Query 001879
Match_columns 1001
No_of_seqs 248 out of 1175
Neff 4.0
Searched_HMMs 29240
Date Mon Mar 25 02:54:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001879.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001879hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ygp_A Yeast glycogen phosphor 100.0 2E-265 7E-270 2301.1 58.2 804 87-999 39-879 (879)
2 2gj4_A Glycogen phosphorylase, 100.0 2E-241 7E-246 2105.7 68.8 800 88-1001 12-822 (824)
3 1l5w_A Maltodextrin phosphoryl 100.0 4E-239 1E-243 2081.0 58.3 786 87-997 5-796 (796)
4 2c4m_A Glycogen phosphorylase; 100.0 1E-236 5E-241 2059.2 59.9 784 87-1001 4-794 (796)
5 3vue_A GBSS-I, granule-bound s 99.3 9.5E-12 3.3E-16 142.6 14.3 275 599-993 230-508 (536)
6 2qzs_A Glycogen synthase; glyc 97.7 0.00068 2.3E-08 74.3 15.9 138 712-879 280-424 (485)
7 3nb0_A Glycogen [starch] synth 97.6 0.00094 3.2E-08 79.9 16.6 219 600-869 250-559 (725)
8 1rzu_A Glycogen synthase 1; gl 97.6 0.0013 4.5E-08 72.0 16.7 185 712-991 280-471 (485)
9 3fro_A GLGA glycogen synthase; 96.8 0.0096 3.3E-07 63.1 13.0 135 713-879 243-378 (439)
10 2x6q_A Trehalose-synthase TRET 96.6 0.013 4.3E-07 62.9 12.5 134 720-879 227-364 (416)
11 3okp_A GDP-mannose-dependent a 96.6 0.018 6.2E-07 60.3 12.8 130 720-880 194-328 (394)
12 3s28_A Sucrose synthase 1; gly 96.5 0.011 3.8E-07 71.9 12.2 145 714-880 562-714 (816)
13 3oy2_A Glycosyltransferase B73 96.3 0.022 7.4E-07 60.8 11.8 125 723-869 183-314 (413)
14 3c48_A Predicted glycosyltrans 96.3 0.026 8.9E-07 60.6 12.3 137 720-880 239-375 (438)
15 2f9f_A First mannosyl transfer 96.1 0.013 4.3E-07 56.4 8.0 135 717-883 16-150 (177)
16 2r60_A Glycosyl transferase, g 96.0 0.027 9.2E-07 62.2 11.2 136 720-880 258-408 (499)
17 2bfw_A GLGA glycogen synthase; 96.0 0.018 6.1E-07 55.3 8.4 135 713-880 28-164 (200)
18 2jjm_A Glycosyl transferase, g 95.9 0.019 6.4E-07 61.0 9.0 128 720-880 207-334 (394)
19 2iw1_A Lipopolysaccharide core 95.6 0.045 1.5E-06 57.0 10.2 128 720-879 192-319 (374)
20 2gek_A Phosphatidylinositol ma 94.3 0.13 4.6E-06 54.1 9.4 125 723-879 207-332 (406)
21 2iuy_A Avigt4, glycosyltransfe 92.9 0.18 6.1E-06 52.5 7.4 129 723-884 161-297 (342)
22 3qhp_A Type 1 capsular polysac 89.9 1.2 3.9E-05 41.5 8.8 112 725-868 3-116 (166)
23 2vsy_A XCC0866; transferase, g 84.8 8.9 0.00031 42.9 13.7 104 726-858 378-482 (568)
24 1uqt_A Alpha, alpha-trehalose- 79.7 12 0.00042 42.6 12.5 142 723-880 254-403 (482)
25 1vgv_A UDP-N-acetylglucosamine 76.1 25 0.00086 36.7 12.7 64 808-881 264-328 (384)
26 3beo_A UDP-N-acetylglucosamine 75.5 11 0.00037 39.3 9.6 65 808-882 264-329 (375)
27 2x0d_A WSAF; GT4 family, trans 52.7 45 0.0015 36.7 9.4 68 808-880 296-363 (413)
28 1f0k_A MURG, UDP-N-acetylgluco 45.5 66 0.0022 33.3 8.9 103 721-861 180-283 (364)
29 3t5t_A Putative glycosyltransf 33.0 1.5E+02 0.005 34.5 9.9 137 724-880 281-422 (496)
30 2hy7_A Glucuronosyltransferase 28.4 1.7E+02 0.0058 31.8 9.0 106 725-880 223-336 (406)
No 1
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=100.00 E-value=1.9e-265 Score=2301.09 Aligned_cols=804 Identities=48% Similarity=0.821 Sum_probs=769.3
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCceEEEEEehhhhhhhhhHHHHHh
Q 001879 87 PDTASVASSIQYHAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGRALLNAIGN 166 (1001)
Q Consensus 87 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~Ala~svrd~l~~~W~~T~~~~~~~~~K~vyYlSmEfL~Gr~L~n~l~N 166 (1001)
.++++|+++|.+|+++++++++.+++..++|.|||.+|||+|+++|.+|++.|...+.|+||||||||||||+|.|||+|
T Consensus 39 ~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~vrd~l~~~W~~t~~~~~~~~~k~vyYlS~EFL~Gr~L~n~l~n 118 (879)
T 1ygp_A 39 NKAEDFQDRFIDHVETTLARSLYNCDDMVAYEAASMSIRDNLVIDWNKTQQKFTTRDPKRVYYLSLEFLMGRALDNALIN 118 (879)
T ss_dssp CSHHHHHHHHHHHHHTTSCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECSCCCCBCHHHHHHHS
T ss_pred cCHHHHHHHHHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCeEEEEchhhhhhhHHHHHHHh
Confidence 67789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcHHHH-------------HHHHHHhCCCHHHHHhcCCCCCCCCCCchhchhhhHhhhhccCCCeEEEeecCCCcceeE
Q 001879 167 LGLTGAY-------------AEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQ 233 (1001)
Q Consensus 167 Lgl~~~~-------------~eaL~~lG~~le~l~~~E~Da~LGnGGLGrLAacfLdS~AtL~~P~~GyGLrYkyG~FkQ 233 (1001)
|||++++ ++||++||++|++|+++|+||+|||||||||||||||||||||+|++||||||+||||+|
T Consensus 119 lg~~~~~~~~~~~~~~~~~~~~al~~lg~~l~~~~~~E~da~LGnGGLGrLAacfLdS~AtLglP~~GyGlrY~~G~F~Q 198 (879)
T 1ygp_A 119 MKIEDPEDPAASKGKPREMIKGALDELGFKLEDVLDQEPDAGLGNGGLGRLAACFVDSMATEGIPAWGYGLRYEYGIFAQ 198 (879)
T ss_dssp CCC------------CHHHHHHHHHHHTCCHHHHHTTCCCBCSCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEE
T ss_pred cCChhhhchhhccccchhHHHHHHHHcCCCHHHHHhcCCCCCcCCCcHHHHHHHHHHHHHhCCCCeEEEEeeecCCceEE
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCceeeecccccccCCCcccccCCceeeeecCCeeee--CC-CCCe--eeeCCeeEEEEEEeeccCCCCCCceEEEE
Q 001879 234 RITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVP--GS-DGKS--HWIGGEDIKAVAYDIPIPGYKTKTTINLR 308 (1001)
Q Consensus 234 ~I~dG~Q~E~pd~WL~~gnPwei~r~d~~~~V~f~G~v~~--~~-~G~~--~w~~~~~V~Av~yDvpI~Gy~~~~t~~LR 308 (1001)
+|.||||+|.||+||..|||||++|++.+|||+|+|+|+. +. +|+. .|++++.|+|||||+|||||+|+++|+||
T Consensus 199 ~i~dG~Q~E~pd~Wl~~g~pwe~~r~~~~~~V~f~G~v~~~~~~~~G~~~~~w~~~~~v~av~yD~Pi~Gy~~~~~n~lR 278 (879)
T 1ygp_A 199 KIIDGYQVETPDYWLNSGNPWEIERNEVQIPVTFYGYVDRPEGGKTTLSASQWIGGERVLAVAYDFPVPGFKTSNVNNLR 278 (879)
T ss_dssp EEETTEEEEECCCTTTTCCTTCEEEEEEEEEEEESCEEECC----CTTSCCEEECSEEEEEEEEEEEEECSSCCCEEEEE
T ss_pred EeeCCeeEEeccchhccCCcccccCCCceEEEeeCCEEeeccccCCCcceeEeeCCcEEEEEEccccccCcCCCceEEEE
Confidence 9999999999999999999999999999999999999983 34 6765 49999999999999999999999999999
Q ss_pred EEEecCCCCcccccccCCCchhHHHHhhhhcccccceeccCCCccccchhhhhhhhHHhhhhHHHHHHHHHHhcCccccc
Q 001879 309 LWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNW 388 (1001)
Q Consensus 309 LWst~v~~~~fdl~~fn~gd~~~a~~~~~~ae~It~vLYp~D~~~eGk~LRLkQeyfL~saslqdIirrf~~~~Gg~~~l 388 (1001)
||+++++. .|||..||.|||.+|++++..+|+||++|||+|++++||+|||||||||||||+|||||+|++.+| +|
T Consensus 279 LW~a~~~~-~f~l~~fn~gdy~~a~~~~~~~e~IT~vLYp~D~~~~GkeLRLkQEyfl~sa~lqdilr~~~~~~~---~l 354 (879)
T 1ygp_A 279 LWQARPTT-EFDLNKFNNGDYKNSVAQQQRAESITAVLYPNDNFAQGKELRLKQQYFWCAASLHDILRRFKKSKR---PW 354 (879)
T ss_dssp EEEEEESC-SCCHHHHHTTCHHHHTHHHHHHHHHHHSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---CG
T ss_pred EEEeccCc-ccchhhccCccHhHhhhChHhhhchhccCCCCCCCccchhhheehhhhhhhhHHHHHHHHHHHhCC---Ch
Confidence 99999665 899999999999999999999999999999999999999999999999999999999999999874 79
Q ss_pred ccCCCCceEEeCCCChhhhHHHHHHHHHHhcCCCHHHHHHHhccceeecccCCCCcccccCCHHHHHHhchhHHHHHHHH
Q 001879 389 EEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMI 468 (1001)
Q Consensus 389 ~~lp~kvaiqmNDtHPalaipELmRiLiD~~gl~w~eAw~it~~t~ayTnHT~lpEalEkw~~~L~~~lLPrh~eII~~I 468 (1001)
+.||++++|||||||||||||||||+|+|++|++|++||+||++||+||||||||||||+||++||+++||||++||++|
T Consensus 355 ~~l~~~~~ihlNDtHpalai~ELmR~L~d~~gl~wd~Aw~iv~~t~~yTnHT~lpealE~wpv~l~~~lLpr~~~II~ei 434 (879)
T 1ygp_A 355 TEFPDQVAIQLNDTHPTLAIVELQRVLVDLEKLDWHEAWDIVTKTFAYTNHTVMQEALEKWPRRLFGHLLPRHLEIIYDI 434 (879)
T ss_dssp GGHHHHEEEEEESSTTTHHHHHHHHHHHHTTCCCHHHHHHHHHHHEEEEECCCSGGGSCEEEHHHHHHHCHHHHHHHHHH
T ss_pred hhcCCceEEEccCCcHHHHHHHHHHHHhhhcCCCHHHHHHHHHHheeeecCcCchHhhccCCHHHHHHHCCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhhCCCCchhhHHHHhhhccccccCCchhhhhhhcccccCCCCCCCcccccccCCCCCChhhhhhhhcccc
Q 001879 469 DEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQEDGV 548 (1001)
Q Consensus 469 n~~f~~~i~~~~~~~~~~~~~~~l~~m~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (1001)
|.+|+..+..+||+ +.+++.+|+||+
T Consensus 435 n~~f~~~~~~~~~~-----d~~~~~~l~ii~------------------------------------------------- 460 (879)
T 1ygp_A 435 NWFFLEDVAKKFPK-----DVDLLSRISIIE------------------------------------------------- 460 (879)
T ss_dssp HHHHHHHHHHHSTT-----CTHHHHHHCSEE-------------------------------------------------
T ss_pred HHHHHHHHHHHcCC-----CHHHHHhcceec-------------------------------------------------
Confidence 99999999999998 889999999977
Q ss_pred cccccCCCCCCcccccccCCCCCCcccchhhhhhhhHHHHHhhhhcCCCCCeeeeeeeecccCCchhHHHHHHHHHHHHh
Q 001879 549 LEEESTDVVPDDELENCDEEGGPVDEELESEQEDDVLEEEKEAEAVQEPPQLVRMANLCVVGSHAVNGVAEIHSEIVTNE 628 (1001)
Q Consensus 549 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~vrMA~Lal~~Sh~VNGVS~lHseI~k~~ 628 (1001)
+ .+++++||||+||+++||+|||||+|||+|+|++
T Consensus 461 -------------------------------------------~--~~~~~~v~MA~LAi~~S~~vNGVs~LH~ev~k~~ 495 (879)
T 1ygp_A 461 -------------------------------------------E--NSPERQIRMAFLAIVGSHKVNGVVELHSELIKTT 495 (879)
T ss_dssp -------------------------------------------C--CSSSCEEEHHHHHHHHEEEEEESSHHHHHHHHHT
T ss_pred -------------------------------------------c--CCCcceeehHHHHHHhcCceeEehHHHHHHHHHH
Confidence 1 0223689999999999999999999999999999
Q ss_pred hhhhhhhhcCC-CcccccccccccccccccChhHHHHHHhhcCC--CccccCcchHHHhhhcCCCHHHHHHHHHHHHHHH
Q 001879 629 VFNEFYKLWPE-KFQNKTNGVTPRRWIRFCNPDLSSILTSWLGT--EDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNK 705 (1001)
Q Consensus 629 vf~df~~l~P~-kf~n~TNGVt~rrWl~~~Np~Ls~Lit~~iG~--~~W~~d~~~L~~l~~~~dd~~l~~~w~~~K~~nK 705 (1001)
+|++||++||+ ||+|||||||||||+.+|||+|++||+++||+ ++|.+++++|++|++|++|++|+++|+++|++||
T Consensus 496 ~f~df~~l~P~~kf~n~TNGVt~rrWl~~~Np~L~~Li~~~iG~~~~~W~~d~~~L~~l~~~~~D~~f~~~l~~iK~~nK 575 (879)
T 1ygp_A 496 IFKDFIKFYGPSKFVNVTNGITPRRWLKQANPSLAKLISETLNDPTEEYLLDMAKLTQLEKYVEDKEFLKKWNQVKLNNK 575 (879)
T ss_dssp TTHHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHTTCTTCGGGTCGGGGGGGGGGGGCTHHHHHHHHHHHHHH
T ss_pred HhHHHHHhCCCCcccCcCCCcCCchhhhhcCHHHHHHHHHhcCCChhhhhhCHHHHHHHHhhCCcHHHHHHHHHHHHHHH
Confidence 99999999999 99999999999999999999999999999993 4999999999999999999999999999999999
Q ss_pred HHHHHHHHHHc-CCcCC-----CCcceeccccccchhhhhhhhhhhHHHHHHHHHhcC------hhhhhccccceEEEEe
Q 001879 706 MKVVSFIKEKT-GYSVS-----PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMS------AVERKAKFVPRVCIFG 773 (1001)
Q Consensus 706 ~~L~~~Ik~~~-G~~vd-----pdslfdvqvKRiheYKRQlLNil~ii~ry~~ik~~~------~~~r~~~~~Pr~~IFg 773 (1001)
.+|++||++++ |+.|| |++|||||||||||||||+||+|+|++||++||+ + |....++++|||||||
T Consensus 576 ~~La~~i~~~~~g~~ld~~~~~p~sLfdvq~KR~heYKRq~LniL~ii~ry~~Ik~-~~~~~~~p~~~~~~~~P~~~IFa 654 (879)
T 1ygp_A 576 IRLVDLIKKENDGVDIINREYLDDTLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKN-MLKNGASIEEVARKYPRKVSIFG 654 (879)
T ss_dssp HHHHHHHHHTTTTCCCSCSTTGGGCEEEEEESCCCGGGTHHHHHHHHHHHHHHHHH-HHHTTCCHHHHHHHSCCEEEEEE
T ss_pred HHHHHHHHHHcCCcEecCCCCCCCeeeeeeeehhhHhHHHHHHHHHHHHHHHHHHh-CccccCCCcccccCCCCeEEEEe
Confidence 99999999999 99999 9999999999999999999999999999999998 5 5533245789999999
Q ss_pred ccCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccc
Q 001879 774 GKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGC 853 (1001)
Q Consensus 774 GKA~P~y~~AK~IIk~I~~va~~iN~Dp~i~~~LKVVFlpnYnVslAe~LipasDls~nistag~EASGTSnMKfamNG~ 853 (1001)
|||||+|.+||.|||+|++||++||+||+++++||||||||||||+||+||||||||+||||||+||||||||||||||+
T Consensus 655 GKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~LKVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMKfalNGa 734 (879)
T 1ygp_A 655 GKSAPGYYMAKLIIKLINCVADIVNNDESIEHLLKVVFVADYNVSKAEIIIPASDLSEHISTAGTEASGTSNMKFVMNGG 734 (879)
T ss_dssp CCCCTTCHHHHHHHHHHHHHHHHHTTCGGGTTSEEEEEETTCCHHHHHHHGGGCSEEEECCCTTCCSCCHHHHHHHTTTC
T ss_pred ccCCCCcHHHHHHHHHHHHHHHHhccChhhCCceEEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCchhhHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeeecccccccccccccccceEecccchhhhhhhhhccCCCCCCCChhHHHHHHHHhcCCCCcc---cHHHHHHHhccC
Q 001879 854 ILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSY---NYDELMGSLEGN 930 (1001)
Q Consensus 854 l~igTlDGanvEI~e~vG~eN~flFG~~~~ei~~l~~~~~~~~~~~~~~l~~v~~~i~~g~f~~~---~~~~L~~~L~~~ 930 (1001)
|||||||||||||+|+||+||+|+||++++||..+|++++...|..+|.+++|+|+|.+|.|++. +|++||++|+.+
T Consensus 735 LtlgtlDGanvEi~e~vG~eN~fiFG~~~~ev~~~~~~~~~~~y~~~~~l~~v~d~i~~g~f~~~~~~~f~~l~~~L~~~ 814 (879)
T 1ygp_A 735 LIIGTVDGANVEITREIGEDNVFLFGNLSENVEELRYNHQYHPQDLPSSLDSVLSYIESGQFSPENPNEFKPLVDSIKYH 814 (879)
T ss_dssp EEEEESCTHHHHHHHHHCGGGSEEESCCHHHHHHHHHHHHHSCCCCCHHHHHHHHHTC--CCCTTSTTTTHHHHHHHHHS
T ss_pred eeeecccchhHHHHHHcCcccEEEccCCHHHHHHHHHhCchhccCCCHHHHHHHHHHhcCCCCCCChHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999877778899999999999999999754 499999999865
Q ss_pred CCCCCCcccccccchhHHHHHHHHHHHHhcCHh-HHHHHHHHhhhcCCCCChHHHHHHHHHHHhcccccC
Q 001879 931 EGFGQADYFLVGKDFPSYLECQEKVDEAYCDQK-RWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVE 999 (1001)
Q Consensus 931 ~~~~~~D~~~v~~Df~sY~~~q~~V~~~Y~d~~-~W~~~~i~niA~sg~FSSDRtI~eYa~~IW~i~p~~ 999 (1001)
+|+|||++||+||++||++|+++|+|++ +|++|||+|||+||+|||||||+|||++||+++|++
T Consensus 815 -----~D~y~vl~Df~sY~~~q~~v~~~Y~d~~~~W~~~~i~NiA~~G~FSSDRtI~eYa~~IW~~~p~~ 879 (879)
T 1ygp_A 815 -----GDYYLVSDDFESYLATHELVDQEFHNQRSEWLKKSVLSLANVGFFSSDRCIEEYSDTIWNVEPVT 879 (879)
T ss_dssp -----TTTTCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHGGGBHHHHHHHHHHHTTCCCCC-
T ss_pred -----CCeEEEeccHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHhcCccCchHHHHHHHHHhhCCCCCC
Confidence 7999999999999999999999999999 999999999999999999999999999999999964
No 2
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=100.00 E-value=2e-241 Score=2105.72 Aligned_cols=800 Identities=45% Similarity=0.813 Sum_probs=757.6
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCceEEEEEehhhhhhhhhHHHHHhc
Q 001879 88 DTASVASSIQYHAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGRALLNAIGNL 167 (1001)
Q Consensus 88 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~Ala~svrd~l~~~W~~T~~~~~~~~~K~vyYlSmEfL~Gr~L~n~l~NL 167 (1001)
++++|+++|.+|+++++++++..+++.++|.|||.+|||+|+++|.+|++.|...++|+||||||||||||+|.|||+||
T Consensus 12 ~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~vrd~~~~~w~~t~~~~~~~~~k~vyYlS~Efl~gr~L~n~l~nl 91 (824)
T 2gj4_A 12 NVTELKKNFNRHLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYMGRTLQNTMVNL 91 (824)
T ss_dssp HHHHHHHHHHHHHHHTTCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECSCEEEECCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEchhhcchhhhHHHHHHC
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHhCCCHHHHHhcCCCCCCCCCCchhchhhhHhhhhccCCCeEEEeecCCCcceeEEEeCCceeeecccc
Q 001879 168 GLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDW 247 (1001)
Q Consensus 168 gl~~~~~eaL~~lG~~le~l~~~E~Da~LGnGGLGrLAacfLdS~AtL~~P~~GyGLrYkyG~FkQ~I~dG~Q~E~pd~W 247 (1001)
||++++++||++||++|++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|+||||+|.||+|
T Consensus 92 g~~~~~~~~l~~~g~~l~~i~~~E~d~~LgnGGLGrLAacfldS~AtL~~P~~G~Gi~Y~~G~F~Q~i~dG~Q~E~~d~W 171 (824)
T 2gj4_A 92 ALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKICGGWQMEEADDW 171 (824)
T ss_dssp TCHHHHHHHHHHTTCCHHHHHTTSCCEEECCSHHHHHHHHHHHHHHHTTCCEEEEEECCSBCSCEEEEETTEEEEECCCT
T ss_pred CCHHHHHHHHHHhCCCHHHHHhcCCCcCcCCCcHHHHHHHHHHHHHhCCCCeEEEeecccCCCeeEEeeCCEEEEcCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCcccccCCceeeeecCCeeeeCCCCCeeeeCCeeEEEEEEeeccCCCCCCceEEEEEEEecCCCCcccccccCCC
Q 001879 248 LELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAG 327 (1001)
Q Consensus 248 L~~gnPwei~r~d~~~~V~f~G~v~~~~~G~~~w~~~~~V~Av~yDvpI~Gy~~~~t~~LRLWst~v~~~~fdl~~fn~g 327 (1001)
|..|||||++|++.++||+|+|+|+.+.+|. .|++++.|+|||||+|||||+|++||+||||+++ ++++|||..||.|
T Consensus 172 l~~~~pwe~~r~~~~~~V~f~g~v~~~~~g~-~w~~~~~v~av~yD~pi~Gy~~~~vn~lRlW~a~-~~~~f~~~~fn~G 249 (824)
T 2gj4_A 172 LRYGNPWEKARPEFTLPVHFYGRVEHTSQGA-KWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAK-APNDFNLKDFNVG 249 (824)
T ss_dssp TTTCCTTCEECGGGCEEEEESCEEEECSSSE-EEESCEEEEEEEEEEEEECSSSSCEEEEEEEEEE-CCC----------
T ss_pred cccCCcccccCCCceEEEEeCCEEEecCCCc-eecccceEEEeeccCCcCCCCCCceEEEEEEEee-cCcccchhhccCc
Confidence 9999999999999999999999998767783 7999999999999999999999999999999999 6778999999999
Q ss_pred chhHHHHhhhhcccccceeccCCCccccchhhhhhhhHHhhhhHHHHHHHHHHhcCcc-----cccccCCCCceEEeCCC
Q 001879 328 DHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGAN-----VNWEEFPEKVAVQMNDT 402 (1001)
Q Consensus 328 d~~~a~~~~~~ae~It~vLYp~D~~~eGk~LRLkQeyfL~saslqdIirrf~~~~Gg~-----~~l~~lp~kvaiqmNDt 402 (1001)
+|..|+.++..+|+||++|||+|++++||+|||||||||||||+|||||+|++.+.|. .+|+.||++++||||||
T Consensus 250 ~~~~a~~d~~~~enIt~~LYp~D~~~~Gk~lRL~Qeyf~~sa~lqdilr~~~~~~~g~~~~~~~~~~~~~~p~viHlNDt 329 (824)
T 2gj4_A 250 GYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTNFDAFPDKVAIQLNDT 329 (824)
T ss_dssp CHHHHHHTHHHHHGGGSBCCCCSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHC-----------CGGGHHHHEEEEEESS
T ss_pred cHHHHHhcccchhhcCcCCCCCCCccchHhHhhhhhhhhhhhHHHHHHHHHHHhccccccccccchhhcCCCcEEEccCC
Confidence 9999999999999999999999999999999999999999999999999999765222 37999999999999999
Q ss_pred ChhhhHHHHHHHHHHhcCCCHHHHHHHhccceeecccCCCCcccccCCHHHHHHhchhHHHHHHHHhHHHHHHHHHhhCC
Q 001879 403 HPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGT 482 (1001)
Q Consensus 403 HPalaipELmRiLiD~~gl~w~eAw~it~~t~ayTnHT~lpEalEkw~~~L~~~lLPrh~eII~~In~~f~~~i~~~~~~ 482 (1001)
||||++|||||+|+|++|++|++||++|+++|+||||||+|||+|+||++||+++||||++||++||++|+..+..++|+
T Consensus 330 Hpal~i~ElmR~l~d~~~l~~d~A~~i~~~~~vfT~HTl~~eglE~wp~~l~~~lLPr~~~ii~~in~~f~~~~~~~~~~ 409 (824)
T 2gj4_A 330 HPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPG 409 (824)
T ss_dssp TTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECCCCCGGGSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred chHhHHHHHHHHHHHhcCCCHHHHHHHhcCcEEEEeCCChHHHhhhchHHHHHHhCchHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCchhhHHHHhhhccccccCCchhhhhhhcccccCCCCCCCcccccccCCCCCChhhhhhhhcccccccccCCCCCCccc
Q 001879 483 ADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQEDGVLEEESTDVVPDDEL 562 (1001)
Q Consensus 483 ~~~~~~~~~l~~m~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (1001)
+.+++.+|++++
T Consensus 410 -----~~~~~~~~~~i~--------------------------------------------------------------- 421 (824)
T 2gj4_A 410 -----DVDRLRRMSLVE--------------------------------------------------------------- 421 (824)
T ss_dssp -----CHHHHHHHCSEE---------------------------------------------------------------
T ss_pred -----cHHHHHhhhhhh---------------------------------------------------------------
Confidence 788999999877
Q ss_pred ccccCCCCCCcccchhhhhhhhHHHHHhhhhcCCCCCeeeeeeeecccCCchhHHHHHHHHHHHHhhhhhhhhhcCCCcc
Q 001879 563 ENCDEEGGPVDEELESEQEDDVLEEEKEAEAVQEPPQLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQ 642 (1001)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~vrMA~Lal~~Sh~VNGVS~lHseI~k~~vf~df~~l~P~kf~ 642 (1001)
+ +.++.||||+|||++||+|||||++|++++|+.+|++|+++||+||+
T Consensus 422 -----------------------------~---~~~~~vnMa~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~ 469 (824)
T 2gj4_A 422 -----------------------------E---GAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQ 469 (824)
T ss_dssp -----------------------------C---SSSCEEEHHHHHHHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEE
T ss_pred -----------------------------h---cCCCcccHHHHHHHhcCceeeEcHHHHHHHhhHHhHHHHHcChhhcc
Confidence 1 22468999999999999999999999999999999999999999999
Q ss_pred cccccccccccccccChhHHHHHHhhcCCCccccCcchHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCCC
Q 001879 643 NKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSP 722 (1001)
Q Consensus 643 n~TNGVt~rrWl~~~Np~Ls~Lit~~iG~~~W~~d~~~L~~l~~~~dd~~l~~~w~~~K~~nK~~L~~~Ik~~~G~~vdp 722 (1001)
|||||||+|||+.+|||+++++|++.||+ +|.+++++|++|.+|++|++|+++|+++|++||.+|+++|++++|..+||
T Consensus 470 ~iTNGI~~rrWl~~~NP~l~~lI~~~ig~-~W~~~~~~l~~L~~y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdp 548 (824)
T 2gj4_A 470 NKTNGITPRRWLVLCNPGLAEIIAERIGE-EYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINP 548 (824)
T ss_dssp ECCCCBCTCCCCCCTCHHHHHHHHHHHCS-GGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCT
T ss_pred cccCCcChhhhcccCCHhHHHHHHHhcCc-hhhhCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCC
Confidence 99999999999999999999999999996 99999999999999999999999999999999999999999999999999
Q ss_pred CcceeccccccchhhhhhhhhhhHHHHHHHHHhcChhhhhccccceEEEEeccCCCCcHHHHHHHHHHHHHhhhhcCCcC
Q 001879 723 DAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPE 802 (1001)
Q Consensus 723 dslfdvqvKRiheYKRQlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFgGKA~P~y~~AK~IIk~I~~va~~iN~Dp~ 802 (1001)
++|||+|||||||||||+||+|++++||.+|++ +|.. .++|+||||||||||+|.+||.|||+|+++|+++|+||+
T Consensus 549 d~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~-~~~~---~~~p~q~If~GKA~P~y~~aK~iIkli~~va~~in~Dp~ 624 (824)
T 2gj4_A 549 NSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKK-EPNK---FVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPV 624 (824)
T ss_dssp TSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHH-CTTS---CCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTT
T ss_pred CcceEeeeecchhhcchhhHHHHHHHHHHHHHh-CCCC---CCCCEEEEEEEeCCHhHHHHHHHHHHHHHHHHHhccCcc
Confidence 999999999999999999999999999999998 6553 378999999999999999999999999999999999999
Q ss_pred CCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEecccch
Q 001879 803 IGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARA 882 (1001)
Q Consensus 803 i~~~LKVVFlpnYnVslAe~LipasDls~nistag~EASGTSnMKfamNG~l~igTlDGanvEI~e~vG~eN~flFG~~~ 882 (1001)
++++|||||+|||||++|++|+||||||+||||||+||||||||||||||+|+|||||||||||+++||++|+|+||.++
T Consensus 625 v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDGanvEi~e~vG~~Ngf~FG~~~ 704 (824)
T 2gj4_A 625 VGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRV 704 (824)
T ss_dssp TGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCCH
T ss_pred cCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecCccchhhhccCCCCEEEeCCcH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhccCCC---CCCCChhHHHHHHHHhcCCCCcc---cHHHHHHHhccCCCCCCCcccccccchhHHHHHHHHHH
Q 001879 883 HEIAGLRKERSEG---KFVPDARFEEVKKFVKSGVFGSY---NYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVD 956 (1001)
Q Consensus 883 ~ei~~l~~~~~~~---~~~~~~~l~~v~~~i~~g~f~~~---~~~~L~~~L~~~~~~~~~D~~~v~~Df~sY~~~q~~V~ 956 (1001)
+|+..++.++ +. .|..+|.+++|++.+.+|.|+.. .|.+||++|.. +|+|||++||+||++||++|+
T Consensus 705 ~ev~~l~~~~-~~a~~~Y~~~~~l~~v~d~i~~g~fs~~~~~~y~~ly~~l~~------~D~~~~~~Df~~y~~~q~~v~ 777 (824)
T 2gj4_A 705 EDVDRLDQRG-YNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMH------HDRFKVFADYEEYVKCQERVS 777 (824)
T ss_dssp HHHHHHHHHC-CCHHHHHHHCHHHHHHHHHHHHTTTCTTSTTTTHHHHHHHHH------CCTTCTGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHcC-CCHHHHhcCCHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHc------CChhhhhhhHHHHHHHHHHHH
Confidence 9998887665 33 36788999999999999999754 49999999986 599999999999999999999
Q ss_pred HHhcCHhHHHHHHHHhhhcCCCCChHHHHHHHHHHHhcccccCCC
Q 001879 957 EAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP 1001 (1001)
Q Consensus 957 ~~Y~d~~~W~~~~i~niA~sg~FSSDRtI~eYa~~IW~i~p~~~p 1001 (1001)
.+|.|+++|++||+.|||.+|+|||||||+|||++||+++|++.|
T Consensus 778 ~~y~d~~~W~~~~~~nia~~g~FssdRtI~eY~~~iw~~~~~~~~ 822 (824)
T 2gj4_A 778 ALYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSRQR 822 (824)
T ss_dssp HHHTCHHHHHHHHHHHHTTCGGGBHHHHHHHHHHHTTCCCCCCCC
T ss_pred HhhcCHHHHHHHHHHHHHHhCCcCcHHHHHHHHHHHhCCCCCCCC
Confidence 999999999999999999999999999999999999999998765
No 3
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=100.00 E-value=3.6e-239 Score=2081.02 Aligned_cols=786 Identities=42% Similarity=0.732 Sum_probs=759.0
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCceEEEEEehhhhhhhhhHHHHHh
Q 001879 87 PDTASVASSIQYHAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGRALLNAIGN 166 (1001)
Q Consensus 87 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~Ala~svrd~l~~~W~~T~~~~~~~~~K~vyYlSmEfL~Gr~L~n~l~N 166 (1001)
.++++|+++|.+|+++++++++..++..++|.|||.+|||+|.++|.+|++ .+.|+|||||||||+||+|.|||+|
T Consensus 5 ~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~~rd~l~~~w~~t~~----~~~k~v~Y~S~Efl~gr~L~n~l~n 80 (796)
T 1l5w_A 5 FNDKQFQEALSRQWQRYGLNSAAEMTPRQWWLAVSEALAEMLRAQPFAKPV----ANQRHVNYISMEFLIGRLTGNNLLN 80 (796)
T ss_dssp CCHHHHHHHHHHHHHHTTCSSGGGCCHHHHHHHHHHHHHHHHHTSCCCCCC----SSCCEEEEECSCCCCCCCHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHhCCChHhCCHHHHHHHHHHHHHHHHHHHHHHhcc----cCCceEEEEehHHhHHHHHHHHHHh
Confidence 578899999999999999999999999999999999999999999999996 5689999999999999999999999
Q ss_pred cCcHHHHHHHHHHhCCCHHHHHhcCCCCCCCCCCchhchhhhHhhhhccCCCeEEEeecCCCcceeEEEeCCceeeeccc
Q 001879 167 LGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAED 246 (1001)
Q Consensus 167 Lgl~~~~~eaL~~lG~~le~l~~~E~Da~LGnGGLGrLAacfLdS~AtL~~P~~GyGLrYkyG~FkQ~I~dG~Q~E~pd~ 246 (1001)
|||++++++||++||++|++|+++|+||+|||||||||||||||||||||+|++||||||+||||+|+|.||||+|.|++
T Consensus 81 lg~~~~~~~~l~~~g~~l~~~~~~E~d~~LgnGGLGrLAacfldS~a~l~~p~~G~Gi~Y~~G~F~Q~i~dG~Q~E~~d~ 160 (796)
T 1l5w_A 81 LGWYQDVQDSLKAYDINLTDLLEEEIDPALGNGGLGRLAACFLDSMATVGQSATGYGLNYQYGLFRQSFVDGKQVEAPDD 160 (796)
T ss_dssp HTCHHHHHHHHHTTTCCHHHHHTTCCCCCCCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEEETTEEEEECCC
T ss_pred cCcHHHHHHHHHHcCCCHHHHHhcCCCcCcCCCcHHHHHHHHHHHHHhCCCCeEEEeeeecCCceeEEecCCeeEEecCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcccccCCceeeeecCCeeeeCCCCCeeeeCCeeEEEEEEeeccCCCCCCceEEEEEEEecCCCCcccccccCC
Q 001879 247 WLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNA 326 (1001)
Q Consensus 247 WL~~gnPwei~r~d~~~~V~f~G~v~~~~~G~~~w~~~~~V~Av~yDvpI~Gy~~~~t~~LRLWst~v~~~~fdl~~fn~ 326 (1001)
|+..|||||++|++++|+|+|+|+|+. + + +|++++.|+|||||+|||||+|+++|+||||+++++. .|||..||.
T Consensus 161 wl~~~~pwe~~r~~~~~~V~f~g~~~~--~-~-~w~~~~~v~av~yd~pi~Gy~~~~~n~lrlW~a~~~~-~f~l~~fn~ 235 (796)
T 1l5w_A 161 WHRSNYPWFRHNEALDVQVGIGGKVTK--D-G-RWEPEFTITGQAWDLPVVGYRNGVAQPLRLWQATHAH-PFDLTKFND 235 (796)
T ss_dssp CCGGGCTTCEECGGGCEEEEESCEECT--T-S-CEECSEEEEEEEEEEEEECSSSCCEEEEEEEEEECSS-CCCHHHHHT
T ss_pred cccCCCcceeecCCcEEEEeeCCEEee--c-c-eecCCceEEEEEecccccCCCCCceEEEEEEEeccCc-ccChhhcCC
Confidence 999999999999999999999999984 3 4 7999999999999999999999999999999999665 799999999
Q ss_pred CchhHHHHhhhhcccccceeccCCCccccchhhhhhhhHHhhhhHHHHHHHHHHhcCcccccccCCCCceEEeCCCChhh
Q 001879 327 GDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTL 406 (1001)
Q Consensus 327 gd~~~a~~~~~~ae~It~vLYp~D~~~eGk~LRLkQeyfL~saslqdIirrf~~~~Gg~~~l~~lp~kvaiqmNDtHPal 406 (1001)
|||.+|++++..+|+||++|||+|++++||+||||||||||+||+|+|+++|++.++ +|+.||++++||||||||||
T Consensus 236 gdy~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qe~ff~~a~lq~ilr~~~~~~~---~~~~l~~p~viHlNDtHpal 312 (796)
T 1l5w_A 236 GDFLRAEQQGINAEKLTKVLYPNDNAFEGKKLRLMQQYFQCACSVADILRRHHLAGR---KLHELADYEVIQLNDTHPTI 312 (796)
T ss_dssp TCTTGGGHHHHHHHGGGTCSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---CGGGHHHHEEEEEESSTTTT
T ss_pred ccHhhhhhchHhHhhhhhcCcCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHcCC---ChhhcCCccEEEecCCccHh
Confidence 999999999999999999999999999999999999999999999999999999874 79999999999999999999
Q ss_pred hHHHHHHHHHHhcCCCHHHHHHHhccceeecccCCCCcccccCCHHHHHHhchhHHHHHHHHhHHHHHHHHHhhCCCCch
Q 001879 407 CIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPD 486 (1001)
Q Consensus 407 aipELmRiLiD~~gl~w~eAw~it~~t~ayTnHT~lpEalEkw~~~L~~~lLPrh~eII~~In~~f~~~i~~~~~~~~~~ 486 (1001)
++|||||+|+|++|++|++||+||+++|+||||||+|||+|+||++||+++||||++||++||.+|++++..+||.
T Consensus 313 ~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~f~~~~~~~~~~---- 388 (796)
T 1l5w_A 313 AIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPG---- 388 (796)
T ss_dssp HHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSTT----
T ss_pred HHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCCcHhhhhcCCHHHHHHHhHHHHHHHhccCHHHHHHHHHhcCC----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhHHHHhhhccccccCCchhhhhhhcccccCCCCCCCcccccccCCCCCChhhhhhhhcccccccccCCCCCCccccccc
Q 001879 487 LLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQEDGVLEEESTDVVPDDELENCD 566 (1001)
Q Consensus 487 ~~~~~l~~m~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (1001)
+.+++.+|++++
T Consensus 389 -~~~~~~~~~i~~------------------------------------------------------------------- 400 (796)
T 1l5w_A 389 -DEKVWAKLAVVH------------------------------------------------------------------- 400 (796)
T ss_dssp -CHHHHHHHCSEE-------------------------------------------------------------------
T ss_pred -cHHHHhhhhccc-------------------------------------------------------------------
Confidence 889999999855
Q ss_pred CCCCCCcccchhhhhhhhHHHHHhhhhcCCCCCeeeeeeeecccCCchhHHHHHHHHHHHHhhhhhhhhhcCCCcccccc
Q 001879 567 EEGGPVDEELESEQEDDVLEEEKEAEAVQEPPQLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTN 646 (1001)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~vrMA~Lal~~Sh~VNGVS~lHseI~k~~vf~df~~l~P~kf~n~TN 646 (1001)
+ +.||||+|||++||+|||||++|++++|+.+|++|+++||+||+||||
T Consensus 401 -------------------------~------~~vnMa~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTN 449 (796)
T 1l5w_A 401 -------------------------D------KQVHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTN 449 (796)
T ss_dssp -------------------------T------TEEEHHHHHHHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCC
T ss_pred -------------------------C------CcccHHHHHHHhcCccccccHHHHHHHHhHHhhHHHHhCccccCCCcC
Confidence 2 479999999999999999999999999999999999999999999999
Q ss_pred cccccccccccChhHHHHHHhhcCCCccccCcchHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCCCCcce
Q 001879 647 GVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMF 726 (1001)
Q Consensus 647 GVt~rrWl~~~Np~Ls~Lit~~iG~~~W~~d~~~L~~l~~~~dd~~l~~~w~~~K~~nK~~L~~~Ik~~~G~~vdpdslf 726 (1001)
|||+|||+.+|||+|+++|++.+|+ +|++|+++|++|.++++|++|+++|+++|++||.+|++||++++|..+||++||
T Consensus 450 GI~~rrWl~~~NP~l~~li~~~~g~-~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~ 528 (796)
T 1l5w_A 450 GITPRRWIKQCNPALAALLDKSLQK-EWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIF 528 (796)
T ss_dssp CBCHHHHTTTTCHHHHHHHHHHCSS-CCTTCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEE
T ss_pred CCcHHHhhcccCHhHHHHHHHhcCc-ccccCHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcce
Confidence 9999999999999999999999995 999999999999999999999999878999999999999999999999999999
Q ss_pred eccccccchhhhhhhhhhhHHHHHHHHHhcChhhhhccccceEEEEeccCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCc
Q 001879 727 DIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDL 806 (1001)
Q Consensus 727 dvqvKRiheYKRQlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFgGKA~P~y~~AK~IIk~I~~va~~iN~Dp~i~~~ 806 (1001)
|+|||||||||||+||+|++++||.+||+ +|... ++|+||||||||||+|.+||.|||+|+++|++||+||+++++
T Consensus 529 ~~~vkRl~eYKRq~Lnil~ii~~~~~i~~-~~~~~---~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~Dp~~~~~ 604 (796)
T 1l5w_A 529 DIQIKRLHEYKRQHLNLLHILALYKEIRE-NPQAD---RVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDK 604 (796)
T ss_dssp EEEESCCCGGGTHHHHHHHHHHHHHHHHT-CTTCC---CCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGG
T ss_pred EeeeecchhhcccCEeHHHHHHHHHHHhc-CCCCC---CCCeEEEEEecCChhHHHHHHHHHHHHHHHHHhccccccCCc
Confidence 99999999999999999999999999998 66643 789999999999999999999999999999999999999999
Q ss_pred ceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEecccchhhhh
Q 001879 807 LKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIA 886 (1001)
Q Consensus 807 LKVVFlpnYnVslAe~LipasDls~nistag~EASGTSnMKfamNG~l~igTlDGanvEI~e~vG~eN~flFG~~~~ei~ 886 (1001)
|||||+|||||++|++|+||||||+||||||+||||||||||||||+|+|||||||||||.|++|++|+|+||.+++||.
T Consensus 605 lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~NgF~FG~~~~ev~ 684 (796)
T 1l5w_A 605 LKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVEQVK 684 (796)
T ss_dssp EEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCCHHHHH
T ss_pred eEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCCeeeehhhccCCCcEEEecCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccCCCC---CCCChhHHHHHHHHhcCCCCcc---cHHHHHHHhccCCCCCCCcccccccchhHHHHHHHHHHHHhc
Q 001879 887 GLRKERSEGK---FVPDARFEEVKKFVKSGVFGSY---NYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYC 960 (1001)
Q Consensus 887 ~l~~~~~~~~---~~~~~~l~~v~~~i~~g~f~~~---~~~~L~~~L~~~~~~~~~D~~~v~~Df~sY~~~q~~V~~~Y~ 960 (1001)
.+|..+ +.+ |..+|.++++++.+.+|.|+.. +|.+||++|..+ .+|+|+|++||+||++||++|+.+|+
T Consensus 685 ~l~~~~-y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~~~y~~Ly~~L~~~----~~D~~~v~~Df~~y~~~q~~v~~~Y~ 759 (796)
T 1l5w_A 685 AILAKG-YDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLHSIGKQ----GGDPYLVMADFAAYVEAQKQVDVLYR 759 (796)
T ss_dssp HHHHHC-CCHHHHHHHCHHHHHHHHHHHHTTTTTTCTTTTHHHHHHTSTT----TCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcc-cCHHHHhhcCHHHHHHHHHHHcCCCCCCcHHHHHHHHHHHhcc----CCCceeehhhHHHHHHHHHHHHHHhh
Confidence 999876 332 6678899999999999999754 499999999851 15999999999999999999999999
Q ss_pred CHhHHHHHHHHhhhcCCCCChHHHHHHHHHHHhcccc
Q 001879 961 DQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIP 997 (1001)
Q Consensus 961 d~~~W~~~~i~niA~sg~FSSDRtI~eYa~~IW~i~p 997 (1001)
|+++|++|||+|||+||+|||||||+|||++||+++|
T Consensus 760 d~~~W~~~~i~nia~~g~FssdRti~eY~~~iw~~~P 796 (796)
T 1l5w_A 760 DQEAWTRAAILNTARCGMFSSDRSIRDYQARIWQAKR 796 (796)
T ss_dssp SHHHHHHHHHHHHHHCGGGBHHHHHHHHHHHTTTSCC
T ss_pred CHHHHHHHHHHHHHhcCccCchHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999987
No 4
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=100.00 E-value=1.3e-236 Score=2059.16 Aligned_cols=784 Identities=42% Similarity=0.708 Sum_probs=750.1
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCceEEEEEehhhhhhhhhHHHHHh
Q 001879 87 PDTASVASSIQYHAEFTPLFSPEKFEPPKAFFATAQSVRDSLIINWNSTYEYYERLNVKQAYYLSMEFLQGRALLNAIGN 166 (1001)
Q Consensus 87 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~Ala~svrd~l~~~W~~T~~~~~~~~~K~vyYlSmEfL~Gr~L~n~l~N 166 (1001)
.++++|+++|.+|+++++++++..++..++|.|||.+|||+|.++|.+|++.|... |+|||||||||+||+|.|||+|
T Consensus 4 ~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~vrd~l~~~w~~t~~~~~~~--k~v~Y~S~Efl~gr~L~n~l~n 81 (796)
T 2c4m_A 4 EKQPLPAALVGSHVRAAAGTPADLATDRKFWTGLSRAVQERIADDWERTREAYGAA--RQQHYFSAEFLMGRALLNNLTN 81 (796)
T ss_dssp --CCSCHHHHHHHHHHHHSSCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS--CEEEEECSCCCCBCSHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHhCCChHHCCHHHHHHHHHHHHHHHHHHHHHHhhhhhccC--CeEEEEehhhcchhhhhhHHHh
Confidence 45668999999999999999999999999999999999999999999999988754 9999999999999999999999
Q ss_pred cCcHHHHHHHHHHhCCCHHHHHhcCCCCCCCCCCchhchhhhHhhhhccCCCeEEEeecCCCcceeEEEeCCceeeeccc
Q 001879 167 LGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAED 246 (1001)
Q Consensus 167 Lgl~~~~~eaL~~lG~~le~l~~~E~Da~LGnGGLGrLAacfLdS~AtL~~P~~GyGLrYkyG~FkQ~I~dG~Q~E~pd~ 246 (1001)
|||++++++||++||++|++|+++|+||+|||||||||||||||||||||+|++||||||+||||+|+|.||||+|.|++
T Consensus 82 lg~~~~~~~~l~~~g~~l~~~~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~G~Gl~Y~~G~F~Q~i~dG~Q~E~~d~ 161 (796)
T 2c4m_A 82 LGLVDEAAAATRELGHELTDILEIENDAALGNGGLGRLAACFLDSAVTQDYPVTGYGLLYRFGLFRQSFNEGFQVEKPDP 161 (796)
T ss_dssp TTCHHHHHHHHHHTTCCHHHHHTTCCCBCCCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEEETTEEEEECCC
T ss_pred cccHHHHHHHHHHcCCCHHHHHhhccccccCCCcHHHHHHHHHHHHHhCCCCeEEEeecccCCCeEEEeeCCEEEeeCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcccccCCceeeeecCCeeeeCCCCCeeeeCCeeEEEEEEeeccCCCCCCceEEEEEEEecCCCCcccccccCC
Q 001879 247 WLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNA 326 (1001)
Q Consensus 247 WL~~gnPwei~r~d~~~~V~f~G~v~~~~~G~~~w~~~~~V~Av~yDvpI~Gy~~~~t~~LRLWst~v~~~~fdl~~fn~ 326 (1001)
|+..|||||++|++.+|+|+|+|+ .|+|||||+|||||+|+++|+||||+++++ ..|||..||.
T Consensus 162 wl~~g~pwe~~r~~~~~~V~f~g~---------------~v~a~~yd~pi~gy~~~~~n~lrlW~a~~~-~~f~l~~fn~ 225 (796)
T 2c4m_A 162 WREEEYPFTIRRASDQLVVCFDDM---------------KTRAIPYDMPITGYGTHNVGTLRLWKAEPW-EEFDYDAFNA 225 (796)
T ss_dssp SSSSCCTTSEECGGGCEEEEETTE---------------EEEEEEEEEEECCTTCCCCEEEEEEEEEES-SSSCHHHHHT
T ss_pred cccCCCceeEecCCcEEEEEeCCE---------------EEEEEEEeccccCcCCCceEEEEEEecccc-cccchhhccC
Confidence 999999999999999999999985 478999999999999999999999999954 4899999999
Q ss_pred CchhHHHHhhhhcccccceeccCCCccccchhhhhhhhHHhhhhHHHHHHHHHHhcCcccccccCCCCceEEeCCCChhh
Q 001879 327 GDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTL 406 (1001)
Q Consensus 327 gd~~~a~~~~~~ae~It~vLYp~D~~~eGk~LRLkQeyfL~saslqdIirrf~~~~Gg~~~l~~lp~kvaiqmNDtHPal 406 (1001)
|||.+|+++++.+|+||++|||+|++++||+||||||||||+||+|||+++|++.+| +|+.||++++||||||||||
T Consensus 226 gdy~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qe~ff~~a~lq~ilr~~~~~~~---~l~~l~~p~viHlNDtHpal 302 (796)
T 2c4m_A 226 QRFTDAIIERERVSDICRVLYPNDTTYEGKKLRVRQQYFFTSASLQAMIQDHLAHHK---DLSNFAEFHSVQLNDTHPVL 302 (796)
T ss_dssp TCHHHHHHHHHHHHHHHHSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS---CSTTHHHHEEEEEESSTTTT
T ss_pred cchhhhhhchHhhhchhhcCcCCCCCcchHHHHHHhHHHHHHHHHHHHHHHHHHhCC---ChhhcCCCeEEEeCCChHHh
Confidence 999999999999999999999999999999999999999999999999999999874 69999999999999999999
Q ss_pred hHHHHHHHHHHhcCCCHHHHHHHhccceeecccCCCCcccccCCHHHHHHhchhHHHHHHHHhHHHHHHHHHhhCCCCch
Q 001879 407 CIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPD 486 (1001)
Q Consensus 407 aipELmRiLiD~~gl~w~eAw~it~~t~ayTnHT~lpEalEkw~~~L~~~lLPrh~eII~~In~~f~~~i~~~~~~~~~~ 486 (1001)
++|||||+|+|++|++|++||+||+++|+||||||+|||+|+||++||+++||||++||++||.+|+.++..+ |+
T Consensus 303 ~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~~~~~~~~~-~~---- 377 (796)
T 2c4m_A 303 AIPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQWDEQIFQQLFWRVWEIIAEIDRRFRLERAAD-GL---- 377 (796)
T ss_dssp HHHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHT-TC----
T ss_pred HHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCchHHHhhhCCHHHHHHHhHHHHHHHcCcCHHHHHHHHhc-CC----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 88
Q ss_pred hhHHHHhhhccccccCCchhhhhhhcccccCCCCCCCcccccccCCCCCChhhhhhhhcccccccccCCCCCCccccccc
Q 001879 487 LLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQEDGVLEEESTDVVPDDELENCD 566 (1001)
Q Consensus 487 ~~~~~l~~m~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (1001)
+++++.+|++++
T Consensus 378 -~~~~~~~~~i~~------------------------------------------------------------------- 389 (796)
T 2c4m_A 378 -DEETINRMAPIQ------------------------------------------------------------------- 389 (796)
T ss_dssp -CHHHHHHHCSEE-------------------------------------------------------------------
T ss_pred -cHhhhhccccee-------------------------------------------------------------------
Confidence 899999999855
Q ss_pred CCCCCCcccchhhhhhhhHHHHHhhhhcCCCCCeeeeeeeecccCCchhHHHHHHHHHHHHhhhhhhhhhcCCCcccccc
Q 001879 567 EEGGPVDEELESEQEDDVLEEEKEAEAVQEPPQLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTN 646 (1001)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~vrMA~Lal~~Sh~VNGVS~lHseI~k~~vf~df~~l~P~kf~n~TN 646 (1001)
+ +.||||+|||++||+|||||++|++++|+.+|++|+++||+||+||||
T Consensus 390 -------------------------~------~~vnMa~lai~~S~~VNgVS~lHae~ik~~~f~~~~~~~p~kf~~iTN 438 (796)
T 2c4m_A 390 -------------------------H------GTVHMAWIACYAAYSINGVAALHTEIIKAETLADWYALWPEKFNNKTN 438 (796)
T ss_dssp -------------------------T------TEEEHHHHHHHHCSEEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCC
T ss_pred -------------------------C------CcccHHHHHHHhcCceeeccHHHHHHhhhhhhhhHHHcCccccccccC
Confidence 2 479999999999999999999999999999999999999999999999
Q ss_pred cccccccccccChhHHHHHHhhcCCCccccCcchHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCCCCcce
Q 001879 647 GVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMF 726 (1001)
Q Consensus 647 GVt~rrWl~~~Np~Ls~Lit~~iG~~~W~~d~~~L~~l~~~~dd~~l~~~w~~~K~~nK~~L~~~Ik~~~G~~vdpdslf 726 (1001)
|||+|||+.+|||+|+++|++.+|+++|.+|+++|++|.++++|++|+++|+++|++||.+|++||++++|..+||++||
T Consensus 439 GI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~ 518 (796)
T 2c4m_A 439 GVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFAEWILERQGIEIDPESIF 518 (796)
T ss_dssp CBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEE
T ss_pred CcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcE
Confidence 99999999999999999999999944899999999999999999999999999999999999999999999999999999
Q ss_pred eccccccchhhhhhhhhhhHHHHHHHHHhcChhhhhccccceEEEEeccCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCc
Q 001879 727 DIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDL 806 (1001)
Q Consensus 727 dvqvKRiheYKRQlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFgGKA~P~y~~AK~IIk~I~~va~~iN~Dp~i~~~ 806 (1001)
|+|||||||||||+||+|++++||.+||+ +|... ++|+||||||||||+|.+||.|||+|+++|++||+||+++++
T Consensus 519 ~~~vkRlheYKRq~Lnil~ii~~~~~i~~-~~~~~---~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~~~ 594 (796)
T 2c4m_A 519 DVQIKRLHEYKRQLMNALYVLDLYFRIKE-DGLTD---IPARTVIFGAKAAPGYVRAKAIIKLINSIADLVNNDPEVSPL 594 (796)
T ss_dssp EEEECCCCGGGTHHHHHHHHHHHHHHHHT-SCCCS---SCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTTTT
T ss_pred EEEeecchhhcccCEeHHHHHHHHHHHhh-CCCCC---CCCeEEEEEecCCHhHHHHHHHHHHHHHHHHHhccccccCCc
Confidence 99999999999999999999999999998 66543 689999999999999999999999999999999999999999
Q ss_pred ceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEecccchhhhh
Q 001879 807 LKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIA 886 (1001)
Q Consensus 807 LKVVFlpnYnVslAe~LipasDls~nistag~EASGTSnMKfamNG~l~igTlDGanvEI~e~vG~eN~flFG~~~~ei~ 886 (1001)
|||||+|||||++|++|+||||||+||||||+||||||||||||||+|+|||||||||||.|++|++|+|+||.+++|+.
T Consensus 595 lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~NgF~FG~~~~ev~ 674 (796)
T 2c4m_A 595 LKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANVEIVDSVGEENAYIFGARVEELP 674 (796)
T ss_dssp EEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHHHHCGGGSEEESCCTTTHH
T ss_pred eEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCCeEeehhhhcCCCcEEEecCchhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccCCCC---CCCChhHHHHHHHHhcCCCCcc---cHHHHHHHhccCCCCCCCcccccccchhHHHHHHHHHHHHh-
Q 001879 887 GLRKERSEGK---FVPDARFEEVKKFVKSGVFGSY---NYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAY- 959 (1001)
Q Consensus 887 ~l~~~~~~~~---~~~~~~l~~v~~~i~~g~f~~~---~~~~L~~~L~~~~~~~~~D~~~v~~Df~sY~~~q~~V~~~Y- 959 (1001)
.++.. +.+ |..+|.++++++.+.+|.|+.. +|.+||++|..+.+++.+|+|||++||+||++||++|+++|
T Consensus 675 ~l~~~--y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~~~y~~Ly~~L~~~~~~~~~D~~~~~~Df~~y~~~q~~v~~~y~ 752 (796)
T 2c4m_A 675 ALRES--YKPYELYETVPGLKRALDALDNGTLNDNNSGLFYDLKHSLIHGYGKDASDTYYVLGDFADYRETRDRMAADYA 752 (796)
T ss_dssp HHHHT--CCHHHHHHHSTTHHHHHHTTTSSSSCCTTCCHHHHHHHHHHSCCGGGCSCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHh--hChHHHhhcCHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhcccCCCCCcchhhhhHHHHHHHHHHHHHHHH
Confidence 99987 443 6677899999999999999754 49999999974111222699999999999999999999988
Q ss_pred cCHhHHHHHHHHhhhcCCCCChHHHHHHHHHHHhcccccCCC
Q 001879 960 CDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP 1001 (1001)
Q Consensus 960 ~d~~~W~~~~i~niA~sg~FSSDRtI~eYa~~IW~i~p~~~p 1001 (1001)
+|+++|++|||+|||+||+|||||||+|||++||+++|+++|
T Consensus 753 ~d~~~W~~~~i~nia~~g~FssdRti~eY~~~iw~~~~~~~~ 794 (796)
T 2c4m_A 753 SDPLGWARMAWINICESGRFSSDRTIRDYATEIWKLEPTPAV 794 (796)
T ss_dssp HCHHHHHHHHHHHHHHGGGGBHHHHHHHHHHHTTCCCCCCC-
T ss_pred HCHHHHHHHHHHHHHhcCccCchHHHHHHHHHHhCCCCCCcC
Confidence 999999999999999999999999999999999999998764
No 5
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=99.31 E-value=9.5e-12 Score=142.57 Aligned_cols=275 Identities=14% Similarity=0.172 Sum_probs=190.1
Q ss_pred CeeeeeeeecccCCchhHHHHHHHHHHHHhhhhhhh----hhcCCCcccccccccccccccccChhHHHHHHhhcCCCcc
Q 001879 599 QLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFY----KLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDW 674 (1001)
Q Consensus 599 ~~vrMA~Lal~~Sh~VNGVS~lHseI~k~~vf~df~----~l~P~kf~n~TNGVt~rrWl~~~Np~Ls~Lit~~iG~~~W 674 (1001)
+.++|-..++..|..|+.||.-+.+=+.+. |..-. ..-+.++.-|.|||....| ||.- +..+..
T Consensus 230 ~~~n~~k~~i~~ad~v~tVS~~~a~ei~~~-~~~g~~l~~~~~~~~i~~I~NGiD~~~~----~p~~----d~~~~~--- 297 (536)
T 3vue_A 230 RKINWMKAGILEADRVLTVSPYYAEELISG-IARGCELDNIMRLTGITGIVNGMDVSEW----DPSK----DKYITA--- 297 (536)
T ss_dssp EEEEHHHHHHHHCSEEEESCHHHHHHHHTT-CCCCSSSCCCSCCCSCEECCCCCCTTTS----CTTT----CSSSSC---
T ss_pred cchhHHHHHHHhccEEEEcCHHHhhhhhcc-cccccccccccccCCeEEEECCcchhhc----CCCC----cccccc---
Confidence 578999999999999999988776532221 11000 0123578899999999999 4642 111110
Q ss_pred ccCcchHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCCCCcceeccccccchhhhhhhhhhhHHHHHHHHH
Q 001879 675 VTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMK 754 (1001)
Q Consensus 675 ~~d~~~L~~l~~~~dd~~l~~~w~~~K~~nK~~L~~~Ik~~~G~~vdpdslfdvqvKRiheYKRQlLNil~ii~ry~~ik 754 (1001)
++.... ..+.|..+|..| +++.|..+||+..+.++|-|+.++|...+ ++..+.+ |+
T Consensus 298 -----------~~~~~~-----~~~~K~~~k~~l----~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~-li~a~~~---l~ 353 (536)
T 3vue_A 298 -----------KYDATT-----AIEAKALNKEAL----QAEAGLPVDRKIPLIAFIGRLEEQKGPDV-MAAAIPE---LM 353 (536)
T ss_dssp -----------CCCTTT-----HHHHHHHHHHHH----HHHTTSCCCTTSCEEEEECCBSGGGCHHH-HHHHHHH---HT
T ss_pred -----------ccchhh-----hhhhhHHHHHHH----HHhcCCCCCCCCcEEEEEeeccccCChHH-HHHHHHH---hH
Confidence 011111 125677777665 56789999999999999999999999998 7766554 33
Q ss_pred hcChhhhhccccceEEEEeccCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccC
Q 001879 755 EMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHIS 834 (1001)
Q Consensus 755 ~~~~~~r~~~~~Pr~~IFgGKA~P~y~~AK~IIk~I~~va~~iN~Dp~i~~~LKVVFlpnYnVslAe~LipasDls~nis 834 (1001)
+ . ..++++.|...+.+.. .++ ..+.. ..+ +|.|+..|+......+..+||+...-|
T Consensus 354 ~----~------~~~l~l~G~G~~~~~~---~~~---~~~~~------~~~--~v~~~~~~~~~~~~~~~~~aD~~v~PS 409 (536)
T 3vue_A 354 Q----E------DVQIVLLGTGKKKFEK---LLK---SMEEK------YPG--KVRAVVKFNAPLAHLIMAGADVLAVPS 409 (536)
T ss_dssp T----S------SCEEEEECCBCHHHHH---HHH---HHHHH------STT--TEEEECSCCHHHHHHHHHHCSEEEECC
T ss_pred h----h------CCeEEEEeccCchHHH---HHH---HHHhh------cCC--ceEEEEeccHHHHHHHHHhhheeeccc
Confidence 2 0 2356666754433322 222 22221 122 799999999999999999999999888
Q ss_pred CCccccCCCccchhhcccceEeeecccccccccccccccceEecccchhhhhhhhhccCCCCCCCChhHHHHHHHHhcCC
Q 001879 835 TAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGV 914 (1001)
Q Consensus 835 tag~EASGTSnMKfamNG~l~igTlDGanvEI~e~vG~eN~flFG~~~~ei~~l~~~~~~~~~~~~~~l~~v~~~i~~g~ 914 (1001)
+ .|.+|.+-|-+|..|++.|+|--|...|+.++. +|+|+|+.... ..+ .
T Consensus 410 ~--~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg--~~G~~~~~~~~-----------~g~----------------l 458 (536)
T 3vue_A 410 R--FEPCGLIQLQGMRYGTPCACASTGGLVDTVIEG--KTGFHMGRLSV-----------DCK----------------V 458 (536)
T ss_dssp S--CCSSCSHHHHHHHTTCCEEECSCTHHHHHCCBT--TTEEECCCCCS-----------CTT----------------C
T ss_pred c--cCCCCHHHHHHHHcCCCEEEcCCCCchheeeCC--CCccccccCCC-----------cee----------------E
Confidence 7 599999999999999999999999999987654 89999986311 011 2
Q ss_pred CCcccHHHHHHHhccCCCCCCCcccccccchhHHHHHHHHHHHHhcCHhHHHHHHHHhhhcCCCCChHHHHHHHHHHHh
Q 001879 915 FGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIW 993 (1001)
Q Consensus 915 f~~~~~~~L~~~L~~~~~~~~~D~~~v~~Df~sY~~~q~~V~~~Y~d~~~W~~~~i~niA~sg~FSSDRtI~eYa~~IW 993 (1001)
|.+.+.+.|...|. ++...|.+ ..|.+|+...++ -.||=+++.++|.+ +|
T Consensus 459 ~~~~d~~~la~ai~-------------------------ral~~~~~-~~~~~~~~~am~--~~fSW~~~A~~y~~-ly 508 (536)
T 3vue_A 459 VEPSDVKKVAATLK-------------------------RAIKVVGT-PAYEEMVRNCMN--QDLSWKGPAKNWEN-VL 508 (536)
T ss_dssp CCHHHHHHHHHHHH-------------------------HHHHHTTS-HHHHHHHHHHHH--SCCSSHHHHHHHHH-HH
T ss_pred ECCCCHHHHHHHHH-------------------------HHHHhcCc-HHHHHHHHHHHH--hcCCHHHHHHHHHH-HH
Confidence 33445666666664 55566754 569888776554 36999999999965 44
No 6
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=97.65 E-value=0.00068 Score=74.29 Aligned_cols=138 Identities=12% Similarity=0.111 Sum_probs=95.8
Q ss_pred HHHHcCCcCCCCcceeccccccchhhhhhhhhhhHHHHHHHHHhcChhhhhccccceEEEEeccCCCCcHHHHHHHHHHH
Q 001879 712 IKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFIT 791 (1001)
Q Consensus 712 Ik~~~G~~vdpdslfdvqvKRiheYKRQlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFgGKA~P~y~~AK~IIk~I~ 791 (1001)
++++.|..-+++....+++-|+..+|...+ ++..+.+ +++ . +.++++.|...+. ....+-+++.
T Consensus 280 ~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~---l~~-~---------~~~l~ivG~g~~~--~~~~l~~~~~ 343 (485)
T 2qzs_A 280 LQIAMGLKVDDKVPLFAVVSRLTSQKGLDL-VLEALPG---LLE-Q---------GGQLALLGAGDPV--LQEGFLAAAA 343 (485)
T ss_dssp HHHHHTCCCCTTSCEEEEEEEESGGGCHHH-HHHHHHH---HHH-T---------TCEEEEEEEECHH--HHHHHHHHHH
T ss_pred HHHHcCCCCCCCCeEEEEeccCccccCHHH-HHHHHHH---Hhh-C---------CcEEEEEeCCchH--HHHHHHHHHH
Confidence 455667655458889999999999999887 6655444 332 1 3467777764221 2233444443
Q ss_pred HHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeeccccccccccccc
Q 001879 792 DVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVG 871 (1001)
Q Consensus 792 ~va~~iN~Dp~i~~~LKVVFlpnYnVslAe~LipasDls~nistag~EASGTSnMKfamNG~l~igTlDGanvEI~e~vG 871 (1001)
+.+ + +|+|+..|.-.....++.+||+...-|. .|..|.+-+-+|.-|++.|+|-.|...|+.++..
T Consensus 344 ~~~----------~--~v~~~~g~~~~~~~~~~~~adv~v~pS~--~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~ 409 (485)
T 2qzs_A 344 EYP----------G--QVGVQIGYHEAFSHRIMGGADVILVPSR--FEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCS 409 (485)
T ss_dssp HST----------T--TEEEEESCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCC
T ss_pred hCC----------C--cEEEeCCCCHHHHHHHHHhCCEEEECCc--cCCCcHHHHHHHHCCCCEEECCCCCccceeccCc
Confidence 321 2 6887777766666788999999998877 6999999999999999999998888877764421
Q ss_pred -------ccceEecc
Q 001879 872 -------EENFFLFG 879 (1001)
Q Consensus 872 -------~eN~flFG 879 (1001)
..|+++|.
T Consensus 410 ~~~~~~~~~~G~l~~ 424 (485)
T 2qzs_A 410 LENLADGVASGFVFE 424 (485)
T ss_dssp HHHHHTTCCCBEEEC
T ss_pred cccccccccceEEEC
Confidence 15666664
No 7
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=97.57 E-value=0.00094 Score=79.91 Aligned_cols=219 Identities=16% Similarity=0.162 Sum_probs=140.6
Q ss_pred eeeeeeeecccCCchhHHHHHHHHHHHHhhhhhhhhhcCCCcccccccccccccccccChhHHHHHHhhcCCCccccCcc
Q 001879 600 LVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTG 679 (1001)
Q Consensus 600 ~vrMA~Lal~~Sh~VNGVS~lHseI~k~~vf~df~~l~P~kf~n~TNGVt~rrWl~~~Np~Ls~Lit~~iG~~~W~~d~~ 679 (1001)
.++|=..+++.++.|+.||....+=++. ++..-|.++ |-|||....| ||.
T Consensus 250 ~~~~EKaga~~AD~ITTVS~~yA~Ei~~-----Ll~r~~d~i--IpNGID~~~f----~p~------------------- 299 (725)
T 3nb0_A 250 RYCIERAAAHSADVFTTVSQITAFEAEH-----LLKRKPDGI--LPNGLNVIKF----QAF------------------- 299 (725)
T ss_dssp HHHHHHHHHHHSSEEEESSHHHHHHHHH-----HTSSCCSEE--CCCCBCCCCC----SST-------------------
T ss_pred HHHHHHHHHHhCCEEEECCHHHHHHHHH-----HhcCCCCEE--EcCCcccccc----Ccc-------------------
Confidence 3555567788999999998776664432 333334545 9999998888 342
Q ss_pred hHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcC--CcCCCCc-ceeccccccc-hhhhhhhhhhhHHHHHHHHHh
Q 001879 680 KLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTG--YSVSPDA-MFDIQVKRIH-EYKRQLMNILGIVYRYKKMKE 755 (1001)
Q Consensus 680 ~L~~l~~~~dd~~l~~~w~~~K~~nK~~L~~~Ik~~~G--~~vdpds-lfdvqvKRih-eYKRQlLNil~ii~ry~~ik~ 755 (1001)
.. +.+.|..+|.+|.++++.+.+ ..++++. +...-+-|+. +-|=-.| ++..+.++.+...
T Consensus 300 -----------~~----~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~liifivgRle~~nKGiDl-~ieAl~~L~~~l~ 363 (725)
T 3nb0_A 300 -----------HE----FQNLHALKKEKINDFVRGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADM-FIEALARLNYRLK 363 (725)
T ss_dssp -----------TH----HHHHHHHHHHHHHHHHHHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHH-HHHHHHHHHHHHH
T ss_pred -----------hh----hHHHHHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEEEeccccCCHHH-HHHHHHHHHHHHh
Confidence 11 446888999999999988764 5787555 4555579998 6688888 8888888876632
Q ss_pred cChhhhhccccceEEEEeccCCCC----------------------cHHHHHHHHHHHH---------------------
Q 001879 756 MSAVERKAKFVPRVCIFGGKAFAT----------------------YVQAKRIVKFITD--------------------- 792 (1001)
Q Consensus 756 ~~~~~r~~~~~Pr~~IFgGKA~P~----------------------y~~AK~IIk~I~~--------------------- 792 (1001)
.+...+ -+=.-+|+.++..-- -..||++......
T Consensus 364 ~~~~~~---~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~ 440 (725)
T 3nb0_A 364 VSGSKK---TVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSS 440 (725)
T ss_dssp HTTCCC---EEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHH
T ss_pred hccCCC---cEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChH
Confidence 122111 111123444432211 0123333322110
Q ss_pred -----------Hh--------------------------hhhcCCcCCCCcceEEEecCCChhh-------hhhhccccc
Q 001879 793 -----------VG--------------------------ATVNHDPEIGDLLKVIFVPDYNVSV-------AELLIPASE 828 (1001)
Q Consensus 793 -----------va--------------------------~~iN~Dp~i~~~LKVVFlpnYnVsl-------Ae~LipasD 828 (1001)
.. +-++-...-.++.||||+|.|-=+. -+.++.+||
T Consensus 441 ~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~ad 520 (725)
T 3nb0_A 441 DKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCH 520 (725)
T ss_dssp HHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCS
T ss_pred HHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhce
Confidence 00 0011111234889999999986553 356789999
Q ss_pred cccccCCCccccCCCccchhhcccceEeeeccccccccccc
Q 001879 829 LSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQE 869 (1001)
Q Consensus 829 ls~nistag~EASGTSnMKfamNG~l~igTlDGanvEI~e~ 869 (1001)
+...-|. .|..|-.-|-+|.-|++.|.|--|--.|+..+
T Consensus 521 vfV~PS~--~EgfGl~~LEAmA~G~PvI~s~~gG~~d~V~d 559 (725)
T 3nb0_A 521 LGVFPSY--YEPWGYTPAECTVMGVPSITTNVSGFGSYMED 559 (725)
T ss_dssp EEECCCS--SBSSCHHHHHHHHTTCCEEEETTBHHHHHHHT
T ss_pred EEEeccc--cCCCCHHHHHHHHcCCCEEEeCCCChhhhhhc
Confidence 9999886 79999999999999999999977765554433
No 8
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=97.57 E-value=0.0013 Score=72.05 Aligned_cols=185 Identities=16% Similarity=0.145 Sum_probs=122.0
Q ss_pred HHHHcCCcCCCCcceeccccccchhhhhhhhhhhHHHHHHHHHhcChhhhhccccceEEEEeccCCCCcHHHHHHHHHHH
Q 001879 712 IKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFIT 791 (1001)
Q Consensus 712 Ik~~~G~~vdpdslfdvqvKRiheYKRQlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFgGKA~P~y~~AK~IIk~I~ 791 (1001)
++++.|..-++ ....+++=|+..+|...+ ++..+.++ ++ . ..++++.|...+. ....+-+++.
T Consensus 280 ~r~~~~~~~~~-~~~i~~vGrl~~~Kg~~~-li~a~~~l---~~-~---------~~~l~ivG~g~~~--~~~~l~~~~~ 342 (485)
T 1rzu_A 280 VAEHFRIDDDG-SPLFCVISRLTWQKGIDL-MAEAVDEI---VS-L---------GGRLVVLGAGDVA--LEGALLAAAS 342 (485)
T ss_dssp HHHHHTCCCSS-SCEEEEESCBSTTTTHHH-HHTTHHHH---HH-T---------TCEEEEEECBCHH--HHHHHHHHHH
T ss_pred HHHhcCCCCCC-CeEEEEEccCccccCHHH-HHHHHHHH---Hh-c---------CceEEEEeCCchH--HHHHHHHHHH
Confidence 34556654332 347889999999999888 77665543 22 0 3467777764221 2233444443
Q ss_pred HHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccc-
Q 001879 792 DVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEV- 870 (1001)
Q Consensus 792 ~va~~iN~Dp~i~~~LKVVFlpnYnVslAe~LipasDls~nistag~EASGTSnMKfamNG~l~igTlDGanvEI~e~v- 870 (1001)
..+ + +|+|+..|.-.....++.+||+....|. .|..|.+-+-+|.-|++.|+|-.|...|+.+..
T Consensus 343 ~~~----------~--~v~~~~g~~~~~~~~~~~~adv~v~pS~--~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~ 408 (485)
T 1rzu_A 343 RHH----------G--RVGVAIGYNEPLSHLMQAGCDAIIIPSR--FEPCGLTQLYALRYGCIPVVARTGGLADTVIDAN 408 (485)
T ss_dssp HTT----------T--TEEEEESCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCC
T ss_pred hCC----------C--cEEEecCCCHHHHHHHHhcCCEEEECcc--cCCCCHHHHHHHHCCCCEEEeCCCChhheecccc
Confidence 321 2 6887777876666788999999998877 699999999999999999999888888766432
Q ss_pred ------cccceEecccchhhhhhhhhccCCCCCCCChhHHHHHHHHhcCCCCcccHHHHHHHhccCCCCCCCcccccccc
Q 001879 871 ------GEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKD 944 (1001)
Q Consensus 871 ------G~eN~flFG~~~~ei~~l~~~~~~~~~~~~~~l~~v~~~i~~g~f~~~~~~~L~~~L~~~~~~~~~D~~~v~~D 944 (1001)
+.+|+++|... +.++|.+.|.
T Consensus 409 ~~~~~~~~~~G~l~~~~-------------------------------------d~~~la~~i~---------------- 435 (485)
T 1rzu_A 409 HAALASKAATGVQFSPV-------------------------------------TLDGLKQAIR---------------- 435 (485)
T ss_dssp HHHHHTTCCCBEEESSC-------------------------------------SHHHHHHHHH----------------
T ss_pred cccccccCCcceEeCCC-------------------------------------CHHHHHHHHH----------------
Confidence 11566666321 1222333332
Q ss_pred hhHHHHHHHHHHHHhcCHhHHHHHHHHhhhcCCCCChHHHHHHHHHH
Q 001879 945 FPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARD 991 (1001)
Q Consensus 945 f~sY~~~q~~V~~~Y~d~~~W~~~~i~niA~sg~FSSDRtI~eYa~~ 991 (1001)
++...|.|+..|.+|.....+ -.||.+++.++|.+-
T Consensus 436 ---------~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~~ 471 (485)
T 1rzu_A 436 ---------RTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYAAL 471 (485)
T ss_dssp ---------HHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHHHH
T ss_pred ---------HHHHHhCCHHHHHHHHHHHHH--HhCChHHHHHHHHHH
Confidence 333345678888877766543 689999999988753
No 9
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=96.81 E-value=0.0096 Score=63.14 Aligned_cols=135 Identities=16% Similarity=0.081 Sum_probs=92.8
Q ss_pred HHHcCCcCCCCcceeccccccc-hhhhhhhhhhhHHHHHHHHHhcChhhhhccccceEEEEeccCCCCcHHHHHHHHHHH
Q 001879 713 KEKTGYSVSPDAMFDIQVKRIH-EYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFIT 791 (1001)
Q Consensus 713 k~~~G~~vdpdslfdvqvKRih-eYKRQlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFgGKA~P~y~~AK~IIk~I~ 791 (1001)
+++.| ++++ ...+++=|+. .+|...+ ++..+.+ +++ ... ..+..+++.|...+.| ...+-+++.
T Consensus 243 ~~~~~--~~~~-~~i~~~G~~~~~~Kg~~~-li~a~~~---l~~-~~~-----~~~~~l~i~G~g~~~~--~~~l~~~~~ 307 (439)
T 3fro_A 243 LSKFG--MDEG-VTFMFIGRFDRGQKGVDV-LLKAIEI---LSS-KKE-----FQEMRFIIIGKGDPEL--EGWARSLEE 307 (439)
T ss_dssp HHHHT--CCSC-EEEEEECCSSCTTBCHHH-HHHHHHH---HHT-SGG-----GGGEEEEEECCCCHHH--HHHHHHHHH
T ss_pred HHHcC--CCCC-cEEEEEcccccccccHHH-HHHHHHH---HHh-ccc-----CCCeEEEEEcCCChhH--HHHHHHHHh
Confidence 34455 4667 8899999999 9999887 6665544 432 110 1256788888654221 233333333
Q ss_pred HHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeeccccccccccccc
Q 001879 792 DVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVG 871 (1001)
Q Consensus 792 ~va~~iN~Dp~i~~~LKVVFlpnYnVslAe~LipasDls~nistag~EASGTSnMKfamNG~l~igTlDGanvEI~e~vG 871 (1001)
+.+ + .|+|..-+.-+-...++.+||+....|.. |..|.+-+-+|.-|++.|+|-.|..-|+.+
T Consensus 308 ~~~----------~--~~~~~g~~~~~~~~~~~~~adv~v~ps~~--e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~--- 370 (439)
T 3fro_A 308 KHG----------N--VKVITEMLSREFVRELYGSVDFVIIPSYF--EPFGLVALEAMCLGAIPIASAVGGLRDIIT--- 370 (439)
T ss_dssp HCT----------T--EEEECSCCCHHHHHHHHTTCSEEEECBSC--CSSCHHHHHHHHTTCEEEEESSTHHHHHCC---
T ss_pred hcC----------C--EEEEcCCCCHHHHHHHHHHCCEEEeCCCC--CCccHHHHHHHHCCCCeEEcCCCCcceeEE---
Confidence 222 1 35555546777777888999999988874 999999999999999999998888777664
Q ss_pred ccceEecc
Q 001879 872 EENFFLFG 879 (1001)
Q Consensus 872 ~eN~flFG 879 (1001)
+.+++++.
T Consensus 371 ~~~g~~~~ 378 (439)
T 3fro_A 371 NETGILVK 378 (439)
T ss_dssp TTTCEEEC
T ss_pred cCceEEeC
Confidence 23777775
No 10
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=96.64 E-value=0.013 Score=62.86 Aligned_cols=134 Identities=19% Similarity=0.133 Sum_probs=91.9
Q ss_pred CCCCcceeccccccchhhhhhhhhhhHHHHHHHHHhcChhhhhccccceEEEEeccCCCCcHH-HHHHHHHHHHHhhhhc
Q 001879 720 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQ-AKRIVKFITDVGATVN 798 (1001)
Q Consensus 720 vdpdslfdvqvKRiheYKRQlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFgGKA~P~y~~-AK~IIk~I~~va~~iN 798 (1001)
++++....+++=|++.+|...+ ++..+.+ +++.. ....+++.|.....+.. ...+-+++...+
T Consensus 227 ~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~---l~~~~--------~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~---- 290 (416)
T 2x6q_A 227 VDPEKPIITQVSRFDPWKGIFD-VIEIYRK---VKEKI--------PGVQLLLVGVMAHDDPEGWIYFEKTLRKIG---- 290 (416)
T ss_dssp CCTTSCEEEEECCCCTTSCHHH-HHHHHHH---HHHHC--------TTCEEEEEECCCTTCHHHHHHHHHHHHHHT----
T ss_pred CCCCCcEEEEEeccccccCHHH-HHHHHHH---HHHhC--------CCeEEEEEecCcccchhHHHHHHHHHHHhC----
Confidence 5677888999999999999887 6665544 33211 13567777765543222 223333333332
Q ss_pred CCcCCCCcceEEEec---CCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccce
Q 001879 799 HDPEIGDLLKVIFVP---DYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENF 875 (1001)
Q Consensus 799 ~Dp~i~~~LKVVFlp---nYnVslAe~LipasDls~nistag~EASGTSnMKfamNG~l~igTlDGanvEI~e~vG~eN~ 875 (1001)
+.+ +|.|+. +++-.-...++.+||+....|. .|..|+.-+-+|.-|++.|+|--|...|+.+.. +++
T Consensus 291 ----~~~--~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~--~E~~~~~~lEAma~G~PvI~~~~~g~~e~i~~~--~~g 360 (416)
T 2x6q_A 291 ----EDY--DVKVLTNLIGVHAREVNAFQRASDVILQMSI--REGFGLTVTEAMWKGKPVIGRAVGGIKFQIVDG--ETG 360 (416)
T ss_dssp ----TCT--TEEEEEGGGTCCHHHHHHHHHHCSEEEECCS--SCSSCHHHHHHHHTTCCEEEESCHHHHHHCCBT--TTE
T ss_pred ----CCC--cEEEecccCCCCHHHHHHHHHhCCEEEECCC--cCCCccHHHHHHHcCCCEEEccCCCChhheecC--CCe
Confidence 123 588865 4444455678899999988777 599999999999999999999878877766543 578
Q ss_pred Eecc
Q 001879 876 FLFG 879 (1001)
Q Consensus 876 flFG 879 (1001)
+++.
T Consensus 361 ~l~~ 364 (416)
T 2x6q_A 361 FLVR 364 (416)
T ss_dssp EEES
T ss_pred EEEC
Confidence 8875
No 11
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=96.56 E-value=0.018 Score=60.28 Aligned_cols=130 Identities=12% Similarity=0.081 Sum_probs=91.8
Q ss_pred CCCCcceeccccccchhhhhhhhhhhHHHHHHHHHhcChhhhhccccceEEEEeccCCCCcHHHHHHHHHHHHHhhhhcC
Q 001879 720 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 799 (1001)
Q Consensus 720 vdpdslfdvqvKRiheYKRQlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFgGKA~P~y~~AK~IIk~I~~va~~iN~ 799 (1001)
++++....+++-|+..+|+..+ ++..+.++.+- . ....+++.|.. |. ...+-+++..+
T Consensus 194 ~~~~~~~i~~~G~~~~~Kg~~~-li~a~~~l~~~---~--------~~~~l~i~G~g-~~---~~~l~~~~~~~------ 251 (394)
T 3okp_A 194 FTDTTPVIACNSRLVPRKGQDS-LIKAMPQVIAA---R--------PDAQLLIVGSG-RY---ESTLRRLATDV------ 251 (394)
T ss_dssp CCTTCCEEEEESCSCGGGCHHH-HHHHHHHHHHH---S--------TTCEEEEECCC-TT---HHHHHHHTGGG------
T ss_pred CCcCceEEEEEeccccccCHHH-HHHHHHHHHhh---C--------CCeEEEEEcCc-hH---HHHHHHHHhcc------
Confidence 5677788999999999999887 76655443221 1 13467777753 21 12333333111
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCc-----cccCCCccchhhcccceEeeecccccccccccccccc
Q 001879 800 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAG-----MEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEEN 874 (1001)
Q Consensus 800 Dp~i~~~LKVVFlpnYnVslAe~LipasDls~nistag-----~EASGTSnMKfamNG~l~igTlDGanvEI~e~vG~eN 874 (1001)
.+ +|.|+....-+-...++..||+....|+.+ .|..|++-+-+|.-|++.|+|--|..-|+.+. .+
T Consensus 252 ----~~--~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~---~~ 322 (394)
T 3okp_A 252 ----SQ--NVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTP---AT 322 (394)
T ss_dssp ----GG--GEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCCT---TT
T ss_pred ----cC--eEEEcCCCCHHHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHcCCCEEEeCCCChHHHHhc---CC
Confidence 12 699998865566667889999999988873 49999999999999999999988888877643 27
Q ss_pred eEeccc
Q 001879 875 FFLFGA 880 (1001)
Q Consensus 875 ~flFG~ 880 (1001)
++++..
T Consensus 323 g~~~~~ 328 (394)
T 3okp_A 323 GLVVEG 328 (394)
T ss_dssp EEECCT
T ss_pred ceEeCC
Confidence 777753
No 12
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=96.50 E-value=0.011 Score=71.88 Aligned_cols=145 Identities=12% Similarity=0.059 Sum_probs=98.9
Q ss_pred HHcCCcCCCCcceeccccccchhhhhhhhhhhHHHHHHHHHhcChhhhhccccceEEEEeccCCC---CcHHHHHHHHHH
Q 001879 714 EKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFA---TYVQAKRIVKFI 790 (1001)
Q Consensus 714 ~~~G~~vdpdslfdvqvKRiheYKRQlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFgGKA~P---~y~~AK~IIk~I 790 (1001)
+..|...+++....+++=|+..+|...+ ++..+.+..+.. + ...+++.|...+ .+...+...+.+
T Consensus 562 ~~lg~l~~~~~~vIl~vGRl~~~KGid~-LIeA~~~L~~~~---~--------~v~LvIvG~g~~~~~~~~e~~~~~~~L 629 (816)
T 3s28_A 562 EHLCVLKDKKKPILFTMARLDRVKNLSG-LVEWYGKNTRLR---E--------LANLVVVGGDRRKESKDNEEKAEMKKM 629 (816)
T ss_dssp TEESCBSCTTSCEEEEECCCCTTTTHHH-HHHHHHHCHHHH---H--------HCEEEEECCCTTSCCCCHHHHHHHHHH
T ss_pred HHhcccCCCCCeEEEEEccCcccCCHHH-HHHHHHHHHhhC---C--------CeEEEEEeCCCcccccchhhHHHHHHH
Confidence 3456666889999999999999999887 766655543321 1 245666666542 233333333334
Q ss_pred HHHhhhhcCCcCCCCcceEEEec---CC--ChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeeccccccc
Q 001879 791 TDVGATVNHDPEIGDLLKVIFVP---DY--NVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVE 865 (1001)
Q Consensus 791 ~~va~~iN~Dp~i~~~LKVVFlp---nY--nVslAe~LipasDls~nistag~EASGTSnMKfamNG~l~igTlDGanvE 865 (1001)
...++..+ +.+ +|.|+. |+ .-.+.+.+-.++|+..+.|. .|+.|.+-+-+|.-|++.|+|-.|...|
T Consensus 630 ~~li~~lg----L~~--~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~--~EgfglvllEAMA~G~PVIasd~GG~~E 701 (816)
T 3s28_A 630 YDLIEEYK----LNG--QFRWISSQMDRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAE 701 (816)
T ss_dssp HHHHHHTT----CBB--BEEEECCCCCHHHHHHHHHHHHHTTCEEEECCS--CBSSCHHHHHHHHTTCCEEEESSBTHHH
T ss_pred HHHHHHcC----CCC--cEEEccCccccCCHHHHHHHHHhcCeEEEECCC--ccCccHHHHHHHHcCCCEEEeCCCChHH
Confidence 33333222 334 788886 22 12355555568999998876 5999999999999999999999999988
Q ss_pred ccccccccceEeccc
Q 001879 866 IRQEVGEENFFLFGA 880 (1001)
Q Consensus 866 I~e~vG~eN~flFG~ 880 (1001)
+.+.. +|+++|..
T Consensus 702 iV~dg--~~Gllv~p 714 (816)
T 3s28_A 702 IIVHG--KSGFHIDP 714 (816)
T ss_dssp HCCBT--TTBEEECT
T ss_pred HHccC--CcEEEeCC
Confidence 77543 78888865
No 13
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=96.30 E-value=0.022 Score=60.83 Aligned_cols=125 Identities=14% Similarity=0.106 Sum_probs=85.5
Q ss_pred CcceeccccccchhhhhhhhhhhHHHHHHHHHhcChhhhhccccceEEEEeccCCC--CcHHHHHHHHHHHHHhhhhcCC
Q 001879 723 DAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFA--TYVQAKRIVKFITDVGATVNHD 800 (1001)
Q Consensus 723 dslfdvqvKRiheYKRQlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFgGKA~P--~y~~AK~IIk~I~~va~~iN~D 800 (1001)
+....+++=|+..+|...+ ++..+.++.+- .| ...+++.|...+ .|..-+.+-+++.+.+
T Consensus 183 ~~~~il~vGr~~~~Kg~~~-li~a~~~l~~~---~~--------~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~------ 244 (413)
T 3oy2_A 183 DDVLFLNMNRNTARKRLDI-YVLAAARFISK---YP--------DAKVRFLCNSHHESKFDLHSIALRELVASG------ 244 (413)
T ss_dssp TSEEEECCSCSSGGGTHHH-HHHHHHHHHHH---CT--------TCCEEEEEECCTTCSCCHHHHHHHHHHHHT------
T ss_pred CceEEEEcCCCchhcCcHH-HHHHHHHHHHh---CC--------CcEEEEEeCCcccchhhHHHHHHHHHHHcC------
Confidence 7889999999999999988 77666554221 22 235666665543 3333355555555443
Q ss_pred cCCCCc----ceEEEecCC-ChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeeccccccccccc
Q 001879 801 PEIGDL----LKVIFVPDY-NVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQE 869 (1001)
Q Consensus 801 p~i~~~----LKVVFlpnY-nVslAe~LipasDls~nistag~EASGTSnMKfamNG~l~igTlDGanvEI~e~ 869 (1001)
+.+. -+||++..| +-.-...++.+||+....|. .|..|.+-+-+|.-|++.|+|--|..-|+.++
T Consensus 245 --l~~~v~~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~--~E~~~~~~lEAma~G~PvI~s~~~g~~e~v~~ 314 (413)
T 3oy2_A 245 --VDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSS--GEGFGLCSAEGAVLGKPLIISAVGGADDYFSG 314 (413)
T ss_dssp --CSCHHHHHTTEEEECSCCCHHHHHHHHHHCSEEEECCS--CCSSCHHHHHHHTTTCCEEEECCHHHHHHSCT
T ss_pred --cccccccccceeeccCcCCHHHHHHHHHhCCEEEeCCC--cCCCCcHHHHHHHcCCCEEEcCCCChHHHHcc
Confidence 2221 025555554 43445557899999999776 69999999999999999999988887776643
No 14
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=96.28 E-value=0.026 Score=60.57 Aligned_cols=137 Identities=15% Similarity=0.116 Sum_probs=92.8
Q ss_pred CCCCcceeccccccchhhhhhhhhhhHHHHHHHHHhcChhhhhccccceEEEEeccCCCCcHHHHHHHHHHHHHhhhhcC
Q 001879 720 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 799 (1001)
Q Consensus 720 vdpdslfdvqvKRiheYKRQlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFgGKA~P~y~~AK~IIk~I~~va~~iN~ 799 (1001)
++++....+++-|+..+|...+ ++..+.+ +++..|. ....+++.|...+.-...+.+.+++.+.+
T Consensus 239 ~~~~~~~i~~~G~~~~~Kg~~~-li~a~~~---l~~~~p~------~~~~l~i~G~~~~~g~~~~~l~~~~~~~~----- 303 (438)
T 3c48_A 239 IPLHTKVVAFVGRLQPFKGPQV-LIKAVAA---LFDRDPD------RNLRVIICGGPSGPNATPDTYRHMAEELG----- 303 (438)
T ss_dssp CCSSSEEEEEESCBSGGGCHHH-HHHHHHH---HHHHCTT------CSEEEEEECCBC------CHHHHHHHHTT-----
T ss_pred CCCCCcEEEEEeeecccCCHHH-HHHHHHH---HHhhCCC------cceEEEEEeCCCCCCcHHHHHHHHHHHcC-----
Confidence 5677788999999999998887 6655444 3321111 13577777764321123344555554433
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEecc
Q 001879 800 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 879 (1001)
Q Consensus 800 Dp~i~~~LKVVFlpnYnVslAe~LipasDls~nistag~EASGTSnMKfamNG~l~igTlDGanvEI~e~vG~eN~flFG 879 (1001)
+.+ +|.|+....-+-...++.+||+....|. .|..|++-+-+|.-|++.|+|--|...|+.++. .+++++.
T Consensus 304 ---l~~--~v~~~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~--~~g~~~~ 374 (438)
T 3c48_A 304 ---VEK--RIRFLDPRPPSELVAVYRAADIVAVPSF--NESFGLVAMEAQASGTPVIAARVGGLPIAVAEG--ETGLLVD 374 (438)
T ss_dssp ---CTT--TEEEECCCCHHHHHHHHHHCSEEEECCS--CCSSCHHHHHHHHTTCCEEEESCTTHHHHSCBT--TTEEEES
T ss_pred ---CCC--cEEEcCCCChHHHHHHHHhCCEEEECcc--ccCCchHHHHHHHcCCCEEecCCCChhHHhhCC--CcEEECC
Confidence 223 6889887654556678899999888775 589999999999999999999888888776542 5778875
Q ss_pred c
Q 001879 880 A 880 (1001)
Q Consensus 880 ~ 880 (1001)
.
T Consensus 375 ~ 375 (438)
T 3c48_A 375 G 375 (438)
T ss_dssp S
T ss_pred C
Confidence 3
No 15
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=96.11 E-value=0.013 Score=56.39 Aligned_cols=135 Identities=16% Similarity=0.098 Sum_probs=94.6
Q ss_pred CCcCCCCcceeccccccchhhhhhhhhhhHHHHHHHHHhcChhhhhccccceEEEEeccCCCCcHHHHHHHHHHHHHhhh
Q 001879 717 GYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGAT 796 (1001)
Q Consensus 717 G~~vdpdslfdvqvKRiheYKRQlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFgGKA~P~y~~AK~IIk~I~~va~~ 796 (1001)
+..++++..+.+++-|+..+|+..+ ++..+.+ +. ...+++.|..... ..+.+++.+...
T Consensus 16 ~~~~~~~~~~i~~~G~~~~~Kg~~~-li~a~~~---l~------------~~~l~i~G~~~~~----~~l~~~~~~~~~- 74 (177)
T 2f9f_A 16 KFKFKCYGDFWLSVNRIYPEKRIEL-QLEVFKK---LQ------------DEKLYIVGWFSKG----DHAERYARKIMK- 74 (177)
T ss_dssp TCCCCCCCSCEEEECCSSGGGTHHH-HHHHHHH---CT------------TSCEEEEBCCCTT----STHHHHHHHHHH-
T ss_pred ccccCCCCCEEEEEeccccccCHHH-HHHHHHh---CC------------CcEEEEEecCccH----HHHHHHHHhhhc-
Confidence 5678888899999999999999877 5544332 21 2356666653322 234444442111
Q ss_pred hcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceE
Q 001879 797 VNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFF 876 (1001)
Q Consensus 797 iN~Dp~i~~~LKVVFlpnYnVslAe~LipasDls~nistag~EASGTSnMKfamNG~l~igTlDGanvEI~e~vG~eN~f 876 (1001)
.+.+ +|.|+....-.-...++.+||+....|+ .|..|++-+-+|.-|++.|+|-.|...|+.+. ..+++
T Consensus 75 -----~l~~--~v~~~g~~~~~e~~~~~~~adi~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~--~~~g~ 143 (177)
T 2f9f_A 75 -----IAPD--NVKFLGSVSEEELIDLYSRCKGLLCTAK--DEDFGLTPIEAMASGKPVIAVNEGGFKETVIN--EKTGY 143 (177)
T ss_dssp -----HSCT--TEEEEESCCHHHHHHHHHHCSEEEECCS--SCCSCHHHHHHHHTTCCEEEESSHHHHHHCCB--TTTEE
T ss_pred -----ccCC--cEEEeCCCCHHHHHHHHHhCCEEEeCCC--cCCCChHHHHHHHcCCcEEEeCCCCHHHHhcC--CCccE
Confidence 1223 5888887766667788999999998776 78899999999999999999988888887654 36788
Q ss_pred ecccchh
Q 001879 877 LFGARAH 883 (1001)
Q Consensus 877 lFG~~~~ 883 (1001)
+|..+.+
T Consensus 144 ~~~~d~~ 150 (177)
T 2f9f_A 144 LVNADVN 150 (177)
T ss_dssp EECSCHH
T ss_pred EeCCCHH
Confidence 8833333
No 16
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=96.04 E-value=0.027 Score=62.20 Aligned_cols=136 Identities=14% Similarity=0.074 Sum_probs=94.2
Q ss_pred CCCCcceeccccccchhhhhhhhhhhHHHHHHHHHhcChhhhhccccceEEEEeccC-CC--CcH-----H---HHHHHH
Q 001879 720 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKA-FA--TYV-----Q---AKRIVK 788 (1001)
Q Consensus 720 vdpdslfdvqvKRiheYKRQlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFgGKA-~P--~y~-----~---AK~IIk 788 (1001)
++++....+++=|+...|...+ ++..+.++.+- .+. ...++++|.. .| .|. . -..+.+
T Consensus 258 ~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~~---~~~-------~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~ 326 (499)
T 2r60_A 258 ERMELPAIIASSRLDQKKNHYG-LVEAYVQNKEL---QDK-------ANLVLTLRGIENPFEDYSRAGQEEKEILGKIIE 326 (499)
T ss_dssp GGTTSCEEEECSCCCGGGCHHH-HHHHHHTCHHH---HHH-------CEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHH
T ss_pred cCCCCcEEEEeecCccccCHHH-HHHHHHHHHHh---CCC-------ceEEEEECCCCCcccccccccccchHHHHHHHH
Confidence 4567778999999999999887 66555443221 011 3356666652 22 221 1 455555
Q ss_pred HHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhcccc----ccccccCCCccccCCCccchhhcccceEeeecccccc
Q 001879 789 FITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPAS----ELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANV 864 (1001)
Q Consensus 789 ~I~~va~~iN~Dp~i~~~LKVVFlpnYnVslAe~Lipas----Dls~nistag~EASGTSnMKfamNG~l~igTlDGanv 864 (1001)
++.+.+ +.+ +|.|+....-+-...++.+| |+-...|. .|..|.+-+=+|.-|++.|+|--|...
T Consensus 327 ~~~~~~--------l~~--~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~--~Eg~~~~~lEAma~G~PvI~s~~~g~~ 394 (499)
T 2r60_A 327 LIDNND--------CRG--KVSMFPLNSQQELAGCYAYLASKGSVFALTSF--YEPFGLAPVEAMASGLPAVVTRNGGPA 394 (499)
T ss_dssp HHHHTT--------CBT--TEEEEECCSHHHHHHHHHHHHHTTCEEEECCS--CBCCCSHHHHHHHTTCCEEEESSBHHH
T ss_pred HHHhcC--------CCc--eEEECCCCCHHHHHHHHHhcCcCCCEEEECcc--cCCCCcHHHHHHHcCCCEEEecCCCHH
Confidence 555443 223 69998876556666788999 99998776 499999999999999999999888888
Q ss_pred cccccccccceEeccc
Q 001879 865 EIRQEVGEENFFLFGA 880 (1001)
Q Consensus 865 EI~e~vG~eN~flFG~ 880 (1001)
|+.+.. +|+++|..
T Consensus 395 e~v~~~--~~g~l~~~ 408 (499)
T 2r60_A 395 EILDGG--KYGVLVDP 408 (499)
T ss_dssp HHTGGG--TSSEEECT
T ss_pred HHhcCC--ceEEEeCC
Confidence 876542 57888853
No 17
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=96.00 E-value=0.018 Score=55.32 Aligned_cols=135 Identities=17% Similarity=0.075 Sum_probs=91.0
Q ss_pred HHHcCCcCCCCcceeccccccc-hhhhhhhhhhhHHHHHHHHHhcChhhhhccccceEEEEeccCCCCcHHHHHHHHHHH
Q 001879 713 KEKTGYSVSPDAMFDIQVKRIH-EYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFIT 791 (1001)
Q Consensus 713 k~~~G~~vdpdslfdvqvKRih-eYKRQlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFgGKA~P~y~~AK~IIk~I~ 791 (1001)
+++.|. +++. +.+++-|++ .+|...+ ++..+.+ ++. +.. ..+..+++.|...|.+ .+.+.+++.
T Consensus 28 r~~~~~--~~~~-~i~~~G~~~~~~K~~~~-li~a~~~---l~~-~~~-----~~~~~l~i~G~~~~~~--~~~l~~~~~ 92 (200)
T 2bfw_A 28 LSKFGM--DEGV-TFMFIGRFDRGQKGVDV-LLKAIEI---LSS-KKE-----FQEMRFIIIGKGDPEL--EGWARSLEE 92 (200)
T ss_dssp HHHTTC--CSCE-EEEEESCBCSSSSCHHH-HHHHHHH---HTT-SGG-----GGGEEEEEECCBCHHH--HHHHHHHHH
T ss_pred HHHcCC--CCCC-EEEEeeccccccCCHHH-HHHHHHH---HHh-hcc-----CCCeEEEEECCCChHH--HHHHHHHHH
Confidence 445564 3333 777889999 9998877 6655433 420 000 1246788888754422 233444443
Q ss_pred HHhhhhcCCcCCCCcceEEE-ecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccc
Q 001879 792 DVGATVNHDPEIGDLLKVIF-VPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEV 870 (1001)
Q Consensus 792 ~va~~iN~Dp~i~~~LKVVF-lpnYnVslAe~LipasDls~nistag~EASGTSnMKfamNG~l~igTlDGanvEI~e~v 870 (1001)
... +|.| +...+-.-...++..||+....|.. |..|++-+-+|..|++.|+|--|..-|+.
T Consensus 93 ~~~-------------~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~--e~~~~~~~Ea~a~G~PvI~~~~~~~~e~~--- 154 (200)
T 2bfw_A 93 KHG-------------NVKVITEMLSREFVRELYGSVDFVIIPSYF--EPFGLVALEAMCLGAIPIASAVGGLRDII--- 154 (200)
T ss_dssp HCT-------------TEEEECSCCCHHHHHHHHTTCSEEEECCSC--CSSCHHHHHHHHTTCEEEEESCHHHHHHC---
T ss_pred hcC-------------CEEEEeccCCHHHHHHHHHHCCEEEECCCC--CCccHHHHHHHHCCCCEEEeCCCChHHHc---
Confidence 221 5888 7766555667888999999997764 89999999999999999999888777766
Q ss_pred cccceEeccc
Q 001879 871 GEENFFLFGA 880 (1001)
Q Consensus 871 G~eN~flFG~ 880 (1001)
..++++++..
T Consensus 155 ~~~~g~~~~~ 164 (200)
T 2bfw_A 155 TNETGILVKA 164 (200)
T ss_dssp CTTTCEEECT
T ss_pred CCCceEEecC
Confidence 3467887753
No 18
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=95.93 E-value=0.019 Score=61.04 Aligned_cols=128 Identities=20% Similarity=0.242 Sum_probs=86.1
Q ss_pred CCCCcceeccccccchhhhhhhhhhhHHHHHHHHHhcChhhhhccccceEEEEeccCCCCcHHHHHHHHHHHHHhhhhcC
Q 001879 720 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 799 (1001)
Q Consensus 720 vdpdslfdvqvKRiheYKRQlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFgGKA~P~y~~AK~IIk~I~~va~~iN~ 799 (1001)
++++....+++-|+..+|...+ ++..+ .++++ . .|..+++.|.. |. ...+.+++.+.+
T Consensus 207 ~~~~~~~i~~~G~~~~~Kg~~~-li~a~---~~l~~-~--------~~~~l~i~G~g-~~---~~~l~~~~~~~~----- 264 (394)
T 2jjm_A 207 ISESEKILIHISNFRKVKRVQD-VVQAF---AKIVT-E--------VDAKLLLVGDG-PE---FCTILQLVKNLH----- 264 (394)
T ss_dssp CC---CEEEEECCCCGGGTHHH-HHHHH---HHHHH-S--------SCCEEEEECCC-TT---HHHHHHHHHTTT-----
T ss_pred CCCCCeEEEEeeccccccCHHH-HHHHH---HHHHh-h--------CCCEEEEECCc-hH---HHHHHHHHHHcC-----
Confidence 4466678889999999998877 55443 33443 1 25577777753 22 234444443332
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEecc
Q 001879 800 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 879 (1001)
Q Consensus 800 Dp~i~~~LKVVFlpnYnVslAe~LipasDls~nistag~EASGTSnMKfamNG~l~igTlDGanvEI~e~vG~eN~flFG 879 (1001)
+.+ +|.|+. + ..-...++.+||+....|. .|+.|++-+-+|..|++.|+|--|...|+.++. +++++|.
T Consensus 265 ---l~~--~v~~~g-~-~~~~~~~~~~adv~v~ps~--~e~~~~~~~EAma~G~PvI~~~~~~~~e~v~~~--~~g~~~~ 333 (394)
T 2jjm_A 265 ---IED--RVLFLG-K-QDNVAELLAMSDLMLLLSE--KESFGLVLLEAMACGVPCIGTRVGGIPEVIQHG--DTGYLCE 333 (394)
T ss_dssp ---CGG--GBCCCB-S-CSCTHHHHHTCSEEEECCS--CCSCCHHHHHHHHTTCCEEEECCTTSTTTCCBT--TTEEEEC
T ss_pred ---CCC--eEEEeC-c-hhhHHHHHHhCCEEEeccc--cCCCchHHHHHHhcCCCEEEecCCChHHHhhcC--CceEEeC
Confidence 222 577777 3 3444567789999998776 699999999999999999999888888876542 6788875
Q ss_pred c
Q 001879 880 A 880 (1001)
Q Consensus 880 ~ 880 (1001)
.
T Consensus 334 ~ 334 (394)
T 2jjm_A 334 V 334 (394)
T ss_dssp T
T ss_pred C
Confidence 3
No 19
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=95.61 E-value=0.045 Score=57.02 Aligned_cols=128 Identities=14% Similarity=0.109 Sum_probs=90.3
Q ss_pred CCCCcceeccccccchhhhhhhhhhhHHHHHHHHHhcChhhhhccccceEEEEeccCCCCcHHHHHHHHHHHHHhhhhcC
Q 001879 720 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 799 (1001)
Q Consensus 720 vdpdslfdvqvKRiheYKRQlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFgGKA~P~y~~AK~IIk~I~~va~~iN~ 799 (1001)
++++....+++-|++.+|...+ ++..+.+ +.+ ... .+..+++.|.... +.+.+++.+.+
T Consensus 192 ~~~~~~~i~~~G~~~~~K~~~~-li~a~~~---l~~---~~~----~~~~l~i~G~g~~-----~~~~~~~~~~~----- 250 (374)
T 2iw1_A 192 IKEQQNLLLQVGSDFGRKGVDR-SIEALAS---LPE---SLR----HNTLLFVVGQDKP-----RKFEALAEKLG----- 250 (374)
T ss_dssp CCTTCEEEEEECSCTTTTTHHH-HHHHHHT---SCH---HHH----HTEEEEEESSSCC-----HHHHHHHHHHT-----
T ss_pred CCCCCeEEEEeccchhhcCHHH-HHHHHHH---hHh---ccC----CceEEEEEcCCCH-----HHHHHHHHHcC-----
Confidence 5667778889999999999887 5544333 211 100 1457888887421 45555555543
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEecc
Q 001879 800 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 879 (1001)
Q Consensus 800 Dp~i~~~LKVVFlpnYnVslAe~LipasDls~nistag~EASGTSnMKfamNG~l~igTlDGanvEI~e~vG~eN~flFG 879 (1001)
+.+ +|.|+.. .+-...++.+||+-...|. .|+.|++-+-+|.-|++.|+|--|...|+.++. ++++++.
T Consensus 251 ---~~~--~v~~~g~--~~~~~~~~~~ad~~v~ps~--~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~--~~g~~~~ 319 (374)
T 2iw1_A 251 ---VRS--NVHFFSG--RNDVSELMAAADLLLHPAY--QEAAGIVLLEAITAGLPVLTTAVCGYAHYIADA--NCGTVIA 319 (374)
T ss_dssp ---CGG--GEEEESC--CSCHHHHHHHCSEEEECCS--CCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHH--TCEEEEC
T ss_pred ---CCC--cEEECCC--cccHHHHHHhcCEEEeccc--cCCcccHHHHHHHCCCCEEEecCCCchhhhccC--CceEEeC
Confidence 112 6888874 3445667899999998776 599999999999999999999878888866543 6788886
No 20
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=94.28 E-value=0.13 Score=54.05 Aligned_cols=125 Identities=10% Similarity=0.056 Sum_probs=84.4
Q ss_pred Ccceecccccc-chhhhhhhhhhhHHHHHHHHHhcChhhhhccccceEEEEeccCCCCcHHHHHHHHHHHHHhhhhcCCc
Q 001879 723 DAMFDIQVKRI-HEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 801 (1001)
Q Consensus 723 dslfdvqvKRi-heYKRQlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFgGKA~P~y~~AK~IIk~I~~va~~iN~Dp 801 (1001)
+....+++-|+ ..+|...+ ++..+ .++++.. ....+++.|... . ..+.+++.+.
T Consensus 207 ~~~~i~~~G~~~~~~Kg~~~-li~a~---~~l~~~~--------~~~~l~i~G~~~---~--~~l~~~~~~~-------- 261 (406)
T 2gek_A 207 EGRTVLFLGRYDEPRKGMAV-LLAAL---PKLVARF--------PDVEILIVGRGD---E--DELREQAGDL-------- 261 (406)
T ss_dssp SSCEEEEESCTTSGGGCHHH-HHHHH---HHHHTTS--------TTCEEEEESCSC---H--HHHHHHTGGG--------
T ss_pred CCeEEEEEeeeCccccCHHH-HHHHH---HHHHHHC--------CCeEEEEEcCCc---H--HHHHHHHHhc--------
Confidence 45678888999 99998877 65544 3344311 235677777642 2 4454544332
Q ss_pred CCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEecc
Q 001879 802 EIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 879 (1001)
Q Consensus 802 ~i~~~LKVVFlpnYnVslAe~LipasDls~nistag~EASGTSnMKfamNG~l~igTlDGanvEI~e~vG~eN~flFG 879 (1001)
.+ +|.|+....=.-...++.+||+-...|. ..|..|++-+-+|..|++.|+|--|..-|+.++ .+++++|.
T Consensus 262 --~~--~v~~~g~~~~~~~~~~~~~adv~v~ps~-~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~~~g~~~~ 332 (406)
T 2gek_A 262 --AG--HLRFLGQVDDATKASAMRSADVYCAPHL-GGESFGIVLVEAMAAGTAVVASDLDAFRRVLAD--GDAGRLVP 332 (406)
T ss_dssp --GG--GEEECCSCCHHHHHHHHHHSSEEEECCC-SCCSSCHHHHHHHHHTCEEEECCCHHHHHHHTT--TTSSEECC
T ss_pred --cC--cEEEEecCCHHHHHHHHHHCCEEEecCC-CCCCCchHHHHHHHcCCCEEEecCCcHHHHhcC--CCceEEeC
Confidence 11 5888876543434677889999988653 368899999999999999999977777776543 25667663
No 21
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=92.90 E-value=0.18 Score=52.49 Aligned_cols=129 Identities=19% Similarity=0.128 Sum_probs=87.2
Q ss_pred CcceeccccccchhhhhhhhhhhHHHHHHHHHhcChhhhhccccceEEEEeccCCCCcHHHHHHHHHHHHHhhhhcCCcC
Q 001879 723 DAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPE 802 (1001)
Q Consensus 723 dslfdvqvKRiheYKRQlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFgGKA~P~y~~AK~IIk~I~~va~~iN~Dp~ 802 (1001)
+..+.+++-|+..+|...+ ++..+.+ + +..+++.|.. |.. ..+-+++..++
T Consensus 161 ~~~~i~~vG~~~~~Kg~~~-li~a~~~---~-------------~~~l~i~G~g-~~~---~~l~~~~~~~~-------- 211 (342)
T 2iuy_A 161 KEDFLLFMGRVSPHKGALE-AAAFAHA---C-------------GRRLVLAGPA-WEP---EYFDEITRRYG-------- 211 (342)
T ss_dssp CCSCEEEESCCCGGGTHHH-HHHHHHH---H-------------TCCEEEESCC-CCH---HHHHHHHHHHT--------
T ss_pred CCCEEEEEeccccccCHHH-HHHHHHh---c-------------CcEEEEEeCc-ccH---HHHHHHHHHhC--------
Confidence 3457888999999999887 6554333 2 2346667754 322 22333333332
Q ss_pred CCCcceEEEecCCChhhhhhhccccccccccCCC--------ccccCCCccchhhcccceEeeecccccccccccccccc
Q 001879 803 IGDLLKVIFVPDYNVSVAELLIPASELSQHISTA--------GMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEEN 874 (1001)
Q Consensus 803 i~~~LKVVFlpnYnVslAe~LipasDls~nista--------g~EASGTSnMKfamNG~l~igTlDGanvEI~e~vG~eN 874 (1001)
+ +|.|+..-.=.-...++.+||+....|.. -.|..|++-+-+|.-|++.|+|--|..-|+.+..|.++
T Consensus 212 --~--~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~~~~~ 287 (342)
T 2iuy_A 212 --S--TVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVV 287 (342)
T ss_dssp --T--TEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGGEEEC
T ss_pred --C--CEEEeccCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhcccCCCc
Confidence 2 58887765443346778999999887761 16999999999999999999998888888876533467
Q ss_pred eEecccchhh
Q 001879 875 FFLFGARAHE 884 (1001)
Q Consensus 875 ~flFG~~~~e 884 (1001)
+++|..+.++
T Consensus 288 g~~~~~d~~~ 297 (342)
T 2iuy_A 288 GYGTDFAPDE 297 (342)
T ss_dssp CSSSCCCHHH
T ss_pred eEEcCCCHHH
Confidence 7877643333
No 22
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=89.93 E-value=1.2 Score=41.46 Aligned_cols=112 Identities=19% Similarity=0.159 Sum_probs=76.6
Q ss_pred ceeccccccchhhhhhhhhhhHHHHHHHHHhcChhhhhccccceEEEEeccCCCCcHHHHHHHHHHHHHhhhhcCCcCCC
Q 001879 725 MFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIG 804 (1001)
Q Consensus 725 lfdvqvKRiheYKRQlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFgGKA~P~y~~AK~IIk~I~~va~~iN~Dp~i~ 804 (1001)
+..+++=|+..+|...+ ++..+.+ +++ . .+..+++.|.. |. ...+.+++.+.+-
T Consensus 3 ~~i~~~G~~~~~Kg~~~-li~a~~~---l~~-~--------~~~~l~i~G~g-~~---~~~~~~~~~~~~~--------- 56 (166)
T 3qhp_A 3 FKIAMVGRYSNEKNQSV-LIKAVAL---SKY-K--------QDIVLLLKGKG-PD---EKKIKLLAQKLGV--------- 56 (166)
T ss_dssp EEEEEESCCSTTTTHHH-HHHHHHT---CTT-G--------GGEEEEEECCS-TT---HHHHHHHHHHHTC---------
T ss_pred eEEEEEeccchhcCHHH-HHHHHHH---hcc-C--------CCeEEEEEeCC-cc---HHHHHHHHHHcCC---------
Confidence 45678889999999887 6655443 322 1 24578888863 22 2445555544431
Q ss_pred CcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccc-eEeeecc-cccccccc
Q 001879 805 DLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGC-ILIGTLD-GANVEIRQ 868 (1001)
Q Consensus 805 ~~LKVVFlpnYnVslAe~LipasDls~nistag~EASGTSnMKfamNG~-l~igTlD-GanvEI~e 868 (1001)
+|.| .-..-+-...++.+||+....|. .|..|.+-+-+|..|+ +.|+|-+ |..-|+.+
T Consensus 57 ---~v~~-g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~ 116 (166)
T 3qhp_A 57 ---KAEF-GFVNSNELLEILKTCTLYVHAAN--VESEAIACLEAISVGIVPVIANSPLSATRQFAL 116 (166)
T ss_dssp ---EEEC-CCCCHHHHHHHHTTCSEEEECCC--SCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCS
T ss_pred ---eEEE-eecCHHHHHHHHHhCCEEEECCc--ccCccHHHHHHHhcCCCcEEeeCCCCchhhhcc
Confidence 4666 44444556678899999998777 6999999999999998 9999654 55555543
No 23
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=84.81 E-value=8.9 Score=42.86 Aligned_cols=104 Identities=12% Similarity=0.082 Sum_probs=68.0
Q ss_pred eeccccccchhhhhhhhhhhHHHHHHHHHhcChhhhhccccceEEEEeccCCCCcHHHHHHHHHHHHHhhhhcCCcCCC-
Q 001879 726 FDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIG- 804 (1001)
Q Consensus 726 fdvqvKRiheYKRQlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFgGKA~P~y~~AK~IIk~I~~va~~iN~Dp~i~- 804 (1001)
+.+++-|+.. |.... ++..+.+ |++..| ...+++.|..-| .-..+.+++...+ +.
T Consensus 378 ~v~~~g~~~~-K~~~~-li~a~~~---l~~~~~--------~~~l~i~G~~g~---~~~~l~~~~~~~~--------l~~ 433 (568)
T 2vsy_A 378 VVLCCFNNSY-KLNPQ-SMARMLA---VLREVP--------DSVLWLLSGPGE---ADARLRAFAHAQG--------VDA 433 (568)
T ss_dssp CEEEECCCGG-GCCHH-HHHHHHH---HHHHCT--------TCEEEEECCSTT---HHHHHHHHHHHTT--------CCG
T ss_pred EEEEeCCccc-cCCHH-HHHHHHH---HHHhCC--------CcEEEEecCCHH---HHHHHHHHHHHcC--------CCh
Confidence 3448889888 98876 6655444 332121 245677774222 2344555554433 22
Q ss_pred CcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeee
Q 001879 805 DLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGT 858 (1001)
Q Consensus 805 ~~LKVVFlpnYnVslAe~LipasDls~nistag~EASGTSnMKfamNG~l~igT 858 (1001)
+ +|+|+.--.-.-...++.+|||....|.. ..|++-+=+|.-|++.|+.
T Consensus 434 ~--~v~~~g~~~~~~~~~~~~~adv~v~ps~~---~~g~~~lEAma~G~Pvv~~ 482 (568)
T 2vsy_A 434 Q--RLVFMPKLPHPQYLARYRHADLFLDTHPY---NAHTTASDALWTGCPVLTT 482 (568)
T ss_dssp G--GEEEECCCCHHHHHHHGGGCSEEECCSSS---CCSHHHHHHHHTTCCEEBC
T ss_pred h--HEEeeCCCCHHHHHHHHhcCCEEeeCCCC---CCcHHHHHHHhCCCCEEec
Confidence 3 69998864433445678999999988775 7899999999999999994
No 24
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=79.72 E-value=12 Score=42.58 Aligned_cols=142 Identities=7% Similarity=0.012 Sum_probs=83.5
Q ss_pred CcceeccccccchhhhhhhhhhhHHHHHHHHHhcChhhhhccccceEEEEeccCCCCcH-HHHHHHHHHHHHhhhhcCCc
Q 001879 723 DAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYV-QAKRIVKFITDVGATVNHDP 801 (1001)
Q Consensus 723 dslfdvqvKRiheYKRQlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFgGKA~P~y~-~AK~IIk~I~~va~~iN~Dp 801 (1001)
+..++++|-|+...|.... +|.-+.++.+ + .|.-+ ...++|..|....++. .-..+-+.+.+++..||..-
T Consensus 254 ~~~vil~VgRl~~~Kgi~~-ll~A~~~ll~--~-~p~~~----~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~ 325 (482)
T 1uqt_A 254 NVQNIFSVERLDYSKGLPE-RFLAYEALLE--K-YPQHH----GKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKY 325 (482)
T ss_dssp TCEEEEEECCBCGGGCHHH-HHHHHHHHHH--H-CGGGT----TTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCcccCCHHH-HHHHHHHHHH--h-Ccccc----CcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhc
Confidence 4567889999999998877 7766665532 2 34322 2356766665332221 12234444444444444211
Q ss_pred CCCCcceEEEecC-CChhhhhhhccccccccccCCCccccCCCccchhhccc------ceEeeecccccccccccccccc
Q 001879 802 EIGDLLKVIFVPD-YNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNG------CILIGTLDGANVEIRQEVGEEN 874 (1001)
Q Consensus 802 ~i~~~LKVVFlpn-YnVslAe~LipasDls~nistag~EASGTSnMKfamNG------~l~igTlDGanvEI~e~vG~eN 874 (1001)
...+.-.|+|+.. ..-+--..+..+|||-...|. .|.-|..-+-+|.-| .+.+|+..|+.-|+ ++
T Consensus 326 g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~--~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l------~~ 397 (482)
T 1uqt_A 326 GQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPL--RDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL------TS 397 (482)
T ss_dssp CBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCS--SBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTC------TT
T ss_pred ccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCC--cccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHh------CC
Confidence 1112224887643 344444578899999999887 476676666666655 57777777877665 26
Q ss_pred eEeccc
Q 001879 875 FFLFGA 880 (1001)
Q Consensus 875 ~flFG~ 880 (1001)
++++..
T Consensus 398 g~lv~p 403 (482)
T 1uqt_A 398 ALIVNP 403 (482)
T ss_dssp SEEECT
T ss_pred eEEECC
Confidence 677653
No 25
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=76.10 E-value=25 Score=36.74 Aligned_cols=64 Identities=17% Similarity=0.049 Sum_probs=43.1
Q ss_pred eEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecc-cccccccccccccceEecccc
Q 001879 808 KVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLD-GANVEIRQEVGEENFFLFGAR 881 (1001)
Q Consensus 808 KVVFlpnYnVslAe~LipasDls~nistag~EASGTSnMKfamNG~l~igTlD-GanvEI~e~vG~eN~flFG~~ 881 (1001)
+|.|+..-.-.-...++.+||+-..-| |+.-+=+|.-|++.|.|-. |...|+.+. .+++++..+
T Consensus 264 ~v~~~g~~~~~~~~~~~~~ad~~v~~S-------g~~~lEA~a~G~PvI~~~~~~~~~e~v~~---g~g~lv~~d 328 (384)
T 1vgv_A 264 NVILIDPQEYLPFVWLMNHAWLILTDS-------GGIQEEAPSLGKPVLVMRDTTERPEAVTA---GTVRLVGTD 328 (384)
T ss_dssp TEEEECCCCHHHHHHHHHHCSEEEESS-------STGGGTGGGGTCCEEEESSCCSCHHHHHH---TSEEEECSS
T ss_pred CEEEeCCCCHHHHHHHHHhCcEEEECC-------cchHHHHHHcCCCEEEccCCCCcchhhhC---CceEEeCCC
Confidence 588864322234456779999977544 5556789999999999976 666665422 277777543
No 26
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=75.51 E-value=11 Score=39.32 Aligned_cols=65 Identities=15% Similarity=0.054 Sum_probs=43.5
Q ss_pred eEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecc-cccccccccccccceEecccch
Q 001879 808 KVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLD-GANVEIRQEVGEENFFLFGARA 882 (1001)
Q Consensus 808 KVVFlpnYnVslAe~LipasDls~nistag~EASGTSnMKfamNG~l~igTlD-GanvEI~e~vG~eN~flFG~~~ 882 (1001)
+|.|+....-.-...++.+||+-..-| |+.-+=+|.-|++.|+|-+ |...|+.+. .+++++..+.
T Consensus 264 ~v~~~g~~~~~~~~~~~~~ad~~v~~s-------g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~---g~g~~v~~d~ 329 (375)
T 3beo_A 264 RIHLIEPLDVIDFHNVAARSYLMLTDS-------GGVQEEAPSLGVPVLVLRDTTERPEGIEA---GTLKLAGTDE 329 (375)
T ss_dssp TEEEECCCCHHHHHHHHHTCSEEEECC-------HHHHHHHHHHTCCEEECSSCCSCHHHHHT---TSEEECCSCH
T ss_pred CEEEeCCCCHHHHHHHHHhCcEEEECC-------CChHHHHHhcCCCEEEecCCCCCceeecC---CceEEcCCCH
Confidence 588865443334456778999987543 4446679999999999966 666665432 2777774433
No 27
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=52.65 E-value=45 Score=36.74 Aligned_cols=68 Identities=10% Similarity=0.052 Sum_probs=51.4
Q ss_pred eEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccccccccccceEeccc
Q 001879 808 KVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 880 (1001)
Q Consensus 808 KVVFlpnYnVslAe~LipasDls~nistag~EASGTSnMKfamNG~l~igTlDGanvEI~e~vG~eN~flFG~ 880 (1001)
+|.|+.--.-+-...++.+||+....|. .|.-|..-+=+|.-|++.|++- |...|+.+. ++|++++-.
T Consensus 296 ~v~f~G~~~~~~l~~~~~~adv~v~pS~--~E~~g~~~lEAmA~G~PVV~~~-~g~~e~v~~--~~~G~lv~~ 363 (413)
T 2x0d_A 296 HLNSLGKLTLEDYADLLKRSSIGISLMI--SPHPSYPPLEMAHFGLRVITNK-YENKDLSNW--HSNIVSLEQ 363 (413)
T ss_dssp EEEEEESCCHHHHHHHHHHCCEEECCCS--SSSCCSHHHHHHHTTCEEEEEC-BTTBCGGGT--BTTEEEESS
T ss_pred cEEEcCCCCHHHHHHHHHhCCEEEEecC--CCCCCcHHHHHHhCCCcEEEeC-CCcchhhhc--CCCEEEeCC
Confidence 7899876555555667899999988876 3666777789999999999974 445677654 368988853
No 28
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=45.49 E-value=66 Score=33.28 Aligned_cols=103 Identities=7% Similarity=-0.053 Sum_probs=61.4
Q ss_pred CCCcc-eeccccccchhhhhhhhhhhHHHHHHHHHhcChhhhhccccceEEEEeccCCCCcHHHHHHHHHHHHHhhhhcC
Q 001879 721 SPDAM-FDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 799 (1001)
Q Consensus 721 dpdsl-fdvqvKRiheYKRQlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFgGKA~P~y~~AK~IIk~I~~va~~iN~ 799 (1001)
+++.. +.+.+.|+...|...+ ++..+.+ +++ . -+.++++|... + +.+.+++.+.+
T Consensus 180 ~~~~~~il~~~g~~~~~k~~~~-li~a~~~---l~~-----~-----~~~l~i~G~~~--~---~~l~~~~~~~~----- 235 (364)
T 1f0k_A 180 REGPVRVLVVGGSQGARILNQT-MPQVAAK---LGD-----S-----VTIWHQSGKGS--Q---QSVEQAYAEAG----- 235 (364)
T ss_dssp CCSSEEEEEECTTTCCHHHHHH-HHHHHHH---HGG-----G-----EEEEEECCTTC--H---HHHHHHHHHTT-----
T ss_pred CCCCcEEEEEcCchHhHHHHHH-HHHHHHH---hcC-----C-----cEEEEEcCCch--H---HHHHHHHhhcC-----
Confidence 34443 4556788888887665 4443332 321 1 12356677654 1 34444443332
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeeccc
Q 001879 800 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDG 861 (1001)
Q Consensus 800 Dp~i~~~LKVVFlpnYnVslAe~LipasDls~nistag~EASGTSnMKfamNG~l~igTlDG 861 (1001)
+ + +|.|+..- .-...++.+||+-...| | |++-+-+|.-|++.|+|--|
T Consensus 236 ---~-~--~v~~~g~~--~~~~~~~~~ad~~v~~s--g----~~~~~EAma~G~Pvi~~~~~ 283 (364)
T 1f0k_A 236 ---Q-P--QHKVTEFI--DDMAAAYAWADVVVCRS--G----ALTVSEIAAAGLPALFVPFQ 283 (364)
T ss_dssp ---C-T--TSEEESCC--SCHHHHHHHCSEEEECC--C----HHHHHHHHHHTCCEEECCCC
T ss_pred ---C-C--ceEEecch--hhHHHHHHhCCEEEECC--c----hHHHHHHHHhCCCEEEeeCC
Confidence 1 1 47777653 34456788999988765 2 56667799999999999444
No 29
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=33.02 E-value=1.5e+02 Score=34.45 Aligned_cols=137 Identities=13% Similarity=0.052 Sum_probs=79.4
Q ss_pred cceeccccccchhhhhhhhhhhHHHHHHHHHhcChhhhhccccceEEEEeccCCCCcH-HHHHHHHHHHHHhhhhcCCcC
Q 001879 724 AMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYV-QAKRIVKFITDVGATVNHDPE 802 (1001)
Q Consensus 724 slfdvqvKRiheYKRQlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFgGKA~P~y~-~AK~IIk~I~~va~~iN~Dp~ 802 (1001)
.-++++|-|+...|-... +|.-. ++. ++ .|.- ..+++|..|....++. .-..+-+.|.+++.-||..-
T Consensus 281 ~~lIl~VgRLd~~KGi~~-lL~Af-~ll--~~-~P~~-----~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~- 349 (496)
T 3t5t_A 281 HRLVVHSGRTDPIKNAER-AVRAF-VLA--AR-GGGL-----EKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAEL- 349 (496)
T ss_dssp SEEEEEEEESSGGGCHHH-HHHHH-HHH--HH-TSSC-----TTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHH-
T ss_pred ceEEEEcccCccccCHHH-HHHHH-HHH--Hh-Cccc-----ceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhcccc-
Confidence 457888999999888776 66555 442 22 3331 1245555554333332 22344455555555555210
Q ss_pred CCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhc----ccceEeeecccccccccccccccceEec
Q 001879 803 IGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAM----NGCILIGTLDGANVEIRQEVGEENFFLF 878 (1001)
Q Consensus 803 i~~~LKVVFlpnYnVslAe~LipasDls~nistag~EASGTSnMKfam----NG~l~igTlDGanvEI~e~vG~eN~flF 878 (1001)
+ .++|+|+..-...---.+..+|||-...|++ |-=|.--+-+|. .|.+.+|..-|+--|+. ++++++
T Consensus 350 -g-~~~V~f~g~v~~~el~aly~~ADv~vv~Slr--EGfgLv~~EamA~~~~~g~lVlSe~aGa~~~l~-----~~allV 420 (496)
T 3t5t_A 350 -G-SDTVRIDNDNDVNHTIACFRRADLLIFNSTV--DGQNLSTFEAPLVNERDADVILSETCGAAEVLG-----EYCRSV 420 (496)
T ss_dssp -C-TTSEEEEECCCHHHHHHHHHHCSEEEECCSS--BSCCSHHHHHHHHCSSCCEEEEETTBTTHHHHG-----GGSEEE
T ss_pred -C-CcCEEEeCCCCHHHHHHHHHhccEEEECccc--ccCChhHHHHHHhCCCCCCEEEeCCCCCHHHhC-----CCEEEE
Confidence 1 1168888643444445678999999888875 433444344333 47899998888876652 356666
Q ss_pred cc
Q 001879 879 GA 880 (1001)
Q Consensus 879 G~ 880 (1001)
-.
T Consensus 421 nP 422 (496)
T 3t5t_A 421 NP 422 (496)
T ss_dssp CT
T ss_pred CC
Confidence 43
No 30
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=28.43 E-value=1.7e+02 Score=31.75 Aligned_cols=106 Identities=11% Similarity=0.062 Sum_probs=70.4
Q ss_pred ceeccccccchhhhhhhhhhhHHHHHHHHHhcChhhhhccccceEEEEeccCCCCcHHHHHHHHHHHHHhhhhcCCcCCC
Q 001879 725 MFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIG 804 (1001)
Q Consensus 725 lfdvqvKRiheYKRQlLNil~ii~ry~~ik~~~~~~r~~~~~Pr~~IFgGKA~P~y~~AK~IIk~I~~va~~iN~Dp~i~ 804 (1001)
...+++=|+.++|.. +..+++.. ....+++.|.. | + .+..+.
T Consensus 223 ~~i~~vGrl~~~Kg~----------~~~l~~~~--------~~~~l~ivG~g-~---------------~----~~~~l~ 264 (406)
T 2hy7_A 223 IHAVAVGSMLFDPEF----------FVVASKAF--------PQVTFHVIGSG-M---------------G----RHPGYG 264 (406)
T ss_dssp EEEEEECCTTBCHHH----------HHHHHHHC--------TTEEEEEESCS-S---------------C----CCTTCC
T ss_pred cEEEEEeccccccCH----------HHHHHHhC--------CCeEEEEEeCc-h---------------H----HhcCCC
Confidence 567888999999987 12232211 13567777843 2 1 122234
Q ss_pred CcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhh-------cccceEeeecccccccccccccccceEe
Q 001879 805 DLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFA-------MNGCILIGTLDGANVEIRQEVGEENFFL 877 (1001)
Q Consensus 805 ~~LKVVFlpnYnVslAe~LipasDls~nistag~EASGTSnMKfa-------mNG~l~igTlDGanvEI~e~vG~eN~fl 877 (1001)
+ +|.|+.--.-+-...++.+||+...-|. .|..|..-+-+| .-|++.|+| |. +. +++++++
T Consensus 265 ~--~V~f~G~~~~~~l~~~~~~adv~v~ps~--~E~~~~~~lEAm~Kl~eYla~G~PVIas-~~----v~---~~~~G~l 332 (406)
T 2hy7_A 265 D--NVIVYGEMKHAQTIGYIKHARFGIAPYA--SEQVPVYLADSSMKLLQYDFFGLPAVCP-NA----VV---GPYKSRF 332 (406)
T ss_dssp T--TEEEECCCCHHHHHHHHHTCSEEECCBS--CSCCCTTHHHHCHHHHHHHHHTCCEEEE-GG----GT---CSCSSEE
T ss_pred C--CEEEcCCCCHHHHHHHHHhcCEEEECCC--cccCchHHHHHHHHHHHHhhCCCcEEEe-hh----cc---cCcceEE
Confidence 4 6999876544445567899999998776 588888888888 999999999 43 22 3457777
Q ss_pred -ccc
Q 001879 878 -FGA 880 (1001)
Q Consensus 878 -FG~ 880 (1001)
+-.
T Consensus 333 ~v~~ 336 (406)
T 2hy7_A 333 GYTP 336 (406)
T ss_dssp EECT
T ss_pred EeCC
Confidence 643
Done!