Query 001885
Match_columns 1000
No_of_seqs 492 out of 2292
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 03:10:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001885.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001885hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2l6l_A DNAJ homolog subfamily 99.9 5.4E-23 1.8E-27 205.7 7.6 129 65-221 9-146 (155)
2 1hdj_A Human HSP40, HDJ-1; mol 99.7 2.9E-17 9.9E-22 145.6 8.1 70 66-135 3-72 (77)
3 2ctp_A DNAJ homolog subfamily 99.7 3.6E-17 1.2E-21 145.3 7.1 71 64-134 5-75 (78)
4 2ctr_A DNAJ homolog subfamily 99.7 5E-17 1.7E-21 147.9 8.1 72 64-135 5-76 (88)
5 2dn9_A DNAJ homolog subfamily 99.7 9E-17 3.1E-21 143.0 7.3 71 64-134 5-76 (79)
6 2cug_A Mkiaa0962 protein; DNAJ 99.7 7.5E-17 2.5E-21 146.8 6.8 69 65-133 16-84 (88)
7 2ej7_A HCG3 gene; HCG3 protein 99.6 1.5E-16 5.2E-21 142.5 7.3 71 65-135 8-80 (82)
8 1wjz_A 1700030A21RIK protein; 99.6 1.4E-16 4.7E-21 146.2 6.2 69 65-133 15-90 (94)
9 2och_A Hypothetical protein DN 99.6 2.7E-16 9.4E-21 138.0 7.2 66 65-132 7-72 (73)
10 2dmx_A DNAJ homolog subfamily 99.6 2.5E-16 8.5E-21 144.3 7.2 71 65-135 8-80 (92)
11 2ctq_A DNAJ homolog subfamily 99.6 1.8E-16 6.1E-21 150.6 6.3 71 65-135 19-90 (112)
12 2yua_A Williams-beuren syndrom 99.6 3E-16 1E-20 145.9 6.9 69 65-133 16-85 (99)
13 2o37_A Protein SIS1; HSP40, J- 99.6 5.3E-16 1.8E-20 142.4 6.3 70 65-136 7-76 (92)
14 2ctw_A DNAJ homolog subfamily 99.6 6.6E-16 2.3E-20 146.1 7.0 72 64-135 15-87 (109)
15 2lgw_A DNAJ homolog subfamily 99.6 6.6E-16 2.3E-20 143.8 6.5 70 66-135 2-73 (99)
16 1bq0_A DNAJ, HSP40; chaperone, 99.6 3.3E-16 1.1E-20 146.5 4.3 71 65-135 2-73 (103)
17 2qsa_A DNAJ homolog DNJ-2; J-d 99.6 1.6E-15 5.5E-20 143.2 5.4 69 65-133 14-87 (109)
18 2ys8_A RAB-related GTP-binding 99.5 2.4E-15 8.3E-20 137.5 4.5 62 65-126 26-87 (90)
19 3apq_A DNAJ homolog subfamily 99.5 9.6E-15 3.3E-19 150.8 6.5 70 66-135 2-72 (210)
20 3ag7_A Putative uncharacterize 99.5 9.9E-15 3.4E-19 137.6 4.4 85 30-122 11-104 (106)
21 3hho_A CO-chaperone protein HS 99.4 4.5E-14 1.5E-18 144.0 5.4 68 65-132 3-78 (174)
22 1gh6_A Large T antigen; tumor 99.4 1.1E-14 3.7E-19 139.0 0.1 64 65-131 7-72 (114)
23 3lz8_A Putative chaperone DNAJ 99.4 1.2E-14 4.1E-19 161.8 0.0 69 65-133 27-95 (329)
24 1fpo_A HSC20, chaperone protei 99.4 5.7E-14 2E-18 142.9 4.7 67 66-132 1-75 (171)
25 1n4c_A Auxilin; four helix bun 99.4 1.3E-13 4.5E-18 141.1 6.1 63 65-127 116-182 (182)
26 2qwo_B Putative tyrosine-prote 99.4 1E-13 3.6E-18 127.4 4.1 71 43-120 17-91 (92)
27 2pf4_E Small T antigen; PP2A, 99.4 3.1E-14 1E-18 144.9 0.3 65 65-132 10-76 (174)
28 3bvo_A CO-chaperone protein HS 99.4 2E-13 6.9E-18 142.9 5.6 68 65-132 42-117 (207)
29 1iur_A KIAA0730 protein; DNAJ 99.4 1.2E-13 3.9E-18 126.2 2.6 60 65-124 15-76 (88)
30 1faf_A Large T antigen; J doma 99.4 1.1E-13 3.7E-18 123.8 2.3 61 65-128 10-72 (79)
31 3uo3_A J-type CO-chaperone JAC 99.3 4.2E-13 1.5E-17 137.7 3.3 66 65-132 10-82 (181)
32 2y4t_A DNAJ homolog subfamily 99.3 1.6E-11 5.3E-16 135.8 11.9 115 10-129 331-449 (450)
33 2guz_A Mitochondrial import in 99.2 1.3E-12 4.3E-17 114.5 1.9 57 65-124 13-70 (71)
34 3apo_A DNAJ homolog subfamily 99.2 1.9E-12 6.5E-17 158.1 0.6 71 65-135 20-91 (780)
35 2guz_B Mitochondrial import in 98.1 2.2E-06 7.5E-11 74.0 4.1 50 67-119 5-57 (65)
36 2pzi_A Probable serine/threoni 96.2 0.0069 2.4E-07 72.9 8.4 102 8-117 534-675 (681)
37 2jr7_A DPH3 homolog; DESR1, CS 83.1 0.49 1.7E-05 43.1 2.1 39 184-223 19-61 (89)
38 1yop_A KTI11P; zinc finger, me 82.0 0.5 1.7E-05 42.6 1.7 33 184-217 19-54 (83)
39 4gco_A Protein STI-1; structur 81.6 3.2 0.00011 38.2 7.3 48 3-50 8-55 (126)
40 4gcn_A Protein STI-1; structur 81.6 2.9 0.0001 38.4 6.9 41 5-45 5-45 (127)
41 1wge_A Hypothetical protein 26 80.6 0.72 2.4E-05 41.5 2.2 38 184-222 26-67 (83)
42 2l6j_A TPR repeat-containing p 79.6 6.2 0.00021 33.7 8.0 42 7-48 3-44 (111)
43 3upv_A Heat shock protein STI1 77.8 4.8 0.00016 35.9 6.9 45 6-50 2-46 (126)
44 4ga2_A E3 SUMO-protein ligase 74.4 4.2 0.00014 38.3 5.8 49 3-51 26-74 (150)
45 3sz7_A HSC70 cochaperone (SGT) 70.6 7.9 0.00027 36.3 6.8 46 4-49 7-52 (164)
46 4gco_A Protein STI-1; structur 70.3 8.1 0.00028 35.4 6.6 43 8-50 47-89 (126)
47 4gcn_A Protein STI-1; structur 69.0 7.8 0.00027 35.4 6.2 34 8-41 42-75 (127)
48 2xcb_A PCRH, regulatory protei 66.8 15 0.0005 33.8 7.6 48 2-49 12-59 (142)
49 1elw_A TPR1-domain of HOP; HOP 65.5 11 0.00039 31.8 6.2 40 6-45 2-41 (118)
50 2kc7_A BFR218_protein; tetratr 65.4 13 0.00046 31.3 6.6 39 11-49 3-42 (99)
51 3ma5_A Tetratricopeptide repea 65.1 7.7 0.00026 33.8 5.1 44 7-50 6-49 (100)
52 3vtx_A MAMA; tetratricopeptide 65.1 8.5 0.00029 36.4 5.8 42 7-48 4-45 (184)
53 3rkv_A Putative peptidylprolyl 64.4 12 0.0004 35.0 6.5 68 7-77 62-129 (162)
54 1na3_A Designed protein CTPR2; 64.1 18 0.0006 29.6 6.9 39 6-44 7-45 (91)
55 2hf1_A Tetraacyldisaccharide-1 63.6 2.7 9.1E-05 36.4 1.6 31 189-221 9-39 (68)
56 1na3_A Designed protein CTPR2; 63.1 17 0.00057 29.7 6.6 41 10-50 45-85 (91)
57 2js4_A UPF0434 protein BB2007; 62.9 3.1 0.0001 36.3 1.9 31 190-222 10-40 (70)
58 3gyz_A Chaperone protein IPGC; 62.6 18 0.00063 34.7 7.7 48 2-49 30-77 (151)
59 3sz7_A HSC70 cochaperone (SGT) 61.9 12 0.00041 35.1 6.1 42 8-49 45-86 (164)
60 3upv_A Heat shock protein STI1 59.8 18 0.00062 32.0 6.6 44 8-51 38-81 (126)
61 3k9i_A BH0479 protein; putativ 59.7 18 0.0006 32.0 6.5 47 5-51 24-70 (117)
62 3q49_B STIP1 homology and U bo 59.6 18 0.00061 32.1 6.6 44 6-49 7-50 (137)
63 2pk7_A Uncharacterized protein 59.5 3.1 0.00011 36.1 1.3 31 189-221 9-39 (69)
64 2jr6_A UPF0434 protein NMA0874 58.1 3.9 0.00013 35.4 1.7 32 189-222 9-40 (68)
65 1elr_A TPR2A-domain of HOP; HO 58.1 86 0.003 26.6 12.1 40 6-45 2-41 (131)
66 3rkv_A Putative peptidylprolyl 56.9 16 0.00056 34.0 6.1 32 6-37 9-40 (162)
67 1a17_A Serine/threonine protei 56.6 23 0.00078 32.2 6.9 40 6-45 11-50 (166)
68 2jny_A Uncharacterized BCR; st 56.1 4.3 0.00015 35.1 1.6 32 189-222 11-42 (67)
69 2vgx_A Chaperone SYCD; alterna 55.9 29 0.00098 32.5 7.6 46 3-48 16-61 (148)
70 2hr2_A Hypothetical protein; a 55.7 10 0.00035 37.7 4.6 36 5-40 8-43 (159)
71 2vyi_A SGTA protein; chaperone 55.6 25 0.00085 30.1 6.6 45 4-48 8-52 (131)
72 2fbn_A 70 kDa peptidylprolyl i 54.8 1.2E+02 0.0042 28.9 12.2 37 6-42 36-72 (198)
73 2dba_A Smooth muscle cell asso 53.7 24 0.00081 31.3 6.4 42 8-49 65-106 (148)
74 2fbn_A 70 kDa peptidylprolyl i 53.5 22 0.00076 34.3 6.6 38 8-45 88-125 (198)
75 2kat_A Uncharacterized protein 53.4 27 0.00092 30.4 6.6 43 7-49 18-60 (115)
76 2l6j_A TPR repeat-containing p 52.1 31 0.0011 29.1 6.6 33 9-41 39-71 (111)
77 1hxi_A PEX5, peroxisome target 52.0 23 0.0008 32.0 6.1 42 10-51 19-60 (121)
78 1elw_A TPR1-domain of HOP; HOP 51.8 30 0.001 29.0 6.4 42 8-49 38-79 (118)
79 2kck_A TPR repeat; tetratricop 51.5 32 0.0011 28.6 6.6 34 11-44 9-42 (112)
80 2xev_A YBGF; tetratricopeptide 50.8 32 0.0011 30.0 6.7 33 9-41 40-72 (129)
81 2if4_A ATFKBP42; FKBP-like, al 49.9 8.6 0.00029 41.7 3.2 39 10-48 232-270 (338)
82 2kc7_A BFR218_protein; tetratr 49.5 30 0.001 29.0 6.1 35 10-44 37-71 (99)
83 1hxi_A PEX5, peroxisome target 49.3 32 0.0011 31.0 6.6 41 9-49 52-92 (121)
84 2lni_A Stress-induced-phosphop 48.8 26 0.00088 30.4 5.7 43 7-49 15-57 (133)
85 2lni_A Stress-induced-phosphop 48.3 28 0.00097 30.1 5.9 42 8-49 50-91 (133)
86 2vyi_A SGTA protein; chaperone 46.9 40 0.0014 28.7 6.6 41 8-48 46-86 (131)
87 2dba_A Smooth muscle cell asso 46.7 34 0.0012 30.3 6.3 36 6-41 26-61 (148)
88 2vgx_A Chaperone SYCD; alterna 46.6 22 0.00076 33.3 5.2 42 8-49 55-96 (148)
89 1p5q_A FKBP52, FK506-binding p 46.5 1.6E+02 0.0053 31.5 12.5 36 6-41 145-180 (336)
90 3q49_B STIP1 homology and U bo 45.2 42 0.0014 29.6 6.6 41 9-49 44-84 (137)
91 2kpi_A Uncharacterized protein 45.1 11 0.00037 31.3 2.3 28 190-221 12-41 (56)
92 1na0_A Designed protein CTPR3; 44.0 48 0.0017 27.9 6.6 37 8-44 43-79 (125)
93 2xev_A YBGF; tetratricopeptide 43.7 47 0.0016 28.9 6.6 32 11-42 5-36 (129)
94 3uq3_A Heat shock protein STI1 43.6 2.1E+02 0.0073 27.4 12.1 35 4-38 1-35 (258)
95 2v5f_A Prolyl 4-hydroxylase su 43.4 46 0.0016 29.4 6.5 31 8-38 5-35 (104)
96 1na0_A Designed protein CTPR3; 43.4 53 0.0018 27.6 6.8 37 8-44 9-45 (125)
97 1a17_A Serine/threonine protei 43.2 50 0.0017 29.8 6.9 42 8-49 47-88 (166)
98 2v5f_A Prolyl 4-hydroxylase su 43.2 54 0.0018 28.9 6.9 43 11-53 49-91 (104)
99 1elr_A TPR2A-domain of HOP; HO 42.7 56 0.0019 27.8 6.9 44 8-52 79-122 (131)
100 2xcb_A PCRH, regulatory protei 42.4 42 0.0014 30.6 6.3 41 9-49 53-93 (142)
101 3gyz_A Chaperone protein IPGC; 42.3 36 0.0012 32.5 6.0 42 9-50 71-112 (151)
102 3qky_A Outer membrane assembly 42.1 1.1E+02 0.0037 30.6 9.9 32 10-41 150-181 (261)
103 2r5s_A Uncharacterized protein 41.5 10 0.00034 36.3 1.8 46 4-49 2-47 (176)
104 1ihg_A Cyclophilin 40; ppiase 41.5 26 0.00088 38.6 5.4 44 6-49 271-314 (370)
105 1kt0_A FKBP51, 51 kDa FK506-bi 40.4 1.9E+02 0.0063 32.5 12.4 36 6-41 266-301 (457)
106 2kck_A TPR repeat; tetratricop 39.8 31 0.0011 28.7 4.6 40 10-49 42-83 (112)
107 3k9i_A BH0479 protein; putativ 39.6 48 0.0017 29.1 6.0 41 11-51 64-104 (117)
108 1pc2_A Mitochondria fission pr 39.6 64 0.0022 31.9 7.3 45 9-53 72-116 (152)
109 3qou_A Protein YBBN; thioredox 37.3 51 0.0018 34.3 6.7 43 8-50 117-159 (287)
110 4ga2_A E3 SUMO-protein ligase 37.1 61 0.0021 30.2 6.6 41 8-48 65-105 (150)
111 3ieg_A DNAJ homolog subfamily 36.9 52 0.0018 33.6 6.6 39 11-49 275-313 (359)
112 1p5q_A FKBP52, FK506-binding p 36.4 53 0.0018 35.2 6.8 42 8-49 196-237 (336)
113 2yhc_A BAMD, UPF0169 lipoprote 36.1 1.9E+02 0.0064 28.4 10.4 31 10-40 6-36 (225)
114 2vq2_A PILW, putative fimbrial 36.0 60 0.0021 30.7 6.5 41 4-44 4-44 (225)
115 2e2e_A Formate-dependent nitri 35.7 46 0.0016 31.1 5.5 43 8-50 78-123 (177)
116 2c2l_A CHIP, carboxy terminus 35.1 56 0.0019 33.9 6.6 37 8-44 4-40 (281)
117 3ax2_A Mitochondrial import re 34.9 70 0.0024 28.0 5.9 39 10-48 19-57 (73)
118 3vtx_A MAMA; tetratricopeptide 34.5 70 0.0024 29.9 6.6 35 10-44 75-109 (184)
119 2e2e_A Formate-dependent nitri 33.8 66 0.0023 30.0 6.3 39 8-46 44-82 (177)
120 3urz_A Uncharacterized protein 33.7 83 0.0028 30.8 7.3 33 14-46 60-92 (208)
121 1hh8_A P67PHOX, NCF-2, neutrop 33.7 46 0.0016 31.9 5.2 39 8-46 37-75 (213)
122 3ieg_A DNAJ homolog subfamily 33.0 69 0.0024 32.7 6.8 40 7-46 2-41 (359)
123 1wao_1 Serine/threonine protei 32.9 2.2E+02 0.0074 32.3 11.5 31 12-42 78-108 (477)
124 3mkr_A Coatomer subunit epsilo 32.7 1.6E+02 0.0053 30.8 9.6 29 14-42 206-234 (291)
125 1pft_A TFIIB, PFTFIIBN; N-term 32.4 23 0.00078 28.2 2.3 31 190-222 7-38 (50)
126 3urz_A Uncharacterized protein 32.3 50 0.0017 32.4 5.3 38 8-45 4-41 (208)
127 1nzn_A CGI-135 protein, fissio 32.3 67 0.0023 30.8 5.9 43 11-53 77-119 (126)
128 1om2_A Protein (mitochondrial 32.1 70 0.0024 29.4 5.7 39 10-48 22-60 (95)
129 1qqe_A Vesicular transport pro 32.0 1.2E+02 0.0039 31.5 8.4 34 8-41 77-110 (292)
130 2fo7_A Synthetic consensus TPR 31.5 70 0.0024 27.0 5.6 33 11-43 4-36 (136)
131 4gyw_A UDP-N-acetylglucosamine 30.8 1.5E+02 0.0052 35.9 10.2 38 7-44 8-45 (723)
132 2k5r_A Uncharacterized protein 29.9 20 0.00068 33.1 1.7 34 189-222 9-67 (97)
133 1kt0_A FKBP51, 51 kDa FK506-bi 29.3 54 0.0018 37.0 5.6 38 8-45 317-354 (457)
134 2gw1_A Mitochondrial precursor 28.7 95 0.0032 33.8 7.3 37 5-41 3-39 (514)
135 3iqc_A FLIS, flagellar protein 28.7 64 0.0022 31.0 5.2 36 6-41 34-69 (131)
136 2pl2_A Hypothetical conserved 27.9 89 0.0031 30.7 6.4 30 9-38 119-148 (217)
137 2pl2_A Hypothetical conserved 27.5 99 0.0034 30.4 6.6 28 14-41 45-72 (217)
138 3pwf_A Rubrerythrin; non heme 27.5 40 0.0014 33.9 3.6 27 185-217 136-162 (170)
139 3o48_A Mitochondria fission 1 27.4 77 0.0026 30.8 5.4 45 11-55 81-125 (134)
140 3uq3_A Heat shock protein STI1 27.3 1.3E+02 0.0043 29.1 7.3 42 4-45 135-176 (258)
141 2cpt_A SKD1 protein, vacuolar 26.5 83 0.0028 29.7 5.4 38 1-38 8-48 (117)
142 2gw1_A Mitochondrial precursor 26.4 1.9E+02 0.0066 31.3 9.2 96 10-128 414-512 (514)
143 1y8m_A FIS1; mitochondria, unk 26.1 92 0.0032 30.6 5.8 44 11-54 80-123 (144)
144 4i17_A Hypothetical protein; T 25.9 1.2E+02 0.0042 29.3 6.9 33 12-44 46-78 (228)
145 4i17_A Hypothetical protein; T 25.9 98 0.0033 30.1 6.2 32 8-39 7-38 (228)
146 3qky_A Outer membrane assembly 25.6 97 0.0033 31.0 6.2 34 8-41 15-48 (261)
147 1hh8_A P67PHOX, NCF-2, neutrop 25.6 4.2E+02 0.014 24.8 12.2 31 5-35 3-33 (213)
148 1ihg_A Cyclophilin 40; ppiase 25.5 88 0.003 34.3 6.3 16 4-19 238-253 (370)
149 2fo7_A Synthetic consensus TPR 25.3 1.4E+02 0.0047 25.1 6.4 34 11-44 38-71 (136)
150 1zu2_A Mitochondrial import re 25.2 77 0.0026 31.4 5.1 31 22-52 105-135 (158)
151 3as5_A MAMA; tetratricopeptide 25.0 49 0.0017 30.1 3.5 35 7-41 7-41 (186)
152 1xnf_A Lipoprotein NLPI; TPR, 24.9 1.3E+02 0.0045 29.4 7.0 41 6-46 41-81 (275)
153 1vh6_A Flagellar protein FLIS; 24.8 74 0.0025 31.1 4.9 36 6-41 31-66 (145)
154 3ro3_A PINS homolog, G-protein 24.4 3.4E+02 0.012 23.4 9.1 36 6-41 7-42 (164)
155 1twf_L ABC10-alpha, DNA-direct 24.2 27 0.00094 30.3 1.5 32 185-219 25-56 (70)
156 4a1s_A PINS, partner of inscut 23.9 4.6E+02 0.016 27.4 11.5 38 5-42 45-82 (411)
157 2kat_A Uncharacterized protein 23.5 63 0.0021 28.0 3.8 33 9-41 54-86 (115)
158 4ayb_P DNA-directed RNA polyme 23.0 25 0.00085 28.4 0.8 32 189-220 4-35 (48)
159 2gmg_A Hypothetical protein PF 22.7 32 0.0011 32.2 1.6 31 186-219 65-95 (105)
160 2hr2_A Hypothetical protein; a 22.5 25 0.00085 35.0 1.0 39 4-42 94-136 (159)
161 2ifu_A Gamma-SNAP; membrane fu 22.3 2.1E+02 0.0072 29.7 8.3 33 6-38 8-46 (307)
162 3as5_A MAMA; tetratricopeptide 22.2 1.6E+02 0.0056 26.4 6.6 41 8-48 76-116 (186)
163 3fp2_A TPR repeat-containing p 22.0 69 0.0024 35.3 4.6 43 6-48 23-65 (537)
164 2ho1_A Type 4 fimbrial biogene 21.7 1.1E+02 0.0038 29.8 5.6 36 8-43 37-72 (252)
165 4gyw_A UDP-N-acetylglucosamine 21.5 2.2E+02 0.0076 34.5 9.3 35 11-45 46-80 (723)
166 2vsy_A XCC0866; transferase, g 21.5 2.9E+02 0.0098 31.4 9.8 42 7-48 56-97 (568)
167 2yhc_A BAMD, UPF0169 lipoprote 21.3 91 0.0031 30.8 4.9 33 11-43 44-76 (225)
168 3ma5_A Tetratricopeptide repea 21.3 68 0.0023 27.6 3.5 32 10-41 43-74 (100)
169 2q7f_A YRRB protein; TPR, prot 21.1 1.6E+02 0.0056 28.1 6.7 32 10-41 59-90 (243)
170 3ulq_A Response regulator aspa 21.0 2.5E+02 0.0085 29.7 8.7 35 7-41 142-176 (383)
171 2y4t_A DNAJ homolog subfamily 21.0 1.3E+02 0.0043 32.3 6.3 39 5-43 23-61 (450)
172 4fx5_A VON willebrand factor t 20.8 77 0.0026 36.5 4.8 37 4-40 378-414 (464)
173 1xnf_A Lipoprotein NLPI; TPR, 20.7 1.4E+02 0.0049 29.2 6.3 33 11-43 80-112 (275)
174 2ifu_A Gamma-SNAP; membrane fu 20.6 3.4E+02 0.012 28.1 9.4 34 7-41 115-148 (307)
175 4a5x_A MITD1, MIT domain-conta 20.4 1.1E+02 0.0038 27.2 4.7 38 1-38 9-46 (86)
No 1
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.87 E-value=5.4e-23 Score=205.75 Aligned_cols=129 Identities=25% Similarity=0.486 Sum_probs=101.0
Q ss_pred ccCcccccccCcCCCHHHHHHHHHHHHHHhCCCCCCChh-------HHHHHHHHHHHHHHcCCchhHHHHhhhcccccCC
Q 001885 65 EMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPG-------AETAFKLIGEAQRVLLDKDKRSLHDMKRKASVRR 137 (1000)
Q Consensus 65 ~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDKn~~~~-------A~~aFk~I~eAy~vLsDp~kR~~YD~~~~~~~~~ 137 (1000)
..|||+||||+++|+.++||++||+|++++||||+.... |.+.|+.|++||++|+||.+|+.||..+.....+
T Consensus 9 ~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~~~~~~ 88 (155)
T 2l6l_A 9 KKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRCEDDLR 88 (155)
T ss_dssp CSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHHHHHHH
T ss_pred CCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcchhhcc
Confidence 579999999999999999999999999999999998542 6789999999999999999999999887543311
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceecCCCCCcceEEeeeccc--ceeccCCCC
Q 001885 138 PVAPYQPPQKPTYSNVGTRNNFGSTFTGSNFQHQRPQQPAQPGINGDPTFWTMCPFCTVRYQYYRNVIN--KSIICQACN 215 (1000)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~TFWT~C~~C~~~Yey~r~~ln--~~L~C~nC~ 215 (1000)
..... . . ...+..++... ...+|||.|+ |++.|+|++..|+ ..+.|++|+
T Consensus 89 ~~~~~----~-~----------~~~~~~m~~~e------------~~~~f~~~Cr-CG~~f~i~~~~l~~~~~v~C~sCS 140 (155)
T 2l6l_A 89 NVGPV----D-A----------QVYLEEMSWNE------------GDHSFYLSCR-CGGKYSVSKDEAEEVSLISCDTCS 140 (155)
T ss_dssp TTCSS----S-E----------EEETTTSEEET------------TTTEEEEECS-SSCEEEEETTHHHHCCEEECSSSS
T ss_pred ccccc----c-c----------eeeHHHhcccc------------CCcEEEEcCC-CCCeEEecHHHhCCCCEEECCCCc
Confidence 10000 0 0 01111111000 3468999995 9999999999999 899999999
Q ss_pred CceEEE
Q 001885 216 KPFVAY 221 (1000)
Q Consensus 216 ~~FvA~ 221 (1000)
+.|.++
T Consensus 141 l~~~v~ 146 (155)
T 2l6l_A 141 LIIELL 146 (155)
T ss_dssp CEEEEE
T ss_pred eEEEEE
Confidence 998764
No 2
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.69 E-value=2.9e-17 Score=145.62 Aligned_cols=70 Identities=44% Similarity=0.660 Sum_probs=67.5
Q ss_pred cCcccccccCcCCCHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHcCCchhHHHHhhhccccc
Q 001885 66 MDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSLHDMKRKASV 135 (1000)
Q Consensus 66 ~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDKn~~~~A~~aFk~I~eAy~vLsDp~kR~~YD~~~~~~~ 135 (1000)
.|||+||||+++|+.++||++||+|++++|||+++.+++.+.|+.|++||++|+||.+|..||..+..++
T Consensus 3 ~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~ 72 (77)
T 1hdj_A 3 KDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGL 72 (77)
T ss_dssp CCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGC
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccc
Confidence 6999999999999999999999999999999999988999999999999999999999999999987766
No 3
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=3.6e-17 Score=145.31 Aligned_cols=71 Identities=41% Similarity=0.663 Sum_probs=67.4
Q ss_pred CccCcccccccCcCCCHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHcCCchhHHHHhhhcccc
Q 001885 64 NEMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSLHDMKRKAS 134 (1000)
Q Consensus 64 ~~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDKn~~~~A~~aFk~I~eAy~vLsDp~kR~~YD~~~~~~ 134 (1000)
...|||+||||+++|+.++||++||+|++++|||++..+++.+.|+.|++||++|+||.+|..||+.+...
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 5 SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 36899999999999999999999999999999999999999999999999999999999999999988654
No 4
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=5e-17 Score=147.92 Aligned_cols=72 Identities=36% Similarity=0.584 Sum_probs=69.0
Q ss_pred CccCcccccccCcCCCHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHcCCchhHHHHhhhccccc
Q 001885 64 NEMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSLHDMKRKASV 135 (1000)
Q Consensus 64 ~~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDKn~~~~A~~aFk~I~eAy~vLsDp~kR~~YD~~~~~~~ 135 (1000)
...|||+||||+++|+.++||++||+|++++|||+++.+.+++.|+.|++||++|+||.+|..||..+...+
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~ 76 (88)
T 2ctr_A 5 SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAF 76 (88)
T ss_dssp CCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHH
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccc
Confidence 368999999999999999999999999999999999988999999999999999999999999999998776
No 5
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.66 E-value=9e-17 Score=143.01 Aligned_cols=71 Identities=35% Similarity=0.508 Sum_probs=66.3
Q ss_pred CccCcccccccCcCCCHHHHHHHHHHHHHHhCCCCCC-ChhHHHHHHHHHHHHHHcCCchhHHHHhhhcccc
Q 001885 64 NEMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNK-FPGAETAFKLIGEAQRVLLDKDKRSLHDMKRKAS 134 (1000)
Q Consensus 64 ~~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDKn~-~~~A~~aFk~I~eAy~vLsDp~kR~~YD~~~~~~ 134 (1000)
...|||+||||+++|+.++||++||+|++++|||+++ .+.++++|+.|++||++|+||.+|..||..+..+
T Consensus 5 ~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 5 SSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp CCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 3689999999999999999999999999999999998 4789999999999999999999999999987644
No 6
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.66 E-value=7.5e-17 Score=146.77 Aligned_cols=69 Identities=42% Similarity=0.615 Sum_probs=66.5
Q ss_pred ccCcccccccCcCCCHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHcCCchhHHHHhhhccc
Q 001885 65 EMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSLHDMKRKA 133 (1000)
Q Consensus 65 ~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDKn~~~~A~~aFk~I~eAy~vLsDp~kR~~YD~~~~~ 133 (1000)
..|||+||||+++|+.++||++||+|++++|||+++.+.++++|+.|++||++|+||.+|..||..+..
T Consensus 16 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 84 (88)
T 2cug_A 16 DFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGSG 84 (88)
T ss_dssp SSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCC
Confidence 689999999999999999999999999999999999889999999999999999999999999998864
No 7
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.64 E-value=1.5e-16 Score=142.53 Aligned_cols=71 Identities=41% Similarity=0.590 Sum_probs=65.8
Q ss_pred ccCcccccccCcCCCHHHHHHHHHHHHHHhCCCCCCCh--hHHHHHHHHHHHHHHcCCchhHHHHhhhccccc
Q 001885 65 EMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFP--GAETAFKLIGEAQRVLLDKDKRSLHDMKRKASV 135 (1000)
Q Consensus 65 ~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDKn~~~--~A~~aFk~I~eAy~vLsDp~kR~~YD~~~~~~~ 135 (1000)
..|||+||||+++|+.++||++||+|++++|||+++.. .+++.|+.|++||++|+||.+|..||..+..++
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 80 (82)
T 2ej7_A 8 MVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPS 80 (82)
T ss_dssp SCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSC
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 68999999999999999999999999999999999853 678899999999999999999999999886544
No 8
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.64 E-value=1.4e-16 Score=146.23 Aligned_cols=69 Identities=29% Similarity=0.557 Sum_probs=64.6
Q ss_pred ccCcccccccCcCCCHHHHHHHHHHHHHHhCCCCCCC-------hhHHHHHHHHHHHHHHcCCchhHHHHhhhccc
Q 001885 65 EMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKF-------PGAETAFKLIGEAQRVLLDKDKRSLHDMKRKA 133 (1000)
Q Consensus 65 ~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDKn~~-------~~A~~aFk~I~eAy~vLsDp~kR~~YD~~~~~ 133 (1000)
..|||+||||+++|+.++||++||+|++++|||+++. ..+++.|+.|++||++|+||.+|..||..+..
T Consensus 15 ~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~ 90 (94)
T 1wjz_A 15 KKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRSG 90 (94)
T ss_dssp CSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSCC
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHccC
Confidence 6899999999999999999999999999999999874 57889999999999999999999999998753
No 9
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.63 E-value=2.7e-16 Score=138.05 Aligned_cols=66 Identities=39% Similarity=0.633 Sum_probs=61.5
Q ss_pred ccCcccccccCcCCCHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHcCCchhHHHHhhhcc
Q 001885 65 EMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSLHDMKRK 132 (1000)
Q Consensus 65 ~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDKn~~~~A~~aFk~I~eAy~vLsDp~kR~~YD~~~~ 132 (1000)
..|||+||||+++|+.++||++||+|++++|||+++. +.+.|+.|++||++|+||.+|..||+.|.
T Consensus 7 ~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~--~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 72 (73)
T 2och_A 7 ETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPD--GAEQFKQISQAYEVLSDEKKRQIYDQGGE 72 (73)
T ss_dssp CCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTT--CHHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcC--HHHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 6899999999999999999999999999999999863 46899999999999999999999999874
No 10
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=2.5e-16 Score=144.29 Aligned_cols=71 Identities=45% Similarity=0.597 Sum_probs=66.6
Q ss_pred ccCcccccccCcCCCHHHHHHHHHHHHHHhCCCCCCC--hhHHHHHHHHHHHHHHcCCchhHHHHhhhccccc
Q 001885 65 EMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKF--PGAETAFKLIGEAQRVLLDKDKRSLHDMKRKASV 135 (1000)
Q Consensus 65 ~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDKn~~--~~A~~aFk~I~eAy~vLsDp~kR~~YD~~~~~~~ 135 (1000)
..|||+||||+++|+.++||++||+|++++|||+++. ..+++.|+.|++||++|+||.+|..||+.+....
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~ 80 (92)
T 2dmx_A 8 MANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSW 80 (92)
T ss_dssp CCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSS
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccc
Confidence 6799999999999999999999999999999999975 4788999999999999999999999999987665
No 11
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=1.8e-16 Score=150.61 Aligned_cols=71 Identities=27% Similarity=0.466 Sum_probs=67.6
Q ss_pred ccCcccccccCcCCCHHHHHHHHHHHHHHhCCCCCC-ChhHHHHHHHHHHHHHHcCCchhHHHHhhhccccc
Q 001885 65 EMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNK-FPGAETAFKLIGEAQRVLLDKDKRSLHDMKRKASV 135 (1000)
Q Consensus 65 ~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDKn~-~~~A~~aFk~I~eAy~vLsDp~kR~~YD~~~~~~~ 135 (1000)
..|||+||||+++|+.++||++||+|++++||||++ .+.++++|+.|++||++|+||.+|..||+.+..++
T Consensus 19 ~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~ 90 (112)
T 2ctq_A 19 TEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQM 90 (112)
T ss_dssp CCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhcc
Confidence 589999999999999999999999999999999998 57899999999999999999999999999998765
No 12
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=3e-16 Score=145.87 Aligned_cols=69 Identities=30% Similarity=0.352 Sum_probs=64.8
Q ss_pred ccCcccccccCcCCCHHHHHHHHHHHHHHhCCCCCC-ChhHHHHHHHHHHHHHHcCCchhHHHHhhhccc
Q 001885 65 EMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNK-FPGAETAFKLIGEAQRVLLDKDKRSLHDMKRKA 133 (1000)
Q Consensus 65 ~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDKn~-~~~A~~aFk~I~eAy~vLsDp~kR~~YD~~~~~ 133 (1000)
..|||+||||+++|+.++||++||+|++++|||++. .+.+.++|+.|++||++|+|+.+|..||+.+..
T Consensus 16 ~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~ 85 (99)
T 2yua_A 16 RTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLLS 85 (99)
T ss_dssp SSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCC
T ss_pred ccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccc
Confidence 689999999999999999999999999999999996 578899999999999999999999999987643
No 13
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.60 E-value=5.3e-16 Score=142.38 Aligned_cols=70 Identities=41% Similarity=0.542 Sum_probs=65.0
Q ss_pred ccCcccccccCcCCCHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHcCCchhHHHHhhhcccccC
Q 001885 65 EMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSLHDMKRKASVR 136 (1000)
Q Consensus 65 ~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDKn~~~~A~~aFk~I~eAy~vLsDp~kR~~YD~~~~~~~~ 136 (1000)
..|||+||||+++|+.++||++||+|++++|||+++. +.+.|+.|++||++|+||.+|..||+.+...+.
T Consensus 7 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~ 76 (92)
T 2o37_A 7 ETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTG--DTEKFKEISEAFEILNDPQKREIYDQYGLEAAR 76 (92)
T ss_dssp CCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTC--CHHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHH
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--hHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhh
Confidence 5899999999999999999999999999999999863 467999999999999999999999999987763
No 14
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.60 E-value=6.6e-16 Score=146.10 Aligned_cols=72 Identities=38% Similarity=0.568 Sum_probs=67.5
Q ss_pred CccCcccccccCcCCCHHHHHHHHHHHHHHhCCCCCC-ChhHHHHHHHHHHHHHHcCCchhHHHHhhhccccc
Q 001885 64 NEMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNK-FPGAETAFKLIGEAQRVLLDKDKRSLHDMKRKASV 135 (1000)
Q Consensus 64 ~~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDKn~-~~~A~~aFk~I~eAy~vLsDp~kR~~YD~~~~~~~ 135 (1000)
...|||+||||+++|+.++||++||+|++++|||+++ .+.+.++|+.|++||++|+||.+|..||..+..+.
T Consensus 15 ~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~ 87 (109)
T 2ctw_A 15 SGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGL 87 (109)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHH
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhccccc
Confidence 3689999999999999999999999999999999997 47889999999999999999999999999887665
No 15
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.60 E-value=6.6e-16 Score=143.82 Aligned_cols=70 Identities=41% Similarity=0.575 Sum_probs=64.4
Q ss_pred cCcccccccCcCCCHHHHHHHHHHHHHHhCCCCCCC--hhHHHHHHHHHHHHHHcCCchhHHHHhhhccccc
Q 001885 66 MDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKF--PGAETAFKLIGEAQRVLLDKDKRSLHDMKRKASV 135 (1000)
Q Consensus 66 ~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDKn~~--~~A~~aFk~I~eAy~vLsDp~kR~~YD~~~~~~~ 135 (1000)
.|||+||||+++|+.++||++||+|++++|||+++. ..+++.|+.|++||++|+||.+|..||..+..+.
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~ 73 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGL 73 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC--
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccc
Confidence 589999999999999999999999999999999975 4588999999999999999999999999987766
No 16
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.59 E-value=3.3e-16 Score=146.53 Aligned_cols=71 Identities=39% Similarity=0.614 Sum_probs=66.9
Q ss_pred ccCcccccccCcCCCHHHHHHHHHHHHHHhCCCCCC-ChhHHHHHHHHHHHHHHcCCchhHHHHhhhccccc
Q 001885 65 EMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNK-FPGAETAFKLIGEAQRVLLDKDKRSLHDMKRKASV 135 (1000)
Q Consensus 65 ~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDKn~-~~~A~~aFk~I~eAy~vLsDp~kR~~YD~~~~~~~ 135 (1000)
..|||+||||+++|+.++||++||+|++++|||+++ .+.++++|+.|++||++|+||.+|..||..+...+
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~ 73 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAF 73 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSS
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhh
Confidence 469999999999999999999999999999999998 47889999999999999999999999999987766
No 17
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.56 E-value=1.6e-15 Score=143.18 Aligned_cols=69 Identities=26% Similarity=0.400 Sum_probs=65.2
Q ss_pred ccCcccccccCcCC-CHHHHHHHHHHHHHHhCCCCCCC----hhHHHHHHHHHHHHHHcCCchhHHHHhhhccc
Q 001885 65 EMDWYGLLQIEQTA-NEATIKKQYRKFALQLHPDKNKF----PGAETAFKLIGEAQRVLLDKDKRSLHDMKRKA 133 (1000)
Q Consensus 65 ~~D~Y~ILgV~~~A-~~~eIKkaYRkLal~~HPDKn~~----~~A~~aFk~I~eAy~vLsDp~kR~~YD~~~~~ 133 (1000)
..|||+||||+++| +.++||++||+|++++||||++. +.+.+.|+.|++||++|+||.+|+.||..+..
T Consensus 14 ~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~ 87 (109)
T 2qsa_A 14 LENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDH 87 (109)
T ss_dssp TSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC
T ss_pred CCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccC
Confidence 78999999999999 99999999999999999999986 67889999999999999999999999998753
No 18
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.54 E-value=2.4e-15 Score=137.55 Aligned_cols=62 Identities=37% Similarity=0.564 Sum_probs=59.4
Q ss_pred ccCcccccccCcCCCHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHcCCchhHHH
Q 001885 65 EMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSL 126 (1000)
Q Consensus 65 ~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDKn~~~~A~~aFk~I~eAy~vLsDp~kR~~ 126 (1000)
..|||+||||+++|+.++||++||+|++++||||++.+++.++|+.|++||++|+|+.+|+.
T Consensus 26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccccC
Confidence 58999999999999999999999999999999999999999999999999999999998863
No 19
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.51 E-value=9.6e-15 Score=150.76 Aligned_cols=70 Identities=37% Similarity=0.573 Sum_probs=66.5
Q ss_pred cCcccccccCcCCCHHHHHHHHHHHHHHhCCCCCC-ChhHHHHHHHHHHHHHHcCCchhHHHHhhhccccc
Q 001885 66 MDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNK-FPGAETAFKLIGEAQRVLLDKDKRSLHDMKRKASV 135 (1000)
Q Consensus 66 ~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDKn~-~~~A~~aFk~I~eAy~vLsDp~kR~~YD~~~~~~~ 135 (1000)
.|||+||||+++|+.++||++||+|++++||||++ .+.+.++|+.|++||++|+||.+|+.||+.+..+.
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~ 72 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGL 72 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTC
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhccccc
Confidence 58999999999999999999999999999999996 67899999999999999999999999999997765
No 20
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.49 E-value=9.9e-15 Score=137.61 Aligned_cols=85 Identities=21% Similarity=0.272 Sum_probs=69.8
Q ss_pred HHHHHHhhcCChH-HHHHHHHHhhhhhhhcccccCCccCcccccccCcCCCHHHHHHHHHHHHHHhCCCCCCCh------
Q 001885 30 FALKAQHLYQDLE-NISQMIMVCDVHCSAENKLFGNEMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFP------ 102 (1000)
Q Consensus 30 ~a~KA~~L~P~le-~i~q~L~~~dv~~aa~~k~~g~~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDKn~~~------ 102 (1000)
+-.+.++..+..+ +|.+||..++..+. . ..|||.|||++. |+.++||+|||+|++++||||++.+
T Consensus 11 ~~~~i~~W~~~~~~~ir~lL~~l~~~l~------~-~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~ 82 (106)
T 3ag7_A 11 IDAKIRKWSSGKSGNIRSLLSTLQYILW------S-GSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQ 82 (106)
T ss_dssp HHHHHHHHHTTTTTCHHHHHTTGGGTSC------T-TSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHH
T ss_pred HHHHHHHHhcccHHHHHHHHHHHHHHhc------c-cCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhh
Confidence 3456666677665 48999988775322 2 579999999996 9999999999999999999998742
Q ss_pred --hHHHHHHHHHHHHHHcCCch
Q 001885 103 --GAETAFKLIGEAQRVLLDKD 122 (1000)
Q Consensus 103 --~A~~aFk~I~eAy~vLsDp~ 122 (1000)
.|+++|+.|++||++|+|+.
T Consensus 83 ~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 83 KYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHHHcCcc
Confidence 36889999999999999985
No 21
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.44 E-value=4.5e-14 Score=144.05 Aligned_cols=68 Identities=19% Similarity=0.292 Sum_probs=62.2
Q ss_pred ccCcccccccCcCCC--HHHHHHHHHHHHHHhCCCCCCChh------HHHHHHHHHHHHHHcCCchhHHHHhhhcc
Q 001885 65 EMDWYGLLQIEQTAN--EATIKKQYRKFALQLHPDKNKFPG------AETAFKLIGEAQRVLLDKDKRSLHDMKRK 132 (1000)
Q Consensus 65 ~~D~Y~ILgV~~~A~--~~eIKkaYRkLal~~HPDKn~~~~------A~~aFk~I~eAy~vLsDp~kR~~YD~~~~ 132 (1000)
..|||+||||+++++ ..+||++||+|++++||||++... +...|+.|++||++|+||.+|+.||..+.
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 78 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSLQ 78 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHT
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHcc
Confidence 579999999999987 999999999999999999987543 67899999999999999999999998875
No 22
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.43 E-value=1.1e-14 Score=139.03 Aligned_cols=64 Identities=23% Similarity=0.261 Sum_probs=59.7
Q ss_pred ccCcccccccCcCCCH--HHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHcCCchhHHHHhhhc
Q 001885 65 EMDWYGLLQIEQTANE--ATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSLHDMKR 131 (1000)
Q Consensus 65 ~~D~Y~ILgV~~~A~~--~eIKkaYRkLal~~HPDKn~~~~A~~aFk~I~eAy~vLsDp~kR~~YD~~~ 131 (1000)
..|+|+||||++.|+. ++||++||+|++++||||++. +++|+.|++||++|+||.+|+.||.++
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~---~e~f~~I~~AYevL~d~~~R~~~~~~~ 72 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFG 72 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT---TTTTHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc---HHHHHHHHHHHHHHCCHHHHHHhhhcc
Confidence 4799999999999998 999999999999999999865 579999999999999999999999765
No 23
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.43 E-value=1.2e-14 Score=161.82 Aligned_cols=69 Identities=36% Similarity=0.507 Sum_probs=0.0
Q ss_pred ccCcccccccCcCCCHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHcCCchhHHHHhhhccc
Q 001885 65 EMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSLHDMKRKA 133 (1000)
Q Consensus 65 ~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDKn~~~~A~~aFk~I~eAy~vLsDp~kR~~YD~~~~~ 133 (1000)
..|||+||||+++|+.++||+|||+||+++|||+++.+.|+++|+.|++||++|+||.+|+.||+++..
T Consensus 27 ~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 95 (329)
T 3lz8_A 27 LKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQH 95 (329)
T ss_dssp ---------------------------------------------------------------------
T ss_pred ccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhcc
Confidence 479999999999999999999999999999999999889999999999999999999999999998543
No 24
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.42 E-value=5.7e-14 Score=142.93 Aligned_cols=67 Identities=19% Similarity=0.238 Sum_probs=61.5
Q ss_pred cCcccccccCcCC--CHHHHHHHHHHHHHHhCCCCCCChh------HHHHHHHHHHHHHHcCCchhHHHHhhhcc
Q 001885 66 MDWYGLLQIEQTA--NEATIKKQYRKFALQLHPDKNKFPG------AETAFKLIGEAQRVLLDKDKRSLHDMKRK 132 (1000)
Q Consensus 66 ~D~Y~ILgV~~~A--~~~eIKkaYRkLal~~HPDKn~~~~------A~~aFk~I~eAy~vLsDp~kR~~YD~~~~ 132 (1000)
+|||+||||++++ +..+||++||+|++++||||++... |.+.|+.|++||++|+||.+|+.||..+.
T Consensus 1 ~d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 75 (171)
T 1fpo_A 1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH 75 (171)
T ss_dssp CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc
Confidence 4899999999999 9999999999999999999997532 45789999999999999999999998865
No 25
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.41 E-value=1.3e-13 Score=141.13 Aligned_cols=63 Identities=22% Similarity=0.295 Sum_probs=58.9
Q ss_pred ccCcccccccCcCCCHHHHHHHHHHHHHHhCCCCCCChh----HHHHHHHHHHHHHHcCCchhHHHH
Q 001885 65 EMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFPG----AETAFKLIGEAQRVLLDKDKRSLH 127 (1000)
Q Consensus 65 ~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDKn~~~~----A~~aFk~I~eAy~vLsDp~kR~~Y 127 (1000)
..|||+||||++.|+.++||++||+|++++||||++... |++.|+.|++||++|+|+.+|+.|
T Consensus 116 ~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 116 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp TCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 369999999999999999999999999999999997543 789999999999999999999877
No 26
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.40 E-value=1e-13 Score=127.38 Aligned_cols=71 Identities=20% Similarity=0.195 Sum_probs=59.8
Q ss_pred HHHHHHHHhhhhhhhcccccCCccCcccccccCcCCCHHHHHHHHHHHHHHhCCCCCCCh----hHHHHHHHHHHHHHHc
Q 001885 43 NISQMIMVCDVHCSAENKLFGNEMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKFP----GAETAFKLIGEAQRVL 118 (1000)
Q Consensus 43 ~i~q~L~~~dv~~aa~~k~~g~~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDKn~~~----~A~~aFk~I~eAy~vL 118 (1000)
+|+.||+.++..+- ...++|.+|||++.|+.++||+|||+|++++||||++.. .|+++|+.|++||++|
T Consensus 17 ~ir~lL~~l~~~L~-------~~~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL 89 (92)
T 2qwo_B 17 NIRALLSTMHTVLW-------AGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEF 89 (92)
T ss_dssp CHHHHHHHGGGTSC-------TTCCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-------ccccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHH
Confidence 47778877765322 125899999999999999999999999999999999753 3789999999999999
Q ss_pred CC
Q 001885 119 LD 120 (1000)
Q Consensus 119 sD 120 (1000)
.+
T Consensus 90 ~~ 91 (92)
T 2qwo_B 90 EN 91 (92)
T ss_dssp HH
T ss_pred Hh
Confidence 64
No 27
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.39 E-value=3.1e-14 Score=144.94 Aligned_cols=65 Identities=23% Similarity=0.242 Sum_probs=58.1
Q ss_pred ccCcccccccCcCCC--HHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHcCCchhHHHHhhhcc
Q 001885 65 EMDWYGLLQIEQTAN--EATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSLHDMKRK 132 (1000)
Q Consensus 65 ~~D~Y~ILgV~~~A~--~~eIKkaYRkLal~~HPDKn~~~~A~~aFk~I~eAy~vLsDp~kR~~YD~~~~ 132 (1000)
..|+|+||||+++|+ .++||+|||+||+++||||++. +++|+.|++||++|+||.+|+.||+.+.
T Consensus 10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~---~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C---CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC---HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 479999999999998 6999999999999999999865 4789999999999999999999999885
No 28
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.38 E-value=2e-13 Score=142.86 Aligned_cols=68 Identities=22% Similarity=0.361 Sum_probs=61.2
Q ss_pred ccCcccccccCcC--CCHHHHHHHHHHHHHHhCCCCCCCh------hHHHHHHHHHHHHHHcCCchhHHHHhhhcc
Q 001885 65 EMDWYGLLQIEQT--ANEATIKKQYRKFALQLHPDKNKFP------GAETAFKLIGEAQRVLLDKDKRSLHDMKRK 132 (1000)
Q Consensus 65 ~~D~Y~ILgV~~~--A~~~eIKkaYRkLal~~HPDKn~~~------~A~~aFk~I~eAy~vLsDp~kR~~YD~~~~ 132 (1000)
..|||+||||++. ++..+||++||+|++++||||++.. .|.+.|+.|++||+||+||.+|+.||..+.
T Consensus 42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~l~ 117 (207)
T 3bvo_A 42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLKLH 117 (207)
T ss_dssp TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHT
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhc
Confidence 6899999999986 7899999999999999999999753 256789999999999999999999998654
No 29
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.37 E-value=1.2e-13 Score=126.19 Aligned_cols=60 Identities=23% Similarity=0.195 Sum_probs=55.8
Q ss_pred ccCcccccccCcCCCHHHHHHHHHHHHHHhCCCCCCC--hhHHHHHHHHHHHHHHcCCchhH
Q 001885 65 EMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNKF--PGAETAFKLIGEAQRVLLDKDKR 124 (1000)
Q Consensus 65 ~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDKn~~--~~A~~aFk~I~eAy~vLsDp~kR 124 (1000)
..|+|+||||.++|+.++||++||+|++++||||++. ..++++|+.|++||++|+|...|
T Consensus 15 ~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 15 LKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp HHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccc
Confidence 5789999999999999999999999999999999986 45899999999999999998666
No 30
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.37 E-value=1.1e-13 Score=123.82 Aligned_cols=61 Identities=15% Similarity=0.250 Sum_probs=56.0
Q ss_pred ccCcccccccCcC--CCHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHcCCchhHHHHh
Q 001885 65 EMDWYGLLQIEQT--ANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSLHD 128 (1000)
Q Consensus 65 ~~D~Y~ILgV~~~--A~~~eIKkaYRkLal~~HPDKn~~~~A~~aFk~I~eAy~vLsDp~kR~~YD 128 (1000)
..++|+||||+++ ++.++||++||+|++++||||+. +.++|+.|++||++|+|+.+|..++
T Consensus 10 ~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~---~~~~f~~i~~AYe~L~~~~~r~~~~ 72 (79)
T 1faf_A 10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGG---SHALMQELNSLWGTFKTEVYNLRMN 72 (79)
T ss_dssp HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSC---CHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC---CHHHHHHHHHHHHHHhhHHHHHHHh
Confidence 4689999999999 99999999999999999999974 4689999999999999999998743
No 31
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.32 E-value=4.2e-13 Score=137.70 Aligned_cols=66 Identities=24% Similarity=0.374 Sum_probs=60.8
Q ss_pred ccCccccc------ccCc-CCCHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHcCCchhHHHHhhhcc
Q 001885 65 EMDWYGLL------QIEQ-TANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSLHDMKRK 132 (1000)
Q Consensus 65 ~~D~Y~IL------gV~~-~A~~~eIKkaYRkLal~~HPDKn~~~~A~~aFk~I~eAy~vLsDp~kR~~YD~~~~ 132 (1000)
..|||+|| |+++ +|+..+||++||+|++++||||++. +.+.|+.|++||++|+||.+|+.||..+.
T Consensus 10 ~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~--a~~~f~~i~~AY~vL~dp~~R~~Yd~~l~ 82 (181)
T 3uo3_A 10 TSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ--GSEQSSTLNQAYHTLKDPLRRSQYMLKLL 82 (181)
T ss_dssp SCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS--CSSGGGSHHHHHHHHHSHHHHHHHHHHHH
T ss_pred CCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc--HHHHHHHHHHHHHHHcChHHHHHHHHHHH
Confidence 58999999 4665 8999999999999999999999976 78899999999999999999999999873
No 32
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.26 E-value=1.6e-11 Score=135.76 Aligned_cols=115 Identities=28% Similarity=0.313 Sum_probs=87.6
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHHHhhhhhhhcccccCCccCcccccccCcCCCHHHHHHHHHH
Q 001885 10 RVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIMVCDVHCSAENKLFGNEMDWYGLLQIEQTANEATIKKQYRK 89 (1000)
Q Consensus 10 ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~~~dv~~aa~~k~~g~~~D~Y~ILgV~~~A~~~eIKkaYRk 89 (1000)
-+..+|..++..|+++.|+..+.++.++.|....+...|..+...... . ...++|.+||+.+.++.++|+++|++
T Consensus 331 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~----~-~~~~~y~~lg~~~~~~~~~~~~~y~~ 405 (450)
T 2y4t_A 331 ALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLEKAQRLLKQ----S-QKRDYYKILGVKRNAKKQEIIKAYRK 405 (450)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHH----H-HSCCSGGGSCSSTTCCTTHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHhhc----c-cchhHHHHhCCCccCCHHHHHHHHHH
Confidence 344556667777778888888888877777776665555544332221 1 15699999999999999999999999
Q ss_pred HHHHhCCCCCCChh----HHHHHHHHHHHHHHcCCchhHHHHhh
Q 001885 90 FALQLHPDKNKFPG----AETAFKLIGEAQRVLLDKDKRSLHDM 129 (1000)
Q Consensus 90 Lal~~HPDKn~~~~----A~~aFk~I~eAy~vLsDp~kR~~YD~ 129 (1000)
+++.+|||+.+.+. ++..|+.|.+||++|+|+.+|..||+
T Consensus 406 ~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 406 LALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp HHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred HHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 99999999998654 88999999999999999999999996
No 33
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.24 E-value=1.3e-12 Score=114.50 Aligned_cols=57 Identities=26% Similarity=0.348 Sum_probs=51.7
Q ss_pred ccCcccccccCc-CCCHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHcCCchhH
Q 001885 65 EMDWYGLLQIEQ-TANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKR 124 (1000)
Q Consensus 65 ~~D~Y~ILgV~~-~A~~~eIKkaYRkLal~~HPDKn~~~~A~~aFk~I~eAy~vLsDp~kR 124 (1000)
..++|+||||++ +|+.++||++||+|++++|||++ ++.+.|+.|++||++|+|+..|
T Consensus 13 ~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~---g~~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 13 SKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKG---GSPFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp HHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGT---CCHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCC---CCHHHHHHHHHHHHHHhhhhhc
Confidence 468999999999 79999999999999999999996 4567999999999999987655
No 34
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.19 E-value=1.9e-12 Score=158.07 Aligned_cols=71 Identities=37% Similarity=0.578 Sum_probs=40.9
Q ss_pred ccCcccccccCcCCCHHHHHHHHHHHHHHhCCCCCC-ChhHHHHHHHHHHHHHHcCCchhHHHHhhhccccc
Q 001885 65 EMDWYGLLQIEQTANEATIKKQYRKFALQLHPDKNK-FPGAETAFKLIGEAQRVLLDKDKRSLHDMKRKASV 135 (1000)
Q Consensus 65 ~~D~Y~ILgV~~~A~~~eIKkaYRkLal~~HPDKn~-~~~A~~aFk~I~eAy~vLsDp~kR~~YD~~~~~~~ 135 (1000)
..|||+||||+++|+.++||+|||+|++++||||++ .+.++++|+.|++||++|+||.+|+.||+.+..+.
T Consensus 20 ~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~ 91 (780)
T 3apo_A 20 DQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGL 91 (780)
T ss_dssp ---CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC-----
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhccccc
Confidence 689999999999999999999999999999999996 57889999999999999999999999999998766
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.07 E-value=2.2e-06 Score=73.96 Aligned_cols=50 Identities=18% Similarity=0.159 Sum_probs=44.5
Q ss_pred CcccccccCcC---CCHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHcC
Q 001885 67 DWYGLLQIEQT---ANEATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRVLL 119 (1000)
Q Consensus 67 D~Y~ILgV~~~---A~~~eIKkaYRkLal~~HPDKn~~~~A~~aFk~I~eAy~vLs 119 (1000)
+-|.||||++. ++.++|+++||+|....||||. |.......|++|+++|.
T Consensus 5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkG---GS~yl~~ki~~Ake~l~ 57 (65)
T 2guz_B 5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKG---GSFYLQSKVYRAAERLK 57 (65)
T ss_dssp HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGT---CCHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCC---CCHHHHHHHHHHHHHHH
Confidence 34889999999 9999999999999999999996 55666788999999985
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=96.22 E-value=0.0069 Score=72.89 Aligned_cols=102 Identities=15% Similarity=0.074 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHHHhh-----------------------------------
Q 001885 8 AIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIMVCD----------------------------------- 52 (1000)
Q Consensus 8 A~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~~~d----------------------------------- 52 (1000)
+.-+..+|..++..|++++|+..+.+|.++.|....+...+..+-
T Consensus 534 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~l~~~~~~~~~~~~l~ 613 (681)
T 2pzi_A 534 ISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHFTTARLTSAVTLLSGRSTSEVTEEQIRDAARRVEALPPTEPRVLQIR 613 (681)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTHHHHHHHHHHHTC-------CCHHHHHHHHHHHHTSCTTSTTHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHhhcccCcccHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHhhCCCCcHHHHHHH
Confidence 345678899999999999999999999999998643221111110
Q ss_pred --hhhhhc-ccccCCccCcccccccCcCCCH--HHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHH
Q 001885 53 --VHCSAE-NKLFGNEMDWYGLLQIEQTANE--ATIKKQYRKFALQLHPDKNKFPGAETAFKLIGEAQRV 117 (1000)
Q Consensus 53 --v~~aa~-~k~~g~~~D~Y~ILgV~~~A~~--~eIKkaYRkLal~~HPDKn~~~~A~~aFk~I~eAy~v 117 (1000)
+..++. ....+ ..|||.|||++.++.. .+|+++||+||++.+++ .+++.+|..|+.|
T Consensus 614 ~~ll~~~l~~~~~~-~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~-------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 614 ALVLGGALDWLKDN-KASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ-------RHRYTLVDMANKV 675 (681)
T ss_dssp HHHHHHHHHHHTSC-CCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH-------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcc-CCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh-------HHHHHHHHHhccc
Confidence 000001 12233 6789999999776655 67999999999966554 4789999999876
No 37
>2jr7_A DPH3 homolog; DESR1, CSL zinc finger, metal binding protein; NMR {Homo sapiens}
Probab=83.14 E-value=0.49 Score=43.13 Aligned_cols=39 Identities=18% Similarity=0.515 Sum_probs=31.1
Q ss_pred CCcceecCCCCCcceEEeeeccc---ceeccCCCCCc-eEEEec
Q 001885 184 DPTFWTMCPFCTVRYQYYRNVIN---KSIICQACNKP-FVAYER 223 (1000)
Q Consensus 184 ~~TFWT~C~~C~~~Yey~r~~ln---~~L~C~nC~~~-FvA~e~ 223 (1000)
..+|...| ||+..|++.+..|. ..+.|++|+.. -|-++.
T Consensus 19 ~~~y~ypC-rCGd~F~IteedLe~ge~iv~C~sCSL~IkV~y~~ 61 (89)
T 2jr7_A 19 SETYFYPC-PCGDNFSITKEDLENGEDVATCPSCSLIIKVIYDK 61 (89)
T ss_dssp TTEEEEEC-TTSSEEEEEHHHHHHTCCEEECTTTCCEEEEECCH
T ss_pred CCEEEEcC-CCCCEEEECHHHHhCCCEEEECCCCccEEEEEEcc
Confidence 35788889 59999999998876 57999999997 555543
No 38
>1yop_A KTI11P; zinc finger, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.17.1 PDB: 1yws_A
Probab=82.01 E-value=0.5 Score=42.58 Aligned_cols=33 Identities=27% Similarity=0.573 Sum_probs=28.0
Q ss_pred CCcceecCCCCCcceEEeeeccc---ceeccCCCCCc
Q 001885 184 DPTFWTMCPFCTVRYQYYRNVIN---KSIICQACNKP 217 (1000)
Q Consensus 184 ~~TFWT~C~~C~~~Yey~r~~ln---~~L~C~nC~~~ 217 (1000)
..+|...| ||+..|++.+..|. ..+.|++|+..
T Consensus 19 ~~~y~ypC-rCGd~F~it~edL~~ge~iv~C~sCSL~ 54 (83)
T 1yop_A 19 NQMFTYPC-PCGDRFQIYLDDMFEGEKVAVCPSCSLM 54 (83)
T ss_dssp TTEEEEEE-TTTEEEEEEHHHHHTTCCEEECSSSCCE
T ss_pred CCEEEEeC-CCCCeEEECHHHHhCCCEEEECCCCccE
Confidence 35788888 69999999998876 58999999986
No 39
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=81.65 E-value=3.2 Score=38.20 Aligned_cols=48 Identities=13% Similarity=0.023 Sum_probs=40.8
Q ss_pred CCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHHH
Q 001885 3 CNKDEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIMV 50 (1000)
Q Consensus 3 ~NkeEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~~ 50 (1000)
-|-+.|+..++++..+++.|+|..|+..+.+|.++.|....+...+..
T Consensus 8 inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~ 55 (126)
T 4gco_A 8 INPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAA 55 (126)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhh
Confidence 467889999999999999999999999999999999987655444443
No 40
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=81.60 E-value=2.9 Score=38.39 Aligned_cols=41 Identities=24% Similarity=0.199 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHH
Q 001885 5 KDEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENIS 45 (1000)
Q Consensus 5 keEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~ 45 (1000)
.|.|...++++..++..|+|+.|+.++.+|..++|....+-
T Consensus 5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~ 45 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFY 45 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 47789999999999999999999999999999999875443
No 41
>1wge_A Hypothetical protein 2610018L09RIK; diphthamide,CSL zinc finger, ADP-ribosylating toxin, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.17.1
Probab=80.60 E-value=0.72 Score=41.55 Aligned_cols=38 Identities=18% Similarity=0.502 Sum_probs=30.3
Q ss_pred CCcceecCCCCCcceEEeeeccc---ceeccCCCCCc-eEEEe
Q 001885 184 DPTFWTMCPFCTVRYQYYRNVIN---KSIICQACNKP-FVAYE 222 (1000)
Q Consensus 184 ~~TFWT~C~~C~~~Yey~r~~ln---~~L~C~nC~~~-FvA~e 222 (1000)
..+|...| ||+..|++.+..|. ..+.|++|+.. -|-++
T Consensus 26 ~~~y~y~C-rCGd~F~it~edL~~ge~iv~C~sCSL~I~V~~~ 67 (83)
T 1wge_A 26 SETYFYPC-PCGDNFAITKEDLENGEDVATCPSCSLIIKVIYD 67 (83)
T ss_dssp TTEEEECC-SSSSCEEEEHHHHHTTCCEEECTTTCCEEEEECC
T ss_pred CCEEEEeC-CCCCEEEECHHHHhCCCEEEECCCCceEEEEEec
Confidence 35788888 69999999998876 57999999997 44444
No 42
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=79.57 E-value=6.2 Score=33.71 Aligned_cols=42 Identities=7% Similarity=-0.179 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHH
Q 001885 7 EAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMI 48 (1000)
Q Consensus 7 EA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L 48 (1000)
.+..+..+|..++..|+|+.|+..+.+|.++.|....+...+
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 44 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNK 44 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 567788899999999999999999999999999875443333
No 43
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=77.79 E-value=4.8 Score=35.89 Aligned_cols=45 Identities=9% Similarity=-0.105 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHHH
Q 001885 6 DEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIMV 50 (1000)
Q Consensus 6 eEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~~ 50 (1000)
+.|..+..+|..++..|+|..|+..+.+|.++.|....+...+..
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~ 46 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAA 46 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 467889999999999999999999999999999987554444443
No 44
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=74.40 E-value=4.2 Score=38.34 Aligned_cols=49 Identities=8% Similarity=0.110 Sum_probs=40.1
Q ss_pred CCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHHHh
Q 001885 3 CNKDEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIMVC 51 (1000)
Q Consensus 3 ~NkeEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~~~ 51 (1000)
.+.+.+.....+|..++..|+|+.|+.++.+|.++.|....+...+..+
T Consensus 26 ~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~ 74 (150)
T 4ga2_A 26 SPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLL 74 (150)
T ss_dssp SHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3456677778899999999999999999999999999986655555443
No 45
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=70.59 E-value=7.9 Score=36.35 Aligned_cols=46 Identities=11% Similarity=0.049 Sum_probs=39.1
Q ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHH
Q 001885 4 NKDEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIM 49 (1000)
Q Consensus 4 NkeEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~ 49 (1000)
+.+.|..+..+|..++..|+|+.|+.++.+|.+++|....+...+.
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 52 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRA 52 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHH
Confidence 4577889999999999999999999999999999998755444443
No 46
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=70.27 E-value=8.1 Score=35.43 Aligned_cols=43 Identities=14% Similarity=-0.090 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHHH
Q 001885 8 AIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIMV 50 (1000)
Q Consensus 8 A~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~~ 50 (1000)
+.-...+|..++..|++..|+..+.+|.++.|....+--.+..
T Consensus 47 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~ 89 (126)
T 4gco_A 47 AILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAA 89 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHH
Confidence 4556778899999999999999999999999987554444443
No 47
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=69.01 E-value=7.8 Score=35.44 Aligned_cols=34 Identities=18% Similarity=0.159 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCh
Q 001885 8 AIRVKGIAESKMQSNDFAGARKFALKAQHLYQDL 41 (1000)
Q Consensus 8 A~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~l 41 (1000)
+.-...+|..++..|+|+.|+.++.+|..+.|..
T Consensus 42 ~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~ 75 (127)
T 4gcn_A 42 ITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRET 75 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCccc
Confidence 3445678999999999999999999999999865
No 48
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=66.80 E-value=15 Score=33.81 Aligned_cols=48 Identities=10% Similarity=-0.009 Sum_probs=39.6
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHH
Q 001885 2 DCNKDEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIM 49 (1000)
Q Consensus 2 e~NkeEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~ 49 (1000)
+.+-+.+.....+|..++..|+|+.|+.++.++..+.|....+-..+.
T Consensus 12 ~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 59 (142)
T 2xcb_A 12 GLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLG 59 (142)
T ss_dssp TCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHH
Confidence 345667788889999999999999999999999999998765544443
No 49
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=65.47 E-value=11 Score=31.75 Aligned_cols=40 Identities=10% Similarity=0.062 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHH
Q 001885 6 DEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENIS 45 (1000)
Q Consensus 6 eEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~ 45 (1000)
+.+..+..+|..++..|+++.|..++.++..+.|....+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 41 (118)
T 1elw_A 2 EQVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLY 41 (118)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred chHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHH
Confidence 3577788899999999999999999999999999764443
No 50
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=65.43 E-value=13 Score=31.34 Aligned_cols=39 Identities=5% Similarity=-0.114 Sum_probs=31.9
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHH-HHHHHH
Q 001885 11 VKGIAESKMQSNDFAGARKFALKAQHLYQDLEN-ISQMIM 49 (1000)
Q Consensus 11 a~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~-i~q~L~ 49 (1000)
.+.+|..++..|++..|+..+.++.++.|.... +...+.
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg 42 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMG 42 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHH
Confidence 357889999999999999999999999998754 433333
No 51
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=65.14 E-value=7.7 Score=33.81 Aligned_cols=44 Identities=7% Similarity=0.009 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHHH
Q 001885 7 EAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIMV 50 (1000)
Q Consensus 7 EA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~~ 50 (1000)
.+.-...+|..++..|+++.|+..+.+|.++.|....+-..+..
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~ 49 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGK 49 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 45667788999999999999999999999999987554444443
No 52
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=65.08 E-value=8.5 Score=36.42 Aligned_cols=42 Identities=17% Similarity=0.097 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHH
Q 001885 7 EAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMI 48 (1000)
Q Consensus 7 EA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L 48 (1000)
.+.-...++..+++.|||++|+..+.+|.+++|....+...+
T Consensus 4 ~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 45 (184)
T 3vtx_A 4 TTTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKL 45 (184)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 355677899999999999999999999999999875443333
No 53
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=64.35 E-value=12 Score=35.05 Aligned_cols=68 Identities=10% Similarity=-0.039 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHHHhhhhhhhcccccCCccCcccccccCcC
Q 001885 7 EAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIMVCDVHCSAENKLFGNEMDWYGLLQIEQT 77 (1000)
Q Consensus 7 EA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~~~dv~~aa~~k~~g~~~D~Y~ILgV~~~ 77 (1000)
.+.-...+|..++..|+|..|+.++.+|.++.|....+.-.+..+-.... .. .....+|-.+|.+.|.
T Consensus 62 ~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~g--~~-~~A~~~~~~al~l~p~ 129 (162)
T 3rkv_A 62 NIPLYANMSQCYLNIGDLHEAEETSSEVLKREETNEKALFRRAKARIAAW--KL-DEAEEDLKLLLRNHPA 129 (162)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTT--CH-HHHHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHh--cH-HHHHHHHHHHHhcCCC
Confidence 35667788999999999999999999999999987554443433322211 11 0113455556777665
No 54
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=64.13 E-value=18 Score=29.57 Aligned_cols=39 Identities=15% Similarity=0.158 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHH
Q 001885 6 DEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENI 44 (1000)
Q Consensus 6 eEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i 44 (1000)
..+.-+..+|..++..++++.|+.++.+|..+.|....+
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 45 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEA 45 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHH
Confidence 346677889999999999999999999999999987543
No 55
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=63.61 E-value=2.7 Score=36.43 Aligned_cols=31 Identities=19% Similarity=0.566 Sum_probs=25.0
Q ss_pred ecCCCCCcceEEeeecccceeccCCCCCceEEE
Q 001885 189 TMCPFCTVRYQYYRNVINKSIICQACNKPFVAY 221 (1000)
Q Consensus 189 T~C~~C~~~Yey~r~~ln~~L~C~nC~~~FvA~ 221 (1000)
-+||.|++..+|.+. ...|.|++|+..|--.
T Consensus 9 L~CP~ck~~L~~~~~--~~~LiC~~cg~~YPI~ 39 (68)
T 2hf1_A 9 LVCPLCKGPLVFDKS--KDELICKGDRLAFPIK 39 (68)
T ss_dssp CBCTTTCCBCEEETT--TTEEEETTTTEEEEEE
T ss_pred eECCCCCCcCeEeCC--CCEEEcCCCCcEecCC
Confidence 379999999998764 6789999999776543
No 56
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=63.06 E-value=17 Score=29.71 Aligned_cols=41 Identities=15% Similarity=0.114 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHHH
Q 001885 10 RVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIMV 50 (1000)
Q Consensus 10 ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~~ 50 (1000)
-...+|..++..|+++.|+.++.++.++.|....+...+..
T Consensus 45 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~ 85 (91)
T 1na3_A 45 AWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGN 85 (91)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 35567888999999999999999999999987655544443
No 57
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=62.92 E-value=3.1 Score=36.26 Aligned_cols=31 Identities=26% Similarity=0.708 Sum_probs=25.0
Q ss_pred cCCCCCcceEEeeecccceeccCCCCCceEEEe
Q 001885 190 MCPFCTVRYQYYRNVINKSIICQACNKPFVAYE 222 (1000)
Q Consensus 190 ~C~~C~~~Yey~r~~ln~~L~C~nC~~~FvA~e 222 (1000)
+||.|+...+|... ...|.|++|+..|--.+
T Consensus 10 ~CP~ck~~L~~~~~--~~~LiC~~cg~~YPI~d 40 (70)
T 2js4_A 10 VCPVCKGRLEFQRA--QAELVCNADRLAFPVRD 40 (70)
T ss_dssp BCTTTCCBEEEETT--TTEEEETTTTEEEEEET
T ss_pred ECCCCCCcCEEeCC--CCEEEcCCCCceecCCC
Confidence 79999999998764 57899999997765443
No 58
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=62.55 E-value=18 Score=34.66 Aligned_cols=48 Identities=8% Similarity=-0.182 Sum_probs=40.2
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHH
Q 001885 2 DCNKDEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIM 49 (1000)
Q Consensus 2 e~NkeEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~ 49 (1000)
+.+-+.+..+..+|..++..|+++.|+.++.+|..+.|....+-..|.
T Consensus 30 ~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg 77 (151)
T 3gyz_A 30 AIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLA 77 (151)
T ss_dssp CSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 346677888899999999999999999999999999998765544444
No 59
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=61.90 E-value=12 Score=35.07 Aligned_cols=42 Identities=14% Similarity=-0.038 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHH
Q 001885 8 AIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIM 49 (1000)
Q Consensus 8 A~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~ 49 (1000)
+.-+..+|..++..|+++.|+.++.+|.++.|....+...+.
T Consensus 45 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 86 (164)
T 3sz7_A 45 PIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLG 86 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 334567788999999999999999999999998754433333
No 60
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=59.76 E-value=18 Score=31.98 Aligned_cols=44 Identities=14% Similarity=-0.099 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHHHh
Q 001885 8 AIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIMVC 51 (1000)
Q Consensus 8 A~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~~~ 51 (1000)
+.-...+|..++..|+++.|+..+.+|.++.|....+...+..+
T Consensus 38 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 81 (126)
T 3upv_A 38 ARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATA 81 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 45667789999999999999999999999999876655444433
No 61
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=59.74 E-value=18 Score=32.03 Aligned_cols=47 Identities=11% Similarity=0.135 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHHHh
Q 001885 5 KDEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIMVC 51 (1000)
Q Consensus 5 keEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~~~ 51 (1000)
.+.+.-...+|..++..|+++.|+..+.+|.+++|....+.-.+..+
T Consensus 24 p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 70 (117)
T 3k9i_A 24 KDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMV 70 (117)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHH
Confidence 44566678889999999999999999999999999986555444433
No 62
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=59.59 E-value=18 Score=32.10 Aligned_cols=44 Identities=9% Similarity=-0.084 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHH
Q 001885 6 DEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIM 49 (1000)
Q Consensus 6 eEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~ 49 (1000)
..+..+..+|..++..|+|+.|+.++.+|..+.|....+...+.
T Consensus 7 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~ 50 (137)
T 3q49_B 7 PSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRA 50 (137)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHH
Confidence 34677889999999999999999999999999998755444444
No 63
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=59.55 E-value=3.1 Score=36.14 Aligned_cols=31 Identities=13% Similarity=0.394 Sum_probs=24.8
Q ss_pred ecCCCCCcceEEeeecccceeccCCCCCceEEE
Q 001885 189 TMCPFCTVRYQYYRNVINKSIICQACNKPFVAY 221 (1000)
Q Consensus 189 T~C~~C~~~Yey~r~~ln~~L~C~nC~~~FvA~ 221 (1000)
-+||.|++..+|.+. ...|.|++|+..|--.
T Consensus 9 L~CP~ck~~L~~~~~--~~~LiC~~cg~~YPI~ 39 (69)
T 2pk7_A 9 LACPICKGPLKLSAD--KTELISKGAGLAYPIR 39 (69)
T ss_dssp CCCTTTCCCCEECTT--SSEEEETTTTEEEEEE
T ss_pred eeCCCCCCcCeEeCC--CCEEEcCCCCcEecCc
Confidence 379999999988654 6789999998776543
No 64
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=58.13 E-value=3.9 Score=35.38 Aligned_cols=32 Identities=13% Similarity=0.407 Sum_probs=25.2
Q ss_pred ecCCCCCcceEEeeecccceeccCCCCCceEEEe
Q 001885 189 TMCPFCTVRYQYYRNVINKSIICQACNKPFVAYE 222 (1000)
Q Consensus 189 T~C~~C~~~Yey~r~~ln~~L~C~nC~~~FvA~e 222 (1000)
-+||.|++..+|.+. ...|.|++|+..|--.+
T Consensus 9 L~CP~ck~~L~~~~~--~~~LiC~~cg~~YPI~d 40 (68)
T 2jr6_A 9 LVCPVTKGRLEYHQD--KQELWSRQAKLAYPIKD 40 (68)
T ss_dssp CBCSSSCCBCEEETT--TTEEEETTTTEEEEEET
T ss_pred eECCCCCCcCeEeCC--CCEEEcCCCCcEecCCC
Confidence 379999999988753 57899999998775443
No 65
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=58.10 E-value=86 Score=26.60 Aligned_cols=40 Identities=23% Similarity=0.218 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHH
Q 001885 6 DEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENIS 45 (1000)
Q Consensus 6 eEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~ 45 (1000)
+.|..+..+|..++..|++..|..++.++..+.|....+.
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~ 41 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYI 41 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHH
Confidence 4577788999999999999999999999999999865443
No 66
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=56.94 E-value=16 Score=34.01 Aligned_cols=32 Identities=9% Similarity=0.010 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 001885 6 DEAIRVKGIAESKMQSNDFAGARKFALKAQHL 37 (1000)
Q Consensus 6 eEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L 37 (1000)
+.|..+++++..++..|+|..|+..+.+|..+
T Consensus 9 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~ 40 (162)
T 3rkv_A 9 KSVEALRQKGNELFVQKDYKEAIDAYRDALTR 40 (162)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 46889999999999999999999999999999
No 67
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=56.65 E-value=23 Score=32.17 Aligned_cols=40 Identities=23% Similarity=0.191 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHH
Q 001885 6 DEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENIS 45 (1000)
Q Consensus 6 eEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~ 45 (1000)
+.|..+..+|..++..|++..|+.++.++..+.|....+.
T Consensus 11 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~ 50 (166)
T 1a17_A 11 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYY 50 (166)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHH
Confidence 5678889999999999999999999999999999864443
No 68
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=56.14 E-value=4.3 Score=35.05 Aligned_cols=32 Identities=13% Similarity=0.265 Sum_probs=24.9
Q ss_pred ecCCCCCcceEEeeecccceeccCCCCCceEEEe
Q 001885 189 TMCPFCTVRYQYYRNVINKSIICQACNKPFVAYE 222 (1000)
Q Consensus 189 T~C~~C~~~Yey~r~~ln~~L~C~nC~~~FvA~e 222 (1000)
-+||.|++..+|... ...|.|++|+..|--.+
T Consensus 11 L~CP~ck~~L~~~~~--~g~LvC~~c~~~YPI~d 42 (67)
T 2jny_A 11 LACPKDKGPLRYLES--EQLLVNERLNLAYRIDD 42 (67)
T ss_dssp CBCTTTCCBCEEETT--TTEEEETTTTEEEEEET
T ss_pred hCCCCCCCcCeEeCC--CCEEEcCCCCccccCCC
Confidence 389999999888653 57899999987765443
No 69
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=55.89 E-value=29 Score=32.53 Aligned_cols=46 Identities=13% Similarity=0.011 Sum_probs=38.2
Q ss_pred CCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHH
Q 001885 3 CNKDEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMI 48 (1000)
Q Consensus 3 ~NkeEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L 48 (1000)
.+-+.+.....+|..++..|+|..|+..+.+|..+.|....+...+
T Consensus 16 ~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 61 (148)
T 2vgx_A 16 ISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGL 61 (148)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHH
Confidence 4556777888899999999999999999999999999875544333
No 70
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=55.69 E-value=10 Score=37.73 Aligned_cols=36 Identities=11% Similarity=0.065 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCC
Q 001885 5 KDEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQD 40 (1000)
Q Consensus 5 keEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~ 40 (1000)
..+|..++.++..++..|+|+.|+..+.+|.++.|.
T Consensus 8 ~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~ 43 (159)
T 2hr2_A 8 VVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHT 43 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCC
Confidence 567999999999999999999999999999999998
No 71
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=55.62 E-value=25 Score=30.10 Aligned_cols=45 Identities=24% Similarity=0.162 Sum_probs=36.9
Q ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHH
Q 001885 4 NKDEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMI 48 (1000)
Q Consensus 4 NkeEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L 48 (1000)
+...+.....+|..++..++++.|..++.++..+.|....+...+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 52 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNR 52 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred chhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 345678888999999999999999999999999999764443333
No 72
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=54.76 E-value=1.2e+02 Score=28.92 Aligned_cols=37 Identities=16% Similarity=0.145 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChH
Q 001885 6 DEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLE 42 (1000)
Q Consensus 6 eEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le 42 (1000)
+.|..++.+|..++..|+|..|+.++.+|.++.|...
T Consensus 36 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~ 72 (198)
T 2fbn_A 36 QSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTE 72 (198)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhccc
Confidence 4577889999999999999999999999999988753
No 73
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=53.71 E-value=24 Score=31.35 Aligned_cols=42 Identities=17% Similarity=-0.005 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHH
Q 001885 8 AIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIM 49 (1000)
Q Consensus 8 A~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~ 49 (1000)
+.-+..+|..++..++++.|+.++.++.++.|....+...+.
T Consensus 65 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a 106 (148)
T 2dba_A 65 AVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRS 106 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHH
Confidence 667788899999999999999999999999998654433333
No 74
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=53.49 E-value=22 Score=34.31 Aligned_cols=38 Identities=13% Similarity=0.038 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHH
Q 001885 8 AIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENIS 45 (1000)
Q Consensus 8 A~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~ 45 (1000)
+.-...+|..++..|++..|+.++.+|.++.|....+.
T Consensus 88 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 125 (198)
T 2fbn_A 88 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKAL 125 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHH
Confidence 34566788888899999999999999999988765443
No 75
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=53.45 E-value=27 Score=30.44 Aligned_cols=43 Identities=7% Similarity=-0.015 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHH
Q 001885 7 EAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIM 49 (1000)
Q Consensus 7 EA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~ 49 (1000)
.+.-+..+|..++..|+++.|+.++.+|.++.|........+.
T Consensus 18 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la 60 (115)
T 2kat_A 18 NMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLG 60 (115)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHH
Confidence 3456678899999999999999999999999998754443333
No 76
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=52.15 E-value=31 Score=29.13 Aligned_cols=33 Identities=6% Similarity=0.089 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCh
Q 001885 9 IRVKGIAESKMQSNDFAGARKFALKAQHLYQDL 41 (1000)
Q Consensus 9 ~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~l 41 (1000)
.-...+|..++..|+++.|+..+.+|.+++|..
T Consensus 39 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 39 VGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 345677889999999999999999999999986
No 77
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=52.01 E-value=23 Score=31.95 Aligned_cols=42 Identities=10% Similarity=-0.099 Sum_probs=34.5
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHHHh
Q 001885 10 RVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIMVC 51 (1000)
Q Consensus 10 ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~~~ 51 (1000)
.+..+|..++..|+++.|+..+.+|.++.|....+...+..+
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~ 60 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLT 60 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 457789999999999999999999999999876554444433
No 78
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=51.82 E-value=30 Score=29.02 Aligned_cols=42 Identities=12% Similarity=0.010 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHH
Q 001885 8 AIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIM 49 (1000)
Q Consensus 8 A~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~ 49 (1000)
+.-...+|..++..|+++.|+..+.++..+.|....+...++
T Consensus 38 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a 79 (118)
T 1elw_A 38 HVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKA 79 (118)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHH
Confidence 445677888999999999999999999999998655444443
No 79
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=51.51 E-value=32 Score=28.60 Aligned_cols=34 Identities=9% Similarity=-0.005 Sum_probs=26.2
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHH
Q 001885 11 VKGIAESKMQSNDFAGARKFALKAQHLYQDLENI 44 (1000)
Q Consensus 11 a~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i 44 (1000)
+..+|..++..|+++.|+..+.++.++.|....+
T Consensus 9 ~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 42 (112)
T 2kck_A 9 YYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKY 42 (112)
T ss_dssp GGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHH
Confidence 4556777888888888888888888888876443
No 80
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=50.79 E-value=32 Score=29.99 Aligned_cols=33 Identities=15% Similarity=0.020 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCh
Q 001885 9 IRVKGIAESKMQSNDFAGARKFALKAQHLYQDL 41 (1000)
Q Consensus 9 ~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~l 41 (1000)
.-...+|..++..|+++.|+.++.++..++|..
T Consensus 40 ~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~ 72 (129)
T 2xev_A 40 NALYWLGESYYATRNFQLAEAQFRDLVSRYPTH 72 (129)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCC
Confidence 455678899999999999999999999999986
No 81
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=49.87 E-value=8.6 Score=41.65 Aligned_cols=39 Identities=8% Similarity=-0.153 Sum_probs=31.9
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHH
Q 001885 10 RVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMI 48 (1000)
Q Consensus 10 ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L 48 (1000)
-...+|..++..++|..|+.++.+|.+++|....+...+
T Consensus 232 ~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l 270 (338)
T 2if4_A 232 CHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRR 270 (338)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 356789999999999999999999999999865443333
No 82
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=49.51 E-value=30 Score=29.03 Aligned_cols=35 Identities=14% Similarity=0.021 Sum_probs=30.5
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHH
Q 001885 10 RVKGIAESKMQSNDFAGARKFALKAQHLYQDLENI 44 (1000)
Q Consensus 10 ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i 44 (1000)
-...+|..++..|+++.|+..+.+|.+++|....+
T Consensus 37 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 71 (99)
T 2kc7_A 37 AYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPAL 71 (99)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHH
Confidence 45667888999999999999999999999987544
No 83
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=49.32 E-value=32 Score=30.96 Aligned_cols=41 Identities=7% Similarity=-0.088 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHH
Q 001885 9 IRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIM 49 (1000)
Q Consensus 9 ~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~ 49 (1000)
.-+..+|..++..|+++.|+..+.+|.++.|....+...|.
T Consensus 52 ~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la 92 (121)
T 1hxi_A 52 EAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALA 92 (121)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 34456778889999999999999999999998755443333
No 84
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=48.78 E-value=26 Score=30.38 Aligned_cols=43 Identities=19% Similarity=0.081 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHH
Q 001885 7 EAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIM 49 (1000)
Q Consensus 7 EA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~ 49 (1000)
.+..+..+|..++..|+++.|+.++.++.++.|....+...++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la 57 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRA 57 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHH
Confidence 3566788899999999999999999999999997644433333
No 85
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=48.32 E-value=28 Score=30.08 Aligned_cols=42 Identities=14% Similarity=-0.122 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHH
Q 001885 8 AIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIM 49 (1000)
Q Consensus 8 A~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~ 49 (1000)
+.-+..+|..++..++++.|+.++.++.++.|....+...++
T Consensus 50 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la 91 (133)
T 2lni_A 50 AKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKA 91 (133)
T ss_dssp HHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHH
Confidence 556677889999999999999999999999998655444443
No 86
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=46.95 E-value=40 Score=28.71 Aligned_cols=41 Identities=15% Similarity=0.081 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHH
Q 001885 8 AIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMI 48 (1000)
Q Consensus 8 A~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L 48 (1000)
+.-...+|..++..|++..|+.++.++..+.|....+...+
T Consensus 46 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 86 (131)
T 2vyi_A 46 AVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRM 86 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHH
Confidence 45567788899999999999999999999999865443333
No 87
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.72 E-value=34 Score=30.25 Aligned_cols=36 Identities=14% Similarity=0.131 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCh
Q 001885 6 DEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDL 41 (1000)
Q Consensus 6 eEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~l 41 (1000)
..+..+..+|..++..|+|..|+.++.++.++.|..
T Consensus 26 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~ 61 (148)
T 2dba_A 26 SSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATP 61 (148)
T ss_dssp CCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccc
Confidence 457788899999999999999999999999999986
No 88
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=46.59 E-value=22 Score=33.30 Aligned_cols=42 Identities=5% Similarity=-0.103 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHH
Q 001885 8 AIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIM 49 (1000)
Q Consensus 8 A~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~ 49 (1000)
+.-+..+|..++..|++++|+..+.+|..+.|....+.-.+.
T Consensus 55 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg 96 (148)
T 2vgx_A 55 SRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAA 96 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHH
Confidence 345677899999999999999999999999998755444443
No 89
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=46.48 E-value=1.6e+02 Score=31.52 Aligned_cols=36 Identities=11% Similarity=-0.012 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCh
Q 001885 6 DEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDL 41 (1000)
Q Consensus 6 eEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~l 41 (1000)
+.|..+..+|..++..|+|..|+..+.+|.++.|..
T Consensus 145 ~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~ 180 (336)
T 1p5q_A 145 EQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYE 180 (336)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhcc
Confidence 457788899999999999999999999999999986
No 90
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=45.19 E-value=42 Score=29.58 Aligned_cols=41 Identities=10% Similarity=-0.092 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHH
Q 001885 9 IRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIM 49 (1000)
Q Consensus 9 ~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~ 49 (1000)
.-...+|..++..|+++.|+..+.+|.++.|....+...+.
T Consensus 44 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~ 84 (137)
T 3q49_B 44 VYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLG 84 (137)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHH
Confidence 34566788899999999999999999999998754444333
No 91
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=45.08 E-value=11 Score=31.33 Aligned_cols=28 Identities=21% Similarity=0.630 Sum_probs=23.3
Q ss_pred cCCCCCcceEEeeecccceeccC--CCCCceEEE
Q 001885 190 MCPFCTVRYQYYRNVINKSIICQ--ACNKPFVAY 221 (1000)
Q Consensus 190 ~C~~C~~~Yey~r~~ln~~L~C~--nC~~~FvA~ 221 (1000)
.||.|+...+|.. ..|.|+ .|+..|--.
T Consensus 12 ~CP~c~~~L~~~~----~~L~C~~~~c~~~YPI~ 41 (56)
T 2kpi_A 12 ACPACHAPLEERD----AELICTGQDCGLAYPVR 41 (56)
T ss_dssp CCSSSCSCEEEET----TEEEECSSSCCCEEEEE
T ss_pred eCCCCCCcceecC----CEEEcCCcCCCcEEeeE
Confidence 8999999988876 778999 899877543
No 92
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=44.00 E-value=48 Score=27.90 Aligned_cols=37 Identities=16% Similarity=0.144 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHH
Q 001885 8 AIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENI 44 (1000)
Q Consensus 8 A~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i 44 (1000)
+.-+..+|..++..|+++.|+.++.++..+.|....+
T Consensus 43 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 79 (125)
T 1na0_A 43 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEA 79 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHH
Confidence 4456778899999999999999999999999876443
No 93
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=43.68 E-value=47 Score=28.88 Aligned_cols=32 Identities=16% Similarity=0.237 Sum_probs=29.4
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhcCChH
Q 001885 11 VKGIAESKMQSNDFAGARKFALKAQHLYQDLE 42 (1000)
Q Consensus 11 a~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le 42 (1000)
...+|..++..|+|..|...+.++.+++|...
T Consensus 5 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~ 36 (129)
T 2xev_A 5 AYNVAFDALKNGKYDDASQLFLSFLELYPNGV 36 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSST
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCc
Confidence 56789999999999999999999999999865
No 94
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=43.61 E-value=2.1e+02 Score=27.43 Aligned_cols=35 Identities=20% Similarity=0.068 Sum_probs=33.0
Q ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhc
Q 001885 4 NKDEAIRVKGIAESKMQSNDFAGARKFALKAQHLY 38 (1000)
Q Consensus 4 NkeEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~ 38 (1000)
.+.+|..+..+|..++..|+++.|+.++.++..+.
T Consensus 1 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~ 35 (258)
T 3uq3_A 1 GGSMADKEKAEGNKFYKARQFDEAIEHYNKAWELH 35 (258)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred CchHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh
Confidence 36789999999999999999999999999999998
No 95
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=43.37 E-value=46 Score=29.41 Aligned_cols=31 Identities=10% Similarity=0.052 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhc
Q 001885 8 AIRVKGIAESKMQSNDFAGARKFALKAQHLY 38 (1000)
Q Consensus 8 A~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~ 38 (1000)
|.-|.+++..++..+||..|...+.+|.++.
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~ 35 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQL 35 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhh
Confidence 5678999999999999999999999999986
No 96
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=43.36 E-value=53 Score=27.62 Aligned_cols=37 Identities=16% Similarity=0.144 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHH
Q 001885 8 AIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENI 44 (1000)
Q Consensus 8 A~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i 44 (1000)
+.-+..+|..++..|++..|+.++.++..+.|....+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 45 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEA 45 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHH
Confidence 5667788999999999999999999999999976443
No 97
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=43.24 E-value=50 Score=29.84 Aligned_cols=42 Identities=14% Similarity=-0.073 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHH
Q 001885 8 AIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIM 49 (1000)
Q Consensus 8 A~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~ 49 (1000)
+.-+..+|..++..|++..|+.++.++.+++|....+...+.
T Consensus 47 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a 88 (166)
T 1a17_A 47 AIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRA 88 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHH
Confidence 455678899999999999999999999999998754443333
No 98
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=43.16 E-value=54 Score=28.93 Aligned_cols=43 Identities=12% Similarity=0.068 Sum_probs=33.3
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHHHhhh
Q 001885 11 VKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIMVCDV 53 (1000)
Q Consensus 11 a~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~~~dv 53 (1000)
...+|..+++.|++..|+.++.+|.++.|....+..-+..++.
T Consensus 49 ~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~n~~~~~~ 91 (104)
T 2v5f_A 49 LDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLKYFEY 91 (104)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHhhHHHHHH
Confidence 3456777889999999999999999999998666444443333
No 99
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=42.66 E-value=56 Score=27.84 Aligned_cols=44 Identities=14% Similarity=0.105 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHHHhh
Q 001885 8 AIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIMVCD 52 (1000)
Q Consensus 8 A~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~~~d 52 (1000)
+.-...+|..++..|+++.|+.++.++..+.|.. .+...+..+.
T Consensus 79 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~l~~~~ 122 (131)
T 1elr_A 79 AKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTP-DVLKKCQQAE 122 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCH-HHHHHHHHHH
Confidence 4556778889999999999999999999999964 4444444443
No 100
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=42.37 E-value=42 Score=30.61 Aligned_cols=41 Identities=5% Similarity=-0.092 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHH
Q 001885 9 IRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIM 49 (1000)
Q Consensus 9 ~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~ 49 (1000)
.-+..+|..++..|+++.|+..+.+|..+.|....+.-.+.
T Consensus 53 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 93 (142)
T 2xcb_A 53 RYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAA 93 (142)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHH
Confidence 34556788899999999999999999999998755443333
No 101
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=42.29 E-value=36 Score=32.55 Aligned_cols=42 Identities=14% Similarity=-0.065 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHHH
Q 001885 9 IRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIMV 50 (1000)
Q Consensus 9 ~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~~ 50 (1000)
.-+..+|..++..|+|++|+..+.+|.++.|....+.-.+..
T Consensus 71 ~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~ 112 (151)
T 3gyz_A 71 DYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQ 112 (151)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHHH
Confidence 345667888999999999999999999999987555444443
No 102
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=42.05 E-value=1.1e+02 Score=30.63 Aligned_cols=32 Identities=13% Similarity=-0.017 Sum_probs=29.0
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCh
Q 001885 10 RVKGIAESKMQSNDFAGARKFALKAQHLYQDL 41 (1000)
Q Consensus 10 ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~l 41 (1000)
....+|..++..|++..|+..+.++..++|..
T Consensus 150 ~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~ 181 (261)
T 3qky_A 150 KQYEAARLYERRELYEAAAVTYEAVFDAYPDT 181 (261)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHCCCC
Confidence 34788999999999999999999999999984
No 103
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=41.52 E-value=10 Score=36.26 Aligned_cols=46 Identities=11% Similarity=0.024 Sum_probs=34.8
Q ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHH
Q 001885 4 NKDEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIM 49 (1000)
Q Consensus 4 NkeEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~ 49 (1000)
|........+.|..++..|+++.|+..+.++..+.|....+...+.
T Consensus 2 ~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la 47 (176)
T 2r5s_A 2 NASPDEQLLKQVSELLQQGEHAQALNVIQTLSDELQSRGDVKLAKA 47 (176)
T ss_dssp ----CTTHHHHHHHHHHTTCHHHHHHHHHTSCHHHHTSHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHH
Confidence 5555666788899999999999999999999999998765544444
No 104
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=41.46 E-value=26 Score=38.65 Aligned_cols=44 Identities=18% Similarity=0.104 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHH
Q 001885 6 DEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIM 49 (1000)
Q Consensus 6 eEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~ 49 (1000)
..+.-+..+|..++..++|+.|+.++.+|.++.|....+.-.++
T Consensus 271 ~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg 314 (370)
T 1ihg_A 271 VALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRA 314 (370)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCchhHHHHHHHH
Confidence 45667788899999999999999999999999998755444443
No 105
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=40.36 E-value=1.9e+02 Score=32.48 Aligned_cols=36 Identities=14% Similarity=-0.021 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCh
Q 001885 6 DEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDL 41 (1000)
Q Consensus 6 eEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~l 41 (1000)
+.|..++.+|..++..++|..|+..+.+|.++.|..
T Consensus 266 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~ 301 (457)
T 1kt0_A 266 EQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEME 301 (457)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhccc
Confidence 457788899999999999999999999999999986
No 106
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=39.82 E-value=31 Score=28.68 Aligned_cols=40 Identities=5% Similarity=-0.096 Sum_probs=31.4
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhcCC--hHHHHHHHH
Q 001885 10 RVKGIAESKMQSNDFAGARKFALKAQHLYQD--LENISQMIM 49 (1000)
Q Consensus 10 ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~--le~i~q~L~ 49 (1000)
-...+|..++..|+++.|+.++.++.++.|. ...+...++
T Consensus 42 ~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~ 83 (112)
T 2kck_A 42 YWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKA 83 (112)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHH
Confidence 3456788889999999999999999999998 644433333
No 107
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=39.64 E-value=48 Score=29.07 Aligned_cols=41 Identities=15% Similarity=-0.039 Sum_probs=33.0
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHHHh
Q 001885 11 VKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIMVC 51 (1000)
Q Consensus 11 a~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~~~ 51 (1000)
...+|..++..|+++.|+..+.++..+.|....+.......
T Consensus 64 ~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ai 104 (117)
T 3k9i_A 64 RVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYKQAI 104 (117)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 34567778999999999999999999999987665544433
No 108
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=39.56 E-value=64 Score=31.89 Aligned_cols=45 Identities=11% Similarity=0.031 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHHHhhh
Q 001885 9 IRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIMVCDV 53 (1000)
Q Consensus 9 ~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~~~dv 53 (1000)
..+..+|..+++.+||..|++++.++.++.|.......+...++.
T Consensus 72 d~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~ie~ 116 (152)
T 1pc2_A 72 DYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDK 116 (152)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 345677888899999999999999999999988766666665554
No 109
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=37.34 E-value=51 Score=34.30 Aligned_cols=43 Identities=16% Similarity=0.116 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHHH
Q 001885 8 AIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIMV 50 (1000)
Q Consensus 8 A~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~~ 50 (1000)
+.....+|..+++.|++++|+..+.+|..+.|....+...|+.
T Consensus 117 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~ 159 (287)
T 3qou_A 117 EELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAE 159 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred hhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHH
Confidence 3456788999999999999999999999999988665555543
No 110
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=37.12 E-value=61 Score=30.15 Aligned_cols=41 Identities=7% Similarity=-0.065 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHH
Q 001885 8 AIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMI 48 (1000)
Q Consensus 8 A~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L 48 (1000)
+.-...+|..++..|+++.|+..+.+|.++.|....+...|
T Consensus 65 ~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 105 (150)
T 4ga2_A 65 PKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKI 105 (150)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 34456678889999999999999999999999875543333
No 111
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=36.90 E-value=52 Score=33.61 Aligned_cols=39 Identities=10% Similarity=-0.026 Sum_probs=30.9
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHH
Q 001885 11 VKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIM 49 (1000)
Q Consensus 11 a~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~ 49 (1000)
...+|..++..|+++.|+.++.++.++.|....+...+.
T Consensus 275 ~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 313 (359)
T 3ieg_A 275 KERICHCFSKDEKPVEAIRICSEVLQMEPDNVNALKDRA 313 (359)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHHHHH
Confidence 456788999999999999999999999997654443333
No 112
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=36.37 E-value=53 Score=35.22 Aligned_cols=42 Identities=17% Similarity=0.006 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHH
Q 001885 8 AIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIM 49 (1000)
Q Consensus 8 A~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~ 49 (1000)
+.-+..+|..++..|+|+.|+.++.+|.++.|....+...+.
T Consensus 196 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg 237 (336)
T 1p5q_A 196 LASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRG 237 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 667788999999999999999999999999998755443333
No 113
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=36.15 E-value=1.9e+02 Score=28.42 Aligned_cols=31 Identities=16% Similarity=0.156 Sum_probs=18.8
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhcCC
Q 001885 10 RVKGIAESKMQSNDFAGARKFALKAQHLYQD 40 (1000)
Q Consensus 10 ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~ 40 (1000)
....+|..++..|+|++|+..+.++..++|.
T Consensus 6 ~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~ 36 (225)
T 2yhc_A 6 EIYATAQQKLQDGNWRQAITQLEALDNRYPF 36 (225)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 4455566666666666666666666666664
No 114
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=35.97 E-value=60 Score=30.69 Aligned_cols=41 Identities=15% Similarity=-0.008 Sum_probs=32.9
Q ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHH
Q 001885 4 NKDEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENI 44 (1000)
Q Consensus 4 NkeEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i 44 (1000)
+.+.+.-...+|..++..|+++.|+.++.++.++.|....+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 44 (225)
T 2vq2_A 4 ANQVSNIKTQLAMEYMRGQDYRQATASIEDALKSDPKNELA 44 (225)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCccchHH
Confidence 44567777888888999999999999999999998876443
No 115
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=35.70 E-value=46 Score=31.11 Aligned_cols=43 Identities=19% Similarity=0.070 Sum_probs=32.1
Q ss_pred HHHHHHHHHH-HHhcCCH--HHHHHHHHHHHhhcCChHHHHHHHHH
Q 001885 8 AIRVKGIAES-KMQSNDF--AGARKFALKAQHLYQDLENISQMIMV 50 (1000)
Q Consensus 8 A~ra~~iAe~-~l~~~D~--~gA~~~a~KA~~L~P~le~i~q~L~~ 50 (1000)
+.-...+|.. ++..|++ +.|+..+.++.++.|....+...+..
T Consensus 78 ~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~ 123 (177)
T 2e2e_A 78 AELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLAS 123 (177)
T ss_dssp HHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 3445667777 7788888 99999999999999987555444443
No 116
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=35.11 E-value=56 Score=33.93 Aligned_cols=37 Identities=11% Similarity=-0.032 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHH
Q 001885 8 AIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENI 44 (1000)
Q Consensus 8 A~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i 44 (1000)
|..+..+|..++..|+|+.|+..+.+|..+.|....+
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 40 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVY 40 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHH
Confidence 5567778888888899999999999999888876443
No 117
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=34.94 E-value=70 Score=27.99 Aligned_cols=39 Identities=10% Similarity=0.158 Sum_probs=32.6
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHH
Q 001885 10 RVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMI 48 (1000)
Q Consensus 10 ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L 48 (1000)
.-+.++|.+++.|+++.|...+-+|...||....+.+++
T Consensus 19 ~eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~LL~i~ 57 (73)
T 3ax2_A 19 EEIQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVL 57 (73)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 456788999999999999999999999999985554444
No 118
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=34.46 E-value=70 Score=29.89 Aligned_cols=35 Identities=9% Similarity=-0.029 Sum_probs=21.4
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHH
Q 001885 10 RVKGIAESKMQSNDFAGARKFALKAQHLYQDLENI 44 (1000)
Q Consensus 10 ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i 44 (1000)
-...++...+..+++..|...+.+|..+.|....+
T Consensus 75 ~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~ 109 (184)
T 3vtx_A 75 AYYILGSANFMIDEKQAAIDALQRAIALNTVYADA 109 (184)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHH
Confidence 33445566666666666666666666666665443
No 119
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=33.80 E-value=66 Score=29.98 Aligned_cols=39 Identities=13% Similarity=0.061 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHH
Q 001885 8 AIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQ 46 (1000)
Q Consensus 8 A~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q 46 (1000)
+.-+..+|..++..|+++.|+.++.+|.++.|....+..
T Consensus 44 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 82 (177)
T 2e2e_A 44 SEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYA 82 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Confidence 445677889999999999999999999999998754433
No 120
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=33.70 E-value=83 Score=30.75 Aligned_cols=33 Identities=9% Similarity=0.032 Sum_probs=28.3
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHH
Q 001885 14 IAESKMQSNDFAGARKFALKAQHLYQDLENISQ 46 (1000)
Q Consensus 14 iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q 46 (1000)
+|..++..|+++.|+..+.+|.+++|....+.-
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 92 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPNNVDCLE 92 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHH
Confidence 888899999999999999999999998754433
No 121
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=33.65 E-value=46 Score=31.85 Aligned_cols=39 Identities=10% Similarity=-0.101 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHH
Q 001885 8 AIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQ 46 (1000)
Q Consensus 8 A~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q 46 (1000)
+.-...+|..++..|+++.|+.++.+|.+++|....+..
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 75 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYF 75 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHH
Confidence 345677889999999999999999999999998754433
No 122
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=33.05 E-value=69 Score=32.67 Aligned_cols=40 Identities=10% Similarity=-0.091 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHH
Q 001885 7 EAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQ 46 (1000)
Q Consensus 7 EA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q 46 (1000)
++.....+|..++..|+++.|+.++.++..++|....+..
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~ 41 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYY 41 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHH
Confidence 4567788899999999999999999999999988654433
No 123
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=32.94 E-value=2.2e+02 Score=32.28 Aligned_cols=31 Identities=16% Similarity=-0.003 Sum_probs=19.1
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhhcCChH
Q 001885 12 KGIAESKMQSNDFAGARKFALKAQHLYQDLE 42 (1000)
Q Consensus 12 ~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le 42 (1000)
..+|..++..|+++.|++.+.+|.++.|...
T Consensus 78 ~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~ 108 (477)
T 1wao_1 78 YRRAASNMALGKFRAALRDYETVVKVKPHDK 108 (477)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHSTTCT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 3445556666666666666666666666543
No 124
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=32.71 E-value=1.6e+02 Score=30.80 Aligned_cols=29 Identities=14% Similarity=0.050 Sum_probs=16.2
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhhcCChH
Q 001885 14 IAESKMQSNDFAGARKFALKAQHLYQDLE 42 (1000)
Q Consensus 14 iAe~~l~~~D~~gA~~~a~KA~~L~P~le 42 (1000)
+|..++..|++++|...+.+|..+.|...
T Consensus 206 la~~~~~~g~~~eA~~~l~~al~~~p~~~ 234 (291)
T 3mkr_A 206 QAACHMAQGRWEAAEGVLQEALDKDSGHP 234 (291)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 34445555666666666666666655543
No 125
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=32.40 E-value=23 Score=28.19 Aligned_cols=31 Identities=23% Similarity=0.529 Sum_probs=23.0
Q ss_pred cCCCCCc-ceEEeeecccceeccCCCCCceEEEe
Q 001885 190 MCPFCTV-RYQYYRNVINKSIICQACNKPFVAYE 222 (1000)
Q Consensus 190 ~C~~C~~-~Yey~r~~ln~~L~C~nC~~~FvA~e 222 (1000)
.||.|+. ...|.. -...|.|..|+..|---.
T Consensus 7 ~CP~C~~~~l~~d~--~~gelvC~~CG~v~~e~~ 38 (50)
T 1pft_A 7 VCPACESAELIYDP--ERGEIVCAKCGYVIEENI 38 (50)
T ss_dssp SCTTTSCCCEEEET--TTTEEEESSSCCBCCCCC
T ss_pred eCcCCCCcceEEcC--CCCeEECcccCCcccccc
Confidence 6999998 766644 356799999998865433
No 126
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=32.31 E-value=50 Score=32.39 Aligned_cols=38 Identities=8% Similarity=0.022 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHH
Q 001885 8 AIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENIS 45 (1000)
Q Consensus 8 A~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~ 45 (1000)
+..++..|..++..|+++.|+..+.++.++.|....+.
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 41 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMY 41 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHH
Confidence 45678899999999999999999999999999865443
No 127
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=32.27 E-value=67 Score=30.82 Aligned_cols=43 Identities=12% Similarity=0.075 Sum_probs=35.5
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHHHhhh
Q 001885 11 VKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIMVCDV 53 (1000)
Q Consensus 11 a~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~~~dv 53 (1000)
..-+|..+++.|||..|++++....+..|....+..+...++.
T Consensus 77 lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i~~ 119 (126)
T 1nzn_A 77 VFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDK 119 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 4567889999999999999999999999998666665555543
No 128
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=32.06 E-value=70 Score=29.37 Aligned_cols=39 Identities=10% Similarity=0.158 Sum_probs=32.6
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHH
Q 001885 10 RVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMI 48 (1000)
Q Consensus 10 ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L 48 (1000)
.-+.++|.+++.|+++.|...+-+|...||....+.+++
T Consensus 22 ~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~LL~i~ 60 (95)
T 1om2_A 22 EEIQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVL 60 (95)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 457788999999999999999999999999975544443
No 129
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=31.99 E-value=1.2e+02 Score=31.47 Aligned_cols=34 Identities=6% Similarity=-0.084 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCh
Q 001885 8 AIRVKGIAESKMQSNDFAGARKFALKAQHLYQDL 41 (1000)
Q Consensus 8 A~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~l 41 (1000)
|.-...++..+...|+++.|+.++.+|..++|..
T Consensus 77 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~ 110 (292)
T 1qqe_A 77 GNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHR 110 (292)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc
Confidence 4444556666677777777777777777777644
No 130
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=31.53 E-value=70 Score=27.04 Aligned_cols=33 Identities=15% Similarity=0.163 Sum_probs=26.6
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHH
Q 001885 11 VKGIAESKMQSNDFAGARKFALKAQHLYQDLEN 43 (1000)
Q Consensus 11 a~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~ 43 (1000)
+..+|..++..|+++.|+.++.++.++.|....
T Consensus 4 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 36 (136)
T 2fo7_A 4 WYNLGNAYYKQGDYDEAIEYYQKALELDPRSAE 36 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHHcCCcchh
Confidence 456788888889999999999999888887543
No 131
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=30.82 E-value=1.5e+02 Score=35.91 Aligned_cols=38 Identities=16% Similarity=0.245 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHH
Q 001885 7 EAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENI 44 (1000)
Q Consensus 7 EA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i 44 (1000)
-|.....+|..+++.|++++|++++++|.++.|....+
T Consensus 8 ~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a 45 (723)
T 4gyw_A 8 HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAA 45 (723)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Confidence 35556667778888888888888888888888876433
No 132
>2k5r_A Uncharacterized protein XF2673; solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Xylella fastidiosa TEMECULA1}
Probab=29.88 E-value=20 Score=33.10 Aligned_cols=34 Identities=9% Similarity=0.146 Sum_probs=25.6
Q ss_pred ecCCCCCcceEEeee-------------------------cccceeccCCCCCceEEEe
Q 001885 189 TMCPFCTVRYQYYRN-------------------------VINKSIICQACNKPFVAYE 222 (1000)
Q Consensus 189 T~C~~C~~~Yey~r~-------------------------~ln~~L~C~nC~~~FvA~e 222 (1000)
-+||.|+...+|... .+...|.|++|+..|--.+
T Consensus 9 LaCP~cK~pL~l~~~~~~~~~~ca~~~~~~~~~~~~~~~e~~~~~LvC~~c~~~YPI~d 67 (97)
T 2k5r_A 9 LCSPDTRQPLSLLESKGLEALNKAIVSGTVQRADGSIQNQSLHEALITRDRKQVFRIED 67 (97)
T ss_dssp CCCCTTSSCCEECCHHHHHHHHHHHHHTCCBCTTSCBCCCCCSEEEECTTSCEEEEEET
T ss_pred eECCCCCCcccccccchhhhhhhhhhccccccccccccccccCCeEEcCCCCCCccccC
Confidence 379999999988765 1346799999998875443
No 133
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=29.32 E-value=54 Score=36.97 Aligned_cols=38 Identities=16% Similarity=0.025 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHH
Q 001885 8 AIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENIS 45 (1000)
Q Consensus 8 A~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~ 45 (1000)
+.-...+|..++..++|+.|+.++.+|.++.|....+.
T Consensus 317 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~ 354 (457)
T 1kt0_A 317 LAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGL 354 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHH
Confidence 66677899999999999999999999999999875443
No 134
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=28.70 E-value=95 Score=33.78 Aligned_cols=37 Identities=19% Similarity=0.193 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCh
Q 001885 5 KDEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDL 41 (1000)
Q Consensus 5 keEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~l 41 (1000)
++.|..++.+|..++..|+|..|+..+.++..+.|..
T Consensus 3 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~ 39 (514)
T 2gw1_A 3 DKYALALKDKGNQFFRNKKYDDAIKYYNWALELKEDP 39 (514)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCCCH
T ss_pred chhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCccH
Confidence 4678999999999999999999999999999999964
No 135
>3iqc_A FLIS, flagellar protein; chaperone, flagellum; 2.70A {Helicobacter pylori} SCOP: a.24.19.0 PDB: 3k1i_A
Probab=28.68 E-value=64 Score=31.01 Aligned_cols=36 Identities=11% Similarity=0.304 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCh
Q 001885 6 DEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDL 41 (1000)
Q Consensus 6 eEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~l 41 (1000)
|.|++.+..|..+++.+|++++-..+.||+.+.-.|
T Consensus 34 dgal~~l~~A~~ai~~~d~~~k~~~i~KA~~Ii~~L 69 (131)
T 3iqc_A 34 EGILRFSSQAKRCIENEDIEKKIYYINRVTDIFTEL 69 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 679999999999999999999999999999876443
No 136
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=27.89 E-value=89 Score=30.74 Aligned_cols=30 Identities=10% Similarity=-0.269 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhhc
Q 001885 9 IRVKGIAESKMQSNDFAGARKFALKAQHLY 38 (1000)
Q Consensus 9 ~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~ 38 (1000)
.-...+|..++..|++++|+..+.+|.++.
T Consensus 119 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 148 (217)
T 2pl2_A 119 PLHLQRGLVYALLGERDKAEASLKQALALE 148 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHhcc
Confidence 334455666666666666666666666666
No 137
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=27.49 E-value=99 Score=30.43 Aligned_cols=28 Identities=7% Similarity=-0.067 Sum_probs=14.9
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhhcCCh
Q 001885 14 IAESKMQSNDFAGARKFALKAQHLYQDL 41 (1000)
Q Consensus 14 iAe~~l~~~D~~gA~~~a~KA~~L~P~l 41 (1000)
+|..++..|++++|+..+.+|.++.|..
T Consensus 45 lg~~~~~~g~~~~A~~~~~~al~~~P~~ 72 (217)
T 2pl2_A 45 LARTQLKLGLVNPALENGKTLVARTPRY 72 (217)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCc
Confidence 3444455555555555555555555554
No 138
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=27.45 E-value=40 Score=33.87 Aligned_cols=27 Identities=22% Similarity=0.695 Sum_probs=19.8
Q ss_pred CcceecCCCCCcceEEeeecccceeccCCCCCc
Q 001885 185 PTFWTMCPFCTVRYQYYRNVINKSIICQACNKP 217 (1000)
Q Consensus 185 ~TFWT~C~~C~~~Yey~r~~ln~~L~C~nC~~~ 217 (1000)
.++|. |+.|+..|. . ...-.||-|..+
T Consensus 136 ~~~~~-C~~CG~i~~--~---~~p~~CP~Cg~~ 162 (170)
T 3pwf_A 136 KKVYI-CPICGYTAV--D---EAPEYCPVCGAP 162 (170)
T ss_dssp SCEEE-CTTTCCEEE--S---CCCSBCTTTCCB
T ss_pred CCeeE-eCCCCCeeC--C---CCCCCCCCCCCC
Confidence 46885 999998776 2 223389999976
No 139
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=27.43 E-value=77 Score=30.85 Aligned_cols=45 Identities=2% Similarity=0.048 Sum_probs=36.6
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHHHhhhhh
Q 001885 11 VKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIMVCDVHC 55 (1000)
Q Consensus 11 a~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~~~dv~~ 55 (1000)
+.-+|..+.+.|||..|++++.+..++.|....+..+....+..+
T Consensus 81 LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~Ie~ki 125 (134)
T 3o48_A 81 LYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVEDKI 125 (134)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Confidence 455788899999999999999999999999877666666555433
No 140
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=27.25 E-value=1.3e+02 Score=29.09 Aligned_cols=42 Identities=12% Similarity=-0.003 Sum_probs=34.4
Q ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHH
Q 001885 4 NKDEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENIS 45 (1000)
Q Consensus 4 NkeEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~ 45 (1000)
+.+.+.-...+|..++..|+++.|+.++.++..+.|....+.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~ 176 (258)
T 3uq3_A 135 NPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGY 176 (258)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHH
Confidence 345566677889999999999999999999999999865443
No 141
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=26.52 E-value=83 Score=29.71 Aligned_cols=38 Identities=16% Similarity=0.258 Sum_probs=30.7
Q ss_pred CCCC---HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhc
Q 001885 1 MDCN---KDEAIRVKGIAESKMQSNDFAGARKFALKAQHLY 38 (1000)
Q Consensus 1 Me~N---keEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~ 38 (1000)
|-++ -+.|..++..|...=..++|.+|+.+|..|..++
T Consensus 8 m~~~~~~l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l 48 (117)
T 2cpt_A 8 MSSTSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYF 48 (117)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 5545 5778888888888888899999999999876654
No 142
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=26.39 E-value=1.9e+02 Score=31.30 Aligned_cols=96 Identities=15% Similarity=0.012 Sum_probs=55.9
Q ss_pred HHHHHHHHHHh---cCCHHHHHHHHHHHHhhcCChHHHHHHHHHhhhhhhhcccccCCccCcccccccCcCCCHHHHHHH
Q 001885 10 RVKGIAESKMQ---SNDFAGARKFALKAQHLYQDLENISQMIMVCDVHCSAENKLFGNEMDWYGLLQIEQTANEATIKKQ 86 (1000)
Q Consensus 10 ra~~iAe~~l~---~~D~~gA~~~a~KA~~L~P~le~i~q~L~~~dv~~aa~~k~~g~~~D~Y~ILgV~~~A~~~eIKka 86 (1000)
-...+|..++. .|+++.|+.++.++..+.|....+...+..+... .| +.++-...
T Consensus 414 ~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-------~g---------------~~~~A~~~ 471 (514)
T 2gw1_A 414 PLVGKATLLTRNPTVENFIEATNLLEKASKLDPRSEQAKIGLAQMKLQ-------QE---------------DIDEAITL 471 (514)
T ss_dssp HHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-------TT---------------CHHHHHHH
T ss_pred HHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-------hc---------------CHHHHHHH
Confidence 34556777788 9999999999999999999875544333322210 11 23333444
Q ss_pred HHHHHHHhCCCCCCChhHHHHHHHHHHHHHHcCCchhHHHHh
Q 001885 87 YRKFALQLHPDKNKFPGAETAFKLIGEAQRVLLDKDKRSLHD 128 (1000)
Q Consensus 87 YRkLal~~HPDKn~~~~A~~aFk~I~eAy~vLsDp~kR~~YD 128 (1000)
|+ .++.+.|+......+......+.....++.+|..+..|.
T Consensus 472 ~~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (514)
T 2gw1_A 472 FE-ESADLARTMEEKLQAITFAEAAKVQQRIRSDPVLAKKIQ 512 (514)
T ss_dssp HH-HHHHHCSSHHHHHHHHHHHHHHHHHHHHTSTHHHHHHHH
T ss_pred HH-HHHHhccccHHHHHHHHHHHHHHHHHHhhCCHHHHHHhh
Confidence 44 355666753221222222333444456677777776654
No 143
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=26.06 E-value=92 Score=30.64 Aligned_cols=44 Identities=2% Similarity=0.058 Sum_probs=36.2
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHHHHhhhh
Q 001885 11 VKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMIMVCDVH 54 (1000)
Q Consensus 11 a~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L~~~dv~ 54 (1000)
+.-+|..+.+.|||..|++++....++.|....+..+....+..
T Consensus 80 LYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~Ie~~ 123 (144)
T 1y8m_A 80 LYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVEDK 123 (144)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 45578889999999999999999999999987666666555543
No 144
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=25.86 E-value=1.2e+02 Score=29.32 Aligned_cols=33 Identities=12% Similarity=0.010 Sum_probs=20.8
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHH
Q 001885 12 KGIAESKMQSNDFAGARKFALKAQHLYQDLENI 44 (1000)
Q Consensus 12 ~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i 44 (1000)
..+|..++..|+++.|++++.+|.++.|....+
T Consensus 46 ~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 78 (228)
T 4i17_A 46 YNCGVCADNIKKYKEAADYFDIAIKKNYNLANA 78 (228)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHH
T ss_pred HHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHH
Confidence 335666666666666666666666666665433
No 145
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=25.86 E-value=98 Score=30.07 Aligned_cols=32 Identities=13% Similarity=0.092 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcC
Q 001885 8 AIRVKGIAESKMQSNDFAGARKFALKAQHLYQ 39 (1000)
Q Consensus 8 A~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P 39 (1000)
+..+..+|..++..|+|..|+.++.+|..+.|
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~ 38 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLKLTN 38 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhccC
Confidence 35567778888888888888888888888887
No 146
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=25.61 E-value=97 Score=30.96 Aligned_cols=34 Identities=6% Similarity=-0.101 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCh
Q 001885 8 AIRVKGIAESKMQSNDFAGARKFALKAQHLYQDL 41 (1000)
Q Consensus 8 A~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~l 41 (1000)
+.....+|..++..|+|..|+..+.++..++|..
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~ 48 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTH 48 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCS
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC
Confidence 4555666777777777777777777777776654
No 147
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=25.60 E-value=4.2e+02 Score=24.84 Aligned_cols=31 Identities=23% Similarity=0.098 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 001885 5 KDEAIRVKGIAESKMQSNDFAGARKFALKAQ 35 (1000)
Q Consensus 5 keEA~ra~~iAe~~l~~~D~~gA~~~a~KA~ 35 (1000)
-.++.+...+|..++..|+++.|+..+.++.
T Consensus 3 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~ 33 (213)
T 1hh8_A 3 LVEAISLWNEGVLAADKKDWKGALDAFSAVQ 33 (213)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHTSS
T ss_pred hHHHHHHHHHHHHHHHhCCHHHHHHHHHHHc
Confidence 3578888999999999999999999999984
No 148
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=25.45 E-value=88 Score=34.30 Aligned_cols=16 Identities=19% Similarity=-0.003 Sum_probs=9.2
Q ss_pred CHHHHHHHHHHHHHHH
Q 001885 4 NKDEAIRVKGIAESKM 19 (1000)
Q Consensus 4 NkeEA~ra~~iAe~~l 19 (1000)
+-++|+.+.+.|.+.+
T Consensus 238 ~~~~Ai~~y~kAl~~~ 253 (370)
T 1ihg_A 238 NWEMAIKKYTKVLRYV 253 (370)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHh
Confidence 3456666666665543
No 149
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=25.25 E-value=1.4e+02 Score=25.10 Aligned_cols=34 Identities=15% Similarity=0.150 Sum_probs=28.4
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHH
Q 001885 11 VKGIAESKMQSNDFAGARKFALKAQHLYQDLENI 44 (1000)
Q Consensus 11 a~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i 44 (1000)
+..+|..++..|+++.|+.++.++..+.|....+
T Consensus 38 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 71 (136)
T 2fo7_A 38 WYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEA 71 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHH
Confidence 4456778889999999999999999999976443
No 150
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=25.17 E-value=77 Score=31.41 Aligned_cols=31 Identities=16% Similarity=0.134 Sum_probs=25.5
Q ss_pred CCHHHHHHHHHHHHhhcCChHHHHHHHHHhh
Q 001885 22 NDFAGARKFALKAQHLYQDLENISQMIMVCD 52 (1000)
Q Consensus 22 ~D~~gA~~~a~KA~~L~P~le~i~q~L~~~d 52 (1000)
++|++|+.+++||..+.|..+.....|..++
T Consensus 105 g~~~eA~~~~~kAl~l~P~~~~y~~al~~~~ 135 (158)
T 1zu2_A 105 HNFDLATQFFQQAVDEQPDNTHYLKSLEMTA 135 (158)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 5899999999999999999876666555443
No 151
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=24.97 E-value=49 Score=30.08 Aligned_cols=35 Identities=6% Similarity=-0.059 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCh
Q 001885 7 EAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDL 41 (1000)
Q Consensus 7 EA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~l 41 (1000)
.+.-...+|..++..|++..|+..+.++..+.|..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~ 41 (186)
T 3as5_A 7 RQVYYRDKGISHAKAGRYSQAVMLLEQVYDADAFD 41 (186)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCC
T ss_pred hhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccC
Confidence 34444445555555555555555555555555543
No 152
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=24.88 E-value=1.3e+02 Score=29.44 Aligned_cols=41 Identities=15% Similarity=-0.088 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHH
Q 001885 6 DEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQ 46 (1000)
Q Consensus 6 eEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q 46 (1000)
..+.-...+|..++..|+++.|+.++.+|..+.|....+..
T Consensus 41 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~ 81 (275)
T 1xnf_A 41 ERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFN 81 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHH
T ss_pred hhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHH
Confidence 44666777888899999999999999999999998644433
No 153
>1vh6_A Flagellar protein FLIS; structural genomics, unknown function; HET: MSE; 2.50A {Bacillus subtilis} SCOP: a.24.19.1
Probab=24.83 E-value=74 Score=31.14 Aligned_cols=36 Identities=19% Similarity=0.396 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCh
Q 001885 6 DEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDL 41 (1000)
Q Consensus 6 eEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~l 41 (1000)
|.|++.+.+|..++..+|++.+-..+.||+.+.-.|
T Consensus 31 dgal~~l~~A~~aie~~d~~~k~~~i~KA~~Ii~eL 66 (145)
T 1vh6_A 31 NGCLKFIRLAAQAIENDDMERKNENLIKAQNIIQEL 66 (145)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 679999999999999999999999999999887444
No 154
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=24.43 E-value=3.4e+02 Score=23.39 Aligned_cols=36 Identities=6% Similarity=0.062 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCh
Q 001885 6 DEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDL 41 (1000)
Q Consensus 6 eEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~l 41 (1000)
..|.-...+|..++..|+++.|+.++.+|..+.+..
T Consensus 7 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~ 42 (164)
T 3ro3_A 7 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEF 42 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh
Confidence 456778889999999999999999999999998764
No 155
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=24.23 E-value=27 Score=30.30 Aligned_cols=32 Identities=16% Similarity=0.525 Sum_probs=25.1
Q ss_pred CcceecCCCCCcceEEeeecccceeccCCCCCceE
Q 001885 185 PTFWTMCPFCTVRYQYYRNVINKSIICQACNKPFV 219 (1000)
Q Consensus 185 ~TFWT~C~~C~~~Yey~r~~ln~~L~C~nC~~~Fv 219 (1000)
......|..|+..++.. ....++|+.|....+
T Consensus 25 ~~v~Y~C~~CG~~~e~~---~~d~irCp~CG~RIL 56 (70)
T 1twf_L 25 ATLKYICAECSSKLSLS---RTDAVRCKDCGHRIL 56 (70)
T ss_dssp CCCCEECSSSCCEECCC---TTSTTCCSSSCCCCC
T ss_pred ceEEEECCCCCCcceeC---CCCCccCCCCCceEe
Confidence 45778999999998876 346789999998533
No 156
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=23.87 E-value=4.6e+02 Score=27.45 Aligned_cols=38 Identities=11% Similarity=-0.026 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChH
Q 001885 5 KDEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLE 42 (1000)
Q Consensus 5 keEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le 42 (1000)
-..+..+..+|..++..|+++.|+.++.+|.++.|...
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~ 82 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTEDL 82 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCH
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccCh
Confidence 46678888999999999999999999999999999853
No 157
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=23.51 E-value=63 Score=27.97 Aligned_cols=33 Identities=21% Similarity=0.081 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCh
Q 001885 9 IRVKGIAESKMQSNDFAGARKFALKAQHLYQDL 41 (1000)
Q Consensus 9 ~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~l 41 (1000)
.-+..+|..++..|+++.|+.++.+|..+.|..
T Consensus 54 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 86 (115)
T 2kat_A 54 VAWKWLGKTLQGQGDRAGARQAWESGLAAAQSR 86 (115)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhcccc
Confidence 345667888999999999999999999998854
No 158
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=22.97 E-value=25 Score=28.39 Aligned_cols=32 Identities=13% Similarity=0.274 Sum_probs=24.1
Q ss_pred ecCCCCCcceEEeeecccceeccCCCCCceEE
Q 001885 189 TMCPFCTVRYQYYRNVINKSIICQACNKPFVA 220 (1000)
Q Consensus 189 T~C~~C~~~Yey~r~~ln~~L~C~nC~~~FvA 220 (1000)
..|-+|++.+...+--+--.++|+.|.=..+.
T Consensus 4 Y~C~rCg~~fs~~el~~lP~IrCpyCGyrii~ 35 (48)
T 4ayb_P 4 YRCGKCWKTFTDEQLKVLPGVRCPYCGYKIIF 35 (48)
T ss_dssp -CCCCTTTTCCCCCSCCCSSSCCTTTCCSCEE
T ss_pred EEeeccCCCccHHHHhhCCCcccCccCcEEEE
Confidence 46999999887766555578999999877553
No 159
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=22.74 E-value=32 Score=32.24 Aligned_cols=31 Identities=19% Similarity=0.469 Sum_probs=24.9
Q ss_pred cceecCCCCCcceEEeeecccceeccCCCCCceE
Q 001885 186 TFWTMCPFCTVRYQYYRNVINKSIICQACNKPFV 219 (1000)
Q Consensus 186 TFWT~C~~C~~~Yey~r~~ln~~L~C~nC~~~Fv 219 (1000)
.+-..|..|+..| +.-++...+|+.|+-..+
T Consensus 65 v~p~~C~~CG~~F---~~~~~kPsrCP~CkSe~I 95 (105)
T 2gmg_A 65 IKPAQCRKCGFVF---KAEINIPSRCPKCKSEWI 95 (105)
T ss_dssp ECCCBBTTTCCBC---CCCSSCCSSCSSSCCCCB
T ss_pred EECcChhhCcCee---cccCCCCCCCcCCCCCcc
Confidence 4456799999887 667788999999987654
No 160
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=22.49 E-value=25 Score=34.98 Aligned_cols=39 Identities=18% Similarity=-0.069 Sum_probs=32.2
Q ss_pred CHHHHHHH----HHHHHHHHhcCCHHHHHHHHHHHHhhcCChH
Q 001885 4 NKDEAIRV----KGIAESKMQSNDFAGARKFALKAQHLYQDLE 42 (1000)
Q Consensus 4 NkeEA~ra----~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le 42 (1000)
|-+.+.-+ ..++..+...|++++|+..+.+|..+.|...
T Consensus 94 ~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~ 136 (159)
T 2hr2_A 94 NQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERK 136 (159)
T ss_dssp TSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred CCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcH
Confidence 33445555 7888999999999999999999999999753
No 161
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=22.28 E-value=2.1e+02 Score=29.68 Aligned_cols=33 Identities=24% Similarity=0.187 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHh------cCCHHHHHHHHHHHHhhc
Q 001885 6 DEAIRVKGIAESKMQ------SNDFAGARKFALKAQHLY 38 (1000)
Q Consensus 6 eEA~ra~~iAe~~l~------~~D~~gA~~~a~KA~~L~ 38 (1000)
+||..+++.|++++. .+|+..|..++.+|-.++
T Consensus 8 ~eA~~~~~~a~k~~~~~~~~~~~~~~~A~~~~~~a~~~~ 46 (307)
T 2ifu_A 8 SEAHEHIAKAEKYLKTSFMKWKPDYDSAASEYAKAAVAF 46 (307)
T ss_dssp HHHHHHHHHHHHHHCCCSSSCSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccccccCCCCCHHHHHHHHHHHHHHH
Confidence 456666666666544 355666666666554444
No 162
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=22.16 E-value=1.6e+02 Score=26.39 Aligned_cols=41 Identities=10% Similarity=-0.027 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHH
Q 001885 8 AIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMI 48 (1000)
Q Consensus 8 A~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L 48 (1000)
+.-...+|..++..|+++.|+.++.++..+.|....+...+
T Consensus 76 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 116 (186)
T 3as5_A 76 VKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRL 116 (186)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHH
Confidence 44566788899999999999999999999999865443333
No 163
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=22.02 E-value=69 Score=35.28 Aligned_cols=43 Identities=19% Similarity=0.146 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHH
Q 001885 6 DEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMI 48 (1000)
Q Consensus 6 eEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L 48 (1000)
+.|..+..+|..++..|+|..|+.++.++.++.|....+...+
T Consensus 23 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 65 (537)
T 3fp2_A 23 AYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNEPVFYSNI 65 (537)
T ss_dssp HHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCCCcHHHHHH
Confidence 3577888899999999999999999999999999765443333
No 164
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=21.67 E-value=1.1e+02 Score=29.82 Aligned_cols=36 Identities=11% Similarity=-0.041 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHH
Q 001885 8 AIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLEN 43 (1000)
Q Consensus 8 A~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~ 43 (1000)
+.-+..+|..++..|++..|+.++.++..+.|....
T Consensus 37 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~ 72 (252)
T 2ho1_A 37 RDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSAD 72 (252)
T ss_dssp HHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCChHH
Confidence 566667777777777777777777777777776543
No 165
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=21.53 E-value=2.2e+02 Score=34.47 Aligned_cols=35 Identities=11% Similarity=0.036 Sum_probs=28.9
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHH
Q 001885 11 VKGIAESKMQSNDFAGARKFALKAQHLYQDLENIS 45 (1000)
Q Consensus 11 a~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~ 45 (1000)
...+|..+++.|++++|+..+++|.++.|....+-
T Consensus 46 ~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~ 80 (723)
T 4gyw_A 46 HSNLASVLQQQGKLQEALMHYKEAIRISPTFADAY 80 (723)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 44567778899999999999999999999875443
No 166
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=21.50 E-value=2.9e+02 Score=31.39 Aligned_cols=42 Identities=12% Similarity=0.098 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHHHHHHH
Q 001885 7 EAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLENISQMI 48 (1000)
Q Consensus 7 EA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~i~q~L 48 (1000)
.+.-...+|..++..|+++.|+.++.+|.++.|....+...+
T Consensus 56 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 97 (568)
T 2vsy_A 56 HPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWL 97 (568)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 355667788888999999999999999999999865443333
No 167
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=21.32 E-value=91 Score=30.76 Aligned_cols=33 Identities=12% Similarity=-0.012 Sum_probs=28.6
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHH
Q 001885 11 VKGIAESKMQSNDFAGARKFALKAQHLYQDLEN 43 (1000)
Q Consensus 11 a~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~ 43 (1000)
...+|..++..|+++.|+..+.++.+++|....
T Consensus 44 ~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~ 76 (225)
T 2yhc_A 44 QLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPN 76 (225)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTT
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCc
Confidence 345677888999999999999999999998754
No 168
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=21.31 E-value=68 Score=27.56 Aligned_cols=32 Identities=3% Similarity=-0.114 Sum_probs=27.2
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCh
Q 001885 10 RVKGIAESKMQSNDFAGARKFALKAQHLYQDL 41 (1000)
Q Consensus 10 ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~l 41 (1000)
-+..+|..++..|+++.|+..+.+|.++.|..
T Consensus 43 a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~ 74 (100)
T 3ma5_A 43 TYYHLGKLYERLDRTDDAIDTYAQGIEVAREE 74 (100)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcC
Confidence 34567888899999999999999999998754
No 169
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=21.14 E-value=1.6e+02 Score=28.12 Aligned_cols=32 Identities=22% Similarity=0.079 Sum_probs=17.2
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCh
Q 001885 10 RVKGIAESKMQSNDFAGARKFALKAQHLYQDL 41 (1000)
Q Consensus 10 ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~l 41 (1000)
-...+|..++..|+++.|+.++.++..+.|..
T Consensus 59 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 90 (243)
T 2q7f_A 59 PYINFANLLSSVNELERALAFYDKALELDSSA 90 (243)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcc
Confidence 33444555555555555555555555555543
No 170
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=21.01 E-value=2.5e+02 Score=29.71 Aligned_cols=35 Identities=17% Similarity=0.099 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCh
Q 001885 7 EAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDL 41 (1000)
Q Consensus 7 EA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~l 41 (1000)
.|.-...+|..++..|+++.|+.++.+|..+++..
T Consensus 142 ~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~ 176 (383)
T 3ulq_A 142 KAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEH 176 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC
Confidence 45556666777777788888888888888777655
No 171
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=20.96 E-value=1.3e+02 Score=32.31 Aligned_cols=39 Identities=10% Similarity=-0.071 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHH
Q 001885 5 KDEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDLEN 43 (1000)
Q Consensus 5 keEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~ 43 (1000)
-..+..+..+|..++..|++..|+.++.++..+.|....
T Consensus 23 p~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~ 61 (450)
T 2y4t_A 23 MADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYI 61 (450)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCccHH
Confidence 355677778888888888888888888888888887543
No 172
>4fx5_A VON willebrand factor type A; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, blood clotting; HET: MSE; 1.73A {Catenulispora acidiphila}
Probab=20.82 E-value=77 Score=36.50 Aligned_cols=37 Identities=14% Similarity=0.014 Sum_probs=32.9
Q ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCC
Q 001885 4 NKDEAIRVKGIAESKMQSNDFAGARKFALKAQHLYQD 40 (1000)
Q Consensus 4 NkeEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~ 40 (1000)
++-++.+++..|..+++.||+++|.+.+..|.++.-.
T Consensus 378 ~~~~~a~~~~~a~~~~~~gd~~~A~~~L~~A~~~~~~ 414 (464)
T 4fx5_A 378 GQAEMAAAIQEGLDAQAAGDLDTATARLGRAMDLAVE 414 (464)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 3567889999999999999999999999999998654
No 173
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=20.72 E-value=1.4e+02 Score=29.17 Aligned_cols=33 Identities=12% Similarity=-0.006 Sum_probs=25.5
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhcCChHH
Q 001885 11 VKGIAESKMQSNDFAGARKFALKAQHLYQDLEN 43 (1000)
Q Consensus 11 a~~iAe~~l~~~D~~gA~~~a~KA~~L~P~le~ 43 (1000)
...+|..++..|+++.|++++.+|..+.|....
T Consensus 80 ~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~ 112 (275)
T 1xnf_A 80 FNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNY 112 (275)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhcCccccH
Confidence 445677788888888888888888888887543
No 174
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=20.57 E-value=3.4e+02 Score=28.06 Aligned_cols=34 Identities=12% Similarity=0.145 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCh
Q 001885 7 EAIRVKGIAESKMQSNDFAGARKFALKAQHLYQDL 41 (1000)
Q Consensus 7 EA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~P~l 41 (1000)
.|.-...+|..+.. |+++.|+.++.+|..++|..
T Consensus 115 ~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~ 148 (307)
T 2ifu_A 115 AAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENE 148 (307)
T ss_dssp HHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhC
Confidence 34555667777766 88888888888888877653
No 175
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=20.37 E-value=1.1e+02 Score=27.25 Aligned_cols=38 Identities=18% Similarity=0.046 Sum_probs=30.0
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhc
Q 001885 1 MDCNKDEAIRVKGIAESKMQSNDFAGARKFALKAQHLY 38 (1000)
Q Consensus 1 Me~NkeEA~ra~~iAe~~l~~~D~~gA~~~a~KA~~L~ 38 (1000)
|+..-..|..+...|...=..|+|..|+.++..|..++
T Consensus 9 ~~~~~~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~l 46 (86)
T 4a5x_A 9 MDPQSTAAATVLKRAVELDSESRYPQALVCYQEGIDLL 46 (86)
T ss_dssp --CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 55555678888888999999999999999998877654
Done!