BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001879
(1001 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1QM5|A Chain A, Phosphorylase Recognition And Phosphorylysis Of Its
Oligosaccharide Substrate: Answers To A Long Outstanding
Question
pdb|1QM5|B Chain B, Phosphorylase Recognition And Phosphorylysis Of Its
Oligosaccharide Substrate: Answers To A Long Outstanding
Question
pdb|1E4O|A Chain A, Phosphorylase Recognition And Phosphorolysis Of Its
Oligosaccharide Substrate: Answers To A Long Outstanding
Question
pdb|1E4O|B Chain B, Phosphorylase Recognition And Phosphorolysis Of Its
Oligosaccharide Substrate: Answers To A Long Outstanding
Question
Length = 796
Score = 371 bits (953), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/398 (47%), Positives = 268/398 (67%), Gaps = 14/398 (3%)
Query: 601 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 660
V MANLCVVG AVNGVA +HS++V ++F E+++LWP KF N TNG+TPRRWI+ CNP
Sbjct: 404 VHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPA 463
Query: 661 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 720
L+++L L E W + +L L KFAD+ + Q+R K+ NK+++ F+K +TG +
Sbjct: 464 LAALLDKSLQKE-WANDLDQLINLEKFADDAKFRDQYREIKQANKVRLAEFVKVRTGIEI 522
Query: 721 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 780
+P A+FDIQ+KR+HEYKRQ +N+L I+ YK+++E +R VPRV +FG KA Y
Sbjct: 523 NPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADR----VPRVFLFGAKAAPGY 578
Query: 781 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 840
AK I+ I V +N+DP +GD LKV+F+PDY VS AE LIPA+++S+ ISTAG EA
Sbjct: 579 YLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEA 638
Query: 841 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEI-AGLRKERSEGKF-V 898
SGT NMK A+NG + +GTLDGANVEI ++VGEEN F+FG ++ A L K K+
Sbjct: 639 SGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVEQVKAILAKGYDPVKWRK 698
Query: 899 PDARFEEVKKFVKSGVFG---SYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKV 955
D + V K ++SG + + +D+++ S+ G +G D +LV DF +Y+E Q++V
Sbjct: 699 KDKVLDAVLKELESGKYSDGDKHAFDQMLHSI-GKQG---GDPYLVMADFAAYVEAQKQV 754
Query: 956 DEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIW 993
D Y DQ+ WTR +I+NTA FSSDR+I++Y IW
Sbjct: 755 DVLYRDQEAWTRAAILNTARCGMFSSDRSIRDYQARIW 792
Score = 245 bits (626), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 133/327 (40%), Positives = 181/327 (55%), Gaps = 8/327 (2%)
Query: 143 NVKQAYYLSMEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDXXXXXXXXX 202
N + Y+SMEFL GR N + NLG ++L +L +++ +E D
Sbjct: 57 NQRHVNYISMEFLIGRLTGNNLLNLGWYQDVQDSLKAYDINLTDLLEEEIDPALGNGGLG 116
Query: 203 XXXSCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVS 262
+CFLDSMAT+ A GYGL Y+YGLF+Q Q E +DW PW +
Sbjct: 117 RLAACFLDSMATVGQSATGYGLNYQYGLFRQSFVDGKQVEAPDDWHRSNYPWFRHNEALD 176
Query: 263 YPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLS 322
V GK+ DG+ W I A+D+P+ GY+ LRLW + FDL+
Sbjct: 177 VQVGIGGKVT--KDGR--WEPEFTITGQAWDLPVVGYRNGVAQPLRLWQA-THAHPFDLT 231
Query: 323 AFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRS 382
FN GD +A + NAEK+ +LYP D GK LRL QQY C+ S+ DI+ R
Sbjct: 232 KFNDGDFLRAEQQGINAEKLTKVLYPNDNHTAGKKLRLMQQYFQCACSVADILRRHHL-- 289
Query: 383 GANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVL 442
A E + +Q+NDTHPT+ IPEL+R+LID +SW +AW IT +T AYTNHT++
Sbjct: 290 -AGRKLHELADYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLM 348
Query: 443 PEALEKWSFELMQKLLPRHMEIIEMID 469
PEALE+W +L++ LLPRHM+II I+
Sbjct: 349 PEALERWDVKLVKGLLPRHMQIINEIN 375
>pdb|1L5V|A Chain A, Crystal Structure Of The Maltodextrin Phosphorylase
Complexed With Glucose-1-Phosphate
pdb|1L5V|B Chain B, Crystal Structure Of The Maltodextrin Phosphorylase
Complexed With Glucose-1-Phosphate
pdb|1L5W|A Chain A, Crystal Structure Of The Maltodextrin Phosphorylase
Complexed With The Products Of The Enzymatic Reaction
Between Glucose-1-Phosphate And Maltotetraose
pdb|1L5W|B Chain B, Crystal Structure Of The Maltodextrin Phosphorylase
Complexed With The Products Of The Enzymatic Reaction
Between Glucose-1-Phosphate And Maltotetraose
pdb|1L6I|A Chain A, Crystal Structure Of The Maltodextrin Phosphorylase
Complexed With The Products Of The Enzymatic Reaction
Between Glucose-1-Phosphate And Maltopentaose
pdb|1L6I|B Chain B, Crystal Structure Of The Maltodextrin Phosphorylase
Complexed With The Products Of The Enzymatic Reaction
Between Glucose-1-Phosphate And Maltopentaose
pdb|2ASV|A Chain A, X-Ray Studies On Protein Complexes: Enzymatic Catalysis In
Crystals Of E. Coli Maltodextrin Phosphorylase (Malp)
pdb|2ASV|B Chain B, X-Ray Studies On Protein Complexes: Enzymatic Catalysis In
Crystals Of E. Coli Maltodextrin Phosphorylase (Malp)
pdb|2AV6|A Chain A, X-Ray Studies On Maltodextrin Phosphorylase Complexes:
Recognition Of Substrates And Cathalitic Mechanism Of
Phosphorylase Family
pdb|2AV6|B Chain B, X-Ray Studies On Maltodextrin Phosphorylase Complexes:
Recognition Of Substrates And Cathalitic Mechanism Of
Phosphorylase Family
pdb|2AW3|A Chain A, X-Ray Studies On Maltodextrin Phosphorylase Complexes:
Recognition Of Substrates And Cathalitic Mechanism Of
Phosphorylase Family
pdb|2AW3|B Chain B, X-Ray Studies On Maltodextrin Phosphorylase Complexes:
Recognition Of Substrates And Cathalitic Mechanism Of
Phosphorylase Family
pdb|2AZD|A Chain A, X-Ray Studies On Maltodextrin Phosphorylase (Malp)
Complexes: Recognition Of Substrates And Catalytic
Mechanism Of Phosphorylase Family
pdb|2AZD|B Chain B, X-Ray Studies On Maltodextrin Phosphorylase (Malp)
Complexes: Recognition Of Substrates And Catalytic
Mechanism Of Phosphorylase Family
Length = 796
Score = 371 bits (953), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/398 (47%), Positives = 268/398 (67%), Gaps = 14/398 (3%)
Query: 601 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 660
V MANLCVVG AVNGVA +HS++V ++F E+++LWP KF N TNG+TPRRWI+ CNP
Sbjct: 404 VHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPA 463
Query: 661 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 720
L+++L L E W + +L L KFAD+ + Q+R K+ NK+++ F+K +TG +
Sbjct: 464 LAALLDKSLQKE-WANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEI 522
Query: 721 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 780
+P A+FDIQ+KR+HEYKRQ +N+L I+ YK+++E +R VPRV +FG KA Y
Sbjct: 523 NPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADR----VPRVFLFGAKAAPGY 578
Query: 781 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 840
AK I+ I V +N+DP +GD LKV+F+PDY VS AE LIPA+++S+ ISTAG EA
Sbjct: 579 YLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEA 638
Query: 841 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEI-AGLRKERSEGKF-V 898
SGT NMK A+NG + +GTLDGANVEI ++VGEEN F+FG ++ A L K K+
Sbjct: 639 SGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVEQVKAILAKGYDPVKWRK 698
Query: 899 PDARFEEVKKFVKSGVFG---SYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKV 955
D + V K ++SG + + +D+++ S+ G +G D +LV DF +Y+E Q++V
Sbjct: 699 KDKVLDAVLKELESGKYSDGDKHAFDQMLHSI-GKQG---GDPYLVMADFAAYVEAQKQV 754
Query: 956 DEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIW 993
D Y DQ+ WTR +I+NTA FSSDR+I++Y IW
Sbjct: 755 DVLYRDQEAWTRAAILNTARCGMFSSDRSIRDYQARIW 792
Score = 248 bits (633), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/327 (40%), Positives = 183/327 (55%), Gaps = 8/327 (2%)
Query: 143 NVKQAYYLSMEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDXXXXXXXXX 202
N + Y+SMEFL GR N + NLG ++L +L +++ +E D
Sbjct: 57 NQRHVNYISMEFLIGRLTGNNLLNLGWYQDVQDSLKAYDINLTDLLEEEIDPALGNGGLG 116
Query: 203 XXXSCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVS 262
+CFLDSMAT+ A GYGL Y+YGLF+Q Q E +DW PW +
Sbjct: 117 RLAACFLDSMATVGQSATGYGLNYQYGLFRQSFVDGKQVEAPDDWHRSNYPWFRHNEALD 176
Query: 263 YPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLS 322
V GK+ DG+ W I A+D+P+ GY+ LRLW + FDL+
Sbjct: 177 VQVGIGGKVT--KDGR--WEPEFTITGQAWDLPVVGYRNGVAQPLRLWQA-THAHPFDLT 231
Query: 323 AFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRS 382
FN GD +A + NAEK+ +LYP D + EGK LRL QQY C+ S+ DI+ R
Sbjct: 232 KFNDGDFLRAEQQGINAEKLTKVLYPNDNAFEGKKLRLMQQYFQCACSVADILRRHHL-- 289
Query: 383 GANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVL 442
A E + +Q+NDTHPT+ IPEL+R+LID +SW +AW IT +T AYTNHT++
Sbjct: 290 -AGRKLHELADYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLM 348
Query: 443 PEALEKWSFELMQKLLPRHMEIIEMID 469
PEALE+W +L++ LLPRHM+II I+
Sbjct: 349 PEALERWDVKLVKGLLPRHMQIINEIN 375
>pdb|2ZB2|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Glcose
And 5-
Chloro-N-[4-(1,
2-Dihydroxyethyl)phenyl]-1h-Indole-2-Carboxamide
pdb|2ZB2|B Chain B, Human Liver Glycogen Phosphorylase A Complexed With Glcose
And 5-
Chloro-N-[4-(1,
2-Dihydroxyethyl)phenyl]-1h-Indole-2-Carboxamide
Length = 849
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/402 (47%), Positives = 264/402 (65%), Gaps = 10/402 (2%)
Query: 601 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 660
+ MA+LC+VGSHAVNGVA+IHS+IV +VF +F +L P+KFQNKTNG+TPRRW+ CNP
Sbjct: 442 INMAHLCIVGSHAVNGVAKIHSDIVKTKVFKDFSELEPDKFQNKTNGITPRRWLLLCNPG 501
Query: 661 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 720
L+ ++ +G ED+V + +L +L F ++ + K+ NK+K F++ + +
Sbjct: 502 LAELIAEKIG-EDYVKDLSQLTKLHSFLGDDVFLRELAKVKQENKLKFSQFLETEYKVKI 560
Query: 721 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 780
+P +MFD+QVKRIHEYKRQL+N L ++ Y ++K+ + K FVPR I GGKA Y
Sbjct: 561 NPSSMFDVQVKRIHEYKRQLLNCLHVITMYNRIKK----DPKKLFVPRTVIIGGKAAPGY 616
Query: 781 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 840
AK I+K IT V VN+DP +G LKVIF+ +Y VS+AE +IPA++LS+ ISTAG EA
Sbjct: 617 HMAKMIIKLITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQISTAGTEA 676
Query: 841 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPD 900
SGT NMKF +NG + IGT+DGANVE+ +E GEEN F+FG R ++A L K+ E K +
Sbjct: 677 SGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRIDDVAALDKKGYEAKEYYE 736
Query: 901 A--RFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEA 958
A + V + +G F D + N F D F V D+ +Y++CQ+KV +
Sbjct: 737 ALPELKLVIDQIDNGFFSPKQPDLFKDII--NMLFYH-DRFKVFADYEAYVKCQDKVSQL 793
Query: 959 YCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVEL 1000
Y + K W M + N A S KFSSDRTI+EYA++IWN+ P +L
Sbjct: 794 YMNPKAWNTMVLKNIAASGKFSSDRTIKEYAQNIWNVEPSDL 835
Score = 344 bits (883), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 178/398 (44%), Positives = 243/398 (61%), Gaps = 7/398 (1%)
Query: 88 DTASVASSIQYHAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQA 147
+ A + S H FT + +FA A +VRD L+ W T ++Y K+
Sbjct: 26 NVAELKKSFNRHLHFTLVKDRNVATTRDYYFALAHTVRDHLVGRWIRTQQHYYDKCPKRV 85
Query: 148 YYLSMEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDXXXXXXXXXXXXSC 207
YYLS+EF GR L N + NLGL A EA+ +LG +E + E D +C
Sbjct: 86 YYLSLEFYMGRTLQNTMINLGLQNACDEAIYQLGLDIEELEEIEEDAGLGNGGLGRLAAC 145
Query: 208 FLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKF 267
FLDSMATL A+GYG+RY+YG+F Q+I Q E A+DWL GNPWE R + PV F
Sbjct: 146 FLDSMATLGLAAYGYGIRYEYGIFNQKIRDGWQVEEADDWLRYGNPWEKSRPEFMLPVHF 205
Query: 268 YGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAG 327
YGK+ + G + WI + + A+ YD P+PGY T +RLWS P+ DF+L FN G
Sbjct: 206 YGKVEHTNTG-TKWIDTQVVLALPYDTPVPGYMNNTVNTMRLWSARAPN-DFNLRDFNVG 263
Query: 328 DHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRS----- 382
D+ +A AE I +LYP D EGK LRLKQ+Y + +A+LQDII RF+
Sbjct: 264 DYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKASKFGSTR 323
Query: 383 GANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVL 442
GA ++ FP++VA+Q+NDTHP L IPEL+RI +D++ L W +AW +TQ+T AYTNHTVL
Sbjct: 324 GAGTVFDAFPDQVAIQLNDTHPALAIPELMRIFVDIEKLPWSKAWELTQKTFAYTNHTVL 383
Query: 443 PEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEY 480
PEALE+W +L++KLLPRH+EII I+++ + IV+ +
Sbjct: 384 PEALERWPVDLVEKLLPRHLEIIYEINQKHLDRIVALF 421
>pdb|1Z8D|A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A
With Amp And Glucose
Length = 842
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/400 (45%), Positives = 258/400 (64%), Gaps = 12/400 (3%)
Query: 601 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 660
+ MA+LC+ GSHAVNGVA IHSEI+ +F +FY+L P KFQNKTNG+TPRRW+ CNP
Sbjct: 440 INMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPG 499
Query: 661 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 720
L+ ++ +G ED++++ +L +L F D+E K+ NK+K ++++ + +
Sbjct: 500 LAEVIAERIG-EDFISDLDQLRKLLSFVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHI 558
Query: 721 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 780
+P+++FDIQVKRIHEYKRQL+N L ++ Y ++K E FVPR + GGKA Y
Sbjct: 559 NPNSLFDIQVKRIHEYKRQLLNCLHVITLYNRIKR----EPNKFFVPRTVMIGGKAAPGY 614
Query: 781 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 840
AK I++ +T +G VNHDP +GD L+VIF+ +Y VS+AE +IPA++LS+ ISTAG EA
Sbjct: 615 HMAKMIIRLVTAIGDVVNHDPAVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEA 674
Query: 841 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPD 900
SGT NM F +NG + IGT+DGANVE+ +E GEENFF+FG R ++ L + + D
Sbjct: 675 SGTGNMXFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDKLDQRGYNAQEYYD 734
Query: 901 ARFEEVKKFVK---SGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDE 957
R E+++ ++ SG F D + D F V D+ Y++CQEKV
Sbjct: 735 -RIPELRQVIEQLSSGFFSPKQPDLFKDIV---NMLMHHDRFKVFADYEDYIKCQEKVSA 790
Query: 958 AYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIP 997
Y + + WTRM I N A S KFSSDRTI +YAR+IW + P
Sbjct: 791 LYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEP 830
Score = 344 bits (882), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 173/397 (43%), Positives = 242/397 (60%), Gaps = 8/397 (2%)
Query: 99 HAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGR 158
H FT + P +FA A +VRD L+ W T ++Y + K+ YYLS+EF GR
Sbjct: 35 HLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYMGR 94
Query: 159 ALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDXXXXXXXXXXXXSCFLDSMATLNYP 218
L N + NL L A EA +LG +E + E D +CFLDSMATL
Sbjct: 95 TLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLA 154
Query: 219 AWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGK 278
A+GYG+RY++G+F Q+I+ Q E A+DWL GNPWE R + + PV FYG + S G
Sbjct: 155 AYGYGIRYEFGIFNQKISGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGHVEHTSQG- 213
Query: 279 SHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTN 338
+ W+ + + A+ YD P+PGY+ +RLWS P+ DF+L FN G + +A
Sbjct: 214 AKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAPN-DFNLKDFNVGGYIQAVLDRNL 272
Query: 339 AEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEK-----RSGANVNWEEFPE 393
AE I +LYP D EGK LRLKQ+Y + +A+LQDII RF+ R N++ FP+
Sbjct: 273 AENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTNFDAFPD 332
Query: 394 KVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFEL 453
KVA+Q+NDTHP+L IPEL+RIL+DL+ + W +AW++T RT AYTNHTVLPEALE+W L
Sbjct: 333 KVAIQLNDTHPSLAIPELMRILVDLERMDWDKAWDVTVRTCAYTNHTVLPEALERWPVHL 392
Query: 454 MQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEK 490
++ LLPRH++II I++ ++ + + + D D L +
Sbjct: 393 LETLLPRHLQIIYEINQRFLNRVAAAF-PGDVDRLRR 428
>pdb|1FA9|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Amp
Length = 846
Score = 368 bits (944), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/402 (47%), Positives = 264/402 (65%), Gaps = 10/402 (2%)
Query: 601 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 660
+ MA+LC+VGSHAVNGVA+IHS+IV +VF +F +L P+KFQNKTNG+TPRRW+ CNP
Sbjct: 439 INMAHLCIVGSHAVNGVAKIHSDIVKTKVFKDFSELEPDKFQNKTNGITPRRWLLLCNPG 498
Query: 661 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 720
L+ ++ +G ED+V + +L +L F ++ + K+ NK+K F++ + +
Sbjct: 499 LAELIAEKIG-EDYVKDLSQLTKLHSFLGDDVFLRELAKVKQENKLKFSQFLETEYKVKI 557
Query: 721 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 780
+P +MFD+QVKRIHEYKRQL+N L ++ Y ++K+ + K FVPR I GGKA Y
Sbjct: 558 NPSSMFDVQVKRIHEYKRQLLNCLHVITMYNRIKK----DPKKLFVPRTVIIGGKAAPGY 613
Query: 781 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 840
AK I+K IT V VN+DP +G LKVIF+ +Y VS+AE +IPA++LS+ ISTAG EA
Sbjct: 614 HMAKMIIKLITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQISTAGTEA 673
Query: 841 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPD 900
SGT NMKF +NG + IGT+DGANVE+ +E GEEN F+FG R ++A L K+ E K +
Sbjct: 674 SGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRIDDVAALDKKGYEAKEYYE 733
Query: 901 A--RFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEA 958
A + V + +G F D + N F D F V D+ +Y++CQ+KV +
Sbjct: 734 ALPELKLVIDQIDNGFFSPKQPDLFKDII--NMLFYH-DRFKVFADYEAYVKCQDKVSQL 790
Query: 959 YCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVEL 1000
Y + K W M + N A S KFSSDRTI+EYA++IWN+ P +L
Sbjct: 791 YMNPKAWNTMVLKNIAASGKFSSDRTIKEYAQNIWNVEPSDL 832
Score = 344 bits (883), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 178/398 (44%), Positives = 243/398 (61%), Gaps = 7/398 (1%)
Query: 88 DTASVASSIQYHAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQA 147
+ A + S H FT + +FA A +VRD L+ W T ++Y K+
Sbjct: 23 NVAELKKSFNRHLHFTLVKDRNVATTRDYYFALAHTVRDHLVGRWIRTQQHYYDKCPKRV 82
Query: 148 YYLSMEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDXXXXXXXXXXXXSC 207
YYLS+EF GR L N + NLGL A EA+ +LG +E + E D +C
Sbjct: 83 YYLSLEFYMGRTLQNTMINLGLQNACDEAIYQLGLDIEELEEIEEDAGLGNGGLGRLAAC 142
Query: 208 FLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKF 267
FLDSMATL A+GYG+RY+YG+F Q+I Q E A+DWL GNPWE R + PV F
Sbjct: 143 FLDSMATLGLAAYGYGIRYEYGIFNQKIRDGWQVEEADDWLRYGNPWEKSRPEFMLPVHF 202
Query: 268 YGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAG 327
YGK+ + G + WI + + A+ YD P+PGY T +RLWS P+ DF+L FN G
Sbjct: 203 YGKVEHTNTG-TKWIDTQVVLALPYDTPVPGYMNNTVNTMRLWSARAPN-DFNLRDFNVG 260
Query: 328 DHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRS----- 382
D+ +A AE I +LYP D EGK LRLKQ+Y + +A+LQDII RF+
Sbjct: 261 DYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKASKFGSTR 320
Query: 383 GANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVL 442
GA ++ FP++VA+Q+NDTHP L IPEL+RI +D++ L W +AW +TQ+T AYTNHTVL
Sbjct: 321 GAGTVFDAFPDQVAIQLNDTHPALAIPELMRIFVDIEKLPWSKAWELTQKTFAYTNHTVL 380
Query: 443 PEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEY 480
PEALE+W +L++KLLPRH+EII I+++ + IV+ +
Sbjct: 381 PEALERWPVDLVEKLLPRHLEIIYEINQKHLDRIVALF 418
>pdb|2QLL|A Chain A, Human Liver Glycogen Phosphorylase- Gl Complex
Length = 847
Score = 368 bits (944), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/402 (47%), Positives = 264/402 (65%), Gaps = 10/402 (2%)
Query: 601 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 660
+ MA+LC+VGSHAVNGVA+IHS+IV +VF +F +L P+KFQNKTNG+TPRRW+ CNP
Sbjct: 440 INMAHLCIVGSHAVNGVAKIHSDIVKTKVFKDFSELEPDKFQNKTNGITPRRWLLLCNPG 499
Query: 661 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 720
L+ ++ +G ED+V + +L +L F ++ + K+ NK+K F++ + +
Sbjct: 500 LAELIAEKIG-EDYVKDLSQLTKLHSFLGDDVFLRELAKVKQENKLKFSQFLETEYKVKI 558
Query: 721 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 780
+P +MFD+QVKRIHEYKRQL+N L ++ Y ++K+ + K FVPR I GGKA Y
Sbjct: 559 NPSSMFDVQVKRIHEYKRQLLNCLHVITMYNRIKK----DPKKLFVPRTVIIGGKAAPGY 614
Query: 781 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 840
AK I+K IT V VN+DP +G LKVIF+ +Y VS+AE +IPA++LS+ ISTAG EA
Sbjct: 615 HMAKMIIKLITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQISTAGTEA 674
Query: 841 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPD 900
SGT NMKF +NG + IGT+DGANVE+ +E GEEN F+FG R ++A L K+ E K +
Sbjct: 675 SGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRIDDVAALDKKGYEAKEYYE 734
Query: 901 A--RFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEA 958
A + V + +G F D + N F D F V D+ +Y++CQ+KV +
Sbjct: 735 ALPELKLVIDQIDNGFFSPKQPDLFKDII--NMLFYH-DRFKVFADYEAYVKCQDKVSQL 791
Query: 959 YCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVEL 1000
Y + K W M + N A S KFSSDRTI+EYA++IWN+ P +L
Sbjct: 792 YMNPKAWNTMVLKNIAASGKFSSDRTIKEYAQNIWNVEPSDL 833
Score = 344 bits (882), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 178/398 (44%), Positives = 243/398 (61%), Gaps = 7/398 (1%)
Query: 88 DTASVASSIQYHAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQA 147
+ A + S H FT + +FA A +VRD L+ W T ++Y K+
Sbjct: 24 NVAELKKSFNRHLHFTLVKDRNVATTRDYYFALAHTVRDHLVGRWIRTQQHYYDKCPKRV 83
Query: 148 YYLSMEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDXXXXXXXXXXXXSC 207
YYLS+EF GR L N + NLGL A EA+ +LG +E + E D +C
Sbjct: 84 YYLSLEFYMGRTLQNTMINLGLQNACDEAIYQLGLDIEELEEIEEDAGLGNGGLGRLAAC 143
Query: 208 FLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKF 267
FLDSMATL A+GYG+RY+YG+F Q+I Q E A+DWL GNPWE R + PV F
Sbjct: 144 FLDSMATLGLAAYGYGIRYEYGIFNQKIRDGWQVEEADDWLRYGNPWEKSRPEFMLPVHF 203
Query: 268 YGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAG 327
YGK+ + G + WI + + A+ YD P+PGY T +RLWS P+ DF+L FN G
Sbjct: 204 YGKVEHTNTG-TKWIDTQVVLALPYDTPVPGYMNNTVNTMRLWSARAPN-DFNLRDFNVG 261
Query: 328 DHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRS----- 382
D+ +A AE I +LYP D EGK LRLKQ+Y + +A+LQDII RF+
Sbjct: 262 DYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKASKFGSTR 321
Query: 383 GANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVL 442
GA ++ FP++VA+Q+NDTHP L IPEL+RI +D++ L W +AW +TQ+T AYTNHTVL
Sbjct: 322 GAGTVFDAFPDQVAIQLNDTHPALAIPELMRIFVDIEKLPWSKAWELTQKTFAYTNHTVL 381
Query: 443 PEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEY 480
PEALE+W +L++KLLPRH+EII I+++ + IV+ +
Sbjct: 382 PEALERWPVDLVEKLLPRHLEIIYEINQKHLDRIVALF 419
>pdb|1XOI|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With
Chloroindoloyl Glycine Amide
pdb|1XOI|B Chain B, Human Liver Glycogen Phosphorylase A Complexed With
Chloroindoloyl Glycine Amide
Length = 846
Score = 368 bits (944), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/402 (47%), Positives = 264/402 (65%), Gaps = 10/402 (2%)
Query: 601 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 660
+ MA+LC+VGSHAVNGVA+IHS+IV +VF +F +L P+KFQNKTNG+TPRRW+ CNP
Sbjct: 439 INMAHLCIVGSHAVNGVAKIHSDIVKTKVFKDFSELEPDKFQNKTNGITPRRWLLLCNPG 498
Query: 661 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 720
L+ ++ +G ED+V + +L +L F ++ + K+ NK+K F++ + +
Sbjct: 499 LAELIAEKIG-EDYVKDLSQLTKLHSFLGDDVFLRELAKVKQENKLKFSQFLETEYKVKI 557
Query: 721 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 780
+P +MFD+QVKRIHEYKRQL+N L ++ Y ++K+ + K FVPR I GGKA Y
Sbjct: 558 NPSSMFDVQVKRIHEYKRQLLNCLHVITMYNRIKK----DPKKLFVPRTVIIGGKAAPGY 613
Query: 781 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 840
AK I+K IT V VN+DP +G LKVIF+ +Y VS+AE +IPA++LS+ ISTAG EA
Sbjct: 614 HMAKMIIKLITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQISTAGTEA 673
Query: 841 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPD 900
SGT NMKF +NG + IGT+DGANVE+ +E GEEN F+FG R ++A L K+ E K +
Sbjct: 674 SGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRIDDVAALDKKGYEAKEYYE 733
Query: 901 A--RFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEA 958
A + V + +G F D + N F D F V D+ +Y++CQ+KV +
Sbjct: 734 ALPELKLVIDQIDNGFFSPKQPDLFKDII--NMLFYH-DRFKVFADYEAYVKCQDKVSQL 790
Query: 959 YCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVEL 1000
Y + K W M + N A S KFSSDRTI+EYA++IWN+ P +L
Sbjct: 791 YMNPKAWNTMVLKNIAASGKFSSDRTIKEYAQNIWNVEPSDL 832
Score = 343 bits (881), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 178/398 (44%), Positives = 243/398 (61%), Gaps = 7/398 (1%)
Query: 88 DTASVASSIQYHAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQA 147
+ A + S H FT + +FA A +VRD L+ W T ++Y K+
Sbjct: 23 NVAELKKSFNRHLHFTLVKDRNVATTRDYYFALAHTVRDHLVGRWIRTQQHYYDKCPKRV 82
Query: 148 YYLSMEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDXXXXXXXXXXXXSC 207
YYLS+EF GR L N + NLGL A EA+ +LG +E + E D +C
Sbjct: 83 YYLSLEFYMGRTLQNTMINLGLQNACDEAIYQLGLDIEELEEIEEDAGLGNGGLGRLAAC 142
Query: 208 FLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKF 267
FLDSMATL A+GYG+RY+YG+F Q+I Q E A+DWL GNPWE R + PV F
Sbjct: 143 FLDSMATLGLAAYGYGIRYEYGIFNQKIRDGWQVEEADDWLRYGNPWEKSRPEFMLPVHF 202
Query: 268 YGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAG 327
YGK+ + G + WI + + A+ YD P+PGY T +RLWS P+ DF+L FN G
Sbjct: 203 YGKVEHTNTG-TKWIDTQVVLALPYDTPVPGYMNNTVNTMRLWSARAPN-DFNLRDFNVG 260
Query: 328 DHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRS----- 382
D+ +A AE I +LYP D EGK LRLKQ+Y + +A+LQDII RF+
Sbjct: 261 DYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKASKFGSTR 320
Query: 383 GANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVL 442
GA ++ FP++VA+Q+NDTHP L IPEL+RI +D++ L W +AW +TQ+T AYTNHTVL
Sbjct: 321 GAATVFDAFPDQVAIQLNDTHPALAIPELMRIFVDIEKLPWSKAWELTQKTFAYTNHTVL 380
Query: 443 PEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEY 480
PEALE+W +L++KLLPRH+EII I+++ + IV+ +
Sbjct: 381 PEALERWPVDLVEKLLPRHLEIIYEINQKHLDRIVALF 418
>pdb|1FC0|A Chain A, Human Liver Glycogen Phosphorylase Complexed With
N-Acetyl-Beta-D- Glucopyranosylamine
pdb|1FC0|B Chain B, Human Liver Glycogen Phosphorylase Complexed With
N-Acetyl-Beta-D- Glucopyranosylamine
pdb|2ATI|A Chain A, Glycogen Phosphorylase Inhibitors
pdb|2ATI|B Chain B, Glycogen Phosphorylase Inhibitors
Length = 846
Score = 368 bits (944), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/402 (47%), Positives = 264/402 (65%), Gaps = 10/402 (2%)
Query: 601 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 660
+ MA+LC+VGSHAVNGVA+IHS+IV +VF +F +L P+KFQNKTNG+TPRRW+ CNP
Sbjct: 439 INMAHLCIVGSHAVNGVAKIHSDIVKTKVFKDFSELEPDKFQNKTNGITPRRWLLLCNPG 498
Query: 661 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 720
L+ ++ +G ED+V + +L +L F ++ + K+ NK+K F++ + +
Sbjct: 499 LAELIAEKIG-EDYVKDLSQLTKLHSFLGDDVFLRELAKVKQENKLKFSQFLETEYKVKI 557
Query: 721 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 780
+P +MFD+QVKRIHEYKRQL+N L ++ Y ++K+ + K FVPR I GGKA Y
Sbjct: 558 NPSSMFDVQVKRIHEYKRQLLNCLHVITMYNRIKK----DPKKLFVPRTVIIGGKAAPGY 613
Query: 781 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 840
AK I+K IT V VN+DP +G LKVIF+ +Y VS+AE +IPA++LS+ ISTAG EA
Sbjct: 614 HMAKMIIKLITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQISTAGTEA 673
Query: 841 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPD 900
SGT NMKF +NG + IGT+DGANVE+ +E GEEN F+FG R ++A L K+ E K +
Sbjct: 674 SGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRIDDVAALDKKGYEAKEYYE 733
Query: 901 A--RFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEA 958
A + V + +G F D + N F D F V D+ +Y++CQ+KV +
Sbjct: 734 ALPELKLVIDQIDNGFFSPKQPDLFKDII--NMLFYH-DRFKVFADYEAYVKCQDKVSQL 790
Query: 959 YCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVEL 1000
Y + K W M + N A S KFSSDRTI+EYA++IWN+ P +L
Sbjct: 791 YMNPKAWNTMVLKNIAASGKFSSDRTIKEYAQNIWNVEPSDL 832
Score = 344 bits (883), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 178/398 (44%), Positives = 243/398 (61%), Gaps = 7/398 (1%)
Query: 88 DTASVASSIQYHAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQA 147
+ A + S H FT + +FA A +VRD L+ W T ++Y K+
Sbjct: 23 NVAELKKSFNRHLHFTLVKDRNVATTRDYYFALAHTVRDHLVGRWIRTQQHYYDKCPKRV 82
Query: 148 YYLSMEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDXXXXXXXXXXXXSC 207
YYLS+EF GR L N + NLGL A EA+ +LG +E + E D +C
Sbjct: 83 YYLSLEFYMGRTLQNTMINLGLQNACDEAIYQLGLDIEELEEIEEDAGLGNGGLGRLAAC 142
Query: 208 FLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKF 267
FLDSMATL A+GYG+RY+YG+F Q+I Q E A+DWL GNPWE R + PV F
Sbjct: 143 FLDSMATLGLAAYGYGIRYEYGIFNQKIRDGWQVEEADDWLRYGNPWEKSRPEFMLPVHF 202
Query: 268 YGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAG 327
YGK+ + G + WI + + A+ YD P+PGY T +RLWS P+ DF+L FN G
Sbjct: 203 YGKVEHTNTG-TKWIDTQVVLALPYDTPVPGYMNNTVNTMRLWSARAPN-DFNLRDFNVG 260
Query: 328 DHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRS----- 382
D+ +A AE I +LYP D EGK LRLKQ+Y + +A+LQDII RF+
Sbjct: 261 DYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKASKFGSTR 320
Query: 383 GANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVL 442
GA ++ FP++VA+Q+NDTHP L IPEL+RI +D++ L W +AW +TQ+T AYTNHTVL
Sbjct: 321 GAGTVFDAFPDQVAIQLNDTHPALAIPELMRIFVDIEKLPWSKAWELTQKTFAYTNHTVL 380
Query: 443 PEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEY 480
PEALE+W +L++KLLPRH+EII I+++ + IV+ +
Sbjct: 381 PEALERWPVDLVEKLLPRHLEIIYEINQKHLDRIVALF 418
>pdb|1EM6|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Glcnac
And Cp-526, 423
pdb|1EM6|B Chain B, Human Liver Glycogen Phosphorylase A Complexed With Glcnac
And Cp-526, 423
pdb|1EXV|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Glcnac
And Cp-403, 700
pdb|1EXV|B Chain B, Human Liver Glycogen Phosphorylase A Complexed With Glcnac
And Cp-403, 700
pdb|1L5Q|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With
Caffeine, N- Acetyl-Beta-D-Glucopyranosylamine, And
Cp-403700
pdb|1L5Q|B Chain B, Human Liver Glycogen Phosphorylase A Complexed With
Caffeine, N- Acetyl-Beta-D-Glucopyranosylamine, And
Cp-403700
pdb|1L5R|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With
Riboflavin, N- Acetyl-Beta-D-Glucopyranosylamine And
Cp-403,700
pdb|1L5R|B Chain B, Human Liver Glycogen Phosphorylase A Complexed With
Riboflavin, N- Acetyl-Beta-D-Glucopyranosylamine And
Cp-403,700
pdb|1L5S|A Chain A, Human Liver Glycogen Phosphorylase Complexed With Uric Acid,
N-Acetyl- Beta-D-Glucopyranosylamine, And Cp-403,700
pdb|1L5S|B Chain B, Human Liver Glycogen Phosphorylase Complexed With Uric Acid,
N-Acetyl- Beta-D-Glucopyranosylamine, And Cp-403,700
pdb|1L7X|A Chain A, Human Liver Glycogen Phosphorylase B Complexed With
Caffeine, N- Acetyl-Beta-D-Glucopyranosylamine, And
Cp-403,700
pdb|1L7X|B Chain B, Human Liver Glycogen Phosphorylase B Complexed With
Caffeine, N- Acetyl-Beta-D-Glucopyranosylamine, And
Cp-403,700
Length = 847
Score = 368 bits (944), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/402 (47%), Positives = 264/402 (65%), Gaps = 10/402 (2%)
Query: 601 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 660
+ MA+LC+VGSHAVNGVA+IHS+IV +VF +F +L P+KFQNKTNG+TPRRW+ CNP
Sbjct: 440 INMAHLCIVGSHAVNGVAKIHSDIVKTKVFKDFSELEPDKFQNKTNGITPRRWLLLCNPG 499
Query: 661 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 720
L+ ++ +G ED+V + +L +L F ++ + K+ NK+K F++ + +
Sbjct: 500 LAELIAEKIG-EDYVKDLSQLTKLHSFLGDDVFLRELAKVKQENKLKFSQFLETEYKVKI 558
Query: 721 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 780
+P +MFD+QVKRIHEYKRQL+N L ++ Y ++K+ + K FVPR I GGKA Y
Sbjct: 559 NPSSMFDVQVKRIHEYKRQLLNCLHVITMYNRIKK----DPKKLFVPRTVIIGGKAAPGY 614
Query: 781 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 840
AK I+K IT V VN+DP +G LKVIF+ +Y VS+AE +IPA++LS+ ISTAG EA
Sbjct: 615 HMAKMIIKLITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQISTAGTEA 674
Query: 841 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPD 900
SGT NMKF +NG + IGT+DGANVE+ +E GEEN F+FG R ++A L K+ E K +
Sbjct: 675 SGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRIDDVAALDKKGYEAKEYYE 734
Query: 901 A--RFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEA 958
A + V + +G F D + N F D F V D+ +Y++CQ+KV +
Sbjct: 735 ALPELKLVIDQIDNGFFSPKQPDLFKDII--NMLFYH-DRFKVFADYEAYVKCQDKVSQL 791
Query: 959 YCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVEL 1000
Y + K W M + N A S KFSSDRTI+EYA++IWN+ P +L
Sbjct: 792 YMNPKAWNTMVLKNIAASGKFSSDRTIKEYAQNIWNVEPSDL 833
Score = 344 bits (882), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 178/398 (44%), Positives = 243/398 (61%), Gaps = 7/398 (1%)
Query: 88 DTASVASSIQYHAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQA 147
+ A + S H FT + +FA A +VRD L+ W T ++Y K+
Sbjct: 24 NVAELKKSFNRHLHFTLVKDRNVATTRDYYFALAHTVRDHLVGRWIRTQQHYYDKCPKRV 83
Query: 148 YYLSMEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDXXXXXXXXXXXXSC 207
YYLS+EF GR L N + NLGL A EA+ +LG +E + E D +C
Sbjct: 84 YYLSLEFYMGRTLQNTMINLGLQNACDEAIYQLGLDIEELEEIEEDAGLGNGGLGRLAAC 143
Query: 208 FLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKF 267
FLDSMATL A+GYG+RY+YG+F Q+I Q E A+DWL GNPWE R + PV F
Sbjct: 144 FLDSMATLGLAAYGYGIRYEYGIFNQKIRDGWQVEEADDWLRYGNPWEKSRPEFMLPVHF 203
Query: 268 YGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAG 327
YGK+ + G + WI + + A+ YD P+PGY T +RLWS P+ DF+L FN G
Sbjct: 204 YGKVEHTNTG-TKWIDTQVVLALPYDTPVPGYMNNTVNTMRLWSARAPN-DFNLRDFNVG 261
Query: 328 DHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRS----- 382
D+ +A AE I +LYP D EGK LRLKQ+Y + +A+LQDII RF+
Sbjct: 262 DYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKASKFGSTR 321
Query: 383 GANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVL 442
GA ++ FP++VA+Q+NDTHP L IPEL+RI +D++ L W +AW +TQ+T AYTNHTVL
Sbjct: 322 GAGTVFDAFPDQVAIQLNDTHPALAIPELMRIFVDIEKLPWSKAWELTQKTFAYTNHTVL 381
Query: 443 PEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEY 480
PEALE+W +L++KLLPRH+EII I+++ + IV+ +
Sbjct: 382 PEALERWPVDLVEKLLPRHLEIIYEINQKHLDRIVALF 419
>pdb|3DDS|A Chain A, Crystal Structure Of Glycogen Phosphorylase Complexed With
An Anthranilimide Based Inhibitor Gsk261
pdb|3DDS|B Chain B, Crystal Structure Of Glycogen Phosphorylase Complexed With
An Anthranilimide Based Inhibitor Gsk261
pdb|3DDW|A Chain A, Crystal Structure Of Glycogen Phosphorylase Complexed With
An Anthranilimide Based Inhibitor Gsk055
pdb|3DDW|B Chain B, Crystal Structure Of Glycogen Phosphorylase Complexed With
An Anthranilimide Based Inhibitor Gsk055
pdb|3DD1|A Chain A, Crystal Structure Of Glycogen Phophorylase Complexed With An
Anthranilimide Based Inhibitor Gsk254
pdb|3DD1|B Chain B, Crystal Structure Of Glycogen Phophorylase Complexed With An
Anthranilimide Based Inhibitor Gsk254
Length = 848
Score = 368 bits (944), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/402 (47%), Positives = 264/402 (65%), Gaps = 10/402 (2%)
Query: 601 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 660
+ MA+LC+VGSHAVNGVA+IHS+IV +VF +F +L P+KFQNKTNG+TPRRW+ CNP
Sbjct: 441 INMAHLCIVGSHAVNGVAKIHSDIVKTKVFKDFSELEPDKFQNKTNGITPRRWLLLCNPG 500
Query: 661 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 720
L+ ++ +G ED+V + +L +L F ++ + K+ NK+K F++ + +
Sbjct: 501 LAELIAEKIG-EDYVKDLSQLTKLHSFLGDDVFLRELAKVKQENKLKFSQFLETEYKVKI 559
Query: 721 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 780
+P +MFD+QVKRIHEYKRQL+N L ++ Y ++K+ + K FVPR I GGKA Y
Sbjct: 560 NPSSMFDVQVKRIHEYKRQLLNCLHVITMYNRIKK----DPKKLFVPRTVIIGGKAAPGY 615
Query: 781 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 840
AK I+K IT V VN+DP +G LKVIF+ +Y VS+AE +IPA++LS+ ISTAG EA
Sbjct: 616 HMAKMIIKLITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQISTAGTEA 675
Query: 841 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPD 900
SGT NMKF +NG + IGT+DGANVE+ +E GEEN F+FG R ++A L K+ E K +
Sbjct: 676 SGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRIDDVAALDKKGYEAKEYYE 735
Query: 901 A--RFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEA 958
A + V + +G F D + N F D F V D+ +Y++CQ+KV +
Sbjct: 736 ALPELKLVIDQIDNGFFSPKQPDLFKDII--NMLFYH-DRFKVFADYEAYVKCQDKVSQL 792
Query: 959 YCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVEL 1000
Y + K W M + N A S KFSSDRTI+EYA++IWN+ P +L
Sbjct: 793 YMNPKAWNTMVLKNIAASGKFSSDRTIKEYAQNIWNVEPSDL 834
Score = 344 bits (882), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 178/398 (44%), Positives = 243/398 (61%), Gaps = 7/398 (1%)
Query: 88 DTASVASSIQYHAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQA 147
+ A + S H FT + +FA A +VRD L+ W T ++Y K+
Sbjct: 25 NVAELKKSFNRHLHFTLVKDRNVATTRDYYFALAHTVRDHLVGRWIRTQQHYYDKCPKRV 84
Query: 148 YYLSMEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDXXXXXXXXXXXXSC 207
YYLS+EF GR L N + NLGL A EA+ +LG +E + E D +C
Sbjct: 85 YYLSLEFYMGRTLQNTMINLGLQNACDEAIYQLGLDIEELEEIEEDAGLGNGGLGRLAAC 144
Query: 208 FLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKF 267
FLDSMATL A+GYG+RY+YG+F Q+I Q E A+DWL GNPWE R + PV F
Sbjct: 145 FLDSMATLGLAAYGYGIRYEYGIFNQKIRDGWQVEEADDWLRYGNPWEKSRPEFMLPVHF 204
Query: 268 YGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAG 327
YGK+ + G + WI + + A+ YD P+PGY T +RLWS P+ DF+L FN G
Sbjct: 205 YGKVEHTNTG-TKWIDTQVVLALPYDTPVPGYMNNTVNTMRLWSARAPN-DFNLRDFNVG 262
Query: 328 DHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRS----- 382
D+ +A AE I +LYP D EGK LRLKQ+Y + +A+LQDII RF+
Sbjct: 263 DYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKASKFGSTR 322
Query: 383 GANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVL 442
GA ++ FP++VA+Q+NDTHP L IPEL+RI +D++ L W +AW +TQ+T AYTNHTVL
Sbjct: 323 GAGTVFDAFPDQVAIQLNDTHPALAIPELMRIFVDIEKLPWSKAWELTQKTFAYTNHTVL 382
Query: 443 PEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEY 480
PEALE+W +L++KLLPRH+EII I+++ + IV+ +
Sbjct: 383 PEALERWPVDLVEKLLPRHLEIIYEINQKHLDRIVALF 420
>pdb|3CEH|A Chain A, Human Liver Glycogen Phosphorylase (Tense State) In
Complex With The Allosteric Inhibitor Ave5688
pdb|3CEH|B Chain B, Human Liver Glycogen Phosphorylase (Tense State) In
Complex With The Allosteric Inhibitor Ave5688
pdb|3CEJ|A Chain A, Human Glycogen Phosphorylase (Tense State) In Complex With
The Allosteric Inhibitor Ave2865
pdb|3CEJ|B Chain B, Human Glycogen Phosphorylase (Tense State) In Complex With
The Allosteric Inhibitor Ave2865
pdb|3CEM|A Chain A, Human Glycogen Phosphorylase (Tense State) In Complex With
The Allosteric Inhibitor Ave9423
pdb|3CEM|B Chain B, Human Glycogen Phosphorylase (Tense State) In Complex With
The Allosteric Inhibitor Ave9423
Length = 809
Score = 367 bits (941), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/399 (47%), Positives = 262/399 (65%), Gaps = 10/399 (2%)
Query: 601 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 660
+ MA+LC+VGSHAVNGVA+IHS+IV +VF +F +L P+KFQNKTNG+TPRRW+ CNP
Sbjct: 417 INMAHLCIVGSHAVNGVAKIHSDIVKTKVFKDFSELEPDKFQNKTNGITPRRWLLLCNPG 476
Query: 661 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 720
L+ ++ +G ED+V + +L +L F ++ + K+ NK+K F++ + +
Sbjct: 477 LAELIAEKIG-EDYVKDLSQLTKLHSFLGDDVFLRELAKVKQENKLKFSQFLETEYKVKI 535
Query: 721 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 780
+P +MFD+QVKRIHEYKRQL+N L ++ Y ++K+ + K FVPR I GGKA Y
Sbjct: 536 NPSSMFDVQVKRIHEYKRQLLNCLHVITMYNRIKK----DPKKLFVPRTVIIGGKAAPGY 591
Query: 781 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 840
AK I+K IT V VN+DP +G LKVIF+ +Y VS+AE +IPA++LS+ ISTAG EA
Sbjct: 592 HMAKMIIKLITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQISTAGTEA 651
Query: 841 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPD 900
SGT NMKF +NG + IGT+DGANVE+ +E GEEN F+FG R ++A L K+ E K +
Sbjct: 652 SGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRIDDVAALDKKGYEAKEYYE 711
Query: 901 A--RFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEA 958
A + V + +G F D + N F D F V D+ +Y++CQ+KV +
Sbjct: 712 ALPELKLVIDQIDNGFFSPKQPDLFKDII--NMLFYH-DRFKVFADYEAYVKCQDKVSQL 768
Query: 959 YCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIP 997
Y + K W M + N A S KFSSDRTI+EYA++IWN+ P
Sbjct: 769 YMNPKAWNTMVLKNIAASGKFSSDRTIKEYAQNIWNVEP 807
Score = 344 bits (882), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 178/398 (44%), Positives = 243/398 (61%), Gaps = 7/398 (1%)
Query: 88 DTASVASSIQYHAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQA 147
+ A + S H FT + +FA A +VRD L+ W T ++Y K+
Sbjct: 1 NVAELKKSFNRHLHFTLVKDRNVATTRDYYFALAHTVRDHLVGRWIRTQQHYYDKCPKRV 60
Query: 148 YYLSMEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDXXXXXXXXXXXXSC 207
YYLS+EF GR L N + NLGL A EA+ +LG +E + E D +C
Sbjct: 61 YYLSLEFYMGRTLQNTMINLGLQNACDEAIYQLGLDIEELEEIEEDAGLGNGGLGRLAAC 120
Query: 208 FLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKF 267
FLDSMATL A+GYG+RY+YG+F Q+I Q E A+DWL GNPWE R + PV F
Sbjct: 121 FLDSMATLGLAAYGYGIRYEYGIFNQKIRDGWQVEEADDWLRYGNPWEKSRPEFMLPVHF 180
Query: 268 YGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAG 327
YGK+ + G + WI + + A+ YD P+PGY T +RLWS P+ DF+L FN G
Sbjct: 181 YGKVEHTNTG-TKWIDTQVVLALPYDTPVPGYMNNTVNTMRLWSARAPN-DFNLRDFNVG 238
Query: 328 DHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRS----- 382
D+ +A AE I +LYP D EGK LRLKQ+Y + +A+LQDII RF+
Sbjct: 239 DYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKASKFGSTR 298
Query: 383 GANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVL 442
GA ++ FP++VA+Q+NDTHP L IPEL+RI +D++ L W +AW +TQ+T AYTNHTVL
Sbjct: 299 GAGTVFDAFPDQVAIQLNDTHPALAIPELMRIFVDIEKLPWSKAWELTQKTFAYTNHTVL 358
Query: 443 PEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEY 480
PEALE+W +L++KLLPRH+EII I+++ + IV+ +
Sbjct: 359 PEALERWPVDLVEKLLPRHLEIIYEINQKHLDRIVALF 396
>pdb|2ECP|A Chain A, The Crystal Structure Of The E. Coli Maltodextrin
Phosphorylase Complex
pdb|2ECP|B Chain B, The Crystal Structure Of The E. Coli Maltodextrin
Phosphorylase Complex
Length = 796
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/398 (47%), Positives = 266/398 (66%), Gaps = 14/398 (3%)
Query: 601 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 660
V MANLCVVG AVNGVA +HS++V ++F E+++LWP KF N TNG+TPRRWI+ CNP
Sbjct: 404 VHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPA 463
Query: 661 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 720
L+++L L E W + +L L K AD+ + +R K+ NK+++ F+K +TG +
Sbjct: 464 LAALLDKSLQKE-WANDLDQLINLVKLADDAKFRDLYRVIKQANKVRLAEFVKVRTGIDI 522
Query: 721 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 780
+P A+FDIQ+KR+HEYKRQ +N+L I+ YK+++E +R VPRV +FG KA Y
Sbjct: 523 NPQAIFDIQIKRLHEYKRQHLNLLRILALYKEIRENPQADR----VPRVFLFGAKAAPGY 578
Query: 781 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 840
AK I+ I V +N+DP +GD LKV+F+PDY VS AE LIPA+++S+ ISTAG EA
Sbjct: 579 YLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEA 638
Query: 841 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEI-AGLRKERSEGKF-V 898
SGT NMK A+NG + +GTLDGANVEI ++VGEEN F+FG ++ A L K K+
Sbjct: 639 SGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVKQVKAILAKGYDPVKWRK 698
Query: 899 PDARFEEVKKFVKSGVFG---SYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKV 955
D + V K ++SG + + +D+++ S+ G +G D +LV DF +Y+E Q++V
Sbjct: 699 KDKVLDAVLKELESGKYSDGDKHAFDQMLHSI-GKQG---GDPYLVMADFAAYVEAQKQV 754
Query: 956 DEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIW 993
D Y DQ+ WTR +I+NTA FSSDR+I++Y IW
Sbjct: 755 DVLYRDQEAWTRAAILNTARCGMFSSDRSIRDYQARIW 792
Score = 243 bits (619), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 132/327 (40%), Positives = 180/327 (55%), Gaps = 8/327 (2%)
Query: 143 NVKQAYYLSMEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDXXXXXXXXX 202
N + Y+SMEFL GR N + NLG ++L +L +++ +E D
Sbjct: 57 NQRHVNYISMEFLIGRLTGNNLLNLGWYQDVQDSLKAYDINLTDLLEEEIDPALGNGGLG 116
Query: 203 XXXSCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVS 262
+CFLDSMAT+ A GYGL Y+YGLF+Q Q E +DW PW +
Sbjct: 117 RLAACFLDSMATVGQSATGYGLNYQYGLFRQSFVDGKQVEAPDDWHRSNYPWFRHNEALD 176
Query: 263 YPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLS 322
V G + DG+ W I A+D+P+ GY+ LRLW + FDL+
Sbjct: 177 VQVGIGGAVT--KDGR--WEPEFTITGQAWDLPVVGYRNGVAQPLRLWQA-THAHPFDLT 231
Query: 323 AFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRS 382
FN GD +A + NAEK+ +LYP D GK LRL QQY C+ S+ DI+ R
Sbjct: 232 KFNDGDFLRAEQQGINAEKLTKVLYPNDNHTAGKKLRLMQQYFQCACSVADILRRHHL-- 289
Query: 383 GANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVL 442
A E + +Q+NDTHPT+ IPEL+R+LID +SW +AW IT +T AYTNHT++
Sbjct: 290 -AGRELHELADYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLM 348
Query: 443 PEALEKWSFELMQKLLPRHMEIIEMID 469
PEALE+W +L++ LLPRHM+II I+
Sbjct: 349 PEALERWDVKLVKGLLPRHMQIINEIN 375
>pdb|1AHP|A Chain A, Oligosaccharide Substrate Binding In Escherichia Coli
Maltodextrin Phsphorylase
pdb|1AHP|B Chain B, Oligosaccharide Substrate Binding In Escherichia Coli
Maltodextrin Phsphorylase
Length = 797
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/398 (47%), Positives = 266/398 (66%), Gaps = 14/398 (3%)
Query: 601 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 660
V MANLCVVG AVNGVA +HS++V ++F E+++LWP KF N TNG+TPRRWI+ CNP
Sbjct: 405 VHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPA 464
Query: 661 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 720
L+++L L E W + +L L K AD+ + +R K+ NK+++ F+K +TG +
Sbjct: 465 LAALLDKSLQKE-WANDLDQLINLVKLADDAKFRDLYRVIKQANKVRLAEFVKVRTGIDI 523
Query: 721 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 780
+P A+FDIQ+KR+HEYKRQ +N+L I+ YK+++E +R VPRV +FG KA Y
Sbjct: 524 NPQAIFDIQIKRLHEYKRQHLNLLRILALYKEIRENPQADR----VPRVFLFGAKAAPGY 579
Query: 781 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 840
AK I+ I V +N+DP +GD LKV+F+PDY VS AE LIPA+++S+ ISTAG EA
Sbjct: 580 YLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEA 639
Query: 841 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEI-AGLRKERSEGKF-V 898
SGT NMK A+NG + +GTLDGANVEI ++VGEEN F+FG ++ A L K K+
Sbjct: 640 SGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVKQVKAILAKGYDPVKWRK 699
Query: 899 PDARFEEVKKFVKSGVFG---SYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKV 955
D + V K ++SG + + +D+++ S+ G +G D +LV DF +Y+E Q++V
Sbjct: 700 KDKVLDAVLKELESGKYSDGDKHAFDQMLHSI-GKQG---GDPYLVMADFAAYVEAQKQV 755
Query: 956 DEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIW 993
D Y DQ+ WTR +I+NTA FSSDR+I++Y IW
Sbjct: 756 DVLYRDQEAWTRAAILNTARCGMFSSDRSIRDYQARIW 793
Score = 243 bits (619), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 132/327 (40%), Positives = 180/327 (55%), Gaps = 8/327 (2%)
Query: 143 NVKQAYYLSMEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDXXXXXXXXX 202
N + Y+SMEFL GR N + NLG ++L +L +++ +E D
Sbjct: 58 NQRHVNYISMEFLIGRLTGNNLLNLGWYQDVQDSLKAYDINLTDLLEEEIDPALGAGGLG 117
Query: 203 XXXSCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVS 262
+CFLDSMAT+ A GYGL Y+YGLF+Q Q E +DW PW +
Sbjct: 118 RLAACFLDSMATVGQSATGYGLNYQYGLFRQSFVDGKQVEAPDDWHRSNYPWFRHNEALD 177
Query: 263 YPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLS 322
V G + DG+ W I A+D+P+ GY+ LRLW + FDL+
Sbjct: 178 VQVGIGGAVT--KDGR--WEPEFTITGQAWDLPVVGYRNGVAQPLRLWQA-THAHPFDLT 232
Query: 323 AFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRS 382
FN GD +A + NAEK+ +LYP D GK LRL QQY C+ S+ DI+ R
Sbjct: 233 KFNDGDFLRAEQQGINAEKLTKVLYPNDNHTAGKKLRLMQQYFQCACSVADILRRHHL-- 290
Query: 383 GANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVL 442
A E + +Q+NDTHPT+ IPEL+R+LID +SW +AW IT +T AYTNHT++
Sbjct: 291 -AGRELHELADYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLM 349
Query: 443 PEALEKWSFELMQKLLPRHMEIIEMID 469
PEALE+W +L++ LLPRHM+II I+
Sbjct: 350 PEALERWDVKLVKGLLPRHMQIINEIN 376
>pdb|7GPB|A Chain A, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
pdb|7GPB|B Chain B, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
pdb|7GPB|C Chain C, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
pdb|7GPB|D Chain D, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
pdb|9GPB|A Chain A, The Allosteric Transition Of Glycogen Phosphorylase
pdb|9GPB|B Chain B, The Allosteric Transition Of Glycogen Phosphorylase
pdb|9GPB|C Chain C, The Allosteric Transition Of Glycogen Phosphorylase
pdb|9GPB|D Chain D, The Allosteric Transition Of Glycogen Phosphorylase
pdb|1B4D|A Chain A, Amidocarbamate Inhibitor Of Glycogen Phosphorylase
pdb|1BX3|A Chain A, Effects Of Commonly Used Cryoprotectants On Glycogen
Phosphorylase Activity And Structure
pdb|2PRI|A Chain A, Binding Of 2-Deoxy-Glucose-6-Phosphate To Glycogen
Phosphorylase B
pdb|2PRJ|A Chain A, Binding Of N-Acetyl-Beta-D-Glucopyranosylamine To Glycogen
Phosphorylase B
pdb|2SKC|A Chain A, Pyridoxal Phosphorylase B In Complex With Fluorophosphate,
Glucose And Inosine-5'-Monophosphate
pdb|2SKD|A Chain A, Pyridoxal Phosphorylase B In Complex With Phosphate,
Glucose And Inosine-5'-Monophosphate
pdb|2SKE|A Chain A, Pyridoxal Phosphorylase B In Complex With Phosphite,
Glucose And Inosine-5'-monophosphate
pdb|1C8K|A Chain A, Flavopiridol Inhibits Glycogen Phosphorylase By Binding At
The Inhibitor Site
pdb|1GFZ|A Chain A, Flavopiridol Inhibits Glycogen Phosphorylase By Binding At
The Inhibitor Site
pdb|1GG8|A Chain A, Design Of Inhibitors Of Glycogen Phosphorylase: A Study Of
Alpha-And Beta-C-Glucosides And 1-Thio-Beta-D-Glucose
Compounds
pdb|1FS4|A Chain A, Structures Of Glycogen Phosphorylase-Inhibitor Complexes
And The Implications For Structure-Based Drug Design
pdb|1FTQ|A Chain A, Structures Of Glycogen Phosphorylase-Inhibitor Complexes
And The Implications For Structure-Based Drug Design
pdb|1FTW|A Chain A, Structures Of Glycogen Phosphorylase-Inhibitor Complexes
And The Implications For Structure-Based Drug Design
pdb|1FTY|A Chain A, Structures Of Glycogen Phosphorylase-Inhibitor Complexes
And The Implications For Structure-Based Drug Design
pdb|1FU4|A Chain A, Structures Of Glycogen Phosphorylase-Inhibitor Complexes
And The Implications For Structure-Based Drug Design
pdb|1FU7|A Chain A, Structures Of Glycogen Phosphorylase-Inhibitor Complexes
And The Implications For Structure-Based Drug Design
pdb|1FU8|A Chain A, Structures Of Glycogen Phosphorylase-Inhibitor Complexes
And The Implications For Structure-Based Drug Design
pdb|1GGN|A Chain A, Structures Of Glycogen Phosphorylase-Inhibitor Complexes
And The Implications For Structure-Based Drug Design
pdb|1HLF|A Chain A, Binding Of Glucopyranosylidene-Spiro-Thiohydantoin To
Glycogen Phosphorylase B: Kinetic And Crystallographic
Stud
pdb|1H5U|A Chain A, The 1.76 A Resolution Crystal Structure Of Glycogen
Phosphorylase B Complexed With Glucose And Cp320626, A
Potential Antidiabetic Drug
pdb|1K06|A Chain A, Crystallographic Binding Study Of 100 Mm
N-Benzoyl-N'-Beta-D- Glucopyranosyl Urea To Glycogen
Phosphorylase B
pdb|1K08|A Chain A, Crystallographic Binding Study Of 10 Mm
N-Benzoyl-N'-Beta-D- Glucopyranosyl Urea To Glycogen
Phosphorylase B
pdb|1KTI|A Chain A, Binding Of 100 Mm N-Acetyl-N'-Beta-D-Glucopyranosyl Urea
To Glycogen Phosphorylase B: Kinetic And
Crystallographic Studies
pdb|1P29|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With Maltopentaose
pdb|1P2B|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With Maltoheptaose
pdb|1P2D|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With Beta Cyclodextrin
pdb|1P2G|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With Gamma Cyclodextrin
pdb|1P4G|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With C-(1- Azido-Alpha-D-Glucopyranosyl)formamide
pdb|1P4H|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With C-(1- Acetamido-alpha-d-glucopyranosyl) Formamide
pdb|1P4J|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With C-(1- Hydroxy-Beta-D-Glucopyranosyl)formamide
pdb|1WUT|A Chain A, Acyl Ureas As Human Liver Glycogen Phosphorylase
Inhibitors For The Treatment Of Type 2 Diabetes
pdb|1WUY|A Chain A, Crystallographic Studies On Acyl Ureas, A New Class Of
Inhibitors Of Glycogen Phosphorylase. Broad Specificity
Of The Allosteric Site
pdb|1WV0|A Chain A, Crystallographic Studies On Acyl Ureas, A New Class Of
Inhibitors Of Glycogen Phosphorylase. Broad Specificity
Of The Allosteric Site
pdb|1WV1|A Chain A, Crystallographic Studies On Acyl Ureas, A New Class Of
Inhibitors Of Glycogenphosphorylase. Broad Specificity
Of The Allosteric Site
pdb|1WW2|A Chain A, Crystallographic Studies On Two Bioisosteric Analogues,
N-Acetyl-Beta- D-Glucopyranosylamine And
N-Trifluoroacetyl-Beta-D- Glucopyranosylamine, Potent
Inhibitors Of Muscle Glycogen Phosphorylase
pdb|1WW3|A Chain A, Crystallographic Studies On Two Bioisosteric Analogues,
N-Acetyl-Beta- D-Glucopyranosylamine And
N-Trifluoroacetyl-Beta-D- Glucopyranosylamine, Potent
Inhibitors Of Muscle Glycogen Phosphorylase
pdb|2IEG|A Chain A, Crystal Structure Of Rabbit Muscle Glycogen Phosphorylase
In Complex With 3,4-Dihydro-2-Quinolone
pdb|2IEG|B Chain B, Crystal Structure Of Rabbit Muscle Glycogen Phosphorylase
In Complex With 3,4-Dihydro-2-Quinolone
pdb|2IEI|A Chain A, Crystal Structure Of Rabbit Muscle Glycogen Phosphorylase
In Complex With 3,4-Dihydro-2-Quinolone
pdb|2IEI|B Chain B, Crystal Structure Of Rabbit Muscle Glycogen Phosphorylase
In Complex With 3,4-Dihydro-2-Quinolone
pdb|1GPB|A Chain A, Glycogen Phosphorylase B: Description Of The Protein
Structure
pdb|2GPB|A Chain A, Comparison Of The Binding Of Glucose And
Glucose-1-Phosphate Derivatives To T-State Glycogen
Phosphorylase B
pdb|3GPB|A Chain A, Comparison Of The Binding Of Glucose And
Glucose-1-Phosphate Derivatives To T-State Glycogen
Phosphorylase B
pdb|4GPB|A Chain A, Comparison Of The Binding Of Glucose And
Glucose-1-Phosphate Derivatives To T-State Glycogen
Phosphorylase B
pdb|5GPB|A Chain A, Comparison Of The Binding Of Glucose And
Glucose-1-Phosphate Derivatives To T-State Glycogen
Phosphorylase B
pdb|6GPB|A Chain A, Refined Crystal Structure Of The Phosphorylase-Heptulose
2-Phosphate- Oligosaccharide-Amp Complex
pdb|8GPB|A Chain A, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
pdb|2QN7|A Chain A, Glycogen Phosphorylase B In Complex With
N-4-Hydroxybenzoyl-N'-4-Beta- D-Glucopyranosyl Urea
pdb|2QN8|A Chain A, Glycogen Phosphorylase B In Complex With
N-4-nitrobenzoyl-n'-beta-d- Glucopyranosyl Urea
pdb|2QN9|A Chain A, Glycogen Phosphorylase In Complex With
N-4-Aminobenzoyl-N'-Beta-D- Glucopyranosyl Urea
Length = 842
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/400 (45%), Positives = 259/400 (64%), Gaps = 12/400 (3%)
Query: 601 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 660
+ MA+LC+ GSHAVNGVA IHSEI+ +F +FY+L P KFQNKTNG+TPRRW+ CNP
Sbjct: 439 INMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPG 498
Query: 661 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 720
L+ I+ +G E+++++ +L +L + D+E K+ NK+K ++++ + +
Sbjct: 499 LAEIIAERIG-EEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHI 557
Query: 721 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 780
+P+++FD+QVKRIHEYKRQL+N L ++ Y ++K+ E VPR + GGKA Y
Sbjct: 558 NPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKK----EPNKFVVPRTVMIGGKAAPGY 613
Query: 781 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 840
AK I+K IT +G VNHDP +GD L+VIF+ +Y VS+AE +IPA++LS+ ISTAG EA
Sbjct: 614 HMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEA 673
Query: 841 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPD 900
SGT NMKF +NG + IGT+DGANVE+ +E GEENFF+FG R ++ L + + D
Sbjct: 674 SGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYD 733
Query: 901 ARFEEVKKFVK---SGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDE 957
R E+++ ++ SG F D + D F V D+ Y++CQE+V
Sbjct: 734 -RIPELRQIIEQLSSGFFSPKQPDLFKDIV---NMLMHHDRFKVFADYEEYVKCQERVSA 789
Query: 958 AYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIP 997
Y + + WTRM I N A S KFSSDRTI +YAR+IW + P
Sbjct: 790 LYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEP 829
Score = 341 bits (874), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 171/397 (43%), Positives = 241/397 (60%), Gaps = 8/397 (2%)
Query: 99 HAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGR 158
H FT + P +FA A +VRD L+ W T ++Y + K+ YYLS+EF GR
Sbjct: 34 HLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYMGR 93
Query: 159 ALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDXXXXXXXXXXXXSCFLDSMATLNYP 218
L N + NL L A EA +LG +E + E D +CFLDSMATL
Sbjct: 94 TLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLA 153
Query: 219 AWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGK 278
A+GYG+RY++G+F Q+I Q E A+DWL GNPWE R + + PV FYG++ S G
Sbjct: 154 AYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQG- 212
Query: 279 SHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTN 338
+ W+ + + A+ YD P+PGY+ +RLWS P+ DF+L FN G + +A
Sbjct: 213 AKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAPN-DFNLKDFNVGGYIQAVLDRNL 271
Query: 339 AEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEK-----RSGANVNWEEFPE 393
AE I +LYP D EGK LRLKQ+Y + +A+LQDII RF+ R N++ FP+
Sbjct: 272 AENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTNFDAFPD 331
Query: 394 KVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFEL 453
KVA+Q+NDTHP+L IPEL+R+L+DL+ L W +AW +T +T AYTNHTV+PEALE+W L
Sbjct: 332 KVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVIPEALERWPVHL 391
Query: 454 MQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEK 490
++ LLPRH++II I++ ++ + + + D D L +
Sbjct: 392 LETLLPRHLQIIYEINQRFLNRVAAAF-PGDVDRLRR 427
>pdb|1PYG|A Chain A, Structural Basis For The Activation Of Glycogen
Phosphorylase B By Adenosine Monophosphate
pdb|1PYG|B Chain B, Structural Basis For The Activation Of Glycogen
Phosphorylase B By Adenosine Monophosphate
pdb|1PYG|C Chain C, Structural Basis For The Activation Of Glycogen
Phosphorylase B By Adenosine Monophosphate
pdb|1PYG|D Chain D, Structural Basis For The Activation Of Glycogen
Phosphorylase B By Adenosine Monophosphate
pdb|2AMV|A Chain A, The Structure Of Glycogen Phosphorylase B With An Alkyl-
Dihydropyridine-Dicarboxylic Acid
pdb|1E1Y|A Chain A, Flavopiridol Inhibits Glycogen Phosphorylase By Binding At
The Inhibitor Site
pdb|1UZU|A Chain A, Glycogen Phosphorylase B In Complex With Indirubin-5'-
Sulphonate
pdb|1XC7|A Chain A, Binding Of Beta-D-Glucopyranosyl Bismethoxyphosphoramidate
To Glycogen Phosphorylase B: Kinetic And
Crystallographic Studies
pdb|1XKX|A Chain A, Kinetic And Crystallographic Studies On
2-(Beta-D-Glucopyranosyl)-5-
Methyl-1,3,4-Oxadiazole,-Benzothiazole,
And-Benzimidazole, Inhibitors Of Muscle Glycogen
Phosphorylase B. Evidence For A New Binding Site.
pdb|1XL0|A Chain A, Kinetic And Crystallographic Studies On
2-(Beta-D-Glucopyranosyl)-5-
Methyl-1,3,4-Oxadiazole,-Benzothiazole,
And-Benzimidazole, Inhibitors Of Muscle Glycogen
Phosphorylase B. Evidence For A New Binding Site.
pdb|1XL1|A Chain A, Kinetic And Crystallographic Studies On
2-(Beta-D-Glucopyranosyl)-5-
Methyl-1,3,4-Oxadiazole,-Benzothiazole,
And-Benzimidazole, Inhibitors Of Muscle Glycogen
Phosphorylase B. Evidence For A New Binding Site.
pdb|1Z62|A Chain A, Indirubin-3'-aminooxy-acetate Inhibits Glycogen
Phosphorylase By Binding At The Inhibitor And The
Allosteric Site. Broad Specificities Of The Two Sites
pdb|2F3P|A Chain A, Crystal Structure Of The Glycogen Phosphorylase B
N-(Beta-D- Glucopyranosyl)oxamic Acid Complex
pdb|2F3Q|A Chain A, Crystal Structure Of The Glycogen Phosphorylase B
METHYL-N-(Beta-D- Glucopyranosyl)oxamate Complex
pdb|2F3S|A Chain A, Crystal Structure Of The Glycogen Phosphorylase B
ETHYL-N- (Beta-D-Glucopyranosyl)oxamate Complex
pdb|2F3U|A Chain A, Crystal Structure Of The Glycogen Phosphorylase B
N-(Beta-D- Glucopyranosyl)-N'-Cyclopropyl Oxalamide
Complex
pdb|2FET|A Chain A, Synthesis Of C-D-Glycopyranosyl-Hydroquinones
And-Benzoquinones. Inhibition Of Ptp1b. Inhibition Of
And Binding To Glycogen Phosphorylase In The Crystal
pdb|2FF5|A Chain A, Synthesis Of C-D-Glycopyranosyl-Hydroquinones
And-Benzoquinones. Inhibition Of Ptp1b. Inhibition Of
And Binding To Glycogen Phosphorylase In The Crystal
pdb|1AXR|A Chain A, Cooperativity Between Hydrogen-Bonding And Charge-Dipole
Interactions In The Inhibition Of Beta-Glycosidases By
Azolopyridines: Evidence From A Study With Glycogen
Phosphorylase B
pdb|1GPY|A Chain A, Crystallographic Binding Studies On The Allosteric
Inhibitor Glucose- 6-Phosphate To T State Glycogen
Phosphorylase B
pdb|3BD7|A Chain A, Glycogen Phosphorylase Complex With 1(-D-Glucopyranosyl)
Thymine
pdb|3BD8|A Chain A, Glucogen Phosphorylase Complex With 1(-D-Glucopyranosyl)
Cytosine
pdb|3BDA|A Chain A, Glycogen Phosphorylase Complex With 1(-D-Glucopyranosyl)
Cyanuric Acid
Length = 842
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/400 (45%), Positives = 259/400 (64%), Gaps = 12/400 (3%)
Query: 601 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 660
+ MA+LC+ GSHAVNGVA IHSEI+ +F +FY+L P KFQNKTNG+TPRRW+ CNP
Sbjct: 439 INMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPG 498
Query: 661 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 720
L+ I+ +G E+++++ +L +L + D+E K+ NK+K ++++ + +
Sbjct: 499 LAEIIAERIG-EEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHI 557
Query: 721 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 780
+P+++FD+QVKRIHEYKRQL+N L ++ Y ++K+ E VPR + GGKA Y
Sbjct: 558 NPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKK----EPNKFVVPRTVMIGGKAAPGY 613
Query: 781 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 840
AK I+K IT +G VNHDP +GD L+VIF+ +Y VS+AE +IPA++LS+ ISTAG EA
Sbjct: 614 HMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEA 673
Query: 841 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPD 900
SGT NMKF +NG + IGT+DGANVE+ +E GEENFF+FG R ++ L + + D
Sbjct: 674 SGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYD 733
Query: 901 ARFEEVKKFVK---SGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDE 957
R E+++ ++ SG F D + D F V D+ Y++CQE+V
Sbjct: 734 -RIPELRQIIEQLSSGFFSPKQPDLFKDIV---NMLMHHDRFKVFADYEEYVKCQERVSA 789
Query: 958 AYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIP 997
Y + + WTRM I N A S KFSSDRTI +YAR+IW + P
Sbjct: 790 LYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEP 829
Score = 342 bits (877), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 172/397 (43%), Positives = 241/397 (60%), Gaps = 8/397 (2%)
Query: 99 HAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGR 158
H FT + P +FA A +VRD L+ W T ++Y + K+ YYLS+EF GR
Sbjct: 34 HLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYMGR 93
Query: 159 ALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDXXXXXXXXXXXXSCFLDSMATLNYP 218
L N + NL L A EA +LG +E + E D +CFLDSMATL
Sbjct: 94 TLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLA 153
Query: 219 AWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGK 278
A+GYG+RY++G+F Q+I Q E A+DWL GNPWE R + + PV FYG++ S G
Sbjct: 154 AYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQG- 212
Query: 279 SHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTN 338
+ W+ + + A+ YD P+PGY+ +RLWS P+ DF+L FN G + +A
Sbjct: 213 AKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAPN-DFNLKDFNVGGYIQAVLDRNL 271
Query: 339 AEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEK-----RSGANVNWEEFPE 393
AE I +LYP D EGK LRLKQ+Y + +A+LQDII RF+ R N++ FP+
Sbjct: 272 AENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTNFDAFPD 331
Query: 394 KVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFEL 453
KVA+Q+NDTHP+L IPEL+R+L+DL+ L W +AW +T +T AYTNHTVLPEALE+W L
Sbjct: 332 KVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHL 391
Query: 454 MQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEK 490
++ LLPRH++II I++ ++ + + + D D L +
Sbjct: 392 LETLLPRHLQIIYEINQRFLNRVAAAF-PGDVDRLRR 427
>pdb|1C8L|A Chain A, Synergistic Inhibition Of Glycogen Phosphorylase A By A
Potential Antidiabetic Drug And Caffeine
pdb|1LWN|A Chain A, Crystal Structure Of Rabbit Muscle Glycogen Phosphorylase
A In Complex With A Potential Hypoglycaemic Drug At 2.0
A Resolution
pdb|1LWO|A Chain A, Crystal Structure Of Rabbit Muscle Glycogen Phosphorylase
A In Complex With A Potential Hypoglycaemic Drug At 2.0
A Resolution
pdb|3AMV|A Chain A, Allosteric Inhibition Of Glycogen Phosphorylase A By A
Potential Antidiabetic Drug
pdb|2GPA|A Chain A, Allosteric Inhibition Of Glycogen Phosphorylase A By A
Potential Antidiabetic Drug
Length = 842
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/400 (45%), Positives = 259/400 (64%), Gaps = 12/400 (3%)
Query: 601 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 660
+ MA+LC+ GSHAVNGVA IHSEI+ +F +FY+L P KFQNKTNG+TPRRW+ CNP
Sbjct: 439 INMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPG 498
Query: 661 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 720
L+ I+ +G E+++++ +L +L + D+E K+ NK+K ++++ + +
Sbjct: 499 LAEIIAERIG-EEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHI 557
Query: 721 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 780
+P+++FD+QVKRIHEYKRQL+N L ++ Y ++K+ E VPR + GGKA Y
Sbjct: 558 NPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKK----EPNKFVVPRTVMIGGKAAPGY 613
Query: 781 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 840
AK I+K IT +G VNHDP +GD L+VIF+ +Y VS+AE +IPA++LS+ ISTAG EA
Sbjct: 614 HMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEA 673
Query: 841 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPD 900
SGT NMKF +NG + IGT+DGANVE+ +E GEENFF+FG R ++ L + + D
Sbjct: 674 SGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYD 733
Query: 901 ARFEEVKKFVK---SGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDE 957
R E+++ ++ SG F D + D F V D+ Y++CQE+V
Sbjct: 734 -RIPELRQIIEQLSSGFFSPKQPDLFKDIV---NMLMHHDRFKVFADYEEYVKCQERVSA 789
Query: 958 AYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIP 997
Y + + WTRM I N A S KFSSDRTI +YAR+IW + P
Sbjct: 790 LYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEP 829
Score = 342 bits (877), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 172/397 (43%), Positives = 241/397 (60%), Gaps = 8/397 (2%)
Query: 99 HAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGR 158
H FT + P +FA A +VRD L+ W T ++Y + K+ YYLS+EF GR
Sbjct: 34 HLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYMGR 93
Query: 159 ALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDXXXXXXXXXXXXSCFLDSMATLNYP 218
L N + NL L A EA +LG +E + E D +CFLDSMATL
Sbjct: 94 TLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLA 153
Query: 219 AWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGK 278
A+GYG+RY++G+F Q+I Q E A+DWL GNPWE R + + PV FYG++ S G
Sbjct: 154 AYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQG- 212
Query: 279 SHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTN 338
+ W+ + + A+ YD P+PGY+ +RLWS P+ DF+L FN G + +A
Sbjct: 213 AKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAPN-DFNLKDFNVGGYIQAVLDRNL 271
Query: 339 AEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEK-----RSGANVNWEEFPE 393
AE I +LYP D EGK LRLKQ+Y + +A+LQDII RF+ R N++ FP+
Sbjct: 272 AENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTNFDAFPD 331
Query: 394 KVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFEL 453
KVA+Q+NDTHP+L IPEL+R+L+DL+ L W +AW +T +T AYTNHTVLPEALE+W L
Sbjct: 332 KVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHL 391
Query: 454 MQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEK 490
++ LLPRH++II I++ ++ + + + D D L +
Sbjct: 392 LETLLPRHLQIIYEINQRFLNRVAAAF-PGDVDRLRR 427
>pdb|1GPA|A Chain A, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
pdb|1GPA|B Chain B, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
pdb|1GPA|C Chain C, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
pdb|1GPA|D Chain D, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
Length = 842
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/400 (45%), Positives = 259/400 (64%), Gaps = 12/400 (3%)
Query: 601 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 660
+ MA+LC+ GSHAVNGVA IHSEI+ +F +FY+L P KFQNKTNG+TPRRW+ CNP
Sbjct: 439 INMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPG 498
Query: 661 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 720
L+ I+ +G E+++++ +L +L + D+E K+ NK+K ++++ + +
Sbjct: 499 LAEIIAERIG-EEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHI 557
Query: 721 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 780
+P+++FD+QVKRIHEYKRQL+N L ++ Y ++K+ E VPR + GGKA Y
Sbjct: 558 NPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKK----EPNKFVVPRTVMIGGKAAPGY 613
Query: 781 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 840
AK I+K IT +G VNHDP +GD L+VIF+ +Y VS+AE +IPA++LS+ ISTAG EA
Sbjct: 614 HMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEA 673
Query: 841 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPD 900
SGT NMKF +NG + IGT+DGANVE+ +E GEENFF+FG R ++ L + + D
Sbjct: 674 SGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYD 733
Query: 901 ARFEEVKKFVK---SGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDE 957
R E+++ ++ SG F D + D F V D+ Y++CQE+V
Sbjct: 734 -RIPELRQIIEQLSSGFFSPKQPDLFKDIV---NMLMHHDRFKVFADYEEYVKCQERVSA 789
Query: 958 AYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIP 997
Y + + WTRM I N A S KFSSDRTI +YAR+IW + P
Sbjct: 790 LYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEP 829
Score = 341 bits (874), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 171/397 (43%), Positives = 241/397 (60%), Gaps = 8/397 (2%)
Query: 99 HAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGR 158
H FT + P +FA A +VRD L+ W T ++Y + K+ YYLS+EF GR
Sbjct: 34 HLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYMGR 93
Query: 159 ALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDXXXXXXXXXXXXSCFLDSMATLNYP 218
L N + NL L A EA +LG +E + E D +CFLDSMATL
Sbjct: 94 TLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLA 153
Query: 219 AWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGK 278
A+GYG+RY++G+F Q+I Q E A+DWL GNPWE R + + PV FYG++ S G
Sbjct: 154 AYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQG- 212
Query: 279 SHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTN 338
+ W+ + + A+ YD P+PGY+ +RLWS P+ DF+L FN G + +A
Sbjct: 213 AKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAPN-DFNLKDFNVGGYIQAVLDRNL 271
Query: 339 AEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEK-----RSGANVNWEEFPE 393
AE I +LYP D EGK LRLKQ+Y + +A+LQDII RF+ R N++ FP+
Sbjct: 272 AENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTNFDAFPD 331
Query: 394 KVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFEL 453
KVA+Q+NDTHP+L IPEL+R+L+DL+ L W +AW +T +T AYTNHTV+PEALE+W L
Sbjct: 332 KVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVIPEALERWPVHL 391
Query: 454 MQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEK 490
++ LLPRH++II I++ ++ + + + D D L +
Sbjct: 392 LETLLPRHLQIIYEINQRFLNRVAAAF-PGDVDRLRR 427
>pdb|2GJ4|A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In
Complex With Ligand
Length = 824
Score = 365 bits (936), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/400 (45%), Positives = 259/400 (64%), Gaps = 12/400 (3%)
Query: 601 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 660
+ MA+LC+ GSHAVNGVA IHSEI+ +F +FY+L P KFQNKTNG+TPRRW+ CNP
Sbjct: 428 INMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPG 487
Query: 661 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 720
L+ I+ +G E+++++ +L +L + D+E K+ NK+K ++++ + +
Sbjct: 488 LAEIIAERIG-EEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHI 546
Query: 721 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 780
+P+++FD+QVKRIHEYKRQL+N L ++ Y ++K+ E VPR + GGKA Y
Sbjct: 547 NPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKK----EPNKFVVPRTVMIGGKAAPGY 602
Query: 781 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 840
AK I+K IT +G VNHDP +GD L+VIF+ +Y VS+AE +IPA++LS+ ISTAG EA
Sbjct: 603 HMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEA 662
Query: 841 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPD 900
SGT NMKF +NG + IGT+DGANVE+ +E GEENFF+FG R ++ L + + D
Sbjct: 663 SGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYD 722
Query: 901 ARFEEVKKFVK---SGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDE 957
R E+++ ++ SG F D + D F V D+ Y++CQE+V
Sbjct: 723 -RIPELRQIIEQLSSGFFSPKQPDLFKDIV---NMLMHHDRFKVFADYEEYVKCQERVSA 778
Query: 958 AYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIP 997
Y + + WTRM I N A S KFSSDRTI +YAR+IW + P
Sbjct: 779 LYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEP 818
Score = 342 bits (877), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 172/397 (43%), Positives = 241/397 (60%), Gaps = 8/397 (2%)
Query: 99 HAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGR 158
H FT + P +FA A +VRD L+ W T ++Y + K+ YYLS+EF GR
Sbjct: 23 HLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYMGR 82
Query: 159 ALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDXXXXXXXXXXXXSCFLDSMATLNYP 218
L N + NL L A EA +LG +E + E D +CFLDSMATL
Sbjct: 83 TLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLA 142
Query: 219 AWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGK 278
A+GYG+RY++G+F Q+I Q E A+DWL GNPWE R + + PV FYG++ S G
Sbjct: 143 AYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQG- 201
Query: 279 SHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTN 338
+ W+ + + A+ YD P+PGY+ +RLWS P+ DF+L FN G + +A
Sbjct: 202 AKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAPN-DFNLKDFNVGGYIQAVLDRNL 260
Query: 339 AEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEK-----RSGANVNWEEFPE 393
AE I +LYP D EGK LRLKQ+Y + +A+LQDII RF+ R N++ FP+
Sbjct: 261 AENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTNFDAFPD 320
Query: 394 KVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFEL 453
KVA+Q+NDTHP+L IPEL+R+L+DL+ L W +AW +T +T AYTNHTVLPEALE+W L
Sbjct: 321 KVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHL 380
Query: 454 MQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEK 490
++ LLPRH++II I++ ++ + + + D D L +
Sbjct: 381 LETLLPRHLQIIYEINQRFLNRVAAAF-PGDVDRLRR 416
>pdb|2GM9|A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In
Complex With Thienopyrrole
Length = 825
Score = 365 bits (936), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/400 (45%), Positives = 259/400 (64%), Gaps = 12/400 (3%)
Query: 601 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 660
+ MA+LC+ GSHAVNGVA IHSEI+ +F +FY+L P KFQNKTNG+TPRRW+ CNP
Sbjct: 428 INMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPG 487
Query: 661 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 720
L+ I+ +G E+++++ +L +L + D+E K+ NK+K ++++ + +
Sbjct: 488 LAEIIAERIG-EEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHI 546
Query: 721 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 780
+P+++FD+QVKRIHEYKRQL+N L ++ Y ++K+ E VPR + GGKA Y
Sbjct: 547 NPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKK----EPNKFVVPRTVMIGGKAAPGY 602
Query: 781 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 840
AK I+K IT +G VNHDP +GD L+VIF+ +Y VS+AE +IPA++LS+ ISTAG EA
Sbjct: 603 HMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEA 662
Query: 841 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPD 900
SGT NMKF +NG + IGT+DGANVE+ +E GEENFF+FG R ++ L + + D
Sbjct: 663 SGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYD 722
Query: 901 ARFEEVKKFVK---SGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDE 957
R E+++ ++ SG F D + D F V D+ Y++CQE+V
Sbjct: 723 -RIPELRQIIEQLSSGFFSPKQPDLFKDIV---NMLMHHDRFKVFADYEEYVKCQERVSA 778
Query: 958 AYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIP 997
Y + + WTRM I N A S KFSSDRTI +YAR+IW + P
Sbjct: 779 LYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEP 818
Score = 342 bits (877), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 172/397 (43%), Positives = 241/397 (60%), Gaps = 8/397 (2%)
Query: 99 HAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGR 158
H FT + P +FA A +VRD L+ W T ++Y + K+ YYLS+EF GR
Sbjct: 23 HLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYMGR 82
Query: 159 ALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDXXXXXXXXXXXXSCFLDSMATLNYP 218
L N + NL L A EA +LG +E + E D +CFLDSMATL
Sbjct: 83 TLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLA 142
Query: 219 AWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGK 278
A+GYG+RY++G+F Q+I Q E A+DWL GNPWE R + + PV FYG++ S G
Sbjct: 143 AYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQG- 201
Query: 279 SHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTN 338
+ W+ + + A+ YD P+PGY+ +RLWS P+ DF+L FN G + +A
Sbjct: 202 AKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAPN-DFNLKDFNVGGYIQAVLDRNL 260
Query: 339 AEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEK-----RSGANVNWEEFPE 393
AE I +LYP D EGK LRLKQ+Y + +A+LQDII RF+ R N++ FP+
Sbjct: 261 AENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTNFDAFPD 320
Query: 394 KVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFEL 453
KVA+Q+NDTHP+L IPEL+R+L+DL+ L W +AW +T +T AYTNHTVLPEALE+W L
Sbjct: 321 KVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHL 380
Query: 454 MQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEK 490
++ LLPRH++II I++ ++ + + + D D L +
Sbjct: 381 LETLLPRHLQIIYEINQRFLNRVAAAF-PGDVDRLRR 416
>pdb|2FFR|A Chain A, Crystallographic Studies On
N-Azido-Beta-D-Glucopyranosylamine, An Inhibitor Of
Glycogen Phosphorylase: Comparison With N-Acetyl-Beta-D-
Glucopyranosylamine
Length = 825
Score = 365 bits (936), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/400 (45%), Positives = 259/400 (64%), Gaps = 12/400 (3%)
Query: 601 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 660
+ MA+LC+ GSHAVNGVA IHSEI+ +F +FY+L P KFQNKTNG+TPRRW+ CNP
Sbjct: 428 INMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPG 487
Query: 661 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 720
L+ I+ +G E+++++ +L +L + D+E K+ NK+K ++++ + +
Sbjct: 488 LAEIIAERIG-EEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHI 546
Query: 721 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 780
+P+++FD+QVKRIHEYKRQL+N L ++ Y ++K+ E VPR + GGKA Y
Sbjct: 547 NPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKK----EPNKFVVPRTVMIGGKAAPGY 602
Query: 781 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 840
AK I+K IT +G VNHDP +GD L+VIF+ +Y VS+AE +IPA++LS+ ISTAG EA
Sbjct: 603 HMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEA 662
Query: 841 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPD 900
SGT NMKF +NG + IGT+DGANVE+ +E GEENFF+FG R ++ L + + D
Sbjct: 663 SGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYD 722
Query: 901 ARFEEVKKFVK---SGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDE 957
R E+++ ++ SG F D + D F V D+ Y++CQE+V
Sbjct: 723 -RIPELRQIIEQLSSGFFSPKQPDLFKDIV---NMLMHHDRFKVFADYEEYVKCQERVSA 778
Query: 958 AYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIP 997
Y + + WTRM I N A S KFSSDRTI +YAR+IW + P
Sbjct: 779 LYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEP 818
Score = 340 bits (873), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 172/397 (43%), Positives = 241/397 (60%), Gaps = 8/397 (2%)
Query: 99 HAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGR 158
H FT + P +FA A +VRD L+ W T ++Y + K+ YYLS+EF GR
Sbjct: 23 HLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYMGR 82
Query: 159 ALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDXXXXXXXXXXXXSCFLDSMATLNYP 218
L N + NL L A EA +LG +E + E D +CFLDSMATL
Sbjct: 83 TLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLA 142
Query: 219 AWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGK 278
A+GYG+RY++G+F Q+I Q E A+DWL GNPWE R + + PV FYG++ S G
Sbjct: 143 AYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQG- 201
Query: 279 SHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTN 338
+ W+ + + A+ YD P+PGY+ +RLWS P+ DF+L FN G + +A
Sbjct: 202 AKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAPN-DFNLKDFNVGGYIQAVLDRNL 260
Query: 339 AEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEK-----RSGANVNWEEFPE 393
AE I +LYP D EGK LRLKQ+Y + +A+LQDII RF+ R N++ FP+
Sbjct: 261 AENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPRVTNFDAFPD 320
Query: 394 KVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFEL 453
KVA+Q+NDTHP+L IPEL+R+L+DL+ L W +AW +T +T AYTNHTVLPEALE+W L
Sbjct: 321 KVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHL 380
Query: 454 MQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEK 490
++ LLPRH++II I++ ++ + + + D D L +
Sbjct: 381 LETLLPRHLQIIYEINQRFLNRVAAAF-PGDVDRLRR 416
>pdb|1ABB|A Chain A, Control Of Phosphorylase B Conformation By A Modified
Cofactor: Crystallographic Studies On R-State Glycogen
Phosphorylase Reconstituted With Pyridoxal
5'-Diphosphate
pdb|1ABB|B Chain B, Control Of Phosphorylase B Conformation By A Modified
Cofactor: Crystallographic Studies On R-State Glycogen
Phosphorylase Reconstituted With Pyridoxal
5'-Diphosphate
pdb|1ABB|C Chain C, Control Of Phosphorylase B Conformation By A Modified
Cofactor: Crystallographic Studies On R-State Glycogen
Phosphorylase Reconstituted With Pyridoxal
5'-Diphosphate
pdb|1ABB|D Chain D, Control Of Phosphorylase B Conformation By A Modified
Cofactor: Crystallographic Studies On R-State Glycogen
Phosphorylase Reconstituted With Pyridoxal
5'-Diphosphate
Length = 828
Score = 364 bits (935), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/400 (45%), Positives = 259/400 (64%), Gaps = 12/400 (3%)
Query: 601 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 660
+ MA+LC+ GSHAVNGVA IHSEI+ +F +FY+L P KFQNKTNG+TPRRW+ CNP
Sbjct: 430 INMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPG 489
Query: 661 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 720
L+ I+ +G E+++++ +L +L + D+E K+ NK+K ++++ + +
Sbjct: 490 LAEIIAERIG-EEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHI 548
Query: 721 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 780
+P+++FD+QVKRIHEYKRQL+N L ++ Y ++K+ E VPR + GGKA Y
Sbjct: 549 NPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKK----EPNKFVVPRTVMIGGKAAPGY 604
Query: 781 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 840
AK I+K IT +G VNHDP +GD L+VIF+ +Y VS+AE +IPA++LS+ ISTAG EA
Sbjct: 605 HMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEA 664
Query: 841 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPD 900
SGT NMKF +NG + IGT+DGANVE+ +E GEENFF+FG R ++ L + + D
Sbjct: 665 SGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYD 724
Query: 901 ARFEEVKKFVK---SGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDE 957
R E+++ ++ SG F D + D F V D+ Y++CQE+V
Sbjct: 725 -RIPELRQIIEQLSSGFFSPKQPDLFKDIV---NMLMHHDRFKVFADYEEYVKCQERVSA 780
Query: 958 AYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIP 997
Y + + WTRM I N A S KFSSDRTI +YAR+IW + P
Sbjct: 781 LYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEP 820
Score = 341 bits (874), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 171/397 (43%), Positives = 241/397 (60%), Gaps = 8/397 (2%)
Query: 99 HAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGR 158
H FT + P +FA A +VRD L+ W T ++Y + K+ YYLS+EF GR
Sbjct: 25 HLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYMGR 84
Query: 159 ALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDXXXXXXXXXXXXSCFLDSMATLNYP 218
L N + NL L A EA +LG +E + E D +CFLDSMATL
Sbjct: 85 TLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLA 144
Query: 219 AWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGK 278
A+GYG+RY++G+F Q+I Q E A+DWL GNPWE R + + PV FYG++ S G
Sbjct: 145 AYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQG- 203
Query: 279 SHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTN 338
+ W+ + + A+ YD P+PGY+ +RLWS P+ DF+L FN G + +A
Sbjct: 204 AKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAPN-DFNLKDFNVGGYIQAVLDRNL 262
Query: 339 AEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEK-----RSGANVNWEEFPE 393
AE I +LYP D EGK LRLKQ+Y + +A+LQDII RF+ R N++ FP+
Sbjct: 263 AENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTNFDAFPD 322
Query: 394 KVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFEL 453
KVA+Q+NDTHP+L IPEL+R+L+DL+ L W +AW +T +T AYTNHTV+PEALE+W L
Sbjct: 323 KVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVIPEALERWPVHL 382
Query: 454 MQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEK 490
++ LLPRH++II I++ ++ + + + D D L +
Sbjct: 383 LETLLPRHLQIIYEINQRFLNRVAAAF-PGDVDRLRR 418
>pdb|1C50|A Chain A, Identification And Structural Characterization Of A Novel
Allosteric Binding Site Of Glycogen Phosphorylase B
Length = 830
Score = 364 bits (935), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/400 (45%), Positives = 259/400 (64%), Gaps = 12/400 (3%)
Query: 601 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 660
+ MA+LC+ GSHAVNGVA IHSEI+ +F +FY+L P KFQNKTNG+TPRRW+ CNP
Sbjct: 427 INMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPG 486
Query: 661 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 720
L+ I+ +G E+++++ +L +L + D+E K+ NK+K ++++ + +
Sbjct: 487 LAEIIAERIG-EEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHI 545
Query: 721 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 780
+P+++FD+QVKRIHEYKRQL+N L ++ Y ++K+ E VPR + GGKA Y
Sbjct: 546 NPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKK----EPNKFVVPRTVMIGGKAAPGY 601
Query: 781 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 840
AK I+K IT +G VNHDP +GD L+VIF+ +Y VS+AE +IPA++LS+ ISTAG EA
Sbjct: 602 HMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEA 661
Query: 841 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPD 900
SGT NMKF +NG + IGT+DGANVE+ +E GEENFF+FG R ++ L + + D
Sbjct: 662 SGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYD 721
Query: 901 ARFEEVKKFVK---SGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDE 957
R E+++ ++ SG F D + D F V D+ Y++CQE+V
Sbjct: 722 -RIPELRQIIEQLSSGFFSPKQPDLFKDIV---NMLMHHDRFKVFADYEEYVKCQERVSA 777
Query: 958 AYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIP 997
Y + + WTRM I N A S KFSSDRTI +YAR+IW + P
Sbjct: 778 LYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEP 817
Score = 340 bits (873), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 171/397 (43%), Positives = 241/397 (60%), Gaps = 8/397 (2%)
Query: 99 HAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGR 158
H FT + P +FA A +VRD L+ W T ++Y + K+ YYLS+EF GR
Sbjct: 22 HLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYMGR 81
Query: 159 ALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDXXXXXXXXXXXXSCFLDSMATLNYP 218
L N + NL L A EA +LG +E + E D +CFLDSMATL
Sbjct: 82 TLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLA 141
Query: 219 AWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGK 278
A+GYG+RY++G+F Q+I Q E A+DWL GNPWE R + + PV FYG++ S G
Sbjct: 142 AYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQG- 200
Query: 279 SHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTN 338
+ W+ + + A+ YD P+PGY+ +RLWS P+ DF+L FN G + +A
Sbjct: 201 AKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAPN-DFNLKDFNVGGYIQAVLDRNL 259
Query: 339 AEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEK-----RSGANVNWEEFPE 393
AE I +LYP D EGK LRLKQ+Y + +A+LQDII RF+ R N++ FP+
Sbjct: 260 AENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTNFDAFPD 319
Query: 394 KVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFEL 453
KVA+Q+NDTHP+L IPEL+R+L+DL+ L W +AW +T +T AYTNHTV+PEALE+W L
Sbjct: 320 KVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVIPEALERWPVHL 379
Query: 454 MQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEK 490
++ LLPRH++II I++ ++ + + + D D L +
Sbjct: 380 LETLLPRHLQIIYEINQRFLNRVAAAF-PGDVDRLRR 415
>pdb|1YGP|A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With
Phosphate Bound In The Active Site.
pdb|1YGP|B Chain B, Phosphorylated Form Of Yeast Glycogen Phosphorylase With
Phosphate Bound In The Active Site
Length = 879
Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/393 (48%), Positives = 244/393 (62%), Gaps = 23/393 (5%)
Query: 116 AFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGRALLNAIGNLGL------ 169
A+ A + S+RD+L+I+WN T + + + K+ YYLS+EFL GRAL NA+ N+ +
Sbjct: 68 AYEAASMSIRDNLVIDWNKTQQKFTTRDPKRVYYLSLEFLMGRALDNALINMKIEDPEDP 127
Query: 170 ---TGAYAE----ALSKLGQSLENVVSQEPDXXXXXXXXXXXXSCFLDSMATLNYPAWGY 222
G E AL +LG LE+V+ QEPD +CF+DSMAT PAWGY
Sbjct: 128 AASKGKPREMIKGALDELGFKLEDVLDQEPDAGLGNGGLGRLAACFVDSMATEGIPAWGY 187
Query: 223 GLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGK---- 278
GLRY+YG+F Q+I Q E + WL GNPWEIERN+V PV FYG + GK
Sbjct: 188 GLRYEYGIFAQKIIDGYQVETPDYWLNSGNPWEIERNEVQIPVTFYGYVDRPEGGKTTLS 247
Query: 279 -SHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALT 337
S WIGGE + AVAYD P+PG+KT NLRLW P+ +FDL+ FN GD+ +
Sbjct: 248 ASQWIGGERVLAVAYDFPVPGFKTSNVNNLRLWQAR-PTTEFDLNKFNNGDYKNSVAQQQ 306
Query: 338 NAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEFPEKVAV 397
AE I +LYP D +GK LRLKQQY C+ASL DI+ RF+K W EFP++VA+
Sbjct: 307 RAESITAVLYPNDNFAQGKELRLKQQYFWCAASLHDILRRFKKSKRP---WTEFPDQVAI 363
Query: 398 QMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKL 457
Q+NDTHPTL I EL R+L+DL+ L W EAW+I +T AYTNHTV+ EALEKW L L
Sbjct: 364 QLNDTHPTLAIVELQRVLVDLEKLDWHEAWDIVTKTFAYTNHTVMQEALEKWPRRLFGHL 423
Query: 458 LPRHMEIIEMIDEELVHTIVSEYGTADPDLLEK 490
LPRH+EII I+ + + ++ D DLL +
Sbjct: 424 LPRHLEIIYDINWFFLEDVAKKF-PKDVDLLSR 455
Score = 353 bits (905), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 188/413 (45%), Positives = 265/413 (64%), Gaps = 17/413 (4%)
Query: 601 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLW-PEKFQNKTNGVTPRRWIRFCNP 659
+RMA L +VGSH VNGV E+HSE++ +F +F K + P KF N TNG+TPRRW++ NP
Sbjct: 468 IRMAFLAIVGSHKVNGVVELHSELIKTTIFKDFIKFYGPSKFVNVTNGITPRRWLKQANP 527
Query: 660 DLSSILTSWLG--TEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIK-EKT 716
L+ +++ L TE+++ + KL +L K+ ++++ ++ K NNK+++V IK E
Sbjct: 528 SLAKLISETLNDPTEEYLLDMAKLTQLEKYVEDKEFLKKWNQVKLNNKIRLVDLIKKEND 587
Query: 717 GYSVS-----PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEM----SAVERKAKFVP 767
G + D +FD+QVKRIHEYKRQ +N+ GI+YRY MK M +++E A+ P
Sbjct: 588 GVDIINREYLDDTLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKNMLKNGASIEEVARKYP 647
Query: 768 R-VCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPA 826
R V IFGGK+ Y AK I+K I V VN+D I LLKV+FV DYNVS AE++IPA
Sbjct: 648 RKVSIFGGKSAPGYYMAKLIIKLINCVADIVNNDESIEHLLKVVFVADYNVSKAEIIIPA 707
Query: 827 SELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIA 886
S+LS+HISTAG EASGTSNMKF MNG ++IGT+DGANVEI +E+GE+N FLFG + +
Sbjct: 708 SDLSEHISTAGTEASGTSNMKFVMNGGLIIGTVDGANVEITREIGEDNVFLFGNLSENVE 767
Query: 887 GLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFP 946
LR + + V +++SG F N +E ++ + G DY+LV DF
Sbjct: 768 ELRYNHQYHPQDLPSSLDSVLSYIESGQFSPENPNEFKPLVDSIKYHG--DYYLVSDDFE 825
Query: 947 SYLECQEKVDEAYCDQK-RWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPV 998
SYL E VD+ + +Q+ W + S+++ A FSSDR I+EY+ IWN+ PV
Sbjct: 826 SYLATHELVDQEFHNQRSEWLKKSVLSLANVGFFSSDRCIEEYSDTIWNVEPV 878
>pdb|1NOI|A Chain A, Complex Of Glycogen Phosphorylase With A Transition State
Analogue Nojirimycin Tetrazole And Phosphate In The T
And R States
pdb|1NOI|B Chain B, Complex Of Glycogen Phosphorylase With A Transition State
Analogue Nojirimycin Tetrazole And Phosphate In The T
And R States
pdb|1NOI|C Chain C, Complex Of Glycogen Phosphorylase With A Transition State
Analogue Nojirimycin Tetrazole And Phosphate In The T
And R States
pdb|1NOI|D Chain D, Complex Of Glycogen Phosphorylase With A Transition State
Analogue Nojirimycin Tetrazole And Phosphate In The T
And R States
pdb|1NOJ|A Chain A, Complex Of Glycogen Phosphorylase With A Transition State
Analogue Nojirimycin Tetrazole And Phosphate In The T
State
pdb|1NOK|A Chain A, Complex Of Glycogen Phosphorylase With A Transition State
Analogue Nojirimycin Tetrazole And Phosphate In The T
State
Length = 842
Score = 363 bits (931), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/400 (45%), Positives = 258/400 (64%), Gaps = 12/400 (3%)
Query: 601 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 660
+ MA+LC+ GSHAVNGVA IHSEI+ +F +FY+L P KFQNKTNG+TPRRW+ CNP
Sbjct: 439 INMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPG 498
Query: 661 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 720
L+ I+ +G E+++++ +L +L + D+E K+ NK+K ++++ + +
Sbjct: 499 LAEIIAERIG-EEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHI 557
Query: 721 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 780
+P+++FD+QVKRIHEYKRQL+N L ++ Y ++K+ E VPR + GGK Y
Sbjct: 558 NPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKK----EPNKFVVPRTVMIGGKPAPGY 613
Query: 781 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 840
AK I+K IT +G VNHDP +GD L+VIF+ +Y VS+AE +IPA++LS+ ISTAG EA
Sbjct: 614 HMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEA 673
Query: 841 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPD 900
SGT NMKF +NG + IGT+DGANVE+ +E GEENFF+FG R ++ L + + D
Sbjct: 674 SGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYD 733
Query: 901 ARFEEVKKFVK---SGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDE 957
R E+++ ++ SG F D + D F V D+ Y++CQE+V
Sbjct: 734 -RIPELRQIIEQLSSGFFSPKQPDLFKDIV---NMLMHHDRFKVFADYEEYVKCQERVSA 789
Query: 958 AYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIP 997
Y + + WTRM I N A S KFSSDRTI +YAR+IW + P
Sbjct: 790 LYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEP 829
Score = 341 bits (874), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 171/397 (43%), Positives = 241/397 (60%), Gaps = 8/397 (2%)
Query: 99 HAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGR 158
H FT + P +FA A +VRD L+ W T ++Y + K+ YYLS+EF GR
Sbjct: 34 HLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYMGR 93
Query: 159 ALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDXXXXXXXXXXXXSCFLDSMATLNYP 218
L N + NL L A EA +LG +E + E D +CFLDSMATL
Sbjct: 94 TLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLA 153
Query: 219 AWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGK 278
A+GYG+RY++G+F Q+I Q E A+DWL GNPWE R + + PV FYG++ S G
Sbjct: 154 AYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQG- 212
Query: 279 SHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTN 338
+ W+ + + A+ YD P+PGY+ +RLWS P+ DF+L FN G + +A
Sbjct: 213 AKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAPN-DFNLKDFNVGGYIQAVLDRNL 271
Query: 339 AEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEK-----RSGANVNWEEFPE 393
AE I +LYP D EGK LRLKQ+Y + +A+LQDII RF+ R N++ FP+
Sbjct: 272 AENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTNFDAFPD 331
Query: 394 KVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFEL 453
KVA+Q+NDTHP+L IPEL+R+L+DL+ L W +AW +T +T AYTNHTV+PEALE+W L
Sbjct: 332 KVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVIPEALERWPVHL 391
Query: 454 MQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEK 490
++ LLPRH++II I++ ++ + + + D D L +
Sbjct: 392 LETLLPRHLQIIYEINQRFLNRVAAAF-PGDVDRLRR 427
>pdb|2G9Q|A Chain A, The Crystal Structure Of The Glycogen Phosphorylase B- 1ab
Complex
pdb|2G9R|A Chain A, The Crystal Structure Of Glycogen Phosphorylase B In
Complex With (3r,
4r,5r)-5-Hydroxymethyl-1-(3-Phenylpropyl)-Piperidine-3,
4-Diol
pdb|2G9U|A Chain A, The Crystal Structure Of Glycogen Phosphorylase In Complex
With (3r,
4r,5r)-5-Hydroxymethyl-1-(3-Phenylpropyl)-Piperidine-3,
4-Diol And Phosphate
pdb|2G9V|A Chain A, The Crystal Structure Of Glycogen Phosphorylase In Complex
With (3r, 4r,5r)-5-Hydroxymethylpiperidine-3,4-Diol And
Phosphate
pdb|2OFF|A Chain A, The Crystal Structure Of Glycogen Phosphorylase B In
Complex With A Potent Allosteric Inhibitor
pdb|2QN1|A Chain A, Glycogen Phosphorylase B In Complex With Asiatic Acid
pdb|2QN2|A Chain A, Glycogen Phosphorylase B In Complex With Maslinic Acid
pdb|2QLM|A Chain A, Glycogen Phosphorylase In Complex With Fn67
pdb|2QLN|A Chain A, Glycogen Phosphorylase B In Complex With
N-4-Phenylbenzoyl- N'-Beta-D-Glucopyranosyl Urea
pdb|2QN3|A Chain A, Glycogen Phosphorylase In Complex With
N-4-Chlorobenzoyl-N- Beta-D-Glucopyranosyl Urea
pdb|2QNB|A Chain A, Glycogen Phosphorylase B In Complex With
N-Benzoyl-N'-Beta- D-Glucopyranosyl Urea
pdb|2QRM|A Chain A, Glycogen Phosphorylase B In Complex With (1r)-3'-(4-
Nitrophenyl)-Spiro[1,5-Anhydro-D-Glucitol-1,
5'-Isoxazoline]
pdb|2QRP|A Chain A, Glycogen Phosphorylase B In Complex With (1r)-3'-(2-
Naphthyl)-Spiro[1,5-Anhydro-D-Glucitol-1,5'-Isoxazoline]
pdb|2QRQ|A Chain A, Glycogen Phosphorylase B In Complex With (1r)-3'-(4-
Methylphenyl)-Spiro[1,5-Anhydro-D-Glucitol-1,5'-
Isoxazoline]
pdb|2QRG|A Chain A, Glycogen Phosphorylase B In Complex With (1r)-3'-(4-
Methoxyphenyl)-Spiro[1,5-Anhydro-D-Glucitol-1,5'-
Isoxazoline]
pdb|2QRH|A Chain A, Glycogen Phosphorylase B In Complex With (1r)-3'-
Phenylspiro[1,5-Anhydro-D-Glucitol-1,5'-Isoxazoline]
pdb|3BCR|A Chain A, Glycogen Phosphorylase B In Complex With Azt
pdb|3BCS|A Chain A, Glycogen Phosphorylase Complex With 1(-D-Glucopyranosyl)
Uracil
pdb|3BCU|A Chain A, Glucogen Phosphorylase Complex With Thymidine
pdb|3BD6|A Chain A, Glycogen Phosphorylase Complex With 1(-D-Ribofuranosyl)
Cyanuric Acid
pdb|3E3L|A Chain A, The R-state Glycogen Phosphorylase
pdb|3E3L|B Chain B, The R-state Glycogen Phosphorylase
pdb|3E3L|C Chain C, The R-state Glycogen Phosphorylase
pdb|3E3L|D Chain D, The R-state Glycogen Phosphorylase
pdb|3CUT|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With N-(-D-Glucopyranosyl)-N'-(2-Naphthyl)oxamide
pdb|3CUU|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With N-(-D-Glucopyranosyl)-N'-(2-Naphthyl)oxamides
pdb|3CUV|A Chain A, Tracking Structure Activity Relationships Of Glycogen
Phosphorylase Inhibitors: Synthesis, Kinetic And
Crystallographic Evaluation Of Analogues Of N-(-D-
Glucopyranosyl)-N'-Oxamides
pdb|3CUW|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With N-(-D-Glucopyranosyl)-N'-(2-Naphthyl)oxamides
pdb|3E3N|A Chain A, The Glycogen Phosphorylase B R State- Amp Complex
pdb|3E3N|B Chain B, The Glycogen Phosphorylase B R State- Amp Complex
pdb|3E3N|C Chain C, The Glycogen Phosphorylase B R State- Amp Complex
pdb|3E3N|D Chain D, The Glycogen Phosphorylase B R State- Amp Complex
pdb|3E3N|E Chain E, The Glycogen Phosphorylase B R State- Amp Complex
pdb|3E3N|F Chain F, The Glycogen Phosphorylase B R State- Amp Complex
pdb|3E3N|G Chain G, The Glycogen Phosphorylase B R State- Amp Complex
pdb|3E3N|H Chain H, The Glycogen Phosphorylase B R State- Amp Complex
pdb|3EBO|A Chain A, Glycogen Phosphorylase B/chrysin Complex
pdb|3EBP|A Chain A, Glycogen Phosphorylase B/flavopiridol Complex
pdb|3G2H|A Chain A, Crystal Structure Of 1-(Beta-D-Glucopyranosyl)-4-
Substituted-1,2,3-Triazoles In Complex With Glycogen
Phosphorylase
pdb|3G2I|A Chain A, Crystal Structure Of 1-(Beta-D-Glucopyranosyl)-4-
Substituted-1,2,3-Triazole
pdb|3G2J|A Chain A, Crystal Structure Of 1-(Beta-D-Glucopyranosyl)-4-
Substituted-1,2,3-Triazoles In Complex With Glycogen
Phosphorylase
pdb|3G2K|A Chain A, Crystal Structure Of 1-(Beta-D-Glucopyranosyl)-4-
Substituted-1,2,3-Triazole
pdb|3G2L|A Chain A, Crystal Structure Of 1-(Beta-D-Glucopyranosyl)-4-
Substituted-1,2,3-Triazoles In Complex With Glycogen
Phosphorylase
pdb|3G2N|A Chain A, Crystal Structure Of N-Acylglucosylamine With Glycogen
Phosphorylase
pdb|3MQF|A Chain A, Glycogen Phosphorylase Complexed With
4-Fluorobenzaldehyde-4-(Beta-D-
Glucopyranosyl)-Thiosemicarbazone
pdb|3MRT|A Chain A, Glycogen Phosphorylase Complexed With
4-Pyridinecarboxaldehyde-4- (Beta-D-Glucopyranosyl)
Thiosemicarbazone
pdb|3MRV|A Chain A, Glycogen Phosphorylase Complexed With
3-Hydroxybenzaldehyde-4-(Beta-D- Glucopyranosyl)
Thiosemicarbazone
pdb|3MRX|A Chain A, Glycogen Phosphorylase Complexed With
4-Methoxybenzaldehyde-4-(2,3,4,
6-Tetra-O-Acetyl-Beta-D-Glucopyranosyl)-
Thiosemicarbazone
pdb|3MS2|A Chain A, Glycogen Phosphorylase Complexed With
4-Methylbenzaldehyde-4-(Beta-D- Glucopyranosyl)
Thiosemicarbazone
pdb|3MS4|A Chain A, Glycogen Phosphorylase Complexed With
4-Trifluoromethylbenzaldehyde-4-
(Beta-D-Glucopyranosyl)-Thiosemicarbazone
pdb|3MS7|A Chain A, Glycogen Phosphorylase Complexed With
2-Chlorobenzaldehyde-4-(2,3,4,6-
Tetra-O-Acetyl-Beta-D-Glucopyranosyl) Thiosemicarbazone
pdb|3MT7|A Chain A, Glycogen Phosphorylase Complexed With
4-Bromobenzaldehyde-4-(Beta-D-
Glucopyranosyl)-Thiosemicarbazone
pdb|3MT8|A Chain A, Glycogen Phosphorylase Complexed With
4-Chlorobenzaldehyde-4-(Beta-D-
Glucopyranosyl)-Thiosemicarbazone
pdb|3MT9|A Chain A, Glycogen Phosphorylase Complexed With
4-Nitrobenzaldehyde-4-(Beta-D-
Glucopyranosyl)-Thiosemicarbazone
pdb|3MTA|A Chain A, Glycogen Phosphorylase Complexed With
3-Bromobenzaldehyde-4-(Beta-D-
Glucopyranosyl)-Thiosemicarbazone
pdb|3MTB|A Chain A, Glycogen Phosphorylase Complexed With
3-Chlorobenzaldehyde-4-(Beta-D-
Glucopyranosyl)-Thiosemicarbazone
pdb|3MTD|A Chain A, Glycogen Phosphorylase Complexed With
4-Hydroxybenzaldehyde-4-(Beta-D-
Glucopyranosyl)-Thiosemicarbazone
pdb|3MSC|A Chain A, Glycogen Phosphorylase Complexed With
2-Nitrobenzaldehyde-4-(Beta-D-
Glucopyranosyl)-Thiosemicarbazone
pdb|3NP7|A Chain A, Glycogen Phosphorylase Complexed With
2,5-Dihydroxy-3-(Beta-D- Glucopyranosyl)-Chlorobenzene
And 2,5-Dihydroxy-4-(Beta-D-
Glucopyranosyl)-Chlorobenzene
pdb|3NP9|A Chain A, Glycogen Phosphorylase Complexed With
3-(Beta-D-Glucopyranosyl)-2-
Hydroxy-5-Methoxy-Chlorobenzene
pdb|3NPA|A Chain A, Glycogen Phosphorylase Complexed With
2,5-Dihydroxy-4-(Beta-D- Glucopyranosyl)-Bromo-Benzene
pdb|3S0J|A Chain A, The Crystal Structure Of Glycogen Phosphorylase B In
Complex With 2,5-
Dihydroxy-4-(Beta-D-Glucopyranosyl)-Chlorobenzene
pdb|3SYM|A Chain A, Glycogen Phosphorylase B In Complex With 3
-C-(Hydroxymethyl)-Beta-D- Glucopyranonucleoside Of
5-Fluorouracil
pdb|3SYR|A Chain A, Glycogen Phosphorylase B In Complex With
Beta-D-Glucopyranonucleoside 5-Fluorouracil
pdb|3T3D|A Chain A, Glycogen Phosphorylase B In Complex With Glcu
pdb|3T3E|A Chain A, Glycogen Phosphorylase B In Complex With Glcclu
pdb|3T3G|A Chain A, Glycogen Phosphorylase B In Complex With Glcbru
pdb|3T3H|A Chain A, Glycogen Phosphorylase B In Complex With Glciu
pdb|3T3I|A Chain A, Glycogen Phosphorylase B In Complex With Glccf3u
Length = 842
Score = 363 bits (931), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/400 (45%), Positives = 258/400 (64%), Gaps = 12/400 (3%)
Query: 601 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 660
+ MA+LC+ GSHAVNGVA IHSEI+ +F +FY+L P KFQNKTNG+TPRRW+ CNP
Sbjct: 439 INMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPG 498
Query: 661 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 720
L+ I+ +G E+++++ +L +L + D+E K+ NK+K ++++ + +
Sbjct: 499 LAEIIAERIG-EEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHI 557
Query: 721 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 780
+P+++FD+QVKRIHEYKRQL+N L ++ Y ++K+ E VPR + GGKA Y
Sbjct: 558 NPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKK----EPNKFVVPRTVMIGGKAAPGY 613
Query: 781 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 840
AK I+K IT +G VNHDP +GD L+VIF+ +Y VS+AE +IPA++LS+ ISTAG EA
Sbjct: 614 HMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEA 673
Query: 841 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPD 900
SGT NM F +NG + IGT+DGANVE+ +E GEENFF+FG R ++ L + + D
Sbjct: 674 SGTGNMXFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYD 733
Query: 901 ARFEEVKKFVK---SGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDE 957
R E+++ ++ SG F D + D F V D+ Y++CQE+V
Sbjct: 734 -RIPELRQIIEQLSSGFFSPKQPDLFKDIV---NMLMHHDRFKVFADYEEYVKCQERVSA 789
Query: 958 AYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIP 997
Y + + WTRM I N A S KFSSDRTI +YAR+IW + P
Sbjct: 790 LYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEP 829
Score = 342 bits (877), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 172/397 (43%), Positives = 241/397 (60%), Gaps = 8/397 (2%)
Query: 99 HAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGR 158
H FT + P +FA A +VRD L+ W T ++Y + K+ YYLS+EF GR
Sbjct: 34 HLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYMGR 93
Query: 159 ALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDXXXXXXXXXXXXSCFLDSMATLNYP 218
L N + NL L A EA +LG +E + E D +CFLDSMATL
Sbjct: 94 TLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLA 153
Query: 219 AWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGK 278
A+GYG+RY++G+F Q+I Q E A+DWL GNPWE R + + PV FYG++ S G
Sbjct: 154 AYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQG- 212
Query: 279 SHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTN 338
+ W+ + + A+ YD P+PGY+ +RLWS P+ DF+L FN G + +A
Sbjct: 213 AKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAPN-DFNLKDFNVGGYIQAVLDRNL 271
Query: 339 AEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEK-----RSGANVNWEEFPE 393
AE I +LYP D EGK LRLKQ+Y + +A+LQDII RF+ R N++ FP+
Sbjct: 272 AENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTNFDAFPD 331
Query: 394 KVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFEL 453
KVA+Q+NDTHP+L IPEL+R+L+DL+ L W +AW +T +T AYTNHTVLPEALE+W L
Sbjct: 332 KVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHL 391
Query: 454 MQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEK 490
++ LLPRH++II I++ ++ + + + D D L +
Sbjct: 392 LETLLPRHLQIIYEINQRFLNRVAAAF-PGDVDRLRR 427
>pdb|2PYD|A Chain A, The Crystal Structure Of Glycogen Phosphorylase In Complex
With Glucose At 100 K
pdb|2PYI|A Chain A, Crystal Structure Of Glycogen Phosphorylase In Complex
With Glucosyl Triazoleacetamide
pdb|3L79|A Chain A, Crystal Structure Of Glycogen Phosphorylase Dk1 Complex
pdb|3L7A|A Chain A, Crystal Structure Of Glycogen Phosphorylase Dk2 Complex
pdb|3L7B|A Chain A, Crystal Structure Of Glycogen Phosphorylase Dk3 Complex
pdb|3L7C|A Chain A, Crystal Structure Of Glycogen Phosphorylase Dk4 Complex
pdb|3L7D|A Chain A, Crystal Structure Of Glycogen Phosphorylase Dk5 Complex
Length = 843
Score = 363 bits (931), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/400 (45%), Positives = 258/400 (64%), Gaps = 12/400 (3%)
Query: 601 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 660
+ MA+LC+ GSHAVNGVA IHSEI+ +F +FY+L P KFQNKTNG+TPRRW+ CNP
Sbjct: 440 INMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPG 499
Query: 661 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 720
L+ I+ +G E+++++ +L +L + D+E K+ NK+K ++++ + +
Sbjct: 500 LAEIIAERIG-EEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHI 558
Query: 721 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 780
+P+++FD+QVKRIHEYKRQL+N L ++ Y ++K+ E VPR + GGKA Y
Sbjct: 559 NPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKK----EPNKFVVPRTVMIGGKAAPGY 614
Query: 781 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 840
AK I+K IT +G VNHDP +GD L+VIF+ +Y VS+AE +IPA++LS+ ISTAG EA
Sbjct: 615 HMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEA 674
Query: 841 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPD 900
SGT NM F +NG + IGT+DGANVE+ +E GEENFF+FG R ++ L + + D
Sbjct: 675 SGTGNMXFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYD 734
Query: 901 ARFEEVKKFVK---SGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDE 957
R E+++ ++ SG F D + D F V D+ Y++CQE+V
Sbjct: 735 -RIPELRQIIEQLSSGFFSPKQPDLFKDIV---NMLMHHDRFKVFADYEEYVKCQERVSA 790
Query: 958 AYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIP 997
Y + + WTRM I N A S KFSSDRTI +YAR+IW + P
Sbjct: 791 LYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEP 830
Score = 342 bits (877), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 172/397 (43%), Positives = 241/397 (60%), Gaps = 8/397 (2%)
Query: 99 HAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGR 158
H FT + P +FA A +VRD L+ W T ++Y + K+ YYLS+EF GR
Sbjct: 35 HLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYMGR 94
Query: 159 ALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDXXXXXXXXXXXXSCFLDSMATLNYP 218
L N + NL L A EA +LG +E + E D +CFLDSMATL
Sbjct: 95 TLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLA 154
Query: 219 AWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGK 278
A+GYG+RY++G+F Q+I Q E A+DWL GNPWE R + + PV FYG++ S G
Sbjct: 155 AYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQG- 213
Query: 279 SHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTN 338
+ W+ + + A+ YD P+PGY+ +RLWS P+ DF+L FN G + +A
Sbjct: 214 AKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAPN-DFNLKDFNVGGYIQAVLDRNL 272
Query: 339 AEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEK-----RSGANVNWEEFPE 393
AE I +LYP D EGK LRLKQ+Y + +A+LQDII RF+ R N++ FP+
Sbjct: 273 AENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTNFDAFPD 332
Query: 394 KVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFEL 453
KVA+Q+NDTHP+L IPEL+R+L+DL+ L W +AW +T +T AYTNHTVLPEALE+W L
Sbjct: 333 KVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHL 392
Query: 454 MQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEK 490
++ LLPRH++II I++ ++ + + + D D L +
Sbjct: 393 LETLLPRHLQIIYEINQRFLNRVAAAF-PGDVDRLRR 428
>pdb|3NC4|A Chain A, The Binding Of Beta-D-Glucopyranosyl-Thiosemicarbazone
Derivatives To Glycogen Phosphorylase: A New Class Of
Inhibitors
Length = 841
Score = 363 bits (931), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/400 (45%), Positives = 258/400 (64%), Gaps = 12/400 (3%)
Query: 601 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 660
+ MA+LC+ GSHAVNGVA IHSEI+ +F +FY+L P KFQNKTNG+TPRRW+ CNP
Sbjct: 438 INMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPG 497
Query: 661 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 720
L+ I+ +G E+++++ +L +L + D+E K+ NK+K ++++ + +
Sbjct: 498 LAEIIAERIG-EEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHI 556
Query: 721 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 780
+P+++FD+QVKRIHEYKRQL+N L ++ Y ++K+ E VPR + GGKA Y
Sbjct: 557 NPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKK----EPNKFVVPRTVMIGGKAAPGY 612
Query: 781 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 840
AK I+K IT +G VNHDP +GD L+VIF+ +Y VS+AE +IPA++LS+ ISTAG EA
Sbjct: 613 HMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEA 672
Query: 841 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPD 900
SGT NM F +NG + IGT+DGANVE+ +E GEENFF+FG R ++ L + + D
Sbjct: 673 SGTGNMXFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYD 732
Query: 901 ARFEEVKKFVK---SGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDE 957
R E+++ ++ SG F D + D F V D+ Y++CQE+V
Sbjct: 733 -RIPELRQIIEQLSSGFFSPKQPDLFKDIV---NMLMHHDRFKVFADYEEYVKCQERVSA 788
Query: 958 AYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIP 997
Y + + WTRM I N A S KFSSDRTI +YAR+IW + P
Sbjct: 789 LYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEP 828
Score = 342 bits (877), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 172/397 (43%), Positives = 241/397 (60%), Gaps = 8/397 (2%)
Query: 99 HAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGR 158
H FT + P +FA A +VRD L+ W T ++Y + K+ YYLS+EF GR
Sbjct: 33 HLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYMGR 92
Query: 159 ALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDXXXXXXXXXXXXSCFLDSMATLNYP 218
L N + NL L A EA +LG +E + E D +CFLDSMATL
Sbjct: 93 TLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLA 152
Query: 219 AWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGK 278
A+GYG+RY++G+F Q+I Q E A+DWL GNPWE R + + PV FYG++ S G
Sbjct: 153 AYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQG- 211
Query: 279 SHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTN 338
+ W+ + + A+ YD P+PGY+ +RLWS P+ DF+L FN G + +A
Sbjct: 212 AKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAPN-DFNLKDFNVGGYIQAVLDRNL 270
Query: 339 AEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEK-----RSGANVNWEEFPE 393
AE I +LYP D EGK LRLKQ+Y + +A+LQDII RF+ R N++ FP+
Sbjct: 271 AENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTNFDAFPD 330
Query: 394 KVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFEL 453
KVA+Q+NDTHP+L IPEL+R+L+DL+ L W +AW +T +T AYTNHTVLPEALE+W L
Sbjct: 331 KVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHL 390
Query: 454 MQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEK 490
++ LLPRH++II I++ ++ + + + D D L +
Sbjct: 391 LETLLPRHLQIIYEINQRFLNRVAAAF-PGDVDRLRR 426
>pdb|1Z6P|A Chain A, Glycogen Phosphorylase Amp Site Inhibitor Complex
pdb|1Z6Q|A Chain A, Glycogen Phosphorylase With Inhibitor In The Amp Site
pdb|1A8I|A Chain A, Spirohydantoin Inhibitor Of Glycogen Phosphorylase
pdb|2GPN|A Chain A, 100 K Structure Of Glycogen Phosphorylase At 2.0 Angstroms
Resolution
pdb|3E3O|A Chain A, Glycogen Phosphorylase R State-Imp Complex
pdb|3E3O|B Chain B, Glycogen Phosphorylase R State-Imp Complex
pdb|3E3O|C Chain C, Glycogen Phosphorylase R State-Imp Complex
pdb|3E3O|D Chain D, Glycogen Phosphorylase R State-Imp Complex
Length = 842
Score = 363 bits (931), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/400 (45%), Positives = 258/400 (64%), Gaps = 12/400 (3%)
Query: 601 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 660
+ MA+LC+ GSHAVNGVA IHSEI+ +F +FY+L P KFQNKTNG+TPRRW+ CNP
Sbjct: 439 INMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPG 498
Query: 661 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 720
L+ I+ +G E+++++ +L +L + D+E K+ NK+K ++++ + +
Sbjct: 499 LAEIIAERIG-EEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHI 557
Query: 721 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 780
+P+++FD+QVKRIHEYKRQL+N L ++ Y ++K+ E VPR + GGKA Y
Sbjct: 558 NPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKK----EPNKFVVPRTVMIGGKAAPGY 613
Query: 781 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 840
AK I+K IT +G VNHDP +GD L+VIF+ +Y VS+AE +IPA++LS+ ISTAG EA
Sbjct: 614 HMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEA 673
Query: 841 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPD 900
SGT NM F +NG + IGT+DGANVE+ +E GEENFF+FG R ++ L + + D
Sbjct: 674 SGTGNMXFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYD 733
Query: 901 ARFEEVKKFVK---SGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDE 957
R E+++ ++ SG F D + D F V D+ Y++CQE+V
Sbjct: 734 -RIPELRQIIEQLSSGFFSPKQPDLFKDIV---NMLMHHDRFKVFADYEEYVKCQERVSA 789
Query: 958 AYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIP 997
Y + + WTRM I N A S KFSSDRTI +YAR+IW + P
Sbjct: 790 LYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEP 829
Score = 341 bits (874), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 171/397 (43%), Positives = 241/397 (60%), Gaps = 8/397 (2%)
Query: 99 HAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGR 158
H FT + P +FA A +VRD L+ W T ++Y + K+ YYLS+EF GR
Sbjct: 34 HLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYMGR 93
Query: 159 ALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDXXXXXXXXXXXXSCFLDSMATLNYP 218
L N + NL L A EA +LG +E + E D +CFLDSMATL
Sbjct: 94 TLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLA 153
Query: 219 AWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGK 278
A+GYG+RY++G+F Q+I Q E A+DWL GNPWE R + + PV FYG++ S G
Sbjct: 154 AYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQG- 212
Query: 279 SHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTN 338
+ W+ + + A+ YD P+PGY+ +RLWS P+ DF+L FN G + +A
Sbjct: 213 AKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAPN-DFNLKDFNVGGYIQAVLDRNL 271
Query: 339 AEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEK-----RSGANVNWEEFPE 393
AE I +LYP D EGK LRLKQ+Y + +A+LQDII RF+ R N++ FP+
Sbjct: 272 AENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTNFDAFPD 331
Query: 394 KVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFEL 453
KVA+Q+NDTHP+L IPEL+R+L+DL+ L W +AW +T +T AYTNHTV+PEALE+W L
Sbjct: 332 KVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVIPEALERWPVHL 391
Query: 454 MQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEK 490
++ LLPRH++II I++ ++ + + + D D L +
Sbjct: 392 LETLLPRHLQIIYEINQRFLNRVAAAF-PGDVDRLRR 427
>pdb|4EJ2|A Chain A, Crystal Structure Of Gpb In Complex With Dk10
pdb|4EKE|A Chain A, Crystal Structure Of Gpb In Complex With Dk11
pdb|4EKY|A Chain A, Crystal Structure Of Gpb In Complex With Dk15
pdb|4EL0|A Chain A, Crystal Structure Of Gpb In Complex With Dk16
pdb|4EL5|A Chain A, Crystal Structure Of Gpb In Complex With Dk12
Length = 825
Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/400 (45%), Positives = 258/400 (64%), Gaps = 12/400 (3%)
Query: 601 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 660
+ MA+LC+ GSHAVNGVA IHSEI+ +F +FY+L P KFQNKTNG+TPRRW+ CNP
Sbjct: 428 INMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPG 487
Query: 661 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 720
L+ I+ +G E+++++ +L +L + D+E K+ NK+K ++++ + +
Sbjct: 488 LAEIIAERIG-EEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHI 546
Query: 721 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 780
+P+++FD+QVKRIHEYKRQL+N L ++ Y ++K+ E VPR + GGKA Y
Sbjct: 547 NPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKK----EPNKFVVPRTVMIGGKAAPGY 602
Query: 781 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 840
AK I+K IT +G VNHDP +GD L+VIF+ +Y VS+AE +IPA++LS+ ISTAG EA
Sbjct: 603 HMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEA 662
Query: 841 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPD 900
SGT NM F +NG + IGT+DGANVE+ +E GEENFF+FG R ++ L + + D
Sbjct: 663 SGTGNMXFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYD 722
Query: 901 ARFEEVKKFVK---SGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDE 957
R E+++ ++ SG F D + D F V D+ Y++CQE+V
Sbjct: 723 -RIPELRQIIEQLSSGFFSPKQPDLFKDIV---NMLMHHDRFKVFADYEEYVKCQERVSA 778
Query: 958 AYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIP 997
Y + + WTRM I N A S KFSSDRTI +YAR+IW + P
Sbjct: 779 LYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEP 818
Score = 342 bits (877), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 172/397 (43%), Positives = 241/397 (60%), Gaps = 8/397 (2%)
Query: 99 HAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGR 158
H FT + P +FA A +VRD L+ W T ++Y + K+ YYLS+EF GR
Sbjct: 23 HLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYMGR 82
Query: 159 ALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDXXXXXXXXXXXXSCFLDSMATLNYP 218
L N + NL L A EA +LG +E + E D +CFLDSMATL
Sbjct: 83 TLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLA 142
Query: 219 AWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGK 278
A+GYG+RY++G+F Q+I Q E A+DWL GNPWE R + + PV FYG++ S G
Sbjct: 143 AYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQG- 201
Query: 279 SHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTN 338
+ W+ + + A+ YD P+PGY+ +RLWS P+ DF+L FN G + +A
Sbjct: 202 AKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAPN-DFNLKDFNVGGYIQAVLDRNL 260
Query: 339 AEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEK-----RSGANVNWEEFPE 393
AE I +LYP D EGK LRLKQ+Y + +A+LQDII RF+ R N++ FP+
Sbjct: 261 AENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTNFDAFPD 320
Query: 394 KVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFEL 453
KVA+Q+NDTHP+L IPEL+R+L+DL+ L W +AW +T +T AYTNHTVLPEALE+W L
Sbjct: 321 KVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHL 380
Query: 454 MQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEK 490
++ LLPRH++II I++ ++ + + + D D L +
Sbjct: 381 LETLLPRHLQIIYEINQRFLNRVAAAF-PGDVDRLRR 416
>pdb|2C4M|A Chain A, Starch Phosphorylase: Structural Studies Explain Oxyanion-
Dependent Kinetic Stability And Regulatory Control.
pdb|2C4M|B Chain B, Starch Phosphorylase: Structural Studies Explain Oxyanion-
Dependent Kinetic Stability And Regulatory Control.
pdb|2C4M|C Chain C, Starch Phosphorylase: Structural Studies Explain Oxyanion-
Dependent Kinetic Stability And Regulatory Control.
pdb|2C4M|D Chain D, Starch Phosphorylase: Structural Studies Explain Oxyanion-
Dependent Kinetic Stability And Regulatory Control
Length = 796
Score = 349 bits (895), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 182/408 (44%), Positives = 258/408 (63%), Gaps = 19/408 (4%)
Query: 601 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 660
V MA + ++++NGVA +H+EI+ E ++Y LWPEKF NKTNGVTPRRW+R NP
Sbjct: 393 VHMAWIACYAAYSINGVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRMINPG 452
Query: 661 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 720
LS +LT G++DWVT+ +L +LR +AD++ + + RA K NK +I E+ G +
Sbjct: 453 LSDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFAEWILERQGIEI 512
Query: 721 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 780
P+++FD+Q+KR+HEYKRQLMN L ++ Y ++KE + A R IFG KA Y
Sbjct: 513 DPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPA----RTVIFGAKAAPGY 568
Query: 781 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 840
V+AK I+K I + VN+DPE+ LLKV+FV +YNVS AE ++PAS++S+ ISTAG EA
Sbjct: 569 VRAKAIIKLINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEA 628
Query: 841 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPD 900
SGTSNMKF MNG + +GT+DGANVEI VGEEN ++FGAR E+ LR+ + P
Sbjct: 629 SGTSNMKFMMNGALTLGTMDGANVEIVDSVGEENAYIFGARVEELPALRE-----SYKPY 683
Query: 901 ARFEEV---KKFVKSGVFGSYN------YDELMGSLEGNEGFGQADYFLVGKDFPSYLEC 951
+E V K+ + + G+ N + +L SL G +D + V DF Y E
Sbjct: 684 ELYETVPGLKRALDALDNGTLNDNNSGLFYDLKHSLIHGYGKDASDTYYVLGDFADYRET 743
Query: 952 QEKVDEAYC-DQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPV 998
++++ Y D W RM+ +N S +FSSDRTI++YA +IW + P
Sbjct: 744 RDRMAADYASDPLGWARMAWINICESGRFSSDRTIRDYATEIWKLEPT 791
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 143/367 (38%), Positives = 194/367 (52%), Gaps = 22/367 (5%)
Query: 107 SPEKFEPPKAFF-ATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGRALLNAIG 165
+P + F+ +++V++ + +W T E Y +Q +Y S EFL GRALLN +
Sbjct: 23 TPADLATDRKFWTGLSRAVQERIADDWERTREAYG--AARQQHYFSAEFLMGRALLNNLT 80
Query: 166 NLGLTGAYAEALSKLGQSLENVVSQEPDXXXXXXXXXXXXSCFLDSMATLNYPAWGYGLR 225
NLGL A A +LG L +++ E D +CFLDS T +YP GYGL
Sbjct: 81 NLGLVDEAAAATRELGHELTDILEIENDAALGNGGLGRLAACFLDSAVTQDYPVTGYGLL 140
Query: 226 YKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGE 285
Y++GLF+Q + Q E + W E P+ I R V F D K+
Sbjct: 141 YRFGLFRQSFNEGFQVEKPDPWREEEYPFTIRRASDQLVVCF-------DDMKT------ 187
Query: 286 DIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYI 345
+A+ YD+PI GY T LRLW P E+FD AFNA T A IC +
Sbjct: 188 --RAIPYDMPITGYGTHNVGTLRLWKAE-PWEEFDYDAFNAQRFTDAIIERERVSDICRV 244
Query: 346 LYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPT 405
LYP D + EGK LR++QQY SASLQ +I + + + F E +VQ+NDTHP
Sbjct: 245 LYPNDTTYEGKKLRVRQQYFFTSASLQAMI---QDHLAHHKDLSNFAEFHSVQLNDTHPV 301
Query: 406 LCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEII 465
L IPEL+R+L+D + W+E+W I +T AYTNHTVL EALE+W ++ Q+L R EII
Sbjct: 302 LAIPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQWDEQIFQQLFWRVWEII 361
Query: 466 EMIDEEL 472
ID
Sbjct: 362 AEIDRRF 368
>pdb|1E3D|A Chain A, [nife] Hydrogenase From Desulfovibrio Desulfuricans Atcc
27774
pdb|1E3D|C Chain C, [nife] Hydrogenase From Desulfovibrio Desulfuricans Atcc
27774
Length = 266
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 855 LIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKK 908
L+ L G +E+ EVG F FG H++ RK G+F P EE +K
Sbjct: 161 LVAFLKGQKIEL-DEVGRPVMF-FGQSVHDLCERRKHFDAGEFAPSFNSEEARK 212
>pdb|4GVW|A Chain A, Three-Dimensional Structure Of The De Novo Designed Serine
Hydrolase 2bfq_3, Northeast Structural Genomics
Consortium (Nesg) Target Or248
Length = 199
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 426 AWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTI 476
A N+ +R + Y HTV P WS EL +KL + +E +E V +I
Sbjct: 85 AMNLEERGIKYVFHTVGPICSGMWSEELKEKLYKAFLGPLEKAEEMGVESI 135
>pdb|2BFR|A Chain A, The Macro Domain Is An Adp-Ribose Binding Module
pdb|2BFQ|A Chain A, Macro Domains Are Adp-Ribose Binding Molecules
Length = 192
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 426 AWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTI 476
A N+ +R + Y HTV P WS EL +KL + +E +E V +I
Sbjct: 85 AMNLEERGIKYVFHTVGPICSGMWSEELKEKLYKAFLGPLEKAEEMGVESI 135
>pdb|1HJZ|A Chain A, Crystal Structure Of Af1521 Protein Containing A Macroh2a
Domain
pdb|1HJZ|B Chain B, Crystal Structure Of Af1521 Protein Containing A Macroh2a
Domain
Length = 192
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 426 AWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTI 476
A N+ +R + Y HTV P WS EL +KL + +E +E V +I
Sbjct: 85 AMNLEERGIKYVFHTVGPICSGMWSEELKEKLYKAFLGPLEKAEEMGVESI 135
>pdb|1VHU|A Chain A, Crystal Structure Of A Putative Phosphoesterase
Length = 211
Score = 31.6 bits (70), Expect = 2.2, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 426 AWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTI 476
A N+ +R + Y HTV P WS EL +KL + +E +E V +I
Sbjct: 94 AXNLEERGIKYVFHTVGPICSGXWSEELKEKLYKAFLGPLEKAEEXGVESI 144
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.133 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,452,127
Number of Sequences: 62578
Number of extensions: 1254551
Number of successful extensions: 3499
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 3249
Number of HSP's gapped (non-prelim): 70
length of query: 1001
length of database: 14,973,337
effective HSP length: 108
effective length of query: 893
effective length of database: 8,214,913
effective search space: 7335917309
effective search space used: 7335917309
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)