Query 001887
Match_columns 1000
No_of_seqs 168 out of 225
Neff 5.0
Searched_HMMs 13730
Date Mon Mar 25 03:15:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001887.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/001887hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1b3ua_ a.118.1.2 (A:) Constan 96.3 0.025 1.9E-06 61.8 16.0 133 363-521 415-547 (588)
2 d1u6gc_ a.118.1.2 (C:) Cullin- 96.3 0.2 1.5E-05 59.0 24.8 113 94-217 151-263 (1207)
3 d1b3ua_ a.118.1.2 (A:) Constan 95.7 0.15 1.1E-05 55.4 18.5 303 114-520 280-585 (588)
4 d1qbkb_ a.118.1.1 (B:) Karyoph 95.4 1.2 8.4E-05 51.2 26.0 396 67-521 392-819 (888)
5 d1u6gc_ a.118.1.2 (C:) Cullin- 92.6 1.3 9.8E-05 51.8 18.7 216 281-523 61-282 (1207)
6 d1qgra_ a.118.1.1 (A:) Importi 91.1 13 0.00093 40.6 26.6 166 347-521 506-678 (876)
7 d2vglb_ a.118.1.10 (B:) Adapti 90.9 5.3 0.00039 43.9 20.5 153 279-464 326-478 (579)
8 d1qgra_ a.118.1.1 (A:) Importi 88.0 22 0.0016 38.7 25.6 224 284-520 627-869 (876)
9 d1qbkb_ a.118.1.1 (B:) Karyoph 84.7 36 0.0026 38.2 25.3 334 113-521 393-734 (888)
10 d2bpta1 a.118.1.1 (A:1-861) Im 83.1 35 0.0025 36.7 25.9 164 348-521 500-667 (861)
11 d1q1sc_ a.118.1.1 (C:) Importi 82.5 16 0.0012 36.6 16.8 72 116-192 57-128 (434)
12 d1jdha_ a.118.1.1 (A:) beta-Ca 82.3 24 0.0018 36.7 18.8 71 116-191 18-88 (529)
13 d1q1sc_ a.118.1.1 (C:) Importi 77.0 39 0.0028 33.6 19.3 68 118-192 17-86 (434)
14 d1ibrb_ a.118.1.1 (B:) Importi 68.9 5.4 0.00039 40.0 8.3 111 93-216 346-456 (458)
15 d1wa5b_ a.118.1.1 (B:) Karyoph 64.6 72 0.0053 32.6 16.8 72 116-192 120-191 (503)
16 d2bpta1 a.118.1.1 (A:1-861) Im 63.8 99 0.0072 32.9 31.6 115 93-214 154-273 (861)
17 d1wa5b_ a.118.1.1 (B:) Karyoph 61.5 40 0.0029 34.8 13.9 62 127-192 87-149 (503)
18 d2vglb_ a.118.1.10 (B:) Adapti 49.4 1.7E+02 0.012 31.2 18.5 183 285-501 370-563 (579)
19 d1xqra1 a.118.1.21 (A:87-350) 47.9 52 0.0038 31.2 11.2 92 305-406 145-244 (264)
20 d2vgla_ a.118.1.10 (A:) Adapti 45.2 1.1E+02 0.0078 32.8 14.5 128 286-442 379-506 (584)
21 d1jdha_ a.118.1.1 (A:) beta-Ca 41.9 1.6E+02 0.012 29.9 14.9 87 285-378 247-338 (529)
22 d1jl7a_ a.1.1.2 (A:) Glycera g 41.6 40 0.0029 29.5 8.4 52 75-126 5-72 (147)
23 d1ibrb_ a.118.1.1 (B:) Importi 39.2 1.7E+02 0.012 28.2 25.8 95 422-521 341-435 (458)
24 d2vgla_ a.118.1.10 (A:) Adapti 37.5 1.9E+02 0.014 30.7 14.9 135 287-454 304-443 (584)
25 d1xqra1 a.118.1.21 (A:87-350) 33.4 25 0.0018 33.7 5.9 94 94-193 122-216 (264)
26 d1eo0a_ a.48.3.1 (A:) Transcri 29.4 33 0.0024 28.4 5.0 53 750-802 18-71 (77)
27 d1wa5c_ a.118.1.1 (C:) Exporti 27.9 3.8E+02 0.028 28.9 22.7 98 422-523 571-671 (959)
28 d1szaa_ a.118.9.4 (A:) PCF11 p 27.3 30 0.0022 31.3 4.9 85 31-125 10-95 (144)
29 d1x9fd_ a.1.1.2 (D:) Extracell 26.1 58 0.0042 28.6 6.7 42 72-113 2-47 (140)
30 d1wa5c_ a.118.1.1 (C:) Exporti 22.1 1E+02 0.0074 33.9 9.2 141 70-213 451-601 (959)
31 d1sopa_ g.71.1.1 (A:) Mini-col 20.8 17 0.0013 23.6 1.2 13 9-23 11-23 (26)
32 d1q1fa_ a.1.1.2 (A:) Neuroglob 20.4 2.5E+02 0.018 24.1 11.2 110 76-190 3-141 (148)
No 1
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.31 E-value=0.025 Score=61.81 Aligned_cols=133 Identities=11% Similarity=0.063 Sum_probs=76.8
Q ss_pred CchhhhhHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhcccccCCCCCCccccchHHHHHHHHHHHHHhhcccCCC
Q 001887 363 QPLAQTNIVDIATKLAQNAKLLASVAIIGTINDLIKHLRKCLQNSVELSSSGDGMAKTNADLQYSLENCISWLSKKVGDV 442 (1000)
Q Consensus 363 ~p~~q~~IV~Vlt~La~~~~~~~svsvidvlsdLlrHLRkslq~s~~~s~~g~~~~~~~~~Lq~aL~~CIg~LA~hV~da 442 (1000)
++.+|..+++.+..++..-.... .-+. +..-+.+.+.- .....+.+-.+|++.|+.+.+..
T Consensus 415 ~~~~r~~~~~~l~~l~~~~~~~~---~~~~---l~~~l~~~l~D-------------~~~~VR~~A~~~L~~l~~~~~~~ 475 (588)
T d1b3ua_ 415 KWRVRLAIIEYMPLLAGQLGVEF---FDEK---LNSLCMAWLVD-------------HVYAIREAATSNLKKLVEKFGKE 475 (588)
T ss_dssp SHHHHHHHHHHHHHHHHHHCGGG---CCHH---HHHHHHHGGGC-------------SSHHHHHHHHHHHHHHHHHHCHH
T ss_pred cHHHHHHHHHHHHHHHHHcChHh---HHHH---HHHHHHhhccC-------------CchhHHHHHHHHHHHHHHHhCcH
Confidence 57788888888877765321111 0112 22223333321 13566778888999999988765
Q ss_pred chHHHHHHHHHhhcCCCccchhhhHHHHHHHHHHHhhcCCcccccccCcHHHHHHHHHHhcCCCchhhHHHHHHHHHhh
Q 001887 443 GPILDVMAGVLENMSNNTVVARTTISAVHRTAQIISTIPNISYRNKAFPEALFHQLLLAMAHPDHETRVGAHTVLSVVL 521 (1000)
Q Consensus 443 ~qI~DMmavmLenis~~~~~ar~tvsa~y~ta~i~a~~pn~sy~~kaFP~all~qLL~am~~pD~e~Rl~a~~If~~lL 521 (1000)
.....++..+.+-+......-| .++++-...+...++.- .|.+.++..|+...-.|.|.+|..|.+.+..+.
T Consensus 476 ~~~~~i~~~l~~~~~~~~~~~R--~~~~~~l~~l~~~~~~~-----~~~~~ilp~ll~~~~D~v~nVR~~a~~~l~~i~ 547 (588)
T d1b3ua_ 476 WAHATIIPKVLAMSGDPNYLHR--MTTLFCINVLSEVCGQD-----ITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIG 547 (588)
T ss_dssp HHHHHTHHHHHHTTTCSCHHHH--HHHHHHHHHHHHHHHHH-----HHHHHTHHHHHHGGGCSCHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHcChH-----HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 4444555555444443222223 33444444444222211 123445666888888999999999999998874
No 2
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.27 E-value=0.2 Score=59.04 Aligned_cols=113 Identities=16% Similarity=0.110 Sum_probs=64.4
Q ss_pred HHHHHHHHHHhcccccCcchhhHHHHHHHHHhccCCcceeehhHhHHHHHHhcCCchhhHHhhhhHHHHHHHHhHhcCch
Q 001887 94 VVCIYKKFLSSCKEQMPLFASSLLGIIRTLLEQTRQEEMQILGCGTLVNFIDSQTDGTYMFNLEGLIPKLCQLAQEMGND 173 (1000)
Q Consensus 94 ~l~i~~~Ll~~C~~~l~LFa~s~L~Ii~~LL~qs~~~~l~i~a~~tf~~F~~~q~D~~y~~~ye~fV~~f~~ma~~~~~d 173 (1000)
++.++..|+......+.-+...++..+-..|. +.+..+|..|+..+-..+..-.+.. +..+++.+.+........
T Consensus 151 al~~l~~l~~~~g~~l~~~~~~il~~l~~~l~-~~~~~vR~~A~~~l~~l~~~~~~~~----~~~~~~~ll~~l~~~~~~ 225 (1207)
T d1u6gc_ 151 ALDIMADMLSRQGGLLVNFHPSILTCLLPQLT-SPRLAVRKRTIIALGHLVMSCGNIV----FVDLIEHLLSELSKNDSM 225 (1207)
T ss_dssp HHHHHHHHHHHTCSSCTTTHHHHHHHHGGGGG-CSSHHHHHHHHHHHHHHTTTC--------CTTHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHHhhHhhHHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHCCHHH----HHHHHHHHHHHHccCCCH
Confidence 45566666665554444444444444444444 4566677777777766655433322 344555555444332221
Q ss_pred HHHHHHHHHHHHHHHHhHhhhccccccccccchHHHHHHhhhcc
Q 001887 174 ERALRLRSAGLQVLAYMVKFMGEQSHMSMDFDKIISVTLENFVD 217 (1000)
Q Consensus 174 e~~~rlR~AGLqAL~~vV~~~~e~shis~q~D~IVpvILeNl~~ 217 (1000)
..|..++++|.++++..+ ..+...++.|+|.++..+..
T Consensus 226 ----~~~~~~~~~l~~l~~~~~--~~~~~~l~~i~~~l~~~l~~ 263 (1207)
T d1u6gc_ 226 ----STTRTYIQCIAAISRQAG--HRIGEYLEKIIPLVVKFCNV 263 (1207)
T ss_dssp ----CSCTTHHHHHHHHHHHSS--GGGTTSCTTHHHHHHHHHSS
T ss_pred ----HHHHHHHHHHHHHHHHcc--hhhHHHHHHHHHHHHHHhcC
Confidence 124457888888887665 23456689999999988874
No 3
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.66 E-value=0.15 Score=55.40 Aligned_cols=303 Identities=14% Similarity=0.149 Sum_probs=148.5
Q ss_pred hhHHHHHHHHHhccCCcceeehhHhHHHHHHhcCC-chhhHHhhhhHHHHHHHHhHhcCchHHHHHHHHHHHHHHHHhHh
Q 001887 114 SSLLGIIRTLLEQTRQEEMQILGCGTLVNFIDSQT-DGTYMFNLEGLIPKLCQLAQEMGNDERALRLRSAGLQVLAYMVK 192 (1000)
Q Consensus 114 ~s~L~Ii~~LL~qs~~~~l~i~a~~tf~~F~~~q~-D~~y~~~ye~fV~~f~~ma~~~~~de~~~rlR~AGLqAL~~vV~ 192 (1000)
..++.++..++. ..+++++..++..+..++..-. +.......+.+++.+..+..... ...|.+...+|..+..
T Consensus 280 ~~l~~~l~~ll~-d~~~~vr~~a~~~l~~~~~~l~~~~~~~~~~~~i~~~l~~~~~d~~-----~~vr~~~~~~l~~~~~ 353 (588)
T d1b3ua_ 280 TDLVPAFQNLMK-DCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDAN-----QHVKSALASVIMGLSP 353 (588)
T ss_dssp HTHHHHHHHHHT-CSSHHHHHHHHHHHHHHHHTSCTTTHHHHHHHTHHHHHHHHHTCSC-----HHHHHHHHTTGGGGHH
T ss_pred hhhhHHHHHHHh-ccchHHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHhhcCCC-----hHHHHHHHHHHhhhhh
Confidence 345566666777 5677888888888887776432 22333345677777777765322 2456666666666665
Q ss_pred hhccccccccccchHHHHHHhhhccccCCCCCCccCccCCcchhhhhhhhcccccCCCCCCcccccccccccCCCCCCCC
Q 001887 193 FMGEQSHMSMDFDKIISVTLENFVDLQMKPANGKEGRQHSQSEDQWVQGLQNEEDNDSSFPDMSKKVSSLKDSMINPGPD 272 (1000)
Q Consensus 193 ~~~e~shis~q~D~IVpvILeNl~~~~~~~~d~~~~~~~~~~~~~~v~e~~~~E~~~~~~~~~~~r~ps~~~~~~~~~~~ 272 (1000)
..+.... .+.++|.++..+.+. +
T Consensus 354 ~~~~~~~----~~~l~p~l~~~l~d~-----~------------------------------------------------ 376 (588)
T d1b3ua_ 354 ILGKDNT----IEHLLPLFLAQLKDE-----C------------------------------------------------ 376 (588)
T ss_dssp HHCHHHH----HHHTHHHHHHHHTCS-----C------------------------------------------------
T ss_pred ccchhHH----HHHHHHHHHHHHHhh-----h------------------------------------------------
Confidence 5443222 456677776665521 0
Q ss_pred CCCCCCCChHHHHHHHHHHHHHhhhhcchHHHHhhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhhcCCCcchHHHHHH
Q 001887 273 PTMDTSKSPSYWSRVCLDNMARLAKETTTVRRVLEPLFQIFDAENHWSTETGVACSVLLYLQSLLEESGENSHLLLCNLV 352 (1000)
Q Consensus 273 ~~~e~~e~p~vlA~~CLr~l~~~A~e~ttvr~VLepvf~~lD~~~~Wsp~~gfAi~vf~~iq~l~e~~~Q~~~lvLs~Lv 352 (1000)
++...-+..|+..+..... ...+...+-|.+..+.....|.. ..-+..++..+...+. .......+...++
T Consensus 377 ------~~v~~~~~~~l~~~~~~~~-~~~~~~~ll~~l~~~~~d~~~~~-r~~~~~~l~~l~~~~~-~~~~~~~l~~~l~ 447 (588)
T d1b3ua_ 377 ------PEVRLNIISNLDCVNEVIG-IRQLSQSLLPAIVELAEDAKWRV-RLAIIEYMPLLAGQLG-VEFFDEKLNSLCM 447 (588)
T ss_dssp ------HHHHHHHHTTCHHHHHHSC-HHHHHHHHHHHHHHHHTCSSHHH-HHHHHHHHHHHHHHHC-GGGCCHHHHHHHH
T ss_pred ------hhhhhHHHHHHHHHHhhcc-hhhhhhHHHHHHHHHHhcccHHH-HHHHHHHHHHHHHHcC-hHhHHHHHHHHHH
Confidence 0111112233333332211 11122222233333334456766 3334444444433221 1222234555566
Q ss_pred HhhhccCCCCCchhhhhHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhcccccCCCCCCccccchHHHHHHHHHHH
Q 001887 353 KHLDHKSVAKQPLAQTNIVDIATKLAQNAKLLASVAIIGTINDLIKHLRKCLQNSVELSSSGDGMAKTNADLQYSLENCI 432 (1000)
Q Consensus 353 ~HLd~k~v~~~p~~q~~IV~Vlt~La~~~~~~~svsvidvlsdLlrHLRkslq~s~~~s~~g~~~~~~~~~Lq~aL~~CI 432 (1000)
..|... ...+|..-++.+..+++.-. . =.+...++..+...+... +-..+.+...|+
T Consensus 448 ~~l~D~----~~~VR~~A~~~L~~l~~~~~----~--~~~~~~i~~~l~~~~~~~-------------~~~~R~~~~~~l 504 (588)
T d1b3ua_ 448 AWLVDH----VYAIREAATSNLKKLVEKFG----K--EWAHATIIPKVLAMSGDP-------------NYLHRMTTLFCI 504 (588)
T ss_dssp HGGGCS----SHHHHHHHHHHHHHHHHHHC----H--HHHHHHTHHHHHHTTTCS-------------CHHHHHHHHHHH
T ss_pred hhccCC----chhHHHHHHHHHHHHHHHhC----c--HHHHHHHHHHHHHHhcCC-------------CHHHHHHHHHHH
Confidence 666442 36677776666666664321 1 122334444444433211 234455667788
Q ss_pred HHhhcccCCCchHHHHHHHHHhhcCCCccc-hhhhHHHHHHHHHHHhhcCCcccccccCcHHHHHHHHH-HhcCCCchhh
Q 001887 433 SWLSKKVGDVGPILDVMAGVLENMSNNTVV-ARTTISAVHRTAQIISTIPNISYRNKAFPEALFHQLLL-AMAHPDHETR 510 (1000)
Q Consensus 433 g~LA~hV~da~qI~DMmavmLenis~~~~~-ar~tvsa~y~ta~i~a~~pn~sy~~kaFP~all~qLL~-am~~pD~e~R 510 (1000)
+.++...+.-.-...++-.++..+. -+++ -|..+ .-...++...+++ +.+- ..+.++|. .+-.+|.++|
T Consensus 505 ~~l~~~~~~~~~~~~ilp~ll~~~~-D~v~nVR~~a--~~~l~~i~~~~~~-----~~~~-~~i~~~l~~L~~D~d~dVr 575 (588)
T d1b3ua_ 505 NVLSEVCGQDITTKHMLPTVLRMAG-DPVANVRFNV--AKSLQKIGPILDN-----STLQ-SEVKPILEKLTQDQDVDVK 575 (588)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHGGG-CSCHHHHHHH--HHHHHHHGGGSCH-----HHHH-HHHHHHHHHHTTCSSHHHH
T ss_pred HHHHHHcChHHHHHHHHHHHHHHcC-CCCHHHHHHH--HHHHHHHHHHcCc-----HhHH-HHHHHHHHHHcCCCCHHHH
Confidence 8888766543223445555544443 3432 23321 1112234311111 1111 11233444 4458999999
Q ss_pred HHHHHHHHHh
Q 001887 511 VGAHTVLSVV 520 (1000)
Q Consensus 511 l~a~~If~~l 520 (1000)
-.|.+.+.+|
T Consensus 576 ~~A~~al~~l 585 (588)
T d1b3ua_ 576 YFAQEALTVL 585 (588)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 9999999886
No 4
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.42 E-value=1.2 Score=51.16 Aligned_cols=396 Identities=13% Similarity=0.166 Sum_probs=200.7
Q ss_pred ChhhhHHHHHHHHHHHHhhhcCCceeeHHHHHHHHHHhcccccCcchhhHHHHHHHHHhccCCcceeehhHhHHHHHHhc
Q 001887 67 RIPKITTLLEQRCYKDLRNENFGSVKVVVCIYKKFLSSCKEQMPLFASSLLGIIRTLLEQTRQEEMQILGCGTLVNFIDS 146 (1000)
Q Consensus 67 KL~KIg~yLekR~~kDl~r~r~G~V~V~l~i~~~Ll~~C~~~l~LFa~s~L~Ii~~LL~qs~~~~l~i~a~~tf~~F~~~ 146 (1000)
-++.+-.+|.+.+..+-|+.|.+ ++.++..+.+.|.+.+.-+.+.++..+-..|. ..++.+|..+|.++-.|+..
T Consensus 392 il~~~l~~l~~~l~s~~~~~rea----a~~alg~i~eg~~~~~~~~l~~li~~l~~~l~-d~~~~Vr~~a~~~l~~~~~~ 466 (888)
T d1qbkb_ 392 LLPHILPLLKELLFHHEWVVKES----GILVLGAIAEGCMQGMIPYLPELIPHLIQCLS-DKKALVRSITCWTLSRYAHW 466 (888)
T ss_dssp SHHHHHHHHHHTTTSSSHHHHHH----HHHHHHHHTTTSHHHHTTTHHHHHHHHHHHTT-SSCHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHhhccchhHHHHH----HHHHhhhhhhhHHHHhcccchhhhHHHHHhcc-CCCHHHHHHHHHHHHHHHHH
Confidence 46788888888877766766654 56678888889998887788888888888887 67888899999998887753
Q ss_pred --CCch-hhHHhhhhHHHHHHHHhHhcCchHHHHHHHHHHHHHHHHhHhhhccccccccccchHHHHHHhhhccccCCCC
Q 001887 147 --QTDG-TYMFNLEGLIPKLCQLAQEMGNDERALRLRSAGLQVLAYMVKFMGEQSHMSMDFDKIISVTLENFVDLQMKPA 223 (1000)
Q Consensus 147 --q~D~-~y~~~ye~fV~~f~~ma~~~~~de~~~rlR~AGLqAL~~vV~~~~e~shis~q~D~IVpvILeNl~~~~~~~~ 223 (1000)
..+. .| +..+++.+........ .+.|.++..||..++...+ .++...++.|++.++.-+...+ .
T Consensus 467 ~~~~~~~~~---~~~~l~~ll~~l~d~~-----~~V~~~a~~al~~l~~~~~--~~l~p~~~~il~~l~~~l~~~~---~ 533 (888)
T d1qbkb_ 467 VVSQPPDTY---LKPLMTELLKRILDSN-----KRVQEAACSAFATLEEEAC--TELVPYLAYILDTLVFAFSKYQ---H 533 (888)
T ss_dssp HHSSCHHHH---TTTHHHHHHHHHSSSC-----HHHHHHHHHHHHHHHHHHT--TSSGGGHHHHHHHHHHHTTTCC---H
T ss_pred hhhhhhhhh---hhhhHHHHHHHhcCCC-----HHHHHHHHHHHHHHHHHhh--hhhhhHHHHHHHHHHHHHhhhh---H
Confidence 2222 33 4556666655543222 3678888999998887654 2344556777777766555321 1
Q ss_pred CCccCccCCcchhhhhhhhcccccCCCCCCccccc-ccccccCCCCCCCCCCCCCCCChHHH-HHHHHHHHHHhhh-hcc
Q 001887 224 NGKEGRQHSQSEDQWVQGLQNEEDNDSSFPDMSKK-VSSLKDSMINPGPDPTMDTSKSPSYW-SRVCLDNMARLAK-ETT 300 (1000)
Q Consensus 224 d~~~~~~~~~~~~~~v~e~~~~E~~~~~~~~~~~r-~ps~~~~~~~~~~~~~~e~~e~p~vl-A~~CLr~l~~~A~-e~t 300 (1000)
+.. .....-+..+..+-+..-..+..... .|..... ...+ ..+++..+ ...||-.++.... .+.
T Consensus 534 ~~~------~~~~~al~~l~~~~~~~~~~~~~~~~l~~~l~~~----~~~~---~~~~~~~~~~le~l~~i~~~~~~~~~ 600 (888)
T d1qbkb_ 534 KNL------LILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQK----WNML---KDEDKDLFPLLECLSSVATALQSGFL 600 (888)
T ss_dssp HHH------HHHHHHHHHHHHHHGGGGCSHHHHHHHHHHHHHH----HTTS---CTTCTTHHHHHHHHHHHHHHSTTTTH
T ss_pred HHH------HHHHHHHHHHHHhhhccccchHHHHHHHHHHHHH----HHhc---ccchHHHHHHHHHHHHHHHHhHHHHh
Confidence 000 00000111111100000000000000 0000000 0000 01122222 4578877764321 111
Q ss_pred h-H----HHHhh--------hhhhhccCCCCCCCCcchHHHHHHHHHHHHhhcCCC--cch----HHHHHHHhhhccCCC
Q 001887 301 T-V----RRVLE--------PLFQIFDAENHWSTETGVACSVLLYLQSLLEESGEN--SHL----LLCNLVKHLDHKSVA 361 (1000)
Q Consensus 301 t-v----r~VLe--------pvf~~lD~~~~Wsp~~gfAi~vf~~iq~l~e~~~Q~--~~l----vLs~Lv~HLd~k~v~ 361 (1000)
. . .+++. .+...........+...+....+..+-.+++.-+.+ .++ ++..+..-+..+
T Consensus 601 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~l~~~~~~~~~~~~l~~~l~~~l~~~--- 677 (888)
T d1qbkb_ 601 PYCEPVYQRCVNLVQKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDK--- 677 (888)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTTSCCCCTHHHHHHHHHHHHHHHHHTTTTHHHHHTSCHHHHHHHHHTCS---
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHhhhhhhhhhhHhhHHHHHHHHhCCC---
Confidence 0 1 11111 111222333444455566655555444443321211 111 233333444332
Q ss_pred CCchhhhhHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhcccccCCCCCCccccchHHHHHHHHHHHHHhhccc--
Q 001887 362 KQPLAQTNIVDIATKLAQNAKLLASVAIIGTINDLIKHLRKCLQNSVELSSSGDGMAKTNADLQYSLENCISWLSKKV-- 439 (1000)
Q Consensus 362 ~~p~~q~~IV~Vlt~La~~~~~~~svsvidvlsdLlrHLRkslq~s~~~s~~g~~~~~~~~~Lq~aL~~CIg~LA~hV-- 439 (1000)
++.+|...+.++..+++......... +..++..|.+.+... ..........|+|+++.+.
T Consensus 678 -~~~vr~~a~~llgdl~~~~~~~~~~~----l~~~~~~l~~~L~~~-------------~~~v~~~a~~~ig~ia~~~~~ 739 (888)
T d1qbkb_ 678 -MPEVRQSSFALLGDLTKACFQHVKPC----IADFMPILGTNLNPE-------------FISVCNNATWAIGEISIQMGI 739 (888)
T ss_dssp -SHHHHHHHHHHHHHHHHHCGGGTGGG----HHHHHHHHHHTCCGG-------------GHHHHHHHHHHHHHHHHHTGG
T ss_pred -ChHHHHHHHHHHHHHHHhhhHHHHHH----HHHHHHHHHHHhCcC-------------CHHHHHHHHHHHHHHHHHHHH
Confidence 47778777777777776544433332 333444444444321 2345667778999999886
Q ss_pred ---CCCchHHHHHHHHHhhcCCCcc-chhhhHHHHHHHHHHHhhcCCcccccccCcHHHHHHHHHHhcC-CCchhhHHHH
Q 001887 440 ---GDVGPILDVMAGVLENMSNNTV-VARTTISAVHRTAQIISTIPNISYRNKAFPEALFHQLLLAMAH-PDHETRVGAH 514 (1000)
Q Consensus 440 ---~da~qI~DMmavmLenis~~~~-~ar~tvsa~y~ta~i~a~~pn~sy~~kaFP~all~qLL~am~~-pD~e~Rl~a~ 514 (1000)
+|.++|...+-.++.+ ++++. +....+.++ +.+....|+.- ..+-+.|+.+++.+|-. .|.+.+-.|.
T Consensus 740 ~~~py~~~il~~L~~il~~-~~~~~~v~~n~~~~l---grl~~~~p~~~---~~~l~~~~~~~~~~l~~~~d~~ek~~~~ 812 (888)
T d1qbkb_ 740 EMQPYIPMVLHQLVEIINR-PNTPKTLLENTAITI---GRLGYVCPQEV---APMLQQFIRPWCTSLRNIRDNEEKDSAF 812 (888)
T ss_dssp GGGGGSHHHHHHHHHHHTC-TTCCHHHHHHHHHHH---HHHHHHCHHHH---GGGGGGTHHHHHHHHTTSCCSHHHHHHH
T ss_pred HhhhhHHHHHHHHHHHHcC-CCccHHHHHHHHHHH---HHHHHHCHHHH---HhhHHHHHHHHHHHhccCCCcHHHHHHH
Confidence 4555555555555432 22221 111222222 33443333310 11234567778877754 5777777787
Q ss_pred HHHHHhh
Q 001887 515 TVLSVVL 521 (1000)
Q Consensus 515 ~If~~lL 521 (1000)
+-|-.++
T Consensus 813 ~g~~~~i 819 (888)
T d1qbkb_ 813 RGICTMI 819 (888)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777766
No 5
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.57 E-value=1.3 Score=51.75 Aligned_cols=216 Identities=13% Similarity=0.114 Sum_probs=119.1
Q ss_pred hHHHHHHHHHHHHHhhhhcchHHHHhhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhhcCC---CcchHHHHHHHhhhc
Q 001887 281 PSYWSRVCLDNMARLAKETTTVRRVLEPLFQIFDAENHWSTETGVACSVLLYLQSLLEESGE---NSHLLLCNLVKHLDH 357 (1000)
Q Consensus 281 p~vlA~~CLr~l~~~A~e~ttvr~VLepvf~~lD~~~~Wsp~~gfAi~vf~~iq~l~e~~~Q---~~~lvLs~Lv~HLd~ 357 (1000)
...+|..||..|+...+ ...+..+++.++..+-..+ |.. ...+..+++.+...+..... ....++..++..|-.
T Consensus 61 Vq~~A~k~l~~l~~~~~-~~~~~~l~~~L~~~l~~~~-~~~-r~~~~~~L~~i~~~l~~~~~~~~~~~~~~~~l~~~l~~ 137 (1207)
T d1u6gc_ 61 VQNLAVKCLGPLVSKVK-EYQVETIVDTLCTNMLSDK-EQL-RDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTS 137 (1207)
T ss_dssp HHHHHHHHHHHHHTTSC-HHHHHHHHHHHHHHTTCSS-SHH-HHHHHHHHHHHHHHCC-----CCTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCc-HhhHHHHHHHHHHHhcCCc-hhh-hHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHH
Confidence 45578999999987766 4457778888777764322 222 45565666666543321111 122344444455422
Q ss_pred -cCCCCCchhhhhHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhcccccCCCCCCccccchHHHHHHHHHHHHHhh
Q 001887 358 -KSVAKQPLAQTNIVDIATKLAQNAKLLASVAIIGTINDLIKHLRKCLQNSVELSSSGDGMAKTNADLQYSLENCISWLS 436 (1000)
Q Consensus 358 -k~v~~~p~~q~~IV~Vlt~La~~~~~~~svsvidvlsdLlrHLRkslq~s~~~s~~g~~~~~~~~~Lq~aL~~CIg~LA 436 (1000)
....+++.++...++++..++..-...... ....++..|...+..+ +...+.+-..||+.++
T Consensus 138 ~~~~~~~~~v~~~al~~l~~l~~~~g~~l~~----~~~~il~~l~~~l~~~-------------~~~vR~~A~~~l~~l~ 200 (1207)
T d1u6gc_ 138 AIAKQEDVSVQLEALDIMADMLSRQGGLLVN----FHPSILTCLLPQLTSP-------------RLAVRKRTIIALGHLV 200 (1207)
T ss_dssp HHSCCSCHHHHHHHHHHHHHHHHHTCSSCTT----THHHHHHHHGGGGGCS-------------SHHHHHHHHHHHHHHT
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHhhHhhHH----HHHHHHHHHHHHhCCC-------------CHHHHHHHHHHHHHHH
Confidence 112346778888888888777543332222 2233444444433221 4567888899999999
Q ss_pred cccCCCchHHHHHHHHHhhcCCCc--cchhhhHHHHHHHHHHHhhcCCcccccccCcHHHHHHHHHHhcCCCchhhHHHH
Q 001887 437 KKVGDVGPILDVMAGVLENMSNNT--VVARTTISAVHRTAQIISTIPNISYRNKAFPEALFHQLLLAMAHPDHETRVGAH 514 (1000)
Q Consensus 437 ~hV~da~qI~DMmavmLenis~~~--~~ar~tvsa~y~ta~i~a~~pn~sy~~kaFP~all~qLL~am~~pD~e~Rl~a~ 514 (1000)
...++.. ..+++..++..+.+.. ...|+.+.+ .+.++...|.. -..+-+.++..++..+-..|++.|-.+.
T Consensus 201 ~~~~~~~-~~~~~~~ll~~l~~~~~~~~~~~~~~~---l~~l~~~~~~~---~~~~l~~i~~~l~~~l~~~~~~~r~~al 273 (1207)
T d1u6gc_ 201 MSCGNIV-FVDLIEHLLSELSKNDSMSTTRTYIQC---IAAISRQAGHR---IGEYLEKIIPLVVKFCNVDDDELREYCI 273 (1207)
T ss_dssp TTC-----CTTHHHHHHHHHHHTCSSCSCTTHHHH---HHHHHHHSSGG---GTTSCTTHHHHHHHHHSSCCTTTHHHHH
T ss_pred HHCCHHH-HHHHHHHHHHHHccCCCHHHHHHHHHH---HHHHHHHcchh---hHHHHHHHHHHHHHHhcCccHHHHHHHH
Confidence 9886532 2233444444443221 122332222 22333333321 1122244566688899999999999999
Q ss_pred HHHHHhhcC
Q 001887 515 TVLSVVLMP 523 (1000)
Q Consensus 515 ~If~~lL~p 523 (1000)
+.|..++..
T Consensus 274 ~~l~~l~~~ 282 (1207)
T d1u6gc_ 274 QAFESFVRR 282 (1207)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHh
Confidence 999998755
No 6
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.13 E-value=13 Score=40.65 Aligned_cols=166 Identities=13% Similarity=0.125 Sum_probs=83.8
Q ss_pred HHHHHHHhhhccCCCCCchhhhhHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhcccccCCCCCCccccchHHHHH
Q 001887 347 LLCNLVKHLDHKSVAKQPLAQTNIVDIATKLAQNAKLLASVAIIGTINDLIKHLRKCLQNSVELSSSGDGMAKTNADLQY 426 (1000)
Q Consensus 347 vLs~Lv~HLd~k~v~~~p~~q~~IV~Vlt~La~~~~~~~svsvidvlsdLlrHLRkslq~s~~~s~~g~~~~~~~~~Lq~ 426 (1000)
++..+++.++... .....++...++.+..+...........+...+..++..+...+.......... .......++.
T Consensus 506 i~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~--~~~~~~~~~~ 582 (876)
T d1qgra_ 506 IVQKLLETTDRPD-GHQNNLRSSAYESLMEIVKNSAKDCYPAVQKTTLVIMERLQQVLQMESHIQSTS--DRIQFNDLQS 582 (876)
T ss_dssp HHHHHHHHTTSCS-SCSTTHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHHHHHHHHHTTTTSCCSTT--HHHHHHHHHH
T ss_pred HHHHHHHHHHhhc-cccHhHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchh--hhHHHHHHHH
Confidence 4445555565522 334556666677777776665555555566777777777777775543221111 1112345667
Q ss_pred HHHHHHHHhhcccCC------CchHHHHHHHHHhhcCCCccchhhhHHHHHHHHHHHhhcCCcccccccCcHHHHHHHHH
Q 001887 427 SLENCISWLSKKVGD------VGPILDVMAGVLENMSNNTVVARTTISAVHRTAQIISTIPNISYRNKAFPEALFHQLLL 500 (1000)
Q Consensus 427 aL~~CIg~LA~hV~d------a~qI~DMmavmLenis~~~~~ar~tvsa~y~ta~i~a~~pn~sy~~kaFP~all~qLL~ 500 (1000)
.+..++..+..+++. .+++...+..+++....... ....+....+.++...+.. -..|-+.++..|+.
T Consensus 583 ~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~~l~~~~~~~~---~~~~~l~~l~~l~~~~~~~---~~~~l~~ii~~l~~ 656 (876)
T d1qgra_ 583 LLCATLQNVLRKVQHQDALQISDVVMASLLRMFQSTAGSGG---VQEDALMAVSTLVEVLGGE---FLKYMEAFKPFLGI 656 (876)
T ss_dssp HHHHHHHHHHTTSCHHHHHTTHHHHHHHHHHHC-----CCH---HHHHHHHHHHHHHHHHGGG---GGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcchhhhhhhHHHHHHHHHHHHhcCCCCcc---hHHHHHHHHHHHHHHcchh---hHHHHHHHHHHHHH
Confidence 777888888777753 33344444334333222111 1111122222233222211 02233455555555
Q ss_pred Hhc-CCCchhhHHHHHHHHHhh
Q 001887 501 AMA-HPDHETRVGAHTVLSVVL 521 (1000)
Q Consensus 501 am~-~pD~e~Rl~a~~If~~lL 521 (1000)
.+- ..++++|..|..++..+.
T Consensus 657 ~l~~~~~~~v~~~a~~~l~~l~ 678 (876)
T d1qgra_ 657 GLKNYAEYQVCLAAVGLVGDLC 678 (876)
T ss_dssp HHHHCTTHHHHHHHHHHHHHHH
T ss_pred HHhCCCcHHHHHHHHHHHHHHH
Confidence 543 345789999888877654
No 7
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.90 E-value=5.3 Score=43.87 Aligned_cols=153 Identities=12% Similarity=0.175 Sum_probs=88.0
Q ss_pred CChHHHHHHHHHHHHHhhhhcchHHHHhhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhhcCCCcchHHHHHHHhhhcc
Q 001887 279 KSPSYWSRVCLDNMARLAKETTTVRRVLEPLFQIFDAENHWSTETGVACSVLLYLQSLLEESGENSHLLLCNLVKHLDHK 358 (1000)
Q Consensus 279 e~p~vlA~~CLr~l~~~A~e~ttvr~VLepvf~~lD~~~~Wsp~~gfAi~vf~~iq~l~e~~~Q~~~lvLs~Lv~HLd~k 358 (1000)
.||.......|.-+...+. ..++..|+.-+..|....+ ..|.....+.+-.+..+-....--++..+++-|..+
T Consensus 326 ~d~~~ik~~~L~iL~~l~~-~~n~~~Il~eL~~y~~~~d-----~~~~~~ai~aI~~la~~~~~~~~~~i~~Ll~ll~~~ 399 (579)
T d2vglb_ 326 NDPIYVKLEKLDIMIRLAS-QANIAQVLAELKEYATEVD-----VDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTK 399 (579)
T ss_dssp TSCHHHHHHHHHHHHHTCC-SSTHHHHHHHHHHHTTSSC-----HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTC
T ss_pred CChHHHHHHHHHHHHHHcC-hhhHHHHHHHHHHHhhcCC-----HHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHhCC
Confidence 3566666777777777776 6778888888888875433 344444444443333222222334566666666553
Q ss_pred CCCCCchhhhhHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhcccccCCCCCCccccchHHHHHHHHHHHHHhhcc
Q 001887 359 SVAKQPLAQTNIVDIATKLAQNAKLLASVAIIGTINDLIKHLRKCLQNSVELSSSGDGMAKTNADLQYSLENCISWLSKK 438 (1000)
Q Consensus 359 ~v~~~p~~q~~IV~Vlt~La~~~~~~~svsvidvlsdLlrHLRkslq~s~~~s~~g~~~~~~~~~Lq~aL~~CIg~LA~h 438 (1000)
...+...++.++..+.+.....-. .++..|+++ ++.- .+.....++.-+||+++++
T Consensus 400 ----~~~v~~e~i~~i~~i~~~~p~~~~----~ii~~L~~~----l~~~------------~~~~~~~~~iwilGEy~~~ 455 (579)
T d2vglb_ 400 ----VNYVVQEAIVVIRDIFRKYPNKYE----SIIATLCEN----LDSL------------DEPDARAAMIWIVGEYAER 455 (579)
T ss_dssp ----CHHHHHHHHHHHHHHHHHSCSSCC----TTHHHHHHT----TTTC------------CSHHHHHHHHHHHHTTCTT
T ss_pred ----chhHHHHHHHHHHHHHHhChHHHH----HHHHHHHHH----HHhc------------CcHHHHHHHHHHHhCcccc
Confidence 244555555555555433222110 122222222 2110 1456678889999999999
Q ss_pred cCCCchHHHHHHHHHhhcCCCccchh
Q 001887 439 VGDVGPILDVMAGVLENMSNNTVVAR 464 (1000)
Q Consensus 439 V~da~qI~DMmavmLenis~~~~~ar 464 (1000)
+.+++ |++..+++++..-+...|
T Consensus 456 i~~~~---~ll~~l~~~f~~e~~~vq 478 (579)
T d2vglb_ 456 IDNAD---ELLESFLEGFHDESTQVQ 478 (579)
T ss_dssp CTTHH---HHHHHHSTTCSSSCHHHH
T ss_pred cccHH---HHHHHHHHhhhhCCHHHH
Confidence 98754 667778888877654444
No 8
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.95 E-value=22 Score=38.74 Aligned_cols=224 Identities=10% Similarity=0.077 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHhhhh-cc-hHHHHhhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhhc-CCCcchHHHHHHHhhhccCC
Q 001887 284 WSRVCLDNMARLAKE-TT-TVRRVLEPLFQIFDAENHWSTETGVACSVLLYLQSLLEES-GENSHLLLCNLVKHLDHKSV 360 (1000)
Q Consensus 284 lA~~CLr~l~~~A~e-~t-tvr~VLepvf~~lD~~~~Wsp~~gfAi~vf~~iq~l~e~~-~Q~~~lvLs~Lv~HLd~k~v 360 (1000)
.+..|+..++....+ .. -+..++..++..+.+...|.. ..-|+.++..+...+... .++.--++..+++.|...+.
T Consensus 627 ~~l~~l~~l~~~~~~~~~~~l~~ii~~l~~~l~~~~~~~v-~~~a~~~l~~l~~~~~~~~~~~~~~i~~~l~~~l~~~~~ 705 (876)
T d1qgra_ 627 DALMAVSTLVEVLGGEFLKYMEAFKPFLGIGLKNYAEYQV-CLAAVGLVGDLCRALQSNIIPFCDEVMQLLLENLGNENV 705 (876)
T ss_dssp HHHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHCTTHHH-HHHHHHHHHHHHHHHGGGGHHHHHHHHHHHHHHHTCTTS
T ss_pred HHHHHHHHHHHHcchhhHHHHHHHHHHHHHHHhCCCcHHH-HHHHHHHHHHHHHHhHHhhhhhHHHHHHHHHHHhCCccC
Confidence 455666666654332 22 266788888888876654433 455666776665543211 11233566777777765433
Q ss_pred CCCchhhhhHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhcccccCCCCCCccccchHHHHHHHHHHHHHhhcccC
Q 001887 361 AKQPLAQTNIVDIATKLAQNAKLLASVAIIGTINDLIKHLRKCLQNSVELSSSGDGMAKTNADLQYSLENCISWLSKKVG 440 (1000)
Q Consensus 361 ~~~p~~q~~IV~Vlt~La~~~~~~~svsvidvlsdLlrHLRkslq~s~~~s~~g~~~~~~~~~Lq~aL~~CIg~LA~hV~ 440 (1000)
++.++..++..+..++...+.. ....+..++..|.+.++...+..+. +..+.-..+++++.+|...+-..+.
T Consensus 706 --~~~~k~~~~~~i~~i~~~~~~~----~~~yl~~~l~~l~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~i~~~~~ 777 (876)
T d1qgra_ 706 --HRSVKPQILSVFGDIALAIGGE----FKKYLEVVLNTLQQASQAQVDKSDY--DMVDYLNELRESCLEAYTGIVQGLK 777 (876)
T ss_dssp --CGGGHHHHHHHHHHHHHHHGGG----GGGGHHHHHHHHHHHHTCCCCTTCH--HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHHHHHhHh----hHHHHHHHHHHHHHHHhcccCccch--hHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5678889999888777543322 1234455566666666543322111 1223345677888888766532211
Q ss_pred C-----------CchHHHHHHHHHhhcCCCcc----chhhhHHHHHHHHHHHhhcCCcccccccCcHHHHHHHHH-HhcC
Q 001887 441 D-----------VGPILDVMAGVLENMSNNTV----VARTTISAVHRTAQIISTIPNISYRNKAFPEALFHQLLL-AMAH 504 (1000)
Q Consensus 441 d-----------a~qI~DMmavmLenis~~~~----~ar~tvsa~y~ta~i~a~~pn~sy~~kaFP~all~qLL~-am~~ 504 (1000)
+ ..+..+-+..++..+...+. +-|..++. .+.++..+++- ..+..+...+..+||. ++--
T Consensus 778 ~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~---i~~l~~~~g~~-~~~~~~~~~~v~~ll~~~~~s 853 (876)
T d1qgra_ 778 GDQENVHPDVMLVQPRVEFILSFIDHIAGDEDHTDGVVACAAGL---IGDLCTAFGKD-VLKLVEARPMIHELLTEGRRS 853 (876)
T ss_dssp CSSSSCCGGGGGSGGGHHHHHHHHHHHHTCSCCCHHHHHHHHHH---HHHHHHHHCTH-HHHHHHTSHHHHHHHHHHHHC
T ss_pred cccccchhhHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHH---HHHHHHHHHHH-HHHHHhcChHHHHHHHHHHhC
Confidence 1 11222223333333333222 22222221 22333222210 0001112234456665 6788
Q ss_pred CCchhhHHHHHHHHHh
Q 001887 505 PDHETRVGAHTVLSVV 520 (1000)
Q Consensus 505 pD~e~Rl~a~~If~~l 520 (1000)
+|+++|-.|--....+
T Consensus 854 ~~~~~~~~a~~~~~~~ 869 (876)
T d1qgra_ 854 KTNKAKTLARWATKEL 869 (876)
T ss_dssp SCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 9999998886655443
No 9
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.74 E-value=36 Score=38.17 Aligned_cols=334 Identities=12% Similarity=0.068 Sum_probs=152.3
Q ss_pred hhhHHHHHHHHHhccCCcceeehhHhHHHHHHhcCCchhhHHhhhhHHHHHHHHhHhcCchHHHHHHHHHHHHHHHHhHh
Q 001887 113 ASSLLGIIRTLLEQTRQEEMQILGCGTLVNFIDSQTDGTYMFNLEGLIPKLCQLAQEMGNDERALRLRSAGLQVLAYMVK 192 (1000)
Q Consensus 113 a~s~L~Ii~~LL~qs~~~~l~i~a~~tf~~F~~~q~D~~y~~~ye~fV~~f~~ma~~~~~de~~~rlR~AGLqAL~~vV~ 192 (1000)
.+.++.++...|. +.+...|..|+-+|-..+..- .......+..+++.+..+.... + ..+|.+.+.+|.-+..
T Consensus 393 l~~~l~~l~~~l~-s~~~~~reaa~~alg~i~eg~-~~~~~~~l~~li~~l~~~l~d~--~---~~Vr~~a~~~l~~~~~ 465 (888)
T d1qbkb_ 393 LPHILPLLKELLF-HHEWVVKESGILVLGAIAEGC-MQGMIPYLPELIPHLIQCLSDK--K---ALVRSITCWTLSRYAH 465 (888)
T ss_dssp HHHHHHHHHHTTT-SSSHHHHHHHHHHHHHHTTTS-HHHHTTTHHHHHHHHHHHTTSS--C---HHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHhhc-cchhHHHHHHHHHhhhhhhhH-HHHhcccchhhhHHHHHhccCC--C---HHHHHHHHHHHHHHHH
Confidence 4566777777777 666667766766665544311 1233344566676666655321 1 3578888888887664
Q ss_pred hhccccccccccchHHHHHHhhhccccCCCCCCccCccCCcchhhhhhhhcccccCCCCCCcccccccccccCCCCCCCC
Q 001887 193 FMGEQSHMSMDFDKIISVTLENFVDLQMKPANGKEGRQHSQSEDQWVQGLQNEEDNDSSFPDMSKKVSSLKDSMINPGPD 272 (1000)
Q Consensus 193 ~~~e~shis~q~D~IVpvILeNl~~~~~~~~d~~~~~~~~~~~~~~v~e~~~~E~~~~~~~~~~~r~ps~~~~~~~~~~~ 272 (1000)
..... .....++.+++.+|..+.+.. ..
T Consensus 466 ~~~~~-~~~~~~~~~l~~ll~~l~d~~-----------------~~---------------------------------- 493 (888)
T d1qbkb_ 466 WVVSQ-PPDTYLKPLMTELLKRILDSN-----------------KR---------------------------------- 493 (888)
T ss_dssp HHHSS-CHHHHTTTHHHHHHHHHSSSC-----------------HH----------------------------------
T ss_pred Hhhhh-hhhhhhhhhHHHHHHHhcCCC-----------------HH----------------------------------
Confidence 33211 111236777888877665320 01
Q ss_pred CCCCCCCChHHHHHHHHHHHHHhhhh--cchHHHHhhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhhcCCCcchHHHH
Q 001887 273 PTMDTSKSPSYWSRVCLDNMARLAKE--TTTVRRVLEPLFQIFDAENHWSTETGVACSVLLYLQSLLEESGENSHLLLCN 350 (1000)
Q Consensus 273 ~~~e~~e~p~vlA~~CLr~l~~~A~e--~ttvr~VLepvf~~lD~~~~Wsp~~gfAi~vf~~iq~l~e~~~Q~~~lvLs~ 350 (1000)
...-|-.+|.++...+.. .--+..+++.++.-++...... ...+..++..+...+.... +..-++..
T Consensus 494 --------V~~~a~~al~~l~~~~~~~l~p~~~~il~~l~~~l~~~~~~~--~~~~~~al~~l~~~~~~~~-~~~~~~~~ 562 (888)
T d1qbkb_ 494 --------VQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKN--LLILYDAIGTLADSVGHHL-NKPEYIQM 562 (888)
T ss_dssp --------HHHHHHHHHHHHHHHHTTSSGGGHHHHHHHHHHHTTTCCHHH--HHHHHHHHHHHHHHHGGGG-CSHHHHHH
T ss_pred --------HHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhhhhHHH--HHHHHHHHHHHHHhhhccc-cchHHHHH
Confidence 111244555555543332 1125566666666666544211 1233334433333221111 12223334
Q ss_pred HHHhhhc--cCCCCCchhhhhHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhcccccCCCCCCccccchHHHHHHH
Q 001887 351 LVKHLDH--KSVAKQPLAQTNIVDIATKLAQNAKLLASVAIIGTINDLIKHLRKCLQNSVELSSSGDGMAKTNADLQYSL 428 (1000)
Q Consensus 351 Lv~HLd~--k~v~~~p~~q~~IV~Vlt~La~~~~~~~svsvidvlsdLlrHLRkslq~s~~~s~~g~~~~~~~~~Lq~aL 428 (1000)
++..|.+ .....+......+++.+..++...........-.++..++..+...+.........+.........+....
T Consensus 563 l~~~l~~~~~~~~~~~~~~~~~le~l~~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 642 (888)
T d1qbkb_ 563 LMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPDQYEAPDKDFMIVA 642 (888)
T ss_dssp HHHHHHHHHTTSCTTCTTHHHHHHHHHHHHHHSTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTSCCCCTHHHHHH
T ss_pred HHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHH
Confidence 4333321 11123444455677777766654333333333344444444444443221100000000011134455555
Q ss_pred HHHHHHhhcccCCC-chHH---HHHHHHHhhcCCCccchhhhHHHHHHHHHHHhhcCCcccccccCcHHHHHHHHHHhcC
Q 001887 429 ENCISWLSKKVGDV-GPIL---DVMAGVLENMSNNTVVARTTISAVHRTAQIISTIPNISYRNKAFPEALFHQLLLAMAH 504 (1000)
Q Consensus 429 ~~CIg~LA~hV~da-~qI~---DMmavmLenis~~~~~ar~tvsa~y~ta~i~a~~pn~sy~~kaFP~all~qLL~am~~ 504 (1000)
-++++.++..++.. .+.. ..+..++.-+......-|. ++..-.+.++...+.. -+.+-+.++..|+...-+
T Consensus 643 l~~l~~l~~~l~~~~~~~~~~~~l~~~l~~~l~~~~~~vr~--~a~~llgdl~~~~~~~---~~~~l~~~~~~l~~~L~~ 717 (888)
T d1qbkb_ 643 LDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQ--SSFALLGDLTKACFQH---VKPCIADFMPILGTNLNP 717 (888)
T ss_dssp HHHHHHHHHHHTTTTHHHHHTSCHHHHHHHHHTCSSHHHHH--HHHHHHHHHHHHCGGG---TGGGHHHHHHHHHHTCCG
T ss_pred HHHHHHHHHHhhhhhhhhhhHhhHHHHHHHHhCCCChHHHH--HHHHHHHHHHHhhhHH---HHHHHHHHHHHHHHHhCc
Confidence 56666666555432 1111 1222233223322211121 1222222333222221 033445677667777777
Q ss_pred CCchhhHHHHHHHHHhh
Q 001887 505 PDHETRVGAHTVLSVVL 521 (1000)
Q Consensus 505 pD~e~Rl~a~~If~~lL 521 (1000)
+++++|-.|-..+..+.
T Consensus 718 ~~~~v~~~a~~~ig~ia 734 (888)
T d1qbkb_ 718 EFISVCNNATWAIGEIS 734 (888)
T ss_dssp GGHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 77777777666665553
No 10
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=83.09 E-value=35 Score=36.74 Aligned_cols=164 Identities=12% Similarity=0.119 Sum_probs=76.9
Q ss_pred HHHHHHhhhccCCCCCchhhhhHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhcccccCCCCCCccccchHHHHHH
Q 001887 348 LCNLVKHLDHKSVAKQPLAQTNIVDIATKLAQNAKLLASVAIIGTINDLIKHLRKCLQNSVELSSSGDGMAKTNADLQYS 427 (1000)
Q Consensus 348 Ls~Lv~HLd~k~v~~~p~~q~~IV~Vlt~La~~~~~~~svsvidvlsdLlrHLRkslq~s~~~s~~g~~~~~~~~~Lq~a 427 (1000)
+..++...+... .+..++.....++..++..........+..++..+...|...+......-.. ........++..
T Consensus 500 ~~~l~~~~~~~~--~~~~~~~~~~~al~~~i~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~l~~~ 575 (861)
T d2bpta1 500 VDGLIGAANRID--NEFNARASAFSALTTMVEYATDTVAETSASISTFVMDKLGQTMSVDENQLTL--EDAQSLQELQSN 575 (861)
T ss_dssp HHHHHHHHTCSC--CGGGHHHHHHHHHHHHHHHCCGGGHHHHHHHHHHHHHHHHHHTTSCGGGCCH--HHHHHHHHHHHH
T ss_pred HHHHHHHHhhhh--hhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh--hHHhHHHHHHHH
Confidence 334444444322 2455666666666666654443333333344444444455544332211000 000112345666
Q ss_pred HHHHHHHhhcccC-CCchHH-HHHHHHHhhcCCCcc--chhhhHHHHHHHHHHHhhcCCcccccccCcHHHHHHHHHHhc
Q 001887 428 LENCISWLSKKVG-DVGPIL-DVMAGVLENMSNNTV--VARTTISAVHRTAQIISTIPNISYRNKAFPEALFHQLLLAMA 503 (1000)
Q Consensus 428 L~~CIg~LA~hV~-da~qI~-DMmavmLenis~~~~--~ar~tvsa~y~ta~i~a~~pn~sy~~kaFP~all~qLL~am~ 503 (1000)
+..+++.+.++.+ +..+.. .+|..++.-+..... +-.....+. +.++..++.. -..|-+.++..|+..+-
T Consensus 576 ~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~v~~~~l~~l---~~l~~~~~~~---~~~~l~~i~p~l~~~l~ 649 (861)
T d2bpta1 576 ILTVLAAVIRKSPSSVEPVADMLMGLFFRLLEKKDSAFIEDDVFYAI---SALAASLGKG---FEKYLETFSPYLLKALN 649 (861)
T ss_dssp HHHHHHHHHHHCGGGTGGGHHHHHHHHHHHHHSTTGGGTHHHHHHHH---HHHHHHHGGG---GHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcchhhHHHHHHHHHHHHhhhcccCCchhHHHHHHHHH---HHHHHHhhHH---HHHHHHHHhhHHHHHhC
Confidence 6667776665542 233322 234444433333221 111112222 2233222210 02233566666778888
Q ss_pred CCCchhhHHHHHHHHHhh
Q 001887 504 HPDHETRVGAHTVLSVVL 521 (1000)
Q Consensus 504 ~pD~e~Rl~a~~If~~lL 521 (1000)
++++++|..|-.+++.+.
T Consensus 650 ~~~~~v~~~a~~~l~~i~ 667 (861)
T d2bpta1 650 QVDSPVSITAVGFIADIS 667 (861)
T ss_dssp CTTSHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHH
Confidence 999999999888877653
No 11
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=82.47 E-value=16 Score=36.57 Aligned_cols=72 Identities=17% Similarity=0.181 Sum_probs=45.0
Q ss_pred HHHHHHHHHhccCCcceeehhHhHHHHHHhcCCchhhHHhhhhHHHHHHHHhHhcCchHHHHHHHHHHHHHHHHhHh
Q 001887 116 LLGIIRTLLEQTRQEEMQILGCGTLVNFIDSQTDGTYMFNLEGLIPKLCQLAQEMGNDERALRLRSAGLQVLAYMVK 192 (1000)
Q Consensus 116 ~L~Ii~~LL~qs~~~~l~i~a~~tf~~F~~~q~D~~y~~~ye~fV~~f~~ma~~~~~de~~~rlR~AGLqAL~~vV~ 192 (1000)
++..+-.+|..+.+++++..++.++..++....+....---.+.|+.+.++..... ..+|...+.||..+..
T Consensus 57 ~i~~Lv~lL~~~~~~~v~~~a~~~L~~la~~~~~~~~~i~~~~~i~~l~~~L~~~~-----~~~~~~a~~~L~nl~~ 128 (434)
T d1q1sc_ 57 LIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPH-----AHISEQAVWALGNIAG 128 (434)
T ss_dssp CHHHHHHHTTCGGGHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSC-----HHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHccCCCHHHHHHHHHHHHHHhcCChhhhhHhhhccchhhhhhccccCC-----HHHHHHHHHHHHHHhc
Confidence 44455556654556778888999988887543322222234678899998876432 2445567777776653
No 12
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.29 E-value=24 Score=36.75 Aligned_cols=71 Identities=6% Similarity=0.067 Sum_probs=45.1
Q ss_pred HHHHHHHHHhccCCcceeehhHhHHHHHHhcCCchhhHHhhhhHHHHHHHHhHhcCchHHHHHHHHHHHHHHHHhH
Q 001887 116 LLGIIRTLLEQTRQEEMQILGCGTLVNFIDSQTDGTYMFNLEGLIPKLCQLAQEMGNDERALRLRSAGLQVLAYMV 191 (1000)
Q Consensus 116 ~L~Ii~~LL~qs~~~~l~i~a~~tf~~F~~~q~D~~y~~~ye~fV~~f~~ma~~~~~de~~~rlR~AGLqAL~~vV 191 (1000)
.+..+-.+|. +.+..++..|+..+...+.+..+........++|+.+..+-...++. ..|.....+|..+.
T Consensus 18 aip~L~~lL~-~~~~~v~~~A~~~l~~l~~~~~~~~~~~~~~~~v~~l~~~L~~~~~~----~~~~~a~~~L~~l~ 88 (529)
T d1jdha_ 18 AIPELTKLLN-DEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDV----ETARCTAGTLHNLS 88 (529)
T ss_dssp HHHHHHHHHT-CSCHHHHHHHHHHHHHHHTSHHHHHHHHTCHHHHHHHHHHHHHCCCH----HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHHHHHHhccHHHHHHHHhhhHHHHHHHHHcCCCCH----HHHHHHHHHHHHHh
Confidence 3444555676 67777888888888888765443344444567888888766554443 34555666776653
No 13
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=76.97 E-value=39 Score=33.58 Aligned_cols=68 Identities=13% Similarity=0.232 Sum_probs=46.3
Q ss_pred HHHHHHHhccCCcceeehhHhHHHHHHhcCCch--hhHHhhhhHHHHHHHHhHhcCchHHHHHHHHHHHHHHHHhHh
Q 001887 118 GIIRTLLEQTRQEEMQILGCGTLVNFIDSQTDG--TYMFNLEGLIPKLCQLAQEMGNDERALRLRSAGLQVLAYMVK 192 (1000)
Q Consensus 118 ~Ii~~LL~qs~~~~l~i~a~~tf~~F~~~q~D~--~y~~~ye~fV~~f~~ma~~~~~de~~~rlR~AGLqAL~~vV~ 192 (1000)
.+|+ .|. +.+++.++.|+..+.+......+. +-+.+. ++|+.+.++-....+ ..+|..++.+|..+++
T Consensus 17 ~lv~-~l~-s~~~~~~~~a~~~l~~l~s~~~~~~~~~i~~~-g~i~~Lv~lL~~~~~----~~v~~~a~~~L~~la~ 86 (434)
T d1q1sc_ 17 DIVK-GIN-SNNLESQLQATQAARKLLSREKQPPIDNIIRA-GLIPKFVSFLGKTDC----SPIQFESAWALTNIAS 86 (434)
T ss_dssp HHHH-HHT-SSCHHHHHHHHHHHHHHHHSSSCCCHHHHHHT-TCHHHHHHHTTCGGG----HHHHHHHHHHHHHHHT
T ss_pred HHHH-HHc-CCCHHHHHHHHHHHHHHhcCCCCchHHHHHHC-CCHHHHHHHHccCCC----HHHHHHHHHHHHHHhc
Confidence 3444 466 789999999999998876544432 233333 689999998753322 2467778888888764
No 14
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=68.89 E-value=5.4 Score=39.97 Aligned_cols=111 Identities=9% Similarity=0.157 Sum_probs=67.7
Q ss_pred eHHHHHHHHHHhcccccCcchhhHHHHHHHHHhccCCcceeehhHhHHHHHHhcCCchhhHHhhhhHHHHHHHHhHhcCc
Q 001887 93 VVVCIYKKFLSSCKEQMPLFASSLLGIIRTLLEQTRQEEMQILGCGTLVNFIDSQTDGTYMFNLEGLIPKLCQLAQEMGN 172 (1000)
Q Consensus 93 V~l~i~~~Ll~~C~~~l~LFa~s~L~Ii~~LL~qs~~~~l~i~a~~tf~~F~~~q~D~~y~~~ye~fV~~f~~ma~~~~~ 172 (1000)
.+..++..+...++++ +.+.++.++...|. +.+...|.-|+..|-..+..-.+.........+++.+..+.+..
T Consensus 346 ~a~~~l~~l~~~~~~~---~~~~l~~~i~~~l~-s~~~~~r~aal~~l~~i~~~~~~~~~~~~l~~i~~~l~~~l~d~-- 419 (458)
T d1ibrb_ 346 AAGVCLMLLATCCEDD---IVPHVLPFIKEHIK-NPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDP-- 419 (458)
T ss_dssp HHHHHHHHHHHHTTTT---HHHHHHHHHHHHTT-CSSHHHHHHHHHHHHHTSSSSCTTTTCTTTTTHHHHHHHGGGCS--
T ss_pred HHHHHHHHHHHhccHh---hhhHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHhCCC--
Confidence 3455555555555543 24566777777777 66666666666666665542222122223455677666665422
Q ss_pred hHHHHHHHHHHHHHHHHhHhhhccccccccccchHHHHHHhhhc
Q 001887 173 DERALRLRSAGLQVLAYMVKFMGEQSHMSMDFDKIISVTLENFV 216 (1000)
Q Consensus 173 de~~~rlR~AGLqAL~~vV~~~~e~shis~q~D~IVpvILeNl~ 216 (1000)
. .++|.+.+.+|..++...++... .+.++|.+|..+-
T Consensus 420 ~---~~VR~~a~~~l~~i~~~~~~~~~----~~~~l~~ll~~ll 456 (458)
T d1ibrb_ 420 S---VVVRDTAAWTVGRICELLPEAAI----NDVYLAPLLQCLI 456 (458)
T ss_dssp C---HHHHHHHHHHHHHHHHHGGGGCC----STTTHHHHHHHHH
T ss_pred C---HHHHHHHHHHHHHHHHHhhcccc----hhhHHHHHHHHHh
Confidence 2 36899999999999877665443 5667787776653
No 15
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=64.57 E-value=72 Score=32.65 Aligned_cols=72 Identities=13% Similarity=0.163 Sum_probs=43.7
Q ss_pred HHHHHHHHHhccCCcceeehhHhHHHHHHhcCCchhhHHhhhhHHHHHHHHhHhcCchHHHHHHHHHHHHHHHHhHh
Q 001887 116 LLGIIRTLLEQTRQEEMQILGCGTLVNFIDSQTDGTYMFNLEGLIPKLCQLAQEMGNDERALRLRSAGLQVLAYMVK 192 (1000)
Q Consensus 116 ~L~Ii~~LL~qs~~~~l~i~a~~tf~~F~~~q~D~~y~~~ye~fV~~f~~ma~~~~~de~~~rlR~AGLqAL~~vV~ 192 (1000)
++..+-.+|....+++++..++..+...+....+..-...-.++++.++++...... .+|..++.+|..++.
T Consensus 120 ~i~~Lv~~l~~~~~~~iq~~a~~~L~ni~~~~~~~~~~~~~~g~i~~l~~lL~s~~~-----~i~~~a~~~L~nia~ 191 (503)
T d1wa5b_ 120 VVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSV-----EVKEQAIWALGNVAG 191 (503)
T ss_dssp CHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHCCH-----HHHHHHHHHHHHHHT
T ss_pred ChHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHhCCChHHHHHHhcCCCh-----hHHHHHHHHHHHHhh
Confidence 444444455535567788888888877664322222223335688999988874433 355667777777654
No 16
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=63.81 E-value=99 Score=32.91 Aligned_cols=115 Identities=11% Similarity=0.127 Sum_probs=67.0
Q ss_pred eHHHHHHHHHHhcccccCcchhhHHHHHHHHHh----ccCCcceeehhHhHHHHHHhcCCch-hhHHhhhhHHHHHHHHh
Q 001887 93 VVVCIYKKFLSSCKEQMPLFASSLLGIIRTLLE----QTRQEEMQILGCGTLVNFIDSQTDG-TYMFNLEGLIPKLCQLA 167 (1000)
Q Consensus 93 V~l~i~~~Ll~~C~~~l~LFa~s~L~Ii~~LL~----qs~~~~l~i~a~~tf~~F~~~q~D~-~y~~~ye~fV~~f~~ma 167 (1000)
.++.++..+.+.....+..+...+..++..++. ...+.+++..+...|..+...-.+. ........+++.+++..
T Consensus 154 ~al~~l~~i~e~~~~~~~~~~~~~~~il~~i~~~~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 233 (861)
T d2bpta1 154 ASLLALGYMCESADPQSQALVSSSNNILIAIVQGAQSTETSKAVRLAALNALADSLIFIKNNMEREGERNYLMQVVCEAT 233 (861)
T ss_dssp HHHHHHHHHHHTSSTTSSTTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHhHhHHhhhhhhHHHHhHHHHh
Confidence 467888888877777766666666666655553 2334567777777777766543221 22233444555555554
Q ss_pred HhcCchHHHHHHHHHHHHHHHHhHhhhccccccccccchHHHHHHhh
Q 001887 168 QEMGNDERALRLRSAGLQVLAYMVKFMGEQSHMSMDFDKIISVTLEN 214 (1000)
Q Consensus 168 ~~~~~de~~~rlR~AGLqAL~~vV~~~~e~shis~q~D~IVpvILeN 214 (1000)
.. ++ ...|.+++++|..++.... ..+...+.+++..++..
T Consensus 234 ~~--~~---~~~~~~~~~~l~~i~~~~~--~~~~~~l~~~l~~l~~~ 273 (861)
T d2bpta1 234 QA--ED---IEVQAAAFGCLCKIMSKYY--TFMKPYMEQALYALTIA 273 (861)
T ss_dssp TC--SC---HHHHHHHHHHHHHHHHHHG--GGCHHHHHHTHHHHHHH
T ss_pred cC--CC---HHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
Confidence 32 22 2467888999998887643 22233344555544433
No 17
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=61.54 E-value=40 Score=34.79 Aligned_cols=62 Identities=11% Similarity=0.180 Sum_probs=36.7
Q ss_pred cCCcceeehhHhHHHHHHhcCCchhhHH-hhhhHHHHHHHHhHhcCchHHHHHHHHHHHHHHHHhHh
Q 001887 127 TRQEEMQILGCGTLVNFIDSQTDGTYMF-NLEGLIPKLCQLAQEMGNDERALRLRSAGLQVLAYMVK 192 (1000)
Q Consensus 127 s~~~~l~i~a~~tf~~F~~~q~D~~y~~-~ye~fV~~f~~ma~~~~~de~~~rlR~AGLqAL~~vV~ 192 (1000)
+.+.+.+.-++..|-.....+.+...-. --.++|+.+.++.+...+. .++...+.+|..+..
T Consensus 87 s~~~~~~~~a~~~~r~~ls~~~~~~i~~ii~~g~i~~Lv~~l~~~~~~----~iq~~a~~~L~ni~~ 149 (503)
T d1wa5b_ 87 SDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPE----MLQLEAAWALTNIAS 149 (503)
T ss_dssp CSSHHHHHHHHHHHHHHTCCSSSCSHHHHHHTTCHHHHHHTTSTTSCH----HHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHhcCCCchHHHHHHCCChHHHHHHHcCCCCH----HHHHHHHHHHHHHHc
Confidence 6677777777776665544333322211 1156888898888654443 456666777776654
No 18
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=49.44 E-value=1.7e+02 Score=31.15 Aligned_cols=183 Identities=12% Similarity=0.148 Sum_probs=93.9
Q ss_pred HHHHHHHHHHhhhhcchHHHHhhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhhcCCCcchHHHHHHHhhhccCCCCCc
Q 001887 285 SRVCLDNMARLAKETTTVRRVLEPLFQIFDAENHWSTETGVACSVLLYLQSLLEESGENSHLLLCNLVKHLDHKSVAKQP 364 (1000)
Q Consensus 285 A~~CLr~l~~~A~e~ttvr~VLepvf~~lD~~~~Wsp~~gfAi~vf~~iq~l~e~~~Q~~~lvLs~Lv~HLd~k~v~~~p 364 (1000)
|..++.+++... ......+++.++..+...+.+.. .-++.+++.+.. +.++.+--++..+.++++. .++|
T Consensus 370 ai~aI~~la~~~--~~~~~~~i~~Ll~ll~~~~~~v~--~e~i~~i~~i~~---~~p~~~~~ii~~L~~~l~~---~~~~ 439 (579)
T d2vglb_ 370 AVRAIGRCAIKV--EQSAERCVSTLLDLIQTKVNYVV--QEAIVVIRDIFR---KYPNKYESIIATLCENLDS---LDEP 439 (579)
T ss_dssp HHHHHHHHHTTC--HHHHHHHHHHHHHHHHTCCHHHH--HHHHHHHHHHHH---HSCSSCCTTHHHHHHTTTT---CCSH
T ss_pred HHHHHHHHHHhC--chHHHHHHHHHHHHHhCCchhHH--HHHHHHHHHHHH---hChHHHHHHHHHHHHHHHh---cCcH
Confidence 444444444221 22356777888887766553332 345556655543 3333445678888899976 3478
Q ss_pred hhhhhHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhcccccCCCCCCccccchHHHHHHHHHHHHHhhcccCCCch
Q 001887 365 LAQTNIVDIATKLAQNAKLLASVAIIGTINDLIKHLRKCLQNSVELSSSGDGMAKTNADLQYSLENCISWLSKKVGDVGP 444 (1000)
Q Consensus 365 ~~q~~IV~Vlt~La~~~~~~~svsvidvlsdLlrHLRkslq~s~~~s~~g~~~~~~~~~Lq~aL~~CIg~LA~hV~da~q 444 (1000)
..+..++.++..-+.. ... ..++++.+-..+... ....|-++..++.-|--+-|. .
T Consensus 440 ~~~~~~iwilGEy~~~---i~~------~~~ll~~l~~~f~~e-------------~~~vq~~iLta~~Kl~~~~p~--~ 495 (579)
T d2vglb_ 440 DARAAMIWIVGEYAER---IDN------ADELLESFLEGFHDE-------------STQVQLTLLTAIVKLFLKKPS--E 495 (579)
T ss_dssp HHHHHHHHHHHTTCTT---CTT------HHHHHHHHSTTCSSS-------------CHHHHHHHHHHHHHHHTTCCS--T
T ss_pred HHHHHHHHHHhCcccc---ccc------HHHHHHHHHHhhhhC-------------CHHHHHHHHHHHHHHHhcCcH--H
Confidence 8888887666433321 111 124444443333221 233445555666665445454 3
Q ss_pred HHHHHHHHHhhcCCCcc-chhhhHHHHHH--------HH-H-HHhhcCCcccccccCcHHHHHHHHHH
Q 001887 445 ILDVMAGVLENMSNNTV-VARTTISAVHR--------TA-Q-IISTIPNISYRNKAFPEALFHQLLLA 501 (1000)
Q Consensus 445 I~DMmavmLenis~~~~-~ar~tvsa~y~--------ta-~-i~a~~pn~sy~~kaFP~all~qLL~a 501 (1000)
..+|+.-+|...-.... +-+---+..|. .| . +++.-|-++..+..|+.+++++|+.-
T Consensus 496 ~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 563 (579)
T d2vglb_ 496 TQELVQQVLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEPTLLDELICH 563 (579)
T ss_dssp THHHHHHHHHHHHTTCCCHHHHHHHHHHHTTTTTCTTHHHHHHTSCCCCCCSCSSCCCHHHHHHHHTT
T ss_pred HHHHHHHHHhhccccccchhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhcccccccCCHHHHHHHHHh
Confidence 45666666642211110 10100111111 11 1 22335556677778999999998753
No 19
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=47.90 E-value=52 Score=31.20 Aligned_cols=92 Identities=14% Similarity=0.185 Sum_probs=46.7
Q ss_pred HhhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhhcCCCcch-----HHHHHHHhhhccCCCCCchhhhhHHHHHHHHHH
Q 001887 305 VLEPLFQIFDAENHWSTETGVACSVLLYLQSLLEESGENSHL-----LLCNLVKHLDHKSVAKQPLAQTNIVDIATKLAQ 379 (1000)
Q Consensus 305 VLepvf~~lD~~~~Wsp~~gfAi~vf~~iq~l~e~~~Q~~~l-----vLs~Lv~HLd~k~v~~~p~~q~~IV~Vlt~La~ 379 (1000)
.+..+...+.+.+ ..+-......+..++.....+... ++..|++.|.+. ++.+|...+.++..|+.
T Consensus 145 gi~~L~~lL~~~~-----~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~v~~L~~lL~~~----~~~~~~~a~~aL~~L~~ 215 (264)
T d1xqra1 145 GFSVLMRAMQQQV-----QKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVALVRTE----HSPFHEHVLGALCSLVT 215 (264)
T ss_dssp HHHHHHHHHHSSC-----HHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHHHHHHHTSC----CSTHHHHHHHHHHHHHT
T ss_pred hhhHHHHHHhcCc-----hHHHHHHHHHHHHHHhccHHHHHHHHHhhhHHHHHHHHcCC----CHHHHHHHHHHHHHHHh
Confidence 3555666665543 233333444444444333223222 366777777653 57788888888877774
Q ss_pred hcccccch---hHHHHHHHHHHHHHHhhcc
Q 001887 380 NAKLLASV---AIIGTINDLIKHLRKCLQN 406 (1000)
Q Consensus 380 ~~~~~~sv---svidvlsdLlrHLRkslq~ 406 (1000)
.......- +.+ .+-.+++|+.+.+..
T Consensus 216 ~~~~~~~~~~~~~l-~~~~~L~~~~~~~~~ 244 (264)
T d1xqra1 216 DFPQGVRECREPEL-GLEELLRHRCQLLQQ 244 (264)
T ss_dssp TCHHHHHHHHCGGG-CHHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHhhh-hHHHHHHHHHHhccc
Confidence 33222111 011 233456666666543
No 20
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment {Mouse (Mus musculus) [TaxId: 10090]}
Probab=45.19 E-value=1.1e+02 Score=32.83 Aligned_cols=128 Identities=7% Similarity=0.107 Sum_probs=73.5
Q ss_pred HHHHHHHHHhhhhcchHHHHhhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhhcCCCcchHHHHHHHhhhccCCCCCch
Q 001887 286 RVCLDNMARLAKETTTVRRVLEPLFQIFDAENHWSTETGVACSVLLYLQSLLEESGENSHLLLCNLVKHLDHKSVAKQPL 365 (1000)
Q Consensus 286 ~~CLr~l~~~A~e~ttvr~VLepvf~~lD~~~~Wsp~~gfAi~vf~~iq~l~e~~~Q~~~lvLs~Lv~HLd~k~v~~~p~ 365 (1000)
...|.=+...+. ..++..|++-++.|+.+.+ ..|...+...|..++++-+.+.--.+..+++.|.... ..
T Consensus 379 ~~aL~lL~~L~n-~~Ni~~Iv~eL~~yl~~~d-----~~~k~~~i~~I~~la~k~~~~~~~~i~~Ll~ll~~~~----~~ 448 (584)
T d2vgla_ 379 QRAVDLLYAMCD-RSNAQQIVAEMLSYLETAD-----YSIREEIVLKVAILAEKYAVDYTWYVDTILNLIRIAG----DY 448 (584)
T ss_dssp HHHHHHHHHHCC-HHHHHHHHHHHHHHHHHCC-----HHHHHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHG----GG
T ss_pred HHHHHHHHHhCC-HHHHHHHHHHHHHHHhhCC-----HHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHHHhcc----hh
Confidence 334444455566 6778999999999986532 5677777777777766655566667778888776532 23
Q ss_pred hhhhHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhcccccCCCCCCccccchHHHHHHHHHHHHHhhcccCCC
Q 001887 366 AQTNIVDIATKLAQNAKLLASVAIIGTINDLIKHLRKCLQNSVELSSSGDGMAKTNADLQYSLENCISWLSKKVGDV 442 (1000)
Q Consensus 366 ~q~~IV~Vlt~La~~~~~~~svsvidvlsdLlrHLRkslq~s~~~s~~g~~~~~~~~~Lq~aL~~CIg~LA~hV~da 442 (1000)
+...++..+..++... +.+- -.++..|+..| +.. .....+..+..=+||++|......
T Consensus 449 v~~ei~~~l~~li~~~---~~~r-~~~v~~l~~~l----~~~-----------~~~~~~~~~~~wilGEYG~~~~~~ 506 (584)
T d2vgla_ 449 VSEEVWYRVIQIVINR---DDVQ-GYAAKTVFEAL----QAP-----------ACHENLVKVGGYILGEFGXXXXXX 506 (584)
T ss_dssp SCSHHHHHHHHHHGGG---CSCH-HHHHHHHHHHH----TSS-----------SCCHHHHHHHHHHHHHHTHHHHSS
T ss_pred hHHHHHHHHHHHHhcC---cHHH-HHHHHHHHHHh----cCC-----------CchHHHHHHHeeeeecCCCCcccc
Confidence 3345555555444321 1110 11222233322 211 113455666678899999876433
No 21
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.87 E-value=1.6e+02 Score=29.89 Aligned_cols=87 Identities=15% Similarity=0.137 Sum_probs=39.5
Q ss_pred HHHHHHHHHHhhhhcchHHHHhhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhhcCCCc-----chHHHHHHHhhhccC
Q 001887 285 SRVCLDNMARLAKETTTVRRVLEPLFQIFDAENHWSTETGVACSVLLYLQSLLEESGENS-----HLLLCNLVKHLDHKS 359 (1000)
Q Consensus 285 A~~CLr~l~~~A~e~ttvr~VLepvf~~lD~~~~Wsp~~gfAi~vf~~iq~l~e~~~Q~~-----~lvLs~Lv~HLd~k~ 359 (1000)
+..||.++............++..++..+++.+. .....|..++ ..+......++ +-.+..+++.+.+.+
T Consensus 247 a~~~l~~ls~~~~~~~~~~~~i~~Lv~ll~~~~~--~~~~~a~~~L---~~l~~~~~~~~~~i~~~~~i~~Li~~l~~~~ 321 (529)
T d1jdha_ 247 CLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDI--NVVTCAAGIL---SNLTCNNYKNKMMVCQVGGIEALVRTVLRAG 321 (529)
T ss_dssp HHHHHHHHHTTCTTCSCCHHHHHHHHHHTTCSCH--HHHHHHHHHH---HHHTTTCHHHHHHHHHTTHHHHHHHHHHHHT
T ss_pred hhhHHHhccccccchhhhhhcchhhhhhcccccH--HHHHHHHHHH---HhhccchhHHHHHHHHhhhHHHHHHHHHhhh
Confidence 4556666654333233345677777777765431 1122333333 33322111121 233555666665422
Q ss_pred CCCCchhhhhHHHHHHHHH
Q 001887 360 VAKQPLAQTNIVDIATKLA 378 (1000)
Q Consensus 360 v~~~p~~q~~IV~Vlt~La 378 (1000)
..+.++...+.++..|+
T Consensus 322 --~~~~~~~~a~~aL~~l~ 338 (529)
T d1jdha_ 322 --DREDITEPAICALRHLT 338 (529)
T ss_dssp --TCHHHHHHHHHHHHHHT
T ss_pred --cchhHHHHHHHHhhccc
Confidence 13555555555554444
No 22
>d1jl7a_ a.1.1.2 (A:) Glycera globin {Marine bloodworm (Glycera dibranchiata) [TaxId: 6350]}
Probab=41.64 E-value=40 Score=29.54 Aligned_cols=52 Identities=15% Similarity=0.188 Sum_probs=39.2
Q ss_pred HHHHHHHHHhhh---cCCceeeHHHHHHHHHHhcccccCcc-------------hhhHHHHHHHHHhc
Q 001887 75 LEQRCYKDLRNE---NFGSVKVVVCIYKKFLSSCKEQMPLF-------------ASSLLGIIRTLLEQ 126 (1000)
Q Consensus 75 LekR~~kDl~r~---r~G~V~V~l~i~~~Ll~~C~~~l~LF-------------a~s~L~Ii~~LL~q 126 (1000)
-++++-++-|+. ..+-..++..+|.+|.+.+|+-.++| +..++..|..+++.
T Consensus 5 ~q~~~i~~sW~~v~~~~~~~~~g~~~f~rlF~~~P~~~~~F~~~~~~~~~~~~h~~~v~~~l~~~i~~ 72 (147)
T d1jl7a_ 5 AQRQVVASTWKDIAGADNGAGVGKECLSKFISAHPEMAAVFGFSGASDPGVAELGAKVLAQIGVAVSH 72 (147)
T ss_dssp HHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHHHCGGGHHHHTCSSTTCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHCHHHHHhCcccccCCHHHHHHHHHHHHHHHHHHHc
Confidence 366777788866 33445788899999999999998888 44566777777773
No 23
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.16 E-value=1.7e+02 Score=28.23 Aligned_cols=95 Identities=17% Similarity=0.083 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHhhcccCCCchHHHHHHHHHhhcCCCccchhhhHHHHHHHHHHHhhcCCcccccccCcHHHHHHHHHH
Q 001887 422 ADLQYSLENCISWLSKKVGDVGPILDVMAGVLENMSNNTVVARTTISAVHRTAQIISTIPNISYRNKAFPEALFHQLLLA 501 (1000)
Q Consensus 422 ~~Lq~aL~~CIg~LA~hV~da~qI~DMmavmLenis~~~~~ar~tvsa~y~ta~i~a~~pn~sy~~kaFP~all~qLL~a 501 (1000)
...+.+...|++.++...|+. -+..++..+.+.+...-. +..-++++-.+.++..... ..-+.|-..++..|+..
T Consensus 341 ~~~~~~a~~~l~~l~~~~~~~-~~~~l~~~i~~~l~s~~~--~~r~aal~~l~~i~~~~~~--~~~~~~l~~i~~~l~~~ 415 (458)
T d1ibrb_ 341 WNPCKAAGVCLMLLATCCEDD-IVPHVLPFIKEHIKNPDW--RYRDAAVMAFGCILEGPEP--SQLKPLVIQAMPTLIEL 415 (458)
T ss_dssp CSHHHHHHHHHHHHHHHTTTT-HHHHHHHHHHHHTTCSSH--HHHHHHHHHHHHTSSSSCT--TTTCTTTTTHHHHHHHG
T ss_pred ccHHHHHHHHHHHHHHhccHh-hhhHHHHHHHHHhcCCCH--HHHHHHHHHHHHHHHhcCH--hHHHHHHHHHHHHHHHH
Confidence 346677788888888877743 123344444555554322 2223333333333211101 11134555677778888
Q ss_pred hcCCCchhhHHHHHHHHHhh
Q 001887 502 MAHPDHETRVGAHTVLSVVL 521 (1000)
Q Consensus 502 m~~pD~e~Rl~a~~If~~lL 521 (1000)
+-+|++.+|..|...+..+.
T Consensus 416 l~d~~~~VR~~a~~~l~~i~ 435 (458)
T d1ibrb_ 416 MKDPSVVVRDTAAWTVGRIC 435 (458)
T ss_dssp GGCSCHHHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHHH
Confidence 89999999999999888775
No 24
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment {Mouse (Mus musculus) [TaxId: 10090]}
Probab=37.45 E-value=1.9e+02 Score=30.75 Aligned_cols=135 Identities=13% Similarity=0.159 Sum_probs=71.0
Q ss_pred HHHHHHHHhhhhcchHHHHhhhhhhhccCCCCCCCCcchHHHHHHHHHHHHhhcCCCcchHH----HHHHHhhhccCCCC
Q 001887 287 VCLDNMARLAKETTTVRRVLEPLFQIFDAENHWSTETGVACSVLLYLQSLLEESGENSHLLL----CNLVKHLDHKSVAK 362 (1000)
Q Consensus 287 ~CLr~l~~~A~e~ttvr~VLepvf~~lD~~~~Wsp~~gfAi~vf~~iq~l~e~~~Q~~~lvL----s~Lv~HLd~k~v~~ 362 (1000)
.|.+-+............+++++..++.+.+ ...-...+..+..++.... .+-++ ...+.-|.. ..
T Consensus 304 e~i~~i~~~~~~~~~~~~~i~~l~~lL~s~~-----~niry~aL~~L~~L~~~~~--~~~~~~~~~~~il~~l~~---~~ 373 (584)
T d2vgla_ 304 EAISLIIHHDSEPNLLVRACNQLGQFLQHRE-----TNLRYLALESMCTLASSEF--SHEAVKTHIETVINALKT---ER 373 (584)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHSSCSC-----HHHHHHHHHHHHHHTTCTT--THHHHHTTHHHHHHHHTT---CC
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHhcCCC-----cchHHHHHHHHHHHHccCC--CHHHHHHHHHHHHHhccc---Cc
Confidence 3444444332222334556777777776543 2233334444444432211 11111 111222222 12
Q ss_pred CchhhhhHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhcccccCCCCCCccccchHHHHHHHHHHHHHhhccc-CC
Q 001887 363 QPLAQTNIVDIATKLAQNAKLLASVAIIGTINDLIKHLRKCLQNSVELSSSGDGMAKTNADLQYSLENCISWLSKKV-GD 441 (1000)
Q Consensus 363 ~p~~q~~IV~Vlt~La~~~~~~~svsvidvlsdLlrHLRkslq~s~~~s~~g~~~~~~~~~Lq~aL~~CIg~LA~hV-~d 441 (1000)
++.++...++++..++.. . .+-.++..|+.+++. .+..+...++.+|+.+|.+. ++
T Consensus 374 ~~~Ir~~aL~lL~~L~n~----~--Ni~~Iv~eL~~yl~~-----------------~d~~~k~~~i~~I~~la~k~~~~ 430 (584)
T d2vgla_ 374 DVSVRQRAVDLLYAMCDR----S--NAQQIVAEMLSYLET-----------------ADYSIREEIVLKVAILAEKYAVD 430 (584)
T ss_dssp CHHHHHHHHHHHHHHCCH----H--HHHHHHHHHHHHHHH-----------------CCHHHHHHHHHHHHHHHHHHCSS
T ss_pred hhHHHHHHHHHHHHhCCH----H--HHHHHHHHHHHHHhh-----------------CCHHHHHHHHHHHHHHHHHCcch
Confidence 456777777777666532 1 124566666666642 03568888999999999887 56
Q ss_pred CchHHHHHHHHHh
Q 001887 442 VGPILDVMAGVLE 454 (1000)
Q Consensus 442 a~qI~DMmavmLe 454 (1000)
.....|.+..+++
T Consensus 431 ~~~~i~~Ll~ll~ 443 (584)
T d2vgla_ 431 YTWYVDTILNLIR 443 (584)
T ss_dssp THHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 6666676666543
No 25
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.44 E-value=25 Score=33.67 Aligned_cols=94 Identities=9% Similarity=0.135 Sum_probs=63.0
Q ss_pred HHHHHHHHHHhcccccC-cchhhHHHHHHHHHhccCCcceeehhHhHHHHHHhcCCchhhHHhhhhHHHHHHHHhHhcCc
Q 001887 94 VVCIYKKFLSSCKEQMP-LFASSLLGIIRTLLEQTRQEEMQILGCGTLVNFIDSQTDGTYMFNLEGLIPKLCQLAQEMGN 172 (1000)
Q Consensus 94 ~l~i~~~Ll~~C~~~l~-LFa~s~L~Ii~~LL~qs~~~~l~i~a~~tf~~F~~~q~D~~y~~~ye~fV~~f~~ma~~~~~ 172 (1000)
++.++..|+..++.... +.....+..+-.+|. +.+.+++.-++..+..++....+........+.|+.++.+.+....
T Consensus 122 a~~aL~~l~~~~~~~~~~~~~~~gi~~L~~lL~-~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~v~~L~~lL~~~~~ 200 (264)
T d1xqra1 122 ALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQ-QQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVALVRTEHS 200 (264)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHH-SSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHHHHHHHTSCCS
T ss_pred HHHHHHHHhccchhhHHHHHHhhhhhHHHHHHh-cCchHHHHHHHHHHHHHHhccHHHHHHHHHhhhHHHHHHHHcCCCH
Confidence 34455555555443322 334445677777888 7899999999999988887665554444456789999999865433
Q ss_pred hHHHHHHHHHHHHHHHHhHhh
Q 001887 173 DERALRLRSAGLQVLAYMVKF 193 (1000)
Q Consensus 173 de~~~rlR~AGLqAL~~vV~~ 193 (1000)
.+|...+.||..++..
T Consensus 201 -----~~~~~a~~aL~~L~~~ 216 (264)
T d1xqra1 201 -----PFHEHVLGALCSLVTD 216 (264)
T ss_dssp -----THHHHHHHHHHHHHTT
T ss_pred -----HHHHHHHHHHHHHHhc
Confidence 3566778888877653
No 26
>d1eo0a_ a.48.3.1 (A:) Transcription elongation factor TFIIS N-domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=29.36 E-value=33 Score=28.38 Aligned_cols=53 Identities=19% Similarity=0.271 Sum_probs=45.0
Q ss_pred CChhhHHHHHHHhhh-hccchhhHHHHHHHHHHHHhcCCCHHHHHHHHHHHccC
Q 001887 750 GSQEDEDAAMKSLAA-IELDDRHLKETVISHFMTKFEKLSEDELSDMKKQLLLG 802 (1000)
Q Consensus 750 gs~eD~~~Al~~Ls~-i~~~~~~~~e~~~~~~~~~~~~~~e~e~~~i~~qll~~ 802 (1000)
++++.=-.+|+.|.. +.++.+.+++|-|...+++|.+-++.|...+.+.|+..
T Consensus 18 ~~~~~~l~~L~~L~~~~~it~d~L~~T~iG~~Vn~LRkh~~~~v~~lAk~Lv~~ 71 (77)
T d1eo0a_ 18 SNDAAVLEILHVLDKEFVPTEKLLRETKVGVEVNKFKKSTNVEISKLVKKMISS 71 (77)
T ss_dssp SSSHHHHHHHHHHTTTCSCSTTHHHHHHHHHHHHHCCSSSCTTHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCcHHHHHHCCccHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 344555678889985 89999999999999999999998888999999988753
No 27
>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=27.88 E-value=3.8e+02 Score=28.91 Aligned_cols=98 Identities=10% Similarity=0.082 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHhhccc-CCCchHHHHHHHHHhhcCCCccchhhhHHHHHHH-HHHHhhcCCcccccccCcHHHHHHHH
Q 001887 422 ADLQYSLENCISWLSKKV-GDVGPILDVMAGVLENMSNNTVVARTTISAVHRT-AQIISTIPNISYRNKAFPEALFHQLL 499 (1000)
Q Consensus 422 ~~Lq~aL~~CIg~LA~hV-~da~qI~DMmavmLenis~~~~~ar~tvsa~y~t-a~i~a~~pn~sy~~kaFP~all~qLL 499 (1000)
..+..++...+..++.++ ++++++...+.-++.+..+.+...+. +...+.+ +.++.......+ ..+-+.++ |++
T Consensus 571 ~~ll~~l~~ii~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~-~~~~~e~l~~l~~~~~~~~~--~~l~~~l~-p~i 646 (959)
T d1wa5c_ 571 EFLMRSIFRVLQTSEDSIQPLFPQLLAQFIEIVTIMAKNPSNPRF-THYTFESIGAILNYTQRQNL--PLLVDSMM-PTF 646 (959)
T ss_dssp HHHHHHHHHHHHHHTTTTGGGHHHHHHHHHHHHHHHTTSCCCHHH-HHHHHHHHHHHHHTSCGGGH--HHHHHHHH-HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccchHH-HHHHHHHHHHHHHhcCchhH--HHHHHHHH-HHH
Confidence 346677777777777776 78888888888888888776543332 2223332 222211110000 11222233 333
Q ss_pred HHhc-CCCchhhHHHHHHHHHhhcC
Q 001887 500 LAMA-HPDHETRVGAHTVLSVVLMP 523 (1000)
Q Consensus 500 ~am~-~pD~e~Rl~a~~If~~lL~p 523 (1000)
..++ ....+..-.+.+++..++.-
T Consensus 647 ~~~~~~~~~~~~~~~~~l~~~~~~~ 671 (959)
T d1wa5c_ 647 LTVFSEDIQEFIPYVFQIIAFVVEQ 671 (959)
T ss_dssp HHHHHTTCTTTHHHHHHHHHHHHHH
T ss_pred HHHHhccchhHHHHHHHHHHHHHHh
Confidence 3333 33444555677888777643
No 28
>d1szaa_ a.118.9.4 (A:) PCF11 protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=27.29 E-value=30 Score=31.29 Aligned_cols=85 Identities=13% Similarity=0.158 Sum_probs=56.7
Q ss_pred hhhhhhhccccCCCCCCCCChhhhhHHHHHHhhCCCChhhhHHHHHHHHHHHHhhhcCCceeeHHHHHHHHHHhcccc-c
Q 001887 31 KRYKKMLADIFPRNQDAEPNDRKIGKLCEYASKNPLRIPKITTLLEQRCYKDLRNENFGSVKVVVCIYKKFLSSCKEQ-M 109 (1000)
Q Consensus 31 kRykkLV~~iyP~~p~~~Pn~~~lsKL~~Ya~s~P~KL~KIg~yLekR~~kDl~r~r~G~V~V~l~i~~~Ll~~C~~~-l 109 (1000)
..|...+.++. .+....|..|+.+|..|..--..|...+++++.+.--.++.+. |-.++..+..|+.+ .
T Consensus 10 ~~f~~~L~~L~------~ns~~~I~~Lt~~a~~~~~~a~~Iv~~i~~~i~~~~~~~KL~~----LYLiddI~~n~~~~y~ 79 (144)
T d1szaa_ 10 KDFNSILEELT------FNSRPIITTLTKLAEENISCAQYFVDAIESRIEKCMPKQKLYA----FYALDSICKNVGSPYT 79 (144)
T ss_dssp HHHHHHHTTCS------SCCHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHSCHHHHHHH----HHHHHHHHHHTCTTHH
T ss_pred HHHHHHHHHHh------hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhh----hhhHHHHHHHhHHHHH
Confidence 45666665551 1346689999999999999999999999998766444444443 44566777778755 5
Q ss_pred CcchhhHHHHHHHHHh
Q 001887 110 PLFASSLLGIIRTLLE 125 (1000)
Q Consensus 110 ~LFa~s~L~Ii~~LL~ 125 (1000)
++|.+.+-.++...-.
T Consensus 80 ~~f~~~l~~~f~~~y~ 95 (144)
T d1szaa_ 80 IYFSRNLFNLYKRTYL 95 (144)
T ss_dssp HHHHTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5555555555544433
No 29
>d1x9fd_ a.1.1.2 (D:) Extracellular dodecameric hemoglobin (erythrocruorin), subunit D1 {Common earthworm (Lumbricus terrestris) [TaxId: 6398]}
Probab=26.14 E-value=58 Score=28.61 Aligned_cols=42 Identities=17% Similarity=0.188 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHhhhcCCc----eeeHHHHHHHHHHhcccccCcch
Q 001887 72 TTLLEQRCYKDLRNENFGS----VKVVVCIYKKFLSSCKEQMPLFA 113 (1000)
Q Consensus 72 g~yLekR~~kDl~r~r~G~----V~V~l~i~~~Ll~~C~~~l~LFa 113 (1000)
|.++|+..-|+-|+.=+|+ +.++..+|.+|...+|+-..+|-
T Consensus 2 ~~~~e~~~vk~sW~~v~~~~~~~~~~G~~~f~~lF~~~P~~~~~F~ 47 (140)
T d1x9fd_ 2 CLVTESLKVKLQWASAFGHAHERVAFGLELWRDIIDDHPEIKAPFS 47 (140)
T ss_dssp CCHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHCGGGGGGGG
T ss_pred CCHHHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHHHhHHHHHhcc
Confidence 3578999999999876553 56899999999999999999994
No 30
>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=22.08 E-value=1e+02 Score=33.92 Aligned_cols=141 Identities=13% Similarity=0.145 Sum_probs=84.9
Q ss_pred hhHHHHHHHHHHHHhhhcCCceeeHHHHHHHHHHhcccccCcchhhHHHHHHHHHhccCCcceeehhHhHHHHHHhcCCc
Q 001887 70 KITTLLEQRCYKDLRNENFGSVKVVVCIYKKFLSSCKEQMPLFASSLLGIIRTLLEQTRQEEMQILGCGTLVNFIDSQTD 149 (1000)
Q Consensus 70 KIg~yLekR~~kDl~r~r~G~V~V~l~i~~~Ll~~C~~~l~LFa~s~L~Ii~~LL~qs~~~~l~i~a~~tf~~F~~~q~D 149 (1000)
-+..+|.+-+..++.........+...++..+-.-|....+-+.+.++..+-.+|. +.++..+..||.++..|+....+
T Consensus 451 ~~~~~l~~~v~~~l~~~~~~~~~lr~~~~~~i~~~~~~~~~~~~~~~~~~l~~~L~-~~~~~V~~~a~~al~~~~~~~~~ 529 (959)
T d1wa5c_ 451 NVVDFFTKEIAPDLTSNNIPHIILRVDAIKYIYTFRNQLTKAQLIELMPILATFLQ-TDEYVVYTYAAITIEKILTIRES 529 (959)
T ss_dssp CHHHHHHHHTHHHHHCSSCSCHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTCBSC
T ss_pred hHHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhC-CCchhHHHHHHHHHHHHHHhhcc
Confidence 35666666666677665544443444444444444544344445566666666666 56777788899999999875433
Q ss_pred h----------hhHHhhhhHHHHHHHHhHhcCchHHHHHHHHHHHHHHHHhHhhhccccccccccchHHHHHHh
Q 001887 150 G----------TYMFNLEGLIPKLCQLAQEMGNDERALRLRSAGLQVLAYMVKFMGEQSHMSMDFDKIISVTLE 213 (1000)
Q Consensus 150 ~----------~y~~~ye~fV~~f~~ma~~~~~de~~~rlR~AGLqAL~~vV~~~~e~shis~q~D~IVpvILe 213 (1000)
. .....++.++..+................+..-+.+|..++...++ ++...++.+++.+..
T Consensus 530 ~~~~~~~~~~~~l~p~l~~ll~~L~~~l~~~~~~~~~~~~~~~ll~~l~~ii~~~~~--~~~~~~~~i~~~l~~ 601 (959)
T d1wa5c_ 530 NTSPAFIFHKEDISNSTEILLKNLIALILKHGSSPEKLAENEFLMRSIFRVLQTSED--SIQPLFPQLLAQFIE 601 (959)
T ss_dssp SSSCCBSSCGGGTTTTHHHHHHHHHHHHHTTCCCHHHHTSCHHHHHHHHHHHHHHTT--TTGGGHHHHHHHHHH
T ss_pred cccchhhccHHHHHhhHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence 2 1223456777777777765554443344445678899999887764 333445555554443
No 31
>d1sopa_ g.71.1.1 (A:) Mini-collagen I, C-terminal domain {Hydra sp. [TaxId: 6086]}
Probab=20.76 E-value=17 Score=23.65 Aligned_cols=13 Identities=38% Similarity=1.145 Sum_probs=8.5
Q ss_pred cccCCccccccCCCc
Q 001887 9 LPVCGNLCFFCPSMR 23 (1000)
Q Consensus 9 ~p~c~~~C~cCpalR 23 (1000)
.|-|+ =+|||+.|
T Consensus 11 vptcp--qyccpakr 23 (26)
T d1sopa_ 11 VPTCP--QYCCPAKR 23 (26)
T ss_dssp CTTSC--STTCCSSC
T ss_pred cCCCc--cccCcccc
Confidence 45554 36899876
No 32
>d1q1fa_ a.1.1.2 (A:) Neuroglobin {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.42 E-value=2.5e+02 Score=24.05 Aligned_cols=110 Identities=9% Similarity=0.047 Sum_probs=58.0
Q ss_pred HHHHHHHHhhhcC-CceeeHHHHHHHHHHhcccccCcch----------------------hhHHHHHHHHHhccCCcce
Q 001887 76 EQRCYKDLRNENF-GSVKVVVCIYKKFLSSCKEQMPLFA----------------------SSLLGIIRTLLEQTRQEEM 132 (1000)
Q Consensus 76 ekR~~kDl~r~r~-G~V~V~l~i~~~Ll~~C~~~l~LFa----------------------~s~L~Ii~~LL~qs~~~~l 132 (1000)
|+++-++-|+.=. ....++..+|.+|+..+|+-.++|- ..++..|..++++-.+++-
T Consensus 3 ek~li~~sW~~v~~~~~~~g~~~f~~lF~~~P~~k~~F~~~~~~~~~~~~~~~~~~~~~H~~~v~~~l~~~i~~ldd~~~ 82 (148)
T d1q1fa_ 3 ESELIRQSWRVVSRSPLEHGTVLFARLFALEPSLLPLFQYNGRQFSSPEDSLSSPEFLDHIRKVMLVIDAAVTNVEDLSS 82 (148)
T ss_dssp SHHHHHHHHHHHHTSHHHHHHHHHHHHHHHCGGGGGGCCBTTBCCSSHHHHTTCHHHHHHHHHHHHHHHHHHHTSSCSSS
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHCHHHHHHHHHhccccCcHHHHhcCHHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 3455555555421 2346889999999999999888882 1256667777763223221
Q ss_pred -----eehhHhHHHHHHhcCCchhhHHhh-hhHHHHHHHHhHhcCchHHHHHHHHHHHHHHHHh
Q 001887 133 -----QILGCGTLVNFIDSQTDGTYMFNL-EGLIPKLCQLAQEMGNDERALRLRSAGLQVLAYM 190 (1000)
Q Consensus 133 -----~i~a~~tf~~F~~~q~D~~y~~~y-e~fV~~f~~ma~~~~~de~~~rlR~AGLqAL~~v 190 (1000)
+.+|..- ...+.+.+|...+ +-|+..+.+.....-.++....|+.. +..|..+
T Consensus 83 l~~~l~~lg~~H----~~~gv~~~~f~~~~~~l~~~l~~~lg~~~t~e~~~AW~~~-~~~i~~~ 141 (148)
T d1q1fa_ 83 LEEYLTSLGRKH----RAVGVRLSSFSTVGESLLYMLEKSLGPDFTPATRTAWSRL-YGAVVQA 141 (148)
T ss_dssp SHHHHHHHHHHH----HHHTCCTTHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHH-HHHHHHH
T ss_pred HHHHHHHHHHhh----ccCCCcHHHHHHHHHHHHHHHHHHccccCCHHHHHHHHHH-HHHHHHH
Confidence 1122211 1225566664444 33343333333222234666677653 4444443
Done!