Query 001877
Match_columns 1001
No_of_seqs 376 out of 3044
Neff 9.3
Searched_HMMs 46136
Date Thu Mar 28 11:23:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001877.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001877hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0202 Ca2+ transporting ATPa 100.0 8E-170 2E-174 1403.4 65.0 956 1-979 1-970 (972)
2 TIGR01523 ATPase-IID_K-Na pota 100.0 2E-138 3E-143 1283.7 94.1 935 2-978 5-1048(1053)
3 KOG0204 Calcium transporting A 100.0 2E-139 4E-144 1159.0 57.1 886 8-979 102-1010(1034)
4 COG0474 MgtA Cation transport 100.0 4E-133 8E-138 1225.4 87.8 880 3-973 22-912 (917)
5 TIGR01106 ATPase-IIC_X-K sodiu 100.0 1E-132 2E-137 1238.2 93.0 923 3-989 16-993 (997)
6 TIGR01522 ATPase-IIA2_Ca golgi 100.0 1E-132 2E-137 1228.4 91.8 876 2-978 2-883 (884)
7 TIGR01517 ATPase-IIB_Ca plasma 100.0 8E-130 2E-134 1210.2 90.0 881 8-975 43-939 (941)
8 TIGR01116 ATPase-IIA1_Ca sarco 100.0 8E-130 2E-134 1205.1 88.0 907 53-976 1-917 (917)
9 PRK15122 magnesium-transportin 100.0 5E-128 1E-132 1178.6 87.6 847 2-974 25-894 (903)
10 PRK10517 magnesium-transportin 100.0 2E-127 5E-132 1169.8 84.5 837 2-974 47-894 (902)
11 TIGR01524 ATPase-IIIB_Mg magne 100.0 7E-126 1E-130 1159.5 87.5 837 1-974 12-859 (867)
12 KOG0203 Na+/K+ ATPase, alpha s 100.0 4E-126 8E-131 1051.6 43.6 923 3-989 38-1015(1019)
13 TIGR01657 P-ATPase-V P-type AT 100.0 5E-114 1E-118 1078.7 75.3 833 21-951 137-1045(1054)
14 TIGR01647 ATPase-IIIA_H plasma 100.0 4E-112 9E-117 1025.3 80.5 751 23-935 1-753 (755)
15 TIGR01652 ATPase-Plipid phosph 100.0 5E-109 1E-113 1037.7 67.0 889 36-985 1-1054(1057)
16 PLN03190 aminophospholipid tra 100.0 3E-107 6E-112 1006.7 72.2 886 35-988 86-1152(1178)
17 KOG0208 Cation transport ATPas 100.0 3.3E-98 7E-103 842.1 53.7 891 21-993 158-1138(1140)
18 KOG0206 P-type ATPase [General 100.0 9.9E-99 2E-103 893.4 34.6 895 32-988 28-1087(1151)
19 KOG0210 P-type ATPase [Inorgan 100.0 2.1E-95 5E-100 785.8 35.7 862 31-985 74-1048(1051)
20 PRK14010 potassium-transportin 100.0 3.3E-87 7.1E-92 778.4 57.7 552 56-771 29-589 (673)
21 PRK01122 potassium-transportin 100.0 7.2E-85 1.6E-89 759.5 59.7 554 55-768 29-590 (679)
22 KOG0205 Plasma membrane H+-tra 100.0 3.1E-83 6.7E-88 688.3 42.9 674 6-800 20-697 (942)
23 TIGR01497 kdpB K+-transporting 100.0 2.9E-81 6.4E-86 727.1 59.1 558 55-771 28-594 (675)
24 KOG0209 P-type ATPase [Inorgan 100.0 1.3E-78 2.8E-83 667.8 47.3 839 21-976 160-1149(1160)
25 COG2217 ZntA Cation transport 100.0 6.9E-75 1.5E-79 674.6 52.7 506 86-765 173-679 (713)
26 PRK11033 zntA zinc/cadmium/mer 100.0 9.9E-72 2.1E-76 671.6 56.9 500 86-764 205-707 (741)
27 TIGR01494 ATPase_P-type ATPase 100.0 8E-72 1.7E-76 653.1 50.1 491 95-795 4-497 (499)
28 KOG0207 Cation transport ATPas 100.0 5.4E-72 1.2E-76 631.9 39.7 561 83-801 337-903 (951)
29 TIGR01525 ATPase-IB_hvy heavy 100.0 7.9E-70 1.7E-74 641.4 52.0 509 86-765 17-527 (556)
30 TIGR01512 ATPase-IB2_Cd heavy 100.0 3.4E-69 7.4E-74 631.3 49.6 489 86-766 17-507 (536)
31 TIGR01511 ATPase-IB1_Cu copper 100.0 7E-68 1.5E-72 621.9 55.9 492 86-764 53-545 (562)
32 PRK10671 copA copper exporting 100.0 5.7E-67 1.2E-71 644.6 57.4 505 87-763 286-790 (834)
33 COG2216 KdpB High-affinity K+ 100.0 1E-58 2.2E-63 488.9 37.2 514 98-768 77-592 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 2.9E-34 6.3E-39 302.7 22.3 228 93-337 2-230 (230)
35 KOG4383 Uncharacterized conser 100.0 1.4E-31 3.1E-36 289.2 33.1 473 511-1001 697-1347(1354)
36 PF00689 Cation_ATPase_C: Cati 99.9 4.8E-22 1E-26 201.3 15.2 181 774-974 1-182 (182)
37 PF00702 Hydrolase: haloacid d 99.8 3E-21 6.6E-26 201.9 10.6 97 580-705 115-215 (215)
38 COG4087 Soluble P-type ATPase 99.6 4.9E-15 1.1E-19 129.7 10.6 118 580-727 18-138 (152)
39 PF13246 Hydrolase_like2: Puta 99.5 1E-14 2.3E-19 127.2 7.6 90 415-523 1-90 (91)
40 PF00690 Cation_ATPase_N: Cati 99.5 7.7E-14 1.7E-18 115.2 8.1 69 4-72 1-69 (69)
41 PRK10513 sugar phosphate phosp 99.4 5.9E-13 1.3E-17 144.2 12.9 157 579-738 10-265 (270)
42 PRK15126 thiamin pyrimidine py 99.4 9.5E-13 2.1E-17 142.5 12.6 157 579-738 9-259 (272)
43 COG0561 Cof Predicted hydrolas 99.4 9.5E-13 2.1E-17 141.9 12.4 147 593-739 21-259 (264)
44 PRK10976 putative hydrolase; P 99.4 1.7E-12 3.7E-17 140.2 13.2 157 579-738 9-261 (266)
45 PRK01158 phosphoglycolate phos 99.4 3.7E-12 8E-17 134.5 13.5 147 592-738 20-226 (230)
46 TIGR01487 SPP-like sucrose-pho 99.3 5.4E-12 1.2E-16 131.5 11.9 155 580-737 9-215 (215)
47 PLN02887 hydrolase family prot 99.3 8E-12 1.7E-16 145.2 13.7 66 673-738 507-576 (580)
48 PF08282 Hydrolase_3: haloacid 99.3 1.4E-11 3.1E-16 132.1 12.8 148 590-737 13-254 (254)
49 TIGR01482 SPP-subfamily Sucros 99.3 2.4E-11 5.1E-16 127.9 13.2 147 592-738 15-222 (225)
50 PRK10530 pyridoxal phosphate ( 99.3 2.1E-11 4.6E-16 132.3 11.9 157 579-738 10-268 (272)
51 TIGR01486 HAD-SF-IIB-MPGP mann 99.2 2.2E-10 4.8E-15 122.7 13.8 147 593-739 17-254 (256)
52 TIGR00099 Cof-subfamily Cof su 99.2 1.4E-10 3E-15 124.5 11.1 147 591-737 15-256 (256)
53 PRK03669 mannosyl-3-phosphogly 99.1 4.9E-10 1.1E-14 121.0 14.0 158 578-738 13-265 (271)
54 smart00831 Cation_ATPase_N Cat 99.1 1.2E-10 2.7E-15 94.7 6.8 61 15-75 2-62 (64)
55 PRK11133 serB phosphoserine ph 99.1 4.3E-10 9.3E-15 122.4 12.2 128 592-737 181-315 (322)
56 TIGR02726 phenyl_P_delta pheny 99.1 4.5E-10 9.8E-15 110.1 10.1 107 599-734 41-147 (169)
57 TIGR02137 HSK-PSP phosphoserin 99.0 1.2E-09 2.7E-14 111.3 11.1 127 592-740 68-198 (203)
58 PRK00192 mannosyl-3-phosphogly 99.0 3E-09 6.5E-14 115.0 12.6 157 579-738 11-267 (273)
59 TIGR01670 YrbI-phosphatas 3-de 99.0 2.6E-09 5.7E-14 104.2 10.1 105 600-737 36-145 (154)
60 TIGR02471 sucr_syn_bact_C sucr 98.9 5.4E-09 1.2E-13 110.5 12.2 155 580-739 7-233 (236)
61 COG0560 SerB Phosphoserine pho 98.9 7.3E-09 1.6E-13 106.0 10.6 117 591-727 76-201 (212)
62 COG1778 Low specificity phosph 98.8 8.1E-09 1.8E-13 94.8 7.6 114 599-745 42-163 (170)
63 TIGR01485 SPP_plant-cyano sucr 98.8 3E-08 6.4E-13 105.8 11.0 150 590-739 19-245 (249)
64 PRK09484 3-deoxy-D-manno-octul 98.8 2.9E-08 6.3E-13 99.9 9.7 102 599-733 55-160 (183)
65 TIGR00338 serB phosphoserine p 98.8 3.6E-08 7.8E-13 103.1 10.5 126 592-736 85-218 (219)
66 PLN02382 probable sucrose-phos 98.6 3.9E-07 8.4E-12 103.3 11.9 157 579-738 16-257 (413)
67 KOG1615 Phosphoserine phosphat 98.5 7.2E-08 1.6E-12 91.6 3.9 103 592-711 88-199 (227)
68 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.5 7E-07 1.5E-11 92.0 10.1 117 592-722 80-200 (201)
69 TIGR02461 osmo_MPG_phos mannos 98.5 7.1E-07 1.5E-11 93.0 10.2 51 590-640 13-63 (225)
70 PRK13582 thrH phosphoserine ph 98.4 9.5E-07 2.1E-11 91.3 10.6 125 592-737 68-195 (205)
71 TIGR02463 MPGP_rel mannosyl-3- 98.4 1.7E-06 3.7E-11 90.5 12.0 48 593-640 17-65 (221)
72 PRK08238 hypothetical protein; 98.4 5.6E-05 1.2E-09 87.1 25.0 99 592-716 72-170 (479)
73 PRK12702 mannosyl-3-phosphogly 98.3 5.6E-06 1.2E-10 86.6 10.8 51 590-640 16-66 (302)
74 PF12710 HAD: haloacid dehalog 98.2 2.4E-06 5.3E-11 87.2 7.9 92 595-702 92-192 (192)
75 TIGR03333 salvage_mtnX 2-hydro 98.2 9.6E-06 2.1E-10 84.2 12.1 111 591-711 69-182 (214)
76 PTZ00174 phosphomannomutase; P 98.2 7E-06 1.5E-10 87.2 10.7 54 672-725 187-245 (247)
77 PRK14502 bifunctional mannosyl 98.2 9.4E-06 2E-10 94.5 11.5 46 592-637 433-478 (694)
78 PLN02954 phosphoserine phospha 98.1 1.5E-05 3.2E-10 83.6 11.4 119 592-727 84-215 (224)
79 PRK09552 mtnX 2-hydroxy-3-keto 98.1 1.4E-05 2.9E-10 83.5 10.7 109 592-710 74-185 (219)
80 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.1 1.5E-05 3.3E-10 82.1 9.5 105 590-711 85-197 (202)
81 PRK10187 trehalose-6-phosphate 98.0 2.3E-05 5E-10 83.9 10.7 138 592-737 36-240 (266)
82 PRK13222 phosphoglycolate phos 98.0 3.1E-05 6.8E-10 81.3 11.0 127 591-739 92-223 (226)
83 TIGR01489 DKMTPPase-SF 2,3-dik 98.0 1.8E-05 4E-10 80.4 8.8 114 591-709 71-186 (188)
84 TIGR01488 HAD-SF-IB Haloacid D 98.0 1.1E-05 2.4E-10 81.1 6.9 95 593-704 74-177 (177)
85 COG0546 Gph Predicted phosphat 98.0 2.7E-05 5.9E-10 81.1 9.7 125 590-736 87-216 (220)
86 cd01427 HAD_like Haloacid deha 97.9 1.9E-05 4.1E-10 75.3 7.1 118 588-709 20-138 (139)
87 PF05116 S6PP: Sucrose-6F-phos 97.9 5.5E-05 1.2E-09 80.1 10.6 68 672-739 164-244 (247)
88 TIGR01454 AHBA_synth_RP 3-amin 97.8 8.2E-05 1.8E-09 76.8 9.9 124 592-737 75-203 (205)
89 TIGR01484 HAD-SF-IIB HAD-super 97.8 0.00011 2.4E-09 75.7 9.5 39 592-630 17-55 (204)
90 PRK13223 phosphoglycolate phos 97.7 0.00021 4.5E-09 77.1 10.0 125 591-737 100-229 (272)
91 TIGR01449 PGP_bact 2-phosphogl 97.6 0.00022 4.7E-09 74.2 8.9 116 592-727 85-205 (213)
92 PRK13288 pyrophosphatase PpaX; 97.6 0.00033 7.1E-09 72.8 9.9 124 592-737 82-210 (214)
93 TIGR01544 HAD-SF-IE haloacid d 97.5 0.00089 1.9E-08 70.7 12.1 129 591-737 120-273 (277)
94 PRK10826 2-deoxyglucose-6-phos 97.5 0.00035 7.6E-09 73.1 8.6 117 591-727 91-211 (222)
95 PRK11590 hypothetical protein; 97.5 0.00061 1.3E-08 70.5 9.9 106 592-712 95-203 (211)
96 TIGR01545 YfhB_g-proteo haloac 97.4 0.0006 1.3E-08 70.2 9.4 106 592-711 94-201 (210)
97 PLN02770 haloacid dehalogenase 97.4 0.001 2.2E-08 70.8 10.4 119 592-730 108-230 (248)
98 PRK14501 putative bifunctional 97.3 0.001 2.3E-08 82.1 11.4 152 578-737 498-720 (726)
99 PRK13225 phosphoglycolate phos 97.3 0.0013 2.8E-08 70.7 10.2 121 592-737 142-267 (273)
100 PLN03243 haloacid dehalogenase 97.3 0.0009 2E-08 71.3 8.9 117 592-728 109-227 (260)
101 PRK13226 phosphoglycolate phos 97.3 0.001 2.3E-08 69.8 9.1 116 592-727 95-216 (229)
102 TIGR01672 AphA HAD superfamily 97.2 0.00095 2E-08 69.5 7.5 89 592-707 114-206 (237)
103 smart00775 LNS2 LNS2 domain. T 97.2 0.0023 5E-08 62.4 9.6 102 590-707 25-141 (157)
104 PRK11009 aphA acid phosphatase 97.1 0.0015 3.3E-08 67.9 8.3 88 592-708 114-207 (237)
105 TIGR03351 PhnX-like phosphonat 97.1 0.0021 4.5E-08 67.2 9.0 117 591-727 86-211 (220)
106 PRK13478 phosphonoacetaldehyde 97.1 0.0034 7.3E-08 67.7 10.8 97 592-707 101-198 (267)
107 TIGR01422 phosphonatase phosph 97.1 0.0026 5.7E-08 68.0 9.9 98 592-708 99-197 (253)
108 PLN02575 haloacid dehalogenase 97.0 0.0027 5.9E-08 70.4 9.6 116 592-727 216-333 (381)
109 PRK11587 putative phosphatase; 97.0 0.0041 8.9E-08 64.8 10.1 115 592-727 83-199 (218)
110 TIGR01548 HAD-SF-IA-hyp1 haloa 96.9 0.0029 6.4E-08 64.7 8.5 94 590-704 104-197 (197)
111 TIGR02253 CTE7 HAD superfamily 96.9 0.0024 5.2E-08 66.7 8.0 98 592-711 94-195 (221)
112 COG4359 Uncharacterized conser 96.9 0.0018 3.9E-08 61.7 5.6 106 592-710 73-184 (220)
113 TIGR01428 HAD_type_II 2-haloal 96.7 0.0043 9.3E-08 63.6 8.0 96 592-709 92-189 (198)
114 COG3769 Predicted hydrolase (H 96.7 0.0095 2.1E-07 58.6 9.5 37 596-632 27-63 (274)
115 PHA02530 pseT polynucleotide k 96.7 0.0052 1.1E-07 67.6 8.8 109 588-709 183-293 (300)
116 COG4030 Uncharacterized protei 96.7 0.0065 1.4E-07 59.8 8.0 143 592-738 83-262 (315)
117 PLN02779 haloacid dehalogenase 96.7 0.0076 1.6E-07 65.4 9.5 120 592-729 144-266 (286)
118 PRK14988 GMP/IMP nucleotidase; 96.6 0.0049 1.1E-07 64.4 7.5 99 592-712 93-195 (224)
119 TIGR01662 HAD-SF-IIIA HAD-supe 96.6 0.0075 1.6E-07 57.1 7.9 93 592-708 25-127 (132)
120 TIGR01685 MDP-1 magnesium-depe 96.5 0.01 2.2E-07 58.6 8.5 112 582-710 35-155 (174)
121 PRK06698 bifunctional 5'-methy 96.4 0.016 3.4E-07 67.8 10.5 121 592-737 330-453 (459)
122 PLN02940 riboflavin kinase 96.4 0.011 2.3E-07 67.1 8.5 116 592-727 93-212 (382)
123 PF13419 HAD_2: Haloacid dehal 96.4 0.0055 1.2E-07 61.0 5.7 98 591-708 76-173 (176)
124 TIGR01990 bPGM beta-phosphoglu 96.3 0.006 1.3E-07 61.6 6.0 95 592-708 87-181 (185)
125 TIGR02009 PGMB-YQAB-SF beta-ph 96.2 0.0092 2E-07 60.3 6.7 94 591-708 87-182 (185)
126 PF06888 Put_Phosphatase: Puta 96.2 0.0055 1.2E-07 63.3 4.9 105 592-702 71-187 (234)
127 TIGR01509 HAD-SF-IA-v3 haloaci 96.2 0.014 3.1E-07 58.7 7.7 95 592-707 85-179 (183)
128 PRK08942 D,D-heptose 1,7-bisph 96.1 0.033 7.2E-07 56.0 10.1 98 592-707 29-142 (181)
129 PLN02423 phosphomannomutase 96.1 0.046 9.9E-07 57.9 11.2 40 672-712 188-232 (245)
130 PLN02580 trehalose-phosphatase 96.0 0.036 7.9E-07 61.5 10.5 62 672-737 300-373 (384)
131 TIGR02254 YjjG/YfnB HAD superf 96.0 0.016 3.4E-07 60.7 7.4 93 592-707 97-193 (224)
132 PRK06769 hypothetical protein; 96.0 0.013 2.9E-07 58.3 6.2 113 578-709 10-134 (173)
133 TIGR01668 YqeG_hyp_ppase HAD s 95.9 0.018 3.9E-07 57.2 6.7 86 592-708 43-132 (170)
134 TIGR00213 GmhB_yaeD D,D-heptos 95.8 0.032 6.9E-07 55.8 8.3 122 593-727 27-170 (176)
135 TIGR01533 lipo_e_P4 5'-nucleot 95.8 0.036 7.9E-07 58.7 8.8 86 590-701 116-204 (266)
136 PRK09449 dUMP phosphatase; Pro 95.8 0.029 6.3E-07 58.7 8.1 121 592-737 95-222 (224)
137 TIGR01675 plant-AP plant acid 95.6 0.058 1.3E-06 55.5 9.2 87 591-699 119-210 (229)
138 TIGR02252 DREG-2 REG-2-like, H 95.6 0.026 5.6E-07 58.0 6.9 93 592-707 105-200 (203)
139 PLN02811 hydrolase 95.6 0.043 9.4E-07 57.2 8.4 98 592-709 78-181 (220)
140 TIGR01549 HAD-SF-IA-v1 haloaci 95.5 0.029 6.3E-07 54.7 6.5 90 593-705 65-154 (154)
141 TIGR01656 Histidinol-ppas hist 95.5 0.03 6.4E-07 54.2 6.4 99 592-709 27-142 (147)
142 PLN03017 trehalose-phosphatase 95.4 0.15 3.3E-06 56.2 11.8 48 578-626 117-166 (366)
143 TIGR01261 hisB_Nterm histidino 95.4 0.036 7.8E-07 54.3 6.4 95 592-709 29-144 (161)
144 TIGR01691 enolase-ppase 2,3-di 95.4 0.053 1.1E-06 56.0 8.0 99 590-710 93-194 (220)
145 smart00577 CPDc catalytic doma 95.4 0.014 3E-07 56.5 3.5 95 592-709 45-139 (148)
146 PLN02919 haloacid dehalogenase 95.2 0.076 1.6E-06 68.1 10.3 133 592-745 161-299 (1057)
147 TIGR01681 HAD-SF-IIIC HAD-supe 95.0 0.061 1.3E-06 50.5 6.7 86 592-703 29-126 (128)
148 COG2179 Predicted hydrolase of 94.9 0.1 2.2E-06 49.7 7.5 86 591-707 45-133 (175)
149 PLN02205 alpha,alpha-trehalose 94.8 0.1 2.2E-06 64.9 9.7 51 578-628 602-653 (854)
150 TIGR01664 DNA-3'-Pase DNA 3'-p 94.8 0.089 1.9E-06 51.9 7.5 92 593-708 43-158 (166)
151 TIGR01459 HAD-SF-IIA-hyp4 HAD- 94.8 0.23 5E-06 52.5 11.1 94 585-706 17-116 (242)
152 TIGR01686 FkbH FkbH-like domai 94.8 0.074 1.6E-06 58.9 7.5 90 592-710 31-128 (320)
153 KOG3120 Predicted haloacid deh 94.6 0.04 8.6E-07 54.6 4.1 116 592-711 84-209 (256)
154 PRK05446 imidazole glycerol-ph 94.3 0.095 2.1E-06 58.0 7.0 100 591-709 29-145 (354)
155 TIGR00685 T6PP trehalose-phosp 94.2 0.066 1.4E-06 56.7 5.4 66 668-737 162-239 (244)
156 TIGR02247 HAD-1A3-hyp Epoxide 93.8 0.078 1.7E-06 54.8 4.9 95 592-708 94-192 (211)
157 PF08235 LNS2: LNS2 (Lipin/Ned 93.5 0.33 7.2E-06 46.6 8.1 101 591-707 26-141 (157)
158 PLN02645 phosphoglycolate phos 93.5 0.19 4E-06 55.4 7.5 48 585-632 37-87 (311)
159 PRK09456 ?-D-glucose-1-phospha 93.5 0.2 4.3E-06 51.3 7.2 96 592-709 84-182 (199)
160 PF09419 PGP_phosphatase: Mito 93.0 0.33 7.2E-06 47.4 7.4 86 590-705 57-157 (168)
161 PF13344 Hydrolase_6: Haloacid 92.9 0.19 4.2E-06 44.8 5.3 49 585-633 7-58 (101)
162 TIGR01993 Pyr-5-nucltdase pyri 92.8 0.32 6.9E-06 49.0 7.4 96 592-708 84-181 (184)
163 PLN02177 glycerol-3-phosphate 92.4 0.76 1.6E-05 53.6 10.5 100 593-712 111-215 (497)
164 PRK10725 fructose-1-P/6-phosph 92.3 0.28 6.1E-06 49.5 6.3 90 598-708 93-182 (188)
165 PRK10563 6-phosphogluconate ph 91.7 0.34 7.3E-06 50.5 6.2 97 592-710 88-184 (221)
166 TIGR01457 HAD-SF-IIA-hyp2 HAD- 91.7 0.96 2.1E-05 48.0 9.7 46 589-634 14-62 (249)
167 TIGR01689 EcbF-BcbF capsule bi 91.2 0.69 1.5E-05 42.9 6.9 33 591-623 23-55 (126)
168 PHA02597 30.2 hypothetical pro 90.6 0.44 9.6E-06 48.5 5.7 94 592-709 74-171 (197)
169 COG0637 Predicted phosphatase/ 90.5 0.8 1.7E-05 47.6 7.5 99 591-709 85-183 (221)
170 COG3700 AphA Acid phosphatase 89.8 0.42 9.1E-06 45.6 4.1 90 593-710 115-210 (237)
171 PF03767 Acid_phosphat_B: HAD 89.6 0.67 1.4E-05 48.3 6.0 89 591-700 114-207 (229)
172 TIGR01680 Veg_Stor_Prot vegeta 87.4 3.4 7.3E-05 43.6 9.3 44 590-633 143-189 (275)
173 KOG3040 Predicted sugar phosph 87.3 1.9 4.2E-05 42.6 7.0 51 582-632 13-66 (262)
174 PLN02151 trehalose-phosphatase 86.4 4.1 8.8E-05 45.1 9.8 49 578-627 104-154 (354)
175 TIGR01684 viral_ppase viral ph 86.4 1.3 2.8E-05 47.2 5.7 42 593-634 146-188 (301)
176 PRK10748 flavin mononucleotide 85.2 1.4 3.1E-05 46.3 5.6 91 592-710 113-206 (238)
177 TIGR01452 PGP_euk phosphoglyco 84.4 4.1 9E-05 44.0 8.8 44 590-633 16-62 (279)
178 PF02358 Trehalose_PPase: Treh 83.6 4.8 0.0001 42.3 8.7 60 668-727 160-233 (235)
179 COG1011 Predicted hydrolase (H 83.5 3.4 7.4E-05 43.0 7.6 93 592-707 99-194 (229)
180 TIGR01458 HAD-SF-IIA-hyp3 HAD- 83.3 1.3 2.9E-05 47.2 4.3 40 593-632 22-64 (257)
181 PRK10444 UMP phosphatase; Prov 82.6 1.2 2.6E-05 47.1 3.7 45 585-629 10-54 (248)
182 PF05822 UMPH-1: Pyrimidine 5' 82.0 8.3 0.00018 40.1 9.2 133 591-737 89-241 (246)
183 PHA03398 viral phosphatase sup 81.9 2.6 5.6E-05 44.9 5.7 42 593-634 148-190 (303)
184 COG0241 HisB Histidinol phosph 81.8 2 4.4E-05 42.4 4.6 97 593-707 32-144 (181)
185 TIGR02251 HIF-SF_euk Dullard-l 80.5 1.1 2.4E-05 44.0 2.2 94 589-709 39-136 (162)
186 TIGR01493 HAD-SF-IA-v2 Haloaci 78.1 2.2 4.9E-05 42.3 3.8 84 592-704 90-175 (175)
187 COG0647 NagD Predicted sugar p 77.3 5.4 0.00012 42.4 6.4 109 584-729 16-130 (269)
188 COG1877 OtsB Trehalose-6-phosp 75.9 14 0.0003 39.2 8.9 48 580-627 26-76 (266)
189 PRK14194 bifunctional 5,10-met 74.3 15 0.00033 39.7 8.8 140 589-728 12-210 (301)
190 TIGR01663 PNK-3'Pase polynucle 73.6 7.6 0.00017 45.6 6.9 40 593-632 198-249 (526)
191 TIGR02244 HAD-IG-Ncltidse HAD 71.4 16 0.00035 40.4 8.4 107 594-707 186-318 (343)
192 PRK14188 bifunctional 5,10-met 69.2 29 0.00062 37.6 9.6 62 666-727 137-208 (296)
193 PF13242 Hydrolase_like: HAD-h 66.1 10 0.00022 31.5 4.3 53 675-727 11-71 (75)
194 COG2503 Predicted secreted aci 65.9 27 0.00059 35.8 7.9 86 592-703 122-211 (274)
195 PRK14170 bifunctional 5,10-met 65.9 45 0.00097 35.8 10.0 47 589-635 10-65 (284)
196 PRK14169 bifunctional 5,10-met 63.8 48 0.001 35.5 9.8 138 590-727 10-206 (282)
197 PF12689 Acid_PPase: Acid Phos 63.6 23 0.0005 34.8 6.9 98 592-710 45-147 (169)
198 PRK14184 bifunctional 5,10-met 60.6 72 0.0016 34.3 10.4 62 666-727 136-211 (286)
199 TIGR01458 HAD-SF-IIA-hyp3 HAD- 60.2 8 0.00017 41.2 3.4 98 594-709 122-221 (257)
200 KOG3085 Predicted hydrolase (H 60.1 18 0.00039 37.6 5.7 104 593-719 114-221 (237)
201 PRK14174 bifunctional 5,10-met 59.4 48 0.001 35.9 9.0 62 666-727 138-213 (295)
202 PRK14182 bifunctional 5,10-met 59.3 74 0.0016 34.1 10.2 46 590-635 10-64 (282)
203 PRK14189 bifunctional 5,10-met 59.0 48 0.001 35.6 8.9 62 666-727 137-208 (285)
204 PRK14179 bifunctional 5,10-met 59.0 49 0.0011 35.5 8.9 62 666-727 137-208 (284)
205 PF06570 DUF1129: Protein of u 58.7 1.5E+02 0.0033 30.2 12.3 15 804-818 60-74 (206)
206 TIGR01456 CECR5 HAD-superfamil 57.4 43 0.00093 37.0 8.6 49 585-633 9-65 (321)
207 PF00389 2-Hacid_dh: D-isomer 56.5 1.6E+02 0.0034 27.5 11.2 84 589-710 3-88 (133)
208 PRK14166 bifunctional 5,10-met 56.0 85 0.0018 33.7 10.0 62 666-727 136-207 (282)
209 PRK14172 bifunctional 5,10-met 55.9 86 0.0019 33.6 10.1 62 666-727 137-208 (278)
210 PRK14186 bifunctional 5,10-met 54.6 77 0.0017 34.3 9.5 61 667-727 138-208 (297)
211 TIGR01459 HAD-SF-IIA-hyp4 HAD- 54.5 11 0.00023 39.8 3.2 96 594-708 140-237 (242)
212 PRK14190 bifunctional 5,10-met 54.5 79 0.0017 34.0 9.6 62 666-727 137-208 (284)
213 PRK14167 bifunctional 5,10-met 53.9 90 0.0019 33.8 9.9 46 590-635 11-65 (297)
214 PLN02897 tetrahydrofolate dehy 53.9 98 0.0021 34.2 10.2 62 666-727 193-264 (345)
215 PLN03190 aminophospholipid tra 53.5 2.4E+02 0.0053 37.2 15.5 47 111-164 152-198 (1178)
216 PRK14185 bifunctional 5,10-met 49.4 1.3E+02 0.0029 32.4 10.3 45 590-634 10-64 (293)
217 PRK14175 bifunctional 5,10-met 49.2 77 0.0017 34.1 8.5 46 589-634 11-65 (286)
218 PRK14177 bifunctional 5,10-met 47.5 1.4E+02 0.0031 32.1 10.1 62 666-727 138-209 (284)
219 TIGR01460 HAD-SF-IIA Haloacid 47.2 31 0.00068 36.1 5.3 48 585-632 7-58 (236)
220 TIGR01652 ATPase-Plipid phosph 47.0 3.6E+02 0.0077 35.4 15.8 200 110-319 65-323 (1057)
221 PRK14193 bifunctional 5,10-met 47.0 1.2E+02 0.0026 32.6 9.5 46 589-634 11-65 (284)
222 PRK14176 bifunctional 5,10-met 46.7 1E+02 0.0023 33.1 9.0 61 666-726 143-213 (287)
223 PLN02616 tetrahydrofolate dehy 46.3 1.3E+02 0.0029 33.3 9.8 62 666-727 210-281 (364)
224 TIGR01657 P-ATPase-V P-type AT 45.7 5.5E+02 0.012 33.7 17.2 228 97-359 200-450 (1054)
225 PF13380 CoA_binding_2: CoA bi 45.3 25 0.00054 32.2 3.6 41 592-632 63-104 (116)
226 PRK14180 bifunctional 5,10-met 44.5 1.6E+02 0.0035 31.6 10.0 62 666-727 137-208 (282)
227 TIGR01452 PGP_euk phosphoglyco 44.3 1.4E+02 0.0029 32.2 9.8 111 579-709 132-244 (279)
228 PRK11507 ribosome-associated p 43.9 29 0.00063 28.3 3.3 26 127-152 38-63 (70)
229 PRK14183 bifunctional 5,10-met 42.7 1.7E+02 0.0036 31.5 9.7 60 668-727 138-207 (281)
230 PRK10792 bifunctional 5,10-met 42.6 1.6E+02 0.0034 31.8 9.5 62 666-727 138-209 (285)
231 PRK14187 bifunctional 5,10-met 41.7 2.1E+02 0.0045 31.0 10.3 62 666-727 139-210 (294)
232 PRK14171 bifunctional 5,10-met 40.8 1.6E+02 0.0035 31.7 9.3 62 666-727 138-209 (288)
233 COG0190 FolD 5,10-methylene-te 39.2 2.1E+02 0.0046 30.6 9.6 60 668-727 137-206 (283)
234 PF13275 S4_2: S4 domain; PDB: 38.9 16 0.00035 29.4 1.1 24 127-150 34-57 (65)
235 PF03120 DNA_ligase_OB: NAD-de 38.2 14 0.00031 31.3 0.7 22 137-158 45-67 (82)
236 PRK14178 bifunctional 5,10-met 37.8 1.6E+02 0.0034 31.7 8.6 62 666-727 131-202 (279)
237 PF06506 PrpR_N: Propionate ca 36.9 1.8E+02 0.0038 28.8 8.6 108 595-749 64-172 (176)
238 TIGR01517 ATPase-IIB_Ca plasma 36.4 2.3E+02 0.0051 36.5 11.6 20 145-164 174-193 (941)
239 PRK14168 bifunctional 5,10-met 36.3 2.6E+02 0.0057 30.3 10.1 62 666-727 140-215 (297)
240 TIGR02250 FCP1_euk FCP1-like p 36.0 47 0.001 32.2 4.1 42 591-633 57-98 (156)
241 CHL00200 trpA tryptophan synth 35.7 2.2E+02 0.0047 30.4 9.4 43 671-713 187-233 (263)
242 cd05017 SIS_PGI_PMI_1 The memb 35.1 73 0.0016 29.1 5.1 38 592-631 54-91 (119)
243 cd00860 ThrRS_anticodon ThrRS 35.1 1E+02 0.0022 26.2 5.8 48 586-633 6-54 (91)
244 COG1916 Uncharacterized homolo 34.4 3E+02 0.0064 30.5 9.9 41 592-632 96-136 (388)
245 PRK14191 bifunctional 5,10-met 34.4 1E+02 0.0022 33.2 6.5 61 667-727 137-207 (285)
246 PRK05585 yajC preprotein trans 34.3 1E+02 0.0022 27.7 5.5 13 141-153 52-64 (106)
247 TIGR00739 yajC preprotein tran 33.5 98 0.0021 26.5 5.1 13 141-153 37-49 (84)
248 PF12368 DUF3650: Protein of u 32.6 37 0.00079 22.2 1.7 15 21-35 13-27 (28)
249 PLN02516 methylenetetrahydrofo 32.1 3.1E+02 0.0066 29.8 9.7 61 667-727 147-217 (299)
250 PRK10747 putative protoheme IX 31.3 80 0.0017 36.1 5.7 45 945-989 33-78 (398)
251 COG1188 Ribosome-associated he 30.5 55 0.0012 28.8 3.1 28 127-155 35-62 (100)
252 cd04728 ThiG Thiazole synthase 30.3 6.2E+02 0.013 26.6 11.1 50 579-628 91-143 (248)
253 PF15584 Imm44: Immunity prote 30.2 24 0.00053 30.1 0.9 19 144-162 13-31 (94)
254 PLN02591 tryptophan synthase 29.7 3.1E+02 0.0068 29.0 9.3 100 591-713 114-220 (250)
255 COG0474 MgtA Cation transport 29.6 7.6E+02 0.016 31.8 14.4 187 142-343 145-344 (917)
256 PF05761 5_nucleotid: 5' nucle 29.2 97 0.0021 35.8 5.8 106 594-703 185-314 (448)
257 PF11019 DUF2608: Protein of u 29.0 1.4E+02 0.0031 31.6 6.7 102 593-701 82-194 (252)
258 PRK05886 yajC preprotein trans 27.9 1.2E+02 0.0027 27.3 4.9 6 146-151 61-66 (109)
259 PTZ00445 p36-lilke protein; Pr 27.5 43 0.00093 34.0 2.3 29 593-621 76-104 (219)
260 PF12710 HAD: haloacid dehalog 26.7 31 0.00067 34.5 1.2 13 344-356 1-13 (192)
261 PF01455 HupF_HypC: HupF/HypC 26.3 1.4E+02 0.0029 24.4 4.5 32 123-154 16-50 (68)
262 PRK14173 bifunctional 5,10-met 26.3 4.4E+02 0.0095 28.5 9.7 62 666-727 134-205 (287)
263 COG0279 GmhA Phosphoheptose is 25.3 82 0.0018 30.6 3.5 45 580-626 110-154 (176)
264 PF03129 HGTP_anticodon: Antic 25.3 1.6E+02 0.0035 25.3 5.4 49 585-633 3-55 (94)
265 TIGR01524 ATPase-IIIB_Mg magne 25.1 1E+03 0.022 30.5 14.3 120 145-267 139-267 (867)
266 cd05008 SIS_GlmS_GlmD_1 SIS (S 24.7 77 0.0017 29.1 3.4 30 593-622 58-87 (126)
267 cd05014 SIS_Kpsf KpsF-like pro 24.6 57 0.0012 30.1 2.5 33 593-625 59-91 (128)
268 COG3071 HemY Uncharacterized e 24.4 1.9E+02 0.004 32.3 6.5 39 953-991 41-80 (400)
269 cd00859 HisRS_anticodon HisRS 24.1 1.8E+02 0.0039 24.3 5.4 47 586-632 6-53 (91)
270 PF05240 APOBEC_C: APOBEC-like 23.1 1.1E+02 0.0023 23.8 3.1 25 595-619 2-26 (55)
271 PRK08433 flagellar motor switc 22.9 48 0.001 30.0 1.5 44 112-160 20-63 (111)
272 PF02699 YajC: Preprotein tran 22.9 1.1E+02 0.0024 26.0 3.6 14 140-153 35-48 (82)
273 PF09926 DUF2158: Uncharacteri 22.7 55 0.0012 25.2 1.5 12 143-154 2-13 (53)
274 KOG2882 p-Nitrophenyl phosphat 22.5 1.1E+02 0.0023 32.9 4.1 48 585-632 31-81 (306)
275 cd05710 SIS_1 A subgroup of th 22.3 78 0.0017 29.0 2.9 30 593-622 59-88 (120)
276 TIGR01522 ATPase-IIA2_Ca golgi 22.3 7.5E+02 0.016 31.7 12.5 37 144-181 124-160 (884)
277 PF06941 NT5C: 5' nucleotidase 22.2 61 0.0013 32.6 2.3 29 592-620 73-101 (191)
278 KOG2914 Predicted haloacid-hal 22.0 2.5E+02 0.0054 29.1 6.6 114 593-725 93-212 (222)
279 PF04273 DUF442: Putative phos 21.7 2.4E+02 0.0052 25.5 5.7 39 597-635 16-62 (110)
280 TIGR00262 trpA tryptophan synt 21.6 5.4E+02 0.012 27.3 9.4 42 588-629 120-163 (256)
281 COG1862 YajC Preprotein transl 20.9 1.8E+02 0.004 25.6 4.6 13 141-153 43-55 (97)
282 PF05297 Herpes_LMP1: Herpesvi 20.9 32 0.0007 35.8 0.0 16 948-963 166-181 (381)
283 PF03904 DUF334: Domain of unk 20.8 2.2E+02 0.0048 29.1 5.7 12 955-966 201-212 (230)
284 PRK14181 bifunctional 5,10-met 20.7 7.2E+02 0.016 26.9 10.0 62 666-727 132-207 (287)
285 TIGR00540 hemY_coli hemY prote 20.6 1.6E+02 0.0035 33.7 5.7 41 949-989 37-78 (409)
286 PRK00208 thiG thiazole synthas 20.3 1E+03 0.022 25.0 11.3 50 579-628 91-143 (250)
287 COG0309 HypE Hydrogenase matur 20.1 3.6E+02 0.0077 29.7 7.5 85 586-693 219-307 (339)
288 PF08645 PNK3P: Polynucleotide 20.1 82 0.0018 30.7 2.6 24 594-617 31-54 (159)
289 smart00306 HintN Hint (Hedgeho 20.0 1E+02 0.0022 26.8 3.1 26 126-151 74-99 (100)
No 1
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.1e-170 Score=1403.44 Aligned_cols=956 Identities=56% Similarity=0.867 Sum_probs=882.4
Q ss_pred CcccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHhcchHHHHHHHHHHHHHHHHHhcC
Q 001877 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALING 80 (1001)
Q Consensus 1 ~~~~~~~~~~~~~~~l~~~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~~i~~~~~~~~~~ 80 (1001)
|.++|..+++|+++.|++|+.+|||++|+.+|++.||.|+++.....++|+.+++||.+++..+|+.++++||.+.
T Consensus 1 t~~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~---- 76 (972)
T KOG0202|consen 1 TEEAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA---- 76 (972)
T ss_pred CcchhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH----
Confidence 6789999999999999999999999999999999999999999999999999999999999999999999999885
Q ss_pred CCCcccchhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEECCeEEEeeCCCCCCCcEEEecCCCccCCcE
Q 001877 81 ETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADM 160 (1001)
Q Consensus 81 ~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~ 160 (1001)
.|.++++|.+++++|+.++++||||++|++++|+++.|..++|+|+|+.+.+++++|||||||.|+.||+||||.
T Consensus 77 -----~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADl 151 (972)
T KOG0202|consen 77 -----DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADL 151 (972)
T ss_pred -----hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccce
Confidence 345788899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeecCCceEEecccccCCCcccccchhhhc-ccccccCCCCceEEecceeecceEEEEEEEecccccchhHHHHhccC
Q 001877 161 RMIEMLSNQLRVDQAILTGESCSVEKELDSII-ATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQT 239 (1001)
Q Consensus 161 ~ll~~~~g~~~Vdes~LtGEs~pv~k~~~~~~-~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~ 239 (1001)
||++. -++.||||+|||||.|+.|...... .+.....++.|++|+||.|..|.++|+|+.||.+|.+|++.+.+...
T Consensus 152 Rl~e~--~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~ 229 (972)
T KOG0202|consen 152 RLIEA--KSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQAT 229 (972)
T ss_pred eEEee--eeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhcc
Confidence 99984 4599999999999999999887766 66778899999999999999999999999999999999999999999
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcc-chHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHh
Q 001877 240 EDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGG-FLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALG 318 (1001)
Q Consensus 240 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~ 318 (1001)
+..+||||++++.+...+..++.++|+.+|++++.++.++.+.+ |++....+|..++++.+++||++||+.++++++.+
T Consensus 230 e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG 309 (972)
T KOG0202|consen 230 ESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALG 309 (972)
T ss_pred CCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHh
Confidence 99999999999999999998899999999999888877666655 78888999999999999999999999999999999
Q ss_pred hHhhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEeccccCCCceeeeeecCcccCCCCccccCCCccc
Q 001877 319 TKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQL 398 (1001)
Q Consensus 319 ~~~l~~~~i~~k~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (1001)
.+||+|+++++|+++++|+||.+++||+|||||||+|+|++.++++.+...... .++..+|..|++.+..+.+.....
T Consensus 310 ~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~--~~f~~tg~ty~~~g~v~~~~~~~~ 387 (972)
T KOG0202|consen 310 TRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATV--DEFNPTGTTYSPEGEVFKDGLYEK 387 (972)
T ss_pred HHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccc--cccccCCceeCCCCceEecCcccc
Confidence 999999999999999999999999999999999999999999999987655432 567778999999988877664444
Q ss_pred cCCCChHHHHHHHHHhcccccccccccCCCCcceeccCchHHHHHHHHHHcCCCCCCCcchhhhhhhhcccccccCcccc
Q 001877 399 EFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWE 478 (1001)
Q Consensus 399 ~~~~~~~~~~~~~~~~~lc~~~~~~~~~~~~~~~~~~~~~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (1001)
+.....+.+.+++.+.++||++...+++. +.+...|.|+|.||..+++++|+.....+ ..++++ ...+++.+.
T Consensus 388 ~~~~~~~~l~~l~~i~~lCNda~v~~~~~-~~~~~~G~pTE~AL~vlaeKm~l~~~~~~-----~~s~~~-~~~c~~~~~ 460 (972)
T KOG0202|consen 388 DKAGDNDLLQELAEICALCNDATVEYNDA-DCYEKVGEPTEGALIVLAEKMGLPGTRST-----NLSNEE-ASACNRVYS 460 (972)
T ss_pred ccccccHHHHHHHHHHHhhhhhhhhcCch-hhHHhcCCchHHHHHHHHHHcCCCcchhh-----cccccc-cccchhHHH
Confidence 34456788999999999999999887766 77888999999999999999998764311 111222 335666778
Q ss_pred ccccEEEEecCCCCCceEEEEEeeCC---eEEEEEeCChhHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhhhh
Q 001877 479 IEFKKVSILEFSRDRKMMSVLCSHKQ---MCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEA 555 (1001)
Q Consensus 479 ~~~~~l~~~~F~s~~k~msviv~~~~---~~~l~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 555 (1001)
..++...++||+|+||+|||.+.++. .+.+|+|||+|.|+++|++++.++++...|+++..|+.+.+...++++ +|
T Consensus 461 ~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~-~g 539 (972)
T KOG0202|consen 461 RLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGS-EG 539 (972)
T ss_pred HhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhh-cc
Confidence 88899999999999999999998753 378999999999999999988774556699999999999999999998 99
Q ss_pred hHHHHHHhccCCc-cc------ccCccc-cCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHH
Q 001877 556 LRCLALALKQMPI-NR------QTLSYD-DEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICH 627 (1001)
Q Consensus 556 ~r~l~~a~k~l~~-~~------~~~~~~-~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~ 627 (1001)
+|||++|++..+. .. +...+. .|.||+|+|++|+.||+|++++++|+.|+++||+|.|+|||+..||.+||+
T Consensus 540 LRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r 619 (972)
T KOG0202|consen 540 LRVLALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAR 619 (972)
T ss_pred ceEEEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHH
Confidence 9999999997763 11 122333 799999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCce
Q 001877 628 KIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG 707 (1001)
Q Consensus 628 ~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vg 707 (1001)
++|+.....+..+.+++|++++.++++++........+|+|++|.+|.++|+.||++|+.|+|+|||+||+|+||.||||
T Consensus 620 ~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIG 699 (972)
T KOG0202|consen 620 EIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIG 699 (972)
T ss_pred HhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccc
Confidence 99999888888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEec-CccHHHHhhcCeeecCCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHH
Q 001877 708 IAMG-SGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQLLWVN 786 (1001)
Q Consensus 708 Iam~-~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~ 786 (1001)
|||| +|++++|+|||+|+.||||..|+.+++|||.+|.|+++++.|+++.|+..+..++++..+++|.|++|+|+||+|
T Consensus 700 IAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiN 779 (972)
T KOG0202|consen 700 IAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWIN 779 (972)
T ss_pred eeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheee
Confidence 9999 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhhhcccCCCccccccCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccccccccccC
Q 001877 787 LVTDGLPATAIGFNKQDSDVMKAKPRKVSEAVVTGWLFFRYLVIGAYVGVATVAGFIWWYVYSNEGPKLPYSELMNFDSC 866 (1001)
Q Consensus 787 ~~~~~~p~~~l~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 866 (1001)
+++|++|+.+||++|+|+++|++|||+++++++++|.+++++..|+++++++++.|.+|+... +..+.+.++.+|..|
T Consensus 780 lvtDG~PA~aLG~ep~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~--~~~vt~~~~~~~~~c 857 (972)
T KOG0202|consen 780 LVTDGPPATALGFEPVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGA--DGKVTYRQLAHYNSC 857 (972)
T ss_pred eeccCCchhhcCCCCCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcC--CCCcChhhhcchhhh
Confidence 999999999999999999999999999999999999999999999999999998888887653 456777888888888
Q ss_pred CCCCCCCCCCccCCCcchhhHHHHHHHHHHHHHHHhcccCccccccCCCcchHHHHHHHHHHHHHHHHHhcccccccccc
Q 001877 867 STRETTHPCSIFEDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVASIILTMFLHILILYVPPLSVLFSV 946 (1001)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~ti~f~~lv~~~~~~~~~~~~~~~s~~~~~~~~n~~l~~~i~~~~~l~~~i~~~p~~~~~f~~ 946 (1001)
..-|....|.+|+.....|++|+.+++..+||+++|++.++|+|..++|+|+|+++++.++++++++++|+|+++..|++
T Consensus 858 ~~~~~~~~c~~F~~~~~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~ilYvp~l~~iFq~ 937 (972)
T KOG0202|consen 858 CRDFYGSRCAVFEDMCPLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLVLYVPPLQRIFQT 937 (972)
T ss_pred cccccccchhhhcccccceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhheEEEechhhhhhee
Confidence 88777788889977788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 001877 947 TPLSWADWTAVFYLSFPVIIIDEVLKFFSRKSS 979 (1001)
Q Consensus 947 ~~l~~~~w~~~~~~~~~~l~~~e~~K~~~r~~~ 979 (1001)
+++++.+|++++.+++.+++++|++|++.|.+.
T Consensus 938 ~~l~~~ew~~vl~~s~~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 938 EPLSLAEWLLVLAISSPVIIVDEILKFIARNYF 970 (972)
T ss_pred cCCcHHHHHHHHHHhhhhhhHHHHHHHHHHhcc
Confidence 999999999999999999999999999999764
No 2
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=1.5e-138 Score=1283.68 Aligned_cols=935 Identities=28% Similarity=0.454 Sum_probs=768.7
Q ss_pred cccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHhcchHHHHHHHHHHHHHHHHHhcCC
Q 001877 2 EDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGE 81 (1001)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~~i~~~~~~~~~~~ 81 (1001)
.+||..+++|+++.|++++.+|||++||++|+++||+|+++.++++++|+.+++||.+++.++++++++++++.
T Consensus 5 ~~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~------ 78 (1053)
T TIGR01523 5 NAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAM------ 78 (1053)
T ss_pred CchhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHH------
Confidence 47899999999999999988999999999999999999999998889999999999999999999999999976
Q ss_pred CCcccchhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEECCeEEEeeCCCCCCCcEEEecCCCccCCcEE
Q 001877 82 TGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMR 161 (1001)
Q Consensus 82 ~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ 161 (1001)
+.|.++++|+++++++..++++||+|+++++++|+++.+.+++|+|||++++|+++||||||||.|++||+|||||+
T Consensus 79 ---~~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~r 155 (1053)
T TIGR01523 79 ---HDWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLR 155 (1053)
T ss_pred ---hhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEE
Confidence 36788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeecCCceEEecccccCCCcccccchhhhc--ccccccCCCCceEEecceeecceEEEEEEEecccccchhHHHHhccC
Q 001877 162 MIEMLSNQLRVDQAILTGESCSVEKELDSII--ATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQT 239 (1001)
Q Consensus 162 ll~~~~g~~~Vdes~LtGEs~pv~k~~~~~~--~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~ 239 (1001)
|++ ++++.||||+|||||.|+.|.+.... ..+.+..++.|++|+||.|.+|++.++|++||.+|.+|++.+++...
T Consensus 156 Li~--~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~ 233 (1053)
T TIGR01523 156 LIE--TKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGD 233 (1053)
T ss_pred EEE--eCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhh
Confidence 997 67899999999999999999875432 12344567889999999999999999999999999999999988543
Q ss_pred CC-----------------------------------CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccc
Q 001877 240 ED-----------------------------------EVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGF 284 (1001)
Q Consensus 240 ~~-----------------------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (1001)
+. .+||++++++++++++..+.++++++++++....
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~~--------- 304 (1053)
T TIGR01523 234 GGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKFD--------- 304 (1053)
T ss_pred hhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---------
Confidence 21 2499999999999998888887777776643211
Q ss_pred hHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhHhhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEE
Q 001877 285 LRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICV 364 (1001)
Q Consensus 285 ~~~~~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~i~~k~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~ 364 (1001)
.....+.++++++++++|++||++++++++.+++||+++++++|+++++|+||++++||+|||||||+|+|+|++++.
T Consensus 305 --~~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~ 382 (1053)
T TIGR01523 305 --VDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWI 382 (1053)
T ss_pred --hhHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEE
Confidence 112345567899999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred eccccCCCceeeeeec--CcccCCC-Cc---------------------cccCC--Cccc-cCC--CChHHHHHHHHHhc
Q 001877 365 VHSVQQGPIIAEYGVT--GTTYAPE-GV---------------------VFDSS--GIQL-EFP--AQLPCLLHIARCSA 415 (1001)
Q Consensus 365 ~~~~~~~~~~~~~~~~--~~~~~~~-~~---------------------~~~~~--~~~~-~~~--~~~~~~~~~~~~~~ 415 (1001)
.+... +.+. +..|.++ +. ..... ..+. +.. ...+.+.+++.+++
T Consensus 383 ~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~ 455 (1053)
T TIGR01523 383 PRFGT-------ISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAA 455 (1053)
T ss_pred cCCce-------EEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHH
Confidence 53100 0011 1111111 00 00000 0000 000 01234567888889
Q ss_pred ccccccccccCCCCcceeccCchHHHHHHHHHHcCCCCCCCc-chhhhhhhh-c--ccccccCccccccccEEEEecCCC
Q 001877 416 LCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSM-PSALNMLSK-H--ERASYCNHHWEIEFKKVSILEFSR 491 (1001)
Q Consensus 416 lc~~~~~~~~~~~~~~~~~~~~~e~al~~~a~~~g~~~~~~~-~~~~~~~~~-~--~~~~~~~~~~~~~~~~l~~~~F~s 491 (1001)
+||++....+...+.+...|||+|.||+.++.+.|++..... ......... . ............+|+++.++||+|
T Consensus 456 lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds 535 (1053)
T TIGR01523 456 LANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDS 535 (1053)
T ss_pred hccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCC
Confidence 999876543222233445799999999999998886421000 000000000 0 000000011234689999999999
Q ss_pred CCceEEEEEeeC-C-eEEEEEeCChhHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCcc
Q 001877 492 DRKMMSVLCSHK-Q-MCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPIN 569 (1001)
Q Consensus 492 ~~k~msviv~~~-~-~~~l~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~l~~~ 569 (1001)
+|||||++++++ + ++++|+|||||.|+++|+.+..++++...+++++.++++.+..+++++ +|+||+++|||.++..
T Consensus 536 ~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~-~GlRvLa~A~r~l~~~ 614 (1053)
T TIGR01523 536 EIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAA-EGLRVLAFASKSFDKA 614 (1053)
T ss_pred CCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHh-cCCeEEEEEEEECCch
Confidence 999999999875 3 578999999999999999765442234678999999999999999998 9999999999988753
Q ss_pred ccc--------Ccc-ccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccc---
Q 001877 570 RQT--------LSY-DDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVD--- 637 (1001)
Q Consensus 570 ~~~--------~~~-~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~--- 637 (1001)
+.. ... +.|+|++|+|+++++|++|++++++|++||++||+++|+|||++.||.++|+++||......
T Consensus 615 ~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~ 694 (1053)
T TIGR01523 615 DNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDR 694 (1053)
T ss_pred hccchhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccc
Confidence 211 011 26899999999999999999999999999999999999999999999999999999753211
Q ss_pred ---cccccccchhhccCChHHHHHhhccceEEEEeChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEEec-Cc
Q 001877 638 ---FVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG-SG 713 (1001)
Q Consensus 638 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIam~-~~ 713 (1001)
....+++|.+++.+.++++.....+..||||++|+||.++|+.+|++|++|+|+|||.||+|||++|||||||| +|
T Consensus 695 ~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~g 774 (1053)
T TIGR01523 695 DEIMDSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGING 774 (1053)
T ss_pred cccccceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCc
Confidence 12478999999999999999989999999999999999999999999999999999999999999999999999 89
Q ss_pred cHHHHhhcCeeecCCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----C-CCChhHHHHHHHHHH
Q 001877 714 TAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLG----I-PDTLAPVQLLWVNLV 788 (1001)
Q Consensus 714 ~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~----~-~~~~~~~~~l~~~~~ 788 (1001)
++.++++||+++.++++..++.++++||++|.|+++++.|.+++|+..+++.+++.+++ . +.|++++|++|+|++
T Consensus 775 t~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli 854 (1053)
T TIGR01523 775 SDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMI 854 (1053)
T ss_pred cHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999888874 3 468999999999999
Q ss_pred HhhhhhhhhcccCCCccccccCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccccccccccCCC
Q 001877 789 TDGLPATAIGFNKQDSDVMKAKPRKVSEAVVTGWLFFRYLVIGAYVGVATVAGFIWWYVYSNEGPKLPYSELMNFDSCST 868 (1001)
Q Consensus 789 ~~~~p~~~l~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 868 (1001)
+|++|+++|+++++++++|++|||.++++++++.++..++..|++.++.+++.|++++...... .+. ..|..
T Consensus 855 ~d~~palaL~~e~~~~~~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~------~~~--~~~~~ 926 (1053)
T TIGR01523 855 TSCFPAMGLGLEKAAPDLMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSG------NLG--HDCDA 926 (1053)
T ss_pred HHHHHHHhhccCCCChhHHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc------ccc--ccccc
Confidence 9999999999999999999999999999999998888888899988887776665432211100 000 01111
Q ss_pred CCCCCCCCccCCCcchhhHHHHHHHHHHHHHHHhcccCcccccc---------------CCCcchHHHHHHHHHHHHHHH
Q 001877 869 RETTHPCSIFEDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVI---------------PPWSNLWLVASIILTMFLHIL 933 (1001)
Q Consensus 869 ~~~~~~~~~~~~~~~~ti~f~~lv~~~~~~~~~~~~~~~s~~~~---------------~~~~n~~l~~~i~~~~~l~~~ 933 (1001)
++. .+|. ....++|++|.+++++|+++.++||+.+.++|.. +.|+|++++++++++++++++
T Consensus 927 ~~~-~~~~--~~~~a~t~~f~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~ 1003 (1053)
T TIGR01523 927 HYH-AGCN--DVFKARSAAFATMTFCALILAVEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFP 1003 (1053)
T ss_pred ccc-cccc--chhhhHHHHHHHHHHHHHHHHHHHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHH
Confidence 110 0110 1134689999999999999999999988887764 368999999999999999999
Q ss_pred HHhcccccc-cccccccCchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 001877 934 ILYVPPLSV-LFSVTPLSWADWTAVFYLSFPVIIIDEVLKFFSRKS 978 (1001)
Q Consensus 934 i~~~p~~~~-~f~~~~l~~~~w~~~~~~~~~~l~~~e~~K~~~r~~ 978 (1001)
++|+|+++. +|++.++++ .|+++++++++.++++|++|++.|++
T Consensus 1004 ~~~~p~~~~~~f~~~~l~~-~w~~~~~~~~~~~~~~e~~K~~~r~~ 1048 (1053)
T TIGR01523 1004 TIYIPVINDDVFKHKPIGA-EWGLAAAATIAFFFGAEIWKCGKRRL 1048 (1053)
T ss_pred HHhhhhhhhhhhccCCcch-HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999986 999999996 89999999999999999999887655
No 3
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-139 Score=1158.96 Aligned_cols=886 Identities=31% Similarity=0.444 Sum_probs=762.1
Q ss_pred CHHHHHHHhCCCCCCCCCH--HHHHHHHhhcCCCCCCCCcCccHHHHHHHHhcchHHHHHHHHHHHHHHHHHhcCCCCcc
Q 001877 8 SVVEVLDFFGVDPTKGLTD--SQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLT 85 (1001)
Q Consensus 8 ~~~~~~~~l~~~~~~GLs~--~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~~i~~~~~~~~~~~~~~~ 85 (1001)
.+++++++|+||+..||+. +|.++|++.||+|.++++++++||+++++.|.+...++|.++|++|+.++++... ...
T Consensus 102 Gv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g-~~~ 180 (1034)
T KOG0204|consen 102 GVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPG-IED 180 (1034)
T ss_pred CHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCC-CCc
Confidence 6899999999999999987 8999999999999999999999999999999999999999999999999887532 235
Q ss_pred cchhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEECCeEEEeeCCCCCCCcEEEecCCCccCCcEEEee
Q 001877 86 AFLEPSVILLILAANAAVGVITETNAEKALEELRAYQ-ADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIE 164 (1001)
Q Consensus 86 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~ 164 (1001)
.|++++.|++.+++..++....+++.++++++|++.. ..+..|+|||+.++|+..||+||||+.|+.||.+||||++++
T Consensus 181 GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~ 260 (1034)
T KOG0204|consen 181 GWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQ 260 (1034)
T ss_pred ccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEe
Confidence 7999999999888888888889999999999997544 447899999999999999999999999999999999999997
Q ss_pred ecCCceEEecccccCCCcccccchhhhcccccccCCCCceEEecceeecceEEEEEEEecccccchhHHHHhccCCCCCC
Q 001877 165 MLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVT 244 (1001)
Q Consensus 165 ~~~g~~~Vdes~LtGEs~pv~k~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~ 244 (1001)
++++.+|||++||||.++.|.+. .++++++||++.+|.++++|+.+|.+|..|+++..+.....++|
T Consensus 261 --gn~L~iDESSlTGESd~v~k~~~-----------~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~t 327 (1034)
T KOG0204|consen 261 --GNSLKIDESSLTGESDHVQKSLD-----------KDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEET 327 (1034)
T ss_pred --ccceeEecccccCCCcceeccCC-----------CCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCC
Confidence 67999999999999999999862 46799999999999999999999999999999999999888999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-----C------CCccchHHHHHHHHHHHHHHHHhcCCchHHHHHH
Q 001877 245 PLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRD-----P------SHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTT 313 (1001)
Q Consensus 245 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~------~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~ 313 (1001)
|||-++++++..+..+.+.++.+.+++...++.. . +.......++.+|..++.++++++|++||+++++
T Consensus 328 pLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTL 407 (1034)
T KOG0204|consen 328 PLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTL 407 (1034)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHH
Confidence 9999999999999988877777766655443311 1 1111245667778888888999999999999999
Q ss_pred HHHHhhHhhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEeccccCCCceeeeeecCcccCCCCccccC
Q 001877 314 CLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDS 393 (1001)
Q Consensus 314 ~~~~~~~~l~~~~i~~k~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (1001)
++++++++|.+++.++|.++++|++|+.++||+|||||||+|+|+|.+.|+.+..++.. . ++.
T Consensus 408 sLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~--------~----~~~----- 470 (1034)
T KOG0204|consen 408 SLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVN--------S----PKS----- 470 (1034)
T ss_pred HHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeecccccccc--------C----ccc-----
Confidence 99999999999999999999999999999999999999999999999999876543310 0 000
Q ss_pred CCccccCCCChHHH-HHHHHHhcccccccccccCCC-CcceeccCchHHHHHHHHHHcCCCCCCCcchhhhhhhhccccc
Q 001877 394 SGIQLEFPAQLPCL-LHIARCSALCNESVLQYNPDK-GNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERAS 471 (1001)
Q Consensus 394 ~~~~~~~~~~~~~~-~~~~~~~~lc~~~~~~~~~~~-~~~~~~~~~~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~ 471 (1001)
....+.+ ..+....++..+.....+... ......|+|+|.||+.++...|.++.
T Consensus 471 -------~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~----------------- 526 (1034)
T KOG0204|consen 471 -------SNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQ----------------- 526 (1034)
T ss_pred -------ccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchH-----------------
Confidence 0012223 334444444444333332222 36778899999999999998887552
Q ss_pred ccCccccccccEEEEecCCCCCceEEEEEeeCCeE-EEEEeCChhHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHH
Q 001877 472 YCNHHWEIEFKKVSILEFSRDRKMMSVLCSHKQMC-VMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSL 550 (1001)
Q Consensus 472 ~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~~~~-~l~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (1001)
..+.+.++++.+||+|.||+|+++++.+++. ++|+|||+|.|++.|+.+.+. +|...+++++.+..+++.++.+
T Consensus 527 ----~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~-~g~~~~~~e~~~~~~~~~Ie~m 601 (1034)
T KOG0204|consen 527 ----DVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDS-NGELVPFNEDDRKSFKDVIEPM 601 (1034)
T ss_pred ----hhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECC-CCCEeeCCHHHHHHHHHHHHHH
Confidence 2245678899999999999999999976443 599999999999999999877 8899999999999999999999
Q ss_pred hhhhhhHHHHHHhccCCcc----cccCcc-ccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHH
Q 001877 551 AGKEALRCLALALKQMPIN----RQTLSY-DDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESI 625 (1001)
Q Consensus 551 ~~~~g~r~l~~a~k~l~~~----~~~~~~-~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~i 625 (1001)
|+ +|+||+|+|||+.... .+.... ..+.|++++|++|++||+||+++++|+.||+|||.|.|+||||..||++|
T Consensus 602 A~-~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAI 680 (1034)
T KOG0204|consen 602 AS-EGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAI 680 (1034)
T ss_pred HH-hhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHH
Confidence 99 9999999999995543 111222 26889999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCC
Q 001877 626 CHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKAD 705 (1001)
Q Consensus 626 a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~ 705 (1001)
|.+|||..+..+ -.++.|.+++++++++++++.++..|+||.+|.+|.-+|+.++++|++|+++|||.||+|||++||
T Consensus 681 A~eCGILt~~~d--~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeAD 758 (1034)
T KOG0204|consen 681 ARECGILTPGGD--FLALEGKEFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEAD 758 (1034)
T ss_pred HHHcccccCCCc--cceecchhhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcc
Confidence 999999988754 578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEec-CccHHHHhhcCeeecCCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHH
Q 001877 706 IGIAMG-SGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQLLW 784 (1001)
Q Consensus 706 vgIam~-~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~~~~~~~l~ 784 (1001)
||.||| .|+++||++||+|++||+|.+|+.++++||+.|.||+|+++|++.-|++.++..|++++....+|+++.|+||
T Consensus 759 VGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLW 838 (1034)
T KOG0204|consen 759 VGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLW 838 (1034)
T ss_pred cchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHH
Confidence 999999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhhcccCCCccccccCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccccccccc
Q 001877 785 VNLVTDGLPATAIGFNKQDSDVMKAKPRKVSEAVVTGWLFFRYLVIGAYVGVATVAGFIWWYVYSNEGPKLPYSELMNFD 864 (1001)
Q Consensus 785 ~~~~~~~~p~~~l~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 864 (1001)
+|++||.+.+++||.+||.+++|+|+|+.++++++++.|+-.++.+++|+-++++...++.-.... ....+.+
T Consensus 839 VNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~~if~-----~~~~~~~-- 911 (1034)
T KOG0204|consen 839 VNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGKSIFG-----LNGPLHS-- 911 (1034)
T ss_pred HHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcchhhhc-----cCCCCCC--
Confidence 999999999999999999999999999999999999988666667788876655443322211110 0000000
Q ss_pred cCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHHHHhcccCccccccCCCcchHHHHHHHHHHHHHHHHHhcccccccc
Q 001877 865 SCSTRETTHPCSIFEDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVASIILTMFLHILILYVPPLSVLF 944 (1001)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~ti~f~~lv~~~~~~~~~~~~~~~s~~~~~~~~n~~l~~~i~~~~~l~~~i~~~p~~~~~f 944 (1001)
-.....|++|.+||++|+||.+|.|...+.-.+.+.++|++|+..+...+++|++++ .+.+.+|
T Consensus 912 --------------~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~~F~~ii~~T~v~QviIv--eF~g~~~ 975 (1034)
T KOG0204|consen 912 --------------PPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNRLFCVIITITVVSQVIIV--EFGGAFF 975 (1034)
T ss_pred --------------chhhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCceEEEEeeeeeehhhhhh--hhcCcce
Confidence 012235899999999999999999998765555688999999988888888888664 6678889
Q ss_pred cccccCchhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 001877 945 SVTPLSWADWTAVFYLSFPVIIIDEVLKFFSRKSS 979 (1001)
Q Consensus 945 ~~~~l~~~~w~~~~~~~~~~l~~~e~~K~~~r~~~ 979 (1001)
+++++++.+|++|++++++.|++..+.|.+.-...
T Consensus 976 st~~L~~~qWl~ci~~g~~sl~~g~~ik~iP~~~~ 1010 (1034)
T KOG0204|consen 976 STTPLSLTQWLWCIFIGVLSLPWGQLLKCIPVSSL 1010 (1034)
T ss_pred eeecccHHHHHHHHHHHHHHHHHHHHheecccccc
Confidence 99999999999999999999999999997755444
No 4
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-133 Score=1225.42 Aligned_cols=880 Identities=40% Similarity=0.623 Sum_probs=761.5
Q ss_pred ccccCCHH--HHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHhcchHHHHHHHHHHHHHHHHHhcC
Q 001877 3 DAYARSVV--EVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALING 80 (1001)
Q Consensus 3 ~~~~~~~~--~~~~~l~~~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~~i~~~~~~~~~~ 80 (1001)
.||..+.+ ++...+.+++..||+++|+.+|++.||.|+++..+..++|+.++.||++++..+++.+++++++.+.+..
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~ 101 (917)
T COG0474 22 TWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVD 101 (917)
T ss_pred cccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 57888888 9999999999999999999999999999999999989999999999999999999999999998754421
Q ss_pred CCCcccchhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEECCeEEEeeCCCCCCCcEEEecCCCccCCcE
Q 001877 81 ETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADM 160 (1001)
Q Consensus 81 ~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~ 160 (1001)
.. .+...++.++++|..++++||+|+++++++++++.+.+++|+|||++++|+++||||||||+|++||+||||+
T Consensus 102 ~~-----~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~ 176 (917)
T COG0474 102 AG-----VDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADL 176 (917)
T ss_pred cC-----cceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccce
Confidence 10 3455677888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeecCCceEEecccccCCCcccccchhhhcccccccC-CCCceEEecceeecceEEEEEEEecccccchhHHHHhccC
Q 001877 161 RMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQ-DKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQT 239 (1001)
Q Consensus 161 ~ll~~~~g~~~Vdes~LtGEs~pv~k~~~~~~~~~~~~~-~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~ 239 (1001)
+|+++ .+++||||+|||||.|+.|.+.+....+.+.. ++.|++|+||.+.+|++.|+|++||.+|..|++.+.+...
T Consensus 177 rLl~~--~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~ 254 (917)
T COG0474 177 RLLES--SDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTK 254 (917)
T ss_pred EEEEe--cCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccc
Confidence 99984 33799999999999999999876665555565 8899999999999999999999999999999999999888
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhh
Q 001877 240 EDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGT 319 (1001)
Q Consensus 240 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~~ 319 (1001)
....+|++++++++..++..+.++++++++++....... .+...+..+++++++++|++||+.++++++.++
T Consensus 255 ~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~--------~~~~~~~~~v~l~va~IPegLp~~vti~la~g~ 326 (917)
T COG0474 255 KEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGN--------GLLESFLTALALAVAAVPEGLPAVVTIALALGA 326 (917)
T ss_pred cccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc--------cHHHHHHHHHHHHHhccccchHHHHHHHHHHHH
Confidence 778899999999999999999999988888887443221 145668889999999999999999999999999
Q ss_pred HhhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEeccccCCCceeeeeecCcccCCCCccccCCCcccc
Q 001877 320 KRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLE 399 (1001)
Q Consensus 320 ~~l~~~~i~~k~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (1001)
++|+++++++|+++++|+||++|+||+|||||||+|+|+|++++..++.. ..++ .
T Consensus 327 ~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~-------------~~~~------------~ 381 (917)
T COG0474 327 QRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGK-------------DIDD------------K 381 (917)
T ss_pred HHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcc-------------cccc------------c
Confidence 99999999999999999999999999999999999999999999874100 0000 0
Q ss_pred CCCChHHHHHHHHHhcccccccccccCCCCcceeccCchHHHHHHHHHHcCCCCCCCcchhhhhhhhcccccccCccccc
Q 001877 400 FPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEI 479 (1001)
Q Consensus 400 ~~~~~~~~~~~~~~~~lc~~~~~~~~~~~~~~~~~~~~~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (1001)
.....+.+.+++..+++||+.....+ + ++..|||+|.||+++++..|... .. ..++.
T Consensus 382 ~~~~~~~~~~~l~~~~lc~~~~~~~~-~---~~~~gdptE~Al~~~a~~~~~~~-~~------------------~~~~~ 438 (917)
T COG0474 382 DLKDSPALLRFLLAAALCNSVTPEKN-G---WYQAGDPTEGALVEFAEKLGFSL-DL------------------SGLEV 438 (917)
T ss_pred ccccchHHHHHHHHHHhcCccccccc-C---ceecCCccHHHHHHHHHhcCCcC-CH------------------HHHhh
Confidence 00123445577888999998876543 2 67789999999999999988632 00 12345
Q ss_pred cccEEEEecCCCCCceEEEEEee-CCeEEEEEeCChhHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhhhhhHH
Q 001877 480 EFKKVSILEFSRDRKMMSVLCSH-KQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRC 558 (1001)
Q Consensus 480 ~~~~l~~~~F~s~~k~msviv~~-~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~ 558 (1001)
.+++++++||+|+||||||++++ ++++++++|||||.|+++|++. +...+++++.++.+.+..+++++ +|+|+
T Consensus 439 ~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~-----~~~~~~~~~~~~~~~~~~~~la~-~glRv 512 (917)
T COG0474 439 EYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSI-----GELEPLTEEGLRTLEEAVKELAS-EGLRV 512 (917)
T ss_pred hcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhccc-----CcccccCHHHHHHHHHHHHHHHH-HHHHH
Confidence 67899999999999999999984 4568999999999999999875 45567889999999999999999 99999
Q ss_pred HHHHhccCCcccccCc-cccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccc
Q 001877 559 LALALKQMPINRQTLS-YDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVD 637 (1001)
Q Consensus 559 l~~a~k~l~~~~~~~~-~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~ 637 (1001)
+++|||..+..+.... .+.|+|++|+|+++++||+|++++++|+.|++|||++||+|||+..||++||++||+......
T Consensus 513 la~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~ 592 (917)
T COG0474 513 LAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAES 592 (917)
T ss_pred HHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCc
Confidence 9999998876554333 348999999999999999999999999999999999999999999999999999998775422
Q ss_pred cccccccchhhccCChHHHHHhhccceEEEEeChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEEec-CccHH
Q 001877 638 FVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG-SGTAV 716 (1001)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIam~-~~~~~ 716 (1001)
+.+++|.+++.+.++++.+.+.+..||||++|+||.++|+.+|+.|++|+|+|||+||+||||+|||||||| +|+++
T Consensus 593 --~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtda 670 (917)
T COG0474 593 --ALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDA 670 (917)
T ss_pred --eeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHH
Confidence 458999999999999999999999999999999999999999999999999999999999999999999998 79999
Q ss_pred HHhhcCeeecCCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CChhHHHHHHHHHHHhhhhhh
Q 001877 717 AKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIP-DTLAPVQLLWVNLVTDGLPAT 795 (1001)
Q Consensus 717 ~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~p~~ 795 (1001)
+|++||+++.++++..+..+++|||++|.|+++++.|.+++|+..+++++++.+++.+ .|++++|++|+|+++|++|++
T Consensus 671 ak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p~~~~qll~inll~d~~pa~ 750 (917)
T COG0474 671 AKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPAL 750 (917)
T ss_pred HHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhhhhh
Confidence 9999999999999999999999999999999999999999999999999999888887 899999999999999999999
Q ss_pred hhcccCCCccccccCCCCCCCCccchHHHHHHHHHHHHH-HHHHHHHHHHHHHhhCCCCCCccccccccccCCCCCCCCC
Q 001877 796 AIGFNKQDSDVMKAKPRKVSEAVVTGWLFFRYLVIGAYV-GVATVAGFIWWYVYSNEGPKLPYSELMNFDSCSTRETTHP 874 (1001)
Q Consensus 796 ~l~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 874 (1001)
+++.++++++.|++||+++.+++++++.++++++...++ ++..++.|.+++...... ...+ .
T Consensus 751 ~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~----~~~~-------------~ 813 (917)
T COG0474 751 ALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIAN----TLGL-------------D 813 (917)
T ss_pred eeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc----ccch-------------h
Confidence 999999999999999999999999999999966654444 444444443333221100 0000 0
Q ss_pred CCccCCCcchhhHHHHHHHHHHHHHHHhcccCccccccCCCcchHHHHHHHHHHHHHHHHHhccccc-ccccccccCchh
Q 001877 875 CSIFEDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVASIILTMFLHILILYVPPLS-VLFSVTPLSWAD 953 (1001)
Q Consensus 875 ~~~~~~~~~~ti~f~~lv~~~~~~~~~~~~~~~s~~~~~~~~n~~l~~~i~~~~~l~~~i~~~p~~~-~~f~~~~l~~~~ 953 (1001)
. .....+|+.|..+++.|.++.+.+|+.+.+++...++.|+.+++++++.++++++..|.|+.. ..|...++++..
T Consensus 814 ~---~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~~~~~~~~~ 890 (917)
T COG0474 814 L---FQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPLSLFE 890 (917)
T ss_pred h---HHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHhhhccCCCCcHHH
Confidence 0 012347899999999999999999998888888888899999999999999999999999888 789999999888
Q ss_pred HHHHHHHHH--HHHHHHHHHHH
Q 001877 954 WTAVFYLSF--PVIIIDEVLKF 973 (1001)
Q Consensus 954 w~~~~~~~~--~~l~~~e~~K~ 973 (1001)
|+.++++.. ..+...+.+|.
T Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~ 912 (917)
T COG0474 891 WLIAIAVALLLLYIVVSELYKL 912 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 998877763 33444444443
No 5
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=1e-132 Score=1238.19 Aligned_cols=923 Identities=30% Similarity=0.434 Sum_probs=764.8
Q ss_pred ccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHhcchHHHHHHHHHHHHHHHHHhcCC-
Q 001877 3 DAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGE- 81 (1001)
Q Consensus 3 ~~~~~~~~~~~~~l~~~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~~i~~~~~~~~~~~- 81 (1001)
.||.++++++.+.|+++..+|||++||++|+++||+|+++.++++++|+.++++|++|++++++++++++++.+.+...
T Consensus 16 ~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~ 95 (997)
T TIGR01106 16 DDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQAST 95 (997)
T ss_pred CchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhcc
Confidence 4899999999999999999999999999999999999999988899999999999999999999999998876544211
Q ss_pred ---CCcccchhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEECCeEEEeeCCCCCCCcEEEecCCCccCC
Q 001877 82 ---TGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPA 158 (1001)
Q Consensus 82 ---~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPa 158 (1001)
.....|+++++++++++++.++++++++|+++.+++++++.+.+++|+|||++++|+++||||||+|.|++||+|||
T Consensus 96 ~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPa 175 (997)
T TIGR01106 96 EEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPA 175 (997)
T ss_pred CCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEee
Confidence 12246888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEeeecCCceEEecccccCCCcccccchhhhcccccccCCCCceEEecceeecceEEEEEEEecccccchhHHHHhcc
Q 001877 159 DMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQ 238 (1001)
Q Consensus 159 D~~ll~~~~g~~~Vdes~LtGEs~pv~k~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~ 238 (1001)
||++++ ++.+.||||+|||||.|+.|.++.. ...+.+.+|++|+||.+.+|.+.++|++||.+|.+|++.+.+.+
T Consensus 176 D~~il~--~~~l~VdeS~LTGES~pv~K~~~~~---~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~ 250 (997)
T TIGR01106 176 DLRIIS--AQGCKVDNSSLTGESEPQTRSPEFT---HENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASG 250 (997)
T ss_pred eEEEEE--ccCcEEEccccCCCCCceeccCCCc---ccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhh
Confidence 999997 4468999999999999999987532 22334678999999999999999999999999999999998888
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHh
Q 001877 239 TEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALG 318 (1001)
Q Consensus 239 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~ 318 (1001)
.+.+++|+++.++++...+..+++++++++++++..... .+...+.+++++++++||++||++++++++.+
T Consensus 251 ~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~ 321 (997)
T TIGR01106 251 LENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGY---------TWLEAVIFLIGIIVANVPEGLLATVTVCLTLT 321 (997)
T ss_pred cccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---------CHHHHHHHHHHHHhhcCCccchHHHHHHHHHH
Confidence 888889999999999999888877777766665533221 12345566788899999999999999999999
Q ss_pred hHhhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEeccccCCCceeeeeecCcccCCCCccccCCCccc
Q 001877 319 TKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQL 398 (1001)
Q Consensus 319 ~~~l~~~~i~~k~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (1001)
+++|+++|+++|+++++|+||++++||+|||||||+|+|+|.+++..+..+. ..+. +.+.+...
T Consensus 322 ~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~--------~~~~-~~~~~~~~------- 385 (997)
T TIGR01106 322 AKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHE--------ADTT-EDQSGVSF------- 385 (997)
T ss_pred HHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEe--------cCCc-cCCCCccC-------
Confidence 9999999999999999999999999999999999999999999987543221 1100 00111000
Q ss_pred cCCCChHHHHHHHHHhcccccccccccCCC---CcceeccCchHHHHHHHHHHcCCCCCCCcchhhhhhhhcccccccCc
Q 001877 399 EFPAQLPCLLHIARCSALCNESVLQYNPDK---GNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNH 475 (1001)
Q Consensus 399 ~~~~~~~~~~~~~~~~~lc~~~~~~~~~~~---~~~~~~~~~~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (1001)
.........+..++++||++.+..+..+ ...+..|+|+|.||++++...+... .
T Consensus 386 --~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~---------------------~ 442 (997)
T TIGR01106 386 --DKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSV---------------------M 442 (997)
T ss_pred --CcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCH---------------------H
Confidence 1122344567778899998765322111 1234569999999999997643211 0
Q ss_pred cccccccEEEEecCCCCCceEEEEEeeC----CeEEEEEeCChhHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHh
Q 001877 476 HWEIEFKKVSILEFSRDRKMMSVLCSHK----QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLA 551 (1001)
Q Consensus 476 ~~~~~~~~l~~~~F~s~~k~msviv~~~----~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (1001)
..+..|+++..+||+|+||||+++++.+ +++++|+|||||.|+++|+++.. +|...+++++.++.+.+.+++++
T Consensus 443 ~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~--~g~~~~l~~~~~~~~~~~~~~~a 520 (997)
T TIGR01106 443 EMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILI--HGKEQPLDEELKEAFQNAYLELG 520 (997)
T ss_pred HHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhc--CCCcccCCHHHHHHHHHHHHHHH
Confidence 1234678899999999999999988642 46789999999999999998763 57778899999999999999999
Q ss_pred hhhhhHHHHHHhccCCcccccC----c---cc-cCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHH
Q 001877 552 GKEALRCLALALKQMPINRQTL----S---YD-DEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAE 623 (1001)
Q Consensus 552 ~~~g~r~l~~a~k~l~~~~~~~----~---~~-~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~ 623 (1001)
+ +|+||+++|||.++.++... . .+ .|+|++|+|+++++||+|++++++|++|+++||+++|+|||++.+|.
T Consensus 521 ~-~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~ 599 (997)
T TIGR01106 521 G-LGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAK 599 (997)
T ss_pred h-cCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHH
Confidence 8 99999999999986532211 1 11 38999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCcccc--------------------cccccccchhhccCChHHHHHhhccc--eEEEEeChhhHHHHHHHH
Q 001877 624 SICHKIGAFDHLVD--------------------FVGRSYTASEFEELPAMQQTVALQHM--ALFTRVEPSHKRMLVEAL 681 (1001)
Q Consensus 624 ~ia~~~gi~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~r~~p~~K~~~v~~l 681 (1001)
++|+++|+...... ....+++|.+++.+.++++.+.+.+. .||||++|+||.++|+.+
T Consensus 600 ~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~l 679 (997)
T TIGR01106 600 AIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGC 679 (997)
T ss_pred HHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHH
Confidence 99999999754221 01268999999999999988888765 499999999999999999
Q ss_pred hccCCEEEEEeCCccCHHHHhcCCceEEec-CccHHHHhhcCeeecCCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 001877 682 QNQNEVVAMTGDGVNDAPALKKADIGIAMG-SGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIG 760 (1001)
Q Consensus 682 ~~~~~~v~~iGDg~ND~~~l~~A~vgIam~-~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~ 760 (1001)
|+.|++|+|+|||.||+|||++|||||||| +|++.++++||+++.+|++.+++.++++||++|.|+++++.|.+++|+.
T Consensus 680 q~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~ 759 (997)
T TIGR01106 680 QRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIP 759 (997)
T ss_pred HHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 999999999999999999999999999999 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCChhHHHHHHHHHHHhhhhhhhhcccCCCccccccCCCCC-CCCccchHHHHHHH-HHHHHHHHHH
Q 001877 761 EVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMKAKPRKV-SEAVVTGWLFFRYL-VIGAYVGVAT 838 (1001)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~P~~~-~~~~~~~~~~~~~~-~~~~~~~~~~ 838 (1001)
.+++.+++.+++.|+|++++|++|+|+++|++|+++++++++++++|++||+.+ .+++++++++..++ ..|+++++..
T Consensus 760 ~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P~~~~~~~l~~~~~~~~~~~~~g~~~~~~~ 839 (997)
T TIGR01106 760 EITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGG 839 (997)
T ss_pred HHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCcCCccccccCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999985 67888887765544 4577877766
Q ss_pred HHHHHHHHHhhCCCCCCcccccc-ccccCCCCCCC----CCCCcc-C-----CCcchhhHHHHHHHHHHHHHHHhcccCc
Q 001877 839 VAGFIWWYVYSNEGPKLPYSELM-NFDSCSTRETT----HPCSIF-E-----DRHPSTVSMTVLVVVEMFNALNNLSENQ 907 (1001)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~----~~~~~~-~-----~~~~~ti~f~~lv~~~~~~~~~~~~~~~ 907 (1001)
++.+++.+... +........+. .|..+ |..+ ..+..+ . ...++|+.|.+++++|++|.++||+.+.
T Consensus 840 ~~~~~~~~~~~-g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~~~ 916 (997)
T TIGR01106 840 FFTYFVILAEN-GFLPLHLVGLRVQWDDR--WINDLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKTRRN 916 (997)
T ss_pred HHHHHHHHhhc-CCccccccccccccccc--cccccccccccccchhcccchhhhhhHHHHHHHHHHHHHHHHHhccCcc
Confidence 66554433211 10000000000 00000 0000 000000 0 0145899999999999999999999878
Q ss_pred cccccCCCcchHHHHHHHHHHHHHHHHHhcccccccccccccCchhHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhh
Q 001877 908 SLLVIPPWSNLWLVASIILTMFLHILILYVPPLSVLFSVTPLSWADWTAVFYLSFPVIIIDEVLKFFSRKSSGMRFKFWF 987 (1001)
Q Consensus 908 s~~~~~~~~n~~l~~~i~~~~~l~~~i~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~l~~~e~~K~~~r~~~~~~~~~~~ 987 (1001)
++|+.+ ++|+++++++++++++++++.|+|+++.+|++.++++.+|+++++++++.++++|++|++.|++. +.|+
T Consensus 917 ~~f~~~-~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~r~~~----~~~~ 991 (997)
T TIGR01106 917 SVFQQG-MKNKILIFGLFEETALAAFLSYCPGMGVALRMYPLKPTWWFCAFPYSLLIFVYDEIRKLIIRRNP----GGWV 991 (997)
T ss_pred cccccC-CcCHHHHHHHHHHHHHHHHHHHhhhhHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----cchh
Confidence 888766 89999999999999999999999999999999999999999999999999999999999887543 3466
Q ss_pred hc
Q 001877 988 RR 989 (1001)
Q Consensus 988 ~~ 989 (1001)
.|
T Consensus 992 ~~ 993 (997)
T TIGR01106 992 EK 993 (997)
T ss_pred hH
Confidence 54
No 6
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=1.1e-132 Score=1228.43 Aligned_cols=876 Identities=36% Similarity=0.563 Sum_probs=757.8
Q ss_pred cccccCCHHHHHHHhCCCCCCCCC-HHHHHHHHhhcCCCCCCCCcCccHHHHHHHHh-cchHHHHHHHHHHHHHHHHHhc
Q 001877 2 EDAYARSVVEVLDFFGVDPTKGLT-DSQVARHVRIYGKNVLPQEKRTAFWKLVLKQF-DDLLVKILIAAAVISFFLALIN 79 (1001)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~GLs-~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f-~~~~~~~ll~~~i~~~~~~~~~ 79 (1001)
|+||.+|++++++.|++|+.+||| ++|+++|+++||+|+++.++++++|+.+++|| ++|++++++++++++++.
T Consensus 2 ~~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~---- 77 (884)
T TIGR01522 2 KQYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFM---- 77 (884)
T ss_pred cchhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHH----
Confidence 689999999999999999999999 99999999999999999988889999999999 999999999999999876
Q ss_pred CCCCcccchhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEECCeEEEeeCCCCCCCcEEEecCCCccCCc
Q 001877 80 GETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPAD 159 (1001)
Q Consensus 80 ~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD 159 (1001)
+.|.++++++++++++..+++++|+|+++.+++|+++.+.+++|+|||++++|+++||||||+|.|++||+||||
T Consensus 78 -----g~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaD 152 (884)
T TIGR01522 78 -----GNIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPAD 152 (884)
T ss_pred -----cchhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeee
Confidence 357788888888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeecCCceEEecccccCCCcccccchhhhccc-ccccCCCCceEEecceeecceEEEEEEEecccccchhHHHHhcc
Q 001877 160 MRMIEMLSNQLRVDQAILTGESCSVEKELDSIIAT-NAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQ 238 (1001)
Q Consensus 160 ~~ll~~~~g~~~Vdes~LtGEs~pv~k~~~~~~~~-~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~ 238 (1001)
|++++ +.++.||||+|||||.|+.|.+++.... .....+++|++|+||.+.+|++.++|++||.+|.+|++.+.+.+
T Consensus 153 g~ii~--g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~ 230 (884)
T TIGR01522 153 LRIVE--AVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQA 230 (884)
T ss_pred EEEEE--cCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhcc
Confidence 99996 4469999999999999999987643221 23445678999999999999999999999999999999999998
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHh
Q 001877 239 TEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALG 318 (1001)
Q Consensus 239 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~ 318 (1001)
.+.+++|+++.+++++.++.++.++++++++++..... ..+...+..++++++++|||+||++++++++.+
T Consensus 231 ~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~ 301 (884)
T TIGR01522 231 IEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWFQG---------KDWLEMFTISVSLAVAAIPEGLPIIVTVTLALG 301 (884)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---------CCHHHHHHHHHHHHHHHccchHHHHHHHHHHHH
Confidence 88889999999999999888766555554444432211 123445677889999999999999999999999
Q ss_pred hHhhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEeccccCCCceeeeeecCcccCCCCccccCCCccc
Q 001877 319 TKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQL 398 (1001)
Q Consensus 319 ~~~l~~~~i~~k~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (1001)
.+||+++|+++|+++++|+||++|+||||||||||+|+|+|.+++..++.... .++..+.+.+....+.....
T Consensus 302 ~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 374 (884)
T TIGR01522 302 VLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTM-------LNAVSLNQFGEVIVDGDVLH 374 (884)
T ss_pred HHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEee-------ccCCccCCCCcccccccccc
Confidence 99999999999999999999999999999999999999999999875432110 01111111111110000000
Q ss_pred cCCCChHHHHHHHHHhcccccccccccCCCCcceeccCchHHHHHHHHHHcCCCCCCCcchhhhhhhhcccccccCcccc
Q 001877 399 EFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWE 478 (1001)
Q Consensus 399 ~~~~~~~~~~~~~~~~~lc~~~~~~~~~~~~~~~~~~~~~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (1001)
....+.+.+++.++++||++....+ + ....|||+|.|++++++..|++. .+
T Consensus 375 --~~~~~~~~~~l~~~~l~~~~~~~~~--~--~~~~g~p~e~All~~~~~~~~~~-----------------------~~ 425 (884)
T TIGR01522 375 --GFYTVAVSRILEAGNLCNNAKFRNE--A--DTLLGNPTDVALIELLMKFGLDD-----------------------LR 425 (884)
T ss_pred --cccCHHHHHHHHHHhhhCCCeecCC--C--CCcCCChHHHHHHHHHHHcCcHh-----------------------HH
Confidence 0123345667778889998754321 1 12358999999999998776421 12
Q ss_pred ccccEEEEecCCCCCceEEEEEee--CCeEEEEEeCChhHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhhhhh
Q 001877 479 IEFKKVSILEFSRDRKMMSVLCSH--KQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEAL 556 (1001)
Q Consensus 479 ~~~~~l~~~~F~s~~k~msviv~~--~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 556 (1001)
..++.++++||+|+||||++++++ ++++++++|||||.|+++|+++... +|...+++++.++++.+..++++. +|+
T Consensus 426 ~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~-~g~~~~l~~~~~~~i~~~~~~~a~-~G~ 503 (884)
T TIGR01522 426 ETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKK-DGKTLTLTQQQRDVIQEEAAEMAS-AGL 503 (884)
T ss_pred hhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhc-CCCeeeCCHHHHHHHHHHHHHHHh-cCC
Confidence 357788999999999999999887 5678999999999999999987654 566677888888899999999998 999
Q ss_pred HHHHHHhccCCcccccCccccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCccc
Q 001877 557 RCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLV 636 (1001)
Q Consensus 557 r~l~~a~k~l~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~ 636 (1001)
|++++||+.+ +.|++|+|+++++|++||+++++|+.|+++|++++|+|||+..+|.++|+++|+....
T Consensus 504 rvl~~A~~~~-----------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~- 571 (884)
T TIGR01522 504 RVIAFASGPE-----------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKT- 571 (884)
T ss_pred EEEEEEEEcC-----------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC-
Confidence 9999999875 4689999999999999999999999999999999999999999999999999997653
Q ss_pred ccccccccchhhccCChHHHHHhhccceEEEEeChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEEec-CccH
Q 001877 637 DFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG-SGTA 715 (1001)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIam~-~~~~ 715 (1001)
..+++|++++.+.++++...+.+..||||++|+||.++|+.+|+.|++|+|+|||.||+||+++|||||||| ++++
T Consensus 572 ---~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~ 648 (884)
T TIGR01522 572 ---SQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTD 648 (884)
T ss_pred ---CceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCH
Confidence 356899999999999999999999999999999999999999999999999999999999999999999999 7999
Q ss_pred HHHhhcCeeecCCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHhhhhhh
Q 001877 716 VAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPAT 795 (1001)
Q Consensus 716 ~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~ 795 (1001)
.++++||+++.++++..++.++++||+++.|+++++.|.++.|+..+++.+++.+++.+.|++++|++|+|+++|++|++
T Consensus 649 va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~ 728 (884)
T TIGR01522 649 VAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQ 728 (884)
T ss_pred HHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHH
Confidence 99999999999999999999999999999999999999999999999888888899999999999999999999999999
Q ss_pred hhcccCCCccccccCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccccccccccCCCCCCCCCC
Q 001877 796 AIGFNKQDSDVMKAKPRKVSEAVVTGWLFFRYLVIGAYVGVATVAGFIWWYVYSNEGPKLPYSELMNFDSCSTRETTHPC 875 (1001)
Q Consensus 796 ~l~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 875 (1001)
++++++|++++|++||++++++++++.++..++..|+++.+..++.|.+. .. .+ .
T Consensus 729 ~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~-~~-------~---------------- 783 (884)
T TIGR01522 729 SLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVRE-MQ-DG-------V---------------- 783 (884)
T ss_pred HhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHH-Hc-CC-------c----------------
Confidence 99999999999999999999999999988888888888765544333221 11 00 0
Q ss_pred CccCCCcchhhHHHHHHHHHHHHHHHhcccCccccccCCCcchHHHHHHHHHHHHHHHHHhcccccccccccccCchhHH
Q 001877 876 SIFEDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVASIILTMFLHILILYVPPLSVLFSVTPLSWADWT 955 (1001)
Q Consensus 876 ~~~~~~~~~ti~f~~lv~~~~~~~~~~~~~~~s~~~~~~~~n~~l~~~i~~~~~l~~~i~~~p~~~~~f~~~~l~~~~w~ 955 (1001)
....++|++|.+++++|+||.+++|+++.++|..++++|++++++++++++++++++|+|+++.+|++.|+++.+|+
T Consensus 784 ---~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~f~~~~l~~~~w~ 860 (884)
T TIGR01522 784 ---ITARDTTMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQLLVIYFPPLQSVFQTEALSIKDLL 860 (884)
T ss_pred ---chhhHHHHHHHHHHHHHHHHHHHHccCCccccccCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHH
Confidence 01234799999999999999999999888888878899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Q 001877 956 AVFYLSFPVIIIDEVLKFFSRKS 978 (1001)
Q Consensus 956 ~~~~~~~~~l~~~e~~K~~~r~~ 978 (1001)
+++++++..++++|++|+++|.+
T Consensus 861 ~~~~~~~~~~~~~~~~k~~~~~~ 883 (884)
T TIGR01522 861 FLLLITSSVCIVDEIRKKVERSR 883 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999987654
No 7
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=7.9e-130 Score=1210.22 Aligned_cols=881 Identities=31% Similarity=0.439 Sum_probs=737.4
Q ss_pred CHHHHHHHhCCCCCCCCC--HHHHHHHHhhcCCCCCCCCcCccHHHHHHHHhcchHHHHHHHHHHHHHHHHHhc----CC
Q 001877 8 SVVEVLDFFGVDPTKGLT--DSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALIN----GE 81 (1001)
Q Consensus 8 ~~~~~~~~l~~~~~~GLs--~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~~i~~~~~~~~~----~~ 81 (1001)
+++++++.|+++.++||| ++||++|+++||+|+++.++++++|+.+++||+++++++|+++++++++.+... ..
T Consensus 43 ~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~ 122 (941)
T TIGR01517 43 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 122 (941)
T ss_pred CHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccC
Confidence 789999999999999999 999999999999999999998999999999999999999999999999887542 12
Q ss_pred CCcccchhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEECCeEEEeeCCCCCCCcEEEecCCCccCCcE
Q 001877 82 TGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAY-QADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADM 160 (1001)
Q Consensus 82 ~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~v~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~ 160 (1001)
.+...|+++++++++++++..++.+++++++++++++++. .+.+++|+|||++++|+++||+|||+|.|++||+|||||
T Consensus 123 ~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~ 202 (941)
T TIGR01517 123 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADG 202 (941)
T ss_pred ccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccE
Confidence 2334788999999999999999999999999999999864 467899999999999999999999999999999999999
Q ss_pred EEeeecCCceEEecccccCCCcccccchhhhcccccccCCCCceEEecceeecceEEEEEEEecccccchhHHHHhccCC
Q 001877 161 RMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTE 240 (1001)
Q Consensus 161 ~ll~~~~g~~~Vdes~LtGEs~pv~k~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~ 240 (1001)
++++ +.++.||||+|||||.|+.|.++ ..|++|+||.+.+|++.++|++||.+|.+|++.+.+.+.+
T Consensus 203 ~li~--g~~l~VdES~LTGES~pv~K~~~-----------~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~ 269 (941)
T TIGR01517 203 VFIS--GLSLEIDESSITGESDPIKKGAP-----------KDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEG 269 (941)
T ss_pred EEEE--cCcEEEEecccCCCCCcccccCC-----------CCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCC
Confidence 9996 34899999999999999999863 3579999999999999999999999999999999888765
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cCCCCc-----cchHHHHHHHHHHHHHHHHhcCCchHHHHHH
Q 001877 241 DEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHF--RDPSHG-----GFLRGAIHYFKIAVALAVAAIPEGLPAVVTT 313 (1001)
Q Consensus 241 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~ 313 (1001)
+++|++++++++.+.+.+++++++++.++++...+ ...... .....+...+..++++++++|||+||+++++
T Consensus 270 -~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti 348 (941)
T TIGR01517 270 -EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTI 348 (941)
T ss_pred -CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHH
Confidence 56799999999999988877766666555442211 000000 0012345667888999999999999999999
Q ss_pred HHHHhhHhhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEeccccCCCceeeeeecCcccCCCCccccC
Q 001877 314 CLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDS 393 (1001)
Q Consensus 314 ~~~~~~~~l~~~~i~~k~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (1001)
+++.++++|+|+|+++|+++++|+||++|+||||||||||+|+|++.+++..+..... ++ ...
T Consensus 349 ~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~--------~~--------~~~- 411 (941)
T TIGR01517 349 ALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNV--------RD--------VLR- 411 (941)
T ss_pred HHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEec--------Cc--------ccc-
Confidence 9999999999999999999999999999999999999999999999999865321110 00 000
Q ss_pred CCccccCCCChHHHHHHHHHhcccccccccccCCCCcceeccCchHHHHHHHHHHcCCCCCCCcchhhhhhhhccccccc
Q 001877 394 SGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYC 473 (1001)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~lc~~~~~~~~~~~~~~~~~~~~~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~ 473 (1001)
...+...+++...+.||+.........+..+..|||+|.|++++++..|.+..
T Consensus 412 --------~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~------------------- 464 (941)
T TIGR01517 412 --------NVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQ------------------- 464 (941)
T ss_pred --------cCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHH-------------------
Confidence 00122333444444454433221111223356799999999999987664321
Q ss_pred CccccccccEEEEecCCCCCceEEEEEeeC-CeEEEEEeCChhHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhh
Q 001877 474 NHHWEIEFKKVSILEFSRDRKMMSVLCSHK-QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAG 552 (1001)
Q Consensus 474 ~~~~~~~~~~l~~~~F~s~~k~msviv~~~-~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (1001)
..+..++++..+||+|+||||+++++.+ +++++++|||||.++++|+.+... +|...++++ .++++.+.+++++.
T Consensus 465 --~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~-~g~~~~~~~-~~~~i~~~~~~~a~ 540 (941)
T TIGR01517 465 --EVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDS-NGEATPISD-DKDRCADVIEPLAS 540 (941)
T ss_pred --HHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhc-CCCcccCcH-HHHHHHHHHHHHHh
Confidence 0123467788999999999999999875 458899999999999999876533 466667776 67888999999998
Q ss_pred hhhhHHHHHHhccCCcccccCccccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCC
Q 001877 553 KEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAF 632 (1001)
Q Consensus 553 ~~g~r~l~~a~k~l~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 632 (1001)
+|+|++++|||.++.++.......|+|++|+|+++++|++|++++++|++||++||+++|+|||+..||.++|+++||.
T Consensus 541 -~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~ 619 (941)
T TIGR01517 541 -DALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGIL 619 (941)
T ss_pred -cCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCC
Confidence 9999999999998654322111247899999999999999999999999999999999999999999999999999998
Q ss_pred CcccccccccccchhhccCChHHHHHhhccceEEEEeChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEEec-
Q 001877 633 DHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG- 711 (1001)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIam~- 711 (1001)
... ..+++|++++.+.++++...+.+..||||++|+||.++|+.+|++|++|+|+|||.||+|||++||||||||
T Consensus 620 ~~~----~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~ 695 (941)
T TIGR01517 620 TFG----GLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGI 695 (941)
T ss_pred CCC----ceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCC
Confidence 653 468999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccHHHHhhcCeeecCCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHhh
Q 001877 712 SGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQLLWVNLVTDG 791 (1001)
Q Consensus 712 ~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 791 (1001)
+|++.|+++||+++.++++..++.++++||+++.|+++++.|.+++|+..++..+++.+++.+.|++++|++|+|+++|+
T Consensus 696 ~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~ 775 (941)
T TIGR01517 696 SGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDT 775 (941)
T ss_pred CccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999888888999999999999999999
Q ss_pred hhhhhhcccCCCccccccCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccccccccccCCCCCC
Q 001877 792 LPATAIGFNKQDSDVMKAKPRKVSEAVVTGWLFFRYLVIGAYVGVATVAGFIWWYVYSNEGPKLPYSELMNFDSCSTRET 871 (1001)
Q Consensus 792 ~p~~~l~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 871 (1001)
+|++++++++|++++|++||++++++++++.++.+++..++++++..+..+++...... ......|+
T Consensus 776 ~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~---- 842 (941)
T TIGR01517 776 LAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGSIFD---------VSGPDEIT---- 842 (941)
T ss_pred hhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc---------ccCccccc----
Confidence 99999999999999999999999999999998888888898887765554432211110 00000000
Q ss_pred CCCCCccCCCcchhhHHHHHHHHHHHHHHHhcccCccccccCCCcchHHHHHHHHHHHHHHHHHhcccccccccccccCc
Q 001877 872 THPCSIFEDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVASIILTMFLHILILYVPPLSVLFSVTPLSW 951 (1001)
Q Consensus 872 ~~~~~~~~~~~~~ti~f~~lv~~~~~~~~~~~~~~~s~~~~~~~~n~~l~~~i~~~~~l~~~i~~~p~~~~~f~~~~l~~ 951 (1001)
......++|++|.+++++|+||.+++|+...+.+..++++|++++.++++.++++++ ++|+++.+|++.++++
T Consensus 843 -----~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~--~~~~~~~~f~~~~l~~ 915 (941)
T TIGR01517 843 -----SHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVI--IVEFGGSFFSTVSLSI 915 (941)
T ss_pred -----ccccchhhHHHHHHHHHHHHHHHHHHccCCcccccccccccHHHHHHHHHHHHHHHH--HHHHHHHHhcccCCCH
Confidence 001133579999999999999999999977533334778999999989888888854 5577889999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHH
Q 001877 952 ADWTAVFYLSFPVIIIDEVLKFFS 975 (1001)
Q Consensus 952 ~~w~~~~~~~~~~l~~~e~~K~~~ 975 (1001)
.+|+++++++++.+++.|++|++.
T Consensus 916 ~~w~~~~~~~~~~~~~~~~~~~~~ 939 (941)
T TIGR01517 916 EQWIGCVLLGMLSLIFGVLLRLIP 939 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999863
No 8
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=7.8e-130 Score=1205.14 Aligned_cols=907 Identities=61% Similarity=0.962 Sum_probs=752.1
Q ss_pred HHHHhcchHHHHHHHHHHHHHHHHHhcC-CCCcccchhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEC
Q 001877 53 VLKQFDDLLVKILIAAAVISFFLALING-ETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRN 131 (1001)
Q Consensus 53 l~~~f~~~~~~~ll~~~i~~~~~~~~~~-~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~R~ 131 (1001)
+++||++|++++|++++++++++++... ......|+++++|+++++++..++++||+|+++.+++|+++.+.+++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 4689999999999999999999875531 222357999999999999999999999999999999999999999999999
Q ss_pred CeEEEeeCCCCCCCcEEEecCCCccCCcEEEeeecCCceEEecccccCCCcccccchhhhcccccccCCCCceEEeccee
Q 001877 132 GCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVV 211 (1001)
Q Consensus 132 g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~~~~g~~~Vdes~LtGEs~pv~k~~~~~~~~~~~~~~~~n~l~~Gt~v 211 (1001)
|++++|+++||||||+|.|++||+|||||++++ ++++.||||+|||||.|+.|.++..........+++|++|+||.+
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~--~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v 158 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLS--LKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLV 158 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEE--ecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEE
Confidence 999999999999999999999999999999997 457999999999999999998764443334456778999999999
Q ss_pred ecceEEEEEEEecccccchhHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC-CccchHHHHH
Q 001877 212 VAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPS-HGGFLRGAIH 290 (1001)
Q Consensus 212 ~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 290 (1001)
.+|++.++|++||.+|.+|++.+++.+++.+++|+++++++++..+..+++++++++++++...+.... ...|...+..
T Consensus 159 ~~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 238 (917)
T TIGR01116 159 VAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIY 238 (917)
T ss_pred ecceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHH
Confidence 999999999999999999999999998888899999999999999888877777777665543322111 1234455556
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHhhHhhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEeccccC
Q 001877 291 YFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQ 370 (1001)
Q Consensus 291 ~~~~~i~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~i~~k~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~ 370 (1001)
.+..+++++++++|++||++++++++.++++|+++++++|+++++|+||++|+||||||||||+|+|++.+++..+..+.
T Consensus 239 ~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~ 318 (917)
T TIGR01116 239 YFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSS 318 (917)
T ss_pred HHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccc
Confidence 66678889999999999999999999999999999999999999999999999999999999999999999988654321
Q ss_pred CCceeeeeecCcccCCCCccccCCCccccCCCChHHHHHHHHHhcccccccccccCCCCcceeccCchHHHHHHHHHHcC
Q 001877 371 GPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVG 450 (1001)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lc~~~~~~~~~~~~~~~~~~~~~e~al~~~a~~~g 450 (1001)
. ...+...+..+++.+......... .....+....+..++++||++.+..+..++.+...|+|+|.||++++++.|
T Consensus 319 ~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g 394 (917)
T TIGR01116 319 S--LNEFCVTGTTYAPEGGVIKDDGPV--AGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMG 394 (917)
T ss_pred c--cceEEecCCccCCCccccccCCcc--cccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcC
Confidence 1 122334444455443322111000 001234456778889999987664332233334469999999999999988
Q ss_pred CCCCCCcchhhhhhhhcccccccCccccccccEEEEecCCCCCceEEEEEeeCCeEEEEEeCChhHHHHhhhhccccCCC
Q 001877 451 LPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNG 530 (1001)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~ 530 (1001)
++..............+ .....+..|++++++||+|+|||||+++++++++.+|+|||||.|+++|+++..+ +|
T Consensus 395 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~pF~s~rK~msviv~~~~~~~~~~KGApe~il~~c~~~~~~-~g 468 (917)
T TIGR01116 395 LPATKNGVSSKRRPALG-----CNSVWNDKFKKLATLEFSRDRKSMSVLCKPSTGNKLFVKGAPEGVLERCTHILNG-DG 468 (917)
T ss_pred CCchhcccccccccccc-----hhHHHHhhcceeeecccChhhCeEEEEEeeCCcEEEEEcCChHHHHHhccceecC-CC
Confidence 76543221111110000 0012245788999999999999999999988889999999999999999987654 57
Q ss_pred ccccCCHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCcccc------cCccc-cCCCcEEEEEecccCCCcHHHHHHHHH
Q 001877 531 FIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQ------TLSYD-DEKDLTFIGLVGMLDPPREEVKNAMLS 603 (1001)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~l~~~~~------~~~~~-~e~~l~~lG~i~~~d~~~~~~~~~I~~ 603 (1001)
...+++++.++++.+.++++++++|+||+++|||.++.++. ...++ +|+|++|+|+++++||+|++++++|++
T Consensus 469 ~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~ 548 (917)
T TIGR01116 469 RAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEK 548 (917)
T ss_pred CeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHH
Confidence 77899999999999999999954899999999999865321 11122 689999999999999999999999999
Q ss_pred HHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeChhhHHHHHHHHhc
Q 001877 604 CMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQN 683 (1001)
Q Consensus 604 l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~ 683 (1001)
||++|++++|+|||+..+|.++|+++|+..+..+.....++|.+++.+.+++......+..||||++|+||.++|+.+|+
T Consensus 549 l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~ 628 (917)
T TIGR01116 549 CRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQE 628 (917)
T ss_pred HHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHh
Confidence 99999999999999999999999999998654433345788999999999888888889999999999999999999999
Q ss_pred cCCEEEEEeCCccCHHHHhcCCceEEecCccHHHHhhcCeeecCCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 001877 684 QNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVV 763 (1001)
Q Consensus 684 ~~~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~ 763 (1001)
.|++|+|+|||.||+|||++||||||||+|++.+|++||+++.++++..+++++++||++|.|+++++.|.+++|+..++
T Consensus 629 ~g~~va~iGDG~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~ 708 (917)
T TIGR01116 629 QGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVV 708 (917)
T ss_pred cCCeEEEecCCcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCChhHHHHHHHHHHHhhhhhhhhcccCCCccccccCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHH
Q 001877 764 CIFVAAVLGIPDTLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMKAKPRKVSEAVVTGWLFFRYLVIGAYVGVATVAGFI 843 (1001)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (1001)
+.+++.+++.+.|++++|++|+|+++|++|++++++++|++++|++||++++++++++++++.|++.|+++++.+++.|.
T Consensus 709 ~~~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ 788 (917)
T TIGR01116 709 CIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFV 788 (917)
T ss_pred HHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999899999999999999999999999999999999999999999999999999999999999999999887666655
Q ss_pred HHHHhhCCCCCCccccccccccCCCCCCCCCCCcc-CCCcchhhHHHHHHHHHHHHHHHhcccCccccccCCCcchHHHH
Q 001877 844 WWYVYSNEGPKLPYSELMNFDSCSTRETTHPCSIF-EDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVA 922 (1001)
Q Consensus 844 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~ti~f~~lv~~~~~~~~~~~~~~~s~~~~~~~~n~~l~~ 922 (1001)
+++... +.. ...+..+..|.. .+.....++ ....++|++|.+++++|+||.++||++..++|..++|+|+++++
T Consensus 789 ~~~~~~-~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~ 863 (917)
T TIGR01116 789 WWYLLT-HFT---GCDEDSFTTCPD-FEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIG 863 (917)
T ss_pred HHHhhc-Ccc---cccccccccccc-cccccccccccccchHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHHHHH
Confidence 443211 100 000000000000 000000000 12346899999999999999999999888888878899999999
Q ss_pred HHHHHHHHHHHHHhcccccccccccccCchhHHHHHHHHHHHHHHHHHHHHHHh
Q 001877 923 SIILTMFLHILILYVPPLSVLFSVTPLSWADWTAVFYLSFPVIIIDEVLKFFSR 976 (1001)
Q Consensus 923 ~i~~~~~l~~~i~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~l~~~e~~K~~~r 976 (1001)
+++++++++++++|+|+++.+|++.++++.+|++++++++..++++|++|+++|
T Consensus 864 ~~~~~~~l~~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 864 AICLSMALHFLILYVPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999998764
No 9
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=4.6e-128 Score=1178.61 Aligned_cols=847 Identities=27% Similarity=0.407 Sum_probs=713.9
Q ss_pred cccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHhcchHHHHHHHHHHHHHHHHHhcC-
Q 001877 2 EDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALING- 80 (1001)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~~i~~~~~~~~~~- 80 (1001)
...|..+++++++.|+++. +|||++|+++|+++||+|+++.++++++|+.+++||++|+.++|+++++++++.+.+..
T Consensus 25 ~~~~~~~~~~v~~~l~~~~-~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~ 103 (903)
T PRK15122 25 AREAANSLEETLANLNTHR-QGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPL 103 (903)
T ss_pred HHHHhCCHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhc
Confidence 4578899999999999994 79999999999999999999999888999999999999999999999999998865431
Q ss_pred -CCCcccchhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEECC------eEEEeeCCCCCCCcEEEecCC
Q 001877 81 -ETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNG------CFSILPAAELVPGDIVEVNVG 153 (1001)
Q Consensus 81 -~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~R~g------~~~~i~~~~Lv~GDiI~l~~G 153 (1001)
......|.++++|+++++++.+++++||+|+++++++|+++.+.+++|+||| ++++|++++|||||+|.|++|
T Consensus 104 ~~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~G 183 (903)
T PRK15122 104 RRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAG 183 (903)
T ss_pred cCCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCC
Confidence 1112468899999999999999999999999999999999999999999994 899999999999999999999
Q ss_pred CccCCcEEEeeecCCceEEecccccCCCcccccchhh----------hcccccccCCCCceEEecceeecceEEEEEEEe
Q 001877 154 CKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDS----------IIATNAVYQDKTNILFSGTVVVAGRARAVVVGV 223 (1001)
Q Consensus 154 ~~iPaD~~ll~~~~g~~~Vdes~LtGEs~pv~k~~~~----------~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~t 223 (1001)
|+|||||++++ ++.+.||||+|||||.|+.|.+.+ ......+..+++|++|+||.+.+|+++++|++|
T Consensus 184 d~IPaDg~li~--g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~at 261 (903)
T PRK15122 184 DMIPADVRLIE--SRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVAT 261 (903)
T ss_pred CEEeeeEEEEE--cCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEe
Confidence 99999999997 456899999999999999998521 111233455778999999999999999999999
Q ss_pred cccccchhHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHhc
Q 001877 224 GANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAI 303 (1001)
Q Consensus 224 G~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~i 303 (1001)
|.+|.+|++.+.+.+ +..++|++++++++.+.+..+.+.++.+++++..... .++...+.+++++++++|
T Consensus 262 G~~T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~---------~~~~~~l~~aisl~V~~~ 331 (903)
T PRK15122 262 GSRTYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTK---------GDWLEALLFALAVAVGLT 331 (903)
T ss_pred ccccHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc---------CCHHHHHHHHHHHHHHHc
Confidence 999999999999877 5667899999999998887776666655555443221 123445677899999999
Q ss_pred CCchHHHHHHHHHHhhHhhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEeccccCCCceeeeeecCcc
Q 001877 304 PEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTT 383 (1001)
Q Consensus 304 P~~L~~~~~~~~~~~~~~l~~~~i~~k~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~ 383 (1001)
||+||++++++++.++.+|+|+|+++|+.+++|+||++|+||||||||||+|+|++.+++..++.
T Consensus 332 Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~--------------- 396 (903)
T PRK15122 332 PEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR--------------- 396 (903)
T ss_pred cchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC---------------
Confidence 99999999999999999999999999999999999999999999999999999999987632110
Q ss_pred cCCCCccccCCCccccCCCChHHHHHHHHHhcccccccccccCCCCcceeccCchHHHHHHHHHHcCCCCCCCcchhhhh
Q 001877 384 YAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNM 463 (1001)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lc~~~~~~~~~~~~~~~~~~~~~e~al~~~a~~~g~~~~~~~~~~~~~ 463 (1001)
..+.+..+ .++|... . ...+||+|.|++++++..+...
T Consensus 397 -------------------~~~~~l~~---a~l~s~~------~----~~~~~p~e~All~~a~~~~~~~---------- 434 (903)
T PRK15122 397 -------------------KDERVLQL---AWLNSFH------Q----SGMKNLMDQAVVAFAEGNPEIV---------- 434 (903)
T ss_pred -------------------ChHHHHHH---HHHhCCC------C----CCCCChHHHHHHHHHHHcCchh----------
Confidence 01122222 2222110 0 1147999999999998755321
Q ss_pred hhhcccccccCccccccccEEEEecCCCCCceEEEEEee-CCeEEEEEeCChhHHHHhhhhccccCCCccccCCHHHHHH
Q 001877 464 LSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSH-KQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAE 542 (1001)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~-~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~~~~ 542 (1001)
....|+.+.++||++.+|+|++++++ ++++++++|||||.++++|++... +|...+++++.+++
T Consensus 435 -------------~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~--~~~~~~l~~~~~~~ 499 (903)
T PRK15122 435 -------------KPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRD--GDTVRPLDEARRER 499 (903)
T ss_pred -------------hhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhc--CCCeecCCHHHHHH
Confidence 02246788899999999999999987 567889999999999999997653 46667888888999
Q ss_pred HHHHHHHHhhhhhhHHHHHHhccCCcccccC--ccccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHH
Q 001877 543 LESRLNSLAGKEALRCLALALKQMPINRQTL--SYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKS 620 (1001)
Q Consensus 543 ~~~~~~~~~~~~g~r~l~~a~k~l~~~~~~~--~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~ 620 (1001)
+.+..++++. +|+|++++|||.++.++... ..+.|+|++|+|+++++||+||+++++|++||++||+++|+|||++.
T Consensus 500 i~~~~~~~a~-~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~ 578 (903)
T PRK15122 500 LLALAEAYNA-DGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPI 578 (903)
T ss_pred HHHHHHHHHh-CCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHH
Confidence 9999999998 99999999999886533211 11257899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeChhhHHHHHHHHhccCCEEEEEeCCccCHHH
Q 001877 621 TAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPA 700 (1001)
Q Consensus 621 ~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~ 700 (1001)
||.++|+++||.. +.+++|.+++.++++++...+++..||||++|+||.++|+.+|++|++|+|+|||.||+||
T Consensus 579 tA~aIA~~lGI~~------~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPA 652 (903)
T PRK15122 579 VTAKICREVGLEP------GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPA 652 (903)
T ss_pred HHHHHHHHcCCCC------CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHH
Confidence 9999999999963 4578999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCceEEecCccHHHHhhcCeeecCCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHH
Q 001877 701 LKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPV 780 (1001)
Q Consensus 701 l~~A~vgIam~~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~~~~~ 780 (1001)
|++||||||||+|+|.||++||+|+.++++..++.++++||.+|.|+++++.|.+..|+..++..+++.++..+.|+++.
T Consensus 653 Lk~ADVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~ 732 (903)
T PRK15122 653 LRDADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAI 732 (903)
T ss_pred HHhCCEEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998888877777666899999
Q ss_pred HHHHHHHHHhhhhhhhhcccCCCccccccCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccccc
Q 001877 781 QLLWVNLVTDGLPATAIGFNKQDSDVMKAKPRKVSEAVVTGWLFFRYLVIGAYVGVATVAGFIWWYVYSNEGPKLPYSEL 860 (1001)
Q Consensus 781 ~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 860 (1001)
|++|+|+++|. |+++++++++++++| +||++++++++++.+++ ....+.+.++.+++.+ ++....+ ..
T Consensus 733 qil~~nli~D~-~~lal~~d~~~~~~m-~~P~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~--~~~~~~~-------~~ 800 (903)
T PRK15122 733 HLLLQNLMYDI-SQLSLPWDKMDKEFL-RKPRKWDAKNIGRFMLW-IGPTSSIFDITTFALM--WFVFAAN-------SV 800 (903)
T ss_pred HHHHHHHHHHH-HHHhhcCCCCCHhhc-CCCCCCChhhhHHHHHH-HHHHHHHHHHHHHHHH--HHHhccC-------cH
Confidence 99999999995 999999999999999 99999999999885442 3222333333222221 1111100 00
Q ss_pred cccccCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHHHHhcccCccccccCCCcchHHHHHHHHHHHHHHHHHhccc-
Q 001877 861 MNFDSCSTRETTHPCSIFEDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVASIILTMFLHILILYVPP- 939 (1001)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~~~~ti~f~~lv~~~~~~~~~~~~~~~s~~~~~~~~n~~l~~~i~~~~~l~~~i~~~p~- 939 (1001)
.+. ...+|..|.+++++|+++.+++|+++. ++|+|++.+..+++++++++++.|+|+
T Consensus 801 ----~~~-------------~~~~t~~f~~l~~~q~~~~~~~R~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 858 (903)
T PRK15122 801 ----EMQ-------------ALFQSGWFIEGLLSQTLVVHMLRTQKI-----PFIQSTAALPVLLTTGLIMAIGIYIPFS 858 (903)
T ss_pred ----hhh-------------hhhHHHHHHHHHHHHHHHHHhhCcCCC-----CcCcchHHHHHHHHHHHHHHHHHHhhHH
Confidence 000 012577799999999999999999754 345577777777888889999999997
Q ss_pred -ccccccccccCchhHHHHHHHHHHHHHHHHHHHHH
Q 001877 940 -LSVLFSVTPLSWADWTAVFYLSFPVIIIDEVLKFF 974 (1001)
Q Consensus 940 -~~~~f~~~~l~~~~w~~~~~~~~~~l~~~e~~K~~ 974 (1001)
++.+|+++++++.+|+++++++++++++.|+.|.+
T Consensus 859 ~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~ 894 (903)
T PRK15122 859 PLGAMVGLEPLPWSYFPWLAATLLGYCLVAQGMKRF 894 (903)
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999988843
No 10
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=2.4e-127 Score=1169.84 Aligned_cols=837 Identities=26% Similarity=0.410 Sum_probs=704.4
Q ss_pred cccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHhcchHHHHHHHHHHHHHHHHHhcCC
Q 001877 2 EDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGE 81 (1001)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~~i~~~~~~~~~~~ 81 (1001)
...+..+++++++.|++++ +|||++||++|+++||+|+++.++++++|+.+++||++|++++++++++++++.
T Consensus 47 ~~~~~~~~~~v~~~l~~~~-~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~------ 119 (902)
T PRK10517 47 LKAAVMPEEELWKTFDTHP-EGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYAT------ 119 (902)
T ss_pred HHHHcCCHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH------
Confidence 4567889999999999996 699999999999999999999999999999999999999999999999999865
Q ss_pred CCcccchhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEC------CeEEEeeCCCCCCCcEEEecCCCc
Q 001877 82 TGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRN------GCFSILPAAELVPGDIVEVNVGCK 155 (1001)
Q Consensus 82 ~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~R~------g~~~~i~~~~Lv~GDiI~l~~G~~ 155 (1001)
+.|.++++|+++++++.+++++||+|+++++++|+++.+.+++|+|| |++++|++++|||||+|.|++||+
T Consensus 120 ---~~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~ 196 (902)
T PRK10517 120 ---EDLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDM 196 (902)
T ss_pred ---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCE
Confidence 35778899999999999999999999999999999999999999999 789999999999999999999999
Q ss_pred cCCcEEEeeecCCceEEecccccCCCcccccchhhhcccccccCCCCceEEecceeecceEEEEEEEecccccchhHHHH
Q 001877 156 IPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDS 235 (1001)
Q Consensus 156 iPaD~~ll~~~~g~~~Vdes~LtGEs~pv~k~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~ 235 (1001)
|||||+|++ +.++.||||+|||||.|+.|.+++.........+++|++|+||.+.+|++.++|++||.+|.+|++.+.
T Consensus 197 IPaDg~li~--g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~ 274 (902)
T PRK10517 197 IPADLRILQ--ARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGR 274 (902)
T ss_pred EeeeEEEEE--cCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHH
Confidence 999999997 456899999999999999999876544445566788999999999999999999999999999999999
Q ss_pred hccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHH
Q 001877 236 MLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCL 315 (1001)
Q Consensus 236 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~~~ 315 (1001)
+.+++.+++|+++.++++++++..++++++.++++++..... ++...+.+++++++++|||+||+++++++
T Consensus 275 v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~~---------~~~~~l~~alsv~V~~~Pe~LP~~vt~~l 345 (902)
T PRK10517 275 VSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTKG---------DWWEAALFALSVAVGLTPEMLPMIVTSTL 345 (902)
T ss_pred hhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcC---------CHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 998888899999999999999888877777766665432211 12345677899999999999999999999
Q ss_pred HHhhHhhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEeccccCCCceeeeeecCcccCCCCccccCCC
Q 001877 316 ALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSG 395 (1001)
Q Consensus 316 ~~~~~~l~~~~i~~k~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (1001)
+.++++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.++.... +.
T Consensus 346 a~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~--------------~~------------- 398 (902)
T PRK10517 346 ARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDIS--------------GK------------- 398 (902)
T ss_pred HHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCC--------------CC-------------
Confidence 999999999999999999999999999999999999999999998763210 00
Q ss_pred ccccCCCChHHHHHHHHHhcccccccccccCCCCcceeccCchHHHHHHHHHHcCCCCCCCcchhhhhhhhcccccccCc
Q 001877 396 IQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNH 475 (1001)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~lc~~~~~~~~~~~~~~~~~~~~~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (1001)
....+ .....+|... + ...+||+|.|++++++..+. .
T Consensus 399 -------~~~~l---l~~a~l~~~~----~------~~~~~p~d~All~~a~~~~~-----------------------~ 435 (902)
T PRK10517 399 -------TSERV---LHSAWLNSHY----Q------TGLKNLLDTAVLEGVDEESA-----------------------R 435 (902)
T ss_pred -------CHHHH---HHHHHhcCCc----C------CCCCCHHHHHHHHHHHhcch-----------------------h
Confidence 11122 2222333211 1 11479999999998764320 0
Q ss_pred cccccccEEEEecCCCCCceEEEEEeeC-CeEEEEEeCChhHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhhh
Q 001877 476 HWEIEFKKVSILEFSRDRKMMSVLCSHK-QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKE 554 (1001)
Q Consensus 476 ~~~~~~~~l~~~~F~s~~k~msviv~~~-~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (1001)
.....|+.+.++||+|++|+|++++++. +...+++||+||.++++|+++.. +|...+++++.++++.+..++++. +
T Consensus 436 ~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~--~~~~~~l~~~~~~~i~~~~~~~a~-~ 512 (902)
T PRK10517 436 SLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRH--NGEIVPLDDIMLRRIKRVTDTLNR-Q 512 (902)
T ss_pred hhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhc--CCCeecCCHHHHHHHHHHHHHHHh-c
Confidence 1123577889999999999999998764 56789999999999999998754 356678888888889999999998 9
Q ss_pred hhHHHHHHhccCCcccccCccccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCc
Q 001877 555 ALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDH 634 (1001)
Q Consensus 555 g~r~l~~a~k~l~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~ 634 (1001)
|+|++++|||+++..+.....+.|+|++|+|+++++||+||+++++|++|+++||+++|+|||++.||.++|+++||..
T Consensus 513 G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~- 591 (902)
T PRK10517 513 GLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA- 591 (902)
T ss_pred CCEEEEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc-
Confidence 9999999999886543322222478999999999999999999999999999999999999999999999999999963
Q ss_pred ccccccccccchhhccCChHHHHHhhccceEEEEeChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEEecCcc
Q 001877 635 LVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGT 714 (1001)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIam~~~~ 714 (1001)
+.+++|.+++.++++++...+++..||||++|+||.++|+.+|++|++|+|+|||.||+|||++||||||||+|+
T Consensus 592 -----~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gt 666 (902)
T PRK10517 592 -----GEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAV 666 (902)
T ss_pred -----cCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcC
Confidence 468899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCeeecCCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHhhhhh
Q 001877 715 AVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPA 794 (1001)
Q Consensus 715 ~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~ 794 (1001)
|.||++||+|+.++++..++.++++||++|.|+++++.|.+..|+..++..+++.++..+.|++|.|++|+|+++| +|+
T Consensus 667 dvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~ 745 (902)
T PRK10517 667 DIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQ 745 (902)
T ss_pred HHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhH
Confidence 9999999999999999999999999999999999999999999999999888877775447999999999999999 789
Q ss_pred hhhcccCCCccccccCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccccccccccCCCCCCCCC
Q 001877 795 TAIGFNKQDSDVMKAKPRKVSEAVVTGWLFFRYLVIGAYVGVATVAGFIWWYVYSNEGPKLPYSELMNFDSCSTRETTHP 874 (1001)
Q Consensus 795 ~~l~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 874 (1001)
++++++++++++|++|||.... .+ ...++..|++.+++.+..|.+++.... +.. .. .
T Consensus 746 ~al~~d~~~~~~m~~p~r~~~~-~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~------~~~-~~-----------~ 802 (902)
T PRK10517 746 VAIPFDNVDDEQIQKPQRWNPA-DL----GRFMVFFGPISSIFDILTFCLMWWVFH------ANT-PE-----------T 802 (902)
T ss_pred HhhcCCCCChhhhcCCCCCCHH-HH----HHHHHHHHHHHHHHHHHHHHHHHHHcc------ccc-hh-----------h
Confidence 9999999999999999973221 22 122334455544443333332221100 000 00 0
Q ss_pred CCccCCCcchhhHHHHHHHHHHHHHHHhcccCccccccCCCcchHHHHHHHHHHHHHHHHHhcc--cccccccccccC--
Q 001877 875 CSIFEDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVASIILTMFLHILILYVP--PLSVLFSVTPLS-- 950 (1001)
Q Consensus 875 ~~~~~~~~~~ti~f~~lv~~~~~~~~~~~~~~~s~~~~~~~~n~~l~~~i~~~~~l~~~i~~~p--~~~~~f~~~~l~-- 950 (1001)
....++..|..++++|+++.+++|+... ++|+|++.+..++.+++++++..|+| +++.+|++++++
T Consensus 803 -----~~~~~~~~F~~~~~~q~~~~~~~R~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~ 872 (902)
T PRK10517 803 -----QTLFQSGWFVVGLLSQTLIVHMIRTRRI-----PFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLS 872 (902)
T ss_pred -----HhHHHHHHHHHHHHHHHHHHHhhccCCC-----CcccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCChh
Confidence 0011344599999999999999999644 45678889999999999999999999 789999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHH
Q 001877 951 WADWTAVFYLSFPVIIIDEVLKFF 974 (1001)
Q Consensus 951 ~~~w~~~~~~~~~~l~~~e~~K~~ 974 (1001)
+..|++++++++. ++.|+.|.+
T Consensus 873 ~~~~~~~~~~~~~--~~~e~~K~~ 894 (902)
T PRK10517 873 YFPWLVAILAGYM--TLTQLVKGF 894 (902)
T ss_pred HHHHHHHHHHHHH--HHHHHHHHH
Confidence 5677777666655 567777753
No 11
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=6.7e-126 Score=1159.52 Aligned_cols=837 Identities=27% Similarity=0.421 Sum_probs=702.9
Q ss_pred CcccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHhcchHHHHHHHHHHHHHHHHHhcC
Q 001877 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALING 80 (1001)
Q Consensus 1 ~~~~~~~~~~~~~~~l~~~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~~i~~~~~~~~~~ 80 (1001)
|.+.|..+.+++++.|+++. +|||++|+++|+++||+|+++.++++++|+.++++|++|++++++++++++++.
T Consensus 12 ~~~~~~~~~~~~~~~l~~~~-~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~----- 85 (867)
T TIGR01524 12 LLKESQMGKETLLRKLGVHE-TGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLT----- 85 (867)
T ss_pred HHHHHhCCHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHH-----
Confidence 45678999999999999985 699999999999999999999998888999999999999999999999999865
Q ss_pred CCCcccchhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE------CCeEEEeeCCCCCCCcEEEecCCC
Q 001877 81 ETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLR------NGCFSILPAAELVPGDIVEVNVGC 154 (1001)
Q Consensus 81 ~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~R------~g~~~~i~~~~Lv~GDiI~l~~G~ 154 (1001)
..|.++++++++++++.++++++|+|+++++++|+++.+.+++|+| ||++++|+++||||||+|.+++||
T Consensus 86 ----~~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd 161 (867)
T TIGR01524 86 ----DDLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGD 161 (867)
T ss_pred ----hhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCC
Confidence 3577889999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred ccCCcEEEeeecCCceEEecccccCCCcccccchhhhcccccccCCCCceEEecceeecceEEEEEEEecccccchhHHH
Q 001877 155 KIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRD 234 (1001)
Q Consensus 155 ~iPaD~~ll~~~~g~~~Vdes~LtGEs~pv~k~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~ 234 (1001)
+|||||++++ +..+.||||+|||||.|+.|.+++....+.+..+++|++|+||.+.+|+++++|++||.+|.+|++.+
T Consensus 162 ~VPaDg~li~--g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~ 239 (867)
T TIGR01524 162 IIPADARVIS--ARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAI 239 (867)
T ss_pred EEcccEEEEe--cCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHH
Confidence 9999999996 45689999999999999999986543344556678899999999999999999999999999999999
Q ss_pred HhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHH
Q 001877 235 SMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTC 314 (1001)
Q Consensus 235 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~~ 314 (1001)
.+.+ +.+++|+++.++++++++..++++++.++++++..... ++...+..++++++++|||+||++++++
T Consensus 240 ~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~---------~~~~~~~~al~l~v~~iP~~Lp~~vt~~ 309 (867)
T TIGR01524 240 AATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMKG---------DWLEAFLFALAVAVGLTPEMLPMIVSSN 309 (867)
T ss_pred HhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhcC---------CHHHHHHHHHHHHHHhCcchHHHHHHHH
Confidence 9988 66789999999999999988887777766655432211 1234567788999999999999999999
Q ss_pred HHHhhHhhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEeccccCCCceeeeeecCcccCCCCccccCC
Q 001877 315 LALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSS 394 (1001)
Q Consensus 315 ~~~~~~~l~~~~i~~k~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (1001)
++.++++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+++... +.
T Consensus 310 la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~--------------~~------------ 363 (867)
T TIGR01524 310 LAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSS--------------GE------------ 363 (867)
T ss_pred HHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCC--------------CC------------
Confidence 9999999999999999999999999999999999999999999998864211 00
Q ss_pred CccccCCCChHHHHHHHHHhcccccccccccCCCCcceeccCchHHHHHHHHHHcCCCCCCCcchhhhhhhhcccccccC
Q 001877 395 GIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCN 474 (1001)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~lc~~~~~~~~~~~~~~~~~~~~~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 474 (1001)
....+ ..+.++|+.. + ...+||+|.|+++++......
T Consensus 364 --------~~~~~---l~~a~l~~~~--~--------~~~~~p~~~Al~~~~~~~~~~---------------------- 400 (867)
T TIGR01524 364 --------TSERV---LKMAWLNSYF--Q--------TGWKNVLDHAVLAKLDESAAR---------------------- 400 (867)
T ss_pred --------CHHHH---HHHHHHhCCC--C--------CCCCChHHHHHHHHHHhhchh----------------------
Confidence 11122 2222233211 0 113699999999988643210
Q ss_pred ccccccccEEEEecCCCCCceEEEEEeeCC-eEEEEEeCChhHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhh
Q 001877 475 HHWEIEFKKVSILEFSRDRKMMSVLCSHKQ-MCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGK 553 (1001)
Q Consensus 475 ~~~~~~~~~l~~~~F~s~~k~msviv~~~~-~~~l~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (1001)
..+..++.+..+||+|+||+|++++++++ ..++++||+||.++++|+++.. +|...+++++.++++.+..++++.
T Consensus 401 -~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~--~~~~~~l~~~~~~~i~~~~~~~a~- 476 (867)
T TIGR01524 401 -QTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRF--GGAVVTLSESEKSELQDMTAEMNR- 476 (867)
T ss_pred -hHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhc--CCceecCCHHHHHHHHHHHHHHHh-
Confidence 01235778889999999999999998654 5789999999999999998754 366678888888889999999998
Q ss_pred hhhHHHHHHhccCCcccccCccccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCC
Q 001877 554 EALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFD 633 (1001)
Q Consensus 554 ~g~r~l~~a~k~l~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~ 633 (1001)
+|+|++++|||+++.++.....+.|.|++|+|+++++||+|++++++|++|+++||+++|+|||++.+|.++|+++||..
T Consensus 477 ~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~ 556 (867)
T TIGR01524 477 QGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA 556 (867)
T ss_pred cCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC
Confidence 99999999999887543222212478999999999999999999999999999999999999999999999999999964
Q ss_pred cccccccccccchhhccCChHHHHHhhccceEEEEeChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEEecCc
Q 001877 634 HLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSG 713 (1001)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIam~~~ 713 (1001)
+.+++|.+++.++++++...+.+..+|||++|+||.++|+.+|++|++|+|+|||.||+|||++||||||||+|
T Consensus 557 ------~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~g 630 (867)
T TIGR01524 557 ------NDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTA 630 (867)
T ss_pred ------CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCc
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHhhcCeeecCCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHhhhh
Q 001877 714 TAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLP 793 (1001)
Q Consensus 714 ~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p 793 (1001)
++.+|++||+|+.++++..++.++++||+++.|+++++.|.+..|+..++..+++.++..+.|+++.|++|+|+++| +|
T Consensus 631 tdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~ 709 (867)
T TIGR01524 631 ADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FS 709 (867)
T ss_pred cHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HH
Confidence 99999999999999999999999999999999999999999999999999888877776668999999999999999 79
Q ss_pred hhhhcccCCCccccccCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccccccccccCCCCCCCC
Q 001877 794 ATAIGFNKQDSDVMKAKPRKVSEAVVTGWLFFRYLVIGAYVGVATVAGFIWWYVYSNEGPKLPYSELMNFDSCSTRETTH 873 (1001)
Q Consensus 794 ~~~l~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 873 (1001)
+++++++++++++|++||+ ++++.+.+ .++..|++.++..+..|.+++...... . +.
T Consensus 710 ~~al~~~~~~~~~m~~p~~-~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~------~---------~~--- 766 (867)
T TIGR01524 710 QLTLPWDKMDREFLKKPHQ-WEQKGMGR----FMLCIGPVSSIFDIATFLLMWFVFSAN------T---------VE--- 766 (867)
T ss_pred HHhhcCCCCChHhhCCCCC-CChhhHHH----HHHHHHHHHHHHHHHHHHHHHHHhccc------c---------hh---
Confidence 9999999999999986665 55543322 233445544443333332221111000 0 00
Q ss_pred CCCccCCCcchhhHHHHHHHHHHHHHHHhcccCccccccCCCcchHHHHHHHHHHHHHHHHHhcccc--cccccccccCc
Q 001877 874 PCSIFEDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVASIILTMFLHILILYVPPL--SVLFSVTPLSW 951 (1001)
Q Consensus 874 ~~~~~~~~~~~ti~f~~lv~~~~~~~~~~~~~~~s~~~~~~~~n~~l~~~i~~~~~l~~~i~~~p~~--~~~f~~~~l~~ 951 (1001)
.....+|..|.+++++|+++.+++|+++. ++|+|++++.++++++++++++.|+|++ +.+|+++++++
T Consensus 767 -----~~~~~~t~~f~~~~~~~~~~~~~~R~~~~-----~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~ 836 (867)
T TIGR01524 767 -----EQALFQSGWFVVGLLSQTLVVHMIRTEKI-----PFIQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPL 836 (867)
T ss_pred -----hhhHHHHHHHHHHHHHHHHHHHhhCcCCC-----CcCcchHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCCc
Confidence 01112577799999999999999998644 4567899999999999999999999974 88999998854
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHHH
Q 001877 952 --ADWTAVFYLSFPVIIIDEVLKFF 974 (1001)
Q Consensus 952 --~~w~~~~~~~~~~l~~~e~~K~~ 974 (1001)
..|++++.+++. ++.|++|.+
T Consensus 837 ~~~~~~~~~~~~~~--~~~e~~k~~ 859 (867)
T TIGR01524 837 SYFPWLIAILVGYM--ATMQLVKTF 859 (867)
T ss_pred cHHHHHHHHHHHHH--HHHHHHHHH
Confidence 456666665554 567887753
No 12
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.7e-126 Score=1051.63 Aligned_cols=923 Identities=31% Similarity=0.461 Sum_probs=785.1
Q ss_pred ccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHhcchHHHHHHHHHHHHHHHHHhcC--
Q 001877 3 DAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALING-- 80 (1001)
Q Consensus 3 ~~~~~~~~~~~~~l~~~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~~i~~~~~~~~~~-- 80 (1001)
+.|+++++|+.+++++|..+|||.+++.+++++-|+|.+++|+.++-|..|.+|+.+.+.++++++++++++.+.+..
T Consensus 38 ~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~ 117 (1019)
T KOG0203|consen 38 DDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQAST 117 (1019)
T ss_pred ccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhccc
Confidence 479999999999999999999999999999999999999999999999999999999999999999999998877652
Q ss_pred --CCCcccchhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEECCeEEEeeCCCCCCCcEEEecCCCccCC
Q 001877 81 --ETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPA 158 (1001)
Q Consensus 81 --~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPa 158 (1001)
+.+....+.++++..++.+.+...++|+.|..+.++.++++.|..++|+|||+...+.+++||+||+|.++-||+|||
T Consensus 118 ~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrVPA 197 (1019)
T KOG0203|consen 118 EDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGDRVPA 197 (1019)
T ss_pred CCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCCcccc
Confidence 222345566777778888888999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEeeecCCceEEecccccCCCcccccchhhhcccccccCCCCceEEecceeecceEEEEEEEecccccchhHHHHhcc
Q 001877 159 DMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQ 238 (1001)
Q Consensus 159 D~~ll~~~~g~~~Vdes~LtGEs~pv~k~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~ 238 (1001)
|.++++ +..++||+|+|||||.|..+.+.... ..+.+..|+.|.+|.+++|.++++|++||.+|.+|+++.....
T Consensus 198 DiRiis--~~g~~vdnsslTGesEP~~~~~~~t~---~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~ 272 (1019)
T KOG0203|consen 198 DIRIIS--ATGCKVDNSSLTGESEPQTRSPEFTH---ENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASG 272 (1019)
T ss_pred eeEEEE--ecceeEeccccccccCCccCCccccc---cCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhcc
Confidence 999997 67899999999999999998875432 3337789999999999999999999999999999999998888
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHh
Q 001877 239 TEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALG 318 (1001)
Q Consensus 239 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~ 318 (1001)
.+..++|++++++++..++..+++.+.+..|.+...... .++..+.+.++++++.+|++|+++++.++...
T Consensus 273 ~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~gy---------~~l~avv~~i~iivAnvPeGL~~tvTv~Ltlt 343 (1019)
T KOG0203|consen 273 LEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILGY---------EWLRAVVFLIGIIVANVPEGLLATVTVCLTLT 343 (1019)
T ss_pred CCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhcc---------hhHHHhhhhheeEEecCcCCccceehhhHHHH
Confidence 889999999999999999988887777777666554321 23444555788889999999999999999999
Q ss_pred hHhhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEeccccCCCceeeeeecCcccCCCCccccCCCccc
Q 001877 319 TKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQL 398 (1001)
Q Consensus 319 ~~~l~~~~i~~k~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (1001)
++||+++++++|++.+.|+||+.++||+|||||||+|+|+|.++|........... .+..++
T Consensus 344 akrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~---------~~~~~~--------- 405 (1019)
T KOG0203|consen 344 AKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTT---------EDQSGQ--------- 405 (1019)
T ss_pred HHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeech---------hhhhcc---------
Confidence 99999999999999999999999999999999999999999999987543321000 000111
Q ss_pred cCCCChHHHHHHHHHhcccccccccccCCC---CcceeccCchHHHHHHHHHHcCCCCCCCcchhhhhhhhcccccccCc
Q 001877 399 EFPAQLPCLLHIARCSALCNESVLQYNPDK---GNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNH 475 (1001)
Q Consensus 399 ~~~~~~~~~~~~~~~~~lc~~~~~~~~~~~---~~~~~~~~~~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (1001)
......+....+..|+.+||.+.......+ -.....|++.|.||+++++-.-.+. .
T Consensus 406 ~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~---------------------~ 464 (1019)
T KOG0203|consen 406 SFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSV---------------------M 464 (1019)
T ss_pred cccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchH---------------------H
Confidence 111235667788999999999876532111 2234569999999999987542110 1
Q ss_pred cccccccEEEEecCCCCCceEEEEEeeCC----eEEEEEeCChhHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHh
Q 001877 476 HWEIEFKKVSILEFSRDRKMMSVLCSHKQ----MCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLA 551 (1001)
Q Consensus 476 ~~~~~~~~l~~~~F~s~~k~msviv~~~~----~~~l~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (1001)
..++.++++.++||+|.+|+.-.+.+.++ +..+.+|||||.++++|+.+..+ |...|++++.++.+.+.+.++.
T Consensus 465 ~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~--g~e~pld~~~~~~f~~ay~~lg 542 (1019)
T KOG0203|consen 465 ELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILIN--GEEKPLDEKLKEAFQEAYLELG 542 (1019)
T ss_pred HHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeec--CCCCCcCHHHHHHHHHHHHHhh
Confidence 23557788999999999999887776543 77899999999999999998875 7888999999999999999999
Q ss_pred hhhhhHHHHHHhccCCcccccCccc--------cCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHH
Q 001877 552 GKEALRCLALALKQMPINRQTLSYD--------DEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAE 623 (1001)
Q Consensus 552 ~~~g~r~l~~a~k~l~~~~~~~~~~--------~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~ 623 (1001)
+ .|-||++|+++.++.++....+. --.++.|+|++++-||+|..+++++.+||+|||||+|+|||++.||+
T Consensus 543 ~-~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAk 621 (1019)
T KOG0203|consen 543 G-LGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAK 621 (1019)
T ss_pred h-cchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhh
Confidence 9 99999999999998765332221 23589999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCcccc--------------------cccccccchhhccCChHHHHHhhcc--ceEEEEeChhhHHHHHHHH
Q 001877 624 SICHKIGAFDHLVD--------------------FVGRSYTASEFEELPAMQQTVALQH--MALFTRVEPSHKRMLVEAL 681 (1001)
Q Consensus 624 ~ia~~~gi~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~r~~p~~K~~~v~~l 681 (1001)
++|++.||...... ....+++|.++.++..+++++++.+ ..||||.+|+||..||+..
T Consensus 622 AiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~c 701 (1019)
T KOG0203|consen 622 AIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGC 701 (1019)
T ss_pred hhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhh
Confidence 99999997653321 1235789999999999999998874 3699999999999999999
Q ss_pred hccCCEEEEEeCCccCHHHHhcCCceEEec-CccHHHHhhcCeeecCCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 001877 682 QNQNEVVAMTGDGVNDAPALKKADIGIAMG-SGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIG 760 (1001)
Q Consensus 682 ~~~~~~v~~iGDg~ND~~~l~~A~vgIam~-~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~ 760 (1001)
|++|++|+++|||.||+||||.|||||||| .|+|++|++||+|++||++.+++..+++||.+++|+||.|.|.+++|+.
T Consensus 702 Qr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNip 781 (1019)
T KOG0203|consen 702 QRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIP 781 (1019)
T ss_pred hhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcch
Confidence 999999999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCChhHHHHHHHHHHHhhhhhhhhcccCCCccccccCCCC-CCCCccchHH-HHHHHHHHHHHHHHH
Q 001877 761 EVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMKAKPRK-VSEAVVTGWL-FFRYLVIGAYVGVAT 838 (1001)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~P~~-~~~~~~~~~~-~~~~~~~~~~~~~~~ 838 (1001)
++.+.+++.++++|.|+.++++|.+++.+|++|+++|++|+|+.++|+|+||+ +.+.++|.+. .+.|+.+|++++++.
T Consensus 782 EI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~ag 861 (1019)
T KOG0203|consen 782 EITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAG 861 (1019)
T ss_pred hHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhccCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998 6778888764 478888999999888
Q ss_pred HHHHHHHHHhhCCCCCCcccccc-cc----------ccCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHHHHhcccCc
Q 001877 839 VAGFIWWYVYSNEGPKLPYSELM-NF----------DSCSTRETTHPCSIFEDRHPSTVSMTVLVVVEMFNALNNLSENQ 907 (1001)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~l~-~~----------~~~~~~~~~~~~~~~~~~~~~ti~f~~lv~~~~~~~~~~~~~~~ 907 (1001)
++.|+..+.. +|-.......+. +| ++.+.|..+... +-....+|.+|.+++..|+++++.|++++.
T Consensus 862 F~tYFvima~-nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk--~le~tc~taFfvsIvV~Q~adLii~KTRRn 938 (1019)
T KOG0203|consen 862 FFTYFVIMAE-NGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTYEQRK--YLEYTCYTAFFISIVVVQWADLIICKTRRN 938 (1019)
T ss_pred HHHHHHHHHH-cCCChHHHHhhHHhhhhhhhhhhhhhccccccHHHHH--HHHHhhhhheeeeehHHhHhhHHhhhcchh
Confidence 7776655433 221111111110 11 122334221000 001123789999999999999999999999
Q ss_pred cccccCCCcchHHHHHHHHHHHHHHHHHhcccccccccccccCchhHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhh
Q 001877 908 SLLVIPPWSNLWLVASIILTMFLHILILYVPPLSVLFSVTPLSWADWTAVFYLSFPVIIIDEVLKFFSRKSSGMRFKFWF 987 (1001)
Q Consensus 908 s~~~~~~~~n~~l~~~i~~~~~l~~~i~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~l~~~e~~K~~~r~~~~~~~~~~~ 987 (1001)
|+|.++ ++||.+++++++.+++..++.|.|+....+++.++.+.+|+..+.++++.+++||++|++.|.| +..|+
T Consensus 939 SlfqqG-mrN~vl~f~v~~e~~La~fl~y~pg~~~~l~~~pl~~~~wl~a~P~~ilIfvydE~Rk~~IR~~----P~gw~ 1013 (1019)
T KOG0203|consen 939 SIFQQG-MRNKVLIFAVIFETCLACFLCYCPGVLYALGMYPLKFQWWLVAFPFGILIFVYDEVRKLFIRRY----PGGWL 1013 (1019)
T ss_pred HHHHhh-hhhhhHHHHHHHHHHHHHHHhcCccHHHHhccCCCCcEEEEecccceeeeeeHHHHHhHhhhhC----CCchh
Confidence 999987 8899999999999999999999999999999999999999999999999999999999987754 55665
Q ss_pred hc
Q 001877 988 RR 989 (1001)
Q Consensus 988 ~~ 989 (1001)
+|
T Consensus 1014 e~ 1015 (1019)
T KOG0203|consen 1014 EK 1015 (1019)
T ss_pred hh
Confidence 54
No 13
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=4.7e-114 Score=1078.69 Aligned_cols=833 Identities=22% Similarity=0.264 Sum_probs=652.2
Q ss_pred CCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHhcchHHHHHHHHHHHHHHHHHhcCCCCcccchhhHHHHHHHhhH
Q 001877 21 TKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAAN 100 (1001)
Q Consensus 21 ~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~ 100 (1001)
..|||++|+++|+++||+|+++.++ +++|+.++++|.+|++++++++.+++++. .+|+++++++++++++
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~-~s~~~ll~~~~~~p~~i~~i~~~~l~~~~---------~~~~~~~~i~~i~~~~ 206 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPV-PSFLELLKEEVLHPFYVFQVFSVILWLLD---------EYYYYSLCIVFMSSTS 206 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCC-CCHHHHHHHHHhchHHHHHHHHHHHHHhh---------hhHHHHHHHHHHHHHH
Confidence 4699999999999999999999865 68999999999999999988876665532 3577888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcEEEEECCeEEEeeCCCCCCCcEEEec--CCCccCCcEEEeeecCCceEEeccccc
Q 001877 101 AAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVN--VGCKIPADMRMIEMLSNQLRVDQAILT 178 (1001)
Q Consensus 101 ~~~~~~~~~~~~~~~~~l~~~~~~~~~v~R~g~~~~i~~~~Lv~GDiI~l~--~G~~iPaD~~ll~~~~g~~~Vdes~Lt 178 (1001)
..+..++++|+.+.++++.. .+..++|+|||++++|+++||||||||.|+ +|++|||||+|++ |++.||||+||
T Consensus 207 ~~~~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~---g~~~VdES~LT 282 (1054)
T TIGR01657 207 ISLSVYQIRKQMQRLRDMVH-KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLS---GSCIVNESMLT 282 (1054)
T ss_pred HHHHHHHHHHHHHHHHHhhc-CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEe---CcEEEeccccc
Confidence 99999999999888888755 456899999999999999999999999999 9999999999995 68999999999
Q ss_pred CCCcccccchhhhc--c---cccccCCCCceEEecceeec-------ceEEEEEEEecccccchhHHHHhccCCCCCCch
Q 001877 179 GESCSVEKELDSII--A---TNAVYQDKTNILFSGTVVVA-------GRARAVVVGVGANTAMGSIRDSMLQTEDEVTPL 246 (1001)
Q Consensus 179 GEs~pv~k~~~~~~--~---~~~~~~~~~n~l~~Gt~v~~-------g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l 246 (1001)
|||.|+.|.+.+.. . ......+++|++|+||.+++ |.+.++|++||.+|..|++.+++..++...+++
T Consensus 283 GES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~ 362 (1054)
T TIGR01657 283 GESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKF 362 (1054)
T ss_pred CCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCch
Confidence 99999999875321 1 11223567899999999985 789999999999999999999999888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhHhhhhcc
Q 001877 247 KKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLN 326 (1001)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ 326 (1001)
++...++...+..++++.++++++..... . ..+...+..++.++++++|++||++++++++.+..||+|++
T Consensus 363 ~~~~~~~~~~l~~~a~i~~i~~~~~~~~~-~--------~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~ 433 (1054)
T TIGR01657 363 YKDSFKFILFLAVLALIGFIYTIIELIKD-G--------RPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKG 433 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHc-C--------CcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCC
Confidence 99988887766555444333333222211 1 12345677789999999999999999999999999999999
Q ss_pred ccccccccccccCCeeEEEeCCCCccccCceEEEEEEEeccccCCCceeeeeecCcccCCCCccccCCCccccCCCChHH
Q 001877 327 AIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPC 406 (1001)
Q Consensus 327 i~~k~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (1001)
++||+++++|.+|++|++|||||||||+|+|+|.+++..+..... .... . .. ....
T Consensus 434 il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~--------~~~~--~------~~--------~~~~ 489 (1054)
T TIGR01657 434 IFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEF--------LKIV--T------ED--------SSLK 489 (1054)
T ss_pred EEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCcccc--------cccc--c------cc--------cccC
Confidence 999999999999999999999999999999999999865321100 0000 0 00 0011
Q ss_pred HHHHHHHhcccccccccccCCCCcceeccCchHHHHHHHHHHcCCCCCC-CcchhhhhhhhcccccccCccccccccEEE
Q 001877 407 LLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFD-SMPSALNMLSKHERASYCNHHWEIEFKKVS 485 (1001)
Q Consensus 407 ~~~~~~~~~lc~~~~~~~~~~~~~~~~~~~~~e~al~~~a~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 485 (1001)
...+..+++.||+..... + ...|||+|.|+++++ |+.... .....-........ ......++++++
T Consensus 490 ~~~~~~~~a~C~~~~~~~----~--~~~Gdp~E~al~~~~---~~~~~~~~~~~~~~~~~~~i~----~~~~~~~~~il~ 556 (1054)
T TIGR01657 490 PSITHKALATCHSLTKLE----G--KLVGDPLDKKMFEAT---GWTLEEDDESAEPTSILAVVR----TDDPPQELSIIR 556 (1054)
T ss_pred chHHHHHHHhCCeeEEEC----C--EEecCHHHHHHHHhC---CCEEECCCCccccccccccee----ccCCCceEEEEE
Confidence 123455678899875321 2 457999999999875 222111 00000000000000 000124689999
Q ss_pred EecCCCCCceEEEEEeeC--CeEEEEEeCChhHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhhhhhHHHHHHh
Q 001877 486 ILEFSRDRKMMSVLCSHK--QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALAL 563 (1001)
Q Consensus 486 ~~~F~s~~k~msviv~~~--~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~ 563 (1001)
.+||+|++|||||+++.+ ++.++|+|||||.|+++|++.. .++.+.+.+++++. +|+||+++||
T Consensus 557 ~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~~-------------~p~~~~~~~~~~a~-~G~RVLalA~ 622 (1054)
T TIGR01657 557 RFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPET-------------VPSDYQEVLKSYTR-EGYRVLALAY 622 (1054)
T ss_pred EEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCcC-------------CChhHHHHHHHHHh-cCCEEEEEEE
Confidence 999999999999999875 4578999999999999997411 12457778899998 9999999999
Q ss_pred ccCCcccc----cCccc-cCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccc-
Q 001877 564 KQMPINRQ----TLSYD-DEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVD- 637 (1001)
Q Consensus 564 k~l~~~~~----~~~~~-~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~- 637 (1001)
|+++..+. ....+ .|+||+|+|+++++|++||+++++|++|+++||+++|+|||++.||.++|+++||......
T Consensus 623 k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~v 702 (1054)
T TIGR01657 623 KELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTL 702 (1054)
T ss_pred eecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceE
Confidence 99874211 11223 7899999999999999999999999999999999999999999999999999999654310
Q ss_pred ------------------------------------------------cccccccchhhcc---CChHHHHHhhccceEE
Q 001877 638 ------------------------------------------------FVGRSYTASEFEE---LPAMQQTVALQHMALF 666 (1001)
Q Consensus 638 ------------------------------------------------~~~~~~~~~~~~~---~~~~~~~~~~~~~~v~ 666 (1001)
....+++|++++. +.++++...+.+..||
T Consensus 703 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~Vf 782 (1054)
T TIGR01657 703 ILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVF 782 (1054)
T ss_pred EEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEE
Confidence 0013566666654 3445677788899999
Q ss_pred EEeChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEEecCccHHHHhhcCeeecCCCchHHHHHHHHhHHHHHH
Q 001877 667 TRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNN 746 (1001)
Q Consensus 667 ~r~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~ 746 (1001)
||++|+||.++|+.+|+.|++|+|+|||+||+||||+||||||||++ + |..+||+++.++++.+++.+|++||+++.|
T Consensus 783 AR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-d-as~AA~f~l~~~~~~~I~~~I~eGR~~l~~ 860 (1054)
T TIGR01657 783 ARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-E-ASVAAPFTSKLASISCVPNVIREGRCALVT 860 (1054)
T ss_pred EecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-c-ceeecccccCCCcHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999865 3 458899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHhhhhhhhhcccCCCccccccCCCCCCCCccchHHHHH
Q 001877 747 TKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMKAKPRKVSEAVVTGWLFFR 826 (1001)
Q Consensus 747 i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~P~~~~~~~~~~~~~~~ 826 (1001)
++++++|++.+++..++..++..+ .+.+++++|++|+|++++.+++++|+.++|.+++|+++|. ++++++.++.+
T Consensus 861 ~~~~~~~~~~~~~~~~~~~~~l~~--~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~P~---~~l~~~~~~~s 935 (1054)
T TIGR01657 861 SFQMFKYMALYSLIQFYSVSILYL--IGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKERPP---SNLFSVYILTS 935 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--ccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCCCC---ccccCHHHHHH
Confidence 999999999999888766555443 4478999999999999999999999999999999999984 68999999899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCCCccccccccccCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHHHHhcccC
Q 001877 827 YLVIGAYVGVATVAGFIWWYVYSNEGPKLPYSELMNFDSCSTRETTHPCSIFEDRHPSTVSMTVLVVVEMFNALNNLSEN 906 (1001)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ti~f~~lv~~~~~~~~~~~~~~ 906 (1001)
++.+++++.+..+.++.+... . .|..-.. ..+ ....+......|++| .++..|.+..+.+++.
T Consensus 936 i~~q~~i~~~~~~~~~~~~~~--~-----~~~~~~~------~~~--~~~~~~~~~~~T~~f-~~~~~~~~~~~~~~~~- 998 (1054)
T TIGR01657 936 VLIQFVLHILSQVYLVFELHA--Q-----PWYKPEN------PVD--LEKENFPNLLNTVLF-FVSSFQYLITAIVNSK- 998 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHhh--C-----CCccCCC------CCC--cccccCccHHHHHHH-HHHHHHHHHheEEEcC-
Confidence 888888887766555543321 1 1100000 000 000011112257777 5556666667777774
Q ss_pred ccccccCCCcchHHHHHHHHHHHHHHHH--HhcccccccccccccCc
Q 001877 907 QSLLVIPPWSNLWLVASIILTMFLHILI--LYVPPLSVLFSVTPLSW 951 (1001)
Q Consensus 907 ~s~~~~~~~~n~~l~~~i~~~~~l~~~i--~~~p~~~~~f~~~~l~~ 951 (1001)
+++|+.++++|+++++++++.+++++.+ .+.|.++.+|++.+++.
T Consensus 999 g~pf~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 1045 (1054)
T TIGR01657 999 GPPFREPIYKNKPFVYLLITGLGLLLVLLLDPHPLLGKILQIVPLPQ 1045 (1054)
T ss_pred CcchhhhHHHhHHHHHHHHHHHHHHHHhhhCCCHHHHhhheeeeCCH
Confidence 7889999999999998888877666532 36889999999999885
No 14
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=4.4e-112 Score=1025.33 Aligned_cols=751 Identities=28% Similarity=0.419 Sum_probs=624.0
Q ss_pred CCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHhcchHHHHHHHHHHHHHHHHHhcCCCCcccchhhHHHHHHHhhHHH
Q 001877 23 GLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAA 102 (1001)
Q Consensus 23 GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~ 102 (1001)
|||++||++|+++||+|+++.++ ++.|+.|+++|++|++++++++++++++. +.|.++++++++++++..
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~~-~~~~~~~~~~~~~~~~~lL~~aa~~s~~~---------~~~~~~~~i~~~~~i~~~ 70 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEKK-VSPLLKFLGFFWNPLSWVMEAAAIIAIAL---------ENWVDFVIILGLLLLNAT 70 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCCC-CCHHHHHHHHHhchHHHHHHHHHHHHHhh---------cchhhhhhhhhhhHHHHH
Confidence 89999999999999999999855 45789999999999999999999999875 357888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCcEEEEECCeEEEeeCCCCCCCcEEEecCCCccCCcEEEeeecCCceEEecccccCCCc
Q 001877 103 VGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESC 182 (1001)
Q Consensus 103 ~~~~~~~~~~~~~~~l~~~~~~~~~v~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~~~~g~~~Vdes~LtGEs~ 182 (1001)
++++||+|+++++++|+++.+.+++|+|||++++|+++||+|||+|.+++||+|||||++++ +.++.||||+|||||.
T Consensus 71 i~~~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~--g~~~~VDeS~LTGES~ 148 (755)
T TIGR01647 71 IGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFE--GDYIQVDQAALTGESL 148 (755)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEe--cCceEEEcccccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999996 3349999999999999
Q ss_pred ccccchhhhcccccccCCCCceEEecceeecceEEEEEEEecccccchhHHHHhccCCCCCCchHHHHHHHHHHHHHHHH
Q 001877 183 SVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIA 262 (1001)
Q Consensus 183 pv~k~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 262 (1001)
|+.|.+ +|.+|+||.+.+|+++++|++||.+|.+|++.+.+.+.+.+++|+++.+++++.+++++++
T Consensus 149 PV~K~~-------------~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~ 215 (755)
T TIGR01647 149 PVTKKT-------------GDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIG 215 (755)
T ss_pred ceEecc-------------CCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHH
Confidence 999986 5789999999999999999999999999999999998888889999999999999998888
Q ss_pred HHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhHhhhhccccccccccccccCCee
Q 001877 263 GICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTT 342 (1001)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~i~~k~~~~~e~lg~v~ 342 (1001)
+++++.++++..... .++...+.+++++++++|||+||++++++++.++++|+|+|+++|+++++|+||++|
T Consensus 216 ~~~~i~~~~~~~~~~--------~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~ 287 (755)
T TIGR01647 216 VLVLIELVVLFFGRG--------ESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMD 287 (755)
T ss_pred HHHHHHHHHHHHHcC--------CCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCc
Confidence 888777766544221 123445777899999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCccccCceEEEEEEEeccccCCCceeeeeecCcccCCCCccccCCCccccCCCChHHHHHHHHHhcccccccc
Q 001877 343 VICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVL 422 (1001)
Q Consensus 343 ~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lc~~~~~ 422 (1001)
++|||||||||+|+|+|.+++..++.. ..+.+ ....++|++.
T Consensus 288 ~i~~DKTGTLT~~~~~v~~~~~~~~~~---------------------------------~~~~~---l~~a~~~~~~-- 329 (755)
T TIGR01647 288 ILCSDKTGTLTLNKLSIDEILPFFNGF---------------------------------DKDDV---LLYAALASRE-- 329 (755)
T ss_pred EEEecCCCccccCceEEEEEEecCCCC---------------------------------CHHHH---HHHHHHhCCC--
Confidence 999999999999999999987642100 11122 2233344321
Q ss_pred cccCCCCcceeccCchHHHHHHHHHHcCCCCCCCcchhhhhhhhcccccccCccccccccEEEEecCCCCCceEEEEEee
Q 001877 423 QYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSH 502 (1001)
Q Consensus 423 ~~~~~~~~~~~~~~~~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~ 502 (1001)
..+||.|.|+++++++.+. ....|+++..+||++.+|+|++++++
T Consensus 330 ----------~~~~pi~~Ai~~~~~~~~~-------------------------~~~~~~~~~~~pf~~~~k~~~~~v~~ 374 (755)
T TIGR01647 330 ----------EDQDAIDTAVLGSAKDLKE-------------------------ARDGYKVLEFVPFDPVDKRTEATVED 374 (755)
T ss_pred ----------CCCChHHHHHHHHHHHhHH-------------------------HHhcCceEEEeccCCCCCeEEEEEEe
Confidence 1369999999998765320 01246778899999999999999876
Q ss_pred C--CeEEEEEeCChhHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCcccccCccccCCC
Q 001877 503 K--QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKD 580 (1001)
Q Consensus 503 ~--~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~l~~~~~~~~~~~e~~ 580 (1001)
+ ++.++++||+||.++++|++. .+.++++.+.+++++. +|+|++++|+|. .|.+
T Consensus 375 ~~~g~~~~~~kGa~e~il~~c~~~------------~~~~~~~~~~~~~~~~-~G~rvl~vA~~~-----------~e~~ 430 (755)
T TIGR01647 375 PETGKRFKVTKGAPQVILDLCDNK------------KEIEEKVEEKVDELAS-RGYRALGVARTD-----------EEGR 430 (755)
T ss_pred CCCceEEEEEeCChHHHHHhcCCc------------HHHHHHHHHHHHHHHh-CCCEEEEEEEEc-----------CCCC
Confidence 3 567889999999999999641 2345667788889998 999999999973 2578
Q ss_pred cEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhh
Q 001877 581 LTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVAL 660 (1001)
Q Consensus 581 l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (1001)
++|+|+++++||+||+++++|++||++||+++|+|||++.+|.++|+++||...... .....++.+.+.++++++.+.+
T Consensus 431 l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~~-~~~l~~~~~~~~~~~~~~~~~~ 509 (755)
T TIGR01647 431 WHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYT-ADVLLKGDNRDDLPSGELGEMV 509 (755)
T ss_pred cEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCcC-HHHhcCCcchhhCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999753211 1223445566678888899999
Q ss_pred ccceEEEEeChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEEecCccHHHHhhcCeeecCCCchHHHHHHHHh
Q 001877 661 QHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEG 740 (1001)
Q Consensus 661 ~~~~v~~r~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~~ad~v~~~~~~~~i~~~i~~g 740 (1001)
++..+|||++|+||.++|+.+|++|++|+|+|||.||+|||++||||||||+|++.+|++||+|+.++++..++.++++|
T Consensus 510 ~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~g 589 (755)
T TIGR01647 510 EDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILES 589 (755)
T ss_pred HhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHhhhhhhhhcccCCCccccccCCCCCCCCccc
Q 001877 741 RAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMKAKPRKVSEAVVT 820 (1001)
Q Consensus 741 R~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~P~~~~~~~~~ 820 (1001)
|+++.|+++++.|.+..|+..+++.++..++ .+.|++|+|++|+|+++|. |+++++++++++ |+++++..+.
T Consensus 590 R~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~-~~~~l~~~~il~~~l~~d~-~~~~l~~~~~~~------~~~p~~~~~~ 661 (755)
T TIGR01647 590 RKIFQRMKSYVIYRIAETIRIVFFFGLLILI-LNFYFPPIMVVIIAILNDG-TIMTIAYDNVKP------SKLPQRWNLR 661 (755)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHHHHHHH-hCcchhHHHHHHHHHHHhH-hHhhccCCCCCC------CCCCCccchH
Confidence 9999999999999999999988776666543 2235999999999999996 799999999874 3333333333
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccccccccccCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHHH
Q 001877 821 GWLFFRYLVIGAYVGVATVAGFIWWYVYSNEGPKLPYSELMNFDSCSTRETTHPCSIFEDRHPSTVSMTVLVVVEMFNAL 900 (1001)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ti~f~~lv~~~~~~~~ 900 (1001)
..+...+..|++.++.++.+++|.+. .. .+..... . . . ....++|+.|..++++|.++.+
T Consensus 662 -~~~~~~~~~g~~~~~~~~~~~~~~~~--~~----~~~~~~~-------~---~--~-~~~~~~t~~f~~~~~~~~~~~~ 721 (755)
T TIGR01647 662 -EVFTMSTVLGIYLVISTFLLLAIALD--TS----FFIDKFG-------L---Q--L-LHGNLQSLIYLQVSISGQATIF 721 (755)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHh--cc----cchhccc-------c---c--c-cHhhhHHHHHHHHHHHHHHHHh
Confidence 44455566777776655544433321 00 0000000 0 0 0 0123589999999999999999
Q ss_pred HhcccCccccccCCCcchHHHHHHHHHHHHHHHHH
Q 001877 901 NNLSENQSLLVIPPWSNLWLVASIILTMFLHILIL 935 (1001)
Q Consensus 901 ~~~~~~~s~~~~~~~~n~~l~~~i~~~~~l~~~i~ 935 (1001)
++|++..++. .++++++++++++..++..++.
T Consensus 722 ~~r~~~~~~~---~~p~~~l~~~~~~~~~~~~~~~ 753 (755)
T TIGR01647 722 VTRTHGFFWS---ERPGKLLFIAFVIAQIIATFIA 753 (755)
T ss_pred eeccCCCCcc---cCCcHHHHHHHHHHHHHHHHHh
Confidence 9999655442 2467888888888877776654
No 15
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=4.7e-109 Score=1037.74 Aligned_cols=889 Identities=21% Similarity=0.244 Sum_probs=657.5
Q ss_pred cCCCCCCCCcCccH---HHHHHHHhcchHHHHHHHHHHHHHHHHHhcCCCCcccchhhHHHHHHHhhHHHHHHHHHHHHH
Q 001877 36 YGKNVLPQEKRTAF---WKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNAE 112 (1001)
Q Consensus 36 ~G~N~i~~~~~~~~---~~~l~~~f~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 112 (1001)
|.+|.+.+.|++.+ ++.+++||+++++++|++++++++++.+.. ...+...+.++++++++.+.+.++++++.
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~----~~~~t~~~pL~~v~~~~~~~~~~ed~~r~ 76 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSP----TYRGTSIVPLAFVLIVTAIKEAIEDIRRR 76 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCC----CCccHhHHhHHHHHHHHHHHHHHHHHHHH
Confidence 67899999999876 899999999999999999999999875432 11222333444555566777788887776
Q ss_pred HHHHHHHhcCCCcEEEEEC-CeEEEeeCCCCCCCcEEEecCCCccCCcEEEeeecC--CceEEecccccCCCcccccchh
Q 001877 113 KALEELRAYQADIATVLRN-GCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLS--NQLRVDQAILTGESCSVEKELD 189 (1001)
Q Consensus 113 ~~~~~l~~~~~~~~~v~R~-g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~~~~--g~~~Vdes~LtGEs~pv~k~~~ 189 (1001)
++-++ .+...++|+|+ |++++++|+||+|||+|+|++||+||||++++++++ |.++||||+|||||.|+.|.+.
T Consensus 77 ~~d~~---~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~ 153 (1057)
T TIGR01652 77 RRDKE---VNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQAL 153 (1057)
T ss_pred HhHHH---HhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecc
Confidence 66543 45678999997 899999999999999999999999999999998654 7899999999999999999864
Q ss_pred hhcc-------------------c----------------ccccCCCCceEEecceeec-ceEEEEEEEecccccchhHH
Q 001877 190 SIIA-------------------T----------------NAVYQDKTNILFSGTVVVA-GRARAVVVGVGANTAMGSIR 233 (1001)
Q Consensus 190 ~~~~-------------------~----------------~~~~~~~~n~l~~Gt~v~~-g~~~~~V~~tG~~T~~g~i~ 233 (1001)
+... + ...+.+.+|++++||.+.+ |.++|+|++||.+|++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~-- 231 (1057)
T TIGR01652 154 EETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMR-- 231 (1057)
T ss_pred hhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhh--
Confidence 3211 0 1123456799999999999 999999999999997754
Q ss_pred HHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC----CCC-------ccchHHHHHHHHHHHHHHHHh
Q 001877 234 DSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRD----PSH-------GGFLRGAIHYFKIAVALAVAA 302 (1001)
Q Consensus 234 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-------~~~~~~~~~~~~~~i~ll~~~ 302 (1001)
+...++.+.++++++++++..+++.+.+++|++++++...+... .++ ..+....+..+..++.++..+
T Consensus 232 -n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~ 310 (1057)
T TIGR01652 232 -NATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSL 310 (1057)
T ss_pred -cCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhh
Confidence 45566778899999999999988888888887777665433211 111 011223445677888999999
Q ss_pred cCCchHHHHHHHHHHhh------Hhhhhc----cccccccccccccCCeeEEEeCCCCccccCceEEEEEEEeccccCCC
Q 001877 303 IPEGLPAVVTTCLALGT------KRMARL----NAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGP 372 (1001)
Q Consensus 303 iP~~L~~~~~~~~~~~~------~~l~~~----~i~~k~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~ 372 (1001)
+|++||+++++++..++ .+|.++ ++.+|+.+++|+||+|++||+|||||||+|+|+++++++.+..+...
T Consensus 311 IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~ 390 (1057)
T TIGR01652 311 IPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDG 390 (1057)
T ss_pred cceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCC
Confidence 99999999999999999 777764 49999999999999999999999999999999999999876544321
Q ss_pred ceeeee--ecCcc-cCC-------CC--ccccCCCcc-c--cCCCChHHHHHHHHHhcccccccccccCCC--Ccceecc
Q 001877 373 IIAEYG--VTGTT-YAP-------EG--VVFDSSGIQ-L--EFPAQLPCLLHIARCSALCNESVLQYNPDK--GNYEKIG 435 (1001)
Q Consensus 373 ~~~~~~--~~~~~-~~~-------~~--~~~~~~~~~-~--~~~~~~~~~~~~~~~~~lc~~~~~~~~~~~--~~~~~~~ 435 (1001)
...... .+... +.+ +. ..+.+.... . ......+.+.+++.++++||++.+..+.+. ...+..+
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~ 470 (1057)
T TIGR01652 391 FTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAA 470 (1057)
T ss_pred cchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEcc
Confidence 000000 00000 000 00 000000000 0 001123456778899999999877642221 1345679
Q ss_pred CchHHHHHHHHHHcCCCCCCCcchhhhhhhhcccccccCccccccccEEEEecCCCCCceEEEEEeeC-CeEEEEEeCCh
Q 001877 436 EATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHK-QMCVMFSKGAP 514 (1001)
Q Consensus 436 ~~~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~-~~~~l~~KGa~ 514 (1001)
+|+|.||+++|+..|+.+..++++.+..... ......+|++++.+||+|+||||||+++++ +++++|+||||
T Consensus 471 sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~-------~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~ 543 (1057)
T TIGR01652 471 SPDEAALVKAARDVGFVFFERTPKSISLLIE-------MHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGAD 543 (1057)
T ss_pred CCcHHHHHHHHHHCCCEEEEecCCceEEEEE-------eCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcH
Confidence 9999999999999998876665442221110 011235799999999999999999999986 46899999999
Q ss_pred hHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCccccc---------------------C
Q 001877 515 ESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQT---------------------L 573 (1001)
Q Consensus 515 e~i~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~l~~~~~~---------------------~ 573 (1001)
|.|+++|+.. +++.++++.+.+++++. +|+||+++|||+++.++.. .
T Consensus 544 e~il~~~~~~-----------~~~~~~~~~~~~~~~a~-~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~ 611 (1057)
T TIGR01652 544 TVIFKRLSSG-----------GNQVNEETKEHLENYAS-EGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDV 611 (1057)
T ss_pred HHHHHHhhcc-----------chhHHHHHHHHHHHHHH-cCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 9999999641 13456778889999998 9999999999999754210 0
Q ss_pred c-cccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCccccc--------------
Q 001877 574 S-YDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDF-------------- 638 (1001)
Q Consensus 574 ~-~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~-------------- 638 (1001)
. .++|+|++|+|+++++|++|++++++|+.|++|||++||+|||+.+||.++|++||+.......
T Consensus 612 ~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~ 691 (1057)
T TIGR01652 612 VAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSV 691 (1057)
T ss_pred HHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHH
Confidence 0 1268999999999999999999999999999999999999999999999999999998654210
Q ss_pred -----------------------ccccccchhhccCChHH----HHHhhc--cceEEEEeChhhHHHHHHHHhcc-CCEE
Q 001877 639 -----------------------VGRSYTASEFEELPAMQ----QTVALQ--HMALFTRVEPSHKRMLVEALQNQ-NEVV 688 (1001)
Q Consensus 639 -----------------------~~~~~~~~~~~~~~~~~----~~~~~~--~~~v~~r~~p~~K~~~v~~l~~~-~~~v 688 (1001)
...+++|++++.+.+++ ...... +..||||++|+||.++|+.+|+. |++|
T Consensus 692 ~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~v 771 (1057)
T TIGR01652 692 EAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTT 771 (1057)
T ss_pred HHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeE
Confidence 01366777766443332 222333 44699999999999999999998 9999
Q ss_pred EEEeCCccCHHHHhcCCceEEe-cCccHHHHhhcCeeecCCCchHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001877 689 AMTGDGVNDAPALKKADIGIAM-GSGTAVAKSASDMVLADDNFATIVAAV-AEGRAIYNNTKQFIRYMISSNIGEVVCIF 766 (1001)
Q Consensus 689 ~~iGDg~ND~~~l~~A~vgIam-~~~~~~~~~~ad~v~~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~~~~ni~~~~~~~ 766 (1001)
+|+|||+||++||++|||||++ |.+..+|+++||+++.+ +..+..++ .|||++|.|+++.+.|.+++|++.+++++
T Consensus 772 l~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~ 849 (1057)
T TIGR01652 772 LAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQF 849 (1057)
T ss_pred EEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999997 45555799999999986 77788776 89999999999999999999999999999
Q ss_pred HHHHhcCC---CChhHHHHHHHHHHHhhhhhhhhcccCCC--ccccccCCC----CCCCCccchHHHHHHHHHHHHHHHH
Q 001877 767 VAAVLGIP---DTLAPVQLLWVNLVTDGLPATAIGFNKQD--SDVMKAKPR----KVSEAVVTGWLFFRYLVIGAYVGVA 837 (1001)
Q Consensus 767 ~~~~~~~~---~~~~~~~~l~~~~~~~~~p~~~l~~~~~~--~~~~~~~P~----~~~~~~~~~~~~~~~~~~~~~~~~~ 837 (1001)
++.+++.+ +++++++++|+|+++|++|++++|.++.+ +++|.++|+ .++++.++.+.|+.|++.|++++++
T Consensus 850 ~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~i 929 (1057)
T TIGR01652 850 WYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLV 929 (1057)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHH
Confidence 98887544 37889999999999999999999886444 789999997 4567889999999999999999887
Q ss_pred HHHHHHHHHHhhCCCCCCccccccccccCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHHHHhcccCccccccCCCcc
Q 001877 838 TVAGFIWWYVYSNEGPKLPYSELMNFDSCSTRETTHPCSIFEDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPWSN 917 (1001)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ti~f~~lv~~~~~~~~~~~~~~~s~~~~~~~~n 917 (1001)
++++.++.+..... . .+ +. .. ......++.|+++++...+..+.. ...| +
T Consensus 930 i~~~~~~~~~~~~~--~---~~----g~--------~~---~~~~~~~~~~~~~~~~~~~~~~~~---------~~~w-t 979 (1057)
T TIGR01652 930 IFFFPMFAYILGDF--V---SS----GS--------LD---DFSSVGVIVFTALVVIVNLKIALE---------INRW-N 979 (1057)
T ss_pred HHHHHHHHHcCCcc--c---cC----Cc--------cc---chhhHHHHHHHHHHHHHHHHHHHH---------HhHh-H
Confidence 66443333221110 0 00 00 00 001124555666655554433221 1223 2
Q ss_pred hHHHHHHHHHHHHHHHHHh----ccccc---ccccccccCchhHHHHHHHHHHHHHHHHHHHHHHhhcccchhhh
Q 001877 918 LWLVASIILTMFLHILILY----VPPLS---VLFSVTPLSWADWTAVFYLSFPVIIIDEVLKFFSRKSSGMRFKF 985 (1001)
Q Consensus 918 ~~l~~~i~~~~~l~~~i~~----~p~~~---~~f~~~~l~~~~w~~~~~~~~~~l~~~e~~K~~~r~~~~~~~~~ 985 (1001)
|+.++++++++++.+++.+ .+... ..+....-++.+|+.+++..++.++++.++|++.+.+.|..++.
T Consensus 980 ~~~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~f~l~~ll~~~~~l~p~~~~~~~~~~~~P~~~~~ 1054 (1057)
T TIGR01652 980 WISLITIWGSILVWLIFVIVYSSIFPSPAFYKAAPRVMGTFGFWLVLLVIVLISLLPRFTYKAIQRLFRPPDYDI 1054 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 3333344444444333221 11111 11222334688999999999999999999999999999988876
No 16
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=2.6e-107 Score=1006.68 Aligned_cols=886 Identities=19% Similarity=0.200 Sum_probs=650.2
Q ss_pred hcCCCCCCCCcCcc---HHHHHHHHhcchHHHHHHHHHHHHHHHHHhcCCCCcccchhhHHHHHHHhhHHHHHHHHHHHH
Q 001877 35 IYGKNVLPQEKRTA---FWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNA 111 (1001)
Q Consensus 35 ~~G~N~i~~~~~~~---~~~~l~~~f~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~ 111 (1001)
+|..|.+.+.|++. +++.+++||+++.+++|++++++++++.+... ..+...+.+++++++..+.+.+.+++.
T Consensus 86 ~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~----~~~t~~~PL~~vl~v~~ike~~Ed~~r 161 (1178)
T PLN03190 86 EFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVF----GRGASILPLAFVLLVTAVKDAYEDWRR 161 (1178)
T ss_pred cCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccC----CcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 58899999999875 78889999999999999999999998754421 123333444444555555555555555
Q ss_pred HHHHHHHHhcCCCcEEEEECCeEEEeeCCCCCCCcEEEecCCCccCCcEEEeeecC--CceEEecccccCCCcccccchh
Q 001877 112 EKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLS--NQLRVDQAILTGESCSVEKELD 189 (1001)
Q Consensus 112 ~~~~~~l~~~~~~~~~v~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~~~~--g~~~Vdes~LtGEs~pv~k~~~ 189 (1001)
.++-++ .++..++|+|+|++++++|++|+|||+|++++||++|||++++++++ |.|+||||+|||||.|+.|.+.
T Consensus 162 ~k~d~~---~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~ 238 (1178)
T PLN03190 162 HRSDRI---ENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAK 238 (1178)
T ss_pred HHhHHh---hcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEeccc
Confidence 444333 34568999999999999999999999999999999999999997653 8899999999999999999865
Q ss_pred hhcc-----------------c---------------ccccCCCCceEEecceeecc-eEEEEEEEecccccchhHHHHh
Q 001877 190 SIIA-----------------T---------------NAVYQDKTNILFSGTVVVAG-RARAVVVGVGANTAMGSIRDSM 236 (1001)
Q Consensus 190 ~~~~-----------------~---------------~~~~~~~~n~l~~Gt~v~~g-~~~~~V~~tG~~T~~g~i~~~~ 236 (1001)
+... + .....+.+|++++||.+.+. .++|+|++||.+|+ ++.+.
T Consensus 239 ~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK---~~~N~ 315 (1178)
T PLN03190 239 QETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETK---AMLNN 315 (1178)
T ss_pred chhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhh---HhhcC
Confidence 3211 0 01123457899999999986 69999999999996 45555
Q ss_pred ccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc----CCCCc-------------------cchHHHHHHHH
Q 001877 237 LQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFR----DPSHG-------------------GFLRGAIHYFK 293 (1001)
Q Consensus 237 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-------------------~~~~~~~~~~~ 293 (1001)
..++.+.++++++++++..+++.+.+++|+++.++...+.. +.++. ++....+..|.
T Consensus 316 ~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 395 (1178)
T PLN03190 316 SGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFL 395 (1178)
T ss_pred CCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHH
Confidence 56667899999999999999888888887776655422211 00000 00011233445
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHhhHhhhhcc----------ccccccccccccCCeeEEEeCCCCccccCceEEEEEE
Q 001877 294 IAVALAVAAIPEGLPAVVTTCLALGTKRMARLN----------AIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKIC 363 (1001)
Q Consensus 294 ~~i~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~----------i~~k~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~ 363 (1001)
.++.++..++|++|++++++++..++.++.++. +.+|+.+.+|+||+|++||+|||||||+|+|++++|+
T Consensus 396 ~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~ 475 (1178)
T PLN03190 396 MSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCAS 475 (1178)
T ss_pred HHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEE
Confidence 556778899999999999999999898887654 7899999999999999999999999999999999999
Q ss_pred EeccccCCCcee------ee--eecCcccCCCCccccCCCc-----cccCCCChHHHHHHHHHhcccccccccccCC--C
Q 001877 364 VVHSVQQGPIIA------EY--GVTGTTYAPEGVVFDSSGI-----QLEFPAQLPCLLHIARCSALCNESVLQYNPD--K 428 (1001)
Q Consensus 364 ~~~~~~~~~~~~------~~--~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~lc~~~~~~~~~~--~ 428 (1001)
+.+..+...... .+ ...+..+.+......+... ........+.+.+++.++++||++.+....+ +
T Consensus 476 i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~ 555 (1178)
T PLN03190 476 IWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSD 555 (1178)
T ss_pred ECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCC
Confidence 876544321000 00 0111111111110000000 0000011234678999999999987642111 1
Q ss_pred ----CcceeccCchHHHHHHHHHHcCCCCCCCcchhhhhhhhcccccccCccccccccEEEEecCCCCCceEEEEEeeC-
Q 001877 429 ----GNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHK- 503 (1001)
Q Consensus 429 ----~~~~~~~~~~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~- 503 (1001)
...+..++|+|.||+++|++.|+.+..|+++.+..... ..+.+|++++++||+|+||||||+++++
T Consensus 556 ~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~---------~~~~~~~il~~~pF~S~rKrMSvIv~~~~ 626 (1178)
T PLN03190 556 PTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIH---------GERQRFNVLGLHEFDSDRKRMSVILGCPD 626 (1178)
T ss_pred ccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeec---------cceecceeEEEecccccccEEEEEEEcCC
Confidence 12366679999999999999999998888776544222 2346799999999999999999999975
Q ss_pred CeEEEEEeCChhHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCccccc-----------
Q 001877 504 QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQT----------- 572 (1001)
Q Consensus 504 ~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~l~~~~~~----------- 572 (1001)
+++.+|+|||||.|+++|+... +...++++.+++++|+. +|+|||++|||.++.++..
T Consensus 627 ~~~~l~~KGA~e~il~~~~~~~----------~~~~~~~~~~~l~~~a~-~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~ 695 (1178)
T PLN03190 627 KTVKVFVKGADTSMFSVIDRSL----------NMNVIRATEAHLHTYSS-LGLRTLVVGMRELNDSEFEQWHFSFEAAST 695 (1178)
T ss_pred CcEEEEEecCcHHHHHhhcccc----------cchhHHHHHHHHHHHHh-cCCceEEEEEEeCCHHHHhhHHHHHHHhhh
Confidence 5688999999999999997532 22346778889999998 9999999999999753211
Q ss_pred -----------CccccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCccccc---
Q 001877 573 -----------LSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDF--- 638 (1001)
Q Consensus 573 -----------~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~--- 638 (1001)
...++|+||+++|+++++|++|++++++|+.|+++||++||+|||+.+||.+||++||+.......
T Consensus 696 ~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i 775 (1178)
T PLN03190 696 ALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIII 775 (1178)
T ss_pred hhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEe
Confidence 011268999999999999999999999999999999999999999999999999999997654210
Q ss_pred ------------------------------------------ccccccchhhccCCh----HHHHHhhc--cceEEEEeC
Q 001877 639 ------------------------------------------VGRSYTASEFEELPA----MQQTVALQ--HMALFTRVE 670 (1001)
Q Consensus 639 ------------------------------------------~~~~~~~~~~~~~~~----~~~~~~~~--~~~v~~r~~ 670 (1001)
.+.+++|..+..+.+ +++..... +++||||++
T Consensus 776 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~s 855 (1178)
T PLN03190 776 NSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVA 855 (1178)
T ss_pred cCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCC
Confidence 014556666655543 22333333 445899999
Q ss_pred hhhHHHHHHHHhcc-CCEEEEEeCCccCHHHHhcCCceEEe-cCccHHHHhhcCeeecCCCchHHHHHHHHhHHHHHHHH
Q 001877 671 PSHKRMLVEALQNQ-NEVVAMTGDGVNDAPALKKADIGIAM-GSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTK 748 (1001)
Q Consensus 671 p~~K~~~v~~l~~~-~~~v~~iGDg~ND~~~l~~A~vgIam-~~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~ 748 (1001)
|.||+++|+.+|+. +++|+|+|||+||++|||+|||||++ |.++.+|+.+||+++.++++...+.++ |||+.|.|+.
T Consensus 856 P~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~Fr~L~rLLlv-HGr~~y~R~s 934 (1178)
T PLN03190 856 PLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLV-HGHWNYQRMG 934 (1178)
T ss_pred HHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhhhHHHHHHHHH-hCHHHHHHHH
Confidence 99999999999987 58999999999999999999999995 577779999999999999998888888 9999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCC---ChhHHHHHHHHHHHhhhhhhhhcccCCC--ccccccCCCCC----CCCcc
Q 001877 749 QFIRYMISSNIGEVVCIFVAAVLGIPD---TLAPVQLLWVNLVTDGLPATAIGFNKQD--SDVMKAKPRKV----SEAVV 819 (1001)
Q Consensus 749 ~~i~~~~~~ni~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~p~~~l~~~~~~--~~~~~~~P~~~----~~~~~ 819 (1001)
+.+.|.||+|++.+++++++.++..++ .+.++.+.+||+++|++|++++|.+++| ++.+.+.|..+ +...+
T Consensus 935 ~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~ 1014 (1178)
T PLN03190 935 YMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAY 1014 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCcc
Confidence 999999999999999999999887765 5668889999999999999999999988 57777888544 45678
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccccccccccCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHH
Q 001877 820 TGWLFFRYLVIGAYVGVATVAGFIWWYVYSNEGPKLPYSELMNFDSCSTRETTHPCSIFEDRHPSTVSMTVLVVVEMFNA 899 (1001)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ti~f~~lv~~~~~~~ 899 (1001)
+.+.|+.|++.|++++++++++.++.+ ... .. ++ ....++.+++.++...+..
T Consensus 1015 n~~~F~~w~~~~i~qs~iiff~~~~~~--~~~--~~---~~--------------------~~~~~~~~~~~v~~vnl~i 1067 (1178)
T PLN03190 1015 NSKLFWLTMIDTLWQSAVVFFVPLFAY--WAS--TI---DG--------------------SSIGDLWTLAVVILVNLHL 1067 (1178)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHh--cCC--Cc---Cc--------------------eeEhHhhhhHHHHHHHHHH
Confidence 888999999999999987665443322 110 00 00 0001122222222222221
Q ss_pred HHhcccCccccccCCCcchHH----HHHHHHHHHHHHHHHhccccccc--ccccccCchhHHHHHHHHHHHHHHHHHHHH
Q 001877 900 LNNLSENQSLLVIPPWSNLWL----VASIILTMFLHILILYVPPLSVL--FSVTPLSWADWTAVFYLSFPVIIIDEVLKF 973 (1001)
Q Consensus 900 ~~~~~~~~s~~~~~~~~n~~l----~~~i~~~~~l~~~i~~~p~~~~~--f~~~~l~~~~w~~~~~~~~~~l~~~e~~K~ 973 (1001)
. .....| +|+. ++++++.+++.++...+|..... +....-++.+|+.+++..++.++++.++|+
T Consensus 1068 ~---------~~~~~w-t~~~~~~i~~Si~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~fwl~ill~~~~~l~p~~~~~~ 1137 (1178)
T PLN03190 1068 A---------MDIIRW-NWITHAAIWGSIVATFICVIVIDAIPTLPGYWAIFHIAKTGSFWLCLLAIVVAALLPRFVVKV 1137 (1178)
T ss_pred H---------HHHhhh-hHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 111122 2222 23333333332222223322211 112223678999999999999999999999
Q ss_pred HHhhcccchhhhhhh
Q 001877 974 FSRKSSGMRFKFWFR 988 (1001)
Q Consensus 974 ~~r~~~~~~~~~~~~ 988 (1001)
+.|.++|..++...+
T Consensus 1138 ~~~~~~P~~~~~~~~ 1152 (1178)
T PLN03190 1138 LYQYFTPCDVQIARE 1152 (1178)
T ss_pred HHHHcCCCHHHHHHH
Confidence 999999999888654
No 17
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-98 Score=842.13 Aligned_cols=891 Identities=22% Similarity=0.289 Sum_probs=625.8
Q ss_pred CCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHhcchHHHHHHHHHHHHHHHHHhcCCCCcccchhhHHHHHHHhhH
Q 001877 21 TKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAAN 100 (1001)
Q Consensus 21 ~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~ 100 (1001)
..||+.+++.+|+..||+|.+..+. ++++.+++++--+|++.+..+... +|..+ .+++.+++|+++...+
T Consensus 158 ~~gL~~~~~~~r~~iyG~N~i~l~i-k~i~~iLv~EvL~PfYlFQ~fSv~----lW~~d-----~Y~~YA~cI~iisv~S 227 (1140)
T KOG0208|consen 158 SNGLERQEIIDRRIIYGRNVISLPI-KSISQILVKEVLNPFYLFQAFSVA----LWLAD-----SYYYYAFCIVIISVYS 227 (1140)
T ss_pred cCCccHHHHHhHHhhcCCceeeeec-ccHHHHHHHhccchHHHHHhHHhh----hhhcc-----cchhhhhHHHHHHHHH
Confidence 5799999999999999999999877 568999999999999887655444 43332 3556677888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcEEEEECCeEEEeeCCCCCCCcEEEecC-CCccCCcEEEeeecCCceEEecccccC
Q 001877 101 AAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNV-GCKIPADMRMIEMLSNQLRVDQAILTG 179 (1001)
Q Consensus 101 ~~~~~~~~~~~~~~~~~l~~~~~~~~~v~R~g~~~~i~~~~Lv~GDiI~l~~-G~~iPaD~~ll~~~~g~~~Vdes~LtG 179 (1001)
..+..++.++..+.++++-+.. ..|+|+|||.|++|.++|||||||+++.+ |-..|||++|+ +|+|.||||+|||
T Consensus 228 i~~sv~e~r~qs~rlr~mv~~~-~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li---~g~civNEsmLTG 303 (1140)
T KOG0208|consen 228 IVLSVYETRKQSIRLRSMVKFT-CPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLI---SGDCIVNESMLTG 303 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHhcCC-ceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEE---eCcEEeecccccC
Confidence 8999999988888888776543 46899999999999999999999999998 99999999999 6999999999999
Q ss_pred CCcccccchhhhcc------cccccCCCCceEEecceeec------ceEEEEEEEecccccchhHHHHhccCCCCCCchH
Q 001877 180 ESCSVEKELDSIIA------TNAVYQDKTNILFSGTVVVA------GRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLK 247 (1001)
Q Consensus 180 Es~pv~k~~~~~~~------~~~~~~~~~n~l~~Gt~v~~------g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~ 247 (1001)
||.|+.|.+.+... ......+.+|.+|+||.+++ +.+.++|++||.+|..|++.+++..++....++-
T Consensus 304 ESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~fkfy 383 (1140)
T KOG0208|consen 304 ESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPVNFKFY 383 (1140)
T ss_pred CcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCcccHHH
Confidence 99999999865211 12344567899999999986 5689999999999999999999999865555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhHhhhhccc
Q 001877 248 KKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNA 327 (1001)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~i 327 (1001)
+...+|...+..+.++ +++..++.+.... ......+..++.++...+|++||++++++..++..||.|+||
T Consensus 384 rds~~fi~~l~~ia~~-gfiy~~i~l~~~g--------~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~I 454 (1140)
T KOG0208|consen 384 RDSFKFILFLVIIALI-GFIYTAIVLNLLG--------VPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGI 454 (1140)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHhHhHHHcC--------CCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCe
Confidence 5444443333322211 1111111111111 122345677888999999999999999999999999999999
Q ss_pred cccccccccccCCeeEEEeCCCCccccCceEEEEEEEeccc-cCCCceeeeeecCcccCCCCccccCCCccccCCCChHH
Q 001877 328 IVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSV-QQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPC 406 (1001)
Q Consensus 328 ~~k~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (1001)
+|.++..+...|++|++|||||||||++.+.+..+....+. ...+...... ......+. +.........
T Consensus 455 fCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~------~~~~~~~~----~l~~~~~~~~ 524 (1140)
T KOG0208|consen 455 FCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVT------EDSLQLFY----KLSLRSSSLP 524 (1140)
T ss_pred EEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhh------hhhcccee----eccccccCCc
Confidence 99999999999999999999999999999999998875322 1110000000 00000000 0000001112
Q ss_pred HHHHHHHhcccccccccccCCCCcceeccCchHHHHHHHHHHcCCCCCCC------cchh--hh--hhhhcccc-cccCc
Q 001877 407 LLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDS------MPSA--LN--MLSKHERA-SYCNH 475 (1001)
Q Consensus 407 ~~~~~~~~~lc~~~~~~~~~~~~~~~~~~~~~e~al~~~a~~~g~~~~~~------~~~~--~~--~~~~~~~~-~~~~~ 475 (1001)
...+..+++.||...... ....|||.|.-+.+. .|+...+. +..+ +. ...+.... ....+
T Consensus 525 ~~~~~~a~atCHSL~~v~------g~l~GDPLdlkmfe~---t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~ 595 (1140)
T KOG0208|consen 525 MGNLVAAMATCHSLTLVD------GTLVGDPLDLKMFES---TGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTE 595 (1140)
T ss_pred hHHHHHHHhhhceeEEeC------CeeccCceeeeeeec---cceEEEeccccchhhhhhCCccCCEeCCCcccccCCCc
Confidence 346777888899544321 124577777655542 23332110 0000 00 01111110 01111
Q ss_pred cccccccEEEEecCCCCCceEEEEEeeC--CeEEEEEeCChhHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhh
Q 001877 476 HWEIEFKKVSILEFSRDRKMMSVLCSHK--QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGK 553 (1001)
Q Consensus 476 ~~~~~~~~l~~~~F~s~~k~msviv~~~--~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (1001)
.-++.+.+++.+||+|..+|||||++++ ++..+|+|||||.|.+.|++...+ ..+.+.+++|+.
T Consensus 596 ~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~tvP-------------~dy~evl~~Yt~- 661 (1140)
T KOG0208|consen 596 CGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPETVP-------------ADYQEVLKEYTH- 661 (1140)
T ss_pred CCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcccCC-------------ccHHHHHHHHHh-
Confidence 1233789999999999999999999987 578999999999999999764322 347788899998
Q ss_pred hhhHHHHHHhccCCccc----ccCccc-cCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHH
Q 001877 554 EALRCLALALKQMPINR----QTLSYD-DEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHK 628 (1001)
Q Consensus 554 ~g~r~l~~a~k~l~~~~----~~~~~~-~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~ 628 (1001)
+|+|++|+|+|+++... +...++ .|.|++|+|++.+|+++|++++.+|++|++|.||++|+||||..||..+||+
T Consensus 662 ~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVake 741 (1140)
T KOG0208|consen 662 QGFRVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKE 741 (1140)
T ss_pred CCeEEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhc
Confidence 99999999999998651 234455 8999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCcccccc---------------------------------------------------cccccchhhccC---ChH
Q 001877 629 IGAFDHLVDFV---------------------------------------------------GRSYTASEFEEL---PAM 654 (1001)
Q Consensus 629 ~gi~~~~~~~~---------------------------------------------------~~~~~~~~~~~~---~~~ 654 (1001)
||+..+..... ...++|+.+.-+ ..+
T Consensus 742 Cgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~ 821 (1140)
T KOG0208|consen 742 CGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPE 821 (1140)
T ss_pred ccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHH
Confidence 99987542200 011223322221 234
Q ss_pred HHHHhhccceEEEEeChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEEecCccHHHHhhcCeeecCCCchHHH
Q 001877 655 QQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIV 734 (1001)
Q Consensus 655 ~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~~ad~v~~~~~~~~i~ 734 (1001)
.+..++.+..|||||+|+||.++|+.+|+.|..|+|||||+|||.|||+||+||+++. .+|.-||.+...-.+..+++
T Consensus 822 l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSe--aEASvAApFTSk~~~I~cVp 899 (1140)
T KOG0208|consen 822 LVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSE--AEASVAAPFTSKTPSISCVP 899 (1140)
T ss_pred HHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhh--hhHhhcCccccCCCchhhHh
Confidence 4556677889999999999999999999999999999999999999999999999963 45666799999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHhhhhhhhhcccCCCccccccCCCCC
Q 001877 735 AAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMKAKPRKV 814 (1001)
Q Consensus 735 ~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~P~~~ 814 (1001)
+.|+|||+++.....+++|+..+.+..++..++ ++.....+++.|.++++++...+.+++|+.+++..++-..+|
T Consensus 900 ~vIrEGRaALVTSf~~FkYMalYs~iqFisv~~--LY~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP--- 974 (1140)
T KOG0208|consen 900 DVIREGRAALVTSFACFKYMALYSAIQFISVVF--LYLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRP--- 974 (1140)
T ss_pred HHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhhe--eeeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCC---
Confidence 999999999999999999999998776554333 344556899999999999999999999999999988876666
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccccccccccCCCCCCCCCCCccCCCcchhhHHHHHHHH
Q 001877 815 SEAVVTGWLFFRYLVIGAYVGVATVAGFIWWYVYSNEGPKLPYSELMNFDSCSTRETTHPCSIFEDRHPSTVSMTVLVVV 894 (1001)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ti~f~~lv~~ 894 (1001)
...+++++.+...+.+-++..+..+..+ +... ...|....++.- .+++. ....|..|.+-.+.
T Consensus 975 ~~~L~s~~~~~~l~~q~vli~l~q~i~~---l~~~----~qpw~~pp~~~~-----~~nt~-----s~~~T~lF~vS~fq 1037 (1140)
T KOG0208|consen 975 PTNLLSKKILVPLLLQIVLICLVQWILT---LIVE----PQPWYEPPNPQV-----DDNTQ-----SSDNTSLFFVSSFQ 1037 (1140)
T ss_pred CccccccchhhhhHHHHHHHHHHHHhhh---eeec----cccceecCCCCc-----Ccccc-----cceeeEeeehhHHH
Confidence 3467777665555444333322222111 1111 122322221110 01110 11123334333333
Q ss_pred HHHHHHHhcccCccccccCCCcchHHHHHHHHHHHHHHHHHhccccc---ccccccccCchhHHHHHHH-HHHHHHHHHH
Q 001877 895 EMFNALNNLSENQSLLVIPPWSNLWLVASIILTMFLHILILYVPPLS---VLFSVTPLSWADWTAVFYL-SFPVIIIDEV 970 (1001)
Q Consensus 895 ~~~~~~~~~~~~~s~~~~~~~~n~~l~~~i~~~~~l~~~i~~~p~~~---~~f~~~~l~~~~w~~~~~~-~~~~l~~~e~ 970 (1001)
.+++++.. ...++|+.+.|+|+.+...+....+..+.+...+... ..++.++.+-...-+.+++ .+..+....+
T Consensus 1038 Yi~~a~v~--S~g~pfr~pl~~n~~f~~~i~~i~~~~i~l~~~~~~~~~~~l~~~t~~~~~~~~fii~~~~~~~~~~~~~ 1115 (1140)
T KOG0208|consen 1038 YIFIALVL--SKGSPFRRPLWKNVLFKVFITVIILSTIYLLFVNYLFIEWKLLQLTYIPTTFDRFIILLVVISYFALNYI 1115 (1140)
T ss_pred HHHhheee--ccCCcccCchhcCceeeeehhhHHhhhhhhhhccccchhhhhhceeccCcchhHHHHHHHHHHHHHHHHh
Confidence 34444332 2468999999999988766655555555555444322 3466777766444333333 3333444444
Q ss_pred HHHHHhhcccchhhhhhhccccC
Q 001877 971 LKFFSRKSSGMRFKFWFRRHDIL 993 (1001)
Q Consensus 971 ~K~~~r~~~~~~~~~~~~~~~~~ 993 (1001)
.+-..+.....-.++.+.|.+.+
T Consensus 1116 ~~~~~~~~~~~~~~~l~~r~~~~ 1138 (1140)
T KOG0208|consen 1116 QPSVGRMLGDKSMRDLVPRKKSE 1138 (1140)
T ss_pred hhhhhchhhhHHHHHhccccccC
Confidence 44444444444444444444443
No 18
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=9.9e-99 Score=893.40 Aligned_cols=895 Identities=20% Similarity=0.231 Sum_probs=663.9
Q ss_pred HHhhcCCCCCCCCcCcc---HHHHHHHHhcchHHHHHHHHHHHHHHHHHhcCCCCcccchhhHHHHHHHhhHHHHHHHHH
Q 001877 32 HVRIYGKNVLPQEKRTA---FWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITE 108 (1001)
Q Consensus 32 r~~~~G~N~i~~~~~~~---~~~~l~~~f~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~ 108 (1001)
+...|-.|.+.+.|++. +++.+++||+++.|++|++++++++++ +. +...+...+.+++++.++.+.+.+.+
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~----~~~~~~~~~pl~~vl~~t~iKd~~eD 102 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LS----PFNPYTTLVPLLFVLGITAIKDAIED 102 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-cc----ccCccceeeceeeeehHHHHHHHHhh
Confidence 55689999999999876 889999999999999999999999988 32 23445555556666666665555555
Q ss_pred HHHHHHHHHHHhcCCCcEEEEECCe-EEEeeCCCCCCCcEEEecCCCccCCcEEEeeec--CCceEEecccccCCCcccc
Q 001877 109 TNAEKALEELRAYQADIATVLRNGC-FSILPAAELVPGDIVEVNVGCKIPADMRMIEML--SNQLRVDQAILTGESCSVE 185 (1001)
Q Consensus 109 ~~~~~~~~~l~~~~~~~~~v~R~g~-~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~~~--~g~~~Vdes~LtGEs~pv~ 185 (1001)
+|+.+.=. +.+..++.|.|++. +++..|++|++||+|.+..+|.+|||.++++++ +|.|+|++++|+||++.+.
T Consensus 103 ~rR~~~D~---~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~ 179 (1151)
T KOG0206|consen 103 YRRHKQDK---EVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKV 179 (1151)
T ss_pred hhhhhccH---HhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccce
Confidence 54443222 23444688888644 899999999999999999999999999999765 6889999999999999988
Q ss_pred cchhhhccc---------------------------------ccc-cCCCCceEEecceeecce-EEEEEEEecccccch
Q 001877 186 KELDSIIAT---------------------------------NAV-YQDKTNILFSGTVVVAGR-ARAVVVGVGANTAMG 230 (1001)
Q Consensus 186 k~~~~~~~~---------------------------------~~~-~~~~~n~l~~Gt~v~~g~-~~~~V~~tG~~T~~g 230 (1001)
|...+.... ... +....+++++|+.+.+.. +.|+|+.||++|++
T Consensus 180 k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~- 258 (1151)
T KOG0206|consen 180 KQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKL- 258 (1151)
T ss_pred eeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchH-
Confidence 865322111 001 445678999999999865 89999999999965
Q ss_pred hHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-------CCCcc---chHHHHHHHHHHHHHHH
Q 001877 231 SIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRD-------PSHGG---FLRGAIHYFKIAVALAV 300 (1001)
Q Consensus 231 ~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~---~~~~~~~~~~~~i~ll~ 300 (1001)
.++...++.+++++++.++.....+..+.+.+|++..+....+... .++.. ........|..++.++.
T Consensus 259 --~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~ 336 (1151)
T KOG0206|consen 259 --MQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQ 336 (1151)
T ss_pred --HHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhh
Confidence 4555668889999999999998888888777777766554443321 11101 11234556777888999
Q ss_pred HhcCCchHHHHHHHHHHhhHhhh----------hccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEeccccC
Q 001877 301 AAIPEGLPAVVTTCLALGTKRMA----------RLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQ 370 (1001)
Q Consensus 301 ~~iP~~L~~~~~~~~~~~~~~l~----------~~~i~~k~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~ 370 (1001)
.++|.+|++++++....++..+. ...+.+|+.+..|+||+|++|++|||||||+|.|++.+|.+.+..+.
T Consensus 337 ~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg 416 (1151)
T KOG0206|consen 337 YLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYG 416 (1151)
T ss_pred ceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccc
Confidence 99999999999999999986653 35688999999999999999999999999999999999999887664
Q ss_pred CCceeeeeecCcc-------cCCCCccccCCCccccC---CCChHHHHHHHHHhcccccccccccCCC-CcceeccCchH
Q 001877 371 GPIIAEYGVTGTT-------YAPEGVVFDSSGIQLEF---PAQLPCLLHIARCSALCNESVLQYNPDK-GNYEKIGEATE 439 (1001)
Q Consensus 371 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~lc~~~~~~~~~~~-~~~~~~~~~~e 439 (1001)
............. ...++..+.+....... ....+...++..++++||+..++.+++. ...|...+|+|
T Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE 496 (1151)
T KOG0206|consen 417 RNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDE 496 (1151)
T ss_pred cCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcH
Confidence 3211100000000 00111122221111100 1255667789999999999988774343 45788899999
Q ss_pred HHHHHHHHHcCCCCCCCcchhhhhhhhcccccccCccccccccEEEEecCCCCCceEEEEEeeCC-eEEEEEeCChhHHH
Q 001877 440 VALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHKQ-MCVMFSKGAPESVL 518 (1001)
Q Consensus 440 ~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~~-~~~l~~KGa~e~i~ 518 (1001)
.|++..|++.|+.+..|+++.+.....+ .+..|++++++||+|.|||||||||+++ +..+|||||+..|+
T Consensus 497 ~AlV~aAr~~gf~f~~Rt~~~vti~~~g---------~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~ 567 (1151)
T KOG0206|consen 497 AALVEAARELGFVFLGRTPDSVTIRELG---------VEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIF 567 (1151)
T ss_pred HHHHHHHHhcCceeeeccCceEEEeccc---------cceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhH
Confidence 9999999999999999988877664221 3568999999999999999999999974 99999999999999
Q ss_pred HhhhhccccCCCccccCCHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCcccc---------------------cCccc-
Q 001877 519 SRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQ---------------------TLSYD- 576 (1001)
Q Consensus 519 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~l~~~~~---------------------~~~~~- 576 (1001)
++++. .....+++..+++++||. +|+||||+|||.+++++- ...++
T Consensus 568 erL~~-----------~~~~~~e~T~~Hl~~yA~-eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~ 635 (1151)
T KOG0206|consen 568 ERLSK-----------NGEKLREKTQEHLEEYAT-EGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEE 635 (1151)
T ss_pred hhhhh-----------cchHHHHHHHHHHHHHHh-hhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHH
Confidence 99974 124567778899999999 999999999999996541 01122
Q ss_pred cCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCccccc------------------
Q 001877 577 DEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDF------------------ 638 (1001)
Q Consensus 577 ~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~------------------ 638 (1001)
+|+||+++|.+++||+++++++++|+.|++||||+||+|||+.+||.+|+..|++.......
T Consensus 636 iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~ 715 (1151)
T KOG0206|consen 636 IEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATA 715 (1151)
T ss_pred HHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHH
Confidence 69999999999999999999999999999999999999999999999999999998764320
Q ss_pred -------------------------ccccccchhhccCChHHHH------HhhccceEEEEeChhhHHHHHHHHhcc-CC
Q 001877 639 -------------------------VGRSYTASEFEELPAMQQT------VALQHMALFTRVEPSHKRMLVEALQNQ-NE 686 (1001)
Q Consensus 639 -------------------------~~~~~~~~~~~~~~~~~~~------~~~~~~~v~~r~~p~~K~~~v~~l~~~-~~ 686 (1001)
.+.+++|+.+....+.+.. ..-.+.+++||++|.||+.+|+..++. +.
T Consensus 716 ~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~ 795 (1151)
T KOG0206|consen 716 ALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKA 795 (1151)
T ss_pred HHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCc
Confidence 1233344443322222111 122367899999999999999999754 88
Q ss_pred EEEEEeCCccCHHHHhcCCceEEec-CccHHHHhhcCeeecCCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001877 687 VVAMTGDGVNDAPALKKADIGIAMG-SGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCI 765 (1001)
Q Consensus 687 ~v~~iGDg~ND~~~l~~A~vgIam~-~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~ 765 (1001)
.+++||||+||++|+++|||||+++ .++.+|..+||+.+..+.+...+.++ |||+.|.|+.+++.|.||+|+...+.+
T Consensus 796 ~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLLLV-HGhW~Y~R~a~~ilyfFYKNi~f~~~~ 874 (1151)
T KOG0206|consen 796 VTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLLLV-HGHWSYIRLAKMILYFFYKNIAFTFTL 874 (1151)
T ss_pred eEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhhee-ecceeHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999975 89999999999999999999999998 999999999999999999999999999
Q ss_pred HHHHHhcCCC---ChhHHHHHHHHHHHhhhhhhhhcccCCC--ccccccCCCCCC----CCccchHHHHHHHHHHHHHHH
Q 001877 766 FVAAVLGIPD---TLAPVQLLWVNLVTDGLPATAIGFNKQD--SDVMKAKPRKVS----EAVVTGWLFFRYLVIGAYVGV 836 (1001)
Q Consensus 766 ~~~~~~~~~~---~~~~~~~l~~~~~~~~~p~~~l~~~~~~--~~~~~~~P~~~~----~~~~~~~~~~~~~~~~~~~~~ 836 (1001)
+++.++..++ .+.++++.++|++++++|++.+|.+++| +..+.+.|..++ ...++.+.|+.|++.|.++++
T Consensus 875 fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sl 954 (1151)
T KOG0206|consen 875 FWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSL 954 (1151)
T ss_pred HHhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhhe
Confidence 9999886554 7889999999999999999999999988 577778886553 346677889999999999988
Q ss_pred HHHHHHHHHHHhhCCCCCCccccccccccCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHHHHhcccCccccccCCC-
Q 001877 837 ATVAGFIWWYVYSNEGPKLPYSELMNFDSCSTRETTHPCSIFEDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPW- 915 (1001)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ti~f~~lv~~~~~~~~~~~~~~~s~~~~~~~- 915 (1001)
+++++.+..+..... ..+......|. | .+.+|+.+|+.-.+ +-.+....|
T Consensus 955 i~Ff~~~~~~~~~~~--~~~G~~~d~~~-------------~-----G~~~~T~~Vivv~~---------~iaL~~~ywT 1005 (1151)
T KOG0206|consen 955 VIFFLPYLVFEEQAV--TSNGLTADYWT-------------L-----GTTVFTIIVIVVNL---------KIALETSYWT 1005 (1151)
T ss_pred eeeeeeHhhheeeee--ccCCCcCChhh-------------c-----cceEEEEEEEEEEe---------eeeeeehhee
Confidence 776544333311000 00000000000 0 01111111110000 011111222
Q ss_pred --cchHHHHHHHHHHHHHHHHHh-ccccc------ccccccccCchhHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhh
Q 001877 916 --SNLWLVASIILTMFLHILILY-VPPLS------VLFSVTPLSWADWTAVFYLSFPVIIIDEVLKFFSRKSSGMRFKFW 986 (1001)
Q Consensus 916 --~n~~l~~~i~~~~~l~~~i~~-~p~~~------~~f~~~~l~~~~w~~~~~~~~~~l~~~e~~K~~~r~~~~~~~~~~ 986 (1001)
.....|+++++.+++.+++.- .|.+. ..+.....++.+|+.+++..+.+++|+.++|.+.+.++|...++.
T Consensus 1006 ~i~~i~i~gSi~~~f~f~~iy~~~~~~~~~~~~~~~~~~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~~~i 1085 (1151)
T KOG0206|consen 1006 WINHIVIWGSILLWFVFLFIYSELTPAISTPDPFYGVAEHLLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDHDII 1085 (1151)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccCCCccHHHHHHHHhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHHHHH
Confidence 112223333333333222211 12111 223333457889999999999999999999999999999998875
Q ss_pred hh
Q 001877 987 FR 988 (1001)
Q Consensus 987 ~~ 988 (1001)
.+
T Consensus 1086 ~~ 1087 (1151)
T KOG0206|consen 1086 QE 1087 (1151)
T ss_pred HH
Confidence 44
No 19
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-95 Score=785.76 Aligned_cols=862 Identities=20% Similarity=0.240 Sum_probs=646.7
Q ss_pred HHHhhcCCCCCCCCcCcc---HHHHHHHHhcchHHHHHHHHHHHHHHHHHhcCCCCcccchhhHHHHH-HHhhHHHHHHH
Q 001877 31 RHVRIYGKNVLPQEKRTA---FWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILL-ILAANAAVGVI 106 (1001)
Q Consensus 31 ~r~~~~G~N~i~~~~~~~---~~~~l~~~f~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~~~ii~-~~~~~~~~~~~ 106 (1001)
.++++|.+|.+...|++. ++..+++||+-.++.+++..+.-++++.+.-+. +..|+.++..++ +.++...++.+
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~--l~ty~~pl~fvl~itl~keavdd~ 151 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGY--LSTYWGPLGFVLTITLIKEAVDDL 151 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecc--hhhhhHHHHHHHHHHHHHHHHHHH
Confidence 566778899998887754 678899999999999999999988887654322 334444444333 33333333333
Q ss_pred HHHHHHHHHHHHHhcCCCcEE-EEECCeEEEeeCCCCCCCcEEEecCCCccCCcEEEeeec--CCceEEecccccCCCcc
Q 001877 107 TETNAEKALEELRAYQADIAT-VLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEML--SNQLRVDQAILTGESCS 183 (1001)
Q Consensus 107 ~~~~~~~~~~~l~~~~~~~~~-v~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~~~--~g~~~Vdes~LtGEs~p 183 (1001)
.+++..+ ..+....+ .-|+|...+ +++++++||+|+++++++||||++++.++ +|.|++.+..|+||+.-
T Consensus 152 ~r~~rd~------~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDW 224 (1051)
T KOG0210|consen 152 KRRRRDR------ELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDW 224 (1051)
T ss_pred HHHHhhh------hhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCcccc
Confidence 3322221 11222333 446776555 99999999999999999999999999866 78999999999999976
Q ss_pred cccchhhhccc----------------------------------ccccCCCCceEEecceeecceEEEEEEEecccccc
Q 001877 184 VEKELDSIIAT----------------------------------NAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAM 229 (1001)
Q Consensus 184 v~k~~~~~~~~----------------------------------~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~ 229 (1001)
+-|-+.+..+. +.+..+-.|.++++|.+.+|.++|+|+|||.+|+.
T Consensus 225 KLrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtRs 304 (1051)
T KOG0210|consen 225 KLRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTRS 304 (1051)
T ss_pred eeeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHHH
Confidence 65544322210 11234557999999999999999999999999943
Q ss_pred hhHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHhcCCchHH
Q 001877 230 GSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPA 309 (1001)
Q Consensus 230 g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~ 309 (1001)
..+...++.+...++.++|.+.+++...++.+++++....... ..+...+..++.++...+|++|.+
T Consensus 305 ---vMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~~----------~~wyi~~~RfllLFS~IIPISLRv 371 (1051)
T KOG0210|consen 305 ---VMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGFG----------SDWYIYIIRFLLLFSSIIPISLRV 371 (1051)
T ss_pred ---HhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcCC----------CchHHHHHHHHHHHhhhceeEEEE
Confidence 3445556667777899999999988887777777665543221 123455677888999999999999
Q ss_pred HHHHHHHHhhHhhhhc----cccccccccccccCCeeEEEeCCCCccccCceEEEEEEEeccccCCCceeeeeecCc-cc
Q 001877 310 VVTTCLALGTKRMARL----NAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGT-TY 384 (1001)
Q Consensus 310 ~~~~~~~~~~~~l~~~----~i~~k~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~-~~ 384 (1001)
.++++...-...+.++ |.++|++...|+||+++++.+|||||||+|+|.+++++.+.-.+..+...+.+..-. .+
T Consensus 372 nlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~ 451 (1051)
T KOG0210|consen 372 NLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLY 451 (1051)
T ss_pred ehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhh
Confidence 9999999999888764 578999999999999999999999999999999999998643322111111110000 01
Q ss_pred CC--CCccccCCCccccCCCChHHHHHHHHHhcccccccccccCCCCcceeccCchHHHHHHHHHHcCCCCCCCcchhhh
Q 001877 385 AP--EGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALN 462 (1001)
Q Consensus 385 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lc~~~~~~~~~~~~~~~~~~~~~e~al~~~a~~~g~~~~~~~~~~~~ 462 (1001)
.+ .+........+. .....+.++..++++||+.++..+.+....|+..+|+|+|++++.+..|..+..|....+.
T Consensus 452 ~~~~~~~~~~~~~~k~---~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~it 528 (1051)
T KOG0210|consen 452 TPGRNKGKGALSRVKK---DMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAIT 528 (1051)
T ss_pred CCCcccccccchhhcC---cccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEE
Confidence 11 000000000011 1344577888899999999998876667788899999999999999999999888776665
Q ss_pred hhhhcccccccCccccccccEEEEecCCCCCceEEEEEeeC--CeEEEEEeCChhHHHHhhhhccccCCCccccCCHHHH
Q 001877 463 MLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHK--QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIR 540 (1001)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~--~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~~ 540 (1001)
...+. .....|+++..|||+|+.|||.+|||++ ++...|.|||+..|...-. ..
T Consensus 529 L~~~~--------~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq----------------~N 584 (1051)
T KOG0210|consen 529 LRVPL--------DDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQ----------------YN 584 (1051)
T ss_pred EecCC--------CcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccc----------------cc
Confidence 54442 2356899999999999999999999997 7899999999987754322 23
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHhccCCccccc-----------------------CccccCCCcEEEEEecccCCCcHHH
Q 001877 541 AELESRLNSLAGKEALRCLALALKQMPINRQT-----------------------LSYDDEKDLTFIGLVGMLDPPREEV 597 (1001)
Q Consensus 541 ~~~~~~~~~~~~~~g~r~l~~a~k~l~~~~~~-----------------------~~~~~e~~l~~lG~i~~~d~~~~~~ 597 (1001)
+++++...++|. +|+|++++|+|.++.++.+ ....+|+|+.++|++|+||++++++
T Consensus 585 dWleEE~gNMAR-EGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dV 663 (1051)
T KOG0210|consen 585 DWLEEECGNMAR-EGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDV 663 (1051)
T ss_pred hhhhhhhhhhhh-hcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhh
Confidence 578888899998 9999999999999865410 0112589999999999999999999
Q ss_pred HHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCccccc------------------------ccccccchhhccCC-
Q 001877 598 KNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDF------------------------VGRSYTASEFEELP- 652 (1001)
Q Consensus 598 ~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~------------------------~~~~~~~~~~~~~~- 652 (1001)
+.+++.||+||||+||+|||+.+||..+|+..++....... ..++++|+.++-..
T Consensus 664 k~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~ 743 (1051)
T KOG0210|consen 664 KPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLK 743 (1051)
T ss_pred HhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHH
Confidence 99999999999999999999999999999999998654331 13556665554322
Q ss_pred --hHHHHHhh--ccceEEEEeChhhHHHHHHHHhcc-CCEEEEEeCCccCHHHHhcCCceEEe-cCccHHHHhhcCeeec
Q 001877 653 --AMQQTVAL--QHMALFTRVEPSHKRMLVEALQNQ-NEVVAMTGDGVNDAPALKKADIGIAM-GSGTAVAKSASDMVLA 726 (1001)
Q Consensus 653 --~~~~~~~~--~~~~v~~r~~p~~K~~~v~~l~~~-~~~v~~iGDg~ND~~~l~~A~vgIam-~~~~~~~~~~ad~v~~ 726 (1001)
+.+..+.. ...+|+|||+|.||+++++.+|+. |..||++|||.||++|+++||+||++ |+++.+|.-|||+.+.
T Consensus 744 yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSIt 823 (1051)
T KOG0210|consen 744 YYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSIT 823 (1051)
T ss_pred HHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHH
Confidence 22333322 256899999999999999999986 89999999999999999999999996 7999999999999999
Q ss_pred CCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHH---HHHHHHHHhhhhhhhhcccCCC
Q 001877 727 DDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQ---LLWVNLVTDGLPATAIGFNKQD 803 (1001)
Q Consensus 727 ~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~~~~~~---~l~~~~~~~~~p~~~l~~~~~~ 803 (1001)
++.+-+.+.++ |||..|.|..+.-+|.+...+....++.++.....+.|..-.| +.-+..+++++|.+++..+..-
T Consensus 824 qF~Hv~rLLl~-HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv 902 (1051)
T KOG0210|consen 824 QFSHVSRLLLW-HGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDV 902 (1051)
T ss_pred HHHHHHHHhhc-cccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccc
Confidence 99998988888 9999999999999999999999888888877666666666655 4557899999999999877643
Q ss_pred -ccccccCCCCC----CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccccccccccCCCCCCCCCCCcc
Q 001877 804 -SDVMKAKPRKV----SEAVVTGWLFFRYLVIGAYVGVATVAGFIWWYVYSNEGPKLPYSELMNFDSCSTRETTHPCSIF 878 (1001)
Q Consensus 804 -~~~~~~~P~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 878 (1001)
+.....+|..+ +...++.+.|+.|.++++++|.+...++++.+- .+ +
T Consensus 903 ~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~~l~~-~e---------f------------------ 954 (1051)
T KOG0210|consen 903 SESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGALLLFD-TE---------F------------------ 954 (1051)
T ss_pred cHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHHHHhh-hh---------h------------------
Confidence 45555567433 446778888999999999998765544322221 10 0
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHhcccCccccccCCCcchHHHHHHHHHHHHHHHHHhccccccccccccc-CchhHHHH
Q 001877 879 EDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVASIILTMFLHILILYVPPLSVLFSVTPL-SWADWTAV 957 (1001)
Q Consensus 879 ~~~~~~ti~f~~lv~~~~~~~~~~~~~~~s~~~~~~~~n~~l~~~i~~~~~l~~~i~~~p~~~~~f~~~~l-~~~~w~~~ 957 (1001)
....+++|+.+++..+.-. .....-| +|.++.+-++++++.+ +..|+++.+|....+ ++.+++.+
T Consensus 955 --~~ivaisFtaLi~tELiMV---------aLtv~tw-~~~m~vae~lsL~~Yi--vsl~~l~~yfd~~f~~~~~Fl~k~ 1020 (1051)
T KOG0210|consen 955 --IHIVAISFTALILTELIMV---------ALTVRTW-HWLMVVAELLSLALYI--VSLAFLHEYFDRYFILTYVFLWKV 1020 (1051)
T ss_pred --eEeeeeeeHHHHHHHHHHH---------hhhhhhh-hHHHHHHHHHHHHHHH--HHHHHHHhHHHHHHHHHHHHHHHH
Confidence 1114678888887776522 1223334 5666667666666554 456888887777665 45566666
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccchhhh
Q 001877 958 FYLSFPVIIIDEVLKFFSRKSSGMRFKF 985 (1001)
Q Consensus 958 ~~~~~~~l~~~e~~K~~~r~~~~~~~~~ 985 (1001)
.++.++.++|..+.|+++|++.|+.|-+
T Consensus 1021 t~I~~vS~Lpl~~~K~lrrk~sPpSYaK 1048 (1051)
T KOG0210|consen 1021 TVITLVSCLPLYFIKALRRKLSPPSYAK 1048 (1051)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCcchhh
Confidence 6777888899999999999999998876
No 20
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=3.3e-87 Score=778.41 Aligned_cols=552 Identities=23% Similarity=0.329 Sum_probs=449.5
Q ss_pred HhcchHHHHHHHHHHHHHHHHHhcC---CCCcccchhhHHHHHHHhhHHHHHHHH----HHHHHHHHHHHHhcCCC-cEE
Q 001877 56 QFDDLLVKILIAAAVISFFLALING---ETGLTAFLEPSVILLILAANAAVGVIT----ETNAEKALEELRAYQAD-IAT 127 (1001)
Q Consensus 56 ~f~~~~~~~ll~~~i~~~~~~~~~~---~~~~~~~~~~~~ii~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~-~~~ 127 (1001)
+|++|+.++++++++++++++.+.. +.++ ..++++.+.+++.++.+++.++ |.|++++++.|+++.++ +++
T Consensus 29 ~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~-~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 29 MIKNPIMFVVEVGMLLALGLTIYPDLFHQESV-SRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHChHHHHHHHHHHHHHHHHHHhhhcccccc-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 6789999999999999998876632 1111 2245566666666676676666 78999999999999886 675
Q ss_pred -EEECCeEEEeeCCCCCCCcEEEecCCCccCCcEEEeeecCCceEEecccccCCCcccccchhhhcccccccCCCCceEE
Q 001877 128 -VLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILF 206 (1001)
Q Consensus 128 -v~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~~~~g~~~Vdes~LtGEs~pv~k~~~~~~~~~~~~~~~~n~l~ 206 (1001)
|.|||++++|++++|+|||+|.+++||+|||||++++ |...||||+|||||.|+.|+++. ++ +.+|
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vie---G~~~VDESaLTGES~PV~K~~g~---------d~-~~V~ 174 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIK---GLATVDESAITGESAPVIKESGG---------DF-DNVI 174 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEE---cceEEecchhcCCCCceeccCCC---------cc-Ceee
Confidence 7899999999999999999999999999999999996 67799999999999999998741 22 3499
Q ss_pred ecceeecceEEEEEEEecccccchhHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccchH
Q 001877 207 SGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLR 286 (1001)
Q Consensus 207 ~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (1001)
+||.+.+|++.++|+++|.+|.+|++.+++..++.+++|++..+..+...+..+ ++++++++.....+.
T Consensus 175 aGT~v~~G~~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~ii--~l~~~~~~~~~~~~~--------- 243 (673)
T PRK14010 175 GGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTII--FLVVILTMYPLAKFL--------- 243 (673)
T ss_pred cCceeecceEEEEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhHH--HHHHHHHHHHHHhhc---------
Confidence 999999999999999999999999999999999989999997766554333222 222222221111110
Q ss_pred HHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhHhhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEec
Q 001877 287 GAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVH 366 (1001)
Q Consensus 287 ~~~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~i~~k~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~ 366 (1001)
.....+...++++++++||+|+..++++...++.||+|+|+++|+.+++|+||++|++|||||||||+|++.+.++...+
T Consensus 244 ~~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~ 323 (673)
T PRK14010 244 NFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVK 323 (673)
T ss_pred cHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCC
Confidence 11223556677888899999999999999999999999999999999999999999999999999999887776654321
Q ss_pred cccCCCceeeeeecCcccCCCCccccCCCccccCCCChHHHHHHHHHhcccccccccccCCCCcceeccCchHHHHHHHH
Q 001877 367 SVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLA 446 (1001)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lc~~~~~~~~~~~~~~~~~~~~~e~al~~~a 446 (1001)
+ ....+++....+|+.. ..||.+.|+++++
T Consensus 324 ~-------------------------------------~~~~~ll~~a~~~~~~-------------s~~P~~~AIv~~a 353 (673)
T PRK14010 324 S-------------------------------------SSFERLVKAAYESSIA-------------DDTPEGRSIVKLA 353 (673)
T ss_pred C-------------------------------------ccHHHHHHHHHHhcCC-------------CCChHHHHHHHHH
Confidence 0 0012233444455532 1389999999999
Q ss_pred HHcCCCCCCCcchhhhhhhhcccccccCccccccccEEEEecCCCCCceEEEEEeeCCeEEEEEeCChhHHHHhhhhccc
Q 001877 447 EKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILC 526 (1001)
Q Consensus 447 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~~~~~l~~KGa~e~i~~~c~~~~~ 526 (1001)
++.|+... ......+||++++|+|++.++ ++ .+.||+++.+++.|+.
T Consensus 354 ~~~~~~~~--------------------------~~~~~~~pF~~~~k~~gv~~~--g~--~i~kGa~~~il~~~~~--- 400 (673)
T PRK14010 354 YKQHIDLP--------------------------QEVGEYIPFTAETRMSGVKFT--TR--EVYKGAPNSMVKRVKE--- 400 (673)
T ss_pred HHcCCCch--------------------------hhhcceeccccccceeEEEEC--CE--EEEECCHHHHHHHhhh---
Confidence 87664321 001124799999999998753 33 4559999999999975
Q ss_pred cCCCccccCCHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCcccccCccccCCCcEEEEEecccCCCcHHHHHHHHHHHh
Q 001877 527 NDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMT 606 (1001)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~l~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~ 606 (1001)
+|...+ ..+.+..++++. +|+|+++++ .|++++|+++++|++||+++++|++||+
T Consensus 401 --~g~~~~------~~~~~~~~~~a~-~G~~~l~v~----------------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~ 455 (673)
T PRK14010 401 --AGGHIP------VDLDALVKGVSK-KGGTPLVVL----------------EDNEILGVIYLKDVIKDGLVERFRELRE 455 (673)
T ss_pred --cCCCCc------hHHHHHHHHHHh-CCCeEEEEE----------------ECCEEEEEEEeecCCcHHHHHHHHHHHH
Confidence 121111 124455667777 999987654 3679999999999999999999999999
Q ss_pred CCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeChhhHHHHHHHHhccCC
Q 001877 607 AGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNE 686 (1001)
Q Consensus 607 ~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~~~ 686 (1001)
+||+++|+|||++.||.++|+++|+.. +++|++|+||.++|+.+|++|+
T Consensus 456 ~GI~vvMiTGDn~~TA~aIA~elGI~~-------------------------------v~A~~~PedK~~iV~~lQ~~G~ 504 (673)
T PRK14010 456 MGIETVMCTGDNELTAATIAKEAGVDR-------------------------------FVAECKPEDKINVIREEQAKGH 504 (673)
T ss_pred CCCeEEEECCCCHHHHHHHHHHcCCce-------------------------------EEcCCCHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999975 8999999999999999999999
Q ss_pred EEEEEeCCccCHHHHhcCCceEEecCccHHHHhhcCeeecCCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001877 687 VVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIF 766 (1001)
Q Consensus 687 ~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~ 766 (1001)
.|+|+|||.||+|||++||||||||+|++.||++||+|+.++++..+++++++||++|.|+++++.|.+..|+...+.++
T Consensus 505 ~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~ 584 (673)
T PRK14010 505 IVAMTGDGTNDAPALAEANVGLAMNSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAIL 584 (673)
T ss_pred EEEEECCChhhHHHHHhCCEEEEeCCCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998887
Q ss_pred HHHHh
Q 001877 767 VAAVL 771 (1001)
Q Consensus 767 ~~~~~ 771 (1001)
...+.
T Consensus 585 ~a~~~ 589 (673)
T PRK14010 585 PAMFM 589 (673)
T ss_pred HHHHH
Confidence 76554
No 21
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=7.2e-85 Score=759.50 Aligned_cols=554 Identities=24% Similarity=0.296 Sum_probs=456.9
Q ss_pred HHhcchHHHHHHHHHHHHHHHHHhcCC-----CCcccchhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcCCC-cEEE
Q 001877 55 KQFDDLLVKILIAAAVISFFLALINGE-----TGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQAD-IATV 128 (1001)
Q Consensus 55 ~~f~~~~~~~ll~~~i~~~~~~~~~~~-----~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~v 128 (1001)
.||++|+.++++++++++++++++... .....+...+.+++.+++..+++.++++|+++.++.|+++.++ +++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 478999999999999999998765310 1123345555666667777788889999999999999999886 6999
Q ss_pred EECCe-EEEeeCCCCCCCcEEEecCCCccCCcEEEeeecCCceEEecccccCCCcccccchhhhcccccccCCCCceEEe
Q 001877 129 LRNGC-FSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFS 207 (1001)
Q Consensus 129 ~R~g~-~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~~~~g~~~Vdes~LtGEs~pv~k~~~~~~~~~~~~~~~~n~l~~ 207 (1001)
+|||+ +++|++++|+|||+|.+++||+|||||++++ |.+.||||+|||||.|+.|+++.. .+.+|+
T Consensus 109 ir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vie---G~a~VDESaLTGES~PV~K~~G~~----------~~~V~a 175 (679)
T PRK01122 109 LREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIE---GVASVDESAITGESAPVIRESGGD----------FSSVTG 175 (679)
T ss_pred EECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEE---ccEEEEcccccCCCCceEeCCCCc----------cCeEEe
Confidence 99988 8999999999999999999999999999996 578999999999999999987421 234999
Q ss_pred cceeecceEEEEEEEecccccchhHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccchHH
Q 001877 208 GTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRG 287 (1001)
Q Consensus 208 Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1001)
||.+.+|++.++|+++|.+|.+|++.+.+.+++.+++|++..++.+...+..+.+++++.++.+.... . .
T Consensus 176 GT~v~~G~~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~~-g------~--- 245 (679)
T PRK01122 176 GTRVLSDWIVIRITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAAYS-G------G--- 245 (679)
T ss_pred ceEEEeeeEEEEEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHh-C------c---
Confidence 99999999999999999999999999999999899999999888877666554444433333322111 0 0
Q ss_pred HHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhHhhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecc
Q 001877 288 AIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHS 367 (1001)
Q Consensus 288 ~~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~i~~k~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~ 367 (1001)
...+..++++++++|||+|+...+++...++.||+|+|+++|+.+++|+||++|++|||||||||+|+|.+.+++..++
T Consensus 246 -~~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~ 324 (679)
T PRK01122 246 -ALSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPG 324 (679)
T ss_pred -hHHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCC
Confidence 1146677889999999999999999999999999999999999999999999999999999999999999998765321
Q ss_pred ccCCCceeeeeecCcccCCCCccccCCCccccCCCChHHHHHHHHHhcccccccccccCCCCcceeccCchHHHHHHHHH
Q 001877 368 VQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAE 447 (1001)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lc~~~~~~~~~~~~~~~~~~~~~e~al~~~a~ 447 (1001)
. ..+ ++..+..+|+... .||...|++++++
T Consensus 325 ~----------------------------------~~~---~ll~~a~~~s~~s-------------~hP~~~AIv~~a~ 354 (679)
T PRK01122 325 V----------------------------------TEE---ELADAAQLSSLAD-------------ETPEGRSIVVLAK 354 (679)
T ss_pred C----------------------------------CHH---HHHHHHHHhcCCC-------------CCchHHHHHHHHH
Confidence 0 111 2333444454321 3678899999987
Q ss_pred H-cCCCCCCCcchhhhhhhhcccccccCccccccccEEEEecCCCCCceEEEEEeeCCeEEEEEeCChhHHHHhhhhccc
Q 001877 448 K-VGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILC 526 (1001)
Q Consensus 448 ~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~~~~~l~~KGa~e~i~~~c~~~~~ 526 (1001)
+ .+.... +..++....+||++++++|++.+. + ..+.||++|.+++.|+.
T Consensus 355 ~~~~~~~~-----------------------~~~~~~~~~~pF~s~~~~~gv~~~--g--~~~~kGa~e~il~~~~~--- 404 (679)
T PRK01122 355 QRFNLRER-----------------------DLQSLHATFVPFSAQTRMSGVDLD--G--REIRKGAVDAIRRYVES--- 404 (679)
T ss_pred hhcCCCch-----------------------hhccccceeEeecCcCceEEEEEC--C--EEEEECCHHHHHHHHHh---
Confidence 6 332110 112445677899999998887653 3 57899999999999964
Q ss_pred cCCCccccCCHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCcccccCccccCCCcEEEEEecccCCCcHHHHHHHHHHHh
Q 001877 527 NDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMT 606 (1001)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~l~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~ 606 (1001)
+|... .+++.+..++++. +|.|++++|+ |++++|+++++|++||+++++|++||+
T Consensus 405 --~g~~~------~~~~~~~~~~~a~-~G~~~l~va~----------------~~~~lG~i~l~D~~R~~~~eai~~Lr~ 459 (679)
T PRK01122 405 --NGGHF------PAELDAAVDEVAR-KGGTPLVVAE----------------DNRVLGVIYLKDIVKPGIKERFAELRK 459 (679)
T ss_pred --cCCcC------hHHHHHHHHHHHh-CCCcEEEEEE----------------CCeEEEEEEEeccCchhHHHHHHHHHH
Confidence 12211 2456667778887 9999999883 678999999999999999999999999
Q ss_pred CCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeChhhHHHHHHHHhccCC
Q 001877 607 AGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNE 686 (1001)
Q Consensus 607 ~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~~~ 686 (1001)
+||+++|+|||++.||.++|+++|+++ ++||++|+||.++|+.+|++|+
T Consensus 460 ~GI~vvMiTGDn~~TA~aIA~elGId~-------------------------------v~A~~~PedK~~iV~~lQ~~G~ 508 (679)
T PRK01122 460 MGIKTVMITGDNPLTAAAIAAEAGVDD-------------------------------FLAEATPEDKLALIRQEQAEGR 508 (679)
T ss_pred CCCeEEEECCCCHHHHHHHHHHcCCcE-------------------------------EEccCCHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999965 8999999999999999999999
Q ss_pred EEEEEeCCccCHHHHhcCCceEEecCccHHHHhhcCeeecCCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001877 687 VVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIF 766 (1001)
Q Consensus 687 ~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~ 766 (1001)
.|+|+|||.||+|||++||||||||+|++.+|++||+|+.|+++..+++++++||+.+-.--....|++...++-.+.++
T Consensus 509 ~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~~~~~~i~ 588 (679)
T PRK01122 509 LVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDVAKYFAII 588 (679)
T ss_pred eEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999997777778898876666555444
Q ss_pred HH
Q 001877 767 VA 768 (1001)
Q Consensus 767 ~~ 768 (1001)
-.
T Consensus 589 p~ 590 (679)
T PRK01122 589 PA 590 (679)
T ss_pred HH
Confidence 33
No 22
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-83 Score=688.33 Aligned_cols=674 Identities=31% Similarity=0.443 Sum_probs=531.4
Q ss_pred cCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHhcchHHHHHHHHHHHHHHHHHhcCCCCcc
Q 001877 6 ARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLT 85 (1001)
Q Consensus 6 ~~~~~~~~~~l~~~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~~i~~~~~~~~~~~~~~~ 85 (1001)
+.+++++.+.|..+. .|||++|+++|++.||.|++.++|.+ .+..|+.-|++|+.+..-.++++...+ ..+.....
T Consensus 20 ~~p~eeVfeeL~~t~-~GLt~~E~~eRlk~fG~NkleEkken-~~lKFl~Fm~~PlswVMEaAAimA~~L--ang~~~~~ 95 (942)
T KOG0205|consen 20 AIPIEEVFEELLCTR-EGLTSDEVEERLKIFGPNKLEEKKES-KFLKFLGFMWNPLSWVMEAAAIMAIGL--ANGGGRPP 95 (942)
T ss_pred cCchhhhHHHHhcCC-CCCchHHHHHHHHhhCchhhhhhhhh-HHHHHHHHHhchHHHHHHHHHHHHHHH--hcCCCCCc
Confidence 467899999998774 49999999999999999999987754 556677889999999988888876644 44333445
Q ss_pred cchhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEECCeEEEeeCCCCCCCcEEEecCCCccCCcEEEeee
Q 001877 86 AFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEM 165 (1001)
Q Consensus 86 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~~ 165 (1001)
.|.+...|..++++|+.+++++|+++.+...+|++-...+++|+|||+|.+++++.||||||+.++.||+||||++|++
T Consensus 96 DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~- 174 (942)
T KOG0205|consen 96 DWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARLLE- 174 (942)
T ss_pred chhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEecCccceec-
Confidence 7888899999999999999999999999999999888889999999999999999999999999999999999999998
Q ss_pred cCCceEEecccccCCCcccccchhhhcccccccCCCCceEEecceeecceEEEEEEEecccccchhHHHHhccCCCCCCc
Q 001877 166 LSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTP 245 (1001)
Q Consensus 166 ~~g~~~Vdes~LtGEs~pv~k~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~ 245 (1001)
.+.+.||+|.|||||.|+.|.+ ++-+|+||.|.+|++.++|++||.+|..|+-+..+.. ......
T Consensus 175 -gD~LkiDQSAlTGESLpvtKh~-------------gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~GH 239 (942)
T KOG0205|consen 175 -GDPLKIDQSALTGESLPVTKHP-------------GDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGH 239 (942)
T ss_pred -CCccccchhhhcCCccccccCC-------------CCceecccccccceEEEEEEEeccceeehhhHHhhcC-CCCccc
Confidence 5689999999999999999988 4558999999999999999999999999999988876 667788
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhHhhhhc
Q 001877 246 LKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARL 325 (1001)
Q Consensus 246 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~~~~l~~~ 325 (1001)
+++-++.+.++.+..+++-.++.+++.+..... ..+.... ....+++.-+|.++|..+++.++.++.||+++
T Consensus 240 FqkVLt~IGn~ci~si~~g~lie~~vmy~~q~R-----~~r~~i~---nLlvllIGgiPiamPtVlsvTMAiGs~rLaqq 311 (942)
T KOG0205|consen 240 FQKVLTGIGNFCICSIALGMLIEITVMYPIQHR-----LYRDGID---NLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQ 311 (942)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhh-----hhhhhhh---heheeeecccccccceeeeehhhHHHHHHHhc
Confidence 999888888766543322222222222111100 0011111 12234445599999999999999999999999
Q ss_pred cccccccccccccCCeeEEEeCCCCccccCceEEEE--EEEeccccCCCceeeeeecCcccCCCCccccCCCccccCCCC
Q 001877 326 NAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAK--ICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQ 403 (1001)
Q Consensus 326 ~i~~k~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (1001)
|+++++..++|+++.+|++|+|||||||.|++++.+ +... .++. +
T Consensus 312 gAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~-------------v~gv--------------------~ 358 (942)
T KOG0205|consen 312 GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVF-------------VKGV--------------------D 358 (942)
T ss_pred ccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceee-------------ecCC--------------------C
Confidence 999999999999999999999999999999999976 2111 1111 1
Q ss_pred hHHHHHHHHHhcccccccccccCCCCcceeccCchHHHHHHHHHHcCCCCCCCcchhhhhhhhcccccccCccccccccE
Q 001877 404 LPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKK 483 (1001)
Q Consensus 404 ~~~~~~~~~~~~lc~~~~~~~~~~~~~~~~~~~~~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (1001)
...+. +..|.+ +.. .-.|..|.|++...+. + +.-+..|+.
T Consensus 359 ~D~~~-L~A~rA----sr~----------en~DAID~A~v~~L~d-----------------P--------Keara~ike 398 (942)
T KOG0205|consen 359 KDDVL-LTAARA----SRK----------ENQDAIDAAIVGMLAD-----------------P--------KEARAGIKE 398 (942)
T ss_pred hHHHH-HHHHHH----hhh----------cChhhHHHHHHHhhcC-----------------H--------HHHhhCceE
Confidence 11221 222221 111 1136778888765431 0 112457889
Q ss_pred EEEecCCCCCceEEEEEeeC-CeEEEEEeCChhHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhhhhhHHHHHH
Q 001877 484 VSILEFSRDRKMMSVLCSHK-QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALA 562 (1001)
Q Consensus 484 l~~~~F~s~~k~msviv~~~-~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a 562 (1001)
++-+||++-.||....+.++ |+-.-.+|||||.|++.|+. +++.++.+.+.+++|++ +|+|.+++|
T Consensus 399 vhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~------------~~~i~~~vh~~id~~Ae-RGlRSLgVA 465 (942)
T KOG0205|consen 399 VHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNE------------DHDIPERVHSIIDKFAE-RGLRSLAVA 465 (942)
T ss_pred EeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhc------------cCcchHHHHHHHHHHHH-hcchhhhhh
Confidence 99999999999999888775 67778899999999999964 23456778889999998 999999999
Q ss_pred hccCCcccccCccccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCccccccccc
Q 001877 563 LKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRS 642 (1001)
Q Consensus 563 ~k~l~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~ 642 (1001)
++..++..... -.....|+|+.-+-||+|.++.++|++....|++|.|+|||...-++..++++|.-..... +..
T Consensus 466 rq~v~e~~~~~---~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmyp--ss~ 540 (942)
T KOG0205|consen 466 RQEVPEKTKES---PGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP--SSA 540 (942)
T ss_pred hhccccccccC---CCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCC--chh
Confidence 99887643322 2345789999999999999999999999999999999999999999999999998654322 111
Q ss_pred ccchh-hccCChHHHHHhhccceEEEEeChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEEecCccHHHHhhc
Q 001877 643 YTASE-FEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSAS 721 (1001)
Q Consensus 643 ~~~~~-~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~~a 721 (1001)
+-|.. -+.+......+.+++..=|+.+.|++|.++|+.||++++.++|+|||+||+|++|.||+|||+..+++.++.+|
T Consensus 541 llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~as 620 (942)
T KOG0205|consen 541 LLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSAS 620 (942)
T ss_pred hccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccc
Confidence 11111 12333344555566667789999999999999999999999999999999999999999999999999999999
Q ss_pred CeeecCCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHhhhhhhhhccc
Q 001877 722 DMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPATAIGFN 800 (1001)
Q Consensus 722 d~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~l~~~ 800 (1001)
|+|+....++.+..++..+|.+|.|++.+..|.++..+-.++..++ ..+-+...++|...+++.++-|. +..+.+.+
T Consensus 621 diVltepglSviI~avltSraIfqrmknytiyavsitiriv~gfml-~alIw~~df~pfmvliiailnd~-t~mtis~d 697 (942)
T KOG0205|consen 621 DIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFML-IALIWEFDFSPFMVLIIAILNDG-TIMTISKD 697 (942)
T ss_pred cEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHHHHHHHHH-HHHHHHhcCCHHHHHHHHHhcCC-ceEEEEcc
Confidence 9999999999999999999999999999999988776654432222 22223345777777777777664 44444443
No 23
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=2.9e-81 Score=727.15 Aligned_cols=558 Identities=24% Similarity=0.350 Sum_probs=456.5
Q ss_pred HHhcchHHHHHHHHHHHHHHHHHhcC---CCCc-ccchhh---HHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcCCCc-E
Q 001877 55 KQFDDLLVKILIAAAVISFFLALING---ETGL-TAFLEP---SVILLILAANAAVGVITETNAEKALEELRAYQADI-A 126 (1001)
Q Consensus 55 ~~f~~~~~~~ll~~~i~~~~~~~~~~---~~~~-~~~~~~---~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~ 126 (1001)
.||++|..+++++++++++++++.+. ..+. ..|+++ +.+++.+++..+++.++++|+++++++|++..++. +
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 37899999999999999999876521 1011 124443 34445567778888899999999999999988774 8
Q ss_pred EEEE-CCeEEEeeCCCCCCCcEEEecCCCccCCcEEEeeecCCceEEecccccCCCcccccchhhhcccccccCCCCceE
Q 001877 127 TVLR-NGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNIL 205 (1001)
Q Consensus 127 ~v~R-~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~~~~g~~~Vdes~LtGEs~pv~k~~~~~~~~~~~~~~~~n~l 205 (1001)
+|+| ||++++|++++|+|||+|.+++||+|||||++++ |.+.||||+|||||.|+.|++++. .+.+
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vie---G~~~VDESaLTGES~PV~K~~g~~----------~~~V 174 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIE---GVASVDESAITGESAPVIKESGGD----------FASV 174 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEE---ccEEEEcccccCCCCceeecCCCC----------ccee
Confidence 8885 8999999999999999999999999999999995 689999999999999999987521 1238
Q ss_pred EecceeecceEEEEEEEecccccchhHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccch
Q 001877 206 FSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFL 285 (1001)
Q Consensus 206 ~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (1001)
|+||.+.+|++.++|+++|.+|.+|++.++++.++.+++|++..++.+...+..+.+++++..+.+.. +. +
T Consensus 175 ~aGT~v~~G~~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~~~~~~~--~~-----~-- 245 (675)
T TIGR01497 175 TGGTRILSDWLVVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTATLWPFAA--YG-----G-- 245 (675)
T ss_pred ecCcEEEeeEEEEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hc-----C--
Confidence 99999999999999999999999999999999998889999988887776655444433333322211 11 0
Q ss_pred HHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhHhhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEe
Q 001877 286 RGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVV 365 (1001)
Q Consensus 286 ~~~~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~i~~k~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 365 (1001)
....+...+++++++|||+|+...+.....++.||+++|+++|+.+++|++|++|++|||||||||+|+|++.+++..
T Consensus 246 --~~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~ 323 (675)
T TIGR01497 246 --NAISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPA 323 (675)
T ss_pred --hhHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEec
Confidence 011355568889999999988877877788999999999999999999999999999999999999999999988653
Q ss_pred ccccCCCceeeeeecCcccCCCCccccCCCccccCCCChHHHHHHHHHhcccccccccccCCCCcceeccCchHHHHHHH
Q 001877 366 HSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVL 445 (1001)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lc~~~~~~~~~~~~~~~~~~~~~e~al~~~ 445 (1001)
++. ..+ ++....++|+.. ..||.+.|++++
T Consensus 324 ~~~----------------------------------~~~---~ll~~aa~~~~~-------------s~hP~a~Aiv~~ 353 (675)
T TIGR01497 324 QGV----------------------------------DEK---TLADAAQLASLA-------------DDTPEGKSIVIL 353 (675)
T ss_pred CCC----------------------------------cHH---HHHHHHHHhcCC-------------CCCcHHHHHHHH
Confidence 110 111 233334444422 147899999999
Q ss_pred HHHcCCCCCCCcchhhhhhhhcccccccCccccccccEEEEecCCCCCceEEEEEeeCCeEEEEEeCChhHHHHhhhhcc
Q 001877 446 AEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNIL 525 (1001)
Q Consensus 446 a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~~~~~l~~KGa~e~i~~~c~~~~ 525 (1001)
+++.|..... ..++.....||++++++|++.+. ++ ..+.||++|.+++.|+.
T Consensus 354 a~~~~~~~~~-----------------------~~~~~~~~~pf~~~~~~sg~~~~-~g--~~~~kGa~e~i~~~~~~-- 405 (675)
T TIGR01497 354 AKQLGIREDD-----------------------VQSLHATFVEFTAQTRMSGINLD-NG--RMIRKGAVDAIKRHVEA-- 405 (675)
T ss_pred HHHcCCCccc-----------------------cccccceEEEEcCCCcEEEEEEe-CC--eEEEECCHHHHHHHHHh--
Confidence 9876643210 11234567899999887776543 23 46899999999998853
Q ss_pred ccCCCccccCCHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCcccccCccccCCCcEEEEEecccCCCcHHHHHHHHHHH
Q 001877 526 CNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCM 605 (1001)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~l~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~ 605 (1001)
+|... ...+.+.+++++. +|.|++++|+ |.+++|+++++|++||+++++|++||
T Consensus 406 ---~g~~~------~~~~~~~~~~~a~-~G~r~l~va~----------------~~~~lG~i~l~D~~Rp~a~eaI~~l~ 459 (675)
T TIGR01497 406 ---NGGHI------PTDLDQAVDQVAR-QGGTPLVVCE----------------DNRIYGVIYLKDIVKGGIKERFAQLR 459 (675)
T ss_pred ---cCCCC------cHHHHHHHHHHHh-CCCeEEEEEE----------------CCEEEEEEEecccchhHHHHHHHHHH
Confidence 22211 1345667778887 9999999884 46899999999999999999999999
Q ss_pred hCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeChhhHHHHHHHHhccC
Q 001877 606 TAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQN 685 (1001)
Q Consensus 606 ~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~~ 685 (1001)
++|++++|+|||+..+|.++|+++|+++ +++|++|++|.++++.+|++|
T Consensus 460 ~~Gi~v~miTGD~~~ta~~iA~~lGI~~-------------------------------v~a~~~PedK~~~v~~lq~~g 508 (675)
T TIGR01497 460 KMGIKTIMITGDNRLTAAAIAAEAGVDD-------------------------------FIAEATPEDKIALIRQEQAEG 508 (675)
T ss_pred HCCCEEEEEcCCCHHHHHHHHHHcCCCE-------------------------------EEcCCCHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999965 789999999999999999999
Q ss_pred CEEEEEeCCccCHHHHhcCCceEEecCccHHHHhhcCeeecCCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001877 686 EVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCI 765 (1001)
Q Consensus 686 ~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~ 765 (1001)
+.|+|+|||.||+|||++||+||||++|++.++++||+++.++++..+++++++||+++-+......|++..++...+.+
T Consensus 509 ~~VamvGDG~NDapAL~~AdvGiAm~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~~~~ 588 (675)
T TIGR01497 509 KLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKYFAI 588 (675)
T ss_pred CeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988877766
Q ss_pred HHHHHh
Q 001877 766 FVAAVL 771 (1001)
Q Consensus 766 ~~~~~~ 771 (1001)
+-..|.
T Consensus 589 ~~~~~~ 594 (675)
T TIGR01497 589 IPAIFA 594 (675)
T ss_pred HHHHHH
Confidence 654443
No 24
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-78 Score=667.81 Aligned_cols=839 Identities=22% Similarity=0.272 Sum_probs=572.9
Q ss_pred CCCCCH-HHHHHHHhhcCCCCCCCCcCccHHHHHHHHhcchHHHHHHHHHHHHHHHHHhcCCCCcccchhhH-HHHHHHh
Q 001877 21 TKGLTD-SQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPS-VILLILA 98 (1001)
Q Consensus 21 ~~GLs~-~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~~-~ii~~~~ 98 (1001)
.+|+.+ +++..-..+||+|+.+.+.| .|-.+|.+.-..|+..+..++..+++.-- +|+.++ .+.+++.
T Consensus 160 ~~G~~~~~~i~~a~~~~G~N~fdi~vP-tF~eLFkE~A~aPfFVFQVFcvgLWCLDe---------yWYySlFtLfMli~ 229 (1160)
T KOG0209|consen 160 STGHEEESEIKLAKHKYGKNKFDIVVP-TFSELFKEHAVAPFFVFQVFCVGLWCLDE---------YWYYSLFTLFMLIA 229 (1160)
T ss_pred ccCcchHHHHHHHHHHhcCCccccCCc-cHHHHHHHhccCceeeHhHHhHHHHHhHH---------HHHHHHHHHHHHHH
Confidence 357764 34444455699999998775 48888888888999988888888777542 333333 3333333
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcC--CCcEEEEECCeEEEeeCCCCCCCcEEEecC---CCccCCcEEEeeecCCceEEe
Q 001877 99 ANAAVGVITETNAEKALEELRAYQ--ADIATVLRNGCFSILPAAELVPGDIVEVNV---GCKIPADMRMIEMLSNQLRVD 173 (1001)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~v~R~g~~~~i~~~~Lv~GDiI~l~~---G~~iPaD~~ll~~~~g~~~Vd 173 (1001)
+.+.+- . .+.+.+.+++++. +..+.|+|+++|+.+.++||.|||+|.+.. ...||||.+|+ .|.|.||
T Consensus 230 fE~tlV-~---Qrm~~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL---~GsciVn 302 (1160)
T KOG0209|consen 230 FEATLV-K---QRMRTLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLL---RGSCIVN 302 (1160)
T ss_pred HHHHHH-H---HHHHHHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEE---ecceeec
Confidence 333332 2 2335566676664 446889999999999999999999999977 56899999999 5999999
Q ss_pred cccccCCCcccccchhhhcccc----cccCCCCceEEecceeec-------------ceEEEEEEEecccccchhHHHHh
Q 001877 174 QAILTGESCSVEKELDSIIATN----AVYQDKTNILFSGTVVVA-------------GRARAVVVGVGANTAMGSIRDSM 236 (1001)
Q Consensus 174 es~LtGEs~pv~k~~~~~~~~~----~~~~~~~n~l~~Gt~v~~-------------g~~~~~V~~tG~~T~~g~i~~~~ 236 (1001)
|++|||||.|..|.+....+.+ ....++.+++|.||++++ |-+.+.|++||.+|..|++.|.+
T Consensus 303 EaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRti 382 (1160)
T KOG0209|consen 303 EAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTI 382 (1160)
T ss_pred hhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeE
Confidence 9999999999999875544322 223346789999999974 66899999999999999999999
Q ss_pred ccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH
Q 001877 237 LQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLA 316 (1001)
Q Consensus 237 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~~~~ 316 (1001)
....++.|.-.++.-.|..++..++++.+..+|.-. ..++. ++-...|+-++.++..++|+-||+-++++..
T Consensus 383 lf~aervTaNn~Etf~FILFLlVFAiaAa~Yvwv~G---skd~~-----RsrYKL~LeC~LIlTSVvPpELPmELSmAVN 454 (1160)
T KOG0209|consen 383 LFSAERVTANNRETFIFILFLLVFAIAAAGYVWVEG---SKDPT-----RSRYKLFLECTLILTSVVPPELPMELSMAVN 454 (1160)
T ss_pred EecceeeeeccHHHHHHHHHHHHHHHHhhheEEEec---ccCcc-----hhhhheeeeeeEEEeccCCCCCchhhhHHHH
Confidence 987777665555433333333222222222222211 11111 2223445556677889999999999999999
Q ss_pred HhhHhhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEeccccCCCceeeeeecCcccCCCCccccCCCc
Q 001877 317 LGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGI 396 (1001)
Q Consensus 317 ~~~~~l~~~~i~~k~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (1001)
.+...++|.++.|..+-++.-.|++|+.|||||||||+..|.|.++--...... . ....+
T Consensus 455 sSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~-----------~-------~~~~s-- 514 (1160)
T KOG0209|consen 455 SSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEG-----------A-------LTPAS-- 514 (1160)
T ss_pred HHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcc-----------c-------ccchh--
Confidence 999999999999999999999999999999999999999999998754221100 0 00000
Q ss_pred cccCCCChHHHHHHHHHhcccccccccccCCCCcceeccCchHHHHHHHHHHcCCCCCCCcchhhhhhhhcccccccCcc
Q 001877 397 QLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHH 476 (1001)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~lc~~~~~~~~~~~~~~~~~~~~~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (1001)
....+.+..+ +.||....- + + ..+|||.|.|.++. .|++....+... +. +.
T Consensus 515 ----~~p~~t~~vl----AscHsLv~l-e--~---~lVGDPlEKA~l~~---v~W~~~k~~~v~-----p~-------~~ 565 (1160)
T KOG0209|consen 515 ----KAPNETVLVL----ASCHSLVLL-E--D---KLVGDPLEKATLEA---VGWNLEKKNSVC-----PR-------EG 565 (1160)
T ss_pred ----hCCchHHHHH----HHHHHHHHh-c--C---cccCChHHHHHHHh---cCcccccCcccC-----CC-------cC
Confidence 0122334334 445543221 1 1 26799999998864 455543211000 00 01
Q ss_pred ccccccEEEEecCCCCCceEEEEEeeCC-----eEEEEEeCChhHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHh
Q 001877 477 WEIEFKKVSILEFSRDRKMMSVLCSHKQ-----MCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLA 551 (1001)
Q Consensus 477 ~~~~~~~l~~~~F~s~~k~msviv~~~~-----~~~l~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (1001)
.....++.+.+.|+|..|||||+++..+ ++++.+|||||.|.++....+ ...++.+.+|+
T Consensus 566 ~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~dvP---------------~dY~~iYk~yt 630 (1160)
T KOG0209|consen 566 NGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRDVP---------------KDYDEIYKRYT 630 (1160)
T ss_pred CCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHhCc---------------hhHHHHHHHHh
Confidence 1125678899999999999999998764 689999999999999886543 23566778899
Q ss_pred hhhhhHHHHHHhccCCccc----ccCccc-cCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHH
Q 001877 552 GKEALRCLALALKQMPINR----QTLSYD-DEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESIC 626 (1001)
Q Consensus 552 ~~~g~r~l~~a~k~l~~~~----~~~~~~-~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia 626 (1001)
. +|.||||++||+++.-. .+...+ .|+||+|.|++.|.-|+++|++++|++|++++++++|+|||++.||.++|
T Consensus 631 R-~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVa 709 (1160)
T KOG0209|consen 631 R-QGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVA 709 (1160)
T ss_pred h-ccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheeh
Confidence 8 99999999999998322 233444 89999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCcccc-----------------cc--------------------cccccchhhccCChH-HHHHhhccceEEEE
Q 001877 627 HKIGAFDHLVD-----------------FV--------------------GRSYTASEFEELPAM-QQTVALQHMALFTR 668 (1001)
Q Consensus 627 ~~~gi~~~~~~-----------------~~--------------------~~~~~~~~~~~~~~~-~~~~~~~~~~v~~r 668 (1001)
+++|+...... .+ +.+++|+.++.+... .+...+.++.||||
T Consensus 710 k~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfAR 789 (1160)
T KOG0209|consen 710 KEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFAR 789 (1160)
T ss_pred heeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEe
Confidence 99998754110 00 134556666555433 34566778999999
Q ss_pred eChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEEecCccHHHH------------------------------
Q 001877 669 VEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAK------------------------------ 718 (1001)
Q Consensus 669 ~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~------------------------------ 718 (1001)
+.|.||..++..+++.|..++|||||.||++|||+||||||+=+++...+
T Consensus 790 vaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~ 869 (1160)
T KOG0209|consen 790 VAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNNPEESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRP 869 (1160)
T ss_pred eChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcCChhhhhHHhhhhhhccccCchhhHHHhhhccCCCC
Confidence 99999999999999999999999999999999999999999743322110
Q ss_pred -----------------------------------------hhcCeeecCCCchHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 001877 719 -----------------------------------------SASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISS 757 (1001)
Q Consensus 719 -----------------------------------------~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ 757 (1001)
-||.+.....+..++.+.|+.||+++.+.-|+++.....
T Consensus 870 ~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~IIrQGRctLVtTlQMfKILALN 949 (1160)
T KOG0209|consen 870 PVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTHIIRQGRCTLVTTLQMFKILALN 949 (1160)
T ss_pred CCCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccccccccchHHHHHHHHHhcchhHHHHHHHHHHHHHH
Confidence 033444444567899999999999999999999877655
Q ss_pred HHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHhhhhhhhhcccCCCccccccCCCCCCCCccchHHHHHHHHHHHHHHHH
Q 001877 758 NIGEVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMKAKPRKVSEAVVTGWLFFRYLVIGAYVGVA 837 (1001)
Q Consensus 758 ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 837 (1001)
.++....+-+..+-|. -+++.|.+..-+++. .--++++-.+|-+.+-++.|.. +++|...+.+.+.+..++
T Consensus 950 ~LisAYslSvlyldGV--KfgD~QaTisGlLla-~cFlfISrskPLetLSkeRP~~---nIFN~Y~i~svl~QFaVH--- 1020 (1160)
T KOG0209|consen 950 CLISAYSLSVLYLDGV--KFGDTQATISGLLLA-ACFLFISRSKPLETLSKERPLP---NIFNVYIILSVLLQFAVH--- 1020 (1160)
T ss_pred HHHHHHHHHHhhhcCc--eecchhHhHHHHHHH-HHHhheecCCchhhHhhcCCCC---CcchHHHHHHHHHHHHHH---
Confidence 5544443333333333 477777766555543 2334556666778887777743 677776666555554443
Q ss_pred HHHHHHHHHHhhC--CCCCCccccccccccCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHHHHhcccCccccccCCC
Q 001877 838 TVAGFIWWYVYSN--EGPKLPYSELMNFDSCSTRETTHPCSIFEDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPW 915 (1001)
Q Consensus 838 ~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ti~f~~lv~~~~~~~~~~~~~~~s~~~~~~~ 915 (1001)
+..++|..... -.+...--++. .-|......|..|..-...|+.+.-.. ..+.+|.....
T Consensus 1021 --~~tLvYi~~~a~~~~p~~~~vdl~--------------~~F~PsllNt~vyiisl~~QvsTFAVN--Y~G~PF~Esl~ 1082 (1160)
T KOG0209|consen 1021 --IATLVYITGEAYKLEPPEEKVDLE--------------EKFSPSLLNTTVYIISLAQQVSTFAVN--YQGRPFRESLR 1082 (1160)
T ss_pred --HHHhhhhHHHHHhcCCcccccChh--------------cccChhhhhhHHHHHHHHHHHHHhhhh--ccCcchhhhhh
Confidence 22222221110 00000000110 011112223444444445565544222 23567877888
Q ss_pred cchHHHHHHHHHHHHHHHHH--hcccccccccccccCchhHHHHHHH----HHHHHHHHHHHHHHHh
Q 001877 916 SNLWLVASIILTMFLHILIL--YVPPLSVLFSVTPLSWADWTAVFYL----SFPVIIIDEVLKFFSR 976 (1001)
Q Consensus 916 ~n~~l~~~i~~~~~l~~~i~--~~p~~~~~f~~~~l~~~~w~~~~~~----~~~~l~~~e~~K~~~r 976 (1001)
.|+.+..+++.+..+.+.+. ..|-++..|.+.+++-.+=..++.+ .+++++++.+.|++-+
T Consensus 1083 eNK~l~y~ll~~~~~~~~l~tg~~peLn~~~~lV~mp~~fk~~ll~~l~lD~v~c~~~er~~~f~f~ 1149 (1160)
T KOG0209|consen 1083 ENKGLLYGLLGSAGVIIALATGSSPELNEKFELVDMPQDFKIKLLAVLVLDFVLCYLVERVLKFFFG 1149 (1160)
T ss_pred hccchHHHHHHHHHHHHHHHhccChhHHhheeeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999888877766555544 3556777888888875443333222 3445666666665433
No 25
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.9e-75 Score=674.62 Aligned_cols=506 Identities=28% Similarity=0.383 Sum_probs=425.8
Q ss_pred cchhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE-CCeEEEeeCCCCCCCcEEEecCCCccCCcEEEee
Q 001877 86 AFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLR-NGCFSILPAAELVPGDIVEVNVGCKIPADMRMIE 164 (1001)
Q Consensus 86 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~R-~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~ 164 (1001)
+|.++.++++++.+..+++.+...|+++++++|.++.|+++++++ ||++++|+.++|+|||+|.++|||+||+||+++
T Consensus 173 yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~- 251 (713)
T COG2217 173 YFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVV- 251 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEE-
Confidence 446778888899999999999999999999999999999998777 555999999999999999999999999999999
Q ss_pred ecCCceEEecccccCCCcccccchhhhcccccccCCCCceEEecceeecceEEEEEEEecccccchhHHHHhccCCCCCC
Q 001877 165 MLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVT 244 (1001)
Q Consensus 165 ~~~g~~~Vdes~LtGEs~pv~k~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~ 244 (1001)
+|...||||++||||.|+.|.+ ++.+++||.+.+|.....|+++|.+|.+++|.+.+++++.+++
T Consensus 252 --~G~s~vDeS~iTGEs~PV~k~~-------------Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka 316 (713)
T COG2217 252 --SGSSSVDESMLTGESLPVEKKP-------------GDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKA 316 (713)
T ss_pred --eCcEEeecchhhCCCCCEecCC-------------CCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCc
Confidence 4888999999999999999988 5679999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhHhhhh
Q 001877 245 PLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMAR 324 (1001)
Q Consensus 245 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~~~~l~~ 324 (1001)
|.|+..|+++.++++.+++++++.+++|...... ++...+..++++++.+|||+|.+++|++...+..+.++
T Consensus 317 ~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~~--------~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~ 388 (713)
T COG2217 317 PIQRLADRVASYFVPVVLVIAALTFALWPLFGGG--------DWETALYRALAVLVIACPCALGLATPTAILVGIGRAAR 388 (713)
T ss_pred hHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcCC--------cHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHh
Confidence 9999999999999998888888887766554321 12345778899999999999999999999999999999
Q ss_pred ccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEeccccCCCceeeeeecCcccCCCCccccCCCccccCCCCh
Q 001877 325 LNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQL 404 (1001)
Q Consensus 325 ~~i~~k~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (1001)
+|+++|+...+|.++++|+++||||||||+|+|.+.++...++ +.
T Consensus 389 ~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~-----------------------------------~e 433 (713)
T COG2217 389 RGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG-----------------------------------DE 433 (713)
T ss_pred CceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC-----------------------------------CH
Confidence 9999999999999999999999999999999999999876531 11
Q ss_pred HHHHHHHHHhcccccccccccCCCCcceeccCchHHHHHHHHHHcCCCCCCCcchhhhhhhhcccccccCccccccccEE
Q 001877 405 PCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKV 484 (1001)
Q Consensus 405 ~~~~~~~~~~~lc~~~~~~~~~~~~~~~~~~~~~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 484 (1001)
..++.++..+. ..+.||...|++++++..|..... ..
T Consensus 434 ~~~L~laAalE----------------~~S~HPiA~AIv~~a~~~~~~~~~---------------------------~~ 470 (713)
T COG2217 434 DELLALAAALE----------------QHSEHPLAKAIVKAAAERGLPDVE---------------------------DF 470 (713)
T ss_pred HHHHHHHHHHH----------------hcCCChHHHHHHHHHHhcCCCCcc---------------------------ce
Confidence 23344443321 123699999999999877622210 01
Q ss_pred EEecCCCCCceEEEEEeeCCeEEEEEeCChhHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhhhhhHHHHHHhc
Q 001877 485 SILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALK 564 (1001)
Q Consensus 485 ~~~~F~s~~k~msviv~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k 564 (1001)
..+| .+ .+-.+-+| ..+.-|++..+.+.-.. .+. ..+..+.+.. +|..++.+
T Consensus 471 ~~i~----G~--Gv~~~v~g--~~v~vG~~~~~~~~~~~-----------~~~-----~~~~~~~~~~-~G~t~v~v--- 522 (713)
T COG2217 471 EEIP----GR--GVEAEVDG--ERVLVGNARLLGEEGID-----------LPL-----LSERIEALES-EGKTVVFV--- 522 (713)
T ss_pred eeec----cC--cEEEEECC--EEEEEcCHHHHhhcCCC-----------ccc-----hhhhHHHHHh-cCCeEEEE---
Confidence 1111 11 11111123 34567888877542110 010 2223334443 55443333
Q ss_pred cCCcccccCccccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCccccccccccc
Q 001877 565 QMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT 644 (1001)
Q Consensus 565 ~l~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~ 644 (1001)
..|.+++|+++++|++|++++++|++||+.|++++|+|||+..+|+++|+++||+.
T Consensus 523 -------------a~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~----------- 578 (713)
T COG2217 523 -------------AVDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE----------- 578 (713)
T ss_pred -------------EECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh-----------
Confidence 35679999999999999999999999999999999999999999999999999976
Q ss_pred chhhccCChHHHHHhhccceEEEEeChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEEecCccHHHHhhcCee
Q 001877 645 ASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMV 724 (1001)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~~ad~v 724 (1001)
+++.+.|++|.++|+.+|++|++|+|||||.||+|+|.+||||||||.|+|.++++||++
T Consensus 579 --------------------v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvv 638 (713)
T COG2217 579 --------------------VRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVV 638 (713)
T ss_pred --------------------heccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEE
Confidence 788999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001877 725 LADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCI 765 (1001)
Q Consensus 725 ~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~ 765 (1001)
++++++..++.+++.+|.++.++++|+.|.+.+|.+.+...
T Consensus 639 L~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA 679 (713)
T COG2217 639 LMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLA 679 (713)
T ss_pred EecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999997755433
No 26
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=9.9e-72 Score=671.57 Aligned_cols=500 Identities=25% Similarity=0.347 Sum_probs=423.7
Q ss_pred cchhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEECCeEEEeeCCCCCCCcEEEecCCCccCCcEEEeee
Q 001877 86 AFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEM 165 (1001)
Q Consensus 86 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~~ 165 (1001)
.|.++.++++++.++.+++.+++.|+++.+++|.++.|.+++|+|||++++|++++|+|||+|.+++||+|||||++++
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~- 283 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLS- 283 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEE-
Confidence 4567788888999999999999999999999999999999999999999999999999999999999999999999995
Q ss_pred cCCceEEecccccCCCcccccchhhhcccccccCCCCceEEecceeecceEEEEEEEecccccchhHHHHhccCCCCCCc
Q 001877 166 LSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTP 245 (1001)
Q Consensus 166 ~~g~~~Vdes~LtGEs~pv~k~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~ 245 (1001)
|...||||+|||||.|+.|.+ ++.+|+||.+.+|.++++|+++|.+|.++++.+.+.+++.+++|
T Consensus 284 --g~~~vdes~lTGEs~Pv~k~~-------------Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~ 348 (741)
T PRK11033 284 --PFASFDESALTGESIPVERAT-------------GEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAP 348 (741)
T ss_pred --CcEEeecccccCCCCCEecCC-------------CCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCCh
Confidence 678999999999999999987 56799999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhHhhhhc
Q 001877 246 LKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARL 325 (1001)
Q Consensus 246 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~~~~l~~~ 325 (1001)
+++.+++++.+++++++++++++++++...+.. . +...+..++++++++|||+|.++++++...+..+++|+
T Consensus 349 ~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~~----~----~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~ 420 (741)
T PRK11033 349 IERFIDRFSRIYTPAIMLVALLVILVPPLLFAA----P----WQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARR 420 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC----C----HHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHC
Confidence 999999999999999999999888876433221 1 22345678899999999999999999999999999999
Q ss_pred cccccccccccccCCeeEEEeCCCCccccCceEEEEEEEeccccCCCceeeeeecCcccCCCCccccCCCccccCCCChH
Q 001877 326 NAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLP 405 (1001)
Q Consensus 326 ~i~~k~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (1001)
|+++|+.+++|+|+++|++|||||||||+|+|+|.++...++. ...
T Consensus 421 gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~----------------------------------~~~ 466 (741)
T PRK11033 421 GALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGI----------------------------------SES 466 (741)
T ss_pred CeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCC----------------------------------CHH
Confidence 9999999999999999999999999999999999998653210 112
Q ss_pred HHHHHHHHhcccccccccccCCCCcceeccCchHHHHHHHHHHcCCCCCCCcchhhhhhhhcccccccCccccccccEEE
Q 001877 406 CLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVS 485 (1001)
Q Consensus 406 ~~~~~~~~~~lc~~~~~~~~~~~~~~~~~~~~~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 485 (1001)
.+..++. ++. ....||.+.|+++++++.+..
T Consensus 467 ~~l~~aa--~~e--------------~~s~hPia~Ai~~~a~~~~~~--------------------------------- 497 (741)
T PRK11033 467 ELLALAA--AVE--------------QGSTHPLAQAIVREAQVRGLA--------------------------------- 497 (741)
T ss_pred HHHHHHH--HHh--------------cCCCCHHHHHHHHHHHhcCCC---------------------------------
Confidence 2222221 110 123699999999998876542
Q ss_pred EecCCCCCceEE---EEEeeCCeEEEEEeCChhHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhhhhhHHHHHH
Q 001877 486 ILEFSRDRKMMS---VLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALA 562 (1001)
Q Consensus 486 ~~~F~s~~k~ms---viv~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a 562 (1001)
+||.++++.+. +...-+++. +..|+++.+.+ ++ +.+.+.++++.. +|.+++.+|
T Consensus 498 -~~~~~~~~~~~g~Gv~~~~~g~~--~~ig~~~~~~~---------------~~----~~~~~~~~~~~~-~g~~~v~va 554 (741)
T PRK11033 498 -IPEAESQRALAGSGIEGQVNGER--VLICAPGKLPP---------------LA----DAFAGQINELES-AGKTVVLVL 554 (741)
T ss_pred -CCCCcceEEEeeEEEEEEECCEE--EEEecchhhhh---------------cc----HHHHHHHHHHHh-CCCEEEEEE
Confidence 23444444432 211223333 33578876643 11 123334556666 898888877
Q ss_pred hccCCcccccCccccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCccccccccc
Q 001877 563 LKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRS 642 (1001)
Q Consensus 563 ~k~l~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~ 642 (1001)
+ |.+++|+++++|++|++++++|++|+++|++++|+|||+..+|.++|+++|+.
T Consensus 555 ~----------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~---------- 608 (741)
T PRK11033 555 R----------------NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID---------- 608 (741)
T ss_pred E----------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC----------
Confidence 3 67899999999999999999999999999999999999999999999999995
Q ss_pred ccchhhccCChHHHHHhhccceEEEEeChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEEecCccHHHHhhcC
Q 001877 643 YTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASD 722 (1001)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~~ad 722 (1001)
.+++..|++|.++++.+|+. +.|+|+|||.||+|||++||||||||++++.++++||
T Consensus 609 ----------------------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~ad 665 (741)
T PRK11033 609 ----------------------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETAD 665 (741)
T ss_pred ----------------------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCC
Confidence 24557899999999999965 5899999999999999999999999999999999999
Q ss_pred eeecCCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 001877 723 MVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVC 764 (1001)
Q Consensus 723 ~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~ 764 (1001)
+++.++++.++..+++.||.++.|+++++.|.+.+|++.+..
T Consensus 666 ivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~ 707 (741)
T PRK11033 666 AALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVT 707 (741)
T ss_pred EEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999765443
No 27
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=8e-72 Score=653.13 Aligned_cols=491 Identities=43% Similarity=0.588 Sum_probs=423.3
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHh--cCCCcEEEEECCeEEEeeCCCCCCCcEEEecCCCccCCcEEEeeecCCceEE
Q 001877 95 LILAANAAVGVITETNAEKALEELRA--YQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRV 172 (1001)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~v~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~~~~g~~~V 172 (1001)
++++++.+++.++++++++..+.+.+ ..+.+++|+|+| +++|++++|+|||+|.+++||+|||||++++ |.+.|
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~---g~~~v 79 (499)
T TIGR01494 4 ILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLS---GSCFV 79 (499)
T ss_pred EhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEE---ccEEE
Confidence 45566778889999999999999988 788899999999 9999999999999999999999999999995 69999
Q ss_pred ecccccCCCcccccchhhhcccccccCCCCceEEecceeecceEEEEEEEecccccchhHHHHhccCCCCCCchHHHHHH
Q 001877 173 DQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDE 252 (1001)
Q Consensus 173 des~LtGEs~pv~k~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~ 252 (1001)
|||+|||||.|+.|.+ ++.+++||.+.+|...+.|+.+|.+|..+++...+......+++++++.++
T Consensus 80 des~LTGEs~pv~k~~-------------g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~ 146 (499)
T TIGR01494 80 DESNLTGESVPVLKTA-------------GDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDR 146 (499)
T ss_pred EcccccCCCCCeeecc-------------CCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHH
Confidence 9999999999999987 456899999999999999999999999999999998877778999999999
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhHhhhhccccccc
Q 001877 253 FG-TFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRS 331 (1001)
Q Consensus 253 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~i~~k~ 331 (1001)
+. .++++++++++++.++.+....... ..+...+..++++++.+|||+|++++++++..+..+++++|+++|+
T Consensus 147 ~~~~~~~~~~~~la~~~~~~~~~~~~~~------~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~ 220 (499)
T TIGR01494 147 LSDIIFILFVLLIALAVFLFWAIGLWDP------NSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRS 220 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccc------ccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEec
Confidence 98 6777777777776666554332110 0134567788999999999999999999999999999999999999
Q ss_pred cccccccCCeeEEEeCCCCccccCceEEEEEEEeccccCCCceeeeeecCcccCCCCccccCCCccccCCCChHHHHHHH
Q 001877 332 LPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIA 411 (1001)
Q Consensus 332 ~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (1001)
++.+|+||++|++|||||||||+|+|++.++++.+.
T Consensus 221 ~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~-------------------------------------------- 256 (499)
T TIGR01494 221 LNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG-------------------------------------------- 256 (499)
T ss_pred hhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC--------------------------------------------
Confidence 999999999999999999999999999999865310
Q ss_pred HHhcccccccccccCCCCcceeccCchHHHHHHHHHHcCCCCCCCcchhhhhhhhcccccccCccccccccEEEEecCCC
Q 001877 412 RCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSR 491 (1001)
Q Consensus 412 ~~~~lc~~~~~~~~~~~~~~~~~~~~~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s 491 (1001)
.+..+||.|.|++++++..+ +...||++
T Consensus 257 -------------------~~~s~hp~~~ai~~~~~~~~---------------------------------~~~~~f~~ 284 (499)
T TIGR01494 257 -------------------EYLSGHPDERALVKSAKWKI---------------------------------LNVFEFSS 284 (499)
T ss_pred -------------------CcCCCChHHHHHHHHhhhcC---------------------------------cceeccCC
Confidence 01236899999998875311 13579999
Q ss_pred CCceEEEEEeeCCeEEEEEeCChhHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCcccc
Q 001877 492 DRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQ 571 (1001)
Q Consensus 492 ~~k~msviv~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~l~~~~~ 571 (1001)
.+++|+++++.+++ .++||+++.+.+.|.+ +.+..++++. +|+|++++|++
T Consensus 285 ~~~~~~~~~~~~~~--~~~~G~~~~i~~~~~~-------------------~~~~~~~~~~-~g~~~~~~a~~------- 335 (499)
T TIGR01494 285 VRKRMSVIVRGPDG--TYVKGAPEFVLSRVKD-------------------LEEKVKELAQ-SGLRVLAVASK------- 335 (499)
T ss_pred CCceEEEEEecCCc--EEEeCCHHHHHHhhHH-------------------HHHHHHHHHh-CCCEEEEEEEC-------
Confidence 99999999986443 4789999999998852 1123334566 99999988853
Q ss_pred cCccccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccC
Q 001877 572 TLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEEL 651 (1001)
Q Consensus 572 ~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~ 651 (1001)
.+++|+++++|++|++++++|+.|+++|++++|+|||+..+|..+|+++|+
T Consensus 336 ---------~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-------------------- 386 (499)
T TIGR01494 336 ---------ETLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-------------------- 386 (499)
T ss_pred ---------CeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc--------------------
Confidence 269999999999999999999999999999999999999999999999986
Q ss_pred ChHHHHHhhccceEEEEeChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEEecCccHHHHhhcCeeecCCCch
Q 001877 652 PAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFA 731 (1001)
Q Consensus 652 ~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~~ad~v~~~~~~~ 731 (1001)
+++++|++|.++++.+|+.|+.|+|+|||.||+||+++||+||||+ ++++||+++.++++.
T Consensus 387 --------------~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~ 447 (499)
T TIGR01494 387 --------------FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLS 447 (499)
T ss_pred --------------eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHH
Confidence 4679999999999999999999999999999999999999999997 688999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHhhhhhh
Q 001877 732 TIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPAT 795 (1001)
Q Consensus 732 ~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~ 795 (1001)
.+..++++||+++.++++++.|.+++|+..+...+.+. .+|++++..+++
T Consensus 448 ~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~~--------------~~~~~~~~~~~~ 497 (499)
T TIGR01494 448 TIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALLA--------------VLNLVPPGLAAL 497 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHhcchhhh
Confidence 99999999999999999999999999988655544422 166666665554
No 28
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.4e-72 Score=631.85 Aligned_cols=561 Identities=22% Similarity=0.296 Sum_probs=454.2
Q ss_pred CcccchhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEECCe-EEEeeCCCCCCCcEEEecCCCccCCcEE
Q 001877 83 GLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGC-FSILPAAELVPGDIVEVNVGCKIPADMR 161 (1001)
Q Consensus 83 ~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~R~g~-~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ 161 (1001)
+...|-++.+++.++.+..+++.....|+..++..|..+.|.++.++.+|+ +++|+.+.|++||+|++.||++||+||+
T Consensus 337 ~~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~ 416 (951)
T KOG0207|consen 337 PPTFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGV 416 (951)
T ss_pred cchhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccE
Confidence 445677788888899999999999999999999999999999999999997 8999999999999999999999999999
Q ss_pred EeeecCCceEEecccccCCCcccccchhhhcccccccCCCCceEEecceeecceEEEEEEEecccccchhHHHHhccCCC
Q 001877 162 MIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTED 241 (1001)
Q Consensus 162 ll~~~~g~~~Vdes~LtGEs~pv~k~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~ 241 (1001)
++ .|+++||||++|||++||.|++ ++.+.+||.+.+|.....++.+|.+|.+++|.+++++++.
T Consensus 417 Vv---~Gss~VDEs~iTGEs~PV~Kk~-------------gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~ 480 (951)
T KOG0207|consen 417 VV---DGSSEVDESLITGESMPVPKKK-------------GSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQL 480 (951)
T ss_pred EE---eCceeechhhccCCceecccCC-------------CCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHc
Confidence 99 4889999999999999999987 5679999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--CCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhh
Q 001877 242 EVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFR--DPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGT 319 (1001)
Q Consensus 242 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~~ 319 (1001)
.+.|+|+.+|+++.++++.++++++..+++|..... ......|...+...|..++++++.+|||+|.++.|++...+.
T Consensus 481 sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvat 560 (951)
T KOG0207|consen 481 SKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVAT 560 (951)
T ss_pred ccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEe
Confidence 999999999999999999999999988888866543 122233456677888999999999999999999999999999
Q ss_pred HhhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEeccccCCCceeeeeecCcccCCCCccccCCCcccc
Q 001877 320 KRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLE 399 (1001)
Q Consensus 320 ~~l~~~~i~~k~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (1001)
...+++|+++|..+.+|.+.+++++.||||||||+|++.|.++....+.
T Consensus 561 gvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~------------------------------- 609 (951)
T KOG0207|consen 561 GVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNP------------------------------- 609 (951)
T ss_pred chhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCc-------------------------------
Confidence 9999999999999999999999999999999999999999998765311
Q ss_pred CCCChHHHHHHHHHhcccccccccccCCCCcceeccCchHHHHHHHHHHcCCCCCCCcchhhhhhhhcccccccCccccc
Q 001877 400 FPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEI 479 (1001)
Q Consensus 400 ~~~~~~~~~~~~~~~~lc~~~~~~~~~~~~~~~~~~~~~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (1001)
.....++.+.... +....||...|++++|++.......
T Consensus 610 --~~~~e~l~~v~a~----------------Es~SeHPig~AIv~yak~~~~~~~~------------------------ 647 (951)
T KOG0207|consen 610 --ISLKEALALVAAM----------------ESGSEHPIGKAIVDYAKEKLVEPNP------------------------ 647 (951)
T ss_pred --ccHHHHHHHHHHH----------------hcCCcCchHHHHHHHHHhcccccCc------------------------
Confidence 0111222222111 1223699999999999976511100
Q ss_pred cccEEEEecCCCCCceEEEEEeeCCeEEEEEeCChhHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhhhhhHHH
Q 001877 480 EFKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCL 559 (1001)
Q Consensus 480 ~~~~l~~~~F~s~~k~msviv~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l 559 (1001)
-..+..-.|.-+.+. +-++.+++. .+-|.-+.+.+ +|...+ +.+++.+++... .|..+.
T Consensus 648 -~~~~~~~~~pg~g~~--~~~~~~~~~--i~iGN~~~~~r---------~~~~~~------~~i~~~~~~~e~-~g~tvv 706 (951)
T KOG0207|consen 648 -EGVLSFEYFPGEGIY--VTVTVDGNE--VLIGNKEWMSR---------NGCSIP------DDILDALTESER-KGQTVV 706 (951)
T ss_pred -cccceeecccCCCcc--cceEEeeeE--EeechHHHHHh---------cCCCCc------hhHHHhhhhHhh-cCceEE
Confidence 001111112222222 212222222 55677776654 232222 224555555554 666555
Q ss_pred HHHhccCCcccccCccccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccc
Q 001877 560 ALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFV 639 (1001)
Q Consensus 560 ~~a~k~l~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~ 639 (1001)
.++ .|.+++|+++++|++|+|+..+|+.||+.|++++|+|||+..+|+++|+++|++.
T Consensus 707 ~v~----------------vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~~------ 764 (951)
T KOG0207|consen 707 YVA----------------VNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGIDN------ 764 (951)
T ss_pred EEE----------------ECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcce------
Confidence 444 4789999999999999999999999999999999999999999999999999765
Q ss_pred cccccchhhccCChHHHHHhhccceEEEEeChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEEecCccHHHHh
Q 001877 640 GRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKS 719 (1001)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~ 719 (1001)
|+|+..|+||.+.|+.+|+++..|+|||||.||+|+|.+||||||||.+++.|.+
T Consensus 765 -------------------------V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAie 819 (951)
T KOG0207|consen 765 -------------------------VYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIE 819 (951)
T ss_pred -------------------------EEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999
Q ss_pred hcCeeecCCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHH---HHHHHHHHhhhhhhh
Q 001877 720 ASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQ---LLWVNLVTDGLPATA 796 (1001)
Q Consensus 720 ~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~~~~~~---~l~~~~~~~~~p~~~ 796 (1001)
+||+|++.+++.+++.++..+|++..|+|.++.|++.+|+..+ ++..+.|+.++..+.||. .+..+.+...+-++.
T Consensus 820 aADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~I-pIAagvF~P~~~~L~Pw~A~lama~SSvsVv~sSll 898 (951)
T KOG0207|consen 820 AADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGI-PIAAGVFAPFGIVLPPWMASLAMAASSVSVVLSSLL 898 (951)
T ss_pred hCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hhheecccCCccccCchHHHHHHHhhhHHHhhhHHH
Confidence 9999999999999999999999999999999999999997643 344444554443344443 344455555555555
Q ss_pred hcccC
Q 001877 797 IGFNK 801 (1001)
Q Consensus 797 l~~~~ 801 (1001)
|-..+
T Consensus 899 Lk~~k 903 (951)
T KOG0207|consen 899 LKRYK 903 (951)
T ss_pred Hhhcc
Confidence 54443
No 29
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=7.9e-70 Score=641.41 Aligned_cols=509 Identities=27% Similarity=0.373 Sum_probs=422.0
Q ss_pred cchhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEECC-eEEEeeCCCCCCCcEEEecCCCccCCcEEEee
Q 001877 86 AFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNG-CFSILPAAELVPGDIVEVNVGCKIPADMRMIE 164 (1001)
Q Consensus 86 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~R~g-~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~ 164 (1001)
.|.++.+++++++++.+++.++++|+++.++++.+..+..++|+|+| ++++|++++|+|||+|.+++||+|||||++++
T Consensus 17 ~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~ 96 (556)
T TIGR01525 17 LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVIS 96 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEeccceEEEe
Confidence 46788899999999999999999999999999999999999999996 99999999999999999999999999999995
Q ss_pred ecCCceEEecccccCCCcccccchhhhcccccccCCCCceEEecceeecceEEEEEEEecccccchhHHHHhccCCCCCC
Q 001877 165 MLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVT 244 (1001)
Q Consensus 165 ~~~g~~~Vdes~LtGEs~pv~k~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~ 244 (1001)
|.+.||||+|||||.|+.|.+ ++.+|+||.+.+|+++++|+++|.+|++|++.+.+.+.+.+++
T Consensus 97 ---g~~~vdes~lTGEs~pv~k~~-------------g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~ 160 (556)
T TIGR01525 97 ---GESEVDESALTGESMPVEKKE-------------GDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEAQSSKA 160 (556)
T ss_pred ---cceEEeehhccCCCCCEecCC-------------cCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHHhhcCC
Confidence 678999999999999999986 5679999999999999999999999999999999999888999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhHhhhh
Q 001877 245 PLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMAR 324 (1001)
Q Consensus 245 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~~~~l~~ 324 (1001)
|+++.+++++.+++++++++++++++++...... ..+..++++++.+|||+|++++++++..+..++++
T Consensus 161 ~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~~-----------~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~ 229 (556)
T TIGR01525 161 PIQRLADRIASYYVPAVLAIALLTFVVWLALGAL-----------GALYRALAVLVVACPCALGLATPVAILVAIGVAAR 229 (556)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----------hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHH
Confidence 9999999999999998888888888776543210 45667889999999999999999999999999999
Q ss_pred ccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEeccccCCCceeeeeecCcccCCCCccccCCCccccCCCCh
Q 001877 325 LNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQL 404 (1001)
Q Consensus 325 ~~i~~k~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (1001)
+|+++|+++++|.||++|++|||||||||+|+|++.++...++.. ...
T Consensus 230 ~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~--------------------------------~~~ 277 (556)
T TIGR01525 230 RGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS--------------------------------ISE 277 (556)
T ss_pred CCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC--------------------------------ccH
Confidence 999999999999999999999999999999999999987542110 001
Q ss_pred HHHHHHHHHhcccccccccccCCCCcceeccCchHHHHHHHHHHcCCCCCCCcchhhhhhhhcccccccCccccccccEE
Q 001877 405 PCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKV 484 (1001)
Q Consensus 405 ~~~~~~~~~~~lc~~~~~~~~~~~~~~~~~~~~~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 484 (1001)
+.+..++. ++ . ....||.+.|+++++++.|.+... .+ ..
T Consensus 278 ~~~l~~a~--~~-e-------------~~~~hp~~~Ai~~~~~~~~~~~~~------------------------~~-~~ 316 (556)
T TIGR01525 278 EELLALAA--AL-E-------------QSSSHPLARAIVRYAKKRGLELPK------------------------QE-DV 316 (556)
T ss_pred HHHHHHHH--HH-h-------------ccCCChHHHHHHHHHHhcCCCccc------------------------cc-Ce
Confidence 22222211 11 1 113589999999999877643210 00 00
Q ss_pred EEecCCCCCceEEEEEeeCCeEEEEEeCChhHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhhhhhHHHHHHhc
Q 001877 485 SILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALK 564 (1001)
Q Consensus 485 ~~~~F~s~~k~msviv~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k 564 (1001)
..++ .+.++..+ ++. ..+..|+++.+ + + ++. . .....+.++.++. +|+|++.++
T Consensus 317 ~~~~----~~gi~~~~--~g~-~~~~lg~~~~~-~-~-------~~~--~-----~~~~~~~~~~~~~-~g~~~~~v~-- 370 (556)
T TIGR01525 317 EEVP----GKGVEATV--DGQ-EEVRIGNPRLL-E-L-------AAE--P-----ISASPDLLNEGES-QGKTVVFVA-- 370 (556)
T ss_pred eEec----CCeEEEEE--CCe-eEEEEecHHHH-h-h-------cCC--C-----chhhHHHHHHHhh-CCcEEEEEE--
Confidence 1111 11222222 110 23345665544 1 0 111 0 0112233445565 788776665
Q ss_pred cCCcccccCccccCCCcEEEEEecccCCCcHHHHHHHHHHHhCC-cEEEEEcCCCHHHHHHHHHHhCCCCcccccccccc
Q 001877 565 QMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAG-IRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSY 643 (1001)
Q Consensus 565 ~l~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~~g-i~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~ 643 (1001)
.|.+++|.+.++|+++|+++++|+.|+++| ++++|+|||+..++..+++++|+..
T Consensus 371 --------------~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~---------- 426 (556)
T TIGR01525 371 --------------VDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE---------- 426 (556)
T ss_pred --------------ECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe----------
Confidence 367899999999999999999999999999 9999999999999999999999964
Q ss_pred cchhhccCChHHHHHhhccceEEEEeChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEEecCccHHHHhhcCe
Q 001877 644 TASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDM 723 (1001)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~~ad~ 723 (1001)
+|+++.|++|.++++.++..++.|+|+|||.||++|+++||+||++|++++.+++.||+
T Consensus 427 ---------------------~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~ 485 (556)
T TIGR01525 427 ---------------------VHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADI 485 (556)
T ss_pred ---------------------eeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCE
Confidence 77889999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001877 724 VLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCI 765 (1001)
Q Consensus 724 v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~ 765 (1001)
++.++++..+.++++.||+++.++++++.|.+.+|++.+...
T Consensus 486 vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a 527 (556)
T TIGR01525 486 VLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLA 527 (556)
T ss_pred EEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998765433
No 30
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=3.4e-69 Score=631.34 Aligned_cols=489 Identities=26% Similarity=0.377 Sum_probs=411.4
Q ss_pred cchhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEECCeEEEeeCCCCCCCcEEEecCCCccCCcEEEeee
Q 001877 86 AFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEM 165 (1001)
Q Consensus 86 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~~ 165 (1001)
.|+++.+++++++++.+++.++++|+++.++++.+..+.+++|+|||+++++++++|+|||+|.+++||+|||||++++
T Consensus 17 ~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii~- 95 (536)
T TIGR01512 17 EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLS- 95 (536)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCCCEEEEcCCCEeecceEEEe-
Confidence 5788888999999999999999999999999999999999999999999999999999999999999999999999995
Q ss_pred cCCceEEecccccCCCcccccchhhhcccccccCCCCceEEecceeecceEEEEEEEecccccchhHHHHhccCCCCCCc
Q 001877 166 LSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTP 245 (1001)
Q Consensus 166 ~~g~~~Vdes~LtGEs~pv~k~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~ 245 (1001)
|.+.||||+|||||.|+.|++ ++.+|+||.+.+|+++++|++||.+|.+|++.+.+.+++.+++|
T Consensus 96 --g~~~vdes~lTGEs~pv~k~~-------------g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~ 160 (536)
T TIGR01512 96 --GTSTVDESALTGESVPVEKAP-------------GDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAK 160 (536)
T ss_pred --CcEEEEecccCCCCCcEEeCC-------------CCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHhhCCCh
Confidence 788999999999999999986 56799999999999999999999999999999999998889999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhHhhhhc
Q 001877 246 LKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARL 325 (1001)
Q Consensus 246 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~~~~l~~~ 325 (1001)
+++.+++++.++.+++++++++.++++..... + ...+..++++++.+|||+|++++++++..+..+++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~ 230 (536)
T TIGR01512 161 TQRFIDRFARYYTPVVLAIALAIWLVPGLLKR------W----PFWVYRALVLLVVASPCALVISAPAAYLSAISAAARH 230 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------c----HHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHC
Confidence 99999999999999988888887776643211 1 1156678899999999999999999999999999999
Q ss_pred cccccccccccccCCeeEEEeCCCCccccCceEEEEEEEeccccCCCceeeeeecCcccCCCCccccCCCccccCCCChH
Q 001877 326 NAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLP 405 (1001)
Q Consensus 326 ~i~~k~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (1001)
|+++|+++++|++|++|++|||||||||+|+|++.++...
T Consensus 231 gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~---------------------------------------- 270 (536)
T TIGR01512 231 GILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA---------------------------------------- 270 (536)
T ss_pred CeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH----------------------------------------
Confidence 9999999999999999999999999999999999887421
Q ss_pred HHHHHHHHhcccccccccccCCCCcceeccCchHHHHHHHHHHcCCCCCCCcchhhhhhhhcccccccCccccccccEEE
Q 001877 406 CLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVS 485 (1001)
Q Consensus 406 ~~~~~~~~~~lc~~~~~~~~~~~~~~~~~~~~~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 485 (1001)
.+..++. ++ . ....||.+.|+++++++.+ +. ....
T Consensus 271 ~~l~~a~--~~-e-------------~~~~hp~~~Ai~~~~~~~~-~~----------------------------~~~~ 305 (536)
T TIGR01512 271 EVLRLAA--AA-E-------------QASSHPLARAIVDYARKRE-NV----------------------------ESVE 305 (536)
T ss_pred HHHHHHH--HH-h-------------ccCCCcHHHHHHHHHHhcC-CC----------------------------cceE
Confidence 1112211 11 0 1235899999999987653 10 0011
Q ss_pred EecCCCCCceEEEEEeeCCeEEEEEeCChhHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhhhhhHHHHHHhcc
Q 001877 486 ILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQ 565 (1001)
Q Consensus 486 ~~~F~s~~k~msviv~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~ 565 (1001)
.+| .+.+...+ +++. +..|+++.+.+. +. + .+.. +|.+++.
T Consensus 306 ~~~----g~gi~~~~--~g~~--~~ig~~~~~~~~---------~~----~------------~~~~-~~~~~~~----- 346 (536)
T TIGR01512 306 EVP----GEGVRAVV--DGGE--VRIGNPRSLEAA---------VG----A------------RPES-AGKTIVH----- 346 (536)
T ss_pred Eec----CCeEEEEE--CCeE--EEEcCHHHHhhc---------CC----c------------chhh-CCCeEEE-----
Confidence 111 11222221 3332 335877654321 10 0 1222 4433222
Q ss_pred CCcccccCccccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCc-EEEEEcCCCHHHHHHHHHHhCCCCccccccccccc
Q 001877 566 MPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGI-RVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT 644 (1001)
Q Consensus 566 l~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi-~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~ 644 (1001)
...|..++|.+.++|+++|+++++|++|+++|+ +++|+|||+..++..+++++|+..
T Consensus 347 -----------v~~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~----------- 404 (536)
T TIGR01512 347 -----------VARDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE----------- 404 (536)
T ss_pred -----------EEECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh-----------
Confidence 245789999999999999999999999999999 999999999999999999999965
Q ss_pred chhhccCChHHHHHhhccceEEEEeChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEEec-CccHHHHhhcCe
Q 001877 645 ASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG-SGTAVAKSASDM 723 (1001)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIam~-~~~~~~~~~ad~ 723 (1001)
+|++..|++|.++++.++++++.|+|+|||.||++|++.||+||+|| ++++.++++||+
T Consensus 405 --------------------~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~ 464 (536)
T TIGR01512 405 --------------------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADV 464 (536)
T ss_pred --------------------hhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCE
Confidence 56778899999999999999999999999999999999999999999 889999999999
Q ss_pred eecCCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001877 724 VLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIF 766 (1001)
Q Consensus 724 v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~ 766 (1001)
++.++++..+.++++.||.++.++++++.|.+.+|++.+...+
T Consensus 465 vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~ 507 (536)
T TIGR01512 465 VLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILLAL 507 (536)
T ss_pred EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999976554433
No 31
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=7e-68 Score=621.88 Aligned_cols=492 Identities=26% Similarity=0.385 Sum_probs=410.1
Q ss_pred cchhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEC-CeEEEeeCCCCCCCcEEEecCCCccCCcEEEee
Q 001877 86 AFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRN-GCFSILPAAELVPGDIVEVNVGCKIPADMRMIE 164 (1001)
Q Consensus 86 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~R~-g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~ 164 (1001)
+|.++.++++++.++.+++.+.+.|+++.+++|.+..|++++++|+ |++++|+.++|+|||+|.+++||+|||||++++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 4455566677788888999999999999999999999999999985 667999999999999999999999999999995
Q ss_pred ecCCceEEecccccCCCcccccchhhhcccccccCCCCceEEecceeecceEEEEEEEecccccchhHHHHhccCCCCCC
Q 001877 165 MLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVT 244 (1001)
Q Consensus 165 ~~~g~~~Vdes~LtGEs~pv~k~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~ 244 (1001)
|++.||||+|||||.|+.|.+ ++.+|+||.+.+|.++++|+++|.+|.+|++.+.+.+++.+++
T Consensus 133 ---g~~~vdes~lTGEs~pv~k~~-------------gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~ 196 (562)
T TIGR01511 133 ---GESEVDESLVTGESLPVPKKV-------------GDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKA 196 (562)
T ss_pred ---CceEEehHhhcCCCCcEEcCC-------------CCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCC
Confidence 788999999999999999987 5679999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhHhhhh
Q 001877 245 PLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMAR 324 (1001)
Q Consensus 245 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~~~~l~~ 324 (1001)
|+++.+++++.++++++++++++.++++. ..+..++++++++|||+|++++++++..+..++++
T Consensus 197 ~~~~~~d~~a~~~~~~v~~~a~~~~~~~~----------------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~ 260 (562)
T TIGR01511 197 PIQRLADKVAGYFVPVVIAIALITFVIWL----------------FALEFAVTVLIIACPCALGLATPTVIAVATGLAAK 260 (562)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHH
Confidence 99999999999999988888877766542 24567899999999999999999999999999999
Q ss_pred ccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEeccccCCCceeeeeecCcccCCCCccccCCCccccCCCCh
Q 001877 325 LNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQL 404 (1001)
Q Consensus 325 ~~i~~k~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (1001)
+|+++|+++.+|.|+++|++|||||||||+|+|++.++...+.. ..
T Consensus 261 ~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~----------------------------------~~ 306 (562)
T TIGR01511 261 NGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDR----------------------------------DR 306 (562)
T ss_pred CCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCC----------------------------------CH
Confidence 99999999999999999999999999999999999998653210 11
Q ss_pred HHHHHHHHHhcccccccccccCCCCcceeccCchHHHHHHHHHHcCCCCCCCcchhhhhhhhcccccccCccccccccEE
Q 001877 405 PCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKV 484 (1001)
Q Consensus 405 ~~~~~~~~~~~lc~~~~~~~~~~~~~~~~~~~~~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 484 (1001)
+.+..++ .+++. ...||.+.|+++++++.+..... ....
T Consensus 307 ~~~l~~a--a~~e~--------------~s~HPia~Ai~~~~~~~~~~~~~-------------------------~~~~ 345 (562)
T TIGR01511 307 TELLALA--AALEA--------------GSEHPLAKAIVSYAKEKGITLVE-------------------------VSDF 345 (562)
T ss_pred HHHHHHH--HHHhc--------------cCCChHHHHHHHHHHhcCCCcCC-------------------------CCCe
Confidence 2222222 22221 12589999999999877643311 0001
Q ss_pred EEecCCCCCceEEEEEeeCCeEEEEEeCChhHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhhhhhHHHHHHhc
Q 001877 485 SILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALK 564 (1001)
Q Consensus 485 ~~~~F~s~~k~msviv~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k 564 (1001)
..+| .+.+...+ +++ -+..|+++.+.+. +. ..+ +... +|.+++.+
T Consensus 346 ~~~~----g~Gi~~~~--~g~--~~~iG~~~~~~~~---------~~--~~~------------~~~~-~g~~~~~~--- 390 (562)
T TIGR01511 346 KAIP----GIGVEGTV--EGT--KIQLGNEKLLGEN---------AI--KID------------GKAE-QGSTSVLV--- 390 (562)
T ss_pred EEEC----CceEEEEE--CCE--EEEEECHHHHHhC---------CC--CCC------------hhhh-CCCEEEEE---
Confidence 1111 12222222 232 3457888876431 11 011 0112 55444332
Q ss_pred cCCcccccCccccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCccccccccccc
Q 001877 565 QMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT 644 (1001)
Q Consensus 565 ~l~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~ 644 (1001)
..|.+++|.+.++|+++|+++++|++|++.|++++|+|||+..++..+++++|+.
T Consensus 391 -------------~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~------------ 445 (562)
T TIGR01511 391 -------------AVNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN------------ 445 (562)
T ss_pred -------------EECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc------------
Confidence 3578999999999999999999999999999999999999999999999999983
Q ss_pred chhhccCChHHHHHhhccceEEEEeChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEEecCccHHHHhhcCee
Q 001877 645 ASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMV 724 (1001)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~~ad~v 724 (1001)
++++..|++|.++++.++++++.|+|+|||.||++|++.||+||+||++++.++++||++
T Consensus 446 --------------------~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advv 505 (562)
T TIGR01511 446 --------------------VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVV 505 (562)
T ss_pred --------------------EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEE
Confidence 456678999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 001877 725 LADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVC 764 (1001)
Q Consensus 725 ~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~ 764 (1001)
+.++++..+..+++.||+++.++++++.|.+.+|++.+..
T Consensus 506 l~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~l 545 (562)
T TIGR01511 506 LMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPI 545 (562)
T ss_pred EeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999875433
No 32
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=5.7e-67 Score=644.56 Aligned_cols=505 Identities=25% Similarity=0.316 Sum_probs=421.6
Q ss_pred chhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEECCeEEEeeCCCCCCCcEEEecCCCccCCcEEEeeec
Q 001877 87 FLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEML 166 (1001)
Q Consensus 87 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~~~ 166 (1001)
|-++..+++++.+..+++.+.+.|+++.+++|.++.|++++++|+|++++|+.++|+|||+|.+++||+|||||++++
T Consensus 286 ~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~-- 363 (834)
T PRK10671 286 YEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQ-- 363 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEE--
Confidence 344677888889999999999999999999999999999999999999999999999999999999999999999995
Q ss_pred CCceEEecccccCCCcccccchhhhcccccccCCCCceEEecceeecceEEEEEEEecccccchhHHHHhccCCCCCCch
Q 001877 167 SNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPL 246 (1001)
Q Consensus 167 ~g~~~Vdes~LtGEs~pv~k~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l 246 (1001)
|.+.||||+|||||.|+.|++ ++.+|+||.+.+|.+.++|+++|.+|.++++.+.+.+++..++++
T Consensus 364 -g~~~vdeS~lTGEs~pv~k~~-------------gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~ 429 (834)
T PRK10671 364 -GEAWLDEAMLTGEPIPQQKGE-------------GDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEI 429 (834)
T ss_pred -ceEEEeehhhcCCCCCEecCC-------------CCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcH
Confidence 789999999999999999987 567999999999999999999999999999999999998889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhHhhhhcc
Q 001877 247 KKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLN 326 (1001)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ 326 (1001)
++..++++.++++++++++++.+++|...... ..+...+..++++++++|||+|++++++++..+..+++++|
T Consensus 430 ~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~~-------~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~g 502 (834)
T PRK10671 430 GQLADKISAVFVPVVVVIALVSAAIWYFFGPA-------PQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFG 502 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-------hHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCC
Confidence 99999999999999888888777766442211 11234567789999999999999999999999999999999
Q ss_pred ccccccccccccCCeeEEEeCCCCccccCceEEEEEEEeccccCCCceeeeeecCcccCCCCccccCCCccccCCCChHH
Q 001877 327 AIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPC 406 (1001)
Q Consensus 327 i~~k~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (1001)
+++|+.+.+|++|++|++|||||||||+|+|+|.++...+.. ....
T Consensus 503 ilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~----------------------------------~~~~ 548 (834)
T PRK10671 503 VLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGV----------------------------------DEAQ 548 (834)
T ss_pred eEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCC----------------------------------CHHH
Confidence 999999999999999999999999999999999987643210 1112
Q ss_pred HHHHHHHhcccccccccccCCCCcceeccCchHHHHHHHHHHcCCCCCCCcchhhhhhhhcccccccCccccccccEEEE
Q 001877 407 LLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSI 486 (1001)
Q Consensus 407 ~~~~~~~~~lc~~~~~~~~~~~~~~~~~~~~~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 486 (1001)
+..++ .+++.. ..||.+.|++++++....... .+++ .
T Consensus 549 ~l~~a--~~~e~~--------------s~hp~a~Ai~~~~~~~~~~~~------------------------~~~~---~ 585 (834)
T PRK10671 549 ALRLA--AALEQG--------------SSHPLARAILDKAGDMTLPQV------------------------NGFR---T 585 (834)
T ss_pred HHHHH--HHHhCC--------------CCCHHHHHHHHHHhhCCCCCc------------------------ccce---E
Confidence 22222 222221 258999999988763221100 0011 0
Q ss_pred ecCCCCCceEEEEEeeCCeEEEEEeCChhHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhhhhhHHHHHHhccC
Q 001877 487 LEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQM 566 (1001)
Q Consensus 487 ~~F~s~~k~msviv~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~l 566 (1001)
+| .+.+... .+++ .+.+|+++.+.+.. .. ++.+.+.++++.. +|.+++.++
T Consensus 586 ~~----g~Gv~~~--~~g~--~~~~G~~~~~~~~~-------------~~---~~~~~~~~~~~~~-~g~~~v~va---- 636 (834)
T PRK10671 586 LR----GLGVSGE--AEGH--ALLLGNQALLNEQQ-------------VD---TKALEAEITAQAS-QGATPVLLA---- 636 (834)
T ss_pred ec----ceEEEEE--ECCE--EEEEeCHHHHHHcC-------------CC---hHHHHHHHHHHHh-CCCeEEEEE----
Confidence 00 0111211 2333 34669999764321 11 1234445556665 787776666
Q ss_pred CcccccCccccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccch
Q 001877 567 PINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTAS 646 (1001)
Q Consensus 567 ~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~ 646 (1001)
.|..++|+++++|++||+++++|++|++.|++++|+|||+..++..+++++|+..
T Consensus 637 ------------~~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~------------- 691 (834)
T PRK10671 637 ------------VDGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE------------- 691 (834)
T ss_pred ------------ECCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE-------------
Confidence 3567999999999999999999999999999999999999999999999999964
Q ss_pred hhccCChHHHHHhhccceEEEEeChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEEecCccHHHHhhcCeeec
Q 001877 647 EFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLA 726 (1001)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~~ad~v~~ 726 (1001)
++++..|++|.++++.++.+++.|+|+|||.||++|++.||+||+||++++.++++||+++.
T Consensus 692 ------------------~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~ 753 (834)
T PRK10671 692 ------------------VIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLM 753 (834)
T ss_pred ------------------EEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEe
Confidence 77889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 001877 727 DDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVV 763 (1001)
Q Consensus 727 ~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~ 763 (1001)
++++.++..+++.||.++.++++++.+.+.+|++.+.
T Consensus 754 ~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~ 790 (834)
T PRK10671 754 RHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIP 790 (834)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999987654
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-58 Score=488.86 Aligned_cols=514 Identities=26% Similarity=0.354 Sum_probs=399.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEC-CeEEEeeCCCCCCCcEEEecCCCccCCcEEEeeecCCceEEecc
Q 001877 98 AANAAVGVITETNAEKALEELRAYQAD-IATVLRN-GCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQA 175 (1001)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~v~R~-g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~~~~g~~~Vdes 175 (1001)
++..+-+.+.|-|.+.+.+.|++.+.+ .++++++ |.++.+++.+|+.||+|++++||+||+||.+++ |...||||
T Consensus 77 lFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIe---G~asVdES 153 (681)
T COG2216 77 LFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIE---GVASVDES 153 (681)
T ss_pred HHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEe---eeeecchh
Confidence 334445556666777777777766544 4666766 899999999999999999999999999999996 78899999
Q ss_pred cccCCCcccccchhhhcccccccCCCCceEEecceeecceEEEEEEEecccccchhHHHHhccCCCCCCchHHHHHHHHH
Q 001877 176 ILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGT 255 (1001)
Q Consensus 176 ~LtGEs~pv~k~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~ 255 (1001)
.+||||.||.|+++.. ..-+-.||.+++...+..++....+|.+.++...++.+++++||-+-.+.-+..
T Consensus 154 AITGESaPViresGgD----------~ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~ 223 (681)
T COG2216 154 AITGESAPVIRESGGD----------FSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLS 223 (681)
T ss_pred hccCCCcceeeccCCC----------cccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHH
Confidence 9999999999987521 233789999999999999999999999999999999999999998877665544
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhHhhhhccccccccccc
Q 001877 256 FLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSV 335 (1001)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~i~~k~~~~~ 335 (1001)
-+..+.++....++- +..+.. .+ .......++++++.+|-.+.-.++..-..++.|+.+.+++.++..++
T Consensus 224 ~LTliFL~~~~Tl~p--~a~y~~---g~-----~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAV 293 (681)
T COG2216 224 GLTLIFLLAVATLYP--FAIYSG---GG-----AASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAV 293 (681)
T ss_pred HHHHHHHHHHHhhhh--HHHHcC---CC-----CcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchh
Confidence 333322222211111 111110 00 11234567889999999999999988889999999999999999999
Q ss_pred cccCCeeEEEeCCCCccccCceEEEEEEEeccccCCCceeeeeecCcccCCCCccccCCCccccCCCChHHHHHHHHHhc
Q 001877 336 ETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSA 415 (1001)
Q Consensus 336 e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (1001)
|..|.+|++..|||||+|-|+-.-.++.+.++. ..+.+.+.+...+
T Consensus 294 EaaGDvdtliLDKTGTIT~GnR~A~~f~p~~gv----------------------------------~~~~la~aa~lsS 339 (681)
T COG2216 294 EAAGDVDTLLLDKTGTITLGNRQASEFIPVPGV----------------------------------SEEELADAAQLAS 339 (681)
T ss_pred hhcCCccEEEecccCceeecchhhhheecCCCC----------------------------------CHHHHHHHHHHhh
Confidence 999999999999999999987666665554321 2223333333222
Q ss_pred ccccccccccCCCCcceeccCchHHHHHHHHHHcCCCCCCCcchhhhhhhhcccccccCccccccccEEEEecCCCCCce
Q 001877 416 LCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKM 495 (1001)
Q Consensus 416 lc~~~~~~~~~~~~~~~~~~~~~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~ 495 (1001)
+.. ..|.-..+++.|++.+.....+. .-......||+.+.|+
T Consensus 340 l~D----------------eTpEGrSIV~LA~~~~~~~~~~~----------------------~~~~~~fvpFtA~TRm 381 (681)
T COG2216 340 LAD----------------ETPEGRSIVELAKKLGIELREDD----------------------LQSHAEFVPFTAQTRM 381 (681)
T ss_pred hcc----------------CCCCcccHHHHHHHhccCCCccc----------------------ccccceeeecceeccc
Confidence 221 23555788999998885542110 0002345799988877
Q ss_pred EEEEEeeCCeEEEEEeCChhHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCcccccCcc
Q 001877 496 MSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQTLSY 575 (1001)
Q Consensus 496 msviv~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~l~~~~~~~~~ 575 (1001)
+.+-..++ .-.-|||.+.+.+..+.. +|. ..+.++...++.+. .|-..|+++
T Consensus 382 SGvd~~~~---~~irKGA~dai~~~v~~~----~g~-------~p~~l~~~~~~vs~-~GGTPL~V~------------- 433 (681)
T COG2216 382 SGVDLPGG---REIRKGAVDAIRRYVRER----GGH-------IPEDLDAAVDEVSR-LGGTPLVVV------------- 433 (681)
T ss_pred ccccCCCC---ceeecccHHHHHHHHHhc----CCC-------CCHHHHHHHHHHHh-cCCCceEEE-------------
Confidence 66655433 446799999999877531 121 12446667777776 777666654
Q ss_pred ccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHH
Q 001877 576 DDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQ 655 (1001)
Q Consensus 576 ~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~ 655 (1001)
.|.+++|.+.++|-++|+.+|-+.+||+.|||.+|+||||+.||..||++.|++.
T Consensus 434 ---~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd---------------------- 488 (681)
T COG2216 434 ---ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD---------------------- 488 (681)
T ss_pred ---ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh----------------------
Confidence 5789999999999999999999999999999999999999999999999999987
Q ss_pred HHHhhccceEEEEeChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEEecCccHHHHhhcCeeecCCCchHHHH
Q 001877 656 QTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVA 735 (1001)
Q Consensus 656 ~~~~~~~~~v~~r~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~~ad~v~~~~~~~~i~~ 735 (1001)
..|+++|++|.++++.-|.+|+.|+|+|||.||+|+|.+||||+||.+|++.||+++..|=+|.+...+.+
T Consensus 489 ---------fiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMNsGTqAAkEAaNMVDLDS~PTKlie 559 (681)
T COG2216 489 ---------FIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSNPTKLIE 559 (681)
T ss_pred ---------hhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhccccHHHHHhhcccccCCCccceeh
Confidence 56779999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001877 736 AVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVA 768 (1001)
Q Consensus 736 ~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~ 768 (1001)
.++-|+..+-.--....|++...++-.+.++-.
T Consensus 560 vV~IGKqlLiTRGaLTTFSIANDvAKYFaIiPA 592 (681)
T COG2216 560 VVEIGKQLLITRGALTTFSIANDVAKYFAIIPA 592 (681)
T ss_pred HhhhhhhheeecccceeeehhhHHHHHHHHHHH
Confidence 999999987666666667776666555544433
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=2.9e-34 Score=302.71 Aligned_cols=228 Identities=32% Similarity=0.526 Sum_probs=199.0
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHhcCCCc-EEEEECCeEEEeeCCCCCCCcEEEecCCCccCCcEEEeeecCCceE
Q 001877 93 ILLILAANAAVGVITETNAEKALEELRAYQADI-ATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLR 171 (1001)
Q Consensus 93 ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~v~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~~~~g~~~ 171 (1001)
++++++++.+++.++++|+++..+++++..+++ ++|+|||++++++++||+|||+|.|++||++||||++++ +|.++
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~--~g~~~ 79 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLE--SGSAY 79 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEE--SSEEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCcccee--ccccc
Confidence 566777788899999999999999999988887 999999999999999999999999999999999999996 69999
Q ss_pred EecccccCCCcccccchhhhcccccccCCCCceEEecceeecceEEEEEEEecccccchhHHHHhccCCCCCCchHHHHH
Q 001877 172 VDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLD 251 (1001)
Q Consensus 172 Vdes~LtGEs~pv~k~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~ 251 (1001)
||||.+|||+.|+.|.+. ..+.+|++|+||.+.+|.++++|++||.+|..|++.+...+++.+++++++.++
T Consensus 80 vd~s~ltGes~pv~k~~~--------~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~ 151 (230)
T PF00122_consen 80 VDESALTGESEPVKKTPL--------PLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLN 151 (230)
T ss_dssp EECHHHHSBSSEEEESSS--------CCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHH
T ss_pred cccccccccccccccccc--------cccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhH
Confidence 999999999999999853 445689999999999999999999999999999999999888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhHhhhhccccccc
Q 001877 252 EFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRS 331 (1001)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~i~~k~ 331 (1001)
++..++.+++++++++++++++.... . .++...+..++++++.++|++||+++++++..+++++.++|+++|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~ 224 (230)
T PF00122_consen 152 KIAKILIIIILAIAILVFIIWFFNDS---G----ISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKN 224 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCHTGST---T----CHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESS
T ss_pred HHHHHHHhcccccchhhhccceeccc---c----cccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeC
Confidence 99999998888888877766554211 1 1233456778899999999999999999999999999999999999
Q ss_pred cccccc
Q 001877 332 LPSVET 337 (1001)
Q Consensus 332 ~~~~e~ 337 (1001)
++++|+
T Consensus 225 ~~a~E~ 230 (230)
T PF00122_consen 225 LSALEA 230 (230)
T ss_dssp TTHHHH
T ss_pred cccccC
Confidence 999984
No 35
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=1.4e-31 Score=289.24 Aligned_cols=473 Identities=16% Similarity=0.202 Sum_probs=295.2
Q ss_pred eCChhHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhhhhhHHHHHHhccCCcc---------------------
Q 001877 511 KGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPIN--------------------- 569 (1001)
Q Consensus 511 KGa~e~i~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~l~~~--------------------- 569 (1001)
-|-.+.+.+.|+++|++ ..+.|++...+.++++.+.+... .| .++++|||+....
T Consensus 697 ~g~ad~~~eACTdfWdG--adi~PlSg~dkkkV~DFY~Racl-sG-~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI 772 (1354)
T KOG4383|consen 697 FGFADFFEEACTDFWDG--ADIIPLSGRDKKKVKDFYLRACL-SG-HCLAFAYKPCFCALASQLAGKCIELPLNPEHSKI 772 (1354)
T ss_pred ccHHHHHHHHhhhhcCC--ceeeecCcchHHHHHHHHHHHhh-cc-cchheecccHHHHHHHHhCCceEEeccCcccchh
Confidence 36668888999999987 56789999999999998888764 44 6999999984300
Q ss_pred -------------c------ccCcc------------ccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCC
Q 001877 570 -------------R------QTLSY------------DDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDN 618 (1001)
Q Consensus 570 -------------~------~~~~~------------~~e~~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~ 618 (1001)
+ .+..+ ..-.+.+|.|++....+.+++....|+.|.++.|+.+..|-.+
T Consensus 773 ~T~celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~Ed 852 (1354)
T KOG4383|consen 773 ETACELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKED 852 (1354)
T ss_pred hhhccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchH
Confidence 0 00000 0125789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCccccccc--------------------------------ccccchhhccCChH------------
Q 001877 619 KSTAESICHKIGAFDHLVDFVG--------------------------------RSYTASEFEELPAM------------ 654 (1001)
Q Consensus 619 ~~~a~~ia~~~gi~~~~~~~~~--------------------------------~~~~~~~~~~~~~~------------ 654 (1001)
+...+-+|+++|+.....+..+ ...+..+.+.+..+
T Consensus 853 ELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~ 932 (1354)
T KOG4383|consen 853 ELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKM 932 (1354)
T ss_pred HHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCcccccc
Confidence 9999999999999865433110 00011111000000
Q ss_pred ----------------------------HHHHhhccceEEEEeChhhHHHHHHHHhccCCEEEEEeCCccCH--HHHhcC
Q 001877 655 ----------------------------QQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDA--PALKKA 704 (1001)
Q Consensus 655 ----------------------------~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~--~~l~~A 704 (1001)
+.+....-+-+|..++|+.-.++++.+|++|++|+++|...|-- -.+-+|
T Consensus 933 dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflka 1012 (1354)
T KOG4383|consen 933 DSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKA 1012 (1354)
T ss_pred ccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEcc
Confidence 00011111347889999999999999999999999999998853 346889
Q ss_pred CceEEecC-------------ccHH-HHh-----------------hcCeeecCCCchHHHHHHHHhHHHHHHHHHHHHH
Q 001877 705 DIGIAMGS-------------GTAV-AKS-----------------ASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRY 753 (1001)
Q Consensus 705 ~vgIam~~-------------~~~~-~~~-----------------~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~ 753 (1001)
|++||+.. ++.. ..+ +.|+-........+..+|+.+|.....+|+++.|
T Consensus 1013 dISialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLF 1092 (1354)
T KOG4383|consen 1013 DISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLF 1092 (1354)
T ss_pred ceeEEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 99999841 1111 111 2233333444567888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHhhhhhhhhc----ccCCCccccccCCCCCCC-CccchHHHHH-H
Q 001877 754 MISSNIGEVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPATAIG----FNKQDSDVMKAKPRKVSE-AVVTGWLFFR-Y 827 (1001)
Q Consensus 754 ~~~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~l~----~~~~~~~~~~~~P~~~~~-~~~~~~~~~~-~ 827 (1001)
.++..+...+.+++..++..|..++..+++|.+++.. |.++++ -+++...+....|++.++ +-..+..|.. +
T Consensus 1093 iLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~--PlL~i~tL~gk~~hkSii~maagKNlqeIPKk~kh~fllcF 1170 (1354)
T KOG4383|consen 1093 ILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCI--PLLFIGTLFGKFEHKSIIIMAAGKNLQEIPKKEKHKFLLCF 1170 (1354)
T ss_pred HHHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHH--HHHHHHHHhcCCCccceEEeeccCChhhcccHHHHHHHHHH
Confidence 9999999999999999999999999999999999875 555544 233333333333332111 1122222222 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCCCcccccc--------ccccCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHH
Q 001877 828 LVIGAYVGVATVAGFIWWYVYSNEGPKLPYSELM--------NFDSCSTRETTHPCSIFEDRHPSTVSMTVLVVVEMFNA 899 (1001)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--------~~~~~~~~~~~~~~~~~~~~~~~ti~f~~lv~~~~~~~ 899 (1001)
++.....+..+.+.|.+..+.. .+.+....+.. +-++..-||++....+ ..++...-.-++...+|..
T Consensus 1171 ilkFsls~ssclIcFgf~L~af-cd~~~d~n~~nC~~~m~~S~ddqa~a~FedfangL---~saQkl~aa~iilH~ifiq 1246 (1354)
T KOG4383|consen 1171 ILKFSLSASSCLICFGFLLMAF-CDLMCDFNDINCLFNMDGSADDQALAEFEDFANGL---GSAQKLLAAEIILHIIFIQ 1246 (1354)
T ss_pred HHHhhhhHHHHHHHHHHHHHHh-hhhhccccccceeeccCCCcCcccchhHHHHHhhh---hhHHHHHHHHHHHHhheeE
Confidence 2221111122222222222211 11111111111 1111222333222111 1223333344455556666
Q ss_pred HHhcccCccccccCCCcchHHHHHHHH---HHHHHHHH-Hh--cccc-cccccccccCchhHHHHHHHHHHHHHHHHHHH
Q 001877 900 LNNLSENQSLLVIPPWSNLWLVASIIL---TMFLHILI-LY--VPPL-SVLFSVTPLSWADWTAVFYLSFPVIIIDEVLK 972 (1001)
Q Consensus 900 ~~~~~~~~s~~~~~~~~n~~l~~~i~~---~~~l~~~i-~~--~p~~-~~~f~~~~l~~~~w~~~~~~~~~~l~~~e~~K 972 (1001)
+.+.+.+++.++..+.+|.||-+.+-. ..+++..+ .. +... +.-|+....+..-|.+...+..++.+.+|++|
T Consensus 1247 IThih~tkpl~~ks~LsnLWwa~~i~~lLl~a~V~taldlQi~thrd~~VHfgldd~pLL~~~igcisi~iiVitNEiiK 1326 (1354)
T KOG4383|consen 1247 ITHIHCTKPLSFKSGLSNLWWAFPIKCLLLDAAVITALDLQIGTHRDRGVHFGLDDFPLLPLGIGCISICIIVITNEIIK 1326 (1354)
T ss_pred EEEEEEecchhhhcccchheeecccceeehhhHHHHHHhhhhhhccccceeeccccchhHHHHHHHHheeeeeehhhHHH
Confidence 667777788777767777776443221 11111111 11 1111 22356666677778877777777778899999
Q ss_pred HHHhhcccchhhhhhhccccCcccccccC
Q 001877 973 FFSRKSSGMRFKFWFRRHDILPKKEFHEK 1001 (1001)
Q Consensus 973 ~~~r~~~~~~~~~~~~~~~~~~~~~f~~k 1001 (1001)
. +..|+ |.|+|+++|++|+||
T Consensus 1327 i-------heIR~-~~R~QkRqK~eFdTK 1347 (1354)
T KOG4383|consen 1327 I-------HEIRQ-FTREQKRQKFEFDTK 1347 (1354)
T ss_pred H-------HHHHH-HHHHHHhhhheeccc
Confidence 7 44444 777888899999998
No 36
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.88 E-value=4.8e-22 Score=201.33 Aligned_cols=181 Identities=35% Similarity=0.582 Sum_probs=145.8
Q ss_pred CCChhHHHHHHHHHHHhhhhhhhhcccCCCccccccCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC
Q 001877 774 PDTLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMKAKPRKVSEAVVTGWLFFRYLVIGAYVGVATVAGFIWWYVYSNEGP 853 (1001)
Q Consensus 774 ~~~~~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 853 (1001)
|.|+++.|+||+|+++|.+|+++++.|++|+++|+||||++++++++++.+...+..|+++++++++.|++.....+.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~-- 78 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGW-- 78 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCS--
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcccc--
Confidence 679999999999999999999999999999999999999999999999998888888998888777766554432110
Q ss_pred CCccccccccccCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHHHHhcccCccccc-cCCCcchHHHHHHHHHHHHHH
Q 001877 854 KLPYSELMNFDSCSTRETTHPCSIFEDRHPSTVSMTVLVVVEMFNALNNLSENQSLLV-IPPWSNLWLVASIILTMFLHI 932 (1001)
Q Consensus 854 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ti~f~~lv~~~~~~~~~~~~~~~s~~~-~~~~~n~~l~~~i~~~~~l~~ 932 (1001)
..... .. ....++|++|.+++++|+++.+++|+++.+.+. .+.++|++++.++++++++++
T Consensus 79 ----~~~~~-----------~~---~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~ 140 (182)
T PF00689_consen 79 ----DEETN-----------ND---NLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQI 140 (182)
T ss_dssp ----SSHHH-----------TT---CHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHH
T ss_pred ----ccccc-----------hh---HHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHH
Confidence 00000 00 113468999999999999999999998888888 788899999999999999999
Q ss_pred HHHhcccccccccccccCchhHHHHHHHHHHHHHHHHHHHHH
Q 001877 933 LILYVPPLSVLFSVTPLSWADWTAVFYLSFPVIIIDEVLKFF 974 (1001)
Q Consensus 933 ~i~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~l~~~e~~K~~ 974 (1001)
++.|+|+++..|++.++++.+|+++++.+++.++++|++|++
T Consensus 141 ~i~~~P~~~~~f~~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 141 LIVYVPGLNRIFGTAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp HHHHSTTHHHHST----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred HHhcchhhHhhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 999999999999999999999999999999999999999985
No 37
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.84 E-value=3e-21 Score=201.90 Aligned_cols=97 Identities=48% Similarity=0.769 Sum_probs=92.0
Q ss_pred CcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHh
Q 001877 580 DLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVA 659 (1001)
Q Consensus 580 ~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (1001)
++.++|.+.+.|++++++.++|+.|+++|++++|+|||+..++..+++++||...
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~------------------------- 169 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS------------------------- 169 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE-------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc-------------------------
Confidence 7899999999999999999999999999999999999999999999999999553
Q ss_pred hccceEEEEe--ChhhH--HHHHHHHhccCCEEEEEeCCccCHHHHhcCC
Q 001877 660 LQHMALFTRV--EPSHK--RMLVEALQNQNEVVAMTGDGVNDAPALKKAD 705 (1001)
Q Consensus 660 ~~~~~v~~r~--~p~~K--~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~ 705 (1001)
.+++++ +|++| .++++.++.+++.|+|+|||.||++|+++||
T Consensus 170 ----~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 170 ----IVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp ----EEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred ----cccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 289999 99999 9999999977779999999999999999997
No 38
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.60 E-value=4.9e-15 Score=129.70 Aligned_cols=118 Identities=22% Similarity=0.329 Sum_probs=107.6
Q ss_pred CcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHh
Q 001877 580 DLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVA 659 (1001)
Q Consensus 580 ~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (1001)
-+...+.++---++-++++++|++|++. ++++++|||...+....|+-.|+....
T Consensus 18 ~~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~r------------------------ 72 (152)
T COG4087 18 AGKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVER------------------------ 72 (152)
T ss_pred cceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCceee------------------------
Confidence 3567788888899999999999999999 999999999999999999999987643
Q ss_pred hccceEEEEeChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEEe-c--CccHHHHhhcCeeecC
Q 001877 660 LQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAM-G--SGTAVAKSASDMVLAD 727 (1001)
Q Consensus 660 ~~~~~v~~r~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIam-~--~~~~~~~~~ad~v~~~ 727 (1001)
+++...|+.|.++++.|++.++.|.|+|||.||.+||++||+||.. + +.+..+..+||+++.+
T Consensus 73 -----v~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~ 138 (152)
T COG4087 73 -----VFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE 138 (152)
T ss_pred -----eecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh
Confidence 8888999999999999999999999999999999999999999984 4 6677788999999875
No 39
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.55 E-value=1e-14 Score=127.19 Aligned_cols=90 Identities=36% Similarity=0.593 Sum_probs=72.3
Q ss_pred cccccccccccCCCCcceeccCchHHHHHHHHHHcCCCCCCCcchhhhhhhhcccccccCccccccccEEEEecCCCCCc
Q 001877 415 ALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRK 494 (1001)
Q Consensus 415 ~lc~~~~~~~~~~~~~~~~~~~~~e~al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k 494 (1001)
++||++....+++.......|+|+|.||++++...|.... ....+..+++++.+||+|+||
T Consensus 1 ~LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~-------------------~~~~~~~~~~~~~~pF~S~rK 61 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGID-------------------IKEIRSKYKIVAEIPFDSERK 61 (91)
T ss_pred CCccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCc-------------------HHHHHhhcceeEEEccCcccc
Confidence 4799887765554444447899999999999999875432 012356899999999999999
Q ss_pred eEEEEEeeCCeEEEEEeCChhHHHHhhhh
Q 001877 495 MMSVLCSHKQMCVMFSKGAPESVLSRCTN 523 (1001)
Q Consensus 495 ~msviv~~~~~~~l~~KGa~e~i~~~c~~ 523 (1001)
||+|++++++...+|+|||||.|+++|++
T Consensus 62 ~msvv~~~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 62 RMSVVVRNDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred eeEEEEeCCCEEEEEcCCChHHHHHhcCC
Confidence 99999995456778999999999999985
No 40
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=99.49 E-value=7.7e-14 Score=115.25 Aligned_cols=69 Identities=33% Similarity=0.614 Sum_probs=66.1
Q ss_pred cccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHhcchHHHHHHHHHHHH
Q 001877 4 AYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVIS 72 (1001)
Q Consensus 4 ~~~~~~~~~~~~l~~~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~~i~~ 72 (1001)
||.+++++++++|+++..+||+++||++|+++||+|+++.+++.++|+.++++|.+|+++++++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 799999999999999999999999999999999999999999999999999999999999999999886
No 41
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.44 E-value=5.9e-13 Score=144.20 Aligned_cols=157 Identities=18% Similarity=0.221 Sum_probs=109.9
Q ss_pred CCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCc---cccccccccc----chhh---
Q 001877 579 KDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDH---LVDFVGRSYT----ASEF--- 648 (1001)
Q Consensus 579 ~~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~---~~~~~~~~~~----~~~~--- 648 (1001)
-|.|++.- ..++.+.+.++|++++++|++++++|||+...+..+++++|+..+ .+..+|..+. ++.+
T Consensus 10 lDGTLl~~---~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~~~~~i~~~ 86 (270)
T PRK10513 10 MDGTLLLP---DHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAADGETVAQT 86 (270)
T ss_pred cCCcCcCC---CCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECCCCCEEEec
Confidence 35566542 346999999999999999999999999999999999999998532 2222221110 0000
Q ss_pred ------------------------------------c--------------------cCC-------------hHHHHHh
Q 001877 649 ------------------------------------E--------------------ELP-------------AMQQTVA 659 (1001)
Q Consensus 649 ------------------------------------~--------------------~~~-------------~~~~~~~ 659 (1001)
. .+. .+.....
T Consensus 87 ~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~ 166 (270)
T PRK10513 87 ALSYDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFPKVMMIDEPEILDAA 166 (270)
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCceEEEEeCCHHHHHHH
Confidence 0 000 0000000
Q ss_pred ---hc-----cceE------EEEeCh--hhHHHHHHHHhcc----CCEEEEEeCCccCHHHHhcCCceEEecCccHHHHh
Q 001877 660 ---LQ-----HMAL------FTRVEP--SHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKS 719 (1001)
Q Consensus 660 ---~~-----~~~v------~~r~~p--~~K~~~v~~l~~~----~~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~ 719 (1001)
+. ...+ +...+| .+|...++.+.+. .+.|+++|||.||.+||+.|++||||+||.+.+|+
T Consensus 167 ~~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~ 246 (270)
T PRK10513 167 IARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKE 246 (270)
T ss_pred HHHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHH
Confidence 00 0011 112222 3688888777654 36799999999999999999999999999999999
Q ss_pred hcCeeecCCCchHHHHHHH
Q 001877 720 ASDMVLADDNFATIVAAVA 738 (1001)
Q Consensus 720 ~ad~v~~~~~~~~i~~~i~ 738 (1001)
.||+|+.+++.+|+.++|+
T Consensus 247 ~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 247 VAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred hcCeeccCCCcchHHHHHH
Confidence 9999999999999999985
No 42
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.42 E-value=9.5e-13 Score=142.53 Aligned_cols=157 Identities=17% Similarity=0.137 Sum_probs=110.8
Q ss_pred CCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCccccccccccc---chhh-------
Q 001877 579 KDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT---ASEF------- 648 (1001)
Q Consensus 579 ~~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~---~~~~------- 648 (1001)
-|.|++. -...+.+.++++|++++++|++++++|||+...+..+.+++|+..+.+..+|..+. +..+
T Consensus 9 lDGTLl~---~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~ 85 (272)
T PRK15126 9 MDGTLLM---PDHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPA 85 (272)
T ss_pred CCCcCcC---CCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCH
Confidence 3555553 13359999999999999999999999999999999999999987654433331110 0000
Q ss_pred --------------------------------------------------ccC------------ChHHHH---Hhh---
Q 001877 649 --------------------------------------------------EEL------------PAMQQT---VAL--- 660 (1001)
Q Consensus 649 --------------------------------------------------~~~------------~~~~~~---~~~--- 660 (1001)
..+ ..+... ..+
T Consensus 86 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~ 165 (272)
T PRK15126 86 DVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEA 165 (272)
T ss_pred HHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHH
Confidence 000 000000 000
Q ss_pred -c-cceE------EEEeChh--hHHHHHHHHhcc----CCEEEEEeCCccCHHHHhcCCceEEecCccHHHHhhcCe--e
Q 001877 661 -Q-HMAL------FTRVEPS--HKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDM--V 724 (1001)
Q Consensus 661 -~-~~~v------~~r~~p~--~K~~~v~~l~~~----~~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~~ad~--v 724 (1001)
. ...+ +...+|. +|...++.+.+. .+.|+++|||.||++||+.|+.||||||+.+.+|++||+ +
T Consensus 166 ~~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v 245 (272)
T PRK15126 166 LGERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPV 245 (272)
T ss_pred hcCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCee
Confidence 0 0111 1123332 688888888654 357999999999999999999999999999999999997 7
Q ss_pred ecCCCchHHHHHHH
Q 001877 725 LADDNFATIVAAVA 738 (1001)
Q Consensus 725 ~~~~~~~~i~~~i~ 738 (1001)
+.+++.+|+.++|+
T Consensus 246 ~~~n~edGva~~l~ 259 (272)
T PRK15126 246 IGHCRNQAVSHYLT 259 (272)
T ss_pred cCCCcchHHHHHHH
Confidence 88999999999985
No 43
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.42 E-value=9.5e-13 Score=141.92 Aligned_cols=147 Identities=25% Similarity=0.319 Sum_probs=109.3
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccch-hh-----------------------
Q 001877 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTAS-EF----------------------- 648 (1001)
Q Consensus 593 ~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~-~~----------------------- 648 (1001)
+.+.++++|+++++.|++++++|||+...+..+.+++|+..+.+..+|..+... +.
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~~ 100 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQG 100 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhccC
Confidence 999999999999999999999999999999999999999875554443111000 00
Q ss_pred -------------------------------------ccCC----------hHHHHH---hh----c-cceEEE------
Q 001877 649 -------------------------------------EELP----------AMQQTV---AL----Q-HMALFT------ 667 (1001)
Q Consensus 649 -------------------------------------~~~~----------~~~~~~---~~----~-~~~v~~------ 667 (1001)
.... .+.... .+ . ....+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~ 180 (264)
T COG0561 101 IALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPIS 180 (264)
T ss_pred ceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCce
Confidence 0000 000010 00 0 112222
Q ss_pred -EeCh--hhHHHHHHHHhcc-C---CEEEEEeCCccCHHHHhcCCceEEecCccHHHHhhcCeeecCCCchHHHHHHHH
Q 001877 668 -RVEP--SHKRMLVEALQNQ-N---EVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAE 739 (1001)
Q Consensus 668 -r~~p--~~K~~~v~~l~~~-~---~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~~ad~v~~~~~~~~i~~~i~~ 739 (1001)
...| .+|+..++.+.+. | +.|+++||+.||.+||+.|+.||||||+.+.+|+.||+++.+++.+|+.+++++
T Consensus 181 lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 181 LDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred EEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccchHHHHHHHH
Confidence 2233 3799888888763 3 469999999999999999999999999999999999999999999999999964
No 44
>PRK10976 putative hydrolase; Provisional
Probab=99.40 E-value=1.7e-12 Score=140.23 Aligned_cols=157 Identities=17% Similarity=0.165 Sum_probs=109.6
Q ss_pred CCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCccccccccccc---chhh-------
Q 001877 579 KDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT---ASEF------- 648 (1001)
Q Consensus 579 ~~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~---~~~~------- 648 (1001)
-|.||+.- ..++.+.+.++|++++++|++++++|||+...+..+.+++|+..+.+..+|..+. +..+
T Consensus 9 lDGTLl~~---~~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~l~~ 85 (266)
T PRK10976 9 LDGTLLSP---DHTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLIFSHNLDR 85 (266)
T ss_pred CCCCCcCC---CCcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCEehhhcCCH
Confidence 35555531 3358999999999999999999999999999999999999987654433331110 0000
Q ss_pred ----------------------------ccC------------------------------------ChHHHH---Hhhc
Q 001877 649 ----------------------------EEL------------------------------------PAMQQT---VALQ 661 (1001)
Q Consensus 649 ----------------------------~~~------------------------------------~~~~~~---~~~~ 661 (1001)
... ..++.. ..+.
T Consensus 86 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~ 165 (266)
T PRK10976 86 DIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHEKLLPLEQAIN 165 (266)
T ss_pred HHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHHHHHHHHHHHH
Confidence 000 000000 0000
Q ss_pred -----cceE------EEEeCh--hhHHHHHHHHhcc----CCEEEEEeCCccCHHHHhcCCceEEecCccHHHHhhcC--
Q 001877 662 -----HMAL------FTRVEP--SHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASD-- 722 (1001)
Q Consensus 662 -----~~~v------~~r~~p--~~K~~~v~~l~~~----~~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~~ad-- 722 (1001)
...+ +....| .+|...++.+.+. .+.|+++|||.||.+||+.|+.||||+||.+.+|+.||
T Consensus 166 ~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~ 245 (266)
T PRK10976 166 ARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPEL 245 (266)
T ss_pred HHhCCcEEEEEeCCceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCC
Confidence 0111 112223 2588878777553 36799999999999999999999999999999999988
Q ss_pred eeecCCCchHHHHHHH
Q 001877 723 MVLADDNFATIVAAVA 738 (1001)
Q Consensus 723 ~v~~~~~~~~i~~~i~ 738 (1001)
+|+.+++.+|+.++++
T Consensus 246 ~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 246 EVIGSNADDAVPHYLR 261 (266)
T ss_pred eecccCchHHHHHHHH
Confidence 7888999999999985
No 45
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.38 E-value=3.7e-12 Score=134.46 Aligned_cols=147 Identities=21% Similarity=0.257 Sum_probs=107.8
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccc-c---chhh-------------------
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSY-T---ASEF------------------- 648 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~-~---~~~~------------------- 648 (1001)
.+.+.+.++|++++++|++++++|||+...+..+++++|+..+....+|..+ . +..+
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRF 99 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhc
Confidence 3889999999999999999999999999999999999998765544443221 1 1000
Q ss_pred -------ccC---------------ChHHHHHhhcc----ceE-----EEEeChh--hHHHHHHHHhcc----CCEEEEE
Q 001877 649 -------EEL---------------PAMQQTVALQH----MAL-----FTRVEPS--HKRMLVEALQNQ----NEVVAMT 691 (1001)
Q Consensus 649 -------~~~---------------~~~~~~~~~~~----~~v-----~~r~~p~--~K~~~v~~l~~~----~~~v~~i 691 (1001)
... ..++....+.+ ..+ +....|. .|...++.+.+. .+.++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~ 179 (230)
T PRK01158 100 PEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAI 179 (230)
T ss_pred cccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEE
Confidence 000 00111111110 111 1233333 488888877653 3579999
Q ss_pred eCCccCHHHHhcCCceEEecCccHHHHhhcCeeecCCCchHHHHHHH
Q 001877 692 GDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVA 738 (1001)
Q Consensus 692 GDg~ND~~~l~~A~vgIam~~~~~~~~~~ad~v~~~~~~~~i~~~i~ 738 (1001)
||+.||.+|++.|++|+||+|+.+.+|+.||+|+.+++.+|+.++++
T Consensus 180 GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 180 GDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 99999999999999999999999999999999999999999999985
No 46
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.34 E-value=5.4e-12 Score=131.46 Aligned_cols=155 Identities=21% Similarity=0.203 Sum_probs=109.7
Q ss_pred CcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccc--hhh--ccCC---
Q 001877 580 DLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTA--SEF--EELP--- 652 (1001)
Q Consensus 580 ~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~--~~~--~~~~--- 652 (1001)
|.|++. =..++.+++.++|++|+++|++++++|||+...+..+++++++..+.+..+|..+.. ..+ ....
T Consensus 9 DGTLl~---~~~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~ 85 (215)
T TIGR01487 9 DGTLTE---PNRMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEW 85 (215)
T ss_pred CCCcCC---CCcccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchh
Confidence 555553 123489999999999999999999999999999999999999876555444422211 000 0000
Q ss_pred --------------------------------hHHHHHhhcc--ceE-----EEEeC--hhhHHHHHHHHhcc----CCE
Q 001877 653 --------------------------------AMQQTVALQH--MAL-----FTRVE--PSHKRMLVEALQNQ----NEV 687 (1001)
Q Consensus 653 --------------------------------~~~~~~~~~~--~~v-----~~r~~--p~~K~~~v~~l~~~----~~~ 687 (1001)
.+.....+.. ..+ +...+ ..+|...++.+.+. .+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~ 165 (215)
T TIGR01487 86 FLDEEKKKRFPRDRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEE 165 (215)
T ss_pred hHHHhhhhhhhhhhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHH
Confidence 0000000000 011 11222 34788888887653 346
Q ss_pred EEEEeCCccCHHHHhcCCceEEecCccHHHHhhcCeeecCCCchHHHHHH
Q 001877 688 VAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAV 737 (1001)
Q Consensus 688 v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~~ad~v~~~~~~~~i~~~i 737 (1001)
++++||+.||.+|++.|++|+||+|+.+.+|+.||+++.+++.+|+.+++
T Consensus 166 ~i~iGDs~ND~~ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 166 VAAIGDSENDIDLFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred EEEECCCHHHHHHHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhhC
Confidence 99999999999999999999999999999999999999999999988753
No 47
>PLN02887 hydrolase family protein
Probab=99.33 E-value=8e-12 Score=145.19 Aligned_cols=66 Identities=26% Similarity=0.395 Sum_probs=58.8
Q ss_pred hHHHHHHHHhcc----CCEEEEEeCCccCHHHHhcCCceEEecCccHHHHhhcCeeecCCCchHHHHHHH
Q 001877 673 HKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVA 738 (1001)
Q Consensus 673 ~K~~~v~~l~~~----~~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~~ad~v~~~~~~~~i~~~i~ 738 (1001)
+|+..++.+.+. .+.|+++|||.||++||+.|++|||||||.+.+|+.||+|+.+++.+||.++|+
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 566667666553 257999999999999999999999999999999999999999999999999985
No 48
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.30 E-value=1.4e-11 Score=132.14 Aligned_cols=148 Identities=20% Similarity=0.248 Sum_probs=107.6
Q ss_pred cCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccc-cch--hh------------------
Q 001877 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSY-TAS--EF------------------ 648 (1001)
Q Consensus 590 ~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~-~~~--~~------------------ 648 (1001)
...+.+++.++|++++++|++++++|||++..+..+.+++++..+.+..+|..+ ... .+
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 345889999999999999999999999999999999999999865554444222 000 00
Q ss_pred -----------------cc------------------------------------CChHH-------HHHhhccceEEE-
Q 001877 649 -----------------EE------------------------------------LPAMQ-------QTVALQHMALFT- 667 (1001)
Q Consensus 649 -----------------~~------------------------------------~~~~~-------~~~~~~~~~v~~- 667 (1001)
.. ...+. +.........+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 00 00000 001111111112
Q ss_pred ------EeCh--hhHHHHHHHHhcc----CCEEEEEeCCccCHHHHhcCCceEEecCccHHHHhhcCeeecCCCchHHHH
Q 001877 668 ------RVEP--SHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVA 735 (1001)
Q Consensus 668 ------r~~p--~~K~~~v~~l~~~----~~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~~ad~v~~~~~~~~i~~ 735 (1001)
.++| .+|...++.+.+. .+.++++||+.||.+||+.||.|+||+|+++.+++.||+++...+.+++++
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~ 252 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAK 252 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHH
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHH
Confidence 2333 4799988888753 468999999999999999999999999999999999999999888899988
Q ss_pred HH
Q 001877 736 AV 737 (1001)
Q Consensus 736 ~i 737 (1001)
+|
T Consensus 253 ~i 254 (254)
T PF08282_consen 253 AI 254 (254)
T ss_dssp HH
T ss_pred hC
Confidence 75
No 49
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.29 E-value=2.4e-11 Score=127.89 Aligned_cols=147 Identities=20% Similarity=0.247 Sum_probs=105.4
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccc-cchh----h-ccCC-------------
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSY-TASE----F-EELP------------- 652 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~-~~~~----~-~~~~------------- 652 (1001)
.+.+.+.++|++++++|++++++|||+...+..+++++|+..+.+..+|..+ .... . ..+.
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 4889999999999999999999999999999999999997655544333211 1000 0 0000
Q ss_pred -----------------------hHHHHHhhcc----ce-----EEEEeCh--hhHHHHHHHHhcc----CCEEEEEeCC
Q 001877 653 -----------------------AMQQTVALQH----MA-----LFTRVEP--SHKRMLVEALQNQ----NEVVAMTGDG 694 (1001)
Q Consensus 653 -----------------------~~~~~~~~~~----~~-----v~~r~~p--~~K~~~v~~l~~~----~~~v~~iGDg 694 (1001)
.+........ .. .+....| .+|...++.+.+. .+.++++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0000001110 00 1122233 3788888887653 3679999999
Q ss_pred ccCHHHHhcCCceEEecCccHHHHhhcCeeecCCCchH----HHHHHH
Q 001877 695 VNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFAT----IVAAVA 738 (1001)
Q Consensus 695 ~ND~~~l~~A~vgIam~~~~~~~~~~ad~v~~~~~~~~----i~~~i~ 738 (1001)
.||.+|++.|++|+||+|+.+.+|+.||+|+.+++.++ +.+.++
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 766663
No 50
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.27 E-value=2.1e-11 Score=132.30 Aligned_cols=157 Identities=20% Similarity=0.260 Sum_probs=108.5
Q ss_pred CCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCccccccccccc----chhh------
Q 001877 579 KDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT----ASEF------ 648 (1001)
Q Consensus 579 ~~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~----~~~~------ 648 (1001)
-|.|++. =..++.+.+.++|++++++|++++++|||+...+..+++++|+..+.+..+|..+. +..+
T Consensus 10 lDGTLl~---~~~~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~~~~l~~~~l~ 86 (272)
T PRK10530 10 LDGTLLT---PKKTILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAKKVLEADPLP 86 (272)
T ss_pred CCCceEC---CCCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCCCEEEEecCCC
Confidence 4666663 12358999999999999999999999999999999999999987554443331110 0000
Q ss_pred ------------------------------------------ccCCh---------HHHHHh------------------
Q 001877 649 ------------------------------------------EELPA---------MQQTVA------------------ 659 (1001)
Q Consensus 649 ------------------------------------------~~~~~---------~~~~~~------------------ 659 (1001)
..... .+....
T Consensus 87 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 166 (272)
T PRK10530 87 VQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAARQVNAIWKFALTHEDLP 166 (272)
T ss_pred HHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHhhcCCcEEEEEecCCHH
Confidence 00000 000000
Q ss_pred --------h-c--cceE------EEEeCh--hhHHHHHHHHhcc----CCEEEEEeCCccCHHHHhcCCceEEecCccHH
Q 001877 660 --------L-Q--HMAL------FTRVEP--SHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAV 716 (1001)
Q Consensus 660 --------~-~--~~~v------~~r~~p--~~K~~~v~~l~~~----~~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~ 716 (1001)
+ . ...+ +....| .+|...++.+.++ .+.++++||+.||.+|++.|++|+||||+.+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~ 246 (272)
T PRK10530 167 QLQHFAKHVEHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDA 246 (272)
T ss_pred HHHHHHHHHhhhcCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHH
Confidence 0 0 0000 011222 3577767665443 35799999999999999999999999999999
Q ss_pred HHhhcCeeecCCCchHHHHHHH
Q 001877 717 AKSASDMVLADDNFATIVAAVA 738 (1001)
Q Consensus 717 ~~~~ad~v~~~~~~~~i~~~i~ 738 (1001)
+|+.||+++.+++.+|+.++++
T Consensus 247 lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 247 VKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred HHHhCCEEEecCCCCcHHHHHH
Confidence 9999999999999999999985
No 51
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.18 E-value=2.2e-10 Score=122.71 Aligned_cols=147 Identities=20% Similarity=0.193 Sum_probs=101.5
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccc-cchh--------h--ccCChHHH-----
Q 001877 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSY-TASE--------F--EELPAMQQ----- 656 (1001)
Q Consensus 593 ~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~-~~~~--------~--~~~~~~~~----- 656 (1001)
..+.+.++|++++++|++++++|||+...+..+.+++|+..+.+..+|..+ .... + ..++.+..
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 455799999999999999999999999999999999998765555444222 1100 0 00000000
Q ss_pred ------------------------------------------------------HHhhcc--ceE-----EEEeCh--hh
Q 001877 657 ------------------------------------------------------TVALQH--MAL-----FTRVEP--SH 673 (1001)
Q Consensus 657 ------------------------------------------------------~~~~~~--~~v-----~~r~~p--~~ 673 (1001)
...+.+ ..+ +....| ..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 000000 000 111222 36
Q ss_pred HHHHHHHHhcc------CCEEEEEeCCccCHHHHhcCCceEEecCcc---HHHHhh--c-CeeecCCCchHHHHHHHH
Q 001877 674 KRMLVEALQNQ------NEVVAMTGDGVNDAPALKKADIGIAMGSGT---AVAKSA--S-DMVLADDNFATIVAAVAE 739 (1001)
Q Consensus 674 K~~~v~~l~~~------~~~v~~iGDg~ND~~~l~~A~vgIam~~~~---~~~~~~--a-d~v~~~~~~~~i~~~i~~ 739 (1001)
|...++.+.+. .+.++++||+.||.+|++.|++||||+|+. +.+|+. | ++|+.+++.+|+.+++++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~ 254 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEH 254 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHH
Confidence 77776666442 467999999999999999999999999997 478886 4 599999999999999863
No 52
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.16 E-value=1.4e-10 Score=124.51 Aligned_cols=147 Identities=22% Similarity=0.295 Sum_probs=104.7
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccc-cc--hhh-------------------
Q 001877 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSY-TA--SEF------------------- 648 (1001)
Q Consensus 591 d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~-~~--~~~------------------- 648 (1001)
.++.+++.++|++++++|++++++|||+...+..+.+++|+..+.+..+|..+ .. +.+
T Consensus 15 ~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i~~~~~~~i~~~~~~ 94 (256)
T TIGR00099 15 HTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPLDLDLVEEILNFLKK 94 (256)
T ss_pred CccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCCCHHHHHHHHHHHHH
Confidence 35889999999999999999999999999999999999998754433322111 00 000
Q ss_pred -------------------------------------ccC---------------ChH---HHHHhhc------cceE--
Q 001877 649 -------------------------------------EEL---------------PAM---QQTVALQ------HMAL-- 665 (1001)
Q Consensus 649 -------------------------------------~~~---------------~~~---~~~~~~~------~~~v-- 665 (1001)
... ..+ +....+. ...+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (256)
T TIGR00099 95 HGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDLDLLIEALNKLELEENVSVVS 174 (256)
T ss_pred cCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHHHHHHHHhhhhhhcCCEEEEE
Confidence 000 000 0000111 0111
Q ss_pred ----EEEeCh--hhHHHHHHHHhcc----CCEEEEEeCCccCHHHHhcCCceEEecCccHHHHhhcCeeecCCCchHHHH
Q 001877 666 ----FTRVEP--SHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVA 735 (1001)
Q Consensus 666 ----~~r~~p--~~K~~~v~~l~~~----~~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~~ad~v~~~~~~~~i~~ 735 (1001)
+....| .+|...++.+.+. .+.++++||+.||++|++.|++|+||+++.+.+|+.||+++.+++.+|+.+
T Consensus 175 s~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~ 254 (256)
T TIGR00099 175 SGPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVAL 254 (256)
T ss_pred ecCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhh
Confidence 112333 3688888887654 357999999999999999999999999999999999999999999999886
Q ss_pred HH
Q 001877 736 AV 737 (1001)
Q Consensus 736 ~i 737 (1001)
+|
T Consensus 255 ~l 256 (256)
T TIGR00099 255 AL 256 (256)
T ss_pred hC
Confidence 53
No 53
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.13 E-value=4.9e-10 Score=120.98 Aligned_cols=158 Identities=15% Similarity=0.101 Sum_probs=105.4
Q ss_pred CCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCC-Ccccccccccc-cchh--------
Q 001877 578 EKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAF-DHLVDFVGRSY-TASE-------- 647 (1001)
Q Consensus 578 e~~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~-~~~~~~~~~~~-~~~~-------- 647 (1001)
.-|.|++. . ...+.+.++++|++|+++|++++++|||+...+..+++++|+. .+.+..+|..+ ....
T Consensus 13 DlDGTLL~--~-~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~ 89 (271)
T PRK03669 13 DLDGTLLD--S-HTYDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFP 89 (271)
T ss_pred eCccCCcC--C-CCcCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCce
Confidence 34566653 1 3346788999999999999999999999999999999999985 34444444222 1100
Q ss_pred h--ccCChHHH-------------------------------------------------------------HHhhc--c
Q 001877 648 F--EELPAMQQ-------------------------------------------------------------TVALQ--H 662 (1001)
Q Consensus 648 ~--~~~~~~~~-------------------------------------------------------------~~~~~--~ 662 (1001)
. ..++.+.. ...+. .
T Consensus 90 ~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 169 (271)
T PRK03669 90 RIISGISHGEIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELG 169 (271)
T ss_pred EeecCCCHHHHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCC
Confidence 0 00000000 00000 0
Q ss_pred ceE-----EEEeCh--hhHHHHHHHHhc-------cCCEEEEEeCCccCHHHHhcCCceEEecCcc-HH-----HHhhcC
Q 001877 663 MAL-----FTRVEP--SHKRMLVEALQN-------QNEVVAMTGDGVNDAPALKKADIGIAMGSGT-AV-----AKSASD 722 (1001)
Q Consensus 663 ~~v-----~~r~~p--~~K~~~v~~l~~-------~~~~v~~iGDg~ND~~~l~~A~vgIam~~~~-~~-----~~~~ad 722 (1001)
..+ +....| .+|...++.+.+ ..+.|+++|||.||++||+.|++|||||++. +. .+..||
T Consensus 170 ~~~~~~~~~iEi~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~ 249 (271)
T PRK03669 170 LQFVQGARFWHVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARV 249 (271)
T ss_pred CEEEecCeeEEEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCce
Confidence 011 112233 367777777654 3467999999999999999999999999555 21 455799
Q ss_pred eeecCCCchHHHHHHH
Q 001877 723 MVLADDNFATIVAAVA 738 (1001)
Q Consensus 723 ~v~~~~~~~~i~~~i~ 738 (1001)
+++...+.+|+.++++
T Consensus 250 ~~~~~~~~~g~~~~l~ 265 (271)
T PRK03669 250 YRTQREGPEGWREGLD 265 (271)
T ss_pred EeccCCCcHHHHHHHH
Confidence 9999999999999885
No 54
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=99.12 E-value=1.2e-10 Score=94.73 Aligned_cols=61 Identities=36% Similarity=0.518 Sum_probs=57.1
Q ss_pred HhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHhcchHHHHHHHHHHHHHHH
Q 001877 15 FFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFL 75 (1001)
Q Consensus 15 ~l~~~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~~i~~~~~ 75 (1001)
.|+++++.||+++|+++|+++||+|+++.++++++|+.++++|.+|+.++++++++++++.
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~ 62 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALL 62 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 4788888899999999999999999999998889999999999999999999999999875
No 55
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.11 E-value=4.3e-10 Score=122.42 Aligned_cols=128 Identities=17% Similarity=0.282 Sum_probs=100.2
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccc---cccccccchhhccCChHHHHHhhccceEEEE
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVD---FVGRSYTASEFEELPAMQQTVALQHMALFTR 668 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 668 (1001)
++.|++.+.|+.|+++|+++.++||.....+..+.+++|+.....+ .....+++..... -
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~-----------------i 243 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLGD-----------------I 243 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCc-----------------c
Confidence 5799999999999999999999999998889999999998652211 0000111110000 0
Q ss_pred eChhhHHHHHHHHhcc----CCEEEEEeCCccCHHHHhcCCceEEecCccHHHHhhcCeeecCCCchHHHHHH
Q 001877 669 VEPSHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAV 737 (1001)
Q Consensus 669 ~~p~~K~~~v~~l~~~----~~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~~ad~v~~~~~~~~i~~~i 737 (1001)
+..+.|.+.++.+.++ .+.++++|||.||.+|++.||+|||| |+.+.+++.||+++...++++++.++
T Consensus 244 v~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~ 315 (322)
T PRK11133 244 VDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCIL 315 (322)
T ss_pred CCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHh
Confidence 2345788888877654 36899999999999999999999999 99999999999999999999998776
No 56
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.08 E-value=4.5e-10 Score=110.07 Aligned_cols=107 Identities=16% Similarity=0.235 Sum_probs=86.5
Q ss_pred HHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeChhhHHHHH
Q 001877 599 NAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLV 678 (1001)
Q Consensus 599 ~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v 678 (1001)
.+|+.|+++|+++.++|+.+...+..+.+.+|+...... + .-.|+....++
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~---------------------------~--kpkp~~~~~~~ 91 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHEG---------------------------I--KKKTEPYAQML 91 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEec---------------------------C--CCCHHHHHHHH
Confidence 579999999999999999999999999999999752210 0 11244445555
Q ss_pred HHHhccCCEEEEEeCCccCHHHHhcCCceEEecCccHHHHhhcCeeecCCCchHHH
Q 001877 679 EALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIV 734 (1001)
Q Consensus 679 ~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~~ad~v~~~~~~~~i~ 734 (1001)
+.++-..+.++++||+.||.+|++.|++++||+|+.+.+++.|++|+.+++.++.+
T Consensus 92 ~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~g~v 147 (169)
T TIGR02726 92 EEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARGGHGAV 147 (169)
T ss_pred HHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCCCCCHH
Confidence 55544457899999999999999999999999999999999999999876665543
No 57
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.03 E-value=1.2e-09 Score=111.27 Aligned_cols=127 Identities=15% Similarity=0.116 Sum_probs=99.3
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccc---ccc-ccccchhhccCChHHHHHhhccceEEE
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVD---FVG-RSYTASEFEELPAMQQTVALQHMALFT 667 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (1001)
++.|++.+.|+.+++.| +++++||-....+..+++++|+...... ..+ ..++|. ..
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~------------------~~- 127 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGY------------------QL- 127 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeECe------------------ee-
Confidence 57999999999999986 9999999999999999999999753211 000 111111 11
Q ss_pred EeChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEEecCccHHHHhhcCeeecCCCchHHHHHHHHh
Q 001877 668 RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEG 740 (1001)
Q Consensus 668 r~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~~ad~v~~~~~~~~i~~~i~~g 740 (1001)
..++.|...++.+++.+..+.++|||.||++|++.||+||++. +.+.++++||-...-.++..+..++.++
T Consensus 128 -~~~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~-ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 128 -RQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred -cCcchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEec-CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 3467899999999888878999999999999999999999995 5667777777666666778888777665
No 58
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.99 E-value=3e-09 Score=115.03 Aligned_cols=157 Identities=20% Similarity=0.211 Sum_probs=107.5
Q ss_pred CCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCccccccccccc-chh----------
Q 001877 579 KDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT-ASE---------- 647 (1001)
Q Consensus 579 ~~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~-~~~---------- 647 (1001)
-|.|++.- .+.+.+++.++|++|+++|++++++|||+...+..+++++|+..+....+|..+. ...
T Consensus 11 lDGTLl~~---~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~~~~~~~~~~ 87 (273)
T PRK00192 11 LDGTLLDH---HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNYFPFQPDGER 87 (273)
T ss_pred CcccCcCC---CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccccccCCcccc
Confidence 35555531 3457888999999999999999999999999999999999987655544443221 000
Q ss_pred ------hc--cCChHHH-------------------------------------HHh-----------------------
Q 001877 648 ------FE--ELPAMQQ-------------------------------------TVA----------------------- 659 (1001)
Q Consensus 648 ------~~--~~~~~~~-------------------------------------~~~----------------------- 659 (1001)
+. .++.+.. ...
T Consensus 88 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (273)
T PRK00192 88 LKGDYWVIELGPPYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFLWNGSEAAKERFEE 167 (273)
T ss_pred ccCCceEEEcCCCHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCceeecCchHHHHHHHH
Confidence 00 0000000 000
Q ss_pred -hc--cceE-----EEEeC-hhhHHHHHHHHhc----cC-CEEEEEeCCccCHHHHhcCCceEEecCccHHHH----hhc
Q 001877 660 -LQ--HMAL-----FTRVE-PSHKRMLVEALQN----QN-EVVAMTGDGVNDAPALKKADIGIAMGSGTAVAK----SAS 721 (1001)
Q Consensus 660 -~~--~~~v-----~~r~~-p~~K~~~v~~l~~----~~-~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~----~~a 721 (1001)
+. ...+ +.... +..|...++.+.+ .. +.|+++||+.||++|++.|++|+||+||.+.+| .+|
T Consensus 168 ~l~~~~~~~~~~~~~~ei~~~~~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a 247 (273)
T PRK00192 168 ALKRLGLKVTRGGRFLHLLGGGDKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIA 247 (273)
T ss_pred HHHHcCCEEEECCeEEEEeCCCCHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCcccc
Confidence 00 0000 11111 1267777776654 35 899999999999999999999999999999999 666
Q ss_pred -Ceee--cCCCchHHHHHHH
Q 001877 722 -DMVL--ADDNFATIVAAVA 738 (1001)
Q Consensus 722 -d~v~--~~~~~~~i~~~i~ 738 (1001)
+.++ ..++.+|++++++
T Consensus 248 ~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 248 DGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CCceEEecCCCcHHHHHHHH
Confidence 6877 6777899998885
No 59
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.97 E-value=2.6e-09 Score=104.18 Aligned_cols=105 Identities=20% Similarity=0.306 Sum_probs=84.6
Q ss_pred HHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeChhhHHHHHH
Q 001877 600 AMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVE 679 (1001)
Q Consensus 600 ~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~ 679 (1001)
+|++|+++|+++.++||++...+..+++++|+.... .. ...|.+.++
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~-------------------------------~~--~~~k~~~~~ 82 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLY-------------------------------QG--QSNKLIAFS 82 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEE-------------------------------ec--ccchHHHHH
Confidence 899999999999999999999999999999987521 10 123444444
Q ss_pred HH----hccCCEEEEEeCCccCHHHHhcCCceEEecCccHHHHhhcCeeecCCCchH-HHHHH
Q 001877 680 AL----QNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFAT-IVAAV 737 (1001)
Q Consensus 680 ~l----~~~~~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~~ad~v~~~~~~~~-i~~~i 737 (1001)
.+ .-..+.++++||+.||.+|++.|+++++|.++.+..+..||+++..+.-++ +.+++
T Consensus 83 ~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~ 145 (154)
T TIGR01670 83 DILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVC 145 (154)
T ss_pred HHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHH
Confidence 43 223568999999999999999999999999999999999999998776444 66555
No 60
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.94 E-value=5.4e-09 Score=110.55 Aligned_cols=155 Identities=17% Similarity=0.241 Sum_probs=103.0
Q ss_pred CcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCc--ccccccccc-cch----------
Q 001877 580 DLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDH--LVDFVGRSY-TAS---------- 646 (1001)
Q Consensus 580 ~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~--~~~~~~~~~-~~~---------- 646 (1001)
|.||+. +|+--++..++++ ++++|++++++|||+...+..+.+++++..+ .+..+|..+ ...
T Consensus 7 DgTLl~----~~~~~~~~~~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~~~~~~~~~ 81 (236)
T TIGR02471 7 DNTLLG----DDEGLASFVELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPELQPDRFWQK 81 (236)
T ss_pred cccccC----CHHHHHHHHHHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCCCCChhHHH
Confidence 455554 3332233346666 6999999999999999999999999998643 333333221 100
Q ss_pred hh-------------ccC--------------------Ch------HHHHHhhc----cce-EEE-----EeCh--hhHH
Q 001877 647 EF-------------EEL--------------------PA------MQQTVALQ----HMA-LFT-----RVEP--SHKR 675 (1001)
Q Consensus 647 ~~-------------~~~--------------------~~------~~~~~~~~----~~~-v~~-----r~~p--~~K~ 675 (1001)
.+ ..+ .. ++....+. ... +++ ...| ..|.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ei~~~~~~K~ 161 (236)
T TIGR02471 82 HIDHDWRRQAVVEALADIPGLTLQDDQEQGPFKISYLLDPEGEPILPQIRQRLRQQSQAAKVILSCGWFLDVLPLRASKG 161 (236)
T ss_pred HHhcCCCHHHHHHHHhcCCCcEeCChhcCCCeeEEEEECcccchHHHHHHHHHHhccCCEEEEEECCceEEEeeCCCChH
Confidence 00 000 00 00000111 000 111 2333 3788
Q ss_pred HHHHHHhcc-C---CEEEEEeCCccCHHHHhcCCceEEecCccHHHHhhcC----eeecCCCchHHHHHHHH
Q 001877 676 MLVEALQNQ-N---EVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASD----MVLADDNFATIVAAVAE 739 (1001)
Q Consensus 676 ~~v~~l~~~-~---~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~~ad----~v~~~~~~~~i~~~i~~ 739 (1001)
..++.+.++ | +.++++||+.||.+|++.|++||+|+|+.+.+|+.|| +|+..++..|+.++|++
T Consensus 162 ~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 162 LALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred HHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 888887654 2 3688999999999999999999999999999999999 88888889999999864
No 61
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.89 E-value=7.3e-09 Score=106.04 Aligned_cols=117 Identities=19% Similarity=0.245 Sum_probs=89.6
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccc----cccccccchhhccCChHHHHHhhccceEE
Q 001877 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVD----FVGRSYTASEFEELPAMQQTVALQHMALF 666 (1001)
Q Consensus 591 d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 666 (1001)
.++.|++.+.++.++++|.+|+++||-...-+..+|+++|++..... .+| .++|. +.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG-~ltG~------------------v~ 136 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG-KLTGR------------------VV 136 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC-EEece------------------ee
Confidence 68999999999999999999999999999999999999999865422 011 23332 33
Q ss_pred EE-eChhhHHHHHHHHhcc-C---CEEEEEeCCccCHHHHhcCCceEEecCccHHHHhhcCeeecC
Q 001877 667 TR-VEPSHKRMLVEALQNQ-N---EVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLAD 727 (1001)
Q Consensus 667 ~r-~~p~~K~~~v~~l~~~-~---~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~~ad~v~~~ 727 (1001)
.. +..+.|.+.++.+.+. | +.+.++|||.||.|||+.||.+|++. +.+..+..|+.....
T Consensus 137 g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n-~~~~l~~~a~~~~~~ 201 (212)
T COG0560 137 GPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN-PKPKLRALADVRIWP 201 (212)
T ss_pred eeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC-cCHHHHHHHHHhcCh
Confidence 22 4457899888766553 4 35899999999999999999999995 445555666655443
No 62
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.84 E-value=8.1e-09 Score=94.80 Aligned_cols=114 Identities=20% Similarity=0.341 Sum_probs=92.7
Q ss_pred HHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeChhhHHHHH
Q 001877 599 NAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLV 678 (1001)
Q Consensus 599 ~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v 678 (1001)
-.|+.+++.||++.++|||+..-++.-|+++||.... .--++|....
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~~---------------------------------qG~~dK~~a~ 88 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHLY---------------------------------QGISDKLAAF 88 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCceee---------------------------------echHhHHHHH
Confidence 4689999999999999999999999999999997632 3356787777
Q ss_pred HHHhcc----CCEEEEEeCCccCHHHHhcCCceEEecCccHHHHhhcCeeecCCC----chHHHHHHHHhHHHHH
Q 001877 679 EALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDN----FATIVAAVAEGRAIYN 745 (1001)
Q Consensus 679 ~~l~~~----~~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~~ad~v~~~~~----~~~i~~~i~~gR~~~~ 745 (1001)
+.|..+ -+.|+++||..||.|+|+..++++|+.++.+..++.||+|+.... ...+.++|..++..+.
T Consensus 89 ~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d 163 (170)
T COG1778 89 EELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLD 163 (170)
T ss_pred HHHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHH
Confidence 766543 468999999999999999999999999999999999999997654 3344555555554443
No 63
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.78 E-value=3e-08 Score=105.76 Aligned_cols=150 Identities=17% Similarity=0.169 Sum_probs=104.6
Q ss_pred cCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCc--ccccccccc-cch-h------------------
Q 001877 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDH--LVDFVGRSY-TAS-E------------------ 647 (1001)
Q Consensus 590 ~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~--~~~~~~~~~-~~~-~------------------ 647 (1001)
..+..|.+.+++++++++|+.++++|||+...++.+.+++++..+ .+..+|..+ .+. .
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 456889999999999999999999999999999999999998765 232233211 110 0
Q ss_pred h-------ccC-----------------ChHH----H---HHhhc----cceE-EE-----EeCh--hhHHHHHHHHhcc
Q 001877 648 F-------EEL-----------------PAMQ----Q---TVALQ----HMAL-FT-----RVEP--SHKRMLVEALQNQ 684 (1001)
Q Consensus 648 ~-------~~~-----------------~~~~----~---~~~~~----~~~v-~~-----r~~p--~~K~~~v~~l~~~ 684 (1001)
+ ..+ ..+. . ...+. +..+ .+ ...| ..|...++.+.+.
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 0 000 0000 0 11111 1111 11 2333 4788888888653
Q ss_pred ----CCEEEEEeCCccCHHHHhc-CCceEEecCccHHHHhhcC-------eeecCCCchHHHHHHHH
Q 001877 685 ----NEVVAMTGDGVNDAPALKK-ADIGIAMGSGTAVAKSASD-------MVLADDNFATIVAAVAE 739 (1001)
Q Consensus 685 ----~~~v~~iGDg~ND~~~l~~-A~vgIam~~~~~~~~~~ad-------~v~~~~~~~~i~~~i~~ 739 (1001)
.+.|+++||+.||++|++. ++.||+|+|+.+.+|+.++ ++.....-+|+++++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~ 245 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIAH 245 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHH
Confidence 4689999999999999998 6799999999999997654 77777788999988853
No 64
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.76 E-value=2.9e-08 Score=99.91 Aligned_cols=102 Identities=22% Similarity=0.278 Sum_probs=81.6
Q ss_pred HHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeChhhHHHHH
Q 001877 599 NAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLV 678 (1001)
Q Consensus 599 ~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v 678 (1001)
.+|+.|+++|+++.++||++...+..+++++|+.... . ..+.|...+
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f-------------------------------~--g~~~k~~~l 101 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLY-------------------------------Q--GQSNKLIAF 101 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceee-------------------------------c--CCCcHHHHH
Confidence 6899999999999999999999999999999986421 1 123455544
Q ss_pred HHHh-c---cCCEEEEEeCCccCHHHHhcCCceEEecCccHHHHhhcCeeecCCCchHH
Q 001877 679 EALQ-N---QNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATI 733 (1001)
Q Consensus 679 ~~l~-~---~~~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~~ad~v~~~~~~~~i 733 (1001)
+.+. + ..+.++||||+.||.+|++.|+++++++++.+..+..||+++....-.+.
T Consensus 102 ~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~ 160 (183)
T PRK09484 102 SDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGA 160 (183)
T ss_pred HHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCH
Confidence 4432 2 34689999999999999999999999998888999999999975544333
No 65
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.75 E-value=3.6e-08 Score=103.12 Aligned_cols=126 Identities=22% Similarity=0.300 Sum_probs=93.3
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCccccc---ccccccchhhccCChHHHHHhhccceEEEE
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDF---VGRSYTASEFEELPAMQQTVALQHMALFTR 668 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 668 (1001)
++.+++.+.++.|+++|+++.++||.....+..+.+.+|+....... .+..+++. +...
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~------------------~~~~ 146 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGL------------------VEGP 146 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEEE------------------ecCc
Confidence 58899999999999999999999999999999999999987532110 00000000 0001
Q ss_pred -eChhhHHHHHHHHhcc----CCEEEEEeCCccCHHHHhcCCceEEecCccHHHHhhcCeeecCCCchHHHHH
Q 001877 669 -VEPSHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAA 736 (1001)
Q Consensus 669 -~~p~~K~~~v~~l~~~----~~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~~ad~v~~~~~~~~i~~~ 736 (1001)
..+..|..+++.+.++ .+.+.++||+.||++|++.||++++++ +.+.++++||+++.+.++..+..+
T Consensus 147 ~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 147 IVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred ccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 1123366666655443 346889999999999999999999985 678888999999999988776643
No 66
>PLN02382 probable sucrose-phosphatase
Probab=98.55 E-value=3.9e-07 Score=103.34 Aligned_cols=157 Identities=15% Similarity=0.122 Sum_probs=101.4
Q ss_pred CCcEEEEEecccC--CCcHHHHHHH-HHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcc--cccccccc-cchh-----
Q 001877 579 KDLTFIGLVGMLD--PPREEVKNAM-LSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHL--VDFVGRSY-TASE----- 647 (1001)
Q Consensus 579 ~~l~~lG~i~~~d--~~~~~~~~~I-~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~--~~~~~~~~-~~~~----- 647 (1001)
-|.||+.- .| ++.+...+++ +++++.|+.++++|||++..+..+.++.++..+. +..+|..+ .+..
T Consensus 16 LDGTLL~~---~~~~~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~ 92 (413)
T PLN02382 16 LDHTMVDH---HDPENLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDH 92 (413)
T ss_pred CCCcCcCC---CCccchhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccCh
Confidence 35566632 13 4554555666 8999999999999999999999999999987763 11122100 0000
Q ss_pred ------------------hccC--------------------ChHH-------HHHhhc----cceE------EEEeCh-
Q 001877 648 ------------------FEEL--------------------PAMQ-------QTVALQ----HMAL------FTRVEP- 671 (1001)
Q Consensus 648 ------------------~~~~--------------------~~~~-------~~~~~~----~~~v------~~r~~p- 671 (1001)
...+ ..+. +...+. ++.+ +....|
T Consensus 93 ~w~~~l~~~w~~~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~ 172 (413)
T PLN02382 93 GWVEYLNKKWDREIVVEETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQ 172 (413)
T ss_pred hHHHHHhccCChhhHHHHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeC
Confidence 0000 0000 111110 1111 223444
Q ss_pred -hhHHHHHHHHhcc-------CCEEEEEeCCccCHHHHhcCC-ceEEecCccHHHHhhc--------Ceee-cCCCchHH
Q 001877 672 -SHKRMLVEALQNQ-------NEVVAMTGDGVNDAPALKKAD-IGIAMGSGTAVAKSAS--------DMVL-ADDNFATI 733 (1001)
Q Consensus 672 -~~K~~~v~~l~~~-------~~~v~~iGDg~ND~~~l~~A~-vgIam~~~~~~~~~~a--------d~v~-~~~~~~~i 733 (1001)
..|...++.+.+. .+.++++||+.||.+||+.|+ .||||+|+.+.+|+.+ +++. .+.+.+|+
T Consensus 173 g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI 252 (413)
T PLN02382 173 GAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGI 252 (413)
T ss_pred CCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHH
Confidence 3699988888654 358899999999999999999 7999999999999753 4443 35567899
Q ss_pred HHHHH
Q 001877 734 VAAVA 738 (1001)
Q Consensus 734 ~~~i~ 738 (1001)
.++++
T Consensus 253 ~~al~ 257 (413)
T PLN02382 253 IQAIG 257 (413)
T ss_pred HHHHH
Confidence 98885
No 67
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.51 E-value=7.2e-08 Score=91.63 Aligned_cols=103 Identities=17% Similarity=0.249 Sum_probs=79.0
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCccccccccc-------ccchhhccCChHHHHHhhccce
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRS-------YTASEFEELPAMQQTVALQHMA 664 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 664 (1001)
.+.|++++.++.||+.|.+|+++||.-..-+..+|.++||+..+...+... ...++....
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~pt------------- 154 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPT------------- 154 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCcc-------------
Confidence 478999999999999999999999999999999999999987544322211 111111111
Q ss_pred EEEEeChhhHHHHHHHHhcc--CCEEEEEeCCccCHHHHhcCCceEEec
Q 001877 665 LFTRVEPSHKRMLVEALQNQ--NEVVAMTGDGVNDAPALKKADIGIAMG 711 (1001)
Q Consensus 665 v~~r~~p~~K~~~v~~l~~~--~~~v~~iGDg~ND~~~l~~A~vgIam~ 711 (1001)
+...-|.++++.+++. -+.++|||||+||.+|+..|+.=|+.|
T Consensus 155 ----sdsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 155 ----SDSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred ----ccCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 2234799999999874 468999999999999999977767665
No 68
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.46 E-value=7e-07 Score=92.03 Aligned_cols=117 Identities=21% Similarity=0.219 Sum_probs=83.0
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeCh
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (1001)
++.|++.+.++.|+++|+++.++|+.....+..+++.+|+...... .+...+... .....+....|
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~----~~~~~~~g~----------~~p~~~~~~~~ 145 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSN----ELVFDEKGF----------IQPDGIVRVTF 145 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEE----EEEEcCCCe----------EecceeeEEcc
Confidence 5789999999999999999999999999999999999997642211 010000000 00001122446
Q ss_pred hhHHHHHHHHhcc----CCEEEEEeCCccCHHHHhcCCceEEecCccHHHHhhcC
Q 001877 672 SHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASD 722 (1001)
Q Consensus 672 ~~K~~~v~~l~~~----~~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~~ad 722 (1001)
..|.++++.+.+. .+.++++||+.||.+|++.||++++++......+.++|
T Consensus 146 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 146 DNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred ccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 6787777665443 35699999999999999999999999765555555555
No 69
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.46 E-value=7.1e-07 Score=93.01 Aligned_cols=51 Identities=12% Similarity=0.158 Sum_probs=43.4
Q ss_pred cCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCccccccc
Q 001877 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVG 640 (1001)
Q Consensus 590 ~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~ 640 (1001)
.+...+++.++|++++++|++++++|||++..+..+.+++|+..+.+..+|
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NG 63 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEPPFIVENG 63 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCC
Confidence 456677899999999999999999999999999999999998655444433
No 70
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.44 E-value=9.5e-07 Score=91.34 Aligned_cols=125 Identities=18% Similarity=0.228 Sum_probs=88.7
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEE--Ee
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT--RV 669 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--r~ 669 (1001)
++.|++.+.++.|+++ +++.++|+.....+..+.+++|+...... ......+. .+.. ..
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~--~~~~~~~~----------------~i~~~~~~ 128 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCH--SLEVDEDG----------------MITGYDLR 128 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcc--eEEECCCC----------------eEECcccc
Confidence 4579999999999999 99999999999999999999998642211 00000000 0000 02
Q ss_pred ChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEEecCccHHHHhhcCe-eecCCCchHHHHHH
Q 001877 670 EPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDM-VLADDNFATIVAAV 737 (1001)
Q Consensus 670 ~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~~ad~-v~~~~~~~~i~~~i 737 (1001)
.|+.|...++.++..++.++|+|||.||.+|.+.|++|++.+.........+++ ++. ++..+...+
T Consensus 129 ~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~~--~~~el~~~l 195 (205)
T PRK13582 129 QPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAVH--TYDELLAAI 195 (205)
T ss_pred ccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCcccccC--CHHHHHHHH
Confidence 367888888988888889999999999999999999999887544444445555 332 344454444
No 71
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.42 E-value=1.7e-06 Score=90.53 Aligned_cols=48 Identities=21% Similarity=0.237 Sum_probs=40.8
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCC-Cccccccc
Q 001877 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAF-DHLVDFVG 640 (1001)
Q Consensus 593 ~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~-~~~~~~~~ 640 (1001)
..+.+.++|++++++|++++++|||+...+..+.+.+|+. .+.+..+|
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NG 65 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENG 65 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCC
Confidence 4455999999999999999999999999999999999987 44444444
No 72
>PRK08238 hypothetical protein; Validated
Probab=98.41 E-value=5.6e-05 Score=87.09 Aligned_cols=99 Identities=20% Similarity=0.339 Sum_probs=74.6
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeCh
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (1001)
+++|++.+.+++++++|++++++|+.+...+..+++.+|+.+. ++..+.. .++.|
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~-------Vigsd~~------------------~~~kg 126 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG-------VFASDGT------------------TNLKG 126 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE-------EEeCCCc------------------cccCC
Confidence 4789999999999999999999999999999999999998322 1111110 12556
Q ss_pred hhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEEecCccHH
Q 001877 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAV 716 (1001)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~ 716 (1001)
+.|.+.++..... +.+.++||+.+|.+|++.|+-+++++.+...
T Consensus 127 ~~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l 170 (479)
T PRK08238 127 AAKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVGASPGV 170 (479)
T ss_pred chHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEECCCHHH
Confidence 6776655533222 2256789999999999999999999855443
No 73
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.25 E-value=5.6e-06 Score=86.64 Aligned_cols=51 Identities=10% Similarity=0.135 Sum_probs=44.4
Q ss_pred cCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCccccccc
Q 001877 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVG 640 (1001)
Q Consensus 590 ~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~ 640 (1001)
++...+.+.++|++|+++||.++++||+.......+.+++|+..+.+..||
T Consensus 16 ~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNG 66 (302)
T PRK12702 16 EFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHPFICEDG 66 (302)
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeCC
Confidence 345778899999999999999999999999999999999999866555444
No 74
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.24 E-value=2.4e-06 Score=87.24 Aligned_cols=92 Identities=23% Similarity=0.312 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeChh-h
Q 001877 595 EEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPS-H 673 (1001)
Q Consensus 595 ~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~-~ 673 (1001)
+++.+.|+.++++|++++++||.....+.++++.+|+.......+.. .... ......+.++. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~-~~~~---------------~~~~~~~~~~~~~ 155 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL-FDNG---------------GGIFTGRITGSNC 155 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE-ECTT---------------CCEEEEEEEEEEE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee-eecc---------------cceeeeeECCCCC
Confidence 78889999999999999999999999999999999998632111111 0000 12244555554 4
Q ss_pred --HHHHHHHH------hccCCEEEEEeCCccCHHHHh
Q 001877 674 --KRMLVEAL------QNQNEVVAMTGDGVNDAPALK 702 (1001)
Q Consensus 674 --K~~~v~~l------~~~~~~v~~iGDg~ND~~~l~ 702 (1001)
|...++.+ +.....++++|||.||.+|||
T Consensus 156 ~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 156 GGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp SHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred CcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 99999999 345789999999999999986
No 75
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.23 E-value=9.6e-06 Score=84.23 Aligned_cols=111 Identities=19% Similarity=0.155 Sum_probs=77.9
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEE--E-
Q 001877 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALF--T- 667 (1001)
Q Consensus 591 d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~- 667 (1001)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++..... ..+...+.+..+.... +....+ .
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i-~~n~~~~~~~~~~~~~--------p~~~~~~~~~ 139 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRI-YCNEADFSNEYIHIDW--------PHPCDGTCQN 139 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccE-EeceeEeeCCeeEEeC--------CCCCcccccc
Confidence 468999999999999999999999999999999999887543221 1111122222111000 000000 0
Q ss_pred EeChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEEec
Q 001877 668 RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG 711 (1001)
Q Consensus 668 r~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIam~ 711 (1001)
.+ ...|..+++.++...+.+.|+|||.||..|++.||+.+|-+
T Consensus 140 ~c-g~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~ 182 (214)
T TIGR03333 140 QC-GCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD 182 (214)
T ss_pred CC-CCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH
Confidence 11 34699999998877788999999999999999999988754
No 76
>PTZ00174 phosphomannomutase; Provisional
Probab=98.21 E-value=7e-06 Score=87.24 Aligned_cols=54 Identities=22% Similarity=0.294 Sum_probs=45.8
Q ss_pred hhHHHHHHHHhccCCEEEEEeC----CccCHHHHhcC-CceEEecCccHHHHhhcCeee
Q 001877 672 SHKRMLVEALQNQNEVVAMTGD----GVNDAPALKKA-DIGIAMGSGTAVAKSASDMVL 725 (1001)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~iGD----g~ND~~~l~~A-~vgIam~~~~~~~~~~ad~v~ 725 (1001)
.+|+..++.|.+..+.|+++|| |.||.+||+.| -.|++++|+.+.+|..+.++.
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 4799999998877789999999 99999999976 577777899999998776543
No 77
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.17 E-value=9.4e-06 Score=94.48 Aligned_cols=46 Identities=7% Similarity=0.113 Sum_probs=39.9
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccc
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVD 637 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~ 637 (1001)
...+.+.++|++++++|+.++++|||+...+..+++++|+..+.+.
T Consensus 433 ~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~ 478 (694)
T PRK14502 433 YSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKDPFIT 478 (694)
T ss_pred ccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCeEEE
Confidence 3557889999999999999999999999999999999998644333
No 78
>PLN02954 phosphoserine phosphatase
Probab=98.13 E-value=1.5e-05 Score=83.65 Aligned_cols=119 Identities=18% Similarity=0.209 Sum_probs=79.9
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCc-ccccccccccchhhccCChHHHHHhhccceEEEE--
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDH-LVDFVGRSYTASEFEELPAMQQTVALQHMALFTR-- 668 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r-- 668 (1001)
++.|++.+.++.|+++|+++.++||.....+..+++.+|+... ... +......+ ..+.+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~-~~~~~~~~----------------g~~~g~~~ 146 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFA-NQILFGDS----------------GEYAGFDE 146 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEE-eEEEEcCC----------------CcEECccC
Confidence 4789999999999999999999999999999999999999631 111 00000000 000000
Q ss_pred ----eChhhHHHHHHHHhcc--CCEEEEEeCCccCHHHHhc--CCceEEecCc--cHHHHhhcCeeecC
Q 001877 669 ----VEPSHKRMLVEALQNQ--NEVVAMTGDGVNDAPALKK--ADIGIAMGSG--TAVAKSASDMVLAD 727 (1001)
Q Consensus 669 ----~~p~~K~~~v~~l~~~--~~~v~~iGDg~ND~~~l~~--A~vgIam~~~--~~~~~~~ad~v~~~ 727 (1001)
.....|.+.++.+.+. .+.++++||+.||+.|.+. ++++++.|.. .+.....+|+++.+
T Consensus 147 ~~~~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 215 (224)
T PLN02954 147 NEPTSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTD 215 (224)
T ss_pred CCcccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECC
Confidence 1123477777766553 3578999999999999888 4555555522 23345568998864
No 79
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.12 E-value=1.4e-05 Score=83.47 Aligned_cols=109 Identities=18% Similarity=0.162 Sum_probs=75.2
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceE--E-EE
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMAL--F-TR 668 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~-~r 668 (1001)
+++|++.+.++.|+++|+++.++||-....+..+.+++ +.......+...++++....-.. .... + .+
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp--------~p~~~~~~~~ 144 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWP--------HPCDEHCQNH 144 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEecc--------CCcccccccc
Confidence 68999999999999999999999999999999999988 64421111111122221110000 0000 0 00
Q ss_pred eChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEEe
Q 001877 669 VEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAM 710 (1001)
Q Consensus 669 ~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIam 710 (1001)
+ ...|..+++.++...+.+.++|||.||+.|.+.||+.++-
T Consensus 145 ~-~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~ 185 (219)
T PRK09552 145 C-GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFAR 185 (219)
T ss_pred C-CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeH
Confidence 1 1248889998887777899999999999999999997773
No 80
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.06 E-value=1.5e-05 Score=82.09 Aligned_cols=105 Identities=12% Similarity=0.118 Sum_probs=77.2
Q ss_pred cCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccc-c---ccccccchhhccCChHHHHHhhccceE
Q 001877 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVD-F---VGRSYTASEFEELPAMQQTVALQHMAL 665 (1001)
Q Consensus 590 ~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~v 665 (1001)
..++.+++.+.++.++++|++++++||.....+..+++.+|+...... . .....+|....
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~---------------- 148 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNIDG---------------- 148 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCccC----------------
Confidence 346899999999999999999999999999999999999998753211 0 00011111000
Q ss_pred EEEeChhhHHHHHHHHhc-cC---CEEEEEeCCccCHHHHhcCCceEEec
Q 001877 666 FTRVEPSHKRMLVEALQN-QN---EVVAMTGDGVNDAPALKKADIGIAMG 711 (1001)
Q Consensus 666 ~~r~~p~~K~~~v~~l~~-~~---~~v~~iGDg~ND~~~l~~A~vgIam~ 711 (1001)
-.+.++.|...++.+.+ .+ +.+.++||+.+|.+|++.|+.++++.
T Consensus 149 -~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 149 -NNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred -CCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 01345678887766543 33 37889999999999999999999986
No 81
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=98.04 E-value=2.3e-05 Score=83.95 Aligned_cols=138 Identities=12% Similarity=0.237 Sum_probs=86.9
Q ss_pred CCcHHHHHHHHHHHh-CCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccc------------cchh-----------
Q 001877 592 PPREEVKNAMLSCMT-AGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSY------------TASE----------- 647 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~-~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~------------~~~~----------- 647 (1001)
.+.+++.++|++|++ .|++++++|||+...+..+.+.+++. ....+|..+ ..+.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~--~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~ 113 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFP--LAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTA 113 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccce--EEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHH
Confidence 567899999999998 89999999999999999888776642 111111100 0000
Q ss_pred -------------------hccCC--hHHHHHh---hc----cce-----EEEEeCh--hhHHHHHHHHhcc----CCEE
Q 001877 648 -------------------FEELP--AMQQTVA---LQ----HMA-----LFTRVEP--SHKRMLVEALQNQ----NEVV 688 (1001)
Q Consensus 648 -------------------~~~~~--~~~~~~~---~~----~~~-----v~~r~~p--~~K~~~v~~l~~~----~~~v 688 (1001)
+.... .+..... +. ... -+..+.| .+|...++.+.+. .+.+
T Consensus 114 ~~~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v 193 (266)
T PRK10187 114 LAQLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTP 193 (266)
T ss_pred hccCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeE
Confidence 00000 0000000 00 011 1122333 4788888876543 3678
Q ss_pred EEEeCCccCHHHHhcC----CceEEecCccHHHHhhcCeeecCCCchHHHHHH
Q 001877 689 AMTGDGVNDAPALKKA----DIGIAMGSGTAVAKSASDMVLADDNFATIVAAV 737 (1001)
Q Consensus 689 ~~iGDg~ND~~~l~~A----~vgIam~~~~~~~~~~ad~v~~~~~~~~i~~~i 737 (1001)
+++||+.||.+||+.+ +.||+||++.+ .|++.+.+ ...+...+
T Consensus 194 ~~~GD~~nD~~mf~~~~~~~g~~vavg~a~~----~A~~~l~~--~~~v~~~L 240 (266)
T PRK10187 194 VFVGDDLTDEAGFAVVNRLGGISVKVGTGAT----QASWRLAG--VPDVWSWL 240 (266)
T ss_pred EEEcCCccHHHHHHHHHhcCCeEEEECCCCC----cCeEeCCC--HHHHHHHH
Confidence 9999999999999999 99999998753 46777763 45555554
No 82
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.01 E-value=3.1e-05 Score=81.33 Aligned_cols=127 Identities=21% Similarity=0.298 Sum_probs=87.9
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeC
Q 001877 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (1001)
Q Consensus 591 d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 670 (1001)
.++.|++.+.++.|++.|++++++||.....+..+.+++|+..... .++..+.... ..-.
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~~~----------------~kp~ 151 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFS----VVIGGDSLPN----------------KKPD 151 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCcc----EEEcCCCCCC----------------CCcC
Confidence 4578999999999999999999999999999999999999865321 1111111100 0011
Q ss_pred hhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCc-eEEec----CccHHHHhhcCeeecCCCchHHHHHHHH
Q 001877 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI-GIAMG----SGTAVAKSASDMVLADDNFATIVAAVAE 739 (1001)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~v-gIam~----~~~~~~~~~ad~v~~~~~~~~i~~~i~~ 739 (1001)
|+--..+++.++...+.++++||+.||+.|.+.||+ +|.+. +..+.....+|+++ +++..+...+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 152 PAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred hHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 333344555555556789999999999999999999 55553 22344455788887 456666666643
No 83
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.00 E-value=1.8e-05 Score=80.40 Aligned_cols=114 Identities=20% Similarity=0.220 Sum_probs=76.1
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEE-e
Q 001877 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR-V 669 (1001)
Q Consensus 591 d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r-~ 669 (1001)
-++.+++.+.++.|++.|+++.++|+.....+..+.+..|+...... +++.+...+- +........+...+.. .
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~----i~~~~~~~~~-~g~~~~~~~~~~~~~~~~ 145 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIE----IYSNPASFDN-DGRHIVWPHHCHGCCSCP 145 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeE----EeccCceECC-CCcEEEecCCCCccCcCC
Confidence 36889999999999999999999999999999999999998653211 1111110000 0000000000000111 1
Q ss_pred ChhhHHHHHHHHhcc-CCEEEEEeCCccCHHHHhcCCceEE
Q 001877 670 EPSHKRMLVEALQNQ-NEVVAMTGDGVNDAPALKKADIGIA 709 (1001)
Q Consensus 670 ~p~~K~~~v~~l~~~-~~~v~~iGDg~ND~~~l~~A~vgIa 709 (1001)
....|.++++.++++ .+.++++|||.||+.|.+.||+-.|
T Consensus 146 ~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 146 CGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 123589999998887 8899999999999999999987554
No 84
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.00 E-value=1.1e-05 Score=81.14 Aligned_cols=95 Identities=24% Similarity=0.286 Sum_probs=69.8
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCccccc-----ccccccchhhccCChHHHHHhhccceEEE
Q 001877 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDF-----VGRSYTASEFEELPAMQQTVALQHMALFT 667 (1001)
Q Consensus 593 ~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (1001)
++|++.+.++.+++.|++++++||.....+..+++.+|+....... ++ .+++.... + .
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g-~~~g~~~~------------~----~ 136 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNG-LLTGPIEG------------Q----V 136 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCC-EEeCccCC------------c----c
Confidence 5799999999999999999999999999999999999987422110 01 11111000 0 1
Q ss_pred EeChhhHHHHHHHHhcc----CCEEEEEeCCccCHHHHhcC
Q 001877 668 RVEPSHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKA 704 (1001)
Q Consensus 668 r~~p~~K~~~v~~l~~~----~~~v~~iGDg~ND~~~l~~A 704 (1001)
...+..|...++.+.++ .+.++++|||.||.+|++.|
T Consensus 137 ~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 137 NPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 14467899988887654 35789999999999999876
No 85
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.98 E-value=2.7e-05 Score=81.14 Aligned_cols=125 Identities=22% Similarity=0.318 Sum_probs=90.2
Q ss_pred cCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEe
Q 001877 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRV 669 (1001)
Q Consensus 590 ~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~ 669 (1001)
...+-|+++++++.|+++|++..++|+++...+..+.+..|+....... +.++.... ..-
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i----~g~~~~~~----------------~KP 146 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVI----VGGDDVPP----------------PKP 146 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceE----EcCCCCCC----------------CCc
Confidence 4567899999999999999999999999999999999999998754221 11111100 012
Q ss_pred ChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCC---ceEEecC--ccHHHHhhcCeeecCCCchHHHHH
Q 001877 670 EPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKAD---IGIAMGS--GTAVAKSASDMVLADDNFATIVAA 736 (1001)
Q Consensus 670 ~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~---vgIam~~--~~~~~~~~ad~v~~~~~~~~i~~~ 736 (1001)
.|.....+++.+....+.++||||..+|+.|-+.|+ +||..|. ........+|+++.+ ...+...
T Consensus 147 ~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~--~~el~~~ 216 (220)
T COG0546 147 DPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDS--LAELLAL 216 (220)
T ss_pred CHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECC--HHHHHHH
Confidence 345555666666655458999999999999999999 6666663 345566668998865 4444433
No 86
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.94 E-value=1.9e-05 Score=75.33 Aligned_cols=118 Identities=18% Similarity=0.126 Sum_probs=76.1
Q ss_pred cccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEE
Q 001877 588 GMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT 667 (1001)
Q Consensus 588 ~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (1001)
.-..++.+++.+.++.|+++|++++++||+....+...++++|+...... ++......................+.
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~----i~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDP----VITSNGAAIYYPKEGLFLGGGPFDIG 95 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhh----eeccchhhhhcccccccccccccccC
Confidence 34458999999999999999999999999999999999999998432211 11111000000000000011112233
Q ss_pred EeChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhc-CCceEE
Q 001877 668 RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKK-ADIGIA 709 (1001)
Q Consensus 668 r~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~-A~vgIa 709 (1001)
+-.++.+..+.+.+....+.++++||+.+|+.|++. ..-+|+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 96 KPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 444556666667666656789999999999999998 444443
No 87
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=97.92 E-value=5.5e-05 Score=80.08 Aligned_cols=68 Identities=21% Similarity=0.265 Sum_probs=49.1
Q ss_pred hhHHHHHHHHhcc----CCEEEEEeCCccCHHHHhcCCceEEecCccHH-----HHhhc---C-eeecCCCchHHHHHHH
Q 001877 672 SHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAV-----AKSAS---D-MVLADDNFATIVAAVA 738 (1001)
Q Consensus 672 ~~K~~~v~~l~~~----~~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~-----~~~~a---d-~v~~~~~~~~i~~~i~ 738 (1001)
.+|...++.++++ .+.|+++||+.||.+||..++-||.++|+.+. ..... . |......-.||+++++
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~ 243 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQ 243 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHH
Confidence 4799999999875 34678889999999999999999999999888 32222 2 4555666778888875
Q ss_pred H
Q 001877 739 E 739 (1001)
Q Consensus 739 ~ 739 (1001)
|
T Consensus 244 ~ 244 (247)
T PF05116_consen 244 H 244 (247)
T ss_dssp H
T ss_pred H
Confidence 4
No 88
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.82 E-value=8.2e-05 Score=76.79 Aligned_cols=124 Identities=18% Similarity=0.238 Sum_probs=84.3
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeCh
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (1001)
++.|++.+.++.|+++|+++.++||.+...+....+.+|+...... ++..++.. ..+-.|
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~----i~~~~~~~----------------~~KP~~ 134 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDH----VIGSDEVP----------------RPKPAP 134 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheee----EEecCcCC----------------CCCCCh
Confidence 6789999999999999999999999999999999999998653211 11111000 001123
Q ss_pred hhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEE-e--c--CccHHHHhhcCeeecCCCchHHHHHH
Q 001877 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA-M--G--SGTAVAKSASDMVLADDNFATIVAAV 737 (1001)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa-m--~--~~~~~~~~~ad~v~~~~~~~~i~~~i 737 (1001)
+--..+++.++-..+.+++|||+.+|+.+-+.||+... + | +..+..+..+|+++.+ ...+..++
T Consensus 135 ~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~--~~~l~~~~ 203 (205)
T TIGR01454 135 DIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRK--PQSLLALC 203 (205)
T ss_pred HHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCC--HHHHHHHh
Confidence 33344445555456789999999999999999999743 3 3 3334456678998754 44454443
No 89
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.75 E-value=0.00011 Score=75.73 Aligned_cols=39 Identities=21% Similarity=0.327 Sum_probs=36.3
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhC
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIG 630 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~g 630 (1001)
++.+++.++|++|++.|++++++|||....+..+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 588999999999999999999999999999999998854
No 90
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.65 E-value=0.00021 Score=77.07 Aligned_cols=125 Identities=11% Similarity=0.205 Sum_probs=82.0
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeC
Q 001877 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (1001)
Q Consensus 591 d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 670 (1001)
.++.|++.++++.|+++|++++++||.+...+..+.++.|+..... .++.+++... ..-.
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~----~i~~~d~~~~----------------~Kp~ 159 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFR----WIIGGDTLPQ----------------KKPD 159 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCe----EEEecCCCCC----------------CCCC
Confidence 4678999999999999999999999999999999998888854221 1111111000 0011
Q ss_pred hhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCce-EEecC----ccHHHHhhcCeeecCCCchHHHHHH
Q 001877 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG-IAMGS----GTAVAKSASDMVLADDNFATIVAAV 737 (1001)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vg-Iam~~----~~~~~~~~ad~v~~~~~~~~i~~~i 737 (1001)
|+--..+++.+.-..+.+++|||+.||+.|.+.||+. +++.. ..+.....+|+++. ++..+..++
T Consensus 160 p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el~~~~ 229 (272)
T PRK13223 160 PAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRALLPGC 229 (272)
T ss_pred cHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHHHHHH
Confidence 2222333444433457899999999999999999984 44432 22334457898884 455555444
No 91
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.59 E-value=0.00022 Score=74.19 Aligned_cols=116 Identities=16% Similarity=0.174 Sum_probs=78.5
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeCh
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (1001)
++.|++.+.++.|+++|+++.++|+.+...+..+.++.|+..... .++.++.... .+-.|
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~~~----------------~Kp~p 144 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFS----VLIGGDSLAQ----------------RKPHP 144 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCc----EEEecCCCCC----------------CCCCh
Confidence 578999999999999999999999999999999999999865321 1111111100 00112
Q ss_pred hhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEE-e--cCc--cHHHHhhcCeeecC
Q 001877 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA-M--GSG--TAVAKSASDMVLAD 727 (1001)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa-m--~~~--~~~~~~~ad~v~~~ 727 (1001)
+-=..+.+.+....+.++++||+.+|+.|.+.||+... + |.. .+.....||+++.+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~ 205 (213)
T TIGR01449 145 DPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDS 205 (213)
T ss_pred HHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCC
Confidence 22234444444445679999999999999999999854 4 321 22333468887754
No 92
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.57 E-value=0.00033 Score=72.85 Aligned_cols=124 Identities=21% Similarity=0.217 Sum_probs=83.1
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeCh
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (1001)
++.|++.+.++.|+++|+++.++||.....+..+.+.+|+..... .++..+.... .+-.|
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~----~i~~~~~~~~----------------~Kp~p 141 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFD----VVITLDDVEH----------------AKPDP 141 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhcee----EEEecCcCCC----------------CCCCc
Confidence 367999999999999999999999999999999999999875321 1111111100 01223
Q ss_pred hhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEE-e--cCc-cH-HHHhhcCeeecCCCchHHHHHH
Q 001877 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA-M--GSG-TA-VAKSASDMVLADDNFATIVAAV 737 (1001)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa-m--~~~-~~-~~~~~ad~v~~~~~~~~i~~~i 737 (1001)
+--.++++.+....+.+++|||+.+|+.+-++||+-.. + |.. .+ .....+|+++.+ +..+...+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~--~~~l~~~i 210 (214)
T PRK13288 142 EPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDK--MSDLLAIV 210 (214)
T ss_pred HHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECC--HHHHHHHH
Confidence 33344555555455789999999999999999999532 3 322 22 233458887653 55555544
No 93
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.52 E-value=0.00089 Score=70.67 Aligned_cols=129 Identities=13% Similarity=0.171 Sum_probs=86.2
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCccccc--c------cccccchhhccCChHHHHHhhcc
Q 001877 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDF--V------GRSYTASEFEELPAMQQTVALQH 662 (1001)
Q Consensus 591 d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~--~------~~~~~~~~~~~~~~~~~~~~~~~ 662 (1001)
-+++|++.+.++.|+++|+++.++||-....+..+.+++|+....... | ..+++|.. ..+
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~-~P~----------- 187 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFK-GPL----------- 187 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCC-CCc-----------
Confidence 367999999999999999999999999999999999999986443221 0 01111110 000
Q ss_pred ceEEEEeChhhHHHHHHH-----Hh--ccCCEEEEEeCCccCHHHHhcC---CceEEec--Ccc-----HHHHhhcCeee
Q 001877 663 MALFTRVEPSHKRMLVEA-----LQ--NQNEVVAMTGDGVNDAPALKKA---DIGIAMG--SGT-----AVAKSASDMVL 725 (1001)
Q Consensus 663 ~~v~~r~~p~~K~~~v~~-----l~--~~~~~v~~iGDg~ND~~~l~~A---~vgIam~--~~~-----~~~~~~ad~v~ 725 (1001)
+....|.+.+.. +. .....|+++|||.||+.|..-. .--+.+| |.. +.-+++=|+|+
T Consensus 188 ------i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl 261 (277)
T TIGR01544 188 ------IHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVL 261 (277)
T ss_pred ------ccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEE
Confidence 112356554432 22 2346788999999999995433 2334555 432 23456789999
Q ss_pred cCCCchHHHHHH
Q 001877 726 ADDNFATIVAAV 737 (1001)
Q Consensus 726 ~~~~~~~i~~~i 737 (1001)
.+|.--.++..|
T Consensus 262 ~~D~t~~v~~~i 273 (277)
T TIGR01544 262 VQDETLEVANSI 273 (277)
T ss_pred ECCCCchHHHHH
Confidence 988877777665
No 94
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.48 E-value=0.00035 Score=73.11 Aligned_cols=117 Identities=15% Similarity=0.128 Sum_probs=76.9
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeC
Q 001877 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (1001)
Q Consensus 591 d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 670 (1001)
-++.|++.++++.|+++|+++.++|+.....+..+.+++|+...... ++.+++... .+-.
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~----~~~~~~~~~----------------~Kp~ 150 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDA----LASAEKLPY----------------SKPH 150 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccE----EEEcccCCC----------------CCCC
Confidence 35789999999999999999999999999999999999998764311 111111100 0111
Q ss_pred hhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEEe-cC---ccHHHHhhcCeeecC
Q 001877 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAM-GS---GTAVAKSASDMVLAD 727 (1001)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIam-~~---~~~~~~~~ad~v~~~ 727 (1001)
|+-=..+.+.+.-..+.++++||+.||+.+.+.||+.... .. ..+.-...||+++.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~ 211 (222)
T PRK10826 151 PEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLES 211 (222)
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccC
Confidence 2222223333333346799999999999999999988653 22 211223356776644
No 95
>PRK11590 hypothetical protein; Provisional
Probab=97.45 E-value=0.00061 Score=70.52 Aligned_cols=106 Identities=13% Similarity=0.078 Sum_probs=74.3
Q ss_pred CCcHHHHHHH-HHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceE-EEEe
Q 001877 592 PPREEVKNAM-LSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMAL-FTRV 669 (1001)
Q Consensus 592 ~~~~~~~~~I-~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~r~ 669 (1001)
.+.|++.+.| +.+++.|++++++|+-...-+..+++.+|+.... . ++ +.+++.. ....+ -..|
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~-~----~i-~t~l~~~---------~tg~~~g~~c 159 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRV-N----LI-ASQMQRR---------YGGWVLTLRC 159 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccC-c----eE-EEEEEEE---------EccEECCccC
Confidence 4589999999 5788899999999999999999999999962210 0 11 1111100 00001 1125
Q ss_pred ChhhHHHHHHHH-hccCCEEEEEeCCccCHHHHhcCCceEEecC
Q 001877 670 EPSHKRMLVEAL-QNQNEVVAMTGDGVNDAPALKKADIGIAMGS 712 (1001)
Q Consensus 670 ~p~~K~~~v~~l-~~~~~~v~~iGDg~ND~~~l~~A~vgIam~~ 712 (1001)
..+.|...++.. ........+-||+.||.|||+.|+.+++++.
T Consensus 160 ~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 160 LGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred CChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 678898887754 4334455678999999999999999999963
No 96
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.43 E-value=0.0006 Score=70.18 Aligned_cols=106 Identities=15% Similarity=0.105 Sum_probs=73.7
Q ss_pred CCcHHHHHHHH-HHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeC
Q 001877 592 PPREEVKNAML-SCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (1001)
Q Consensus 592 ~~~~~~~~~I~-~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 670 (1001)
.+.|++.+.|+ .++++|++++++|+-....+..+|+..|+.... . ++ +.+++.-.. .. ..-..|.
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-~----~i-~t~le~~~g---g~-----~~g~~c~ 159 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-N----LI-ASQIERGNG---GW-----VLPLRCL 159 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-c----EE-EEEeEEeCC---ce-----EcCccCC
Confidence 46899999996 788899999999999999999999996653311 0 11 111110000 00 0111366
Q ss_pred hhhHHHHHHHH-hccCCEEEEEeCCccCHHHHhcCCceEEec
Q 001877 671 PSHKRMLVEAL-QNQNEVVAMTGDGVNDAPALKKADIGIAMG 711 (1001)
Q Consensus 671 p~~K~~~v~~l-~~~~~~v~~iGDg~ND~~~l~~A~vgIam~ 711 (1001)
.++|...++.. ........+-||+.||.|||+.||.+++++
T Consensus 160 g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 160 GHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred ChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 78898877754 333345567899999999999999999995
No 97
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=97.35 E-value=0.001 Score=70.83 Aligned_cols=119 Identities=16% Similarity=0.171 Sum_probs=82.7
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeCh
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (1001)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+..... .++.+++...- +-.|
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd----~iv~~~~~~~~----------------KP~p 167 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQ----AVIIGSECEHA----------------KPHP 167 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCc----EEEecCcCCCC----------------CCCh
Confidence 467899999999999999999999999999999999999875431 12222211110 1223
Q ss_pred hhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEE-ecCc-c-H-HHHhhcCeeecCCCc
Q 001877 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA-MGSG-T-A-VAKSASDMVLADDNF 730 (1001)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa-m~~~-~-~-~~~~~ad~v~~~~~~ 730 (1001)
+--..+.+.+.-..+.+++|||+.+|+.+-++|++-.. +..+ . + .....+|+++.+...
T Consensus 168 ~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e 230 (248)
T PLN02770 168 DPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYED 230 (248)
T ss_pred HHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchh
Confidence 33345555555556789999999999999999998743 3221 1 2 223468888876554
No 98
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.32 E-value=0.001 Score=82.10 Aligned_cols=152 Identities=19% Similarity=0.297 Sum_probs=93.3
Q ss_pred CCCcEEEEEecc--cCCCcHHHHHHHHHHHh-CCcEEEEEcCCCHHHHHHHHHHhCCCCccccccccccc--chhhc---
Q 001877 578 EKDLTFIGLVGM--LDPPREEVKNAMLSCMT-AGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT--ASEFE--- 649 (1001)
Q Consensus 578 e~~l~~lG~i~~--~d~~~~~~~~~I~~l~~-~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~--~~~~~--- 649 (1001)
.-|.|++....- ...+.+++.++|++|.+ .|+.|+++|||+...........++. ....+|..+. +....
T Consensus 498 D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~--liaenG~~i~~~~~~w~~~~ 575 (726)
T PRK14501 498 DYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIH--LVAEHGAWSRAPGGEWQLLE 575 (726)
T ss_pred ecCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeE--EEEeCCEEEeCCCCceEECC
Confidence 456666653211 12477999999999999 69999999999999998877655531 1111111100 00000
Q ss_pred --------------------------------------cCCh-------HHHHHhh----c--cceEE-----EEeCh--
Q 001877 650 --------------------------------------ELPA-------MQQTVAL----Q--HMALF-----TRVEP-- 671 (1001)
Q Consensus 650 --------------------------------------~~~~-------~~~~~~~----~--~~~v~-----~r~~p-- 671 (1001)
.... .++...+ . ...+. ..+.|
T Consensus 576 ~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~ 655 (726)
T PRK14501 576 PVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAG 655 (726)
T ss_pred CcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECC
Confidence 0000 0001000 0 01111 12233
Q ss_pred hhHHHHHHHHhcc--CCEEEEEeCCccCHHHHhcC---CceEEecCccHHHHhhcCeeecCCCchHHHHHH
Q 001877 672 SHKRMLVEALQNQ--NEVVAMTGDGVNDAPALKKA---DIGIAMGSGTAVAKSASDMVLADDNFATIVAAV 737 (1001)
Q Consensus 672 ~~K~~~v~~l~~~--~~~v~~iGDg~ND~~~l~~A---~vgIam~~~~~~~~~~ad~v~~~~~~~~i~~~i 737 (1001)
.+|...++.+.+. ...++++||+.||.+||+.+ +.+|+||++ +.+|++.+.+. ..+...+
T Consensus 656 vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~s~A~~~l~~~--~eV~~~L 720 (726)
T PRK14501 656 VNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----ESRARYRLPSQ--REVRELL 720 (726)
T ss_pred CCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----CCcceEeCCCH--HHHHHHH
Confidence 4799999888764 35899999999999999986 688999875 46788988764 4466555
No 99
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.28 E-value=0.0013 Score=70.68 Aligned_cols=121 Identities=13% Similarity=0.148 Sum_probs=80.6
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeCh
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (1001)
++.|++.+.++.|+++|+++.++|+.+...+..+.+.+|+...... +++++... ..|
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~----vi~~~~~~-------------------~k~ 198 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSV----VQAGTPIL-------------------SKR 198 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEE----EEecCCCC-------------------CCH
Confidence 5679999999999999999999999999999999999998654211 11111000 012
Q ss_pred hhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEE-e--cCccH--HHHhhcCeeecCCCchHHHHHH
Q 001877 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA-M--GSGTA--VAKSASDMVLADDNFATIVAAV 737 (1001)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa-m--~~~~~--~~~~~ad~v~~~~~~~~i~~~i 737 (1001)
+--..+++.+.-..+.+++|||+.+|+.+-+.|++-.. + |.... .....+|+++.+ +..+...+
T Consensus 199 ~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~--~~eL~~~~ 267 (273)
T PRK13225 199 RALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLET--PSDLLQAV 267 (273)
T ss_pred HHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECC--HHHHHHHH
Confidence 11122223333345679999999999999999998754 2 32222 234468998754 55555543
No 100
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.28 E-value=0.0009 Score=71.34 Aligned_cols=117 Identities=15% Similarity=0.125 Sum_probs=80.0
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeCh
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (1001)
++.|++.+.++.|+++|+++.++|+.+...+..+.+.+|+..... .++++.+... ..-.|
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd----~ii~~~d~~~----------------~KP~P 168 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFS----VVLAAEDVYR----------------GKPDP 168 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCc----EEEecccCCC----------------CCCCH
Confidence 468999999999999999999999999999999999999865321 1222221110 01112
Q ss_pred hhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceE-Ee-cCccHHHHhhcCeeecCC
Q 001877 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI-AM-GSGTAVAKSASDMVLADD 728 (1001)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgI-am-~~~~~~~~~~ad~v~~~~ 728 (1001)
+-=..+++.+.-..+.+++|||+.+|+.+-+.||+.. ++ |.........+|+++.+.
T Consensus 169 e~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~~ 227 (260)
T PLN03243 169 EMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRRL 227 (260)
T ss_pred HHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCCH
Confidence 2233445555555677999999999999999999954 33 322233334578876653
No 101
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.26 E-value=0.001 Score=69.82 Aligned_cols=116 Identities=16% Similarity=0.100 Sum_probs=79.8
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeCh
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (1001)
++.|++.+.++.|++.|+++.++|+.+...+..+.+++|+.... ..++.+..... .+-.|
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f----~~i~~~~~~~~----------------~KP~p 154 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC----AVLIGGDTLAE----------------RKPHP 154 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc----cEEEecCcCCC----------------CCCCH
Confidence 57899999999999999999999999999888888889886532 11111111000 01123
Q ss_pred hhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEE-e--cC--cc-HHHHhhcCeeecC
Q 001877 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA-M--GS--GT-AVAKSASDMVLAD 727 (1001)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa-m--~~--~~-~~~~~~ad~v~~~ 727 (1001)
+--..+++.+.-..+.+++|||+.+|+.|-+.||+... + |. .. ......+|+++.+
T Consensus 155 ~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~ 216 (229)
T PRK13226 155 LPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQ 216 (229)
T ss_pred HHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCC
Confidence 33345566666567789999999999999999998843 3 21 11 2233458888854
No 102
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=97.17 E-value=0.00095 Score=69.46 Aligned_cols=89 Identities=18% Similarity=0.204 Sum_probs=62.5
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCC----CHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEE
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGD----NKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT 667 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd----~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (1001)
.+.+.+.+.++.++++|+++.++|++ ...++..+.+.+|+.... ..++.++....
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f----~~i~~~d~~~~----------------- 172 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN----PVIFAGDKPGQ----------------- 172 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhe----eEEECCCCCCC-----------------
Confidence 34555999999999999999999999 777999999999996532 11122111100
Q ss_pred EeChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCce
Q 001877 668 RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG 707 (1001)
Q Consensus 668 r~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vg 707 (1001)
-.| +|.. .+++.+ .++|+||+.||..+-+.|++-
T Consensus 173 -~Kp-~~~~---~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 173 -YQY-TKTQ---WIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred -CCC-CHHH---HHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 012 2332 344444 478999999999999999886
No 103
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.15 E-value=0.0023 Score=62.39 Aligned_cols=102 Identities=17% Similarity=0.193 Sum_probs=67.0
Q ss_pred cCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHH---HHHHHh---C--CCC-cccccccccccchhhccCChHHHHHhh
Q 001877 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAE---SICHKI---G--AFD-HLVDFVGRSYTASEFEELPAMQQTVAL 660 (1001)
Q Consensus 590 ~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~---~ia~~~---g--i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (1001)
+|.+.+++.+++++++++|++++++|||+...+. ...+++ | +.. +....++..+ ..+..
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~-----~~~~~------- 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLF-----AALHR------- 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcch-----hhhhc-------
Confidence 5788999999999999999999999999998884 556552 3 321 1111111111 00000
Q ss_pred ccceEEEEeCh-hhHHHHHHHHhc-----cCCEEEEEeCCccCHHHHhcCCce
Q 001877 661 QHMALFTRVEP-SHKRMLVEALQN-----QNEVVAMTGDGVNDAPALKKADIG 707 (1001)
Q Consensus 661 ~~~~v~~r~~p-~~K~~~v~~l~~-----~~~~v~~iGDg~ND~~~l~~A~vg 707 (1001)
.+.. ..| +.|.+.++.+.+ ....++.+||+.+|+.+.+++++.
T Consensus 93 ---e~i~-~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 93 ---EVIS-KKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred ---cccc-CCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 0111 223 347777777765 345677899999999999988774
No 104
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=97.12 E-value=0.0015 Score=67.88 Aligned_cols=88 Identities=16% Similarity=0.224 Sum_probs=63.0
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCC----HHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEE
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDN----KSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT 667 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~----~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (1001)
.+.+++++.++.+++.|+++.++|||+ ..++..+.+..|+..... ... +++
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~--f~v-----------------------il~ 168 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNM--NPV-----------------------IFA 168 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccc--eeE-----------------------EEc
Confidence 477889999999999999999999985 568888898899942110 011 222
Q ss_pred EeC--hhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceE
Q 001877 668 RVE--PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI 708 (1001)
Q Consensus 668 r~~--p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgI 708 (1001)
.-+ ..+|...+ ++.+ .++++||..+|..+-+.||+-.
T Consensus 169 gd~~~K~~K~~~l---~~~~-i~I~IGDs~~Di~aA~~AGi~~ 207 (237)
T PRK11009 169 GDKPGQYTKTQWL---KKKN-IRIFYGDSDNDITAAREAGARG 207 (237)
T ss_pred CCCCCCCCHHHHH---HhcC-CeEEEcCCHHHHHHHHHcCCcE
Confidence 111 13455443 3443 5888999999999999999863
No 105
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.06 E-value=0.0021 Score=67.17 Aligned_cols=117 Identities=26% Similarity=0.275 Sum_probs=77.5
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCC--CcccccccccccchhhccCChHHHHHhhccceEEEE
Q 001877 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAF--DHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR 668 (1001)
Q Consensus 591 d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 668 (1001)
.++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+. ... ..++...+... .+
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f----~~i~~~~~~~~----------------~K 145 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDV----DAVVCPSDVAA----------------GR 145 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccC----CEEEcCCcCCC----------------CC
Confidence 478999999999999999999999999999999999999986 322 11222211100 00
Q ss_pred eChhhHHHHHHHHhcc-CCEEEEEeCCccCHHHHhcCCceEE--ecCc--c-HH-HHhhcCeeecC
Q 001877 669 VEPSHKRMLVEALQNQ-NEVVAMTGDGVNDAPALKKADIGIA--MGSG--T-AV-AKSASDMVLAD 727 (1001)
Q Consensus 669 ~~p~~K~~~v~~l~~~-~~~v~~iGDg~ND~~~l~~A~vgIa--m~~~--~-~~-~~~~ad~v~~~ 727 (1001)
-.|+-=..+++.+.-. .+.+++|||+.+|+.+-+.||+..+ +..+ . .. ....+|+++.+
T Consensus 146 P~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~ 211 (220)
T TIGR03351 146 PAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDS 211 (220)
T ss_pred CCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecC
Confidence 1122223333444333 3689999999999999999999863 3222 1 11 23346776643
No 106
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=97.06 E-value=0.0034 Score=67.71 Aligned_cols=97 Identities=14% Similarity=0.046 Sum_probs=65.6
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeCh
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (1001)
++-|++.+.|+.|+++|+++.++||.....+..+.+..|+..... ..++..++... .+-.|
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~---d~i~~~~~~~~----------------~KP~p 161 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP---DHVVTTDDVPA----------------GRPYP 161 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc---eEEEcCCcCCC----------------CCCCh
Confidence 467899999999999999999999999999988888887754321 11111111100 00112
Q ss_pred hhHHHHHHHHhcc-CCEEEEEeCCccCHHHHhcCCce
Q 001877 672 SHKRMLVEALQNQ-NEVVAMTGDGVNDAPALKKADIG 707 (1001)
Q Consensus 672 ~~K~~~v~~l~~~-~~~v~~iGDg~ND~~~l~~A~vg 707 (1001)
+-=..+.+.+.-. .+.+++|||+.+|+.+-+.||+-
T Consensus 162 ~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~ 198 (267)
T PRK13478 162 WMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMW 198 (267)
T ss_pred HHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCE
Confidence 2223333444332 36799999999999999999984
No 107
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=97.06 E-value=0.0026 Score=67.98 Aligned_cols=98 Identities=15% Similarity=0.097 Sum_probs=68.5
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeCh
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (1001)
++.|++.+.++.|+++|+++.++||.....+..+.+++|+..... ..++.+++... .+-.|
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~---d~ii~~~~~~~----------------~KP~p 159 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP---DYNVTTDDVPA----------------GRPAP 159 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC---ceEEccccCCC----------------CCCCH
Confidence 467899999999999999999999999999999999999876421 11222221100 00122
Q ss_pred hhHHHHHHHHhcc-CCEEEEEeCCccCHHHHhcCCceE
Q 001877 672 SHKRMLVEALQNQ-NEVVAMTGDGVNDAPALKKADIGI 708 (1001)
Q Consensus 672 ~~K~~~v~~l~~~-~~~v~~iGDg~ND~~~l~~A~vgI 708 (1001)
+-=..+++.+.-. .+.+++|||+.+|+.+-+.||+..
T Consensus 160 ~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~ 197 (253)
T TIGR01422 160 WMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWT 197 (253)
T ss_pred HHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeE
Confidence 2223444444432 457999999999999999999863
No 108
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=97.01 E-value=0.0027 Score=70.42 Aligned_cols=116 Identities=16% Similarity=0.133 Sum_probs=80.1
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeCh
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (1001)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+..... .++.+++...- .-.|
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd----~Iv~sddv~~~----------------KP~P 275 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFS----VIVAAEDVYRG----------------KPDP 275 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHce----EEEecCcCCCC----------------CCCH
Confidence 467999999999999999999999999999999999999876431 12222211000 0122
Q ss_pred hhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEE-ecCccHHH-HhhcCeeecC
Q 001877 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA-MGSGTAVA-KSASDMVLAD 727 (1001)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa-m~~~~~~~-~~~ad~v~~~ 727 (1001)
+-=..+++.+.-..+.+++|||+.+|+.+-+.|++-.. +..+.+.. ...||+++.+
T Consensus 276 eifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~s 333 (381)
T PLN02575 276 EMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVRR 333 (381)
T ss_pred HHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEECC
Confidence 33344555555557789999999999999999999743 43322221 2347887755
No 109
>PRK11587 putative phosphatase; Provisional
Probab=96.96 E-value=0.0041 Score=64.79 Aligned_cols=115 Identities=16% Similarity=0.068 Sum_probs=75.4
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeCh
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (1001)
++.|++.+.++.|+++|+++.++|+.+...+....+..|+... ..+++.+.... ..-.|
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~-----~~i~~~~~~~~----------------~KP~p 141 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP-----EVFVTAERVKR----------------GKPEP 141 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc-----cEEEEHHHhcC----------------CCCCc
Confidence 4789999999999999999999999988777777777776321 11222211100 00112
Q ss_pred hhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCce-EEecCcc-HHHHhhcCeeecC
Q 001877 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG-IAMGSGT-AVAKSASDMVLAD 727 (1001)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~-~~~~~~ad~v~~~ 727 (1001)
+-=..+.+.+.-..+.+++|||+.+|+.+-+.||+. |++..+. ......+|+++.+
T Consensus 142 ~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 142 DAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHS 199 (218)
T ss_pred HHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecc
Confidence 223344444544567899999999999999999985 5564332 2223457777655
No 110
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.93 E-value=0.0029 Score=64.72 Aligned_cols=94 Identities=21% Similarity=0.119 Sum_probs=67.2
Q ss_pred cCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEe
Q 001877 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRV 669 (1001)
Q Consensus 590 ~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~ 669 (1001)
.+++.+.+.++++.|++.|+++.++||.+...+..+.+.+|+..... .++..++. ..+-
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~----~~~~~~~~-----------------~~KP 162 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFP----VQIWMEDC-----------------PPKP 162 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCC----EEEeecCC-----------------CCCc
Confidence 34566677999999999999999999999999999999999875331 11111111 0112
Q ss_pred ChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcC
Q 001877 670 EPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKA 704 (1001)
Q Consensus 670 ~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A 704 (1001)
.|+--..+++.+.-..+.+++|||+.+|+.+-+.|
T Consensus 163 ~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 163 NPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred CHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 34444555666665667899999999999887654
No 111
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=96.93 E-value=0.0024 Score=66.70 Aligned_cols=98 Identities=16% Similarity=0.180 Sum_probs=69.0
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeCh
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (1001)
++.|++.++++.|+++|++++++|+.+...+....+++|+..... .++.+++. .+..|
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~----~i~~~~~~------------------~~~KP 151 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFD----AVITSEEE------------------GVEKP 151 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhcc----EEEEeccC------------------CCCCC
Confidence 478899999999999999999999999888888899999865321 11111111 01223
Q ss_pred --hhHHHHHHHHhccCCEEEEEeCCc-cCHHHHhcCCce-EEec
Q 001877 672 --SHKRMLVEALQNQNEVVAMTGDGV-NDAPALKKADIG-IAMG 711 (1001)
Q Consensus 672 --~~K~~~v~~l~~~~~~v~~iGDg~-ND~~~l~~A~vg-Iam~ 711 (1001)
+-=..+.+.+.-..+.+++|||+. +|+.+-+.||+- |.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 152 HPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred CHHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 222334444444457899999997 999999999985 4454
No 112
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.87 E-value=0.0018 Score=61.67 Aligned_cols=106 Identities=20% Similarity=0.132 Sum_probs=74.3
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhC----CCCcccccccccccchhhccCChHHHHHhhccceEEE
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIG----AFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT 667 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~g----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (1001)
.++|+.++.++.+++.+++++++|+....-..++.+.++ +....+..+...++..- +...++.
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg-------------~h~i~~~ 139 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDG-------------QHSIKYT 139 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCC-------------ceeeecC
Confidence 478999999999999999999999999999999888876 32211110100110000 0000111
Q ss_pred EeC--hhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEEe
Q 001877 668 RVE--PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAM 710 (1001)
Q Consensus 668 r~~--p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIam 710 (1001)
.-+ -.+|...|+.+++..+.+.++|||+.|++|-+.+|+=.|-
T Consensus 140 ~ds~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 140 DDSQFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred CccccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 111 2489999999999999999999999999998888776653
No 113
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.74 E-value=0.0043 Score=63.57 Aligned_cols=96 Identities=19% Similarity=0.266 Sum_probs=68.7
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeCh
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (1001)
++.|++.++++.|+++|+++.++|+-+...+....+.+|+.... ..++..++.. ...|
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f----d~i~~s~~~~------------------~~KP 149 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF----DAVLSADAVR------------------AYKP 149 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh----heeEehhhcC------------------CCCC
Confidence 46799999999999999999999999999999999999985432 1122221111 1223
Q ss_pred h--hHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEE
Q 001877 672 S--HKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA 709 (1001)
Q Consensus 672 ~--~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa 709 (1001)
+ -=..+.+.+.-..+.+++|||+.+|+.+-+.||+-..
T Consensus 150 ~~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i 189 (198)
T TIGR01428 150 APQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTA 189 (198)
T ss_pred CHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEE
Confidence 2 1134444454456789999999999999999998643
No 114
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.72 E-value=0.0095 Score=58.64 Aligned_cols=37 Identities=16% Similarity=0.291 Sum_probs=34.2
Q ss_pred HHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCC
Q 001877 596 EVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAF 632 (1001)
Q Consensus 596 ~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 632 (1001)
.+...+.+|+++|++|+.+|.........+-+++|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4567899999999999999999999999999999987
No 115
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=96.71 E-value=0.0052 Score=67.62 Aligned_cols=109 Identities=15% Similarity=0.050 Sum_probs=76.3
Q ss_pred cccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCC-cccccccccccchhhccCChHHHHHhhccceEE
Q 001877 588 GMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFD-HLVDFVGRSYTASEFEELPAMQQTVALQHMALF 666 (1001)
Q Consensus 588 ~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 666 (1001)
...+++.+++.++++.|++.|++++++||++...+..+.+.+|+.. .... +...+... ..+... --
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~----i~~~~~~~--------~~~~~~-~~ 249 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDD----LIGRPPDM--------HFQREQ-GD 249 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhh----hhCCcchh--------hhcccC-CC
Confidence 3567899999999999999999999999999999999999999875 2111 11111000 000000 00
Q ss_pred EEeChhhHHHHHHHHhc-cCCEEEEEeCCccCHHHHhcCCceEE
Q 001877 667 TRVEPSHKRMLVEALQN-QNEVVAMTGDGVNDAPALKKADIGIA 709 (1001)
Q Consensus 667 ~r~~p~~K~~~v~~l~~-~~~~v~~iGDg~ND~~~l~~A~vgIa 709 (1001)
-+-.|+-+...++.+.. ..+.++||||..+|+.+-+.|++...
T Consensus 250 ~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i 293 (300)
T PHA02530 250 KRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECW 293 (300)
T ss_pred CCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEE
Confidence 12345667777766544 34789999999999999999999843
No 116
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.67 E-value=0.0065 Score=59.81 Aligned_cols=143 Identities=16% Similarity=0.197 Sum_probs=88.0
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhcc---------
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQH--------- 662 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 662 (1001)
++-|++.++++.|++.= ..+++|-.-.+-+.++|.-+|+..........-++... .++++..+.+..
T Consensus 83 ~lvPgA~etm~~l~~~~-tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~---~PeeeR~E~L~~~~~~~~~~g 158 (315)
T COG4030 83 KLVPGAEETMATLQERW-TPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIA---VPEEEREELLSIIDVIASLSG 158 (315)
T ss_pred ccCCChHHHHHHHhccC-CceEEeccHHHHHHHHHHhcCCCccccccccccCcccc---CChHHHHHHHHhcCccccccH
Confidence 46789999999998864 44455555667788899999986533221111111000 011111111110
Q ss_pred -------ceEEEEeChhh---------------HHHHHHHHhcc---CCEEEEEeCCccCHHHHhcCC-ce-EEec-Ccc
Q 001877 663 -------MALFTRVEPSH---------------KRMLVEALQNQ---NEVVAMTGDGVNDAPALKKAD-IG-IAMG-SGT 714 (1001)
Q Consensus 663 -------~~v~~r~~p~~---------------K~~~v~~l~~~---~~~v~~iGDg~ND~~~l~~A~-vg-Iam~-~~~ 714 (1001)
-.+|.|..|.. |+++++.+.+. ....+++||+..|+.||+.+. -| +|+. ||.
T Consensus 159 eelfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGN 238 (315)
T COG4030 159 EELFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGN 238 (315)
T ss_pred HHHHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCC
Confidence 01455655544 45555544332 345688999999999998874 33 6666 888
Q ss_pred HHHHhhcCeeecCCCchHHHHHHH
Q 001877 715 AVAKSASDMVLADDNFATIVAAVA 738 (1001)
Q Consensus 715 ~~~~~~ad~v~~~~~~~~i~~~i~ 738 (1001)
+-+...||+.+.+.+.......|+
T Consensus 239 eYal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 239 EYALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred cccccccceEEeccchhhhhHHHH
Confidence 889999999998888777766663
No 117
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=96.66 E-value=0.0076 Score=65.45 Aligned_cols=120 Identities=19% Similarity=0.230 Sum_probs=75.6
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeCh
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (1001)
++.|++.+.++.|++.|+++.++|+.+......+-+..+....... . .++.+++... .+-.|
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~-~-~~v~~~~~~~----------------~KP~p 205 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQG-L-DVFAGDDVPK----------------KKPDP 205 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCc-e-EEEeccccCC----------------CCCCH
Confidence 5789999999999999999999999998888877766532211100 0 0111111000 01112
Q ss_pred hhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEEe-cCc--cHHHHhhcCeeecCCC
Q 001877 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAM-GSG--TAVAKSASDMVLADDN 729 (1001)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIam-~~~--~~~~~~~ad~v~~~~~ 729 (1001)
+-=..+++.+.-..+.+++|||+.+|+.+-+.||+.+.. ..+ .......+|+++.+-.
T Consensus 206 ~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~~~ 266 (286)
T PLN02779 206 DIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCLG 266 (286)
T ss_pred HHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECChh
Confidence 233445555555567899999999999999999988553 222 2222245788876543
No 118
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=96.62 E-value=0.0049 Score=64.40 Aligned_cols=99 Identities=15% Similarity=0.085 Sum_probs=68.5
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeCh
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (1001)
++.|++.+.++.|+++|+++.++|+.+...+....+..|+..... .++.+.+. .+..|
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd----~iv~s~~~------------------~~~KP 150 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLD----LLLSTHTF------------------GYPKE 150 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCC----EEEEeeeC------------------CCCCC
Confidence 578899999999999999999999999888888888888754321 11111111 01122
Q ss_pred --hhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCce--EEecC
Q 001877 672 --SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG--IAMGS 712 (1001)
Q Consensus 672 --~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vg--Iam~~ 712 (1001)
+-=..+.+.+.-..+.+++|||+.+|+.+-+.||+. +++.+
T Consensus 151 ~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 151 DQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred CHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeC
Confidence 212233344444456799999999999999999996 34543
No 119
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.59 E-value=0.0075 Score=57.14 Aligned_cols=93 Identities=18% Similarity=0.229 Sum_probs=65.6
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCC--------HHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccc
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDN--------KSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHM 663 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~--------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (1001)
++.+++.++++.|+++|++++++|+.. ...+..+.+.+|+..... ...+.
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----~~~~~----------------- 82 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVL-----YACPH----------------- 82 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEE-----EECCC-----------------
Confidence 578999999999999999999999998 778888889988853210 01100
Q ss_pred eEEEEeChhhHHHHHHHHh-ccCCEEEEEeC-CccCHHHHhcCCceE
Q 001877 664 ALFTRVEPSHKRMLVEALQ-NQNEVVAMTGD-GVNDAPALKKADIGI 708 (1001)
Q Consensus 664 ~v~~r~~p~~K~~~v~~l~-~~~~~v~~iGD-g~ND~~~l~~A~vgI 708 (1001)
..+-.|+-=..+++.++ -..+.++|||| ..+|+.+-+.|++--
T Consensus 83 --~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~ 127 (132)
T TIGR01662 83 --CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAF 127 (132)
T ss_pred --CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeE
Confidence 00011222234455552 45578999999 699999999998753
No 120
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=96.52 E-value=0.01 Score=58.60 Aligned_cols=112 Identities=10% Similarity=0.011 Sum_probs=72.4
Q ss_pred EEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCC-CHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhh
Q 001877 582 TFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGD-NKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVAL 660 (1001)
Q Consensus 582 ~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd-~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (1001)
......+-+-++.|++.+.++.|+++|+++.++|+. ....+..+.+.+|+...... .. ....
T Consensus 35 ~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~-----~~-----------~~~~- 97 (174)
T TIGR01685 35 IIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKT-----VP-----------MHSL- 97 (174)
T ss_pred eEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCc-----cc-----------HHHh-
Confidence 344444555578899999999999999999999987 88899999999998521100 00 0000
Q ss_pred ccceEEEEeChhhH--HHHHHHHhc------cCCEEEEEeCCccCHHHHhcCCceEEe
Q 001877 661 QHMALFTRVEPSHK--RMLVEALQN------QNEVVAMTGDGVNDAPALKKADIGIAM 710 (1001)
Q Consensus 661 ~~~~v~~r~~p~~K--~~~v~~l~~------~~~~v~~iGDg~ND~~~l~~A~vgIam 710 (1001)
-+..+.++-.+..| ..+.+.+.+ ..+.+++|||+..|+.+-++|++-+..
T Consensus 98 Fd~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 98 FDDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred ceeeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 00111111111112 233444432 246899999999999999999997654
No 121
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.38 E-value=0.016 Score=67.76 Aligned_cols=121 Identities=11% Similarity=0.149 Sum_probs=80.4
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeCh
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (1001)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...... ++++++... .-.|
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~----i~~~d~v~~-----------------~~kP 388 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTE----TFSIEQINS-----------------LNKS 388 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcce----eEecCCCCC-----------------CCCc
Confidence 5789999999999999999999999999999999999998654311 222221100 0123
Q ss_pred hhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCce-EEec--CccHHHHhhcCeeecCCCchHHHHHH
Q 001877 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG-IAMG--SGTAVAKSASDMVLADDNFATIVAAV 737 (1001)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vg-Iam~--~~~~~~~~~ad~v~~~~~~~~i~~~i 737 (1001)
+--...++.+ ..+.+++|||+.+|+.+-+.|++. |++. ...+.....+|+++.+ +..+...+
T Consensus 389 ~~~~~al~~l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~--l~el~~~l 453 (459)
T PRK06698 389 DLVKSILNKY--DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDD--LLELKGIL 453 (459)
T ss_pred HHHHHHHHhc--CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCC--HHHHHHHH
Confidence 2222222222 246799999999999999999985 4443 2222223457888754 45555544
No 122
>PLN02940 riboflavin kinase
Probab=96.35 E-value=0.011 Score=67.06 Aligned_cols=116 Identities=13% Similarity=0.102 Sum_probs=74.6
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHH-HhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeC
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICH-KIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 670 (1001)
++.|++.+.++.|++.|+++.++|+.....+....+ ..|+.... ..++.+++... ..-.
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F----d~ii~~d~v~~----------------~KP~ 152 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF----SVIVGGDEVEK----------------GKPS 152 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC----CEEEehhhcCC----------------CCCC
Confidence 467999999999999999999999999888877665 57775432 11222221100 0111
Q ss_pred hhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEE-ecCc--cHHHHhhcCeeecC
Q 001877 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA-MGSG--TAVAKSASDMVLAD 727 (1001)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa-m~~~--~~~~~~~ad~v~~~ 727 (1001)
|+-=..+++.+.-..+.+++|||+.+|+.+-+.||+... +..+ .......+|+++.+
T Consensus 153 p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~s 212 (382)
T PLN02940 153 PDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINS 212 (382)
T ss_pred HHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCC
Confidence 222334445554456789999999999999999998843 4322 22223345665543
No 123
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=96.35 E-value=0.0055 Score=61.05 Aligned_cols=98 Identities=20% Similarity=0.314 Sum_probs=70.4
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeC
Q 001877 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (1001)
Q Consensus 591 d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 670 (1001)
.++.|++.+.++.|+++|++++++|+.+........+++|+.... ..++...+.... .-.
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f----~~i~~~~~~~~~----------------Kp~ 135 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYF----DEIISSDDVGSR----------------KPD 135 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGC----SEEEEGGGSSSS----------------TTS
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCccccccccccccccccc----ccccccchhhhh----------------hhH
Confidence 457899999999999999999999999999999999999987322 112222111110 011
Q ss_pred hhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceE
Q 001877 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI 708 (1001)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgI 708 (1001)
|+-=..+++.+.-..+.+++|||+..|+.+-+.||+.-
T Consensus 136 ~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 136 PDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp HHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeE
Confidence 22234455555555678999999999999999998753
No 124
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=96.35 E-value=0.006 Score=61.64 Aligned_cols=95 Identities=16% Similarity=0.162 Sum_probs=62.2
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeCh
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (1001)
++.|++.++|+.|+++|+++.++|+... +....+.+|+..... .++.+.+... .+-.|
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~----~~~~~~~~~~----------------~kp~p 144 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFD----AIVDPAEIKK----------------GKPDP 144 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCc----EEEehhhcCC----------------CCCCh
Confidence 5789999999999999999999998643 456778888764321 1121111100 01112
Q ss_pred hhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceE
Q 001877 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI 708 (1001)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgI 708 (1001)
+-=..+.+.+.-..+.+++|||+.+|+.+-+.||+-.
T Consensus 145 ~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~ 181 (185)
T TIGR01990 145 EIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFA 181 (185)
T ss_pred HHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEE
Confidence 2223334444334567999999999999999999863
No 125
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=96.24 E-value=0.0092 Score=60.29 Aligned_cols=94 Identities=18% Similarity=0.142 Sum_probs=63.5
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeC
Q 001877 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (1001)
Q Consensus 591 d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 670 (1001)
-++.|++.+.++.|+++|+++.++|+. ..+..+.+.+|+...... ++...... +..
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~----v~~~~~~~------------------~~k 142 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDA----IVDADEVK------------------EGK 142 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCE----eeehhhCC------------------CCC
Confidence 368899999999999999999999998 567778888888643211 11111100 112
Q ss_pred hhh--HHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceE
Q 001877 671 PSH--KRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI 708 (1001)
Q Consensus 671 p~~--K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgI 708 (1001)
|.. =..+.+.+.-..+.+++|||+.+|+.+-+.||+..
T Consensus 143 p~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 143 PHPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFA 182 (185)
T ss_pred CChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeE
Confidence 221 12233333333567899999999999999998853
No 126
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=96.24 E-value=0.0055 Score=63.34 Aligned_cols=105 Identities=25% Similarity=0.347 Sum_probs=68.1
Q ss_pred CCcHHHHHHHHHH--HhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccch-hhccCChHHHHHhhccceEEEE
Q 001877 592 PPREEVKNAMLSC--MTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTAS-EFEELPAMQQTVALQHMALFTR 668 (1001)
Q Consensus 592 ~~~~~~~~~I~~l--~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~r 668 (1001)
|+.|+.++.++.+ ++.|+.++++|--+......+-+.-|+...... +++.. .++. .. .+.....+..-+.+
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~----I~TNpa~~~~-~G-~l~v~pyh~h~C~~ 144 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSE----IFTNPACFDA-DG-RLRVRPYHSHGCSL 144 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccce----EEeCCceecC-Cc-eEEEeCccCCCCCc
Confidence 5778999999999 568999999999999999999999998754311 12111 0100 00 00000000011334
Q ss_pred eChh-hHHHHHHHHhcc----C---CEEEEEeCCccC-HHHHh
Q 001877 669 VEPS-HKRMLVEALQNQ----N---EVVAMTGDGVND-APALK 702 (1001)
Q Consensus 669 ~~p~-~K~~~v~~l~~~----~---~~v~~iGDg~ND-~~~l~ 702 (1001)
+.|. =|..+++.+++. | +.|.+||||.|| ||+++
T Consensus 145 C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~ 187 (234)
T PF06888_consen 145 CPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALR 187 (234)
T ss_pred CCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccc
Confidence 4443 588988887654 4 689999999999 56654
No 127
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=96.17 E-value=0.014 Score=58.67 Aligned_cols=95 Identities=14% Similarity=0.167 Sum_probs=64.0
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeCh
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (1001)
++.|++.+.++.|+++|++++++|+..... ..+..++|+..... .++.+.+.. ...-.|
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~----~i~~~~~~~----------------~~KP~~ 143 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFD----VVIFSGDVG----------------RGKPDP 143 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCC----EEEEcCCCC----------------CCCCCH
Confidence 578999999999999999999999998887 66666688754321 111111100 000112
Q ss_pred hhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCce
Q 001877 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG 707 (1001)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vg 707 (1001)
+--..+.+.+.-..+.++++||...|+.+-+.||+-
T Consensus 144 ~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 144 DIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 222344444544567899999999999999999874
No 128
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=96.14 E-value=0.033 Score=56.00 Aligned_cols=98 Identities=20% Similarity=0.180 Sum_probs=58.9
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCH---------------HHHHHHHHHhCCCCcccccccccccchhh-ccCChHH
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNK---------------STAESICHKIGAFDHLVDFVGRSYTASEF-EELPAMQ 655 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~-~~~~~~~ 655 (1001)
.+.|++.++++.|+++|+++.++|+.+. .....+.++.|+... ........- +..
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~-----~i~~~~~~~~~~~---- 99 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD-----GIYYCPHHPEDGC---- 99 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc-----eEEECCCCCCCCC----
Confidence 3679999999999999999999998763 112223344554210 000000000 000
Q ss_pred HHHhhccceEEEEeChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCce
Q 001877 656 QTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG 707 (1001)
Q Consensus 656 ~~~~~~~~~v~~r~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vg 707 (1001)
-..+-.|+--..+++.+.-..+.++||||+.+|+.+-+.||+.
T Consensus 100 ---------~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~ 142 (181)
T PRK08942 100 ---------DCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVT 142 (181)
T ss_pred ---------cCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCe
Confidence 0001123333445555555567899999999999999999985
No 129
>PLN02423 phosphomannomutase
Probab=96.08 E-value=0.046 Score=57.87 Aligned_cols=40 Identities=25% Similarity=0.343 Sum_probs=34.6
Q ss_pred hhHHHHHHHHhccCCEEEEEeC----CccCHHHHhc-CCceEEecC
Q 001877 672 SHKRMLVEALQNQNEVVAMTGD----GVNDAPALKK-ADIGIAMGS 712 (1001)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~iGD----g~ND~~~l~~-A~vgIam~~ 712 (1001)
.+|+..++.|+ ..+.|+++|| |.||.+||+. -=.|+++.+
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~ 232 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTS 232 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCC
Confidence 37999999999 7788999999 8999999997 667888854
No 130
>PLN02580 trehalose-phosphatase
Probab=96.05 E-value=0.036 Score=61.55 Aligned_cols=62 Identities=23% Similarity=0.215 Sum_probs=45.1
Q ss_pred hhHHHHHHHHhcc-C-----C-EEEEEeCCccCHHHHhc-----CCceEEecCccHHHHhhcCeeecCCCchHHHHHH
Q 001877 672 SHKRMLVEALQNQ-N-----E-VVAMTGDGVNDAPALKK-----ADIGIAMGSGTAVAKSASDMVLADDNFATIVAAV 737 (1001)
Q Consensus 672 ~~K~~~v~~l~~~-~-----~-~v~~iGDg~ND~~~l~~-----A~vgIam~~~~~~~~~~ad~v~~~~~~~~i~~~i 737 (1001)
.+|...++.+.+. + . .++++||+.||..||+. +++||+||++.... .|++-+.+ ...+...+
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~t--~A~y~L~d--p~eV~~~L 373 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKES--NAFYSLRD--PSEVMEFL 373 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCCc--cceEEcCC--HHHHHHHH
Confidence 3899998887654 2 1 24899999999999996 69999999765433 57787754 44555554
No 131
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=96.03 E-value=0.016 Score=60.69 Aligned_cols=93 Identities=18% Similarity=0.192 Sum_probs=66.2
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeCh
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (1001)
++.|++.+.++.|++. ++++++|+-....+..+.+++|+..... .++...+.. ...|
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd----~i~~~~~~~------------------~~KP 153 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFD----DIFVSEDAG------------------IQKP 153 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcC----EEEEcCccC------------------CCCC
Confidence 5689999999999999 9999999999999999999999865321 111111110 0123
Q ss_pred h--hHHHHHHHH-hccCCEEEEEeCCc-cCHHHHhcCCce
Q 001877 672 S--HKRMLVEAL-QNQNEVVAMTGDGV-NDAPALKKADIG 707 (1001)
Q Consensus 672 ~--~K~~~v~~l-~~~~~~v~~iGDg~-ND~~~l~~A~vg 707 (1001)
+ -=..+++.+ .-..+.+++|||+. +|+.+-+.+|+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~ 193 (224)
T TIGR02254 154 DKEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLD 193 (224)
T ss_pred CHHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCc
Confidence 2 223444444 33456799999998 899999999974
No 132
>PRK06769 hypothetical protein; Validated
Probab=95.97 E-value=0.013 Score=58.29 Aligned_cols=113 Identities=14% Similarity=0.006 Sum_probs=68.4
Q ss_pred CCCcEEEEEecccC----CCcHHHHHHHHHHHhCCcEEEEEcCCCHH--------HHHHHHHHhCCCCcccccccccccc
Q 001877 578 EKDLTFIGLVGMLD----PPREEVKNAMLSCMTAGIRVIVVTGDNKS--------TAESICHKIGAFDHLVDFVGRSYTA 645 (1001)
Q Consensus 578 e~~l~~lG~i~~~d----~~~~~~~~~I~~l~~~gi~v~~~TGd~~~--------~a~~ia~~~gi~~~~~~~~~~~~~~ 645 (1001)
..|.++.|-..+.+ ++.|++.++++.|++.|+++.++|+.+.. ......+..|+...... ....+
T Consensus 10 d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~---~~~~~ 86 (173)
T PRK06769 10 DRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLC---PHKHG 86 (173)
T ss_pred eCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEEC---cCCCC
Confidence 45566655544333 36899999999999999999999987642 23333445565432100 00000
Q ss_pred hhhccCChHHHHHhhccceEEEEeChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEE
Q 001877 646 SEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA 709 (1001)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa 709 (1001)
++.. ..+-.|+-=..+++.+....+.+++|||+.+|+.+-+.|++-..
T Consensus 87 ~~~~----------------~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 87 DGCE----------------CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred CCCC----------------CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 0000 00112233344555555455789999999999999999998754
No 133
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=95.91 E-value=0.018 Score=57.19 Aligned_cols=86 Identities=16% Similarity=0.196 Sum_probs=62.7
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCC-HHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeC
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDN-KSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~-~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 670 (1001)
.+.+++.++++.|++.|++++++|+.+ ...+..+.+.+|+.... ....
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~-------------------------------~~~K 91 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLP-------------------------------HAVK 91 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEc-------------------------------CCCC
Confidence 578999999999999999999999988 67777788888764210 0012
Q ss_pred h--hhHHHHHHHHhccCCEEEEEeCCc-cCHHHHhcCCceE
Q 001877 671 P--SHKRMLVEALQNQNEVVAMTGDGV-NDAPALKKADIGI 708 (1001)
Q Consensus 671 p--~~K~~~v~~l~~~~~~v~~iGDg~-ND~~~l~~A~vgI 708 (1001)
| +-=..+.+.+.-..+.++||||.. .|+.+-+.|++-.
T Consensus 92 P~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~ 132 (170)
T TIGR01668 92 PPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYT 132 (170)
T ss_pred CChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeE
Confidence 2 222233333433456799999998 7999999999863
No 134
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=95.84 E-value=0.032 Score=55.84 Aligned_cols=122 Identities=16% Similarity=0.113 Sum_probs=65.1
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEcCCCHH---------------HHHHHHHHhCCCCcccccccccccchhhccCChHHHH
Q 001877 593 PREEVKNAMLSCMTAGIRVIVVTGDNKS---------------TAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQT 657 (1001)
Q Consensus 593 ~~~~~~~~I~~l~~~gi~v~~~TGd~~~---------------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (1001)
+.|++.++|+.|+++|+++.++|.-+.. ....+..+.|+.-...........+ .....+
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~--~~~~~~---- 100 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYYCPHHPEG--VEEFRQ---- 100 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEECCCCCcc--cccccC----
Confidence 5789999999999999999999987641 1122333334331100000000000 000000
Q ss_pred HhhccceEEEEeCh--hhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceE--EecCcc---HHHHhhcCeeecC
Q 001877 658 VALQHMALFTRVEP--SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI--AMGSGT---AVAKSASDMVLAD 727 (1001)
Q Consensus 658 ~~~~~~~v~~r~~p--~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgI--am~~~~---~~~~~~ad~v~~~ 727 (1001)
-.....| +-=..+.+.+.-..+.++||||..+|+.+-+.|++.. .+..+. ......||+++.+
T Consensus 101 -------~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~ 170 (176)
T TIGR00213 101 -------VCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNS 170 (176)
T ss_pred -------CCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEecc
Confidence 0001122 2223333444434578899999999999999999964 433222 1122347888754
No 135
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=95.79 E-value=0.036 Score=58.67 Aligned_cols=86 Identities=15% Similarity=0.203 Sum_probs=60.7
Q ss_pred cCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHH---HHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEE
Q 001877 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKST---AESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALF 666 (1001)
Q Consensus 590 ~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 666 (1001)
..++-|++.+.++.+++.|+++.++|+++... +....++.|+.....+ .++
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d--------------------------~ll 169 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEE--------------------------HLL 169 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcc--------------------------eEE
Confidence 34578999999999999999999999998443 4456677888642211 133
Q ss_pred EEeChhhHHHHHHHHhccCCEEEEEeCCccCHHHH
Q 001877 667 TRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPAL 701 (1001)
Q Consensus 667 ~r~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l 701 (1001)
.|-....|....+.+.+.-.+++++||..+|....
T Consensus 170 lr~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 170 LKKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDF 204 (266)
T ss_pred eCCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhh
Confidence 33333346666666655556799999999998653
No 136
>PRK09449 dUMP phosphatase; Provisional
Probab=95.78 E-value=0.029 Score=58.65 Aligned_cols=121 Identities=13% Similarity=0.136 Sum_probs=74.8
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeCh
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (1001)
++.|++.++++.|+ +|+++.++|+.....+....+++|+..... .++...+.. ...|
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd----~v~~~~~~~------------------~~KP 151 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFD----LLVISEQVG------------------VAKP 151 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcC----EEEEECccC------------------CCCC
Confidence 46799999999999 689999999999988888888888864321 111111110 0122
Q ss_pred h--hHHHHHHHHhcc-CCEEEEEeCCc-cCHHHHhcCCce-EEec-CccH-HHHhhcCeeecCCCchHHHHHH
Q 001877 672 S--HKRMLVEALQNQ-NEVVAMTGDGV-NDAPALKKADIG-IAMG-SGTA-VAKSASDMVLADDNFATIVAAV 737 (1001)
Q Consensus 672 ~--~K~~~v~~l~~~-~~~v~~iGDg~-ND~~~l~~A~vg-Iam~-~~~~-~~~~~ad~v~~~~~~~~i~~~i 737 (1001)
+ -=..+++.+.-. .+.+++|||+. +|+.+-+.||+- |.+. .+.. .....+|+++.+ +..+...+
T Consensus 152 ~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~--~~el~~~l 222 (224)
T PRK09449 152 DVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSS--LSELEQLL 222 (224)
T ss_pred CHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECC--HHHHHHHH
Confidence 2 123334444322 35799999998 799999999986 3443 1211 111246777643 44554443
No 137
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=95.62 E-value=0.058 Score=55.45 Aligned_cols=87 Identities=14% Similarity=0.079 Sum_probs=56.9
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHH---HHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEE
Q 001877 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKST---AESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT 667 (1001)
Q Consensus 591 d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (1001)
-+.-|++.+.++.+++.|++|+++|||+... +..-.++.|+.... .+.+.+..-.
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~----~LiLR~~~d~------------------ 176 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWK----HLILRGLEDS------------------ 176 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcC----eeeecCCCCC------------------
Confidence 4788999999999999999999999999766 44445567766421 1111110000
Q ss_pred EeC-hhhHHHHHHHHhccCC-EEEEEeCCccCHH
Q 001877 668 RVE-PSHKRMLVEALQNQNE-VVAMTGDGVNDAP 699 (1001)
Q Consensus 668 r~~-p~~K~~~v~~l~~~~~-~v~~iGDg~ND~~ 699 (1001)
+.+ -.-|.+.-+.+.+.|. +++.+||..+|..
T Consensus 177 ~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 177 NKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred CchHhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 000 1126666666666665 6678999999973
No 138
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=95.62 E-value=0.026 Score=58.00 Aligned_cols=93 Identities=14% Similarity=0.116 Sum_probs=61.3
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeCh
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (1001)
++-|++.++++.|+++|+++.++|+-... +....+.+|+..... .++...+.. ...|
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd----~i~~s~~~~------------------~~KP 161 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFD----FVVTSYEVG------------------AEKP 161 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcc----eEEeecccC------------------CCCC
Confidence 57789999999999999999999987654 467777888754321 111111100 0122
Q ss_pred h--hHHHHHHHHhccCCEEEEEeCCc-cCHHHHhcCCce
Q 001877 672 S--HKRMLVEALQNQNEVVAMTGDGV-NDAPALKKADIG 707 (1001)
Q Consensus 672 ~--~K~~~v~~l~~~~~~v~~iGDg~-ND~~~l~~A~vg 707 (1001)
+ -=..+++.+.-..+.+++|||+. +|+.+-+.||+-
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 162 DPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred CHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 1 12333344444457899999997 899999998864
No 139
>PLN02811 hydrolase
Probab=95.57 E-value=0.043 Score=57.17 Aligned_cols=98 Identities=14% Similarity=0.142 Sum_probs=60.6
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHH-HHHHhCCCCcccccccccccch--hhccCChHHHHHhhccceEEEE
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAES-ICHKIGAFDHLVDFVGRSYTAS--EFEELPAMQQTVALQHMALFTR 668 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~-ia~~~gi~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~r 668 (1001)
++.|++.+.|+.|+++|+++.++||-....... ..+..|+.... ..++.++ +... ..
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f----~~i~~~~~~~~~~----------------~K 137 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLM----HHVVTGDDPEVKQ----------------GK 137 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhC----CEEEECChhhccC----------------CC
Confidence 467999999999999999999999987654432 22222332211 1111111 1000 00
Q ss_pred eChhhHHHHHHHHh---ccCCEEEEEeCCccCHHHHhcCCceEE
Q 001877 669 VEPSHKRMLVEALQ---NQNEVVAMTGDGVNDAPALKKADIGIA 709 (1001)
Q Consensus 669 ~~p~~K~~~v~~l~---~~~~~v~~iGDg~ND~~~l~~A~vgIa 709 (1001)
-.|+-=...++.+. -..+.+++|||+..|+.+-+.||+...
T Consensus 138 P~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i 181 (220)
T PLN02811 138 PAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVV 181 (220)
T ss_pred CCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEE
Confidence 12222234445453 335789999999999999999999754
No 140
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=95.53 E-value=0.029 Score=54.71 Aligned_cols=90 Identities=18% Similarity=0.162 Sum_probs=58.2
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeChh
Q 001877 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPS 672 (1001)
Q Consensus 593 ~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 672 (1001)
..+++.+.++.|+++|+++.++|+.....+....+.. +.... ..++..+. +..+-.|+
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f----~~i~~~~~-----------------~~~Kp~~~ 122 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYF----DLILGSDE-----------------FGAKPEPE 122 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcC----cEEEecCC-----------------CCCCcCHH
Confidence 3478999999999999999999999999998888775 33221 01111110 00011122
Q ss_pred hHHHHHHHHhccCCEEEEEeCCccCHHHHhcCC
Q 001877 673 HKRMLVEALQNQNEVVAMTGDGVNDAPALKKAD 705 (1001)
Q Consensus 673 ~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~ 705 (1001)
-=..+.+.+.-.. .+++|||+.+|+.+-+.|+
T Consensus 123 ~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 123 IFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 2223333333334 7999999999999988775
No 141
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=95.50 E-value=0.03 Score=54.16 Aligned_cols=99 Identities=19% Similarity=0.172 Sum_probs=61.5
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCH---------------HHHHHHHHHhCCCCcccccccccccchhhccCChHHH
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNK---------------STAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQ 656 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (1001)
++.|++.++++.|+++|+++.++|+.+. ..+..+.+.+|+...... .......+.
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-~~~~~~~~~--------- 96 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVL-FCPHHPADN--------- 96 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEE-ECCCCCCCC---------
Confidence 4689999999999999999999998763 455667778887521000 000000000
Q ss_pred HHhhccceEEEEeChh--hHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEE
Q 001877 657 TVALQHMALFTRVEPS--HKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA 709 (1001)
Q Consensus 657 ~~~~~~~~v~~r~~p~--~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa 709 (1001)
... ..|+ -=..+++.+.-..+.+++|||...|+.+-+.|++-..
T Consensus 97 --------~~~-~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v 142 (147)
T TIGR01656 97 --------CSC-RKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAV 142 (147)
T ss_pred --------CCC-CCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEE
Confidence 000 1221 1123333333345679999999999999999988643
No 142
>PLN03017 trehalose-phosphatase
Probab=95.36 E-value=0.15 Score=56.21 Aligned_cols=48 Identities=15% Similarity=0.096 Sum_probs=40.1
Q ss_pred CCCcEEEEEecccC--CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHH
Q 001877 578 EKDLTFIGLVGMLD--PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESIC 626 (1001)
Q Consensus 578 e~~l~~lG~i~~~d--~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia 626 (1001)
.-|.+|+-++.-.| .+.+++.++|++|. .|++++++|||.......+.
T Consensus 117 D~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 117 DYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred ecCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 46778876665444 48899999999999 78999999999999998874
No 143
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=95.36 E-value=0.036 Score=54.30 Aligned_cols=95 Identities=15% Similarity=0.081 Sum_probs=61.0
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCC---------------HHHHHHHHHHhCCCCccccccccccc----chhhccCC
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDN---------------KSTAESICHKIGAFDHLVDFVGRSYT----ASEFEELP 652 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~---------------~~~a~~ia~~~gi~~~~~~~~~~~~~----~~~~~~~~ 652 (1001)
++-|++.++++.|+++|++++++|.-+ ...+..+.+++|+.-. ...++ .++.
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd-----~ii~~~~~~~~~~---- 99 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFD-----DVLICPHFPDDNC---- 99 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCcee-----EEEECCCCCCCCC----
Confidence 456899999999999999999999852 4456677788887510 01111 0000
Q ss_pred hHHHHHhhccceEEEEeChh--hHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEE
Q 001877 653 AMQQTVALQHMALFTRVEPS--HKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA 709 (1001)
Q Consensus 653 ~~~~~~~~~~~~v~~r~~p~--~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa 709 (1001)
.+ ..|. -=..+++.+.-..+.+.||||+.+|+.+-+.|++...
T Consensus 100 -------------~~-~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 100 -------------DC-RKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred -------------CC-CCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 00 1221 1122233333234679999999999999999998754
No 144
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=95.36 E-value=0.053 Score=56.04 Aligned_cols=99 Identities=12% Similarity=0.132 Sum_probs=67.0
Q ss_pred cCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhC---CCCcccccccccccchhhccCChHHHHHhhccceEE
Q 001877 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIG---AFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALF 666 (1001)
Q Consensus 590 ~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~g---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 666 (1001)
+-++.|++.+++++|+++|+++.++|..+......+.+..+ +...... .+ +..+.
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~----~f------------------d~~~g 150 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSG----YF------------------DTTVG 150 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcce----EE------------------EeCcc
Confidence 45789999999999999999999999998887777766652 2221100 00 00011
Q ss_pred EEeChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEEe
Q 001877 667 TRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAM 710 (1001)
Q Consensus 667 ~r~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIam 710 (1001)
..-.|+-=..+++.+.-..+.++++||...|+.+-++||+-...
T Consensus 151 ~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 151 LKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred cCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 11223333445555554567899999999999999999997543
No 145
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=95.35 E-value=0.014 Score=56.53 Aligned_cols=95 Identities=15% Similarity=0.050 Sum_probs=65.2
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeCh
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (1001)
+++|++.+.++.|+ .++++.++|+-+...+..+.+.+|+..... ..++..++.. +..|
T Consensus 45 ~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f---~~i~~~~d~~------------------~~KP 102 (148)
T smart00577 45 KKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFG---YRRLFRDECV------------------FVKG 102 (148)
T ss_pred EECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEe---eeEEECcccc------------------ccCC
Confidence 57999999999999 579999999999999999999998754211 1112111110 0112
Q ss_pred hhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEE
Q 001877 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA 709 (1001)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa 709 (1001)
. =...++.+....+.+++|||..+|..+-+.|++-|.
T Consensus 103 ~-~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 103 K-YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred e-EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 1 111233344456789999999999998877876665
No 146
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=95.19 E-value=0.076 Score=68.10 Aligned_cols=133 Identities=13% Similarity=0.171 Sum_probs=89.8
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeCh
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (1001)
.+.|++.+.++.|+++|+++.++|+.....+....++.|+..... ..++..++.. +..|
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~F---d~iv~~~~~~------------------~~KP 219 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMF---DAIVSADAFE------------------NLKP 219 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHC---CEEEECcccc------------------cCCC
Confidence 357899999999999999999999999999999999999852111 1122221111 1122
Q ss_pred --hhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCce-EEecC---ccHHHHhhcCeeecCCCchHHHHHHHHhHHHHH
Q 001877 672 --SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG-IAMGS---GTAVAKSASDMVLADDNFATIVAAVAEGRAIYN 745 (1001)
Q Consensus 672 --~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vg-Iam~~---~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~ 745 (1001)
+-=..+++.+.-..+.+++|||..+|+.+-+.|++- |++.. ..+.....+|+++.+.....+..++..|-..+.
T Consensus 220 ~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~~~~~~~~ 299 (1057)
T PLN02919 220 APDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILTGGSDATP 299 (1057)
T ss_pred CHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHhcCCCCCC
Confidence 222344555554567899999999999999999995 34432 223334567888887766666666655554443
No 147
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=95.04 E-value=0.061 Score=50.53 Aligned_cols=86 Identities=6% Similarity=0.047 Sum_probs=58.3
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCC-CHHHHHHHHHHhC-------CCCcccccccccccchhhccCChHHHHHhhccc
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGD-NKSTAESICHKIG-------AFDHLVDFVGRSYTASEFEELPAMQQTVALQHM 663 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd-~~~~a~~ia~~~g-------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (1001)
++.+++.+.++.|+++|+++.++|+. ....+..+.+..| +.... ..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f----~~~--------------------- 83 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYF----DPL--------------------- 83 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhh----hhh---------------------
Confidence 68999999999999999999999999 7877777777776 21110 001
Q ss_pred eEEEEeC--hhhHHHHHHHHh--ccCCEEEEEeCCccCHHHHhc
Q 001877 664 ALFTRVE--PSHKRMLVEALQ--NQNEVVAMTGDGVNDAPALKK 703 (1001)
Q Consensus 664 ~v~~r~~--p~~K~~~v~~l~--~~~~~v~~iGDg~ND~~~l~~ 703 (1001)
+..+.. |+-=..+++.+. -..+.++++||...|...++.
T Consensus 84 -~~~~~~pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 84 -TIGYWLPKSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred -hhcCCCcHHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence 111111 222233444454 445889999999999877653
No 148
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=94.89 E-value=0.1 Score=49.68 Aligned_cols=86 Identities=22% Similarity=0.316 Sum_probs=66.2
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeC
Q 001877 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (1001)
Q Consensus 591 d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 670 (1001)
.+..|++.+=+++++++|++++++|..++..+...++.+|+..- +--..
T Consensus 45 ~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~fi-------------------------------~~A~K 93 (175)
T COG2179 45 PDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPFI-------------------------------YRAKK 93 (175)
T ss_pred CCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCcee-------------------------------ecccC
Confidence 45889999999999999999999999999999999999998752 21123
Q ss_pred hhhH--HHHHHHHhccCCEEEEEeCC-ccCHHHHhcCCce
Q 001877 671 PSHK--RMLVEALQNQNEVVAMTGDG-VNDAPALKKADIG 707 (1001)
Q Consensus 671 p~~K--~~~v~~l~~~~~~v~~iGDg-~ND~~~l~~A~vg 707 (1001)
|-.+ .+.++.++-..+.|+||||. ..|+-+=..|++-
T Consensus 94 P~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~ 133 (175)
T COG2179 94 PFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMR 133 (175)
T ss_pred ccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcE
Confidence 3322 34555555567899999998 4788776666654
No 149
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=94.82 E-value=0.1 Score=64.90 Aligned_cols=51 Identities=12% Similarity=0.133 Sum_probs=39.9
Q ss_pred CCCcEEEEEecccCCCcHHHHHHHHHH-HhCCcEEEEEcCCCHHHHHHHHHH
Q 001877 578 EKDLTFIGLVGMLDPPREEVKNAMLSC-MTAGIRVIVVTGDNKSTAESICHK 628 (1001)
Q Consensus 578 e~~l~~lG~i~~~d~~~~~~~~~I~~l-~~~gi~v~~~TGd~~~~a~~ia~~ 628 (1001)
.-|.|++-.....-.+.+++.+++++| ++.|+.|+++|||...+.......
T Consensus 602 DyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 602 DYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred ecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 456666644333446778999999997 788999999999999999887754
No 150
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=94.81 E-value=0.089 Score=51.90 Aligned_cols=92 Identities=12% Similarity=0.101 Sum_probs=58.5
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEcCCCHH------------HHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhh
Q 001877 593 PREEVKNAMLSCMTAGIRVIVVTGDNKS------------TAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVAL 660 (1001)
Q Consensus 593 ~~~~~~~~I~~l~~~gi~v~~~TGd~~~------------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (1001)
+-|++.++++.|+++|+++.++|..+.. .+..+.+.+|+.... ++.+...
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~------ii~~~~~------------ 104 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPIQV------LAATHAG------------ 104 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCEEE------EEecCCC------------
Confidence 3489999999999999999999976542 456677888874311 1111000
Q ss_pred ccceEEEEeCh--hhHHHHHHHHh--ccCCEEEEEeCCc--------cCHHHHhcCCceE
Q 001877 661 QHMALFTRVEP--SHKRMLVEALQ--NQNEVVAMTGDGV--------NDAPALKKADIGI 708 (1001)
Q Consensus 661 ~~~~v~~r~~p--~~K~~~v~~l~--~~~~~v~~iGDg~--------ND~~~l~~A~vgI 708 (1001)
.+ ..| +-=..+.+.+. -..+.++||||.. +|+.+-+.||+-.
T Consensus 105 -----~~-~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 105 -----LY-RKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred -----CC-CCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 00 122 22233344443 2346799999986 6999988887754
No 151
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=94.76 E-value=0.23 Score=52.53 Aligned_cols=94 Identities=13% Similarity=0.122 Sum_probs=60.7
Q ss_pred EEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHH--HHHHHhCCCC-cccccccccccchhhccCChHHHHHhhc
Q 001877 585 GLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAE--SICHKIGAFD-HLVDFVGRSYTASEFEELPAMQQTVALQ 661 (1001)
Q Consensus 585 G~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~--~ia~~~gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (1001)
|.+.-.+.+-|++.+++++|+++|+++.++|......+. ...+++|+.. ... .+++..
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~----~Ii~s~--------------- 77 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPE----MIISSG--------------- 77 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccc----eEEccH---------------
Confidence 444556778999999999999999999999996655444 5668888864 211 111111
Q ss_pred cceEEEEeChhhHHHHHHHHhc---cCCEEEEEeCCccCHHHHhcCCc
Q 001877 662 HMALFTRVEPSHKRMLVEALQN---QNEVVAMTGDGVNDAPALKKADI 706 (1001)
Q Consensus 662 ~~~v~~r~~p~~K~~~v~~l~~---~~~~v~~iGDg~ND~~~l~~A~v 706 (1001)
......+.+.+++ .+..+.++||+..|...+..++.
T Consensus 78 ---------~~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 78 ---------EIAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred ---------HHHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence 0011122222222 35679999999999988865543
No 152
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=94.76 E-value=0.074 Score=58.88 Aligned_cols=90 Identities=9% Similarity=0.121 Sum_probs=67.8
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHH----hCCCCcccccccccccchhhccCChHHHHHhhccceEEE
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHK----IGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT 667 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~----~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (1001)
++.+++.++|+.|+++|+++.++|..+...+..+.++ +|+..... ..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~-----------------------------~~ 81 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFD-----------------------------AR 81 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHee-----------------------------EE
Confidence 4579999999999999999999999999999999988 77654221 11
Q ss_pred EeChhhHHHHHHH----HhccCCEEEEEeCCccCHHHHhcCCceEEe
Q 001877 668 RVEPSHKRMLVEA----LQNQNEVVAMTGDGVNDAPALKKADIGIAM 710 (1001)
Q Consensus 668 r~~p~~K~~~v~~----l~~~~~~v~~iGDg~ND~~~l~~A~vgIam 710 (1001)
...+..|.+.++. +.-..+.+++|||...|+.+.+.+...|.+
T Consensus 82 ~~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~ 128 (320)
T TIGR01686 82 SINWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTL 128 (320)
T ss_pred EEecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCcc
Confidence 1223344444443 333357899999999999999998887654
No 153
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=94.56 E-value=0.04 Score=54.59 Aligned_cols=116 Identities=20% Similarity=0.255 Sum_probs=71.1
Q ss_pred CCcHHHHHHHHHHHhCCc-EEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeC
Q 001877 592 PPREEVKNAMLSCMTAGI-RVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi-~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 670 (1001)
|+.|+..++|+.+++.|- .++++|--|.-....+.+..|+..-.. .+.+....-+-.......-.+...-+.+|.
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~----~IfTNPa~~da~G~L~v~pyH~~hsC~~CP 159 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFS----EIFTNPACVDASGRLLVRPYHTQHSCNLCP 159 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHH----HHhcCCcccCCCCcEEeecCCCCCccCcCc
Confidence 678999999999999997 999999999999999998888754211 111111000000000000000001122322
Q ss_pred hh-hHHHHHHHHhcc-------CCEEEEEeCCccC-HHHHhcCCceEEec
Q 001877 671 PS-HKRMLVEALQNQ-------NEVVAMTGDGVND-APALKKADIGIAMG 711 (1001)
Q Consensus 671 p~-~K~~~v~~l~~~-------~~~v~~iGDg~ND-~~~l~~A~vgIam~ 711 (1001)
+. =|..++..++.. -+.+..+|||.|| ||+++...--+||-
T Consensus 160 sNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 160 SNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred hhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 22 266666665432 2378999999999 88888888778874
No 154
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=94.30 E-value=0.095 Score=57.98 Aligned_cols=100 Identities=16% Similarity=0.051 Sum_probs=60.8
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCC---------------CHHHHHHHHHHhCCCCcccccccccccchhhccCChHH
Q 001877 591 DPPREEVKNAMLSCMTAGIRVIVVTGD---------------NKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQ 655 (1001)
Q Consensus 591 d~~~~~~~~~I~~l~~~gi~v~~~TGd---------------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~ 655 (1001)
-++.|++.++++.|+++|++++++|+- ....+..+.+..|+... ...+......+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd-----~i~i~~~~~sd----- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFD-----EVLICPHFPED----- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCcee-----eEEEeCCcCcc-----
Confidence 367899999999999999999999983 23345666777777410 00010000000
Q ss_pred HHHhhccceEEEEeChh--hHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEE
Q 001877 656 QTVALQHMALFTRVEPS--HKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA 709 (1001)
Q Consensus 656 ~~~~~~~~~v~~r~~p~--~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa 709 (1001)
...+| .|+ -=..+.+.+.-..+.+.||||+.+|..+-+.|++...
T Consensus 99 --------~~~~r-KP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 99 --------NCSCR-KPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred --------cCCCC-CCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 00011 121 1112222232335789999999999999999999754
No 155
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=94.22 E-value=0.066 Score=56.72 Aligned_cols=66 Identities=18% Similarity=0.239 Sum_probs=47.7
Q ss_pred EeChhhHHHHHHHHhcc----CCEEEEEeCCccCHHHHhcC--------CceEEecCccHHHHhhcCeeecCCCchHHHH
Q 001877 668 RVEPSHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKA--------DIGIAMGSGTAVAKSASDMVLADDNFATIVA 735 (1001)
Q Consensus 668 r~~p~~K~~~v~~l~~~----~~~v~~iGDg~ND~~~l~~A--------~vgIam~~~~~~~~~~ad~v~~~~~~~~i~~ 735 (1001)
+-.+.+|...++.+.+. ...++++||+.||.+|++.+ +.||+|+.+ ..+..|++++.+ ...+..
T Consensus 162 ~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g--~~~~~A~~~~~~--~~~v~~ 237 (244)
T TIGR00685 162 KPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSG--SKKTVAKFHLTG--PQQVLE 237 (244)
T ss_pred eeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecC--CcCCCceEeCCC--HHHHHH
Confidence 34456898888876553 35789999999999999999 578888533 245668998874 444555
Q ss_pred HH
Q 001877 736 AV 737 (1001)
Q Consensus 736 ~i 737 (1001)
.+
T Consensus 238 ~L 239 (244)
T TIGR00685 238 FL 239 (244)
T ss_pred HH
Confidence 44
No 156
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=93.80 E-value=0.078 Score=54.81 Aligned_cols=95 Identities=13% Similarity=0.069 Sum_probs=57.8
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHH--HHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEe
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKST--AESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRV 669 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~--a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~ 669 (1001)
++.|++.+.++.|+++|+++.++|+..... ........++.... ..++...+. ...
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f----d~v~~s~~~------------------~~~ 151 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF----DAVVESCLE------------------GLR 151 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC----CEEEEeeec------------------CCC
Confidence 578999999999999999999999875433 22222333432211 001100000 001
Q ss_pred Chh--hHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceE
Q 001877 670 EPS--HKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI 708 (1001)
Q Consensus 670 ~p~--~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgI 708 (1001)
.|+ -=..+++.+.-..+.+++|||...|+.+-+.||+-.
T Consensus 152 KP~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 152 KPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred CCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEE
Confidence 222 223334444444567889999999999999999864
No 157
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=93.53 E-value=0.33 Score=46.62 Aligned_cols=101 Identities=17% Similarity=0.154 Sum_probs=68.8
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHH---HHHHh-----CCCCcccccccccccc-hh-hccCChHHHHHhh
Q 001877 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAES---ICHKI-----GAFDHLVDFVGRSYTA-SE-FEELPAMQQTVAL 660 (1001)
Q Consensus 591 d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~---ia~~~-----gi~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~ 660 (1001)
|..++++.+..+.++++|++++.+|+|+.-.+.. ..++. ++.. |.++.. +. +..+..
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~------Gpv~~sP~~l~~al~r------- 92 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPD------GPVLLSPDSLFSALHR------- 92 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCC------CCEEECCcchhhhhhc-------
Confidence 6899999999999999999999999999665543 33333 3332 211111 10 111111
Q ss_pred ccceEEEEeChhhHHHHHHHHhcc-----CCEEEEEeCCccCHHHHhcCCce
Q 001877 661 QHMALFTRVEPSHKRMLVEALQNQ-----NEVVAMTGDGVNDAPALKKADIG 707 (1001)
Q Consensus 661 ~~~~v~~r~~p~~K~~~v~~l~~~-----~~~v~~iGDg~ND~~~l~~A~vg 707 (1001)
.+..+-..+.|...++.++.. ....+..|+..+|+.+.+++++.
T Consensus 93 ---Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 93 ---EVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred ---cccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 133444456798888888764 45678899999999999998875
No 158
>PLN02645 phosphoglycolate phosphatase
Probab=93.53 E-value=0.19 Score=55.40 Aligned_cols=48 Identities=17% Similarity=0.203 Sum_probs=38.8
Q ss_pred EEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHH---HHhCCC
Q 001877 585 GLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESIC---HKIGAF 632 (1001)
Q Consensus 585 G~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia---~~~gi~ 632 (1001)
|.+.-.+.+-|++.++|++|+++|++++++|+++..+...++ +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 344445677799999999999999999999999977777776 556764
No 159
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=93.51 E-value=0.2 Score=51.26 Aligned_cols=96 Identities=16% Similarity=0.125 Sum_probs=60.2
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHH-hCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeC
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHK-IGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 670 (1001)
++.|++.++++.|+++|+++.++|.-+.......... .++.... ..++...+.. ...
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~f----d~v~~s~~~~------------------~~K 141 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAA----DHIYLSQDLG------------------MRK 141 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhc----CEEEEecccC------------------CCC
Confidence 4689999999999999999999999887655433222 2332211 1111111110 012
Q ss_pred h--hhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEE
Q 001877 671 P--SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA 709 (1001)
Q Consensus 671 p--~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa 709 (1001)
| +-=..+++.+.-..+.+++|||...|+.+-+.||+...
T Consensus 142 P~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i 182 (199)
T PRK09456 142 PEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSI 182 (199)
T ss_pred CCHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEE
Confidence 2 11233444444456789999999999999999998643
No 160
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=92.99 E-value=0.33 Score=47.38 Aligned_cols=86 Identities=17% Similarity=0.148 Sum_probs=66.9
Q ss_pred cCCCcHHHHHHHHHHHhCCc--EEEEEcCC-------CHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhh
Q 001877 590 LDPPREEVKNAMLSCMTAGI--RVIVVTGD-------NKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVAL 660 (1001)
Q Consensus 590 ~d~~~~~~~~~I~~l~~~gi--~v~~~TGd-------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (1001)
++++.++..+.+++|++.+. +|+++|.. +...|..+.+.+|+..-
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpvl-------------------------- 110 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPVL-------------------------- 110 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcEE--------------------------
Confidence 57889999999999999877 59999987 48899999999997631
Q ss_pred ccceEEEEeChhhHHHHHHHHhcc-----CCEEEEEeCC-ccCHHHHhcCC
Q 001877 661 QHMALFTRVEPSHKRMLVEALQNQ-----NEVVAMTGDG-VNDAPALKKAD 705 (1001)
Q Consensus 661 ~~~~v~~r~~p~~K~~~v~~l~~~-----~~~v~~iGDg-~ND~~~l~~A~ 705 (1001)
.+....|.-..++.+.++.+ .+.+++|||- ..|+-|=...|
T Consensus 111 ----~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G 157 (168)
T PF09419_consen 111 ----RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMG 157 (168)
T ss_pred ----EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccC
Confidence 11224676667888888754 6789999997 47887766555
No 161
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=92.93 E-value=0.19 Score=44.81 Aligned_cols=49 Identities=18% Similarity=0.213 Sum_probs=35.9
Q ss_pred EEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHH---HHhCCCC
Q 001877 585 GLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESIC---HKIGAFD 633 (1001)
Q Consensus 585 G~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia---~~~gi~~ 633 (1001)
|++.-.+++-|++.++|+.|+++|++++++|..+..+...++ +++|+..
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~ 58 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPV 58 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT-
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCC
Confidence 444556788999999999999999999999998866655555 5567653
No 162
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=92.81 E-value=0.32 Score=49.00 Aligned_cols=96 Identities=16% Similarity=0.183 Sum_probs=63.7
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeCh
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (1001)
++.+++.+++++|+ .+++++|+.+...+....+++|+..... .++..++...- .....|
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd----~i~~~~~~~~~--------------~~~~KP 142 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFD----GIFCFDTANPD--------------YLLPKP 142 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhC----eEEEeecccCc--------------cCCCCC
Confidence 46789999999998 4789999999999999999999864321 11111111000 000123
Q ss_pred --hhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceE
Q 001877 672 --SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI 708 (1001)
Q Consensus 672 --~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgI 708 (1001)
+-=..+++.+....+.+++|||...|+.+-+.||+..
T Consensus 143 ~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 143 SPQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred CHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 2223444555555678899999999999999998764
No 163
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=92.36 E-value=0.76 Score=53.55 Aligned_cols=100 Identities=17% Similarity=0.061 Sum_probs=63.5
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHH-hCCCCcccc---c-ccccccchhhccCChHHHHHhhccceEEE
Q 001877 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHK-IGAFDHLVD---F-VGRSYTASEFEELPAMQQTVALQHMALFT 667 (1001)
Q Consensus 593 ~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~-~gi~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (1001)
+++++.+. +++.|.+ +++|+-...-++.+|++ +|++.-... . .+..++|.-... .
T Consensus 111 l~~~a~~~---~~~~g~~-vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g~----------------~ 170 (497)
T PLN02177 111 VHPETWRV---FNSFGKR-YIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKKP----------------G 170 (497)
T ss_pred cCHHHHHH---HHhCCCE-EEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecCC----------------C
Confidence 56665554 4567755 99999999999999987 898752111 0 011111110000 0
Q ss_pred EeChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEEecC
Q 001877 668 RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGS 712 (1001)
Q Consensus 668 r~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIam~~ 712 (1001)
.+.-++|.+.++..........+.||+.||.|||+.|+-+.+++.
T Consensus 171 ~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 171 VLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred CCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 033466888777433211223678999999999999999999974
No 164
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=92.29 E-value=0.28 Score=49.55 Aligned_cols=90 Identities=13% Similarity=0.093 Sum_probs=61.4
Q ss_pred HHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeChhhHHHH
Q 001877 598 KNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRML 677 (1001)
Q Consensus 598 ~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~ 677 (1001)
.+.++.|++. +++.++||.....+....++.|+..... .+++.++... .+-.|+-=..+
T Consensus 93 ~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd----~i~~~~~~~~----------------~KP~p~~~~~~ 151 (188)
T PRK10725 93 IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFD----AVVAADDVQH----------------HKPAPDTFLRC 151 (188)
T ss_pred HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHce----EEEehhhccC----------------CCCChHHHHHH
Confidence 5889999875 8999999999999999999999865321 1222221110 01122223444
Q ss_pred HHHHhccCCEEEEEeCCccCHHHHhcCCceE
Q 001877 678 VEALQNQNEVVAMTGDGVNDAPALKKADIGI 708 (1001)
Q Consensus 678 v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgI 708 (1001)
.+.++-..+.+++|||..+|+.+-+.||+-.
T Consensus 152 ~~~~~~~~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 152 AQLMGVQPTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred HHHcCCCHHHeEEEeccHhhHHHHHHCCCEE
Confidence 4555544567889999999999999999864
No 165
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=91.71 E-value=0.34 Score=50.48 Aligned_cols=97 Identities=15% Similarity=0.184 Sum_probs=64.4
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeCh
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (1001)
++.|++.+.++.| ++++.++|+.+...+...-+..|+.....+ .++++.+...- +-.|
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~---~v~~~~~~~~~----------------KP~p 145 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPD---KLFSGYDIQRW----------------KPDP 145 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcc---eEeeHHhcCCC----------------CCCh
Confidence 4567999999988 489999999998888888888888653211 11222111100 0112
Q ss_pred hhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEEe
Q 001877 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAM 710 (1001)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIam 710 (1001)
+-=..+.+.+.-..+.+++|||+.+|+.+-+.||+.+..
T Consensus 146 ~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 146 ALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 222334444444456799999999999999999998753
No 166
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=91.68 E-value=0.96 Score=48.00 Aligned_cols=46 Identities=9% Similarity=-0.001 Sum_probs=39.2
Q ss_pred ccCCCcHHHHHHHHHHHhCCcEEEEEcC---CCHHHHHHHHHHhCCCCc
Q 001877 589 MLDPPREEVKNAMLSCMTAGIRVIVVTG---DNKSTAESICHKIGAFDH 634 (1001)
Q Consensus 589 ~~d~~~~~~~~~I~~l~~~gi~v~~~TG---d~~~~a~~ia~~~gi~~~ 634 (1001)
-.+.+-+++.++|++|+++|++++++|| ++........+++|+...
T Consensus 14 ~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~ 62 (249)
T TIGR01457 14 KGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT 62 (249)
T ss_pred cCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 3466667999999999999999999996 888888888889998643
No 167
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=91.23 E-value=0.69 Score=42.91 Aligned_cols=33 Identities=18% Similarity=0.239 Sum_probs=29.5
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHH
Q 001877 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAE 623 (1001)
Q Consensus 591 d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~ 623 (1001)
+++.+++.+++++++++|++++++|||+.....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 678899999999999999999999999976543
No 168
>PHA02597 30.2 hypothetical protein; Provisional
Probab=90.57 E-value=0.44 Score=48.55 Aligned_cols=94 Identities=12% Similarity=0.100 Sum_probs=56.0
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeCh
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (1001)
++.|++.+.+++|++.+ +.+++|..+........+.+|+........+.+ +.++...
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i----------------------~~~~~~~ 130 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEV----------------------LMCGHDE 130 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEE----------------------EEeccCc
Confidence 46889999999999986 566677755555444556666643210000111 1122211
Q ss_pred hhHHHHHHH-Hhcc-CCEEEEEeCCccCHHHHhcC--CceEE
Q 001877 672 SHKRMLVEA-LQNQ-NEVVAMTGDGVNDAPALKKA--DIGIA 709 (1001)
Q Consensus 672 ~~K~~~v~~-l~~~-~~~v~~iGDg~ND~~~l~~A--~vgIa 709 (1001)
.|.+++.. +++. .+.+++|||..+|+.+-++| |+-..
T Consensus 131 -~kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i 171 (197)
T PHA02597 131 -SKEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVI 171 (197)
T ss_pred -ccHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEE
Confidence 13333332 2222 35688999999999999999 99643
No 169
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=90.47 E-value=0.8 Score=47.59 Aligned_cols=99 Identities=19% Similarity=0.218 Sum_probs=76.1
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeC
Q 001877 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (1001)
Q Consensus 591 d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 670 (1001)
.++.|++.+.++.|++.|+.+.+.|+.+...+..+.+..|+.... ..++++.+...- +=.
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f----~~~v~~~dv~~~----------------KP~ 144 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYF----DVIVTADDVARG----------------KPA 144 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhc----chhccHHHHhcC----------------CCC
Confidence 478899999999999999999999999999999999999998654 222333322111 122
Q ss_pred hhhHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEE
Q 001877 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA 709 (1001)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa 709 (1001)
|+-=....+.|.-....+.++.|+.|.+.+-++||.-+-
T Consensus 145 Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv 183 (221)
T COG0637 145 PDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVV 183 (221)
T ss_pred CHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEE
Confidence 444456666666567789999999999999999998754
No 170
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=89.78 E-value=0.42 Score=45.65 Aligned_cols=90 Identities=21% Similarity=0.283 Sum_probs=59.2
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEcCCCHHH----HHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEE
Q 001877 593 PREEVKNAMLSCMTAGIRVIVVTGDNKST----AESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR 668 (1001)
Q Consensus 593 ~~~~~~~~I~~l~~~gi~v~~~TGd~~~~----a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 668 (1001)
+++-+++.|..-++.|=+++.+|||.+.. +..+|+...|.+.+ .++|+.
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~---------------------------pv~f~G 167 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMN---------------------------PVIFAG 167 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCc---------------------------ceeecc
Confidence 56667788888899999999999998654 45556666664432 123433
Q ss_pred eChh-hHHHHHHHHhccCCEEEEEeCCccCHHHHhcCCc-eEEe
Q 001877 669 VEPS-HKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI-GIAM 710 (1001)
Q Consensus 669 ~~p~-~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~v-gIam 710 (1001)
..|. .+..-...+|+++-. ..-||+.||+.|-+.|++ ||-+
T Consensus 168 dk~k~~qy~Kt~~i~~~~~~-IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 168 DKPKPGQYTKTQWIQDKNIR-IHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CCCCcccccccHHHHhcCce-EEecCCchhhhHHHhcCccceeE
Confidence 3331 222234455666544 445999999999999987 4543
No 171
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=89.56 E-value=0.67 Score=48.34 Aligned_cols=89 Identities=16% Similarity=0.174 Sum_probs=56.6
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHH---HHHHHHHHhCCCCcccccccccccchhh-ccCChHHHHHhhccceEE
Q 001877 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKS---TAESICHKIGAFDHLVDFVGRSYTASEF-EELPAMQQTVALQHMALF 666 (1001)
Q Consensus 591 d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~---~a~~ia~~~gi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~ 666 (1001)
++.-|++.+.++.+++.|++|+++|||+.. .+..=.++.|..... ...+.+..- ..
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~----~l~lr~~~~~~~---------------- 173 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWD----HLILRPDKDPSK---------------- 173 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBS----CGEEEEESSTSS----------------
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccc----hhcccccccccc----------------
Confidence 356678999999999999999999999865 333335666754321 111111100 00
Q ss_pred EEeChhhHHHHHHHHhccC-CEEEEEeCCccCHHH
Q 001877 667 TRVEPSHKRMLVEALQNQN-EVVAMTGDGVNDAPA 700 (1001)
Q Consensus 667 ~r~~p~~K~~~v~~l~~~~-~~v~~iGDg~ND~~~ 700 (1001)
....+.|...-+.+++.| ++++.+||..+|..-
T Consensus 174 -~~~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 174 -KSAVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp -------SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred -ccccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 001234777778887775 567889999999864
No 172
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=87.36 E-value=3.4 Score=43.56 Aligned_cols=44 Identities=18% Similarity=0.254 Sum_probs=32.9
Q ss_pred cCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHH---HHHhCCCC
Q 001877 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESI---CHKIGAFD 633 (1001)
Q Consensus 590 ~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~i---a~~~gi~~ 633 (1001)
+.|.-|++.+..+.+++.|++|+++|||....-... .++.|...
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~ 189 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHT 189 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCC
Confidence 456778999999999999999999999996432222 23456653
No 173
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=87.30 E-value=1.9 Score=42.57 Aligned_cols=51 Identities=16% Similarity=0.211 Sum_probs=43.1
Q ss_pred EEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHH---HhCCC
Q 001877 582 TFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICH---KIGAF 632 (1001)
Q Consensus 582 ~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~---~~gi~ 632 (1001)
.+-|.+.++|..-|++.|++++|+.++.+|..+|.-..++-+.+.+ ++|+.
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 4569999999999999999999999999999999887777666655 45654
No 174
>PLN02151 trehalose-phosphatase
Probab=86.42 E-value=4.1 Score=45.05 Aligned_cols=49 Identities=16% Similarity=0.200 Sum_probs=37.8
Q ss_pred CCCcEEEEEecccCC--CcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHH
Q 001877 578 EKDLTFIGLVGMLDP--PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICH 627 (1001)
Q Consensus 578 e~~l~~lG~i~~~d~--~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~ 627 (1001)
..|.+++-+.---|. +.+++.++|++|. ++..++++|||+......+..
T Consensus 104 DyDGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~ 154 (354)
T PLN02151 104 DYDGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRCREKVSSFVK 154 (354)
T ss_pred ecCccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEEECCCHHHHHHHcC
Confidence 456676655433333 7899999999999 567999999999999887764
No 175
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=86.41 E-value=1.3 Score=47.16 Aligned_cols=42 Identities=7% Similarity=0.064 Sum_probs=39.1
Q ss_pred Cc-HHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCc
Q 001877 593 PR-EEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDH 634 (1001)
Q Consensus 593 ~~-~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~ 634 (1001)
+| |++.+++++|+++|++++++|+.....+....+++|+...
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~Y 188 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRY 188 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcc
Confidence 55 9999999999999999999999999999999999999864
No 176
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=85.16 E-value=1.4 Score=46.34 Aligned_cols=91 Identities=13% Similarity=0.129 Sum_probs=56.0
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeCh
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (1001)
++-|++.++++.|++. +++.++|..+.. .+..|+..... .++...+. .+..|
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd----~i~~~~~~------------------~~~KP 164 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFE----FVLRAGPH------------------GRSKP 164 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhc----eeEecccC------------------CcCCC
Confidence 4668999999999975 899999886654 25566643211 11111111 01122
Q ss_pred h--hHHHHHHHHhccCCEEEEEeCC-ccCHHHHhcCCceEEe
Q 001877 672 S--HKRMLVEALQNQNEVVAMTGDG-VNDAPALKKADIGIAM 710 (1001)
Q Consensus 672 ~--~K~~~v~~l~~~~~~v~~iGDg-~ND~~~l~~A~vgIam 710 (1001)
. -=..+.+.+.-..+.++||||+ ..|+.+-+.||+-...
T Consensus 165 ~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~ 206 (238)
T PRK10748 165 FSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACW 206 (238)
T ss_pred cHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEE
Confidence 2 1122333344345689999999 5999999999987654
No 177
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=84.37 E-value=4.1 Score=44.04 Aligned_cols=44 Identities=11% Similarity=0.084 Sum_probs=34.1
Q ss_pred cCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHH---HHHHhCCCC
Q 001877 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAES---ICHKIGAFD 633 (1001)
Q Consensus 590 ~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~---ia~~~gi~~ 633 (1001)
.+.+-+++.++|++|+++|++++++|+++..+... -.+++|+..
T Consensus 16 ~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~ 62 (279)
T TIGR01452 16 GERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNG 62 (279)
T ss_pred CCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 56677889999999999999999999987554444 345567643
No 178
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=83.63 E-value=4.8 Score=42.27 Aligned_cols=60 Identities=27% Similarity=0.339 Sum_probs=29.7
Q ss_pred EeChhhHHHHHHHHhcc-C------CEEEEEeCCccCHHHHhcC------CceEEecCcc-HHHHhhcCeeecC
Q 001877 668 RVEPSHKRMLVEALQNQ-N------EVVAMTGDGVNDAPALKKA------DIGIAMGSGT-AVAKSASDMVLAD 727 (1001)
Q Consensus 668 r~~p~~K~~~v~~l~~~-~------~~v~~iGDg~ND~~~l~~A------~vgIam~~~~-~~~~~~ad~v~~~ 727 (1001)
|..-..|..+++.+-+. + ..++++||...|-.|++.. +++|-++..+ .....+|+|-+.+
T Consensus 160 rp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 160 RPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp E-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred EeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 43444699999887654 3 3689999999999999774 5677777543 3333456665544
No 179
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=83.46 E-value=3.4 Score=43.02 Aligned_cols=93 Identities=16% Similarity=0.235 Sum_probs=62.2
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeCh
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (1001)
++-+++.++++.+++. ++++++|.-....+....+++|+...... ++...+ .....|
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~----v~~s~~------------------~g~~KP 155 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDA----VFISED------------------VGVAKP 155 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhhe----EEEecc------------------cccCCC
Confidence 5678899999999998 99999999888889999999997653211 111111 111334
Q ss_pred hhH--HHHHHHHhccCCEEEEEeCC-ccCHHHHhcCCce
Q 001877 672 SHK--RMLVEALQNQNEVVAMTGDG-VNDAPALKKADIG 707 (1001)
Q Consensus 672 ~~K--~~~v~~l~~~~~~v~~iGDg-~ND~~~l~~A~vg 707 (1001)
+.+ ..+.+.+.-..+.+++|||+ .||+..-+.+|.-
T Consensus 156 ~~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~ 194 (229)
T COG1011 156 DPEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMK 194 (229)
T ss_pred CcHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcE
Confidence 332 23344444446789999996 5785666777764
No 180
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=83.26 E-value=1.3 Score=47.18 Aligned_cols=40 Identities=18% Similarity=0.135 Sum_probs=33.2
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEcCCCHHH---HHHHHHHhCCC
Q 001877 593 PREEVKNAMLSCMTAGIRVIVVTGDNKST---AESICHKIGAF 632 (1001)
Q Consensus 593 ~~~~~~~~I~~l~~~gi~v~~~TGd~~~~---a~~ia~~~gi~ 632 (1001)
+-|++.++|++|+++|++++++||++..+ .....+++|+.
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 78899999999999999999999988776 44445566764
No 181
>PRK10444 UMP phosphatase; Provisional
Probab=82.60 E-value=1.2 Score=47.10 Aligned_cols=45 Identities=9% Similarity=0.217 Sum_probs=39.4
Q ss_pred EEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHh
Q 001877 585 GLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKI 629 (1001)
Q Consensus 585 G~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~ 629 (1001)
|.+.-.+.+-|++.++|++|+++|++++++|++...+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 445556788999999999999999999999999999888888775
No 182
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=81.99 E-value=8.3 Score=40.14 Aligned_cols=133 Identities=17% Similarity=0.205 Sum_probs=72.7
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchh---hccCChHHHHHhhccceEEE
Q 001877 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASE---FEELPAMQQTVALQHMALFT 667 (1001)
Q Consensus 591 d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~v~~ 667 (1001)
-.+|+++.+.++.|++.+|.+.++|+.=..-...+.++.|...++..+.+.-+.-++ +..+..+ +
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~-l----------- 156 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGP-L----------- 156 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS-------------
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCC-c-----------
Confidence 358999999999999999999999999888888888888877665432222111110 0000000 0
Q ss_pred EeChhhHHHH-------HHHHhccCCEEEEEeCCccCHHHHhcC---CceEEec--CccH-----HHHhhcCeeecCCCc
Q 001877 668 RVEPSHKRML-------VEALQNQNEVVAMTGDGVNDAPALKKA---DIGIAMG--SGTA-----VAKSASDMVLADDNF 730 (1001)
Q Consensus 668 r~~p~~K~~~-------v~~l~~~~~~v~~iGDg~ND~~~l~~A---~vgIam~--~~~~-----~~~~~ad~v~~~~~~ 730 (1001)
..+-.|.+- -+.++. ...|+..||+.-|+.|-.-. +.-+.+| |..- .-+++=|+|+.+|.-
T Consensus 157 -IH~~NKn~~~l~~~~~~~~~~~-R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~t 234 (246)
T PF05822_consen 157 -IHTFNKNESALEDSPYFKQLKK-RTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQT 234 (246)
T ss_dssp ---TT-HHHHHHTTHHHHHCTTT---EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B
T ss_pred -eEEeeCCcccccCchHHHHhcc-CCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCC
Confidence 011223221 122222 35677789999999996554 4444555 4432 334567999998887
Q ss_pred hHHHHHH
Q 001877 731 ATIVAAV 737 (1001)
Q Consensus 731 ~~i~~~i 737 (1001)
-.++..|
T Consensus 235 m~v~~~i 241 (246)
T PF05822_consen 235 MDVPNAI 241 (246)
T ss_dssp -HHHHHH
T ss_pred chHHHHH
Confidence 6776665
No 183
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=81.92 E-value=2.6 Score=44.93 Aligned_cols=42 Identities=10% Similarity=-0.022 Sum_probs=38.2
Q ss_pred Cc-HHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCc
Q 001877 593 PR-EEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDH 634 (1001)
Q Consensus 593 ~~-~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~ 634 (1001)
+| |++.+++++|+++|+++.++|+.+...+....+++|+...
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~y 190 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGY 190 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCcc
Confidence 35 9999999999999999999998888889999999999754
No 184
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=81.75 E-value=2 Score=42.40 Aligned_cols=97 Identities=26% Similarity=0.334 Sum_probs=57.4
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhh-----ccceEEE
Q 001877 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVAL-----QHMALFT 667 (1001)
Q Consensus 593 ~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~~ 667 (1001)
+.+++.+++..++++|++++|+|.-+ |+.... .+...+..++........ -+...+|
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQs-----------Gi~rgy-------f~~~~f~~~~~~m~~~l~~~gv~id~i~~C 93 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQS-----------GIGRGY-------FTEADFDKLHNKMLKILASQGVKIDGILYC 93 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECCC-----------CccccC-------ccHHHHHHHHHHHHHHHHHcCCccceEEEC
Confidence 57899999999999999999999632 222211 111111111110000000 0112333
Q ss_pred EeChh--------hHHHHHHHHhccC---CEEEEEeCCccCHHHHhcCCce
Q 001877 668 RVEPS--------HKRMLVEALQNQN---EVVAMTGDGVNDAPALKKADIG 707 (1001)
Q Consensus 668 r~~p~--------~K~~~v~~l~~~~---~~v~~iGDg~ND~~~l~~A~vg 707 (1001)
.-.|+ ....+.+.+++.+ ....+|||...|..+-..|+++
T Consensus 94 ph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 94 PHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred CCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 33333 3455566666654 6889999999999999999887
No 185
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=80.47 E-value=1.1 Score=43.99 Aligned_cols=94 Identities=12% Similarity=0.067 Sum_probs=62.7
Q ss_pred ccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEE
Q 001877 589 MLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR 668 (1001)
Q Consensus 589 ~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 668 (1001)
+.=..||++.+.++.|.+. .++++.|......|..+.+.++....... . +++|
T Consensus 39 ~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~---~-----------------------~l~r 91 (162)
T TIGR02251 39 VYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVIS---R-----------------------RLYR 91 (162)
T ss_pred EEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEe---E-----------------------EEEc
Confidence 3346899999999999988 99999999999999999999986541110 0 1111
Q ss_pred e-ChhhHHHHHHHH---hccCCEEEEEeCCccCHHHHhcCCceEE
Q 001877 669 V-EPSHKRMLVEAL---QNQNEVVAMTGDGVNDAPALKKADIGIA 709 (1001)
Q Consensus 669 ~-~p~~K~~~v~~l---~~~~~~v~~iGDg~ND~~~l~~A~vgIa 709 (1001)
- ....|...++.| ......|++|||...|..+-+.+++-|.
T Consensus 92 ~~~~~~~~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~ 136 (162)
T TIGR02251 92 ESCVFTNGKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIK 136 (162)
T ss_pred cccEEeCCCEEeEchhcCCChhhEEEEeCChhhhccCccCEeecC
Confidence 0 000011122323 3344689999999998877666655544
No 186
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=78.14 E-value=2.2 Score=42.29 Aligned_cols=84 Identities=14% Similarity=0.238 Sum_probs=55.1
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeCh
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (1001)
++.|++.++++ ++.++|.-+........+++|+.... ..+++.++... ..|
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~f----d~v~~~~~~~~------------------~KP 140 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYF----DRAFSVDTVRA------------------YKP 140 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHH----hhhccHhhcCC------------------CCC
Confidence 46788888888 37899999999999999999986532 11222221111 123
Q ss_pred hhH--HHHHHHHhccCCEEEEEeCCccCHHHHhcC
Q 001877 672 SHK--RMLVEALQNQNEVVAMTGDGVNDAPALKKA 704 (1001)
Q Consensus 672 ~~K--~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A 704 (1001)
+-. ..+.+.+.-..+.++||||+..|+.+-+++
T Consensus 141 ~p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 141 DPVVYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred CHHHHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 222 444555555567899999999998876543
No 187
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=77.32 E-value=5.4 Score=42.38 Aligned_cols=109 Identities=15% Similarity=0.146 Sum_probs=71.0
Q ss_pred EEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhC----CCCcccccccccccchhhccCChHHHHHh
Q 001877 584 IGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIG----AFDHLVDFVGRSYTASEFEELPAMQQTVA 659 (1001)
Q Consensus 584 lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~g----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (1001)
=|.+.-.+++=|++.++|++|+++|++++.+|..+..+...+++++. ++... +.
T Consensus 16 DGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~----~~------------------ 73 (269)
T COG0647 16 DGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTP----DD------------------ 73 (269)
T ss_pred cCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCH----HH------------------
Confidence 36677788999999999999999999999999999888876665542 21111 00
Q ss_pred hccceEEEEeChhhHHHHHHHHhcc--CCEEEEEeCCccCHHHHhcCCceEEecCccHHHHhhcCeeecCCC
Q 001877 660 LQHMALFTRVEPSHKRMLVEALQNQ--NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDN 729 (1001)
Q Consensus 660 ~~~~~v~~r~~p~~K~~~v~~l~~~--~~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~~ad~v~~~~~ 729 (1001)
++ |+. ......++++ +..|.++|.+ .+...++.+|+-+.-.... ...|+|+...+
T Consensus 74 -----i~---TS~--~at~~~l~~~~~~~kv~viG~~-~l~~~l~~~G~~~~~~~~~----~~~d~Vv~g~d 130 (269)
T COG0647 74 -----IV---TSG--DATADYLAKQKPGKKVYVIGEE-GLKEELEGAGFELVDEEEP----ARVDAVVVGLD 130 (269)
T ss_pred -----ee---cHH--HHHHHHHHhhCCCCEEEEECCc-chHHHHHhCCcEEeccCCC----CcccEEEEecC
Confidence 11 111 1122333333 3699999954 6778889988877653222 11577775444
No 188
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=75.89 E-value=14 Score=39.24 Aligned_cols=48 Identities=15% Similarity=0.187 Sum_probs=36.4
Q ss_pred CcEEEEEec--ccCCCcHHHHHHHHHHHhC-CcEEEEEcCCCHHHHHHHHH
Q 001877 580 DLTFIGLVG--MLDPPREEVKNAMLSCMTA-GIRVIVVTGDNKSTAESICH 627 (1001)
Q Consensus 580 ~l~~lG~i~--~~d~~~~~~~~~I~~l~~~-gi~v~~~TGd~~~~a~~ia~ 627 (1001)
|.++..+.. ....+-++..+.+++|... ..-++++|||+.........
T Consensus 26 DGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~ 76 (266)
T COG1877 26 DGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG 76 (266)
T ss_pred cccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC
Confidence 334444333 3446889999999999887 55799999999999888776
No 189
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=74.33 E-value=15 Score=39.69 Aligned_cols=140 Identities=15% Similarity=0.153 Sum_probs=76.1
Q ss_pred ccCCCcHHHHHHHHHHHhCCcE---EEEEcCCCHHHHHH------HHHHhCCCCcccccc--------------------
Q 001877 589 MLDPPREEVKNAMLSCMTAGIR---VIVVTGDNKSTAES------ICHKIGAFDHLVDFV-------------------- 639 (1001)
Q Consensus 589 ~~d~~~~~~~~~I~~l~~~gi~---v~~~TGd~~~~a~~------ia~~~gi~~~~~~~~-------------------- 639 (1001)
+.++++++.++.++.+++.|++ .++.-||++..... .|+++|+........
T Consensus 12 iA~~i~~~lk~~i~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~ 91 (301)
T PRK14194 12 AAARVLAQVREDVRTLKAAGIEPALAVILVGNDPASQVYVRNKILRAEEAGIRSLEHRLPADTSQARLLALIAELNADPS 91 (301)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCC
Confidence 3456778888888888877766 35566777665433 466778765332211
Q ss_pred --cccccc------------------hhhccCChHHHHHhhccceEEEEeChhhHHHHHHHHhc--cCCEEEEEeCC-cc
Q 001877 640 --GRSYTA------------------SEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQN--QNEVVAMTGDG-VN 696 (1001)
Q Consensus 640 --~~~~~~------------------~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~--~~~~v~~iGDg-~N 696 (1001)
|..+.- ++.+-++..........-.-|.=|||..=.++++...- .|+.|+++|-| .-
T Consensus 92 V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~iv 171 (301)
T PRK14194 92 VNGILLQLPLPAHIDEARVLQAINPLKDVDGFHSENVGGLSQGRDVLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIV 171 (301)
T ss_pred CCeEEEeCCCCCCCCHHHHHhccCchhccCccChhhhhHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCcc
Confidence 111100 01111111111111111122334666655566655543 38999999997 33
Q ss_pred C---HHHHhcCCceEEec-C---ccHHHHhhcCeeecCC
Q 001877 697 D---APALKKADIGIAMG-S---GTAVAKSASDMVLADD 728 (1001)
Q Consensus 697 D---~~~l~~A~vgIam~-~---~~~~~~~~ad~v~~~~ 728 (1001)
= +.+|..+|..+.+- + ....+.+.||+++.--
T Consensus 172 G~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsav 210 (301)
T PRK14194 172 GKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAAV 210 (301)
T ss_pred HHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEec
Confidence 3 34577788877753 1 2234456789998643
No 190
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=73.59 E-value=7.6 Score=45.62 Aligned_cols=40 Identities=18% Similarity=0.283 Sum_probs=33.2
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEcCCCH------------HHHHHHHHHhCCC
Q 001877 593 PREEVKNAMLSCMTAGIRVIVVTGDNK------------STAESICHKIGAF 632 (1001)
Q Consensus 593 ~~~~~~~~I~~l~~~gi~v~~~TGd~~------------~~a~~ia~~~gi~ 632 (1001)
+-|++.++|+.|+++|++++++|.-.. ..+..+.+++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 468999999999999999999998655 3466777778764
No 191
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=71.43 E-value=16 Score=40.37 Aligned_cols=107 Identities=13% Similarity=0.112 Sum_probs=66.1
Q ss_pred cHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHh-C-------CCCcccccccccccchh----------hccCChH-
Q 001877 594 REEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKI-G-------AFDHLVDFVGRSYTASE----------FEELPAM- 654 (1001)
Q Consensus 594 ~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~-g-------i~~~~~~~~~~~~~~~~----------~~~~~~~- 654 (1001)
-|++.+.+++|+++|+++.++|+-+...+..+.+.+ | +.... ..++.+.. +.....+
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yF----D~IIt~a~KP~FF~~~~pf~~v~~~~ 261 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYF----DVVIVDARKPGFFTEGRPFRQVDVET 261 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhC----cEEEeCCCCCcccCCCCceEEEeCCC
Confidence 679999999999999999999999999999999996 6 32211 11222111 1100000
Q ss_pred ---HHHH--hhccceEEEEeChhhHHHHHHHHhccCCEEEEEeCC-ccCHHHHh-cCCce
Q 001877 655 ---QQTV--ALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDG-VNDAPALK-KADIG 707 (1001)
Q Consensus 655 ---~~~~--~~~~~~v~~r~~p~~K~~~v~~l~~~~~~v~~iGDg-~ND~~~l~-~A~vg 707 (1001)
.... .++...|++.-+- ..+.+.+...++.|++|||. ..|+-.-+ .++.-
T Consensus 262 g~~~~~~~~~l~~g~vY~gGn~---~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~ 318 (343)
T TIGR02244 262 GSLKWGEVDGLEPGKVYSGGSL---KQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWR 318 (343)
T ss_pred CcccCCccccccCCCeEeCCCH---HHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcE
Confidence 0000 0122234443322 34556666778999999997 46887665 56544
No 192
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=69.19 E-value=29 Score=37.59 Aligned_cols=62 Identities=15% Similarity=0.209 Sum_probs=38.5
Q ss_pred EEEeChhhHHHHHHHHhc--cCCEEEEEeCC-ccC---HHHHhcCCceEEecC----ccHHHHhhcCeeecC
Q 001877 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDG-VND---APALKKADIGIAMGS----GTAVAKSASDMVLAD 727 (1001)
Q Consensus 666 ~~r~~p~~K~~~v~~l~~--~~~~v~~iGDg-~ND---~~~l~~A~vgIam~~----~~~~~~~~ad~v~~~ 727 (1001)
|.=|||..=.++++...- .|+.|+++|-+ .-= +.+|..++..+.+-+ ..+.+...||+++.-
T Consensus 137 ~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~~~ADIVIsa 208 (296)
T PRK14188 137 LVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLPAVCRRADILVAA 208 (296)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHHHHHhcCCEEEEe
Confidence 344666555555555432 48999999954 333 345777888877642 234455678998864
No 193
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=66.07 E-value=10 Score=31.53 Aligned_cols=53 Identities=25% Similarity=0.288 Sum_probs=36.3
Q ss_pred HHHHHHHhccCCEEEEEeCC-ccCHHHHhcCCceEE-e--cC-ccHHH---HhhcCeeecC
Q 001877 675 RMLVEALQNQNEVVAMTGDG-VNDAPALKKADIGIA-M--GS-GTAVA---KSASDMVLAD 727 (1001)
Q Consensus 675 ~~~v~~l~~~~~~v~~iGDg-~ND~~~l~~A~vgIa-m--~~-~~~~~---~~~ad~v~~~ 727 (1001)
..+.+.+....+.++||||. ..|+.+-+++++--. + |. ..+.. ...+|+|+.+
T Consensus 11 ~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~ 71 (75)
T PF13242_consen 11 EQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDD 71 (75)
T ss_dssp HHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESS
T ss_pred HHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECC
Confidence 44555555556789999999 999999999998644 4 32 22222 2478888765
No 194
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=65.88 E-value=27 Score=35.84 Aligned_cols=86 Identities=12% Similarity=0.137 Sum_probs=57.2
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHH----HHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEE
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKST----AESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT 667 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~----a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (1001)
.+-|++.|.++-..+.|.+|..+|.|..+. +..=.++.|+..... +..++-
T Consensus 122 k~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~-------------------------~~~llk 176 (274)
T COG2503 122 KAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLE-------------------------SHLLLK 176 (274)
T ss_pred ccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccc-------------------------cceEEe
Confidence 456899999999999999999999998776 344456667765321 111222
Q ss_pred EeChhhHHHHHHHHhccCCEEEEEeCCccCHHHHhc
Q 001877 668 RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKK 703 (1001)
Q Consensus 668 r~~p~~K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~ 703 (1001)
-....|..--+.+++.-++|+.+||..+|-.....
T Consensus 177 -k~~k~Ke~R~~~v~k~~~iVm~vGDNl~DF~d~~~ 211 (274)
T COG2503 177 -KDKKSKEVRRQAVEKDYKIVMLVGDNLDDFGDNAY 211 (274)
T ss_pred -eCCCcHHHHHHHHhhccceeeEecCchhhhcchhh
Confidence 11223444444444456789999999999765444
No 195
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=65.85 E-value=45 Score=35.78 Aligned_cols=47 Identities=19% Similarity=0.335 Sum_probs=33.2
Q ss_pred ccCCCcHHHHHHHHHHHhCCcE---EEEEcCCCHHHHH------HHHHHhCCCCcc
Q 001877 589 MLDPPREEVKNAMLSCMTAGIR---VIVVTGDNKSTAE------SICHKIGAFDHL 635 (1001)
Q Consensus 589 ~~d~~~~~~~~~I~~l~~~gi~---v~~~TGd~~~~a~------~ia~~~gi~~~~ 635 (1001)
+.++++++.++.++.+++.|++ .++..||++.+.. ..|+++|+....
T Consensus 10 iA~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~ 65 (284)
T PRK14170 10 LAKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVL 65 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEE
Confidence 3456788888888888887775 4667788876653 347778876543
No 196
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=63.75 E-value=48 Score=35.54 Aligned_cols=138 Identities=11% Similarity=0.138 Sum_probs=73.0
Q ss_pred cCCCcHHHHHHHHHHHhCCcE---EEEEcCCCHHHHH------HHHHHhCCCCcccccc---------------------
Q 001877 590 LDPPREEVKNAMLSCMTAGIR---VIVVTGDNKSTAE------SICHKIGAFDHLVDFV--------------------- 639 (1001)
Q Consensus 590 ~d~~~~~~~~~I~~l~~~gi~---v~~~TGd~~~~a~------~ia~~~gi~~~~~~~~--------------------- 639 (1001)
.++++++.++.++.+++.|++ .++.-||++.+.. ..|+++|+........
T Consensus 10 a~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V 89 (282)
T PRK14169 10 SKKILADLKQTVAKLAQQDVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRSLMFRLPEATTQADLLAKVAELNHDPDV 89 (282)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCC
Confidence 346778888888888877765 3566787766553 3467788765432211
Q ss_pred -cccccch------------------hhccCChHHHHHhhccceEEEEeChhhHHHHHHHHhc--cCCEEEEEeCCcc--
Q 001877 640 -GRSYTAS------------------EFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQN--QNEVVAMTGDGVN-- 696 (1001)
Q Consensus 640 -~~~~~~~------------------~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~--~~~~v~~iGDg~N-- 696 (1001)
|..+.-. +.+-++............-|.=|||..=.++++.+.- .|+.|+.+|.+..
T Consensus 90 ~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVG 169 (282)
T PRK14169 90 DAILVQLPLPAGLDEQAVIDAIDPDKDVDGFSPVSVGRLWANEPTVVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVG 169 (282)
T ss_pred CEEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhHHHhcCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccch
Confidence 1111000 0111111111111111112334666665666665543 4889999999743
Q ss_pred --CHHHHhcCCceEEec-Ccc---HHHHhhcCeeecC
Q 001877 697 --DAPALKKADIGIAMG-SGT---AVAKSASDMVLAD 727 (1001)
Q Consensus 697 --D~~~l~~A~vgIam~-~~~---~~~~~~ad~v~~~ 727 (1001)
=+.||...+.-|.+- +-+ ......||+++..
T Consensus 170 kPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~A 206 (282)
T PRK14169 170 RPLAGLMVNHDATVTIAHSKTRNLKQLTKEADILVVA 206 (282)
T ss_pred HHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEc
Confidence 134565566555543 222 2344568998754
No 197
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=63.60 E-value=23 Score=34.82 Aligned_cols=98 Identities=14% Similarity=0.190 Sum_probs=56.3
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEc-CCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeC
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVT-GDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~T-Gd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 670 (1001)
.+-|+++++++.|++.|+++.++| -+.+.-|+.+.+.+++...... .. ...+.--+...-
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~----~~---------------~~~~~F~~~eI~ 105 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGD----GV---------------PLIEYFDYLEIY 105 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C-----------------------------CCECEEEES
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccc----cc---------------cchhhcchhhee
Confidence 467899999999999999999999 5789999999999999821100 00 011111233456
Q ss_pred hhhHHHHHHHHhcc----CCEEEEEeCCccCHHHHhcCCceEEe
Q 001877 671 PSHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAM 710 (1001)
Q Consensus 671 p~~K~~~v~~l~~~----~~~v~~iGDg~ND~~~l~~A~vgIam 710 (1001)
|..|..-.+.+++. -+.++++=|-...+...+. +||..
T Consensus 106 ~gsK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~~v~~--lGV~~ 147 (169)
T PF12689_consen 106 PGSKTTHFRRIHRKTGIPYEEMLFFDDESRNIEVVSK--LGVTC 147 (169)
T ss_dssp SS-HHHHHHHHHHHH---GGGEEEEES-HHHHHHHHT--TT-EE
T ss_pred cCchHHHHHHHHHhcCCChhHEEEecCchhcceeeEe--cCcEE
Confidence 77888888777654 2457777776554544443 55543
No 198
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=60.56 E-value=72 Score=34.32 Aligned_cols=62 Identities=16% Similarity=0.166 Sum_probs=37.0
Q ss_pred EEEeChhhHHHHHHHHhc--cCCEEEEEeCCccC----HHHHhc------CCceEEecCcc--HHHHhhcCeeecC
Q 001877 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDGVND----APALKK------ADIGIAMGSGT--AVAKSASDMVLAD 727 (1001)
Q Consensus 666 ~~r~~p~~K~~~v~~l~~--~~~~v~~iGDg~ND----~~~l~~------A~vgIam~~~~--~~~~~~ad~v~~~ 727 (1001)
|.=|||..=.++++..+- .|+.++.+|.|..= +-||.. |.|-++-.+.. ....+.||+++..
T Consensus 136 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~~l~~~~~~ADIVI~A 211 (286)
T PRK14184 136 FRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTPDLAEECREADFLFVA 211 (286)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCchhHHHHHHhCCEEEEe
Confidence 344677666666665543 38899999997432 335544 44555544322 2345678998864
No 199
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=60.22 E-value=8 Score=41.21 Aligned_cols=98 Identities=9% Similarity=0.068 Sum_probs=56.9
Q ss_pred cHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhc-cceEEEEeChh
Q 001877 594 REEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQ-HMALFTRVEPS 672 (1001)
Q Consensus 594 ~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~r~~p~ 672 (1001)
-++..++++.|++.|.++.++|+.+...........|+.... .. +..... +..++..-.|+
T Consensus 122 y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~~~-------------~~-----i~~~~~~~~~~~gKP~p~ 183 (257)
T TIGR01458 122 YQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGPFV-------------TA-----LEYATDTKATVVGKPSKT 183 (257)
T ss_pred HHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchHHH-------------HH-----HHHHhCCCceeecCCCHH
Confidence 478888999999999999999987765443222222221100 00 000000 11122222333
Q ss_pred hHHHHHHHHhccCCEEEEEeCCc-cCHHHHhcCCceEE
Q 001877 673 HKRMLVEALQNQNEVVAMTGDGV-NDAPALKKADIGIA 709 (1001)
Q Consensus 673 ~K~~~v~~l~~~~~~v~~iGDg~-ND~~~l~~A~vgIa 709 (1001)
-=..+.+.+....+.++||||.. +|+.+-+.+++--.
T Consensus 184 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i 221 (257)
T TIGR01458 184 FFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGI 221 (257)
T ss_pred HHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEE
Confidence 33344455544568899999996 99999999988644
No 200
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=60.14 E-value=18 Score=37.60 Aligned_cols=104 Identities=12% Similarity=0.107 Sum_probs=63.8
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeChh
Q 001877 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPS 672 (1001)
Q Consensus 593 ~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 672 (1001)
+-++..+++++||++|..+.++|--.... ..+-..+|+.... +.++.+-+.. -..|+
T Consensus 114 ~~~~~~~~lq~lR~~g~~l~iisN~d~r~-~~~l~~~~l~~~f----D~vv~S~e~g------------------~~KPD 170 (237)
T KOG3085|consen 114 YLDGMQELLQKLRKKGTILGIISNFDDRL-RLLLLPLGLSAYF----DFVVESCEVG------------------LEKPD 170 (237)
T ss_pred eccHHHHHHHHHHhCCeEEEEecCCcHHH-HHHhhccCHHHhh----hhhhhhhhhc------------------cCCCC
Confidence 44566699999999998888888655443 3666677775321 1111111110 02233
Q ss_pred hH--HHHHHHHhccCCEEEEEeCC-ccCHHHHhcCCceEE-ecCccHHHHh
Q 001877 673 HK--RMLVEALQNQNEVVAMTGDG-VNDAPALKKADIGIA-MGSGTAVAKS 719 (1001)
Q Consensus 673 ~K--~~~v~~l~~~~~~v~~iGDg-~ND~~~l~~A~vgIa-m~~~~~~~~~ 719 (1001)
-+ ...++.+.-+.+.++++||. .||...-+.+|.--- +.+.....++
T Consensus 171 p~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~~~~~ 221 (237)
T KOG3085|consen 171 PRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSITALKE 221 (237)
T ss_pred hHHHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEccccchhhh
Confidence 22 34556666678899999995 799999888876533 4454444444
No 201
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=59.45 E-value=48 Score=35.87 Aligned_cols=62 Identities=11% Similarity=0.141 Sum_probs=36.7
Q ss_pred EEEeChhhHHHHHHHHhc--cCCEEEEEeCCccC---HH-HHh------cCCceEEecCc--cHHHHhhcCeeecC
Q 001877 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDGVND---AP-ALK------KADIGIAMGSG--TAVAKSASDMVLAD 727 (1001)
Q Consensus 666 ~~r~~p~~K~~~v~~l~~--~~~~v~~iGDg~ND---~~-~l~------~A~vgIam~~~--~~~~~~~ad~v~~~ 727 (1001)
|.=|||..=.++++...- .|+.|+.+|.|..= .. ||. .|.|-++-.+. -......||+++..
T Consensus 138 ~~PcTp~ail~ll~~y~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l~~~~~~ADIvI~A 213 (295)
T PRK14174 138 FVSCTPYGILELLGRYNIETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHSATKDIPSYTRQADILIAA 213 (295)
T ss_pred cCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeCCchhHHHHHHhCCEEEEe
Confidence 334677665556655542 38999999998542 22 443 34555554422 23455678999865
No 202
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=59.32 E-value=74 Score=34.13 Aligned_cols=46 Identities=20% Similarity=0.335 Sum_probs=31.9
Q ss_pred cCCCcHHHHHHHHHHHhCCcE---EEEEcCCCHHHHH------HHHHHhCCCCcc
Q 001877 590 LDPPREEVKNAMLSCMTAGIR---VIVVTGDNKSTAE------SICHKIGAFDHL 635 (1001)
Q Consensus 590 ~d~~~~~~~~~I~~l~~~gi~---v~~~TGd~~~~a~------~ia~~~gi~~~~ 635 (1001)
.++++++.++.++.+++.|++ .++.-||++.+.. ..|+++|+....
T Consensus 10 A~~i~~~ik~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~ 64 (282)
T PRK14182 10 AAKVKGEVATEVRALAARGVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGITSVE 64 (282)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEE
Confidence 456778888888888887776 4566787776553 346778876543
No 203
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=59.03 E-value=48 Score=35.61 Aligned_cols=62 Identities=18% Similarity=0.191 Sum_probs=36.9
Q ss_pred EEEeChhhHHHHHHHHhc--cCCEEEEEeCCcc----CHHHHhcCCceEEec--Cc--cHHHHhhcCeeecC
Q 001877 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDGVN----DAPALKKADIGIAMG--SG--TAVAKSASDMVLAD 727 (1001)
Q Consensus 666 ~~r~~p~~K~~~v~~l~~--~~~~v~~iGDg~N----D~~~l~~A~vgIam~--~~--~~~~~~~ad~v~~~ 727 (1001)
|.=|||.-=.++++..+- .|+.|+.+|-|.. =+.||...+.-|.+- .. -......||+++.-
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~a 208 (285)
T PRK14189 137 FRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVAA 208 (285)
T ss_pred CcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEEc
Confidence 344666555555555432 3899999999855 244566666655542 21 22345678998864
No 204
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=58.98 E-value=49 Score=35.55 Aligned_cols=62 Identities=10% Similarity=0.201 Sum_probs=38.4
Q ss_pred EEEeChhhHHHHHHHHhc--cCCEEEEEeC-CccCHH---HHhcCCceEEec--Ccc--HHHHhhcCeeecC
Q 001877 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGD-GVNDAP---ALKKADIGIAMG--SGT--AVAKSASDMVLAD 727 (1001)
Q Consensus 666 ~~r~~p~~K~~~v~~l~~--~~~~v~~iGD-g~ND~~---~l~~A~vgIam~--~~~--~~~~~~ad~v~~~ 727 (1001)
|.=|||..=.++++...- .|+.++++|- |.-=.| +|..++.-|.+- ... ......||+++.-
T Consensus 137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~a 208 (284)
T PRK14179 137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVA 208 (284)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEe
Confidence 344667665555555443 3899999999 444444 567777777653 222 2345678999864
No 205
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=58.66 E-value=1.5e+02 Score=30.20 Aligned_cols=15 Identities=13% Similarity=0.361 Sum_probs=7.8
Q ss_pred ccccccCCCCCCCCc
Q 001877 804 SDVMKAKPRKVSEAV 818 (1001)
Q Consensus 804 ~~~~~~~P~~~~~~~ 818 (1001)
+++.+.+|+..+...
T Consensus 60 ~eli~~~~k~~~~~~ 74 (206)
T PF06570_consen 60 DELIKPLPKPKKKNK 74 (206)
T ss_pred HHHhccccCCccccc
Confidence 456666665544333
No 206
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=57.42 E-value=43 Score=37.02 Aligned_cols=49 Identities=20% Similarity=0.179 Sum_probs=38.1
Q ss_pred EEecccCCCcHHHHHHHHHHHhC----CcEEEEEcCCC---HHH-HHHHHHHhCCCC
Q 001877 585 GLVGMLDPPREEVKNAMLSCMTA----GIRVIVVTGDN---KST-AESICHKIGAFD 633 (1001)
Q Consensus 585 G~i~~~d~~~~~~~~~I~~l~~~----gi~v~~~TGd~---~~~-a~~ia~~~gi~~ 633 (1001)
|++.-.+++-+++.++++.|++. |+++..+|... ..+ +..+.+++|+.-
T Consensus 9 GvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~ 65 (321)
T TIGR01456 9 GVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDV 65 (321)
T ss_pred CceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCC
Confidence 55666788899999999999999 99999998665 443 455557788753
No 207
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=56.53 E-value=1.6e+02 Score=27.51 Aligned_cols=84 Identities=18% Similarity=0.247 Sum_probs=48.5
Q ss_pred ccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEE
Q 001877 589 MLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR 668 (1001)
Q Consensus 589 ~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 668 (1001)
+-+++.++..+.+++ |+.+.+....+.+......+.+.. ++++
T Consensus 3 i~~~~~~~~~~~l~~----~~~v~~~~~~~~~~~~~~l~~~d~---------------------------------ii~~ 45 (133)
T PF00389_consen 3 ITDPLPDEEIERLEE----GFEVEFCDSPSEEELAERLKDADA---------------------------------IIVG 45 (133)
T ss_dssp ESSS-SHHHHHHHHH----TSEEEEESSSSHHHHHHHHTTESE---------------------------------EEES
T ss_pred EeccCCHHHHHHHHC----CceEEEeCCCCHHHHHHHhCCCeE---------------------------------EEEc
Confidence 445666666665555 778888875544433333322211 3333
Q ss_pred eChhhHHHHHHHHhccCCEEEEEeCCcc--CHHHHhcCCceEEe
Q 001877 669 VEPSHKRMLVEALQNQNEVVAMTGDGVN--DAPALKKADIGIAM 710 (1001)
Q Consensus 669 ~~p~~K~~~v~~l~~~~~~v~~iGDg~N--D~~~l~~A~vgIam 710 (1001)
..+.--.++++.+ .+-+.+...|-|.| |..+++.-||-|+=
T Consensus 46 ~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~id~~~a~~~gI~V~n 88 (133)
T PF00389_consen 46 SGTPLTAEVLEAA-PNLKLISTAGAGVDNIDLEAAKERGIPVTN 88 (133)
T ss_dssp TTSTBSHHHHHHH-TT-SEEEESSSSCTTB-HHHHHHTTSEEEE
T ss_pred CCCCcCHHHHhcc-ceeEEEEEcccccCcccHHHHhhCeEEEEE
Confidence 3331224455555 34467888899988 88999999999884
No 208
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=56.02 E-value=85 Score=33.70 Aligned_cols=62 Identities=16% Similarity=0.200 Sum_probs=37.3
Q ss_pred EEEeChhhHHHHHHHHhc--cCCEEEEEeCCccC----HHHHhcCCceEEec-Ccc---HHHHhhcCeeecC
Q 001877 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDGVND----APALKKADIGIAMG-SGT---AVAKSASDMVLAD 727 (1001)
Q Consensus 666 ~~r~~p~~K~~~v~~l~~--~~~~v~~iGDg~ND----~~~l~~A~vgIam~-~~~---~~~~~~ad~v~~~ 727 (1001)
|.=|||..=.++++...- .|+.|+.+|-|..= +.||...|.-|.+- +-+ ......||+++..
T Consensus 136 ~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~~~~~~ADIvIsA 207 (282)
T PRK14166 136 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVA 207 (282)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 344666665666665542 48999999998542 44666666666543 222 2344668998754
No 209
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=55.88 E-value=86 Score=33.57 Aligned_cols=62 Identities=18% Similarity=0.230 Sum_probs=38.3
Q ss_pred EEEeChhhHHHHHHHHhc--cCCEEEEEeCCccC----HHHHhcCCceEEec-Ccc---HHHHhhcCeeecC
Q 001877 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDGVND----APALKKADIGIAMG-SGT---AVAKSASDMVLAD 727 (1001)
Q Consensus 666 ~~r~~p~~K~~~v~~l~~--~~~~v~~iGDg~ND----~~~l~~A~vgIam~-~~~---~~~~~~ad~v~~~ 727 (1001)
|.=|||..=.++++...- .|+.|+.+|.|..= +-||...+.-|.+- +-+ ......||+++..
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~~~~ADIvIsA 208 (278)
T PRK14172 137 FLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEVCKKADILVVA 208 (278)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 344677666666666543 48999999998542 44666666666553 222 2234568998754
No 210
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=54.58 E-value=77 Score=34.32 Aligned_cols=61 Identities=16% Similarity=0.187 Sum_probs=35.9
Q ss_pred EEeChhhHHHHHHHHhc--cCCEEEEEeCCcc----CHHHHhcCCceEEec--Cc--cHHHHhhcCeeecC
Q 001877 667 TRVEPSHKRMLVEALQN--QNEVVAMTGDGVN----DAPALKKADIGIAMG--SG--TAVAKSASDMVLAD 727 (1001)
Q Consensus 667 ~r~~p~~K~~~v~~l~~--~~~~v~~iGDg~N----D~~~l~~A~vgIam~--~~--~~~~~~~ad~v~~~ 727 (1001)
.=|||..=.++++...- .|+.|+.+|-+.. =+-||...+.-|.+- .. -......||+++..
T Consensus 138 ~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvIsA 208 (297)
T PRK14186 138 RSCTPAGVMRLLRSQQIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLASITREADILVAA 208 (297)
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 34667666666665543 3899999999743 133555555555442 21 22344668998864
No 211
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=54.50 E-value=11 Score=39.81 Aligned_cols=96 Identities=13% Similarity=0.077 Sum_probs=52.5
Q ss_pred cHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeChhh
Q 001877 594 REEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSH 673 (1001)
Q Consensus 594 ~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 673 (1001)
-++..++++.+++.|++. ++|+.+...+.......|..... . .+...-.+......-.|+-
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~~~-------------~-----~i~~~g~~~~~~gKP~~~~ 200 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGYYA-------------E-----LIKQLGGKVIYSGKPYPAI 200 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccHHH-------------H-----HHHHhCCcEecCCCCCHHH
Confidence 578999999999999997 77877665543332222221100 0 0000000000111112222
Q ss_pred HHHHHHHHhcc-CCEEEEEeCC-ccCHHHHhcCCceE
Q 001877 674 KRMLVEALQNQ-NEVVAMTGDG-VNDAPALKKADIGI 708 (1001)
Q Consensus 674 K~~~v~~l~~~-~~~v~~iGDg-~ND~~~l~~A~vgI 708 (1001)
=..+.+.+... .+.++||||+ .+|+.+-+.|++-.
T Consensus 201 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~ 237 (242)
T TIGR01459 201 FHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDT 237 (242)
T ss_pred HHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeE
Confidence 23344444322 3579999999 69999999988754
No 212
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=54.49 E-value=79 Score=33.99 Aligned_cols=62 Identities=16% Similarity=0.175 Sum_probs=35.9
Q ss_pred EEEeChhhHHHHHHHHhc--cCCEEEEEeCCccC----HHHHhcCCceEEec-Ccc---HHHHhhcCeeecC
Q 001877 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDGVND----APALKKADIGIAMG-SGT---AVAKSASDMVLAD 727 (1001)
Q Consensus 666 ~~r~~p~~K~~~v~~l~~--~~~~v~~iGDg~ND----~~~l~~A~vgIam~-~~~---~~~~~~ad~v~~~ 727 (1001)
|.=|||.-=.++++.++- .|+.|+.+|-+..= +.||...+--|.+- +.+ ......||+++.-
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~~~~~~ADIvI~A 208 (284)
T PRK14190 137 FLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLAELTKQADILIVA 208 (284)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHHHHHHhCCEEEEe
Confidence 444677666666666543 48899999987431 33555444444432 222 2345678888754
No 213
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=53.95 E-value=90 Score=33.80 Aligned_cols=46 Identities=17% Similarity=0.325 Sum_probs=31.6
Q ss_pred cCCCcHHHHHHHHHHHhCCcE---EEEEcCCCHHHH------HHHHHHhCCCCcc
Q 001877 590 LDPPREEVKNAMLSCMTAGIR---VIVVTGDNKSTA------ESICHKIGAFDHL 635 (1001)
Q Consensus 590 ~d~~~~~~~~~I~~l~~~gi~---v~~~TGd~~~~a------~~ia~~~gi~~~~ 635 (1001)
.++++++.++.++.+++.|++ .++.-||++.+. ...|+++|+....
T Consensus 11 A~~i~~~l~~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~ 65 (297)
T PRK14167 11 AAQIRDDLTDAIETLEDAGVTPGLATVLMSDDPASETYVSMKQRDCEEVGIEAID 65 (297)
T ss_pred HHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEE
Confidence 456778888888888887874 356678777654 3346778876543
No 214
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=53.86 E-value=98 Score=34.15 Aligned_cols=62 Identities=15% Similarity=0.135 Sum_probs=37.0
Q ss_pred EEEeChhhHHHHHHHHhc--cCCEEEEEeCCcc----CHHHHhcCCceEEec----CccHHHHhhcCeeecC
Q 001877 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDGVN----DAPALKKADIGIAMG----SGTAVAKSASDMVLAD 727 (1001)
Q Consensus 666 ~~r~~p~~K~~~v~~l~~--~~~~v~~iGDg~N----D~~~l~~A~vgIam~----~~~~~~~~~ad~v~~~ 727 (1001)
|.=|||..=.++++...- .|+.++.+|.+.. =+-||...|.-|.+- ..-......||+++..
T Consensus 193 ~~PCTp~avi~LL~~~~i~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T~nl~~~~~~ADIvIsA 264 (345)
T PLN02897 193 FVSCTPKGCVELLIRSGVEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDPEQITRKADIVIAA 264 (345)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCCCCHHHHHhhCCEEEEc
Confidence 444666655555555443 3899999999743 244666666555542 1223344668998754
No 215
>PLN03190 aminophospholipid translocase; Provisional
Probab=53.47 E-value=2.4e+02 Score=37.18 Aligned_cols=47 Identities=19% Similarity=0.180 Sum_probs=34.7
Q ss_pred HHHHHHHHHhcCCCcEEEEECCeEEEeeCCCCCCCcEEEecCCCccCCcEEEee
Q 001877 111 AEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIE 164 (1001)
Q Consensus 111 ~~~~~~~l~~~~~~~~~v~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~ 164 (1001)
.++.++++++++.+... |.+...+ +.-|....++..|..|-|.+.+.
T Consensus 152 ike~~Ed~~r~k~d~~~---N~~~~~v----~~~~~~~~i~~~~i~vGDiv~v~ 198 (1178)
T PLN03190 152 VKDAYEDWRRHRSDRIE---NNRLAWV----LVDDQFQEKKWKDIRVGEIIKIQ 198 (1178)
T ss_pred HHHHHHHHHHHHhHHhh---cCcEEEE----EECCeEEEEeHHHCCCCCEEEEC
Confidence 56789999988877542 3333333 23577888999999999999996
No 216
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=49.44 E-value=1.3e+02 Score=32.39 Aligned_cols=45 Identities=13% Similarity=0.302 Sum_probs=28.4
Q ss_pred cCCCcHHHHHHHHHHHhC-CcE---EEEEcCCCHHHH------HHHHHHhCCCCc
Q 001877 590 LDPPREEVKNAMLSCMTA-GIR---VIVVTGDNKSTA------ESICHKIGAFDH 634 (1001)
Q Consensus 590 ~d~~~~~~~~~I~~l~~~-gi~---v~~~TGd~~~~a------~~ia~~~gi~~~ 634 (1001)
.++++++.++.++.+++. |++ .++.-||++.+. ...|+++|+...
T Consensus 10 A~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~ 64 (293)
T PRK14185 10 SAQIKQEIAAEVAEIVAKGGKRPHLAAILVGHDGGSETYVANKVKACEECGFKSS 64 (293)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEE
Confidence 345677777778887766 555 355667776554 334667777643
No 217
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=49.21 E-value=77 Score=34.12 Aligned_cols=46 Identities=13% Similarity=0.340 Sum_probs=31.2
Q ss_pred ccCCCcHHHHHHHHHHHhCCcEE---EEEcCCCHHHHH------HHHHHhCCCCc
Q 001877 589 MLDPPREEVKNAMLSCMTAGIRV---IVVTGDNKSTAE------SICHKIGAFDH 634 (1001)
Q Consensus 589 ~~d~~~~~~~~~I~~l~~~gi~v---~~~TGd~~~~a~------~ia~~~gi~~~ 634 (1001)
+.++++++.++.++.+++.|++. +++-||++.+.. ..|+++|+...
T Consensus 11 ia~~i~~~~~~~v~~l~~~g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~~ 65 (286)
T PRK14175 11 IAKDYRQGLQDQVEALKEKGFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMISE 65 (286)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEE
Confidence 34567788888888888777653 555787776553 34677787654
No 218
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=47.46 E-value=1.4e+02 Score=32.09 Aligned_cols=62 Identities=13% Similarity=0.166 Sum_probs=36.2
Q ss_pred EEEeChhhHHHHHHHHhc--cCCEEEEEeCCccC----HHHHhcCCceEEec-Ccc---HHHHhhcCeeecC
Q 001877 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDGVND----APALKKADIGIAMG-SGT---AVAKSASDMVLAD 727 (1001)
Q Consensus 666 ~~r~~p~~K~~~v~~l~~--~~~~v~~iGDg~ND----~~~l~~A~vgIam~-~~~---~~~~~~ad~v~~~ 727 (1001)
|.-|||..=.++++..+- .|+.|+.+|-+..= +-||...+.-|.+- +.+ ....+.||+++..
T Consensus 138 ~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~~~~~~ADIvIsA 209 (284)
T PRK14177 138 YLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLPSIVRQADIIVGA 209 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEe
Confidence 445677655555555443 38899999987432 34565555555543 122 2345568888753
No 219
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=47.19 E-value=31 Score=36.13 Aligned_cols=48 Identities=15% Similarity=0.169 Sum_probs=36.5
Q ss_pred EEecccCCCcHHHHHHHHHHHhCCcEEEEEc---CCCHHHHHHHHHH-hCCC
Q 001877 585 GLVGMLDPPREEVKNAMLSCMTAGIRVIVVT---GDNKSTAESICHK-IGAF 632 (1001)
Q Consensus 585 G~i~~~d~~~~~~~~~I~~l~~~gi~v~~~T---Gd~~~~a~~ia~~-~gi~ 632 (1001)
|++.-.+.+-+++.++|+.++++|++++++| |++.........+ .|+.
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~ 58 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVD 58 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 3444456677799999999999999999998 6777666555555 6764
No 220
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=47.00 E-value=3.6e+02 Score=35.42 Aligned_cols=200 Identities=14% Similarity=0.151 Sum_probs=100.7
Q ss_pred HHHHHHHHHHhcCCCcEEEEECCeEEEeeCCCCCC-CcEEEecCCCccCCcEEEeeecCCc------eEEecccccCCCc
Q 001877 110 NAEKALEELRAYQADIATVLRNGCFSILPAAELVP-GDIVEVNVGCKIPADMRMIEMLSNQ------LRVDQAILTGESC 182 (1001)
Q Consensus 110 ~~~~~~~~l~~~~~~~~~v~R~g~~~~i~~~~Lv~-GDiI~l~~G~~iPaD~~ll~~~~g~------~~Vdes~LtGEs~ 182 (1001)
..++.++++++++.++.. +.+...|- +. |....+...|..|-|.+.++ .|+ ..+..|.-+|...
T Consensus 65 ~~~~~~ed~~r~~~d~~~---n~~~~~v~----~~~~~~~~i~~~~l~~GDiv~l~--~g~~iPaD~~ll~ss~~~g~~~ 135 (1057)
T TIGR01652 65 AIKEAIEDIRRRRRDKEV---NNRLTEVL----EGHGQFVEIPWKDLRVGDIVKVK--KDERIPADLLLLSSSEPDGVCY 135 (1057)
T ss_pred HHHHHHHHHHHHHhHHHH---hCcEEEEE----CCCCcEEEeeeecccCCCEEEEc--CCCcccceEEEEeccCCCceEE
Confidence 467889999988877532 23333322 32 67889999999999999996 332 3344444445432
Q ss_pred ccccchhhhccc--cccc-----------------------CCCCceEEecceeecc-e----------EEE-EEEE---
Q 001877 183 SVEKELDSIIAT--NAVY-----------------------QDKTNILFSGTVVVAG-R----------ARA-VVVG--- 222 (1001)
Q Consensus 183 pv~k~~~~~~~~--~~~~-----------------------~~~~n~l~~Gt~v~~g-~----------~~~-~V~~--- 222 (1001)
--.....-+..+ ..+. ++..-..|.|+...++ . ..| .|..
T Consensus 136 v~~s~l~GEs~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~ 215 (1057)
T TIGR01652 136 VETANLDGETNLKLRQALEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDW 215 (1057)
T ss_pred EEeeccCCeecceEeecchhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCe
Confidence 212111111110 1100 1111135778777655 1 011 1222
Q ss_pred -ecccccchhHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCc----cchH-------HHHH
Q 001877 223 -VGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHG----GFLR-------GAIH 290 (1001)
Q Consensus 223 -tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-------~~~~ 290 (1001)
.|--.+.|.-.+........+.+ ...+++-...++.+++++.+++.++........... .|.. +...
T Consensus 216 ~~gvVvyTG~~Tk~~~n~~~~~~k-~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~ 294 (1057)
T TIGR01652 216 VIGVVVYTGHDTKLMRNATQAPSK-RSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAA 294 (1057)
T ss_pred EEEEEEEEchhhhhhhcCCCCccc-ccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchh
Confidence 33444557666665544333222 345677666666665555554444433322211111 1110 0012
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHhh
Q 001877 291 YFKIAVALAVAAIPEGLPAVVTTCLALGT 319 (1001)
Q Consensus 291 ~~~~~i~ll~~~iP~~L~~~~~~~~~~~~ 319 (1001)
.+...+..++...+..+|..+.+.+.+..
T Consensus 295 ~~~~~~~~~~~L~~~~IPisL~v~l~l~~ 323 (1057)
T TIGR01652 295 NGFFSFLTFLILFSSLIPISLYVSLELVK 323 (1057)
T ss_pred HHHHHHHHHHHHHhhhcceeeeehHHHHH
Confidence 23334556667778888888877776663
No 221
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=46.99 E-value=1.2e+02 Score=32.57 Aligned_cols=46 Identities=17% Similarity=0.335 Sum_probs=29.3
Q ss_pred ccCCCcHHHHHHHHHHHhCCcEE---EEEcCCCHHHH------HHHHHHhCCCCc
Q 001877 589 MLDPPREEVKNAMLSCMTAGIRV---IVVTGDNKSTA------ESICHKIGAFDH 634 (1001)
Q Consensus 589 ~~d~~~~~~~~~I~~l~~~gi~v---~~~TGd~~~~a------~~ia~~~gi~~~ 634 (1001)
+.++++++.++.++.+++.|++. ++.-||++... ...|+++|+...
T Consensus 11 va~~i~~~l~~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~ 65 (284)
T PRK14193 11 TADEIKADLAERVAALKEKGITPGLGTVLVGDDPGSQAYVRGKHRDCAEVGITSI 65 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEE
Confidence 34556777778888887777653 34467766544 334677777643
No 222
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=46.73 E-value=1e+02 Score=33.10 Aligned_cols=61 Identities=10% Similarity=0.088 Sum_probs=36.0
Q ss_pred EEEeChhhHHHHHHHHhc--cCCEEEEEeCCcc----CHHHHhcCCceEEec--C--ccHHHHhhcCeeec
Q 001877 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDGVN----DAPALKKADIGIAMG--S--GTAVAKSASDMVLA 726 (1001)
Q Consensus 666 ~~r~~p~~K~~~v~~l~~--~~~~v~~iGDg~N----D~~~l~~A~vgIam~--~--~~~~~~~~ad~v~~ 726 (1001)
|.=|||..=.++++..+- .|+.|+.+|-|.. =+.||...|.-|.+- . .-......||+++.
T Consensus 143 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvv~ 213 (287)
T PRK14176 143 LVPCTPHGVIRALEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLKKYTLDADILVV 213 (287)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHHHHHhhCCEEEE
Confidence 334677666666666543 4889999999852 133555555555542 1 12233456898874
No 223
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=46.27 E-value=1.3e+02 Score=33.32 Aligned_cols=62 Identities=13% Similarity=0.212 Sum_probs=34.7
Q ss_pred EEEeChhhHHHHHHHHhc--cCCEEEEEeCCcc----CHHHHhcCCceEEec----CccHHHHhhcCeeecC
Q 001877 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDGVN----DAPALKKADIGIAMG----SGTAVAKSASDMVLAD 727 (1001)
Q Consensus 666 ~~r~~p~~K~~~v~~l~~--~~~~v~~iGDg~N----D~~~l~~A~vgIam~----~~~~~~~~~ad~v~~~ 727 (1001)
|.=|||..=.++++...- .|+.|+.+|.+.. =+-||...|--|.+- ..-......||+++..
T Consensus 210 f~PCTp~avielL~~y~i~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T~nl~~~~r~ADIVIsA 281 (364)
T PLN02616 210 FVPCTPKGCIELLHRYNVEIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITREADIIISA 281 (364)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 344666655555554432 3889999998743 134565555444442 1223344568888754
No 224
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=45.73 E-value=5.5e+02 Score=33.66 Aligned_cols=228 Identities=13% Similarity=0.163 Sum_probs=104.1
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEECCeEEEeeCCCCCCCcEEEecCCCccCCcEEEeee-cCCceEEecc
Q 001877 97 LAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEM-LSNQLRVDQA 175 (1001)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~~ll~~-~~g~~~Vdes 175 (1001)
+++.........+..+++.+++++ ... ......| ++-|....+...|.+|-|.++++. .+..+-+|=-
T Consensus 200 ~~i~~~~~~~~~~~~~k~~~~L~~-~~~------~~~~v~V----~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ 268 (1054)
T TIGR01657 200 VFMSSTSISLSVYQIRKQMQRLRD-MVH------KPQSVIV----IRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSV 268 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hhc------CCeeEEE----EECCEEEEEEcccCCCCCEEEEecCCCCEecceEE
Confidence 333333334444455566555543 221 2223333 234889999999999999999961 1334455655
Q ss_pred cccCCCcccccchhhhccc-----ccccCC---CCceE-----EecceeecceEEEEEEEe-cccccchhH--------H
Q 001877 176 ILTGESCSVEKELDSIIAT-----NAVYQD---KTNIL-----FSGTVVVAGRARAVVVGV-GANTAMGSI--------R 233 (1001)
Q Consensus 176 ~LtGEs~pv~k~~~~~~~~-----~~~~~~---~~n~l-----~~Gt~v~~g~~~~~V~~t-G~~T~~g~i--------~ 233 (1001)
.+.|+. -+.-. .++++ +.+... ..+.+ -++..+..|.....+... |..+..+.. .
T Consensus 269 ll~g~~-~VdES--~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~ 345 (1054)
T TIGR01657 269 LLSGSC-IVNES--MLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSK 345 (1054)
T ss_pred EEeCcE-EEecc--cccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccc
Confidence 666632 22211 11111 111100 01111 234456677655433221 111122211 1
Q ss_pred HHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHH
Q 001877 234 DSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTT 313 (1001)
Q Consensus 234 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~~~~~~ 313 (1001)
..+.+.-....+....+++-...+..++++++++.+++..... ... -..+...+...+..+=...|-++++
T Consensus 346 G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~~--------~~~-~~~~~~~~l~~l~iiv~~vP~~LP~ 416 (1054)
T TIGR01657 346 GQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIEL--------IKD-GRPLGKIILRSLDIITIVVPPALPA 416 (1054)
T ss_pred hHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHc-CCcHHHHHHHHHHHHHhhcCchHHH
Confidence 1111111222333344455555555544444444433321110 010 0112223333445566667888888
Q ss_pred HHHHhhHhhhhccccccccccccccCCeeEEEeCCCCccccCceEE
Q 001877 314 CLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSV 359 (1001)
Q Consensus 314 ~~~~~~~~l~~~~i~~k~~~~~e~lg~v~~i~~DKTGTLT~n~m~v 359 (1001)
++..+.....+ .|.+-+.+|.+-...-|-|..++
T Consensus 417 ~~ti~l~~~~~------------rL~k~~il~~~~~~ie~lG~v~v 450 (1054)
T TIGR01657 417 ELSIGINNSLA------------RLKKKGIFCTSPFRINFAGKIDV 450 (1054)
T ss_pred HHHHHHHHHHH------------HHHHCCEEEcCcccceecceeeE
Confidence 88888655433 34445567766665555555444
No 225
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=45.29 E-value=25 Score=32.18 Aligned_cols=41 Identities=15% Similarity=0.247 Sum_probs=31.5
Q ss_pred CCcHHHHHHHHHHHhCCcE-EEEEcCCCHHHHHHHHHHhCCC
Q 001877 592 PPREEVKNAMLSCMTAGIR-VIVVTGDNKSTAESICHKIGAF 632 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~-v~~~TGd~~~~a~~ia~~~gi~ 632 (1001)
-..+.+.+.++++.+.|++ +|+.+|...+.+...|++.|+.
T Consensus 63 ~~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi~ 104 (116)
T PF13380_consen 63 VPPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGIR 104 (116)
T ss_dssp S-HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-E
T ss_pred cCHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCCE
Confidence 3577899999999999996 9999999999999999998875
No 226
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=44.46 E-value=1.6e+02 Score=31.59 Aligned_cols=62 Identities=10% Similarity=0.119 Sum_probs=35.6
Q ss_pred EEEeChhhHHHHHHHHhc--cCCEEEEEeCCccC----HHHHhcCCceEEec--Ccc--HHHHhhcCeeecC
Q 001877 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDGVND----APALKKADIGIAMG--SGT--AVAKSASDMVLAD 727 (1001)
Q Consensus 666 ~~r~~p~~K~~~v~~l~~--~~~~v~~iGDg~ND----~~~l~~A~vgIam~--~~~--~~~~~~ad~v~~~ 727 (1001)
|.=|||..=.++++...- .|+.|+.+|-|..= +-||...+.-|.+- ... ...-+.||+++..
T Consensus 137 ~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~~~~k~ADIvIsA 208 (282)
T PRK14180 137 LESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSHTTKADILIVA 208 (282)
T ss_pred cCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHHHHhhhcCEEEEc
Confidence 334677666666666543 38899999987431 33555555444442 112 2234568888753
No 227
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=44.34 E-value=1.4e+02 Score=32.24 Aligned_cols=111 Identities=14% Similarity=0.073 Sum_probs=57.3
Q ss_pred CCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHH
Q 001877 579 KDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTV 658 (1001)
Q Consensus 579 ~~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (1001)
-+-.++|. . .+---+++.++++.|++.|+ ..++|..+..... .-+..... .+.-+.. +..
T Consensus 132 ~~~Vvv~~-d-~~~~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~----~~~~~~~~--------~g~~~~~-----i~~ 191 (279)
T TIGR01452 132 VGAVVVGY-D-EHFSYAKLREACAHLREPGC-LFVATNRDPWHPL----SDGSRTPG--------TGSLVAA-----IET 191 (279)
T ss_pred CCEEEEec-C-CCCCHHHHHHHHHHHhcCCC-EEEEeCCCCCCCC----cCCCcccC--------hHHHHHH-----HHH
Confidence 34556664 1 12247899999999999998 5677765532211 00110000 0000000 000
Q ss_pred hhc-cceEEEEeChhhHHHHHHHHhccCCEEEEEeCC-ccCHHHHhcCCceEE
Q 001877 659 ALQ-HMALFTRVEPSHKRMLVEALQNQNEVVAMTGDG-VNDAPALKKADIGIA 709 (1001)
Q Consensus 659 ~~~-~~~v~~r~~p~~K~~~v~~l~~~~~~v~~iGDg-~ND~~~l~~A~vgIa 709 (1001)
... +......-+|+-=..+++.+.-..+.++||||. ..|+.+-+.|++--.
T Consensus 192 ~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si 244 (279)
T TIGR01452 192 ASGRQPLVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTV 244 (279)
T ss_pred HhCCceeccCCCCHHHHHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEE
Confidence 000 000111222333334455554456789999999 599999999998743
No 228
>PRK11507 ribosome-associated protein; Provisional
Probab=43.86 E-value=29 Score=28.31 Aligned_cols=26 Identities=19% Similarity=0.259 Sum_probs=23.0
Q ss_pred EEEECCeEEEeeCCCCCCCcEEEecC
Q 001877 127 TVLRNGCFSILPAAELVPGDIVEVNV 152 (1001)
Q Consensus 127 ~v~R~g~~~~i~~~~Lv~GDiI~l~~ 152 (1001)
.|..||+...-.-..|.|||+|.+..
T Consensus 38 ~V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 38 QVKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred ceEECCEEecccCCCCCCCCEEEECC
Confidence 57789999999999999999999854
No 229
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=42.71 E-value=1.7e+02 Score=31.49 Aligned_cols=60 Identities=17% Similarity=0.169 Sum_probs=34.3
Q ss_pred EeChhhHHHHHHHHhc--cCCEEEEEeCCcc----CHHHHhcCCceEEec--C--ccHHHHhhcCeeecC
Q 001877 668 RVEPSHKRMLVEALQN--QNEVVAMTGDGVN----DAPALKKADIGIAMG--S--GTAVAKSASDMVLAD 727 (1001)
Q Consensus 668 r~~p~~K~~~v~~l~~--~~~~v~~iGDg~N----D~~~l~~A~vgIam~--~--~~~~~~~~ad~v~~~ 727 (1001)
=|||..=.++++..+- .|+.|+.+|.|.. =+-||...+.-|.+. . .-....+.||+++..
T Consensus 138 PcTp~avi~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~~~~~~ADIvV~A 207 (281)
T PRK14183 138 PCTPLGVMELLEEYEIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKDLKAHTKKADIVIVG 207 (281)
T ss_pred CCcHHHHHHHHHHcCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHHHHHhhCCEEEEe
Confidence 3566555555555432 3889999999833 133555555544442 1 122334668998754
No 230
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=42.56 E-value=1.6e+02 Score=31.79 Aligned_cols=62 Identities=11% Similarity=0.030 Sum_probs=37.3
Q ss_pred EEEeChhhHHHHHHHHhc--cCCEEEEEeCCccC----HHHHhcCCceEEec--Cc--cHHHHhhcCeeecC
Q 001877 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDGVND----APALKKADIGIAMG--SG--TAVAKSASDMVLAD 727 (1001)
Q Consensus 666 ~~r~~p~~K~~~v~~l~~--~~~~v~~iGDg~ND----~~~l~~A~vgIam~--~~--~~~~~~~ad~v~~~ 727 (1001)
|.=|||..=.++++...- .|+.++.+|.|..= +.||...+.-|.+- .. -......||+++..
T Consensus 138 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvi~a 209 (285)
T PRK10792 138 LRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLRHHVRNADLLVVA 209 (285)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHHHHHhhCCEEEEc
Confidence 344677666666666543 38999999998531 33565555555542 21 22344668998864
No 231
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=41.72 E-value=2.1e+02 Score=31.01 Aligned_cols=62 Identities=15% Similarity=0.104 Sum_probs=35.8
Q ss_pred EEEeChhhHHHHHHHHhc--cCCEEEEEeCCcc----CHHHHhcCCceEEec--Cc--cHHHHhhcCeeecC
Q 001877 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDGVN----DAPALKKADIGIAMG--SG--TAVAKSASDMVLAD 727 (1001)
Q Consensus 666 ~~r~~p~~K~~~v~~l~~--~~~~v~~iGDg~N----D~~~l~~A~vgIam~--~~--~~~~~~~ad~v~~~ 727 (1001)
|.=|||..=.++++...- .|+.++.+|-+.. =+-||...|.-|.+- .. -......||+++..
T Consensus 139 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~~~~~~ADIvVsA 210 (294)
T PRK14187 139 LIPCTPKGCLYLIKTITRNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLADYCSKADILVAA 210 (294)
T ss_pred ccCcCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 445677666666665542 3889999998743 133555555555442 11 22334568888753
No 232
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=40.80 E-value=1.6e+02 Score=31.74 Aligned_cols=62 Identities=15% Similarity=0.180 Sum_probs=35.6
Q ss_pred EEEeChhhHHHHHHHHhc--cCCEEEEEeCCccC----HHHHhcCCceEEec--Ccc--HHHHhhcCeeecC
Q 001877 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDGVND----APALKKADIGIAMG--SGT--AVAKSASDMVLAD 727 (1001)
Q Consensus 666 ~~r~~p~~K~~~v~~l~~--~~~~v~~iGDg~ND----~~~l~~A~vgIam~--~~~--~~~~~~ad~v~~~ 727 (1001)
|.=|||..=.++++..+- .|+.|+.+|-|..= +-||...|.-|.+- ... ......||+++..
T Consensus 138 ~~PcTp~av~~lL~~y~i~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L~~~~~~ADIvV~A 209 (288)
T PRK14171 138 FIPCTALGCLAVIKKYEPNLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNLSSITSKADIVVAA 209 (288)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 444666665555555432 38899999987431 34565556555543 222 2234568888764
No 233
>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]
Probab=39.22 E-value=2.1e+02 Score=30.59 Aligned_cols=60 Identities=18% Similarity=0.177 Sum_probs=38.7
Q ss_pred EeChhhHHHHHHHHhc--cCCEEEEEeCCcc----CHHHHhcCCceEEec----CccHHHHhhcCeeecC
Q 001877 668 RVEPSHKRMLVEALQN--QNEVVAMTGDGVN----DAPALKKADIGIAMG----SGTAVAKSASDMVLAD 727 (1001)
Q Consensus 668 r~~p~~K~~~v~~l~~--~~~~v~~iGDg~N----D~~~l~~A~vgIam~----~~~~~~~~~ad~v~~~ 727 (1001)
=|||..-..+++.+.- +|..+..+|-|.- =+.||..++..|.+- .......+.||+++..
T Consensus 137 PCTp~gi~~ll~~~~i~l~Gk~~vVVGrS~iVGkPla~lL~~~naTVtvcHs~T~~l~~~~k~ADIvv~A 206 (283)
T COG0190 137 PCTPAGIMTLLEEYGIDLRGKNVVVVGRSNIVGKPLALLLLNANATVTVCHSRTKDLASITKNADIVVVA 206 (283)
T ss_pred CCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHhCCCEEEEEcCCCCCHHHHhhhCCEEEEe
Confidence 4777776677776655 5889999998732 244667777777763 2233444567887754
No 234
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=38.94 E-value=16 Score=29.41 Aligned_cols=24 Identities=38% Similarity=0.537 Sum_probs=13.8
Q ss_pred EEEECCeEEEeeCCCCCCCcEEEe
Q 001877 127 TVLRNGCFSILPAAELVPGDIVEV 150 (1001)
Q Consensus 127 ~v~R~g~~~~i~~~~Lv~GDiI~l 150 (1001)
.|..||+...-....|.|||+|.+
T Consensus 34 ~V~VNGe~e~rrg~Kl~~GD~V~~ 57 (65)
T PF13275_consen 34 EVKVNGEVETRRGKKLRPGDVVEI 57 (65)
T ss_dssp HHEETTB----SS----SSEEEEE
T ss_pred ceEECCEEccccCCcCCCCCEEEE
Confidence 366799999999999999999998
No 235
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=38.15 E-value=14 Score=31.26 Aligned_cols=22 Identities=32% Similarity=0.454 Sum_probs=16.2
Q ss_pred eeCCCCCCCcEEEe-cCCCccCC
Q 001877 137 LPAAELVPGDIVEV-NVGCKIPA 158 (1001)
Q Consensus 137 i~~~~Lv~GDiI~l-~~G~~iPa 158 (1001)
+...+|.+||.|.+ +.||.||-
T Consensus 45 i~~~~i~~Gd~V~V~raGdVIP~ 67 (82)
T PF03120_consen 45 IKELDIRIGDTVLVTRAGDVIPK 67 (82)
T ss_dssp HHHTT-BBT-EEEEEEETTTEEE
T ss_pred HHHcCCCCCCEEEEEECCCccce
Confidence 44568999998887 67999996
No 236
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=37.81 E-value=1.6e+02 Score=31.69 Aligned_cols=62 Identities=15% Similarity=0.306 Sum_probs=36.7
Q ss_pred EEEeChhhHHHHHHHHhc--cCCEEEEEeCCcc-CHH---HHhcCCceEEe--cCcc--HHHHhhcCeeecC
Q 001877 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDGVN-DAP---ALKKADIGIAM--GSGT--AVAKSASDMVLAD 727 (1001)
Q Consensus 666 ~~r~~p~~K~~~v~~l~~--~~~~v~~iGDg~N-D~~---~l~~A~vgIam--~~~~--~~~~~~ad~v~~~ 727 (1001)
|.=|||..=.++++...- .|..|..+|-|.. =-| +|...+-.|.. .+.. ......||+++..
T Consensus 131 ~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~~~~ADIvI~A 202 (279)
T PRK14178 131 FAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAELRQADILVSA 202 (279)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHHHhhCCEEEEC
Confidence 344677666666665543 3899999999833 334 56555554443 3222 2334568998865
No 237
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=36.95 E-value=1.8e+02 Score=28.83 Aligned_cols=108 Identities=19% Similarity=0.190 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHhCCcEEEEEcCCCHHH-HHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhccceEEEEeChhh
Q 001877 595 EEVKNAMLSCMTAGIRVIVVTGDNKST-AESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSH 673 (1001)
Q Consensus 595 ~~~~~~I~~l~~~gi~v~~~TGd~~~~-a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 673 (1001)
-|..++++.+++.|-++.+++=++... ...+.+-+|+.- ..+.-.++++
T Consensus 64 ~Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~i------------------------------~~~~~~~~~e 113 (176)
T PF06506_consen 64 FDILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVDI------------------------------KIYPYDSEEE 113 (176)
T ss_dssp HHHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-EE------------------------------EEEEESSHHH
T ss_pred hHHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCce------------------------------EEEEECCHHH
Confidence 356677777777777777776666554 666667776632 2444567888
Q ss_pred HHHHHHHHhccCCEEEEEeCCccCHHHHhcCCceEEecCccHHHHhhcCeeecCCCchHHHHHHHHhHHHHHHHHH
Q 001877 674 KRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQ 749 (1001)
Q Consensus 674 K~~~v~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~ 749 (1001)
-...++.++..| .-+.+|++.- +.+.+..|+ ..++...+..++..++.+++.++...++
T Consensus 114 ~~~~i~~~~~~G-~~viVGg~~~-~~~A~~~gl---------------~~v~i~sg~esi~~Al~eA~~i~~~~~~ 172 (176)
T PF06506_consen 114 IEAAIKQAKAEG-VDVIVGGGVV-CRLARKLGL---------------PGVLIESGEESIRRALEEALRIARARRR 172 (176)
T ss_dssp HHHHHHHHHHTT---EEEESHHH-HHHHHHTTS---------------EEEESS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC-CcEEECCHHH-HHHHHHcCC---------------cEEEEEecHHHHHHHHHHHHHHHHHHHH
Confidence 888899998888 4455587632 333344333 3455666788899999999998877654
No 238
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=36.44 E-value=2.3e+02 Score=36.54 Aligned_cols=20 Identities=10% Similarity=0.235 Sum_probs=12.4
Q ss_pred CcEEEecCCCccCCcEEEee
Q 001877 145 GDIVEVNVGCKIPADMRMIE 164 (1001)
Q Consensus 145 GDiI~l~~G~~iPaD~~ll~ 164 (1001)
|-...+...|.+|-|.++++
T Consensus 174 G~~~~I~~~~Lv~GDiV~l~ 193 (941)
T TIGR01517 174 GQEQQISIHDIVVGDIVSLS 193 (941)
T ss_pred CEEEEEeHHHCCCCCEEEEC
Confidence 55556666666666666664
No 239
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=36.32 E-value=2.6e+02 Score=30.31 Aligned_cols=62 Identities=15% Similarity=0.153 Sum_probs=33.8
Q ss_pred EEEeChhhHHHHHHHHhc--cCCEEEEEeCCccC----HHHHhc------CCceEEecC--ccHHHHhhcCeeecC
Q 001877 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDGVND----APALKK------ADIGIAMGS--GTAVAKSASDMVLAD 727 (1001)
Q Consensus 666 ~~r~~p~~K~~~v~~l~~--~~~~v~~iGDg~ND----~~~l~~------A~vgIam~~--~~~~~~~~ad~v~~~ 727 (1001)
|.=|||.-=.++++...- .|+.|+.+|.+..= +-||.. |-|-++=.. .-....+.||+++..
T Consensus 140 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~hs~T~~l~~~~~~ADIvVsA 215 (297)
T PRK14168 140 FLPCTPAGIQEMLVRSGVETSGAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIVHTRSKNLARHCQRADILIVA 215 (297)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEecCCCcCHHHHHhhCCEEEEe
Confidence 334566555555555432 38899999997431 334443 334444222 223344678988853
No 240
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=35.95 E-value=47 Score=32.24 Aligned_cols=42 Identities=14% Similarity=0.069 Sum_probs=37.9
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCC
Q 001877 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFD 633 (1001)
Q Consensus 591 d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~ 633 (1001)
=.+||++.+.+++|++. ++++++|.-....|..+.+.++...
T Consensus 57 v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~ 98 (156)
T TIGR02250 57 TKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDG 98 (156)
T ss_pred EEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCC
Confidence 35799999999999955 9999999999999999999998764
No 241
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=35.67 E-value=2.2e+02 Score=30.39 Aligned_cols=43 Identities=23% Similarity=0.435 Sum_probs=25.7
Q ss_pred hhhHHHHHHHHhccCCEEEEEeCCccCHH---HHhcCCc-eEEecCc
Q 001877 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAP---ALKKADI-GIAMGSG 713 (1001)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~iGDg~ND~~---~l~~A~v-gIam~~~ 713 (1001)
+++-.+.++.+++.-..-.++|=|.|+.. .+..++. |+-+|++
T Consensus 187 ~~~~~~~i~~ir~~t~~Pi~vGFGI~~~e~~~~~~~~GADGvVVGSa 233 (263)
T CHL00200 187 DKKLKKLIETIKKMTNKPIILGFGISTSEQIKQIKGWNINGIVIGSA 233 (263)
T ss_pred cHHHHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHhcCCCEEEECHH
Confidence 34456777777766555566799999544 4444422 5666543
No 242
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=35.12 E-value=73 Score=29.12 Aligned_cols=38 Identities=18% Similarity=0.292 Sum_probs=29.6
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCC
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGA 631 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi 631 (1001)
--.+++.++++.+++.|++++.+|++.+ ....+.+.|.
T Consensus 54 G~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~ 91 (119)
T cd05017 54 GNTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGV 91 (119)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCC
Confidence 3567899999999999999999998874 3445665554
No 243
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=35.11 E-value=1e+02 Score=26.20 Aligned_cols=48 Identities=17% Similarity=0.086 Sum_probs=39.6
Q ss_pred EecccCCCcHHHHHHHHHHHhCCcEEEE-EcCCCHHHHHHHHHHhCCCC
Q 001877 586 LVGMLDPPREEVKNAMLSCMTAGIRVIV-VTGDNKSTAESICHKIGAFD 633 (1001)
Q Consensus 586 ~i~~~d~~~~~~~~~I~~l~~~gi~v~~-~TGd~~~~a~~ia~~~gi~~ 633 (1001)
++.+.+...+.+.+..+.|+++|+++.+ ..+++.......|.+.|+..
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~~ 54 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIPY 54 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCCE
Confidence 3445677888999999999999999988 67788888888899999764
No 244
>COG1916 Uncharacterized homolog of PrgY (pheromone shutdown protein) [Function unknown]
Probab=34.36 E-value=3e+02 Score=30.45 Aligned_cols=41 Identities=22% Similarity=0.250 Sum_probs=35.0
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCC
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAF 632 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 632 (1001)
++-.|.++||+..++.|..|.++--|-.-|-+..-.++++.
T Consensus 96 ~PGsEmk~AIe~A~e~ga~V~lIDRdI~vTl~R~~~~~~~~ 136 (388)
T COG1916 96 KPGSEMKAAIEAARELGAPVALIDRDIGVTLRRAWAKMPFW 136 (388)
T ss_pred CChHHHHHHHHHHHHcCCCEEEecccHHHHHHHHHHhCCHH
Confidence 57789999999999999999999888888887777666543
No 245
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=34.35 E-value=1e+02 Score=33.22 Aligned_cols=61 Identities=13% Similarity=0.086 Sum_probs=34.1
Q ss_pred EEeChhhHHHHHHHHhc--cCCEEEEEeCCcc----CHHHHhcCCceEEe--cCccH--HHHhhcCeeecC
Q 001877 667 TRVEPSHKRMLVEALQN--QNEVVAMTGDGVN----DAPALKKADIGIAM--GSGTA--VAKSASDMVLAD 727 (1001)
Q Consensus 667 ~r~~p~~K~~~v~~l~~--~~~~v~~iGDg~N----D~~~l~~A~vgIam--~~~~~--~~~~~ad~v~~~ 727 (1001)
.=|||..=.++++..+- .|+.|+.+|.|.. =+.||...+.-|.+ ....+ ...+.||+++..
T Consensus 137 ~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l~~~~~~ADIvV~A 207 (285)
T PRK14191 137 VPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDLSFYTQNADIVCVG 207 (285)
T ss_pred CCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCEEEEe
Confidence 34677666666665543 3899999999832 13355444444443 22222 234567777653
No 246
>PRK05585 yajC preprotein translocase subunit YajC; Validated
Probab=34.30 E-value=1e+02 Score=27.73 Aligned_cols=13 Identities=46% Similarity=0.537 Sum_probs=5.9
Q ss_pred CCCCCcEEEecCC
Q 001877 141 ELVPGDIVEVNVG 153 (1001)
Q Consensus 141 ~Lv~GDiI~l~~G 153 (1001)
+|+|||-|....|
T Consensus 52 ~Lk~Gd~VvT~gG 64 (106)
T PRK05585 52 SLAKGDEVVTNGG 64 (106)
T ss_pred hcCCCCEEEECCC
Confidence 4444554444443
No 247
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=33.45 E-value=98 Score=26.47 Aligned_cols=13 Identities=38% Similarity=0.314 Sum_probs=6.6
Q ss_pred CCCCCcEEEecCC
Q 001877 141 ELVPGDIVEVNVG 153 (1001)
Q Consensus 141 ~Lv~GDiI~l~~G 153 (1001)
+|+|||-|....|
T Consensus 37 ~L~~Gd~VvT~gG 49 (84)
T TIGR00739 37 SLKKGDKVLTIGG 49 (84)
T ss_pred hCCCCCEEEECCC
Confidence 4555555554444
No 248
>PF12368 DUF3650: Protein of unknown function (DUF3650) ; InterPro: IPR022111 This domain family is found in bacteria, and is approximately 30 amino acids in length. The family is found in association with PF00581 from PFAM. There is a single completely conserved residue N that may be functionally important.
Probab=32.60 E-value=37 Score=22.16 Aligned_cols=15 Identities=27% Similarity=0.543 Sum_probs=12.8
Q ss_pred CCCCCHHHHHHHHhh
Q 001877 21 TKGLTDSQVARHVRI 35 (1001)
Q Consensus 21 ~~GLs~~~~~~r~~~ 35 (1001)
+.|||.+|+++|++.
T Consensus 13 eh~ls~ee~~~RL~~ 27 (28)
T PF12368_consen 13 EHGLSEEEVAERLAA 27 (28)
T ss_pred hcCCCHHHHHHHHHc
Confidence 469999999999875
No 249
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=32.08 E-value=3.1e+02 Score=29.84 Aligned_cols=61 Identities=16% Similarity=0.122 Sum_probs=35.1
Q ss_pred EEeChhhHHHHHHHHhc--cCCEEEEEeCCccC----HHHHhcCCceEEec----CccHHHHhhcCeeecC
Q 001877 667 TRVEPSHKRMLVEALQN--QNEVVAMTGDGVND----APALKKADIGIAMG----SGTAVAKSASDMVLAD 727 (1001)
Q Consensus 667 ~r~~p~~K~~~v~~l~~--~~~~v~~iGDg~ND----~~~l~~A~vgIam~----~~~~~~~~~ad~v~~~ 727 (1001)
.=|||..=.++++..+- .|+.++.+|-+..= +.||...|.-|.+- ..-......||+++..
T Consensus 147 ~PcTp~avi~lL~~~~i~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~nl~~~~~~ADIvv~A 217 (299)
T PLN02516 147 LPCTPKGCLELLSRSGIPIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPDPESIVREADIVIAA 217 (299)
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 34666655555554432 38999999998442 34565555555442 1123344568998864
No 250
>PRK10747 putative protoheme IX biogenesis protein; Provisional
Probab=31.31 E-value=80 Score=36.11 Aligned_cols=45 Identities=13% Similarity=0.183 Sum_probs=27.1
Q ss_pred cccccCchhHHHHHHHHHHHHHHHHHHHHHHhhc-ccchhhhhhhc
Q 001877 945 SVTPLSWADWTAVFYLSFPVIIIDEVLKFFSRKS-SGMRFKFWFRR 989 (1001)
Q Consensus 945 ~~~~l~~~~w~~~~~~~~~~l~~~e~~K~~~r~~-~~~~~~~~~~~ 989 (1001)
+-..+-.+.|..+++++++++++-.+++++.+.+ .|...++|+.+
T Consensus 33 ~~~~ie~sl~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 78 (398)
T PRK10747 33 DNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGARTRGWFVG 78 (398)
T ss_pred CCEEEEehHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHH
Confidence 3334445567666666666555555666666544 36778888666
No 251
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=30.52 E-value=55 Score=28.76 Aligned_cols=28 Identities=36% Similarity=0.496 Sum_probs=23.1
Q ss_pred EEEECCeEEEeeCCCCCCCcEEEecCCCc
Q 001877 127 TVLRNGCFSILPAAELVPGDIVEVNVGCK 155 (1001)
Q Consensus 127 ~v~R~g~~~~i~~~~Lv~GDiI~l~~G~~ 155 (1001)
+|.-||+.. -++.++++||+|.|.-|..
T Consensus 35 rV~vNG~~a-KpS~~VK~GD~l~i~~~~~ 62 (100)
T COG1188 35 RVKVNGQRA-KPSKEVKVGDILTIRFGNK 62 (100)
T ss_pred eEEECCEEc-ccccccCCCCEEEEEeCCc
Confidence 566678766 7899999999999998864
No 252
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=30.27 E-value=6.2e+02 Score=26.58 Aligned_cols=50 Identities=12% Similarity=0.118 Sum_probs=39.7
Q ss_pred CCcEEEEEecccCCCcHHHHHHHHHHHhC---CcEEEEEcCCCHHHHHHHHHH
Q 001877 579 KDLTFIGLVGMLDPPREEVKNAMLSCMTA---GIRVIVVTGDNKSTAESICHK 628 (1001)
Q Consensus 579 ~~l~~lG~i~~~d~~~~~~~~~I~~l~~~---gi~v~~~TGd~~~~a~~ia~~ 628 (1001)
.|++=+=+++=.+-+.|+..++++.+++. |..++-.+-|++..|++++.-
T Consensus 91 ~~~iKlEVi~d~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~~ 143 (248)
T cd04728 91 TDWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLEDA 143 (248)
T ss_pred CCeEEEEEecCccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 45555555555666899999999999988 999997778888888888765
No 253
>PF15584 Imm44: Immunity protein 44
Probab=30.21 E-value=24 Score=30.12 Aligned_cols=19 Identities=26% Similarity=0.338 Sum_probs=15.3
Q ss_pred CCcEEEecCCCccCCcEEE
Q 001877 144 PGDIVEVNVGCKIPADMRM 162 (1001)
Q Consensus 144 ~GDiI~l~~G~~iPaD~~l 162 (1001)
+.+-..++.|++|||||+=
T Consensus 13 ~~~~~~I~SG~~iP~~GIw 31 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIW 31 (94)
T ss_pred CCCCCEEecCCCcccCCeE
Confidence 3455678899999999975
No 254
>PLN02591 tryptophan synthase
Probab=29.73 E-value=3.1e+02 Score=28.96 Aligned_cols=100 Identities=18% Similarity=0.249 Sum_probs=54.1
Q ss_pred CCCcHHHHHHHHHHHhCCcEEE-EEcCCC-HHHHHHHHHHh-CCCCcccccccccccchhhccCChHHHHHhhccceEEE
Q 001877 591 DPPREEVKNAMLSCMTAGIRVI-VVTGDN-KSTAESICHKI-GAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT 667 (1001)
Q Consensus 591 d~~~~~~~~~I~~l~~~gi~v~-~~TGd~-~~~a~~ia~~~-gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (1001)
|=+-++..+..+.+++.|+..+ ++|-.. .+..+.+++.. |..... . ..-++|..-
T Consensus 114 DLP~ee~~~~~~~~~~~gl~~I~lv~Ptt~~~ri~~ia~~~~gFIY~V-s--~~GvTG~~~------------------- 171 (250)
T PLN02591 114 DLPLEETEALRAEAAKNGIELVLLTTPTTPTERMKAIAEASEGFVYLV-S--STGVTGARA------------------- 171 (250)
T ss_pred CCCHHHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHhCCCcEEEe-e--CCCCcCCCc-------------------
Confidence 3344677777777777777644 444444 34556666554 221100 0 011111100
Q ss_pred EeChhhHHHHHHHHhccCCEEEEEeCCcc---CHHHHhcC-CceEEecCc
Q 001877 668 RVEPSHKRMLVEALQNQNEVVAMTGDGVN---DAPALKKA-DIGIAMGSG 713 (1001)
Q Consensus 668 r~~p~~K~~~v~~l~~~~~~v~~iGDg~N---D~~~l~~A-~vgIam~~~ 713 (1001)
..|++-.+.++.+++....-.++|=|.+ |+..+..+ -=|+-+|++
T Consensus 172 -~~~~~~~~~i~~vk~~~~~Pv~vGFGI~~~e~v~~~~~~GADGvIVGSa 220 (250)
T PLN02591 172 -SVSGRVESLLQELKEVTDKPVAVGFGISKPEHAKQIAGWGADGVIVGSA 220 (250)
T ss_pred -CCchhHHHHHHHHHhcCCCceEEeCCCCCHHHHHHHHhcCCCEEEECHH
Confidence 1255556778888876666677899998 55555554 345666543
No 255
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=29.65 E-value=7.6e+02 Score=31.81 Aligned_cols=187 Identities=15% Similarity=0.169 Sum_probs=101.1
Q ss_pred CCCCcEEEecCCCccCCcEEEeeecCCceEEecccccCCCcccccchhhhcccccccCCC-------Cce---EEeccee
Q 001877 142 LVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDK-------TNI---LFSGTVV 211 (1001)
Q Consensus 142 Lv~GDiI~l~~G~~iPaD~~ll~~~~g~~~Vdes~LtGEs~pv~k~~~~~~~~~~~~~~~-------~n~---l~~Gt~v 211 (1001)
++-|..+.+...|.+|-|.+.++ .++.+=.|--.+.+...-+.... .++ +..+.+| .+. +-+...+
T Consensus 145 ~R~g~~~~i~a~eLVpGDiV~l~-~gd~vPAD~rLl~~~~l~VdEs~--LTG-ES~pv~K~~~~~~~~~~~~~~d~~n~l 220 (917)
T COG0474 145 LRDGKFVEIPASELVPGDIVLLE-AGDVVPADLRLLESSDLEVDESA--LTG-ESLPVEKQALPLTKSDAPLGLDRDNML 220 (917)
T ss_pred EeCCcEEEecHHHCCCCcEEEEC-CCCccccceEEEEecCceEEccc--ccC-CCcchhccccccccccccccCCccceE
Confidence 34789999999999999999997 12333344444555442222211 111 1111111 111 2446777
Q ss_pred ecceEEEEEEEecccccchh---HHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccchHHH
Q 001877 212 VAGRARAVVVGVGANTAMGS---IRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGA 288 (1001)
Q Consensus 212 ~~g~~~~~V~~tG~~T~~g~---i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (1001)
.+|+...--...|.-+..|. +.+.... -....+.+..+++-...+...++.++++..++.+... ++..
T Consensus 221 ~sGt~V~~G~~~giVvaTG~~T~~G~ia~~-~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~-------~~~~- 291 (917)
T COG0474 221 FSGTTVVSGRAKGIVVATGFETEFGKIARL-LPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVG-------LFRG- 291 (917)
T ss_pred EeCCEEEcceEEEEEEEEcCccHHHHHHHh-hccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHhc-
Confidence 78886555555555555553 3222222 2222256677777777777777777776665543321 0000
Q ss_pred HHHHHHHHHHHHHhcCCchHHHHHHHHHHhhHhhhhccccccccccccccCCeeE
Q 001877 289 IHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTV 343 (1001)
Q Consensus 289 ~~~~~~~i~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~i~~k~~~~~e~lg~v~~ 343 (1001)
...+...+...+.+.--+.|..+++....+...-++ .+.|+...+..|-.+++
T Consensus 292 ~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~--~mak~~~ivr~l~avE~ 344 (917)
T COG0474 292 GNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQ--RMAKDNAIVRSLNAIET 344 (917)
T ss_pred CccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHH--HHHhccchhhccchhhh
Confidence 000233444455666667788888888877655443 34556555555555443
No 256
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=29.22 E-value=97 Score=35.82 Aligned_cols=106 Identities=14% Similarity=0.114 Sum_probs=55.4
Q ss_pred cHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCC------cccccccccccchh----------hccCC-----
Q 001877 594 REEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFD------HLVDFVGRSYTASE----------FEELP----- 652 (1001)
Q Consensus 594 ~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~------~~~~~~~~~~~~~~----------~~~~~----- 652 (1001)
.|+.+..++++|++|.++.++|+-+..-+..++.-+ +.. ...+....++.+.. +..+.
T Consensus 185 ~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl-~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~g~ 263 (448)
T PF05761_consen 185 DPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYL-LGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTETGK 263 (448)
T ss_dssp -CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHH-CGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTTSS
T ss_pred CchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhc-cCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCCCc
Confidence 467899999999999999999999999998887765 222 22222223332211 00000
Q ss_pred --hHHHHHhhccceEEEEeChhhHHHHHHHHhccCCEEEEEeCCc-cCHHHHhc
Q 001877 653 --AMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGV-NDAPALKK 703 (1001)
Q Consensus 653 --~~~~~~~~~~~~v~~r~~p~~K~~~v~~l~~~~~~v~~iGDg~-ND~~~l~~ 703 (1001)
.......+++..||+.-+-. .+.+.+...|..|+.+||.. .|+.--+.
T Consensus 264 l~~~~~~~~l~~g~vY~gGn~~---~l~~ll~~~g~~VLY~GDhi~~Di~~~k~ 314 (448)
T PF05761_consen 264 LKWGKYVGPLEKGKVYSGGNWD---QLHKLLGWRGKEVLYFGDHIYGDILKSKK 314 (448)
T ss_dssp EECS---SS--TC-EEEE--HH---HHHHHCT--GGGEEEEESSTTTTHHHHHH
T ss_pred cccccccccccCCCEeecCCHH---HHHHHHccCCCeEEEECCchhhhhhhhcc
Confidence 00001123334456554443 33444556689999999984 67765444
No 257
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=29.00 E-value=1.4e+02 Score=31.57 Aligned_cols=102 Identities=14% Similarity=0.151 Sum_probs=61.5
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHH---HhCCCCcccccccccccchhhc----cCChHHHHHhhccceE
Q 001877 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICH---KIGAFDHLVDFVGRSYTASEFE----ELPAMQQTVALQHMAL 665 (1001)
Q Consensus 593 ~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~---~~gi~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~v 665 (1001)
+.+++++.|+.+++.|+.|.-+|.+.+.......+ ++||.-.... ...+... ..........+.+..+
T Consensus 82 ie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~-----~~~~~~~~~~~~~~~~~~~~~~~~GIl 156 (252)
T PF11019_consen 82 IESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSS-----FPEDGIISFPVFDSALSRAPSFYDGIL 156 (252)
T ss_pred cchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccc-----cccCcceecccccCCCCCCceeecCeE
Confidence 56789999999999999999999999776655544 4676543211 0000000 0000111112233445
Q ss_pred EEEeChhhHHHHHHHHhc----cCCEEEEEeCCccCHHHH
Q 001877 666 FTRVEPSHKRMLVEALQN----QNEVVAMTGDGVNDAPAL 701 (1001)
Q Consensus 666 ~~r~~p~~K~~~v~~l~~----~~~~v~~iGDg~ND~~~l 701 (1001)
| ++..+|+.++..+-. .-+.|.+|-|....+..+
T Consensus 157 f--t~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv 194 (252)
T PF11019_consen 157 F--TGGQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSV 194 (252)
T ss_pred E--eCCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHH
Confidence 5 335678877766543 356899999988776544
No 258
>PRK05886 yajC preprotein translocase subunit YajC; Validated
Probab=27.87 E-value=1.2e+02 Score=27.28 Aligned_cols=6 Identities=33% Similarity=0.717 Sum_probs=2.3
Q ss_pred cEEEec
Q 001877 146 DIVEVN 151 (1001)
Q Consensus 146 DiI~l~ 151 (1001)
|.|.|+
T Consensus 61 ~~v~le 66 (109)
T PRK05886 61 DTVDLE 66 (109)
T ss_pred CEEEEE
Confidence 334333
No 259
>PTZ00445 p36-lilke protein; Provisional
Probab=27.48 E-value=43 Score=34.00 Aligned_cols=29 Identities=21% Similarity=0.114 Sum_probs=25.9
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEcCCCHHH
Q 001877 593 PREEVKNAMLSCMTAGIRVIVVTGDNKST 621 (1001)
Q Consensus 593 ~~~~~~~~I~~l~~~gi~v~~~TGd~~~~ 621 (1001)
++|+.++-+++|+++||+|+++|=-+..+
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~ 104 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKEL 104 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchhh
Confidence 79999999999999999999999766544
No 260
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=26.67 E-value=31 Score=34.49 Aligned_cols=13 Identities=38% Similarity=0.363 Sum_probs=12.0
Q ss_pred EEeCCCCccccCc
Q 001877 344 ICSDKTGTLTTNM 356 (1001)
Q Consensus 344 i~~DKTGTLT~n~ 356 (1001)
+|||.+||||.+.
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 6899999999987
No 261
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=26.32 E-value=1.4e+02 Score=24.45 Aligned_cols=32 Identities=28% Similarity=0.300 Sum_probs=23.8
Q ss_pred CCcEEEEECCeEEEeeCC---CCCCCcEEEecCCC
Q 001877 123 ADIATVLRNGCFSILPAA---ELVPGDIVEVNVGC 154 (1001)
Q Consensus 123 ~~~~~v~R~g~~~~i~~~---~Lv~GDiI~l~~G~ 154 (1001)
...++|-.+|..++|+.. ++.|||-|.+..|.
T Consensus 16 ~~~A~v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~ 50 (68)
T PF01455_consen 16 GGMAVVDFGGVRREVSLALVPDVKVGDYVLVHAGF 50 (68)
T ss_dssp TTEEEEEETTEEEEEEGTTCTSB-TT-EEEEETTE
T ss_pred CCEEEEEcCCcEEEEEEEEeCCCCCCCEEEEecCh
Confidence 346788889999998654 57899999999884
No 262
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=26.29 E-value=4.4e+02 Score=28.46 Aligned_cols=62 Identities=16% Similarity=0.210 Sum_probs=34.7
Q ss_pred EEEeChhhHHHHHHHHhc--cCCEEEEEeCCccC----HHHHhcCCceEEec-Ccc---HHHHhhcCeeecC
Q 001877 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDGVND----APALKKADIGIAMG-SGT---AVAKSASDMVLAD 727 (1001)
Q Consensus 666 ~~r~~p~~K~~~v~~l~~--~~~~v~~iGDg~ND----~~~l~~A~vgIam~-~~~---~~~~~~ad~v~~~ 727 (1001)
|.=|||..=.++++...- .|+.|+.+|-+..= +-||...+--|.+- +-+ ......||+++..
T Consensus 134 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~~~~~~ADIvIsA 205 (287)
T PRK14173 134 LEPCTPAGVVRLLKHYGIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLPAVTRRADVLVVA 205 (287)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEe
Confidence 334666655555555442 37889999987431 33555555555442 111 2334568888753
No 263
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=25.33 E-value=82 Score=30.56 Aligned_cols=45 Identities=20% Similarity=0.286 Sum_probs=36.0
Q ss_pred CcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHH
Q 001877 580 DLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESIC 626 (1001)
Q Consensus 580 ~l~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia 626 (1001)
+-.++|+-.-- -.+++..+++..++.|++++-+||++--....++
T Consensus 110 GDvLigISTSG--NS~nVl~Ai~~Ak~~gm~vI~ltG~~GG~~~~~~ 154 (176)
T COG0279 110 GDVLIGISTSG--NSKNVLKAIEAAKEKGMTVIALTGKDGGKLAGLL 154 (176)
T ss_pred CCEEEEEeCCC--CCHHHHHHHHHHHHcCCEEEEEecCCCccccccc
Confidence 34677765544 4689999999999999999999999876666555
No 264
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D ....
Probab=25.25 E-value=1.6e+02 Score=25.28 Aligned_cols=49 Identities=16% Similarity=0.059 Sum_probs=39.5
Q ss_pred EEecccC---CCcHHHHHHHHHHHhCCcEEEEE-cCCCHHHHHHHHHHhCCCC
Q 001877 585 GLVGMLD---PPREEVKNAMLSCMTAGIRVIVV-TGDNKSTAESICHKIGAFD 633 (1001)
Q Consensus 585 G~i~~~d---~~~~~~~~~I~~l~~~gi~v~~~-TGd~~~~a~~ia~~~gi~~ 633 (1001)
.++.+.+ +..+-+.+..+.|+++|+++.+- ++++......-|...|+.-
T Consensus 3 ~Ii~~~~~~~~~~~~a~~l~~~L~~~gi~v~~d~~~~~~~k~~~~a~~~g~p~ 55 (94)
T PF03129_consen 3 VIIPVGKKDEEIIEYAQELANKLRKAGIRVELDDSDKSLGKQIKYADKLGIPF 55 (94)
T ss_dssp EEEESSCSHHHHHHHHHHHHHHHHHTTSEEEEESSSSTHHHHHHHHHHTTESE
T ss_pred EEEEeCCCcHHHHHHHHHHHHHHHHCCCEEEEECCCCchhHHHHHHhhcCCeE
Confidence 4556666 67788889999999999998887 6677777788888888764
No 265
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=25.06 E-value=1e+03 Score=30.49 Aligned_cols=120 Identities=13% Similarity=0.145 Sum_probs=57.5
Q ss_pred CcEEEecCCCccCCcEEEeeecCCc-eEEecccccCCCcccccch-----hhhcccccc-cCCCCceEEecceeecceEE
Q 001877 145 GDIVEVNVGCKIPADMRMIEMLSNQ-LRVDQAILTGESCSVEKEL-----DSIIATNAV-YQDKTNILFSGTVVVAGRAR 217 (1001)
Q Consensus 145 GDiI~l~~G~~iPaD~~ll~~~~g~-~~Vdes~LtGEs~pv~k~~-----~~~~~~~~~-~~~~~n~l~~Gt~v~~g~~~ 217 (1001)
|....+...|.+|-|.++++ .|+ +-+|=-.+.|+..-+.-.. .+....... ..+..+..-++..+..|+..
T Consensus 139 g~~~~I~~~eLv~GDiV~l~--~Gd~VPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v 216 (867)
T TIGR01524 139 GSMDEVPIDALVPGDLIELA--AGDIIPADARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNV 216 (867)
T ss_pred CeEEEEEhhcCCCCCEEEEC--CCCEEcccEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeE
Confidence 77889999999999999996 343 4455555566553332211 111100000 01122334456667777754
Q ss_pred EEEEEecccccchh--HHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Q 001877 218 AVVVGVGANTAMGS--IRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVL 267 (1001)
Q Consensus 218 ~~V~~tG~~T~~g~--i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 267 (1001)
.-=...+.-+..|. ....+.+.-.+ ..-+..+++....+...+..++++
T Consensus 217 ~~G~~~~~V~~tG~~T~~gki~~~v~~-~~~~t~lq~~~~~i~~~~~~~~~~ 267 (867)
T TIGR01524 217 LSGHAQAVVLATGSSTWFGSLAIAATE-RRGQTAFDKGVKSVSKLLIRFMLV 267 (867)
T ss_pred EEeEEEEEEEEEcCccHHHHHHHHhhC-CCCCCcHHHHHHHHHHHHHHHHHH
Confidence 33233333344342 22233333333 222234555555555544444433
No 266
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=24.67 E-value=77 Score=29.10 Aligned_cols=30 Identities=17% Similarity=0.159 Sum_probs=25.3
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEcCCCHHHH
Q 001877 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTA 622 (1001)
Q Consensus 593 ~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a 622 (1001)
-.+++.++++.+++.|.+++.+|+......
T Consensus 58 ~t~e~~~~~~~a~~~g~~vi~iT~~~~s~l 87 (126)
T cd05008 58 ETADTLAALRLAKEKGAKTVAITNVVGSTL 87 (126)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEECCCCChH
Confidence 456799999999999999999999865443
No 267
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=24.62 E-value=57 Score=30.09 Aligned_cols=33 Identities=24% Similarity=0.378 Sum_probs=27.3
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHH
Q 001877 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESI 625 (1001)
Q Consensus 593 ~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~i 625 (1001)
-.+++.++++.+|++|++++.+|+.+.......
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s~la~~ 91 (128)
T cd05014 59 ETDELLNLLPHLKRRGAPIIAITGNPNSTLAKL 91 (128)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeCCCCCchhhh
Confidence 567899999999999999999999876554443
No 268
>COG3071 HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism]
Probab=24.40 E-value=1.9e+02 Score=32.31 Aligned_cols=39 Identities=18% Similarity=0.306 Sum_probs=19.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHh-hcccchhhhhhhccc
Q 001877 953 DWTAVFYLSFPVIIIDEVLKFFSR-KSSGMRFKFWFRRHD 991 (1001)
Q Consensus 953 ~w~~~~~~~~~~l~~~e~~K~~~r-~~~~~~~~~~~~~~~ 991 (1001)
.|.+++.+.+...++-.+.+++.+ ...|...+.||++.+
T Consensus 41 l~~lv~~~ii~lvv~~~l~~~l~~v~~~~~~~~~w~~~rK 80 (400)
T COG3071 41 LTTLVIFLIIALVVLYLLEWLLRRVLRTPAHTRGWFSRRK 80 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 344444443333333334444433 445667899998533
No 269
>cd00859 HisRS_anticodon HisRS Histidyl-anticodon binding domain. HisRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=24.07 E-value=1.8e+02 Score=24.33 Aligned_cols=47 Identities=17% Similarity=0.119 Sum_probs=36.5
Q ss_pred EecccCCCcHHHHHHHHHHHhCCcEEEEE-cCCCHHHHHHHHHHhCCC
Q 001877 586 LVGMLDPPREEVKNAMLSCMTAGIRVIVV-TGDNKSTAESICHKIGAF 632 (1001)
Q Consensus 586 ~i~~~d~~~~~~~~~I~~l~~~gi~v~~~-TGd~~~~a~~ia~~~gi~ 632 (1001)
++...++.++.+.+..+.|+++|+++.+. .+++.......|++.|+.
T Consensus 6 i~~~~~~~~~~a~~i~~~Lr~~g~~v~~~~~~~~~~~~~~~a~~~~~~ 53 (91)
T cd00859 6 VVPLGEGALSEALELAEQLRDAGIKAEIDYGGRKLKKQFKYADRSGAR 53 (91)
T ss_pred EEEcChHHHHHHHHHHHHHHHCCCEEEEecCCCCHHHHHHHHHHcCCC
Confidence 34456667788888999999999999874 455777788888888864
No 270
>PF05240 APOBEC_C: APOBEC-like C-terminal domain; InterPro: IPR007904 This domain is found at the C terminus of the Apolipoprotein B mRNA editing enzyme. Apobec-1 catalyzes C to U editing of apolipoprotein B (apoB) mRNA in the mammalian intestine. C to U RNA editing of mammalian apolipoprotein B (apoB) RNA is a site-specific posttranscriptional modification in which a single cytidine is enzymatically deaminated to uridine, thereby generating a UAA stop codon in the edited mRNA. The function of this domain is currently unknown.; GO: 0008270 zinc ion binding, 0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines; PDB: 2NYT_D.
Probab=23.11 E-value=1.1e+02 Score=23.85 Aligned_cols=25 Identities=16% Similarity=0.196 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHhCCcEEEEEcCCCH
Q 001877 595 EEVKNAMLSCMTAGIRVIVVTGDNK 619 (1001)
Q Consensus 595 ~~~~~~I~~l~~~gi~v~~~TGd~~ 619 (1001)
++-++.++.|.++|++|-|.|-+..
T Consensus 2 ~~~qegLr~L~~aG~~v~iM~~~eF 26 (55)
T PF05240_consen 2 PDYQEGLRRLCQAGAQVSIMTYSEF 26 (55)
T ss_dssp HHHHHHHHHHHHTT-EEEE--HHHH
T ss_pred cHHHHHHHHHHHCCCeEEecCcHHH
Confidence 6778999999999999999876543
No 271
>PRK08433 flagellar motor switch protein; Validated
Probab=22.94 E-value=48 Score=29.98 Aligned_cols=44 Identities=11% Similarity=0.089 Sum_probs=25.0
Q ss_pred HHHHHHHHhcCCCcEEEEECCeEEEeeCCCCCCCcEEEecCCCccCCcE
Q 001877 112 EKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADM 160 (1001)
Q Consensus 112 ~~~~~~l~~~~~~~~~v~R~g~~~~i~~~~Lv~GDiI~l~~G~~iPaD~ 160 (1001)
++.+.++.......+.| ...+...++.+.|++.+++||++|-|-
T Consensus 20 ~~~~~~~~~L~~v~VeV-----~v~LG~t~itl~dlL~Lq~GDVI~Ld~ 63 (111)
T PRK08433 20 EELICDYENLLDIEVDF-----SAELGTTQISLLEILKFEKGSVIDLEK 63 (111)
T ss_pred HHhhhhHHHhccceeEE-----EEEEecccccHHHHhCCCCCCEEEeCC
Confidence 35566666655444433 234555566666666666666666653
No 272
>PF02699 YajC: Preprotein translocase subunit; InterPro: IPR003849 Secretion across the inner membrane in some Gram-negative bacteria occurs via the preprotein translocase pathway. Proteins are produced in the cytoplasm as precursors, and require a chaperone subunit to direct them to the translocase component []. From there, the mature proteins are either targeted to the outer membrane, or remain as periplasmic proteins []. The translocase protein subunits are encoded on the bacterial chromosome. The translocase itself comprises 7 proteins, including a chaperone (SecB), ATPase (SecA), an integral membrane complex (SecY, SecE and SecG), and two additional membrane proteins that promote the release of the mature peptide into the periplasm (SecD and SecF) []. Other cytoplasmic/periplasmic proteins play a part in preprotein translocase activity, namely YidC and YajC []. The latter is bound in a complex to SecD and SecF, and plays a part in stabilising and regulating secretion through the SecYEG integral membrane component via SecA []. Homologues of the YajC gene have been found in a range of pathogenic and commensal microbes. Brucella abortis YajC- and SecD-like proteins were shown to stimulate a Th1 cell-mediated immune response in mice, and conferred protection when challenged with B.abortis []. Therefore, these proteins may have an antigenic role as well as a secretory one in virulent bacteria []. A number of previously uncharacterised "hypothetical" proteins also show similarity to E.coli YajC, suggesting that this family is wider than first thought []. More recently, the precise interactions between the E.coli SecYEG complex, SecD, SecF, YajC and YidC have been studied []. Rather than acting individually, the four proteins form a heterotetrameric complex and associate with the SecYEG heterotrimeric complex []. The SecF and YajC subunits link the complex to the integral membrane translocase. ; PDB: 2RDD_B.
Probab=22.93 E-value=1.1e+02 Score=26.00 Aligned_cols=14 Identities=50% Similarity=0.551 Sum_probs=0.4
Q ss_pred CCCCCCcEEEecCC
Q 001877 140 AELVPGDIVEVNVG 153 (1001)
Q Consensus 140 ~~Lv~GDiI~l~~G 153 (1001)
++|+|||-|....|
T Consensus 35 ~~Lk~Gd~VvT~gG 48 (82)
T PF02699_consen 35 ASLKPGDEVVTIGG 48 (82)
T ss_dssp G-------------
T ss_pred HcCCCCCEEEECCc
Confidence 36777777766655
No 273
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=22.69 E-value=55 Score=25.19 Aligned_cols=12 Identities=33% Similarity=0.595 Sum_probs=10.1
Q ss_pred CCCcEEEecCCC
Q 001877 143 VPGDIVEVNVGC 154 (1001)
Q Consensus 143 v~GDiI~l~~G~ 154 (1001)
.+||+|.|+.|-
T Consensus 2 ~~GDvV~LKSGG 13 (53)
T PF09926_consen 2 KIGDVVQLKSGG 13 (53)
T ss_pred CCCCEEEEccCC
Confidence 589999999874
No 274
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=22.53 E-value=1.1e+02 Score=32.88 Aligned_cols=48 Identities=21% Similarity=0.287 Sum_probs=40.4
Q ss_pred EEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHH---hCCC
Q 001877 585 GLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHK---IGAF 632 (1001)
Q Consensus 585 G~i~~~d~~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~---~gi~ 632 (1001)
|++-..+.+-|++.++++.|++.|-++.++|..+-.+-+..+++ +|+.
T Consensus 31 GVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 31 GVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred cceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 56666789999999999999999999999999998887777664 5554
No 275
>cd05710 SIS_1 A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=22.34 E-value=78 Score=29.05 Aligned_cols=30 Identities=27% Similarity=0.206 Sum_probs=26.1
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEcCCCHHHH
Q 001877 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTA 622 (1001)
Q Consensus 593 ~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a 622 (1001)
-.+++.++++.+|+.|.+++.+|+......
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s~l 88 (120)
T cd05710 59 NTKETVAAAKFAKEKGATVIGLTDDEDSPL 88 (120)
T ss_pred CChHHHHHHHHHHHcCCeEEEEECCCCCcH
Confidence 568999999999999999999999876543
No 276
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=22.30 E-value=7.5e+02 Score=31.75 Aligned_cols=37 Identities=16% Similarity=0.353 Sum_probs=23.6
Q ss_pred CCcEEEecCCCccCCcEEEeeecCCceEEecccccCCC
Q 001877 144 PGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGES 181 (1001)
Q Consensus 144 ~GDiI~l~~G~~iPaD~~ll~~~~g~~~Vdes~LtGEs 181 (1001)
-|....+...|.+|-|.++++. +..+-+|=-.+.|+.
T Consensus 124 dg~~~~I~~~eLv~GDiv~l~~-Gd~IPaDg~ii~g~~ 160 (884)
T TIGR01522 124 EGKLEHVLASTLVPGDLVCLSV-GDRVPADLRIVEAVD 160 (884)
T ss_pred CCEEEEEEHHHCccCCEEEecC-CCEEeeeEEEEEcCc
Confidence 3666777788888888888751 233445555555543
No 277
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=22.22 E-value=61 Score=32.59 Aligned_cols=29 Identities=17% Similarity=0.335 Sum_probs=23.4
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHH
Q 001877 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKS 620 (1001)
Q Consensus 592 ~~~~~~~~~I~~l~~~gi~v~~~TGd~~~ 620 (1001)
++-|++.+++++|++.|..++++|+++..
T Consensus 73 ~p~~gA~e~l~~L~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 73 PPIPGAVEALKKLRDKGHEIVIITARPPE 101 (191)
T ss_dssp -B-TTHHHHHHHHHTSTTEEEEEEE-SSS
T ss_pred CccHHHHHHHHHHHHcCCcEEEEEecCcc
Confidence 46689999999999999999999988754
No 278
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=22.02 E-value=2.5e+02 Score=29.08 Aligned_cols=114 Identities=12% Similarity=0.090 Sum_probs=68.4
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhC-CCCcccccccccc-cchhhccCChHHHHHhhccceEEEEeC
Q 001877 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIG-AFDHLVDFVGRSY-TASEFEELPAMQQTVALQHMALFTRVE 670 (1001)
Q Consensus 593 ~~~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~g-i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~r~~ 670 (1001)
+-||+..-++.|+..|+.+.++|+.+..++..-.+..+ +.... . ..+. ++.++..- .-.
T Consensus 93 ~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f-~--~~v~~d~~~v~~g----------------KP~ 153 (222)
T KOG2914|consen 93 LMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNF-S--HVVLGDDPEVKNG----------------KPD 153 (222)
T ss_pred cCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhc-C--CCeecCCccccCC----------------CCC
Confidence 45599999999999999999999998777766555544 22211 0 0111 12222111 122
Q ss_pred hhhHHHHHHHHhccC-CEEEEEeCCccCHHHHhcCCceEEec-C--ccHHHHhhcCeee
Q 001877 671 PSHKRMLVEALQNQN-EVVAMTGDGVNDAPALKKADIGIAMG-S--GTAVAKSASDMVL 725 (1001)
Q Consensus 671 p~~K~~~v~~l~~~~-~~v~~iGDg~ND~~~l~~A~vgIam~-~--~~~~~~~~ad~v~ 725 (1001)
|+-=....+.+.... +.++++.|..+=+.|-++|+.-+-|- + -+....+.+++++
T Consensus 154 Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~ 212 (222)
T KOG2914|consen 154 PDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLIL 212 (222)
T ss_pred chHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhhhccceec
Confidence 333344555555555 78888888888888888888765542 1 2333344445544
No 279
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=21.73 E-value=2.4e+02 Score=25.54 Aligned_cols=39 Identities=5% Similarity=0.134 Sum_probs=22.9
Q ss_pred HHHHHHHHHhCCcEEEEEcC---CC-----HHHHHHHHHHhCCCCcc
Q 001877 597 VKNAMLSCMTAGIRVIVVTG---DN-----KSTAESICHKIGAFDHL 635 (1001)
Q Consensus 597 ~~~~I~~l~~~gi~v~~~TG---d~-----~~~a~~ia~~~gi~~~~ 635 (1001)
+++-++.++++|++.+|.=- +. ...-...|+++|+....
T Consensus 16 ~~~d~~~la~~GfktVInlRpd~E~~~qp~~~~~~~~a~~~Gl~y~~ 62 (110)
T PF04273_consen 16 SPEDLAQLAAQGFKTVINLRPDGEEPGQPSSAEEAAAAEALGLQYVH 62 (110)
T ss_dssp -HHHHHHHHHCT--EEEE-S-TTSTTT-T-HHCHHHHHHHCT-EEEE
T ss_pred CHHHHHHHHHCCCcEEEECCCCCCCCCCCCHHHHHHHHHHcCCeEEE
Confidence 35667889999999888853 21 11235678999987543
No 280
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=21.56 E-value=5.4e+02 Score=27.26 Aligned_cols=42 Identities=21% Similarity=0.287 Sum_probs=27.8
Q ss_pred cccCCCcHHHHHHHHHHHhCCcEEE-EEcCCC-HHHHHHHHHHh
Q 001877 588 GMLDPPREEVKNAMLSCMTAGIRVI-VVTGDN-KSTAESICHKI 629 (1001)
Q Consensus 588 ~~~d~~~~~~~~~I~~l~~~gi~v~-~~TGd~-~~~a~~ia~~~ 629 (1001)
.+-|.+-++..+.++.+++.|++.+ +++-.. .+....+++..
T Consensus 120 iipDlp~ee~~~~~~~~~~~gl~~i~lv~P~T~~eri~~i~~~~ 163 (256)
T TIGR00262 120 LVADLPLEESGDLVEAAKKHGVKPIFLVAPNADDERLKQIAEKS 163 (256)
T ss_pred EECCCChHHHHHHHHHHHHCCCcEEEEECCCCCHHHHHHHHHhC
Confidence 3445566778888888888888844 565555 34556666654
No 281
>COG1862 YajC Preprotein translocase subunit YajC [Intracellular trafficking and secretion]
Probab=20.94 E-value=1.8e+02 Score=25.58 Aligned_cols=13 Identities=38% Similarity=0.322 Sum_probs=5.8
Q ss_pred CCCCCcEEEecCC
Q 001877 141 ELVPGDIVEVNVG 153 (1001)
Q Consensus 141 ~Lv~GDiI~l~~G 153 (1001)
+|++||-|...-|
T Consensus 43 sL~kGD~VvT~gG 55 (97)
T COG1862 43 SLKKGDEVVTIGG 55 (97)
T ss_pred hccCCCEEEEcCC
Confidence 3444554444433
No 282
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=20.93 E-value=32 Score=35.81 Aligned_cols=16 Identities=19% Similarity=0.171 Sum_probs=0.0
Q ss_pred ccCchhHHHHHHHHHH
Q 001877 948 PLSWADWTAVFYLSFP 963 (1001)
Q Consensus 948 ~l~~~~w~~~~~~~~~ 963 (1001)
.+.=.+|++.|+..++
T Consensus 166 ~L~dL~WL~LFlaiLI 181 (381)
T PF05297_consen 166 ILVDLYWLLLFLAILI 181 (381)
T ss_dssp ----------------
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3443467666544443
No 283
>PF03904 DUF334: Domain of unknown function (DUF334); InterPro: IPR005602 This is a family of proteins found in Staphylococcus aureus plasmid with no characterised function.
Probab=20.81 E-value=2.2e+02 Score=29.08 Aligned_cols=12 Identities=17% Similarity=0.066 Sum_probs=5.1
Q ss_pred HHHHHHHHHHHH
Q 001877 955 TAVFYLSFPVII 966 (1001)
Q Consensus 955 ~~~~~~~~~~l~ 966 (1001)
+|.++.++++++
T Consensus 201 lwyi~Y~vPY~~ 212 (230)
T PF03904_consen 201 LWYIAYLVPYIF 212 (230)
T ss_pred HHHHHHhhHHHH
Confidence 444444444433
No 284
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.69 E-value=7.2e+02 Score=26.86 Aligned_cols=62 Identities=16% Similarity=0.199 Sum_probs=35.5
Q ss_pred EEEeChhhHHHHHHHHhc--cCCEEEEEeCCccC----HHHHhcC----CceEEec--Cc--cHHHHhhcCeeecC
Q 001877 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDGVND----APALKKA----DIGIAMG--SG--TAVAKSASDMVLAD 727 (1001)
Q Consensus 666 ~~r~~p~~K~~~v~~l~~--~~~~v~~iGDg~ND----~~~l~~A----~vgIam~--~~--~~~~~~~ad~v~~~ 727 (1001)
|.=|||..=.++++..+- .|+.|+.+|-+..= +.||... |-.|.+- .. -......||+++..
T Consensus 132 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~AtVtvchs~T~~l~~~~~~ADIvV~A 207 (287)
T PRK14181 132 FIPCTPAGIIELLKYYEIPLHGRHVAIVGRSNIVGKPLAALLMQKHPDTNATVTLLHSQSENLTEILKTADIIIAA 207 (287)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHhCcCCCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 344666665666655542 38999999998542 3355544 4444442 11 23344678998753
No 285
>TIGR00540 hemY_coli hemY protein. This is an uncharacterized protein encoded next to a heme-biosynthetic enzyme in two gamma division proteobacteria (E. coli and H. influenzae). It is known in no other species. The gene symbol hemY is unfortunate in that an unrelated protein, protoporphyrinogen oxidase, is designated as HemG in E. coli but as HemY in Bacillus subtilis.
Probab=20.61 E-value=1.6e+02 Score=33.69 Aligned_cols=41 Identities=15% Similarity=0.135 Sum_probs=23.1
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHh-hcccchhhhhhhc
Q 001877 949 LSWADWTAVFYLSFPVIIIDEVLKFFSR-KSSGMRFKFWFRR 989 (1001)
Q Consensus 949 l~~~~w~~~~~~~~~~l~~~e~~K~~~r-~~~~~~~~~~~~~ 989 (1001)
+..+.|..+++++++++++-.+++++.+ ...|...++|+.+
T Consensus 37 ie~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~ 78 (409)
T TIGR00540 37 IEMSITGLAIFFIIALAIIFAFEWGLRRFFRLGAHSRGWFSG 78 (409)
T ss_pred EEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 3344566665555554444445555554 3446777788655
No 286
>PRK00208 thiG thiazole synthase; Reviewed
Probab=20.28 E-value=1e+03 Score=25.05 Aligned_cols=50 Identities=10% Similarity=0.090 Sum_probs=39.1
Q ss_pred CCcEEEEEecccCCCcHHHHHHHHHHHhC---CcEEEEEcCCCHHHHHHHHHH
Q 001877 579 KDLTFIGLVGMLDPPREEVKNAMLSCMTA---GIRVIVVTGDNKSTAESICHK 628 (1001)
Q Consensus 579 ~~l~~lG~i~~~d~~~~~~~~~I~~l~~~---gi~v~~~TGd~~~~a~~ia~~ 628 (1001)
.|++=+=+++=.+-+.|+..++++.+++. |..++-.+-|++..|++++.-
T Consensus 91 ~~~iKlEVi~d~~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~~~ 143 (250)
T PRK00208 91 TNWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEEA 143 (250)
T ss_pred CCeEEEEEecCCCCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 45555556665666899999999999988 999996777778888887754
No 287
>COG0309 HypE Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]
Probab=20.11 E-value=3.6e+02 Score=29.66 Aligned_cols=85 Identities=19% Similarity=0.339 Sum_probs=64.7
Q ss_pred EecccCCCcHHHHHHHHHHH-hCCcEEEEEcCCC--HHHHHHHHHHhCCCCcccccccccccchhhccCChHHHHHhhcc
Q 001877 586 LVGMLDPPREEVKNAMLSCM-TAGIRVIVVTGDN--KSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQH 662 (1001)
Q Consensus 586 ~i~~~d~~~~~~~~~I~~l~-~~gi~v~~~TGd~--~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (1001)
.++++|+-|-+...++.++- ++|+.+.+--.+- .+.++.+++.+|+++.... .+
T Consensus 219 vtAMhDaTrGGla~aLnEmA~aSgvgi~I~ee~Ipv~~eVr~vce~lGiDPl~~a-----------------------nE 275 (339)
T COG0309 219 VTAMHDATRGGLAGALNEMAEASGVGISIEEEKIPVREEVRGVCELLGLDPLELA-----------------------NE 275 (339)
T ss_pred hhhccCCchhHHHHHHHHHHHHcCCeEEEeeccccccHHHHHHHHHhCCCHHHhh-----------------------cC
Confidence 67899999999999998885 5677777765554 5678999999999875322 22
Q ss_pred ceEEEEeChhhHHHHHHHHhccC-CEEEEEeC
Q 001877 663 MALFTRVEPSHKRMLVEALQNQN-EVVAMTGD 693 (1001)
Q Consensus 663 ~~v~~r~~p~~K~~~v~~l~~~~-~~v~~iGD 693 (1001)
-.+.+-+.|++-.++++.|++.+ .....+|-
T Consensus 276 G~lv~~V~~~~a~~~l~~L~~~~~~~A~iIGe 307 (339)
T COG0309 276 GKLVIAVPPEHAEEVLEALRSHGLKDAAIIGE 307 (339)
T ss_pred ceEEEEECHHHHHHHHHHHHhcCCccceeEEE
Confidence 33666688888889999999988 56666664
No 288
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=20.10 E-value=82 Score=30.66 Aligned_cols=24 Identities=21% Similarity=0.372 Sum_probs=20.4
Q ss_pred cHHHHHHHHHHHhCCcEEEEEcCC
Q 001877 594 REEVKNAMLSCMTAGIRVIVVTGD 617 (1001)
Q Consensus 594 ~~~~~~~I~~l~~~gi~v~~~TGd 617 (1001)
.+++.++|+++++.|.+++|+|.-
T Consensus 31 ~~~v~~~L~~l~~~Gy~IvIvTNQ 54 (159)
T PF08645_consen 31 PPGVPEALRELHKKGYKIVIVTNQ 54 (159)
T ss_dssp -TTHHHHHHHHHHTTEEEEEEEE-
T ss_pred chhHHHHHHHHHhcCCeEEEEeCc
Confidence 457999999999999999999853
No 289
>smart00306 HintN Hint (Hedgehog/Intein) domain N-terminal region. Hedgehog/Intein domain, N-terminal region. Domain has been split to accommodate large insertions of endonucleases.
Probab=20.04 E-value=1e+02 Score=26.76 Aligned_cols=26 Identities=38% Similarity=0.392 Sum_probs=20.4
Q ss_pred EEEEECCeEEEeeCCCCCCCcEEEec
Q 001877 126 ATVLRNGCFSILPAAELVPGDIVEVN 151 (1001)
Q Consensus 126 ~~v~R~g~~~~i~~~~Lv~GDiI~l~ 151 (1001)
..+.++|+.+.+.+++|++||.|.+.
T Consensus 74 ~~~~~~~~~~w~~a~~l~~gd~v~~~ 99 (100)
T smart00306 74 LLVRDGGKLVWVFASELKPGDYVLVP 99 (100)
T ss_pred EEEecCCcEEEEEHHHCCCCCEEEec
Confidence 45556677778999999999998764
Done!