ 154 (264)
T ss_dssp HHHHHHHHTTHHHHHHHHHHH------CSCHH-----------HHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHHHHcCchHHHHHHhhc------CCCHH-----------HHHHHHHHHHHHhccchhhHHHHHHhhhhhHHHHHHh
Q ss_pred hcCCCCCCCchHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHhcccccCCCCchhHHHHHHHHHHHH
Q 001875 792 YNDNNGNPYSDVFWLAALVQSVGELEFGQQSILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRTLTQIA 862 (1001)
Q Consensus 792 ~NdNs~N~ysD~~y~a~li~al~~~~~~~~~~~~~~~~~~ei~r~~~~d~~~psy~~~vt~~~l~~~~~l~ 862 (1001)
.+|..- -.+.+.++..|+..............++.-+-.+++ |.+.-+...|+.+|..|+
T Consensus 155 ~~~~~~-----~~~a~~~L~~l~~~~~~~~~~~~~~~~v~~L~~lL~------~~~~~~~~~a~~aL~~L~ 214 (264)
T d1xqra1 155 QQVQKL-----KVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVALVR------TEHSPFHEHVLGALCSLV 214 (264)
T ss_dssp SSCHHH-----HHHHHHHHHHHHHHCGGGHHHHHHTTHHHHHHHHHT------SCCSTHHHHHHHHHHHHH
T ss_pred cCchHH-----HHHHHHHHHHHHhccHHHHHHHHHhhhHHHHHHHHc------CCCHHHHHHHHHHHHHHH
No 24
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.24 E-value=1.1e+02 Score=30.07 Aligned_cols=73 Identities=19% Similarity=0.075 Sum_probs=50.5
Q ss_pred HHcccCChHHHHHHHHHHHcCC--CC--chh-----HHhHHHhhhccCcchhHHHHHHHHHHHhhccc--c-----cccc
Q 001875 663 QLEKDGDVVAQAQAIAALEALP--HL--SFN-----VVNTLNNFLSDSKAFWRVRIEAAYALANTASE--E-----TDWA 726 (1001)
Q Consensus 663 QL~~drdv~aq~eAi~~l~~~~--~~--s~~-----~~~~L~~~l~d~~~f~~VR~~Aa~aL~~~~~~--~-----~~~~ 726 (1001)
||.++.|..-|..|+.+|...- +. ... .+..|.+.|.++ .-.||..|+.+|.+.+.. + ....
T Consensus 9 ~~L~~~~~~~~~~a~~~l~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~--~~~v~~~a~~aL~~L~~~~~~~~~~i~~~g 86 (457)
T d1xm9a1 9 QYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSP--NQNVQQAAAGALRNLVFRSTTNKLETRRQN 86 (457)
T ss_dssp HHHHSSCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSS--CHHHHHHHHHHHHHHHSSCHHHHHHHHHTT
T ss_pred HHhCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHHCCC--CHHHHHHHHHHHHHHHcCCHHHHHHHHHCC
Confidence 3446789999999999998742 11 111 234588888654 678999999999988632 1 1334
Q ss_pred cHHHHHHHHHh
Q 001875 727 GLLHLVKFYKS 737 (1001)
Q Consensus 727 g~~~L~~~f~~ 737 (1001)
|+..|++..++
T Consensus 87 ~v~~li~~l~~ 97 (457)
T d1xm9a1 87 GIREAVSLLRR 97 (457)
T ss_dssp CHHHHHHHHTT
T ss_pred ChHHHHHHHhc
Confidence 68889887764
Done!