BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001884
(1000 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9QYI4|DJB12_MOUSE DnaJ homolog subfamily B member 12 OS=Mus musculus GN=Dnajb12 PE=2
SV=2
Length = 376
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 76/172 (44%), Gaps = 44/172 (25%)
Query: 1 MDCNKDEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQD------LENISQMIMVCDVH 54
M+ NKDEA R IA +QSN A +F KAQ LY +E+++Q H
Sbjct: 1 MESNKDEAERCISIALKAIQSNQPERALRFLEKAQRLYPTPRVSALIESLNQKPQSTGDH 60
Query: 55 C-------------------SAENKLFGNE-------------------MDWYGLLQIEQ 76
SA + G E D+Y +L + +
Sbjct: 61 PQPTDTTHTTTKKAGGTETPSANGEAGGGESAKGYTSEQVAAVKRVKQCKDYYEILGVSR 120
Query: 77 TANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSLHD 128
+A++ +KK YRK AL+ HPDKN PGA AFK IG A VL + +KR +D
Sbjct: 121 SASDEDLKKAYRKLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYD 172
>sp|O89114|DNJB5_MOUSE DnaJ homolog subfamily B member 5 OS=Mus musculus GN=Dnajb5 PE=2
SV=1
Length = 348
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 41/62 (66%)
Query: 67 DWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSL 126
D+Y +L I ANE IKK YRK AL+ HPDKNK P AE FK I EA VL D KRSL
Sbjct: 4 DYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKKRSL 63
Query: 127 HD 128
+D
Sbjct: 64 YD 65
>sp|Q9NXW2|DJB12_HUMAN DnaJ homolog subfamily B member 12 OS=Homo sapiens GN=DNAJB12 PE=1
SV=4
Length = 375
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 74/171 (43%), Gaps = 43/171 (25%)
Query: 1 MDCNKDEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQD------LENISQMIMVC--- 51
M+ NKDEA R IA +QSN A +F KAQ LY +E+++Q
Sbjct: 1 MESNKDEAERCISIALKAIQSNQPDRALRFLEKAQRLYPTPRVRALIESLNQKPQTAGDQ 60
Query: 52 ----DVHCSAENKLFGNEM------------------------------DWYGLLQIEQT 77
D + K G + D+Y +L + +
Sbjct: 61 PPPTDTTHATHRKAGGTDAPSANGEAGGESTKGYTAEQVAAVKRVKQCKDYYEILGVSRG 120
Query: 78 ANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSLHD 128
A++ +KK YR+ AL+ HPDKN PGA AFK IG A VL + +KR +D
Sbjct: 121 ASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYD 171
>sp|Q58DR2|DJB12_BOVIN DnaJ homolog subfamily B member 12 OS=Bos taurus GN=DNAJB12 PE=2
SV=1
Length = 370
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 75/171 (43%), Gaps = 43/171 (25%)
Query: 1 MDCNKDEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQD------LENISQMIM----- 49
M+ NKDEA R IA +QSN A +F KAQ LY +E+++Q
Sbjct: 1 MESNKDEAERCISIALKAIQSNQPDRALRFLEKAQRLYPTPRVHALIESLNQKPQPAGDQ 60
Query: 50 -------------VCDVHCSAENKLFGNE-------------------MDWYGLLQIEQT 77
+ ++ N G E D+Y +L + +
Sbjct: 61 PQPTEATHTTHRKAAGANTASANGEAGGESTKGYTAEQVAAVKRVKQCKDYYEILGVSRG 120
Query: 78 ANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSLHD 128
A++ +KK YRK AL+ HPDKN PGA AFK IG A VL + +KR +D
Sbjct: 121 ASDEDLKKAYRKLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYD 171
>sp|Q5BIP8|DNJB5_BOVIN DnaJ homolog subfamily B member 5 OS=Bos taurus GN=DNAJB5 PE=2 SV=1
Length = 348
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 40/62 (64%)
Query: 67 DWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSL 126
D+Y +L I ANE IKK YRK AL+ HPDKNK P AE FK I EA VL D KR L
Sbjct: 4 DYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKKRGL 63
Query: 127 HD 128
+D
Sbjct: 64 YD 65
>sp|O75953|DNJB5_HUMAN DnaJ homolog subfamily B member 5 OS=Homo sapiens GN=DNAJB5 PE=1
SV=1
Length = 348
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 40/62 (64%)
Query: 67 DWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSL 126
D+Y +L I ANE IKK YRK AL+ HPDKNK P AE FK I EA VL D KR L
Sbjct: 4 DYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKKRGL 63
Query: 127 HD 128
+D
Sbjct: 64 YD 65
>sp|A6Q486|DNAJ_NITSB Chaperone protein DnaJ OS=Nitratiruptor sp. (strain SB155-2)
GN=dnaJ PE=3 SV=1
Length = 373
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 65 EMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKN-KFPGAETAFKLIGEAQRVLLDKDK 123
++D+Y LL++++ A+ IKK YRK AL+ HPD+N P AE FKLI EA +VL D++K
Sbjct: 3 DIDYYELLEVDRNASFEEIKKAYRKLALKYHPDRNPDNPEAEEKFKLINEAYQVLSDEEK 62
Query: 124 RSLHDMKRKASV 135
R+L+D KA +
Sbjct: 63 RALYDQYGKAGL 74
>sp|Q9FH28|DNJ49_ARATH Chaperone protein dnaJ 49 OS=Arabidopsis thaliana GN=ATJ49 PE=2
SV=2
Length = 354
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 1 MDCNKDEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIMVCDVHCSA--- 57
MD NKD+A R IAE + S D A KF A+ L L ++ +++ CD S
Sbjct: 1 MDGNKDDASRCLRIAEDAIVSGDKERALKFINMAKRLNPSL-SVDELVAACDNLDSVSRN 59
Query: 58 -------------ENKLFGNEM-----------------DWYGLLQIEQTANEATIKKQY 87
++KL +M D+Y +L +E+ + I+K Y
Sbjct: 60 SSVSEKLKTMDGDDDKLETGKMKYTEENVDLVRNIIRNNDYYAILGLEKNCSVDEIRKAY 119
Query: 88 RKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSLHD 128
RK +L++HPDKNK PG+E AFK + +A L D + R D
Sbjct: 120 RKLSLKVHPDKNKAPGSEEAFKKVSKAFTCLSDGNSRRQFD 160
>sp|A8EUC7|DNAJ_ARCB4 Chaperone protein DnaJ OS=Arcobacter butzleri (strain RM4018)
GN=dnaJ PE=3 SV=1
Length = 372
Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 52/74 (70%), Gaps = 5/74 (6%)
Query: 65 EMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPG---AETAFKLIGEAQRVLLDK 121
E+D+Y LL+I + ++++TIKK YR+ A++ HPDKN PG AE FK I EA +VL D
Sbjct: 3 EIDYYELLEISRNSDKSTIKKAYRQMAMKYHPDKN--PGDNEAEEKFKAINEAYQVLSDD 60
Query: 122 DKRSLHDMKRKASV 135
+K+S++D KA +
Sbjct: 61 EKKSIYDRYGKAGL 74
>sp|P48353|HLJ1_YEAST Protein HLJ1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=HLJ1 PE=1 SV=1
Length = 224
Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 55/90 (61%), Gaps = 12/90 (13%)
Query: 39 QDLENISQMIMVCDVHCSAENKLFGNEMDWYGLLQIEQTANEATIKKQYRKFALQLHPDK 98
+D E I+ I+ D H ++Y +L++++ A ++ IKK YRK A++LHPDK
Sbjct: 5 EDQEKIALEILSKDKH------------EFYEILKVDRKATDSEIKKAYRKLAIKLHPDK 52
Query: 99 NKFPGAETAFKLIGEAQRVLLDKDKRSLHD 128
N P A AFK+I A VL +++KRS++D
Sbjct: 53 NSHPKAGEAFKVINRAFEVLSNEEKRSIYD 82
>sp|Q24133|DNAJ1_DROME DnaJ protein homolog 1 OS=Drosophila melanogaster GN=DnaJ-1 PE=1
SV=3
Length = 334
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 42/62 (67%)
Query: 67 DWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSL 126
D+Y +L +E+ A++ IKK YRK AL+ HPDKNK P AE FK I EA VL DK KR +
Sbjct: 4 DFYKILGLERKASDDEIKKAYRKLALKYHPDKNKSPQAEERFKEIAEAYEVLSDKKKRDI 63
Query: 127 HD 128
D
Sbjct: 64 FD 65
>sp|Q8TQR1|DNAJ_METAC Chaperone protein DnaJ OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=dnaJ PE=3 SV=1
Length = 382
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 42/62 (67%)
Query: 67 DWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSL 126
D+Y +L + + A+ IKK YRK ALQ HPD+NK PGAE FK I EA VL D +KR+
Sbjct: 6 DYYEILGLPKDASVEDIKKTYRKLALQYHPDRNKDPGAEDKFKEISEAYAVLSDTEKRAQ 65
Query: 127 HD 128
+D
Sbjct: 66 YD 67
>sp|Q28I38|DJB14_XENTR DnaJ homolog subfamily B member 14 OS=Xenopus tropicalis GN=dnajb14
PE=2 SV=1
Length = 375
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 78/168 (46%), Gaps = 39/168 (23%)
Query: 1 MDCNKDEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLE---------------NIS 45
M+ N+DEA R IA++ +++ D A++F KA+ LY E N
Sbjct: 1 MESNRDEAERCVRIAKAAIEAGDKEKAKRFLSKAERLYPSSEARALLQAFEKNDTAGNGP 60
Query: 46 QMIMVC----------DVHCSA---------ENKLFGNEM-----DWYGLLQIEQTANEA 81
Q + D + SA +++L G + +Y +L + A E
Sbjct: 61 QSAKMAKGTEQPKAEKDSNASASSDTGKGHTQDQLDGVQRIKKCKTYYEVLGVSTDAGEE 120
Query: 82 TIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSLHDM 129
+KK YRK AL+ HPDKN PGA AFK IG A VL + +KR +D+
Sbjct: 121 DLKKAYRKLALKFHPDKNHAPGATEAFKKIGNAYAVLSNPEKRKQYDL 168
>sp|Q5R8J8|DNJB4_PONAB DnaJ homolog subfamily B member 4 OS=Pongo abelii GN=DNAJB4 PE=2
SV=1
Length = 337
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 42/62 (67%)
Query: 67 DWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSL 126
D+Y +L IE+ A++ IKK YRK AL+ HPDKNK P AE FK + EA VL D KR +
Sbjct: 4 DYYCILGIEKGASDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREI 63
Query: 127 HD 128
+D
Sbjct: 64 YD 65
>sp|Q9UDY4|DNJB4_HUMAN DnaJ homolog subfamily B member 4 OS=Homo sapiens GN=DNAJB4 PE=1
SV=1
Length = 337
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 42/62 (67%)
Query: 67 DWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSL 126
D+Y +L IE+ A++ IKK YRK AL+ HPDKNK P AE FK + EA VL D KR +
Sbjct: 4 DYYCILGIEKGASDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREI 63
Query: 127 HD 128
+D
Sbjct: 64 YD 65
>sp|B9KFK6|DNAJ_CAMLR Chaperone protein DnaJ OS=Campylobacter lari (strain RM2100 / D67 /
ATCC BAA-1060) GN=dnaJ PE=3 SV=1
Length = 373
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 65 EMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPG-AETAFKLIGEAQRVLLDKDK 123
E+++Y +L+I QT+++ TIKK YRK AL+ HPD+N+ AE FKL+ EA VL + +K
Sbjct: 2 ELNYYEILEISQTSDKETIKKAYRKMALKYHPDRNQGDKEAEEKFKLVNEAYEVLSNDEK 61
Query: 124 RSLHDMKRKASVR 136
RS++D K ++
Sbjct: 62 RSIYDRYGKEGLK 74
>sp|Q2KIT4|DNJB4_BOVIN DnaJ homolog subfamily B member 4 OS=Bos taurus GN=DNAJB4 PE=2 SV=1
Length = 337
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 42/62 (67%)
Query: 67 DWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSL 126
D+Y +L IE+ A++ IKK YRK AL+ HPDKNK P AE FK + EA VL D KR +
Sbjct: 4 DYYCILGIEKGASDEDIKKAYRKQALRFHPDKNKSPQAEERFKEVAEAYEVLSDPKKREI 63
Query: 127 HD 128
+D
Sbjct: 64 YD 65
>sp|P0CW06|DNAJ_METMZ Chaperone protein DnaJ OS=Methanosarcina mazei GN=dnaJ PE=3 SV=1
Length = 389
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%)
Query: 62 FGNEMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDK 121
+ D+Y +L + + ++ IKK YRK ALQ HPD+NK PGAE FK I EA VL D
Sbjct: 1 MATKRDYYEILGLSKDSSVEDIKKTYRKLALQYHPDRNKEPGAEEKFKEISEAYAVLSDA 60
Query: 122 DKRSLHD 128
+KR+ +D
Sbjct: 61 EKRAQYD 67
>sp|P0CW07|DNAJ_METMA Chaperone protein DnaJ OS=Methanosarcina mazei (strain ATCC BAA-159
/ DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=dnaJ
PE=3 SV=1
Length = 389
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%)
Query: 62 FGNEMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDK 121
+ D+Y +L + + ++ IKK YRK ALQ HPD+NK PGAE FK I EA VL D
Sbjct: 1 MATKRDYYEILGLSKDSSVEDIKKTYRKLALQYHPDRNKEPGAEEKFKEISEAYAVLSDA 60
Query: 122 DKRSLHD 128
+KR+ +D
Sbjct: 61 EKRAQYD 67
>sp|O25890|DNAJ_HELPY Chaperone protein DnaJ OS=Helicobacter pylori (strain ATCC 700392 /
26695) GN=dnaJ PE=3 SV=1
Length = 369
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 65 EMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPG-AETAFKLIGEAQRVLLDKDK 123
E+ +Y +L++E+ +N+ TIKK YRK AL+ HPD+N AE FKLI EA VL D+ K
Sbjct: 2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKK 61
Query: 124 RSLHDMKRKASVRRPVA 140
R+L+D K + + A
Sbjct: 62 RALYDRYGKKGLNQAGA 78
>sp|Q9UXR9|DNAJ_METTE Chaperone protein DnaJ OS=Methanosarcina thermophila GN=dnaJ PE=3
SV=1
Length = 387
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 41/62 (66%)
Query: 67 DWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSL 126
D+Y +L + + A IKK YRK AL+ HPD+NK PGAE FK I EA VL D +KR+
Sbjct: 6 DYYEILGLSRDATPEDIKKSYRKLALKYHPDRNKEPGAEEKFKEISEAYAVLSDPEKRAQ 65
Query: 127 HD 128
+D
Sbjct: 66 YD 67
>sp|Q7ZXQ8|DJB14_XENLA DnaJ homolog subfamily B member 14 OS=Xenopus laevis GN=dnajb14
PE=2 SV=1
Length = 371
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 37/165 (22%)
Query: 1 MDCNKDEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIMVCDVHCSAENK 60
M+ N+DEA R I ++ +++ D AR+F KA+ LY E ++ + + +A N
Sbjct: 1 MESNRDEAERCVRIGKAAIEAGDKEKARRFFSKAERLYPSSE-ARVLLDALEKNDTAGNG 59
Query: 61 LFGNEMD------------------------------------WYGLLQIEQTANEATIK 84
+M +Y +L + A E +K
Sbjct: 60 PQSEKMSKSTEQPKAEKDSSGDTGKGHTQDQVDGVQRIKKCKTYYEVLGVSPDAGEEDLK 119
Query: 85 KQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSLHDM 129
K YRK AL+ HPDKN PGA AFK IG A VL + +KR +D+
Sbjct: 120 KAYRKLALKFHPDKNHAPGATEAFKKIGNAYAVLSNPEKRKQYDL 164
>sp|Q9ZJQ2|DNAJ_HELPJ Chaperone protein DnaJ OS=Helicobacter pylori (strain J99) GN=dnaJ
PE=3 SV=1
Length = 369
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 65 EMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPG-AETAFKLIGEAQRVLLDKDK 123
E+ +Y +L++E+ +N+ TIKK YRK AL+ HPD+N AE FKLI EA VL D+ K
Sbjct: 2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLGDEKK 61
Query: 124 RSLHD 128
R+L+D
Sbjct: 62 RALYD 66
>sp|O85213|DNAJ_CAMJE Chaperone protein DnaJ OS=Campylobacter jejuni subsp. jejuni
serotype O:2 (strain NCTC 11168) GN=dnaJ PE=3 SV=2
Length = 373
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 4/114 (3%)
Query: 65 EMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPG-AETAFKLIGEAQRVLLDKDK 123
E+ +Y +L+I Q A++ TIKK YRK AL+ HPD+N+ AE FKL+ EA VL + +K
Sbjct: 2 EISYYEILEITQNADKETIKKAYRKMALKYHPDRNQGDKEAEDKFKLVNEAYEVLSNDEK 61
Query: 124 RSLHDMKRKASVRRPVAPYQPPQKPTYSNVGTRNNFGSTFTGSNFQHQRPQQPA 177
R+++D K +++ + ++G + S+F G F R ++ +
Sbjct: 62 RAIYDRYGKDALKGGGFGSSSSGFGGFEDLG---DIFSSFFGEGFGSSRRRKSS 112
>sp|Q5HTK3|DNAJ_CAMJR Chaperone protein DnaJ OS=Campylobacter jejuni (strain RM1221)
GN=dnaJ PE=3 SV=1
Length = 373
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 4/114 (3%)
Query: 65 EMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPG-AETAFKLIGEAQRVLLDKDK 123
E+ +Y +L+I Q A++ TIKK YRK AL+ HPD+N+ AE FKL+ EA VL + +K
Sbjct: 2 EISYYEILEITQNADKETIKKAYRKMALKYHPDRNQGDKEAEDKFKLVNEAYEVLSNDEK 61
Query: 124 RSLHDMKRKASVRRPVAPYQPPQKPTYSNVGTRNNFGSTFTGSNFQHQRPQQPA 177
R+++D K +++ + ++G + S+F G F R ++ +
Sbjct: 62 RAIYDRYGKDALKGGGFGSSSSGFGGFEDLG---DIFSSFFGEGFGSSRRRKSS 112
>sp|A1W0P5|DNAJ_CAMJJ Chaperone protein DnaJ OS=Campylobacter jejuni subsp. jejuni
serotype O:23/36 (strain 81-176) GN=dnaJ PE=3 SV=1
Length = 374
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 65 EMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPG-AETAFKLIGEAQRVLLDKDK 123
E+ +Y LL+I Q A++ TIKK YRK AL+ HPD+N+ AE FKL+ EA VL + +K
Sbjct: 2 EISYYELLEITQNADKETIKKAYRKMALKYHPDRNQGDKEAEDKFKLVNEAYEVLSNDEK 61
Query: 124 RSLHDMKRKASVR 136
R+++D K +++
Sbjct: 62 RAIYDRYGKDALK 74
>sp|Q9D832|DNJB4_MOUSE DnaJ homolog subfamily B member 4 OS=Mus musculus GN=Dnajb4 PE=2
SV=1
Length = 337
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%)
Query: 67 DWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSL 126
D+Y +L I++ A + +KK YRK AL+ HPDKNK P AE FK + EA VL D KR +
Sbjct: 4 DYYHILGIDKGATDEDVKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREI 63
Query: 127 HD 128
+D
Sbjct: 64 YD 65
>sp|A8FMW6|DNAJ_CAMJ8 Chaperone protein DnaJ OS=Campylobacter jejuni subsp. jejuni
serotype O:6 (strain 81116 / NCTC 11828) GN=dnaJ PE=3
SV=1
Length = 374
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 65 EMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPG-AETAFKLIGEAQRVLLDKDK 123
E+ +Y +L+I Q+A++ TIKK YRK AL+ HPD+N+ AE FKL+ EA VL + +K
Sbjct: 2 EISYYEILEITQSADKETIKKAYRKMALKYHPDRNQGDKEAEDKFKLVNEAYEVLSNDEK 61
Query: 124 RSLHDMKRKASVR 136
R+++D K +++
Sbjct: 62 RAIYDRYGKDALK 74
>sp|Q5NPS5|DNAJ_ZYMMO Chaperone protein DnaJ OS=Zymomonas mobilis subsp. mobilis (strain
ATCC 31821 / ZM4 / CP4) GN=dnaJ PE=3 SV=1
Length = 375
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 5/68 (7%)
Query: 64 NEMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPG---AETAFKLIGEAQRVLLD 120
+E+D+Y LL++E+TA++ TIK YR+ A++ HPD+N PG AE FK I EA L D
Sbjct: 2 SELDYYSLLEVERTADDKTIKTSYRRLAMRYHPDRN--PGDSDAEERFKAISEAYDCLKD 59
Query: 121 KDKRSLHD 128
KR+ +D
Sbjct: 60 PQKRAAYD 67
>sp|A5UYW4|DNAJ_ROSS1 Chaperone protein DnaJ OS=Roseiflexus sp. (strain RS-1) GN=dnaJ
PE=3 SV=1
Length = 370
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 67 DWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSL 126
D+Y +L +++ A++ IKK +R+ A Q HPD NK P AE FK I EA VL D +KRS+
Sbjct: 6 DYYEVLGVQRNASQDEIKKAFRRLARQYHPDVNKAPDAEAKFKEINEAYEVLSDPEKRSM 65
Query: 127 HD 128
+D
Sbjct: 66 YD 67
>sp|A7NS65|DNAJ_ROSCS Chaperone protein DnaJ OS=Roseiflexus castenholzii (strain DSM
13941 / HLO8) GN=dnaJ PE=3 SV=1
Length = 370
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 67 DWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSL 126
D+Y +L +++ A++ IKK +R+ A Q HPD NK P AE FK I EA VL D +KRS+
Sbjct: 6 DYYEVLGVQRNASQDEIKKAFRRLARQYHPDVNKAPDAEAKFKEINEAYEVLSDPEKRSM 65
Query: 127 HD 128
+D
Sbjct: 66 YD 67
>sp|P50027|DNAJH_SYNY3 DnAJ-like protein slr0093 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=slr0093 PE=4 SV=1
Length = 332
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 10/86 (11%)
Query: 67 DWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPG---AETAFKLIGEAQRVLLDKDK 123
D+Y +L + +TA+EA IKKQ+RK AL+ HPDKN PG AE FK I EA VL D +K
Sbjct: 8 DYYQILGVTKTASEAEIKKQFRKLALKYHPDKN--PGDKAAEEKFKEISEAYEVLSDPEK 65
Query: 124 RSLHDM-----KRKASVRRPVAPYQP 144
R +D ++ + +P Y P
Sbjct: 66 RQKYDQFGRYWQQAGTAGQPSGSYGP 91
>sp|Q9RUG2|DNAJ_DEIRA Chaperone protein DnaJ OS=Deinococcus radiodurans (strain ATCC
13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 /
NCIMB 9279 / R1 / VKM B-1422) GN=dnaJ PE=3 SV=2
Length = 376
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 41/63 (65%)
Query: 66 MDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRS 125
MD+Y LL + +TA+ IK YRK AL+LHPD+NK GA F + EA VL D +KR+
Sbjct: 1 MDYYELLGVSRTASADEIKSAYRKLALKLHPDRNKEEGAAEKFAQVSEAYSVLSDTEKRA 60
Query: 126 LHD 128
+D
Sbjct: 61 HYD 63
>sp|A7H2C0|DNAJ_CAMJD Chaperone protein DnaJ OS=Campylobacter jejuni subsp. doylei
(strain ATCC BAA-1458 / RM4099 / 269.97) GN=dnaJ PE=3
SV=1
Length = 374
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 65 EMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPG-AETAFKLIGEAQRVLLDKDK 123
E+ +Y +L+I Q A++ TIKK YRK AL+ HPD+N+ AE FKL+ EA VL + +K
Sbjct: 2 EISYYEILEITQNADKETIKKAYRKMALKYHPDRNQGDKEAEDKFKLVNEAYEVLSNDEK 61
Query: 124 RSLHDMKRKASVR 136
R+++D K +++
Sbjct: 62 RAIYDRYGKDALK 74
>sp|Q74IT7|DNAJ_LACJO Chaperone protein DnaJ OS=Lactobacillus johnsonii (strain CNCM
I-12250 / La1 / NCC 533) GN=dnaJ PE=3 SV=1
Length = 388
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%)
Query: 65 EMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKR 124
+ D+Y +L +++ A+E+ I K YRK A + HPD N PGAE +K + EA VL DK KR
Sbjct: 3 QRDYYDVLGVDKNASESEISKAYRKLAKKYHPDLNHEPGAEEKYKEVNEAYEVLHDKQKR 62
Query: 125 SLHDMKRKASV 135
+ +D +A V
Sbjct: 63 AQYDQFGQAGV 73
>sp|Q7NBW0|DNAJ_MYCGA Chaperone protein DnaJ OS=Mycoplasma gallisepticum (strain R(low /
passage 15 / clone 2)) GN=dnaJ PE=3 SV=2
Length = 391
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%)
Query: 67 DWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSL 126
D+Y +L++ ++A + IKK +RK A++ HPD+NK AE FK + EA VL D++KR L
Sbjct: 6 DYYEILEVSRSATQQDIKKAFRKLAMKYHPDRNKDSDAEEKFKEVNEAYEVLSDEEKRKL 65
Query: 127 HD 128
+D
Sbjct: 66 YD 67
>sp|O13633|YNF5_SCHPO Uncharacterized J domain-containing protein C17A3.05c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pi041 PE=1 SV=1
Length = 403
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 43/61 (70%)
Query: 68 WYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSLH 127
+Y +L +++T + IKK Y+K ALQLHPDKN P A+ AFK++ +A +VL D + R+ +
Sbjct: 114 YYEILDLKKTCTDTEIKKSYKKLALQLHPDKNHAPSADEAFKMVSKAFQVLSDPNLRAHY 173
Query: 128 D 128
D
Sbjct: 174 D 174
>sp|Q8TBM8|DJB14_HUMAN DnaJ homolog subfamily B member 14 OS=Homo sapiens GN=DNAJB14 PE=2
SV=1
Length = 379
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%)
Query: 67 DWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSL 126
++Y +L + + A + +KK YRK AL+ HPDKN PGA AFK IG A VL + +KR
Sbjct: 108 NYYEVLGVTKDAGDEDLKKAYRKLALKFHPDKNHAPGATDAFKKIGNAYAVLSNPEKRKQ 167
Query: 127 HDM 129
+D+
Sbjct: 168 YDL 170
>sp|Q149L6|DJB14_MOUSE DnaJ homolog subfamily B member 14 OS=Mus musculus GN=Dnajb14 PE=2
SV=1
Length = 379
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%)
Query: 67 DWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSL 126
++Y +L + + A + +KK YRK AL+ HPDKN PGA AFK IG A VL + +KR
Sbjct: 108 NYYEVLGVTKDAGDEDLKKAYRKLALKFHPDKNHAPGATDAFKKIGNAYAVLSNPEKRKQ 167
Query: 127 HDM 129
+D+
Sbjct: 168 YDL 170
>sp|Q0IIE8|DJB14_BOVIN DnaJ homolog subfamily B member 14 OS=Bos taurus GN=DNAJB14 PE=2
SV=1
Length = 379
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%)
Query: 67 DWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSL 126
++Y +L + + A + +KK YRK AL+ HPDKN PGA AFK IG A VL + +KR
Sbjct: 108 NYYEVLGVTKDAGDEDLKKAYRKLALKFHPDKNHAPGATDAFKKIGNAYAVLSNPEKRKQ 167
Query: 127 HDM 129
+D+
Sbjct: 168 YDL 170
>sp|P63966|DNAJ2_MYCTU Chaperone protein DnaJ 2 OS=Mycobacterium tuberculosis GN=dnaJ2
PE=3 SV=1
Length = 382
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%)
Query: 67 DWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSL 126
D+YGLL + + A++A IK+ YRK A +LHPD N A+ FK I A VL D DKR +
Sbjct: 4 DYYGLLGVSKNASDADIKRAYRKLARELHPDVNPDEAAQAKFKEISVAYEVLSDPDKRRI 63
Query: 127 HDM 129
D+
Sbjct: 64 VDL 66
>sp|P63967|DNAJ2_MYCBO Chaperone protein DnaJ 2 OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=dnaJ2 PE=3 SV=1
Length = 382
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%)
Query: 67 DWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSL 126
D+YGLL + + A++A IK+ YRK A +LHPD N A+ FK I A VL D DKR +
Sbjct: 4 DYYGLLGVSKNASDADIKRAYRKLARELHPDVNPDEAAQAKFKEISVAYEVLSDPDKRRI 63
Query: 127 HDM 129
D+
Sbjct: 64 VDL 66
>sp|P71500|DNAJ_MYCCT Chaperone protein DnaJ OS=Mycoplasma capricolum subsp. capricolum
(strain California kid / ATCC 27343 / NCTC 10154)
GN=dnaJ PE=3 SV=2
Length = 372
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Query: 67 DWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSL 126
D+Y +L + +TA+E I++ YRK A Q HPD NK P A I EA VLLDKDKR
Sbjct: 5 DYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQ 64
Query: 127 HDM--KRKASVRRPVAPYQPPQKPTYSNVGTR-----NNFGSTFTGSN-FQHQRPQQPAQ 178
+D R + + +SN+G+ N S F GSN +QR +
Sbjct: 65 YDQFGHRAFDNSSGFSSNFTDFEDLFSNMGSSGFSSFTNIFSDFFGSNKSDYQRSTKGQS 124
Query: 179 PGINGDPTF 187
I+ TF
Sbjct: 125 VSIDIYLTF 133
>sp|Q7M9T3|DNAJ_WOLSU Chaperone protein DnaJ OS=Wolinella succinogenes (strain ATCC 29543
/ DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W) GN=dnaJ
PE=3 SV=1
Length = 374
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 65 EMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPG-AETAFKLIGEAQRVLLDKDK 123
E D+Y +L+IE++A+ IKK YRK A++ HPD+N+ AE FK + EA +VL D+ K
Sbjct: 3 EFDYYEILEIERSASGEEIKKAYRKMAMKYHPDRNEGSSEAEEMFKRVNEAYQVLSDEGK 62
Query: 124 RSLHD 128
R L+D
Sbjct: 63 RQLYD 67
>sp|Q6MT07|DNAJ_MYCMS Chaperone protein DnaJ OS=Mycoplasma mycoides subsp. mycoides SC
(strain PG1) GN=dnaJ PE=3 SV=1
Length = 372
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 39/62 (62%)
Query: 67 DWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSL 126
D+Y +L + +TA+E I++ YRK A Q HPD NK P A I EA VLLDKDKR
Sbjct: 5 DYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQ 64
Query: 127 HD 128
+D
Sbjct: 65 YD 66
>sp|Q0AKB3|DNAJ_MARMM Chaperone protein DnaJ OS=Maricaulis maris (strain MCS10) GN=dnaJ
PE=3 SV=1
Length = 395
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%), Gaps = 5/65 (7%)
Query: 67 DWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPG---AETAFKLIGEAQRVLLDKDK 123
D+Y +L +++TA+E T+K YRK A++ HPD+N PG AE FK++GEA VL D +K
Sbjct: 5 DFYEVLGVDKTADEKTLKSAYRKQAMKYHPDRN--PGDAEAEAQFKVVGEAYSVLSDPNK 62
Query: 124 RSLHD 128
R+ +D
Sbjct: 63 RAAYD 67
>sp|Q6F150|DNAJ_MESFL Chaperone protein DnaJ OS=Mesoplasma florum (strain ATCC 33453 /
NBRC 100688 / NCTC 11704 / L1) GN=dnaJ PE=3 SV=1
Length = 374
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 67 DWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSL 126
D+Y +L + +T+ E IK YRK A + HPD NK GAE FK + EA VLLD DK++
Sbjct: 5 DYYEVLGVSKTSTEQEIKSAYRKLAKKYHPDMNKESGAEEKFKEVNEAASVLLDADKKAK 64
Query: 127 HD 128
+D
Sbjct: 65 YD 66
>sp|Q5FGQ8|DNAJ_EHRRG Chaperone protein DnaJ OS=Ehrlichia ruminantium (strain Gardel)
GN=dnaJ PE=3 SV=1
Length = 382
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 42/65 (64%), Gaps = 5/65 (7%)
Query: 67 DWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPG---AETAFKLIGEAQRVLLDKDK 123
D+Y LL + + A IKK YRK AL+ HPDKN PG AE FK + EA VL+DKDK
Sbjct: 5 DYYDLLGLSKNATPEEIKKAYRKMALKYHPDKN--PGDKAAEEKFKELSEAYDVLIDKDK 62
Query: 124 RSLHD 128
R+ +D
Sbjct: 63 RAAYD 67
>sp|Q044A8|DNAJ_LACGA Chaperone protein DnaJ OS=Lactobacillus gasseri (strain ATCC 33323
/ DSM 20243) GN=dnaJ PE=3 SV=1
Length = 388
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%)
Query: 65 EMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKR 124
+ D+Y +L +++ A+E+ I K YRK A + HPD N PGAE +K + EA VL DK K+
Sbjct: 3 QRDYYDVLGVDKNASESDINKAYRKLAKKYHPDLNHEPGAEEKYKEVNEAYEVLHDKQKK 62
Query: 125 SLHDMKRKASV 135
+ +D +A V
Sbjct: 63 AQYDQFGQAGV 73
>sp|Q5HCG4|DNAJ_EHRRW Chaperone protein DnaJ OS=Ehrlichia ruminantium (strain
Welgevonden) GN=dnaJ PE=3 SV=1
Length = 382
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 42/65 (64%), Gaps = 5/65 (7%)
Query: 67 DWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPG---AETAFKLIGEAQRVLLDKDK 123
D+Y LL + + A IKK YRK AL+ HPDKN PG AE FK + EA VL+DKDK
Sbjct: 5 DYYDLLGLSKNATPEEIKKAYRKMALKYHPDKN--PGDKAAEEKFKELSEAYDVLIDKDK 62
Query: 124 RSLHD 128
R+ +D
Sbjct: 63 RAAYD 67
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 400,633,425
Number of Sequences: 539616
Number of extensions: 18284059
Number of successful extensions: 49597
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 270
Number of HSP's that attempted gapping in prelim test: 47859
Number of HSP's gapped (non-prelim): 1759
length of query: 1000
length of database: 191,569,459
effective HSP length: 127
effective length of query: 873
effective length of database: 123,038,227
effective search space: 107412372171
effective search space used: 107412372171
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)