Query 001888
Match_columns 1000
No_of_seqs 386 out of 3338
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 03:17:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001888.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001888hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ixz_A Potassium-transporting 100.0 8.2E-87 2.8E-91 844.3 64.9 726 58-954 246-1027(1034)
2 3ar4_A Sarcoplasmic/endoplasmi 100.0 1.5E-86 5E-91 841.4 55.7 739 58-950 202-992 (995)
3 2zxe_A Na, K-ATPase alpha subu 100.0 4E-85 1.4E-89 827.2 53.0 724 58-950 241-1017(1028)
4 1mhs_A Proton pump, plasma mem 100.0 1.9E-77 6.6E-82 736.7 32.9 636 53-950 231-881 (920)
5 3b8c_A ATPase 2, plasma membra 100.0 1.1E-74 3.9E-79 713.4 -7.1 647 52-951 181-845 (885)
6 3rfu_A Copper efflux ATPase; a 100.0 1.4E-52 4.8E-57 507.4 31.1 411 53-747 277-695 (736)
7 3j09_A COPA, copper-exporting 100.0 1.5E-51 5.1E-56 502.8 36.7 413 47-747 251-675 (723)
8 3j08_A COPA, copper-exporting 100.0 1.5E-51 5E-56 495.9 34.1 413 47-747 173-597 (645)
9 2yj3_A Copper-transporting ATP 99.8 1.1E-25 3.8E-30 242.5 0.0 137 507-732 124-262 (263)
10 3a1c_A Probable copper-exporti 99.9 1.7E-21 5.9E-26 213.0 22.9 272 211-731 14-287 (287)
11 3skx_A Copper-exporting P-type 99.8 2.3E-19 7.7E-24 195.3 25.4 274 217-739 1-276 (280)
12 3gwi_A Magnesium-transporting 99.7 3.9E-19 1.3E-23 175.9 4.4 140 326-519 17-165 (170)
13 4fe3_A Cytosolic 5'-nucleotida 99.4 1.8E-13 6.1E-18 150.0 5.6 143 517-719 139-292 (297)
14 3mn1_A Probable YRBI family ph 99.0 3.3E-10 1.1E-14 115.0 7.4 136 509-741 42-187 (189)
15 4dw8_A Haloacid dehalogenase-l 98.9 2.5E-10 8.6E-15 123.6 3.4 69 656-725 197-275 (279)
16 3mpo_A Predicted hydrolase of 98.9 9.2E-10 3.1E-14 119.2 5.4 68 656-724 197-274 (279)
17 3dnp_A Stress response protein 98.8 1.2E-09 4.1E-14 119.0 4.3 74 655-729 201-284 (290)
18 3dao_A Putative phosphatse; st 98.8 5.8E-09 2E-13 113.1 8.3 57 655-712 210-270 (283)
19 3n07_A 3-deoxy-D-manno-octulos 98.8 3.9E-09 1.3E-13 107.2 6.0 95 527-711 60-158 (195)
20 1k1e_A Deoxy-D-mannose-octulos 98.8 1.1E-08 3.8E-13 102.7 9.3 128 520-738 36-173 (180)
21 3n28_A Phosphoserine phosphata 98.8 6.9E-09 2.4E-13 115.5 7.6 149 519-741 178-333 (335)
22 3ewi_A N-acylneuraminate cytid 98.8 1.1E-08 3.8E-13 100.9 8.0 106 507-711 30-141 (168)
23 1l6r_A Hypothetical protein TA 98.7 6E-09 2.1E-13 108.9 5.1 175 517-712 20-212 (227)
24 3ij5_A 3-deoxy-D-manno-octulos 98.7 2.6E-08 8.8E-13 102.5 9.4 107 510-712 73-183 (211)
25 3mmz_A Putative HAD family hyd 98.7 2.7E-08 9.2E-13 99.4 9.2 114 510-720 36-159 (176)
26 2pq0_A Hypothetical conserved 98.7 8.1E-08 2.8E-12 102.4 11.8 56 656-712 183-242 (258)
27 3l7y_A Putative uncharacterize 98.7 3.1E-09 1E-13 116.6 0.6 58 655-713 227-288 (304)
28 3n1u_A Hydrolase, HAD superfam 98.6 2.7E-08 9.3E-13 100.8 7.2 116 528-730 55-176 (191)
29 3fzq_A Putative hydrolase; YP_ 98.6 1.1E-08 3.8E-13 110.1 3.3 58 655-713 199-260 (274)
30 3pgv_A Haloacid dehalogenase-l 98.6 8.4E-09 2.9E-13 112.0 2.0 52 655-707 208-263 (285)
31 2zos_A MPGP, mannosyl-3-phosph 98.6 5.7E-08 2E-12 103.0 7.5 57 655-711 178-239 (249)
32 1u02_A Trehalose-6-phosphate p 98.6 1E-07 3.5E-12 100.4 9.1 54 651-711 153-211 (239)
33 1rkq_A Hypothetical protein YI 98.5 2.3E-08 7.9E-13 108.3 3.5 60 651-711 191-256 (282)
34 3e8m_A Acylneuraminate cytidyl 98.5 1.2E-07 4E-12 93.5 7.6 108 527-725 39-156 (164)
35 3r4c_A Hydrolase, haloacid deh 98.5 1.1E-07 3.7E-12 102.1 7.4 57 655-712 193-253 (268)
36 4ap9_A Phosphoserine phosphata 98.5 1.1E-07 3.7E-12 96.6 6.9 117 519-718 79-195 (201)
37 1svj_A Potassium-transporting 98.5 5.3E-07 1.8E-11 86.9 10.4 107 352-522 49-156 (156)
38 1l7m_A Phosphoserine phosphata 98.5 3E-07 1E-11 94.1 8.8 125 519-716 76-207 (211)
39 2b30_A Pvivax hypothetical pro 98.4 3.5E-08 1.2E-12 107.8 1.5 55 656-711 224-283 (301)
40 1rlm_A Phosphatase; HAD family 98.4 2.2E-07 7.4E-12 99.9 6.0 57 655-712 190-250 (271)
41 3kd3_A Phosphoserine phosphohy 98.4 7.9E-07 2.7E-11 91.3 9.2 130 519-719 82-218 (219)
42 2r8e_A 3-deoxy-D-manno-octulos 98.4 6.2E-07 2.1E-11 90.5 8.0 97 526-712 60-160 (188)
43 1y8a_A Hypothetical protein AF 98.3 3.6E-07 1.2E-11 101.3 6.6 75 654-732 205-291 (332)
44 3m1y_A Phosphoserine phosphata 98.3 5.1E-07 1.7E-11 93.0 6.6 128 518-718 74-208 (217)
45 1nf2_A Phosphatase; structural 98.3 1E-07 3.5E-12 102.3 1.2 55 656-711 190-248 (268)
46 3m9l_A Hydrolase, haloacid deh 98.3 1.3E-06 4.5E-11 89.2 9.3 129 518-724 69-200 (205)
47 4ex6_A ALNB; modified rossman 98.3 8.9E-07 3.1E-11 92.5 7.6 129 518-723 103-235 (237)
48 3zx4_A MPGP, mannosyl-3-phosph 98.3 1.9E-06 6.5E-11 91.8 10.0 53 655-711 175-233 (259)
49 1wr8_A Phosphoglycolate phosph 98.3 1.7E-06 5.8E-11 90.5 9.5 180 518-713 19-213 (231)
50 3p96_A Phosphoserine phosphata 98.2 1.9E-06 6.4E-11 98.7 9.8 135 519-726 256-396 (415)
51 2rbk_A Putative uncharacterize 98.2 7.9E-07 2.7E-11 94.9 5.7 62 656-718 187-254 (261)
52 1te2_A Putative phosphatase; s 98.2 3.5E-06 1.2E-10 86.9 9.7 123 519-718 94-220 (226)
53 4eze_A Haloacid dehalogenase-l 98.2 1.8E-06 6.1E-11 94.7 7.7 127 519-718 179-312 (317)
54 1nrw_A Hypothetical protein, h 98.2 2.3E-06 8E-11 92.7 8.6 57 656-713 216-276 (288)
55 3mc1_A Predicted phosphatase, 98.2 4.1E-06 1.4E-10 86.6 9.8 120 518-719 85-214 (226)
56 1xvi_A MPGP, YEDP, putative ma 98.1 8.1E-06 2.8E-10 87.7 10.3 49 507-558 17-65 (275)
57 1s2o_A SPP, sucrose-phosphatas 98.1 1.3E-06 4.4E-11 92.2 3.7 56 656-712 162-228 (244)
58 1rku_A Homoserine kinase; phos 98.1 1.5E-05 5.1E-10 81.3 10.9 126 519-719 69-196 (206)
59 2pib_A Phosphorylated carbohyd 98.1 6.8E-06 2.3E-10 83.9 8.4 124 519-719 84-212 (216)
60 3sd7_A Putative phosphatase; s 98.0 6.2E-06 2.1E-10 86.4 7.9 120 518-719 109-239 (240)
61 3s6j_A Hydrolase, haloacid deh 98.0 5.3E-06 1.8E-10 86.1 6.9 126 518-719 90-219 (233)
62 1nnl_A L-3-phosphoserine phosp 98.0 7.7E-06 2.6E-10 84.7 7.8 126 519-718 86-222 (225)
63 3fvv_A Uncharacterized protein 98.0 1.1E-05 3.9E-10 83.8 9.1 41 519-559 92-132 (232)
64 2p9j_A Hypothetical protein AQ 98.0 7E-06 2.4E-10 80.4 6.9 109 520-714 37-145 (162)
65 2go7_A Hydrolase, haloacid deh 98.0 7E-06 2.4E-10 83.1 7.0 118 519-718 85-203 (207)
66 3d6j_A Putative haloacid dehal 98.0 9E-06 3.1E-10 83.7 7.2 41 519-559 89-129 (225)
67 3e58_A Putative beta-phosphogl 98.0 1.1E-05 3.8E-10 82.2 7.7 124 519-718 89-213 (214)
68 2hsz_A Novel predicted phospha 97.9 1.2E-05 4.1E-10 84.6 7.7 125 518-718 113-241 (243)
69 3umb_A Dehalogenase-like hydro 97.9 1.2E-05 4.2E-10 83.4 7.7 126 518-719 98-226 (233)
70 3um9_A Haloacid dehalogenase, 97.9 1.5E-05 5.2E-10 82.5 8.2 126 518-719 95-223 (230)
71 2nyv_A Pgpase, PGP, phosphogly 97.9 1.7E-05 5.7E-10 82.2 8.2 125 518-719 82-208 (222)
72 2fue_A PMM 1, PMMH-22, phospho 97.9 4.8E-06 1.6E-10 88.8 4.1 55 656-711 197-257 (262)
73 3f9r_A Phosphomannomutase; try 97.9 5.1E-06 1.8E-10 87.6 4.1 43 656-698 187-234 (246)
74 3nas_A Beta-PGM, beta-phosphog 97.9 1.7E-05 5.7E-10 82.5 7.6 118 519-716 92-209 (233)
75 3kzx_A HAD-superfamily hydrola 97.9 3.1E-05 1.1E-09 80.3 9.2 121 519-719 103-225 (231)
76 2om6_A Probable phosphoserine 97.8 3.2E-05 1.1E-09 80.1 8.9 125 519-719 99-229 (235)
77 2wf7_A Beta-PGM, beta-phosphog 97.8 1.3E-05 4.5E-10 82.3 5.6 47 668-716 162-208 (221)
78 1swv_A Phosphonoacetaldehyde h 97.8 1.6E-05 5.3E-10 84.8 6.0 40 519-558 103-142 (267)
79 3nuq_A Protein SSM1, putative 97.8 2E-05 7E-10 84.7 6.9 128 519-718 142-277 (282)
80 2amy_A PMM 2, phosphomannomuta 97.8 2E-05 6.8E-10 83.1 6.3 52 656-708 188-245 (246)
81 3l8h_A Putative haloacid dehal 97.8 3.9E-05 1.3E-09 76.3 8.1 61 660-720 110-176 (179)
82 4gxt_A A conserved functionall 97.8 1.9E-05 6.5E-10 88.5 6.3 41 518-558 220-260 (385)
83 2no4_A (S)-2-haloacid dehaloge 97.8 5.3E-05 1.8E-09 79.1 9.5 124 519-719 105-232 (240)
84 2hcf_A Hydrolase, haloacid deh 97.8 3.7E-05 1.3E-09 79.8 7.8 41 519-559 93-134 (234)
85 3u26_A PF00702 domain protein; 97.7 6.6E-05 2.3E-09 77.8 9.4 123 519-719 100-226 (234)
86 1zrn_A L-2-haloacid dehalogena 97.7 4E-05 1.4E-09 79.6 7.6 124 519-718 95-221 (232)
87 3ddh_A Putative haloacid dehal 97.7 9.5E-05 3.3E-09 76.3 10.2 41 519-559 105-146 (234)
88 3iru_A Phoshonoacetaldehyde hy 97.7 3.8E-05 1.3E-09 82.0 6.8 41 519-559 111-151 (277)
89 2fea_A 2-hydroxy-3-keto-5-meth 97.7 5.1E-05 1.7E-09 79.3 7.0 137 519-719 77-215 (236)
90 4eek_A Beta-phosphoglucomutase 97.6 4E-05 1.4E-09 81.2 5.9 41 518-558 109-149 (259)
91 3qnm_A Haloacid dehalogenase-l 97.6 0.0001 3.4E-09 76.6 8.9 119 519-718 107-231 (240)
92 2ah5_A COG0546: predicted phos 97.6 9.8E-05 3.4E-09 75.5 8.5 117 519-718 84-208 (210)
93 3dv9_A Beta-phosphoglucomutase 97.6 6.2E-05 2.1E-09 78.8 6.3 125 518-719 107-237 (247)
94 2hoq_A Putative HAD-hydrolase 97.6 0.00021 7.3E-09 74.6 10.0 41 519-559 94-134 (241)
95 2hdo_A Phosphoglycolate phosph 97.5 3.6E-05 1.2E-09 78.5 3.7 122 519-718 83-207 (209)
96 3qxg_A Inorganic pyrophosphata 97.5 6.2E-05 2.1E-09 78.8 5.6 52 668-719 183-238 (243)
97 3ed5_A YFNB; APC60080, bacillu 97.5 0.00019 6.4E-09 74.5 9.1 120 519-719 103-230 (238)
98 2hi0_A Putative phosphoglycola 97.5 0.00016 5.4E-09 75.6 8.3 40 519-558 110-149 (240)
99 3l5k_A Protein GS1, haloacid d 97.5 4E-05 1.4E-09 80.6 3.5 50 669-719 191-243 (250)
100 3gyg_A NTD biosynthesis operon 97.5 0.00026 9E-09 76.3 9.6 57 656-713 211-271 (289)
101 1qq5_A Protein (L-2-haloacid d 97.5 0.0002 6.7E-09 75.5 8.3 39 519-559 93-131 (253)
102 2gmw_A D,D-heptose 1,7-bisphos 97.4 0.00023 8E-09 72.8 7.8 60 660-719 140-203 (211)
103 2w43_A Hypothetical 2-haloalka 97.4 0.00024 8E-09 71.9 7.5 121 518-718 73-196 (201)
104 3smv_A S-(-)-azetidine-2-carbo 97.4 0.00024 8.4E-09 73.5 7.3 52 668-719 172-234 (240)
105 3umg_A Haloacid dehalogenase; 97.3 0.00022 7.4E-09 74.8 6.7 120 519-721 116-248 (254)
106 2qlt_A (DL)-glycerol-3-phospha 97.3 0.00022 7.6E-09 76.3 6.8 40 519-558 114-154 (275)
107 3k1z_A Haloacid dehalogenase-l 97.3 0.00023 8E-09 75.5 6.5 124 519-719 106-235 (263)
108 3umc_A Haloacid dehalogenase; 97.3 0.00024 8.1E-09 74.6 6.4 122 519-719 120-250 (254)
109 3pdw_A Uncharacterized hydrola 97.3 0.00042 1.4E-08 73.7 8.0 43 518-560 21-66 (266)
110 2pke_A Haloacid delahogenase-l 97.3 0.0011 3.6E-08 69.6 11.0 39 519-558 112-150 (251)
111 2fdr_A Conserved hypothetical 97.2 0.0002 6.8E-09 73.8 5.0 52 668-719 160-219 (229)
112 3qgm_A P-nitrophenyl phosphata 97.1 0.00069 2.4E-08 72.0 7.9 44 517-560 22-68 (268)
113 2fi1_A Hydrolase, haloacid deh 97.1 0.00065 2.2E-08 67.7 7.1 38 520-558 83-120 (190)
114 3ib6_A Uncharacterized protein 97.1 0.0027 9.1E-08 63.5 11.6 41 519-559 34-77 (189)
115 2wm8_A MDP-1, magnesium-depend 97.1 0.00056 1.9E-08 68.4 6.5 41 519-559 68-109 (187)
116 2o2x_A Hypothetical protein; s 96.9 0.00078 2.7E-08 69.2 5.9 29 518-546 55-83 (218)
117 2x4d_A HLHPP, phospholysine ph 96.7 0.024 8.1E-07 59.6 15.8 40 520-559 33-75 (271)
118 3epr_A Hydrolase, haloacid deh 96.7 0.0037 1.3E-07 66.2 9.2 42 519-561 22-66 (264)
119 3vay_A HAD-superfamily hydrola 96.7 0.0023 7.9E-08 65.7 7.0 60 660-719 164-226 (230)
120 1vjr_A 4-nitrophenylphosphatas 96.5 0.012 4E-07 62.4 11.6 49 507-559 25-76 (271)
121 2c4n_A Protein NAGD; nucleotid 96.5 0.0064 2.2E-07 63.0 9.4 41 519-559 19-62 (250)
122 2gfh_A Haloacid dehalogenase-l 96.5 0.0053 1.8E-07 64.9 8.3 124 519-719 121-249 (260)
123 3cnh_A Hydrolase family protei 96.4 0.0015 5.1E-08 65.7 3.7 40 519-559 86-125 (200)
124 3kbb_A Phosphorylated carbohyd 96.4 0.0065 2.2E-07 61.8 8.4 42 519-560 84-125 (216)
125 2i6x_A Hydrolase, haloacid deh 96.4 0.0011 3.7E-08 67.3 2.3 36 519-555 89-124 (211)
126 2pr7_A Haloacid dehalogenase/e 96.3 0.00091 3.1E-08 62.6 1.3 41 518-558 17-57 (137)
127 2oda_A Hypothetical protein ps 96.2 0.0094 3.2E-07 59.9 7.8 34 519-552 36-69 (196)
128 4gib_A Beta-phosphoglucomutase 95.9 0.0086 2.9E-07 62.7 6.5 118 517-715 114-232 (250)
129 2kmv_A Copper-transporting ATP 95.9 0.067 2.3E-06 52.8 12.4 53 424-519 133-185 (185)
130 3pct_A Class C acid phosphatas 95.8 0.014 4.8E-07 60.8 7.1 43 517-559 99-145 (260)
131 1qyi_A ZR25, hypothetical prot 95.6 0.016 5.4E-07 64.6 7.4 42 519-560 215-256 (384)
132 2b0c_A Putative phosphatase; a 95.6 0.0011 3.8E-08 66.9 -1.8 30 519-548 91-120 (206)
133 3ocu_A Lipoprotein E; hydrolas 95.6 0.013 4.6E-07 61.1 6.0 43 517-559 99-145 (262)
134 3nvb_A Uncharacterized protein 95.3 0.019 6.6E-07 63.4 6.7 35 521-555 258-292 (387)
135 2zg6_A Putative uncharacterize 95.2 0.023 7.7E-07 58.0 6.6 40 519-559 95-134 (220)
136 4dcc_A Putative haloacid dehal 95.0 0.0088 3E-07 61.5 2.6 35 519-554 112-146 (229)
137 2ho4_A Haloacid dehalogenase-l 94.9 0.2 6.8E-06 52.1 13.0 62 658-719 182-254 (259)
138 2oyc_A PLP phosphatase, pyrido 94.9 0.1 3.5E-06 56.2 10.8 43 517-559 35-80 (306)
139 1ltq_A Polynucleotide kinase; 94.8 0.022 7.6E-07 61.4 5.3 32 517-548 186-217 (301)
140 2fpr_A Histidine biosynthesis 94.7 0.013 4.5E-07 57.7 2.9 41 519-559 42-97 (176)
141 2p11_A Hypothetical protein; p 94.6 0.059 2E-06 55.4 7.5 40 518-558 95-134 (231)
142 2i33_A Acid phosphatase; HAD s 94.5 0.042 1.4E-06 57.7 6.1 43 517-559 99-144 (258)
143 2hc8_A PACS, cation-transporti 94.3 0.027 9.3E-07 50.7 3.6 46 46-92 51-103 (113)
144 4as2_A Phosphorylcholine phosp 93.9 0.032 1.1E-06 60.7 3.8 41 516-556 140-180 (327)
145 1yns_A E-1 enzyme; hydrolase f 93.4 0.11 3.7E-06 54.7 7.0 39 518-556 129-167 (261)
146 2kij_A Copper-transporting ATP 93.1 0.03 1E-06 51.4 1.8 38 53-91 75-114 (124)
147 1yv9_A Hydrolase, haloacid deh 92.3 0.28 9.6E-06 51.3 8.2 42 518-559 20-65 (264)
148 1zjj_A Hypothetical protein PH 91.9 0.58 2E-05 48.9 10.1 43 517-559 15-60 (263)
149 4g9b_A Beta-PGM, beta-phosphog 90.9 0.2 7E-06 51.8 5.2 41 518-560 94-134 (243)
150 2b82_A APHA, class B acid phos 90.7 0.12 4E-06 52.5 3.0 29 520-548 89-117 (211)
151 2obb_A Hypothetical protein; s 89.9 0.29 1E-05 45.8 4.7 40 520-559 25-67 (142)
152 2arf_A Wilson disease ATPase; 88.0 4.1 0.00014 39.1 11.7 16 352-367 36-51 (165)
153 4fe3_A Cytosolic 5'-nucleotida 86.7 0.22 7.6E-06 53.3 2.0 35 210-245 16-59 (297)
154 3i28_A Epoxide hydrolase 2; ar 81.3 1.1 3.6E-05 52.1 4.7 26 519-544 100-125 (555)
155 3zvl_A Bifunctional polynucleo 80.6 1.5 5E-05 49.4 5.4 26 520-545 88-113 (416)
156 3bwv_A Putative 5'(3')-deoxyri 78.3 3.8 0.00013 39.6 7.1 25 519-544 69-93 (180)
157 2g80_A Protein UTR4; YEL038W, 76.4 2.9 9.8E-05 43.4 5.8 35 518-556 124-158 (253)
158 2hhl_A CTD small phosphatase-l 72.3 0.95 3.2E-05 45.0 0.7 42 517-559 66-107 (195)
159 2ght_A Carboxy-terminal domain 70.2 1.3 4.4E-05 43.5 1.1 41 518-559 54-94 (181)
160 1xpj_A Hypothetical protein; s 67.7 2.6 8.9E-05 38.4 2.6 30 519-548 24-53 (126)
161 2i7d_A 5'(3')-deoxyribonucleot 59.7 2.7 9.4E-05 41.2 1.2 41 518-558 72-113 (193)
162 1q92_A 5(3)-deoxyribonucleotid 49.7 5.5 0.00019 39.1 1.5 40 519-558 75-115 (197)
163 2hx1_A Predicted sugar phospha 46.4 16 0.00054 38.1 4.6 43 517-559 28-73 (284)
164 3kc2_A Uncharacterized protein 44.7 18 0.00062 39.3 4.8 47 512-558 22-72 (352)
165 1ccw_A Protein (glutamate muta 41.4 55 0.0019 29.9 6.9 81 453-558 25-113 (137)
166 3n28_A Phosphoserine phosphata 41.4 15 0.00051 39.5 3.5 48 513-560 37-95 (335)
167 2l82_A Designed protein OR32; 29.4 2.6E+02 0.009 23.7 10.2 17 449-465 16-32 (162)
168 2yxb_A Coenzyme B12-dependent 27.2 77 0.0026 29.8 5.5 80 454-558 41-122 (161)
169 2i2x_B MTAC, methyltransferase 24.4 1.2E+02 0.0043 30.9 6.9 78 454-558 146-224 (258)
170 3ezx_A MMCP 1, monomethylamine 24.1 63 0.0022 32.1 4.4 78 454-558 115-197 (215)
171 1nnx_A Protein YGIW; structura 22.4 28 0.00095 30.6 1.1 31 211-241 35-65 (109)
172 2hx1_A Predicted sugar phospha 20.3 1.1E+02 0.0037 31.5 5.6 65 650-714 203-282 (284)
173 1vp8_A Hypothetical protein AF 20.1 3.6E+02 0.012 26.1 8.3 82 449-557 33-120 (201)
No 1
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=100.00 E-value=8.2e-87 Score=844.26 Aligned_cols=726 Identities=18% Similarity=0.189 Sum_probs=554.3
Q ss_pred cCCCCCeEEeceeecCCCeEEEEEEEecchh---hHhhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 001888 58 PLSPQQILLRDSKLKNTDYVYGVVVFTGHDT---KVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIET 134 (1000)
Q Consensus 58 ~l~~~n~l~~Gs~l~~tg~~~g~Vv~tG~~T---ki~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~ 134 (1000)
|++.+|++|+||.+.+ |.+.|+|++||.+| |+..+....+.+++|+++.+++++..+..+.++++++.++++.++.
T Consensus 246 ~~~~~n~~f~GT~v~~-G~~~~vVv~tG~~T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 324 (1034)
T 3ixz_A 246 PLETRNIAFFSTMCLE-GTAQGLVVNTGDRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCIG 324 (1034)
T ss_pred ccccccceecceeEEe-ecceEEEEeehhhhHhhHHHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4456799999999996 99999999999999 5666667777889999999999999998888888877766543321
Q ss_pred ccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHHhHHHhhcccccccccCCCc
Q 001888 135 KRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKP 214 (1000)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~ 214 (1000)
. .| ...+..++.+++.+||++||++++++.++++. +| ++++
T Consensus 325 ~---------~~--------------------~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~------rm----ak~~ 365 (1034)
T 3ixz_A 325 Y---------TF--------------------LRAMVFFMAIVVAYVPEGLLATVTVCLSLTAK------RL----ASKN 365 (1034)
T ss_pred c---------hH--------------------HHHHHHHHHHHHheeccccHHHHHHHHHHHHH------HH----hhCC
Confidence 1 12 34678889999999999999999999999988 66 8899
Q ss_pred ceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcccccCCCCCCCCCCCCccc
Q 001888 215 ARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIV 294 (1000)
Q Consensus 215 ~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (1000)
++||+++++|+||++++||||||||||+|+|+|+++++++..|..+....
T Consensus 366 ~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~------------------------------ 415 (1034)
T 3ixz_A 366 CVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTED------------------------------ 415 (1034)
T ss_pred eEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCccc------------------------------
Confidence 99999999999999999999999999999999999999887654321000
Q ss_pred cCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCC--ceEEeeCChhHHHHHHHHHHcCcEEE
Q 001888 295 ESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETG--EISYEAESPDEAAFVIAAREVGFQFF 372 (1000)
Q Consensus 295 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~--~~~~~~~sp~e~al~~~a~~~g~~~~ 372 (1000)
..+. ..+...+..+.+++++++||++....+.+.. ......++|+|.|+++++...+....
T Consensus 416 -----~~~~------------~~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~ 478 (1034)
T 3ixz_A 416 -----QSGQ------------TFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAM 478 (1034)
T ss_pred -----cccc------------ccCcCCHHHHHHHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChH
Confidence 0000 0011234567899999999999875432211 11234589999999999988764321
Q ss_pred eecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcC---CCcEEEEEccchhHhHHHHhcc---------
Q 001888 373 GSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNP---ENQLLLLCKGADSVMFERLSKH--------- 440 (1000)
Q Consensus 373 ~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~~--------- 440 (1000)
. .+..|+++.++||+|+||||+++++.. ++++++|+|||||.|+++|+..
T Consensus 479 ~------------------~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l 540 (1034)
T 3ixz_A 479 G------------------YRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPL 540 (1034)
T ss_pred H------------------HHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeCChHHHHHHhHHhhcCCceecC
Confidence 1 256788999999999999999988754 3679999999999999999742
Q ss_pred ChhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeecccc
Q 001888 441 GQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKL 520 (1000)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~l 520 (1000)
+++.++.+.+.+++++.+|+|||++|||.++++++.++... ++ +..+.+|+||+|+|+++++||+
T Consensus 541 ~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~----------~~-----~~~~~~e~~l~~lGlv~i~Dp~ 605 (1034)
T 3ixz_A 541 DEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAF----------DV-----EAMNFPTSGLSFAGLVSMIDPP 605 (1034)
T ss_pred CHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhccccccc----------ch-----hhhhccccCcEEEEEEeccCCC
Confidence 34567788999999999999999999999988765443211 11 1124568999999999999999
Q ss_pred cCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHH
Q 001888 521 QKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIR 600 (1000)
Q Consensus 521 r~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (1000)
|++++++|++|+++||++||+|||+..||.++|+++|+..++...+ .. . .....
T Consensus 606 r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i---------~~------------~-----~~~~~ 659 (1034)
T 3ixz_A 606 RATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETV---------ED------------I-----AARLR 659 (1034)
T ss_pred chhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHH---------HH------------H-----HHhhC
Confidence 9999999999999999999999999999999999999976432100 00 0 00000
Q ss_pred hhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCccC
Q 001888 601 EGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGAND 680 (1000)
Q Consensus 601 ~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ND 680 (1000)
.... ..........+++|..+.....+++. +....++..+|+|++|+||.++|+.+++.|++|+|+|||.||
T Consensus 660 ~~~~----~~~~~~~~~~~~~g~~l~~~~~~~l~----~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND 731 (1034)
T 3ixz_A 660 VPVD----QVNRKDARACVINGMQLKDMDPSELV----EALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVND 731 (1034)
T ss_pred ccch----hccccccceeEEecHhhhhCCHHHHH----HHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHh
Confidence 0000 01112234568888888765544443 334455667999999999999999999899999999999999
Q ss_pred hHHhhhcCccccccCccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 001888 681 VGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFS 758 (1000)
Q Consensus 681 ~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~fs 758 (1000)
++||+.||+||||+++....+|++||+++.+ |..+..+ +.|||++|.|+++++.|.+++|+..+++.+++.++.
T Consensus 732 ~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~a-i~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~--- 807 (1034)
T 3ixz_A 732 SPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTG-VEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVS--- 807 (1034)
T ss_pred HHHHHHCCeeEEeCCccCHHHHHhcCEEeccCCchHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 9999999999999744455599999999998 4446666 889999999999999999999999999999988774
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHHHhcccCCChhhhhcCccchhccc-cCCccchhhHHHh-hHHHHHHHHHHHHHHHh
Q 001888 759 GRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGV-QNILFSWPRILGW-MSNGVLSAIIIFFFTTN 836 (1000)
Q Consensus 759 ~~~~~~~~~ll~~n~~~~~~p~~~~~~~~~~~~~~~~~~~P~ly~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 836 (1000)
...++.++|++|+|++++.+|+++++.++ ++++.|.+.|+ .+ +..+++.+.++.. +..|++++++.|+.+++
T Consensus 808 ~~~pl~~~qiL~inl~~d~~palal~~e~--~~~~~m~~~Pr----~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~ 881 (1034)
T 3ixz_A 808 VPLPLGCITILFIELCTDIFPSVSLAYEK--AESDIMHLRPR----NPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFT 881 (1034)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhcCC--CChhhhhCCCC----CCccccccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23469999999999999999999998864 34445555565 34 4678888877664 45588888777766655
Q ss_pred hhccccccC----------C-----------Ccc-------cchhhhhHHHHHHHHHHHHHHHHHHhhc-----c--hhH
Q 001888 837 SIFNQAFRK----------D-----------GHA-------VDYEVLGVAMYSSVVWAVNCQMALSINY-----F--TWI 881 (1000)
Q Consensus 837 ~~~~~~~~~----------~-----------g~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~~~-----~--~~~ 881 (1000)
.+....+.. . |.. .......++.|+++++.+.+..+. .++ | .++
T Consensus 882 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~-~r~~~~s~~~~~~~ 960 (1034)
T 3ixz_A 882 AMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADVLI-RKTRRLSAFQQGFF 960 (1034)
T ss_pred HHhhcCCccccccccccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHh-hccCCCcccccCCc
Confidence 432111100 0 000 001235688888888877666543 222 2 235
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 001888 882 QHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFRPMY 954 (1000)
Q Consensus 882 ~~~~~~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~~~~~~ll~~~i~k~~~~~~~p~~ 954 (1000)
.|.++|+++++.+++++++.++|. ++. +|++.++++..|+.++.++++.++.+++.|++.|++.+.-
T Consensus 961 ~N~~l~~~~~~~~~l~~~~~~~p~-~~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~e~~K~~~r~~~~~~ 1027 (1034)
T 3ixz_A 961 RNRILVIAIVFQVCIGCFLCYCPG-MPN-----IFNFMPIRFQWWLVPMPFGLLIFVYDEIRKLGVRCCPGSW 1027 (1034)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhh-HHH-----HhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 788889999999999888888883 333 6778899999999999999999999999999998875443
No 2
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=100.00 E-value=1.5e-86 Score=841.39 Aligned_cols=739 Identities=20% Similarity=0.224 Sum_probs=538.3
Q ss_pred cCCCCCeEEeceeecCCCeEEEEEEEecchhhH---hhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 001888 58 PLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIET 134 (1000)
Q Consensus 58 ~l~~~n~l~~Gs~l~~tg~~~g~Vv~tG~~Tki---~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~ 134 (1000)
+.+.+|++|+||.+.+ |+++|+|++||++|++ .+....++.+++|+++.+++++..+.++++++|++.++++..+.
T Consensus 202 ~~~~~~~v~~GT~v~~-G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (995)
T 3ar4_A 202 NQDKKNMLFSGTNIAA-GKALGIVATTGVSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHF 280 (995)
T ss_dssp GGGCTTEECTTCEEEE-CEEEEEEEECGGGSHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGG
T ss_pred cccccceEecCCEEEc-ceEEEEEEEcCcchHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4577899999999997 9999999999999965 45556677889999999999999999988888887766543211
Q ss_pred ccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHHhHHHhhcccccccccCCCc
Q 001888 135 KRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKP 214 (1000)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~ 214 (1000)
...... ..|+ ......|..++.+++.+|||+||++++++.++++. +| ++++
T Consensus 281 ~~~~~~---~~~~----------------~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~~~------~m----a~~~ 331 (995)
T 3ar4_A 281 NDPVHG---GSWI----------------RGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTR------RM----AKKN 331 (995)
T ss_dssp GSCSSS---SCHH----------------HHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHH------HH----HHTT
T ss_pred cccccc---chHH----------------HHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHH------Hh----ccCC
Confidence 100000 0121 12234566888999999999999999999998887 66 7789
Q ss_pred ceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcccccCCCCCCCCCCCCccc
Q 001888 215 ARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIV 294 (1000)
Q Consensus 215 ~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (1000)
+++|+++++|+||++++||||||||||+|+|+|+++++.+..++..... .....+.. .
T Consensus 332 ~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~--------~~~~~~~~---~----------- 389 (995)
T 3ar4_A 332 AIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSL--------NEFSITGS---T----------- 389 (995)
T ss_dssp EEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEE--------EEEEECCS---S-----------
T ss_pred cEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCccccc--------ceeeccCC---C-----------
Confidence 9999999999999999999999999999999999998865443210000 00000000 0
Q ss_pred cCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeCChhHHHHHHHHHHcCcEEEee
Q 001888 295 ESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGS 374 (1000)
Q Consensus 295 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~ 374 (1000)
..+ .... ...+.......++.++.++.++++||++.++.++..+... ..+||+|.||++++++.|+ +..
T Consensus 390 -~~p-~~~~------~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~-~~g~p~E~Al~~~a~~~g~-~~~- 458 (995)
T 3ar4_A 390 -YAP-EGEV------LKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYE-KVGEATETALTTLVEKMNV-FNT- 458 (995)
T ss_dssp -SSS-CCCE------EETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEE-EESCHHHHHHHHHHHHHCT-TCC-
T ss_pred -cCC-cccc------ccccccccccccHHHHHHHHHHHHcCCCcccccCCCCcee-ecCCccHHHHHHHHHHcCC-ccc-
Confidence 000 0000 0000001112334577899999999999875443223222 3489999999999999887 211
Q ss_pred cCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCC-----cEEEEEccchhHhHHHHhcc---------
Q 001888 375 SQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPEN-----QLLLLCKGADSVMFERLSKH--------- 440 (1000)
Q Consensus 375 ~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~-----~~~l~~KGa~~~i~~~~~~~--------- 440 (1000)
....+................|++++++||+|+||||||+++.++| ++.+|+||||+.|+++|+..
T Consensus 459 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l 538 (995)
T 3ar4_A 459 EVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPM 538 (995)
T ss_dssp CCTTSCTTTSTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEEC
T ss_pred cccccccccccccchhhhhhhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccC
Confidence 0000000000000000124579999999999999999999997665 68999999999999999752
Q ss_pred ChhhHHHHHHHHHHH--HHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeecc
Q 001888 441 GQQFEAETRRHINRY--AEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVED 518 (1000)
Q Consensus 441 ~~~~~~~~~~~~~~~--~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D 518 (1000)
+++.++++.++++++ +.+|+|||++|||+++.++. ...+ .+ ...++.+|+|++|+|+++++|
T Consensus 539 ~~~~~~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~----------~~~~-~~-----~~~~~~~e~~l~~lG~~~i~D 602 (995)
T 3ar4_A 539 TGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKRE----------EMVL-DD-----SSRFMEYETDLTFVGVVGMLD 602 (995)
T ss_dssp CHHHHHHHHHHHHHHHHSTTCCEEEEEEEESSCCCGG----------GCCT-TC-----GGGHHHHTCSEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHHhhhccceEEEEEEEecCcccc----------cccc-cc-----chhhhhhccCcEEEEEEeecC
Confidence 234567788899999 99999999999999864310 0000 01 013467799999999999999
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++|++++++|+.|+++||++||+|||+..||.++|+++|+...+..+ .
T Consensus 603 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i-----~--------------------------- 650 (995)
T 3ar4_A 603 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEV-----A--------------------------- 650 (995)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCC-----T---------------------------
T ss_pred CCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcc-----c---------------------------
Confidence 99999999999999999999999999999999999999997543210 0
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
..+++|.+++.+.++++.+.+ . +..+|||++|+||.++|+.+++.|+.|+|+|||.
T Consensus 651 ------------------~~~~~g~~~~~l~~~~~~~~~----~--~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ 706 (995)
T 3ar4_A 651 ------------------DRAYTGREFDDLPLAEQREAC----R--RACCFARVEPSHKSKIVEYLQSYDEITAMTGDGV 706 (995)
T ss_dssp ------------------TTEEEHHHHHTSCHHHHHHHH----H--HCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSG
T ss_pred ------------------ceEEEchhhhhCCHHHHHHHH----h--hCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCc
Confidence 014455554433332333222 2 3469999999999999999988899999999999
Q ss_pred cChHHhhhcCcccccc-CccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 001888 679 NDVGMLQEADIGVGIS-GVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYA 755 (1000)
Q Consensus 679 ND~~mlk~AdvGIa~~-g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~ 755 (1000)
||++||++||+||||+ |.+ .|+++||+++.+ |..+.++ +.|||++|.|+++++.|.+++|+..+++.+++.++.
T Consensus 707 ND~~alk~Advgiamg~g~~--~ak~aAd~vl~~~~~~~i~~~-i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g 783 (995)
T 3ar4_A 707 NDAPALKKAEIGIAMGSGTA--VAKTASEMVLADDNFSTIVAA-VEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALG 783 (995)
T ss_dssp GGHHHHHHSTEEEEETTSCH--HHHHTCSEEETTCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHCCeEEEeCCCCH--HHHHhCCEEECCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999995 333 389999999976 7778888 899999999999999999999999998888887763
Q ss_pred hcCCccchhhHHHHHHHHHHHHHHHHHHHhcccCCChhhhhcCccchhccccCCccchhhHHHhhHHHHHHHHHHHHHHH
Q 001888 756 SFSGRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTT 835 (1000)
Q Consensus 756 ~fs~~~~~~~~~ll~~n~~~~~~p~~~~~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 835 (1000)
...++.++|++|+|++++.+|++++++++. +++.+.++|+ .++..+++++.++.|++.|+++++++++.++
T Consensus 784 ---~~~pl~~~qil~~nl~~d~~p~l~l~~~~~--~~~~m~~~P~----~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ 854 (995)
T 3ar4_A 784 ---LPEALIPVQLLWVNLVTDGLPATALGFNPP--DLDIMDRPPR----SPKEPLISGWLFFRYMAIGGYVGAATVGAAA 854 (995)
T ss_dssp ---CCCSSCHHHHHHHHHTTTHHHHHHHTTCCC--CTTGGGSCCC----CTTCCSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CcchHHHHHHHHHHHHHHHHHHHhhccCCC--ChhHHhCCCC----CCcccccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 224688999999999999999999998764 3456666665 4567899999999999999999988766543
Q ss_pred hhhc-cc-c--ccC-----------CCcc-----cc---hhhhhHHHHHHHHHHHHHHHHHHhhc-------chhHHHHH
Q 001888 836 NSIF-NQ-A--FRK-----------DGHA-----VD---YEVLGVAMYSSVVWAVNCQMALSINY-------FTWIQHFF 885 (1000)
Q Consensus 836 ~~~~-~~-~--~~~-----------~g~~-----~~---~~~~~~~~~~~~v~~~~~~~~~~~~~-------~~~~~~~~ 885 (1000)
+.+. .. . ... ++.. .+ .....|++|+++++++.++.+. .++ ...+.+.+
T Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~-~r~~~~~~~~~~~~~n~~ 933 (995)
T 3ar4_A 855 WWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALN-SLSENQSLMRMPPWVNIW 933 (995)
T ss_dssp HHTSSCSSSCCCTTCCGGGCSSCSSCCSCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHT-TSCSSCCTTTSCGGGCHH
T ss_pred HHHHhcccccccccchhccccccccccccccccccccccchhhhhHHHHHHHHHHHHHHHH-hhccccchhccCCccCHH
Confidence 3221 10 0 000 0000 01 1235788899988887777643 211 12345666
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 001888 886 IWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRF 950 (1000)
Q Consensus 886 ~~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~~~~~~ll~~~i~k~~~~~~ 950 (1000)
+++++++.++++++..++|. ++ .+|+..++++..|+.+++++++.++++++.|++.|.|
T Consensus 934 l~~~~~~~~~l~~~~~~~p~-~~-----~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~ 992 (995)
T 3ar4_A 934 LLGSICLSMSLHFLILYVDP-LP-----MIFKLKALDLTQWLMVLKISLPVIGLDEILKFIARNY 992 (995)
T ss_dssp HHHHHHHHHHHHHHHHHSTH-HH-----HHTTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHH-HH-----HhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 77777777776666667762 22 2566778899999999999999999999999998866
No 3
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=100.00 E-value=4e-85 Score=827.20 Aligned_cols=724 Identities=19% Similarity=0.210 Sum_probs=544.5
Q ss_pred cCCCCCeEEeceeecCCCeEEEEEEEecchhhH---hhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 001888 58 PLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKV---MQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGSVFFGIET 134 (1000)
Q Consensus 58 ~l~~~n~l~~Gs~l~~tg~~~g~Vv~tG~~Tki---~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~ 134 (1000)
|++.+|++|+||.+.+ |+++|+|++||++|++ +++...++.+++|+++.+++++.+++++.+++|++.+++.. |.
T Consensus 241 ~~~~~n~v~~GT~v~~-G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~-~~ 318 (1028)
T 2zxe_A 241 PLETRNIAFFSTNCVE-GTARGVVVYTGDRTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSL-IL 318 (1028)
T ss_dssp TTTCSSEECTTCEEEE-EEEEEEEEECGGGSHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HT
T ss_pred cccccceEEeCceEEc-ceEEEEEEEeccccHHHHHHHhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hc
Confidence 5677899999999997 9999999999999954 55666778889999999999999999998888887766533 22
Q ss_pred ccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHHhHHHhhcccccccccCCCc
Q 001888 135 KRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMYYEDTDKP 214 (1000)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~~~~~~~~ 214 (1000)
+. .| ...+..++.+++.+|||+||++++++.++++. +| ++++
T Consensus 319 ~~--------~~--------------------~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~------~m----ak~~ 360 (1028)
T 2zxe_A 319 GY--------SW--------------------LEAVIFLIGIIVANVPEGLLATVTVCLTLTAK------RM----ARKN 360 (1028)
T ss_dssp TC--------CH--------------------HHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHH------HH----HTTT
T ss_pred cC--------cH--------------------HHHHHHHHHHHHHHcCchHHHHHHHHHHHHHH------HH----hhCC
Confidence 11 23 22566677888899999999999999999988 66 7899
Q ss_pred ceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcccccCCCCCCCCCCCCccc
Q 001888 215 ARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIV 294 (1000)
Q Consensus 215 ~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (1000)
++||+++++|+||++++||||||||||+|+|+|+++++++..|.....+
T Consensus 361 ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~------------------------------- 409 (1028)
T 2zxe_A 361 CLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTE------------------------------- 409 (1028)
T ss_dssp EEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCT-------------------------------
T ss_pred ceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCC-------------------------------
Confidence 9999999999999999999999999999999999999988766422100
Q ss_pred cCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCc--eEEeeCChhHHHHHHHHHHcCcEEE
Q 001888 295 ESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGE--ISYEAESPDEAAFVIAAREVGFQFF 372 (1000)
Q Consensus 295 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~--~~~~~~sp~e~al~~~a~~~g~~~~ 372 (1000)
. ..+.. .+..++..+.++.++++||++..+...+... ..+..+||+|.||+++|++.|....
T Consensus 410 -~---~~~~~------------~~~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~ 473 (1028)
T 2zxe_A 410 -N---QSGAA------------FDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQ 473 (1028)
T ss_dssp -T---CCSCC------------CCSSCHHHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHH
T ss_pred -C---ccccc------------cccCCHHHHHHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHH
Confidence 0 00000 0112345668899999999998764322111 1123589999999999987642110
Q ss_pred eecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcC---CCcEEEEEccchhHhHHHHhcc---------
Q 001888 373 GSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNP---ENQLLLLCKGADSVMFERLSKH--------- 440 (1000)
Q Consensus 373 ~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~~--------- 440 (1000)
..+..|+++.++||+|+||||+++++.+ ++++++|+||||+.|+++|+..
T Consensus 474 ------------------~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l 535 (1028)
T 2zxe_A 474 ------------------GMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPL 535 (1028)
T ss_dssp ------------------HHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBC
T ss_pred ------------------HHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhhcCCCcccC
Confidence 0145688999999999999999999974 5788999999999999999752
Q ss_pred ChhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeecccc
Q 001888 441 GQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKL 520 (1000)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~l 520 (1000)
+++.++++.+++++++++|+|||++|||.++++++.++. .. +++ ..+.+|+|++|+|+++++||+
T Consensus 536 ~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~--------~~--~~~-----~~~~~e~~l~~lG~i~i~Dpl 600 (1028)
T 2zxe_A 536 KEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGY--------PF--DAD-----EPNFPTTDLCFVGLMAMIDPP 600 (1028)
T ss_dssp CHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTC--------CC--CTT-----TTCSCCSSEEEEEEEEEECCB
T ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEEEEecCcccccccc--------cc--chh-----hhhhhhcCeEEEeeeccCCCC
Confidence 234567888999999999999999999999765322110 00 000 012357899999999999999
Q ss_pred cCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHH
Q 001888 521 QKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIR 600 (1000)
Q Consensus 521 r~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (1000)
|++++++|++|+++||++||+|||+..||.++|++||+...+...+ .. . .....
T Consensus 601 r~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i---------~~---------~--------~~~~~ 654 (1028)
T 2zxe_A 601 RAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETI---------ED---------I--------AARLN 654 (1028)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCH---------HH---------H--------HHHTT
T ss_pred ChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhH---------HH---------H--------HhhcC
Confidence 9999999999999999999999999999999999999975433210 00 0 00000
Q ss_pred hhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCccC
Q 001888 601 EGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGAND 680 (1000)
Q Consensus 601 ~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ND 680 (1000)
...... ........+++|.++..+.++++ .++...++.++|||++|+||..+|+.+++.|++|+|+|||.||
T Consensus 655 ~~~~~~----~~~~~~~~vi~G~~l~~~~~~~l----~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND 726 (1028)
T 2zxe_A 655 IPIGQV----NPRDAKACVVHGSDLKDLSTEVL----DDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVND 726 (1028)
T ss_dssp CCGGGS----CGGGCCEEEEEHHHHTTCCHHHH----HHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGG
T ss_pred cchhhc----cccccceEEEEcHHhhhCCHHHH----HHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcch
Confidence 000000 11122356889988776544333 3444556668999999999999999998889999999999999
Q ss_pred hHHhhhcCccccccCccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 001888 681 VGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFS 758 (1000)
Q Consensus 681 ~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~fs 758 (1000)
++||++|||||||+.+....++++||+++.+ |+.+.++ +.|||++|.|+++++.|.+++|+..+++.+++.++.
T Consensus 727 ~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~~~~~~I~~~-i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~--- 802 (1028)
T 2zxe_A 727 SPALKKADIGVAMGISGSDVSKQAADMILLDDNFASIVTG-VEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGN--- 802 (1028)
T ss_dssp HHHHHHSSEEEEESSSCCHHHHHHCSEEETTCCTHHHHHH-HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHC---
T ss_pred HHHHHhCCceEEeCCccCHHHHHhcCEEecCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---
Confidence 9999999999999622223389999999987 7779888 899999999999999999999999998888887764
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHHHhcccCCChhhhhcCccchhccccCCccchhhHHH-hhHHHHHHHHHHHHHHHhh
Q 001888 759 GRPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILG-WMSNGVLSAIIIFFFTTNS 837 (1000)
Q Consensus 759 ~~~~~~~~~ll~~n~~~~~~p~~~~~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 837 (1000)
...+++++|++|+|++++.+|+++++..+ +.++.+.++|+ ..+.+++++++.++. |+..|++++++.|+.+++.
T Consensus 803 ~~~~l~~~qil~inl~~d~~pa~al~~e~--~~~~~m~~~Pr---~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 877 (1028)
T 2zxe_A 803 VPLPLGTVTILCIDLGTDMVPAISLAYEQ--AESDIMKRQPR---NPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVI 877 (1028)
T ss_dssp CCCSSCHHHHHHHHTTTTHHHHHHGGGCC--CSSCGGGSCCC---CTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHhccCc--cchhhhccCCC---CcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22458999999999999999999998653 34455555564 122348999998877 6688999999888766553
Q ss_pred hccccc-------------cC--------CCccc-------chhhhhHHHHHHHHHHHHHHHHHH-hhcchh----HHHH
Q 001888 838 IFNQAF-------------RK--------DGHAV-------DYEVLGVAMYSSVVWAVNCQMALS-INYFTW----IQHF 884 (1000)
Q Consensus 838 ~~~~~~-------------~~--------~g~~~-------~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~----~~~~ 884 (1000)
+....+ .. .|... ......|++|+++++.+.+..+.. ++..++ +.|.
T Consensus 878 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~n~ 957 (1028)
T 2zxe_A 878 LAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFTCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNK 957 (1028)
T ss_dssp HHHTTCCHHHHTTCHHHHSCTTCCCEECTTSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSSCHHHHCSCCH
T ss_pred HhccCcccchhhcccchhccccccccccccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHccCCcchhccCCcCH
Confidence 321110 00 01100 012467899999998887776532 222222 3466
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 001888 885 FIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRF 950 (1000)
Q Consensus 885 ~~~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~i~~~~~~ll~~~i~k~~~~~~ 950 (1000)
++++++++.++++++..++|. ++. +|+..++++..|+.++.++++.++.+++.|++.|++
T Consensus 958 ~l~~~~~~~~~l~~~~~~~p~-~~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~ 1017 (1028)
T 2zxe_A 958 ILIFGLFEETALAAFLSYCPG-TDV-----ALRMYPLKPSWWFCAFPYSLIIFLYDEMRRFIIRRS 1017 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHSTT-HHH-----HTCCCCCCGGGGGTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHhhh-HHh-----hhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 777788888888888888873 222 556788999999999999999999999999988765
No 4
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=100.00 E-value=1.9e-77 Score=736.69 Aligned_cols=636 Identities=16% Similarity=0.168 Sum_probs=470.8
Q ss_pred CCccccCCC--CCeEEeceeecCCCeEEEEEEEecchhhHhh---cCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001888 53 EGKQYPLSP--QQILLRDSKLKNTDYVYGVVVFTGHDTKVMQ---NATDPPSKRSKIERKMDKIVYLLFSTLILISSTGS 127 (1000)
Q Consensus 53 ~~~~~~l~~--~n~l~~Gs~l~~tg~~~g~Vv~tG~~Tki~~---n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~ 127 (1000)
+||+.|+.+ +|.+|+||.+.+ |++.++|++||.+|++.+ ....++.+++++++.++++..++++++++++++.+
T Consensus 231 TGES~PV~K~~gd~v~sGT~v~~-G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~ 309 (920)
T 1mhs_A 231 TGESLAVDKHKGDQVFASSAVKR-GEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVW 309 (920)
T ss_dssp SSCCCCEECCSSCEECSCBCCSC-CCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcceEecCCCeeecCceEec-ceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 489988855 699999999995 999999999999997654 34556678899999999999988887777766554
Q ss_pred HhhhhhcccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHHhHHHhhcccccc
Q 001888 128 VFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMY 207 (1000)
Q Consensus 128 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~ 207 (1000)
+.+.+ . . .. +...+..++++++.+|||+||++++++.++++. +|
T Consensus 310 ~~~~~-~--~------~~--------------------~~~~l~~av~llV~aiP~aLp~~vti~la~g~~------~m- 353 (920)
T 1mhs_A 310 VSSFY-R--S------NP--------------------IVQILEFTLAITIIGVPVGLPAVVTTTMAVGAA------YL- 353 (920)
T ss_dssp HTTTT-T--T------CC--------------------HHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHH------HH-
T ss_pred HHHHh-c--C------Cc--------------------HHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHH------HH-
Confidence 43211 0 0 01 133677889999999999999999999999888 56
Q ss_pred cccCCCcceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcccccCCCCCCCC
Q 001888 208 YEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAP 287 (1000)
Q Consensus 208 ~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1000)
+++++++|+++++|+||++++||||||||||+|+|+|.+++..+. +.
T Consensus 354 ---ak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g-~~----------------------------- 400 (920)
T 1mhs_A 354 ---AKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAG-VD----------------------------- 400 (920)
T ss_dssp ---HHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSC-CC-----------------------------
T ss_pred ---HhCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEEeecCC-CC-----------------------------
Confidence 778999999999999999999999999999999999987643210 00
Q ss_pred CCCCccccCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeCChhHHHHHHHHHHc
Q 001888 288 GLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREV 367 (1000)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~ 367 (1000)
+ .+++.+.++|+.... .++||+|.|+++++++.
T Consensus 401 -------------------------------~-----~~ll~~a~l~~~~~~-----------~~~~P~e~Al~~~~~~~ 433 (920)
T 1mhs_A 401 -------------------------------P-----EDLMLTACLAASRKK-----------KGIDAIDKAFLKSLKYY 433 (920)
T ss_dssp -------------------------------C-----THHHHHHHHSCCCSS-----------CSCCSHHHHHHHHHHHS
T ss_pred -------------------------------H-----HHHHHHHHHhcCCcc-----------cCCChHHHHHHHHHHhc
Confidence 0 134566778875411 12499999999999876
Q ss_pred CcEEEeecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCCcEEEEEccchhHhHHHHhcc---Chhh
Q 001888 368 GFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKH---GQQF 444 (1000)
Q Consensus 368 g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---~~~~ 444 (1000)
+... .....|++++.+||+|.||||+++++.++|+.++|+||||+.++++|... +++.
T Consensus 434 ~~~~-------------------~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~~~~~~~~~ 494 (920)
T 1mhs_A 434 PRAK-------------------SVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEEDHPIPEEV 494 (920)
T ss_dssp SSCC-------------------GGGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCCSSCCCHHH
T ss_pred ccch-------------------hhccccceeEEeeccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHHhccccCCCCHHH
Confidence 5310 01456888999999999999999998777888899999999999999752 3345
Q ss_pred HHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeecccccCCc
Q 001888 445 EAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGV 524 (1000)
Q Consensus 445 ~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~lr~~v 524 (1000)
++++.+.+++++.+|+||+++|+|.. |++++|+|+++++||+|+++
T Consensus 495 ~~~~~~~~~~~a~~G~RvL~vA~~~~----------------------------------e~~l~~lGli~i~Dp~R~ea 540 (920)
T 1mhs_A 495 DQAYKNKVAEFATRGFRSLGVARKRG----------------------------------EGSWEILGIMPCMDPPRHDT 540 (920)
T ss_dssp HHHHHHHHHHHHTSSCCCCEECCCSS----------------------------------SCSCCCCBBCCCCCCCCHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEEEEecc----------------------------------ccccEEEEEEEEeccccccH
Confidence 67788899999999999999998731 36899999999999999999
Q ss_pred HHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCc--eEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhh
Q 001888 525 PECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEM--KQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREG 602 (1000)
Q Consensus 525 ~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (1000)
+++|+.|+++||++||+|||+..||.+||+++|+..... ....+++..
T Consensus 541 ~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~~------------------------------ 590 (920)
T 1mhs_A 541 YKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGG------------------------------ 590 (920)
T ss_dssp HHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBCC------------------------------
T ss_pred HHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCcc------------------------------
Confidence 999999999999999999999999999999999964210 000000000
Q ss_pred hhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCccChH
Q 001888 603 ISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVG 682 (1000)
Q Consensus 603 ~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ND~~ 682 (1000)
.++++++... .. +..+++|++|+||.++|+.+|+.|+.|+|+|||.||+|
T Consensus 591 ----------------~~~~~el~~~------------~~--~~~V~arv~P~~K~~iV~~Lq~~g~~Vam~GDGvNDap 640 (920)
T 1mhs_A 591 ----------------DMPGSEVYDF------------VE--AADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAP 640 (920)
T ss_dssp ----------------CGGGGGGGTT------------TT--TTSCEESCCSTHHHHHHHHHHTTTCCCEECCCCGGGHH
T ss_pred ----------------cCCHHHHHHH------------Hh--hCeEEEEeCHHHHHHHHHHHHhCCCeEEEEcCCcccHH
Confidence 0111111111 11 23489999999999999999888999999999999999
Q ss_pred HhhhcCccccccCccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Q 001888 683 MLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGR 760 (1000)
Q Consensus 683 mlk~AdvGIa~~g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~fs~~ 760 (1000)
||++|||||||++.. ..|+++||+++.+ |..+.++ +.+||++|+|+++++.|.++.|+.+.....++..+. +.
T Consensus 641 aLk~AdvGIAmg~gt-d~ak~aADiVl~~~~~~~I~~a-i~~gR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~---~~ 715 (920)
T 1mhs_A 641 SLKKADTGIAVEGSS-DAARSAADIVFLAPGLGAIIDA-LKTSRQIFHRMYAYVVYRIALSIHLEIFLGLWIAIL---NR 715 (920)
T ss_dssp HHHHSSEEEEETTSC-HHHHHSSSEEESSCCSHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---SC
T ss_pred HHHhCCcCccccccc-HHHHHhcCeEEcCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hc
Confidence 999999999996432 3388999999986 7778888 899999999999999999999998754444433333 33
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhcccCCChhhhhcCccchhccccCCccchhhHHHhhHHHHHHHHHHHHHHHhhhcc
Q 001888 761 PAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFN 840 (1000)
Q Consensus 761 ~~~~~~~ll~~n~~~~~~p~~~~~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 840 (1000)
+ +++.+++|.|++.+. |++++++++.+++ +.|+- ++. .+.+...++.|++.++..++.+++.+..
T Consensus 716 ~-l~~~~il~~~l~~d~-~~lal~~e~~~~~-----~~P~~----~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 780 (920)
T 1mhs_A 716 S-LNIELVVFIAIFADV-ATLAIAYDNAPYS-----QTPVK----WNL----PKLWGMSVLLGVVLAVGTWITVTTMYAQ 780 (920)
T ss_dssp C-CCHHHHHHHHHHHTT-HHHHCCCCCSGGG-----GSCCC----CCS----SSCSSCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred c-CCHHHHHHHHHHHHH-HhhhhcccCcccc-----cCCCC----chH----HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3 677888888888886 9999987653221 33431 111 2233334556777766655544333221
Q ss_pred ccccCCCcccchhhhhHHHHHHHHHHHHHHHHHH-hh--cchhHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhHHHHHH
Q 001888 841 QAFRKDGHAVDYEVLGVAMYSSVVWAVNCQMALS-IN--YFTWIQHFFIWGSIALWYIFLVVYGSLPPTFSTTAYKVLVE 917 (1000)
Q Consensus 841 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~--~~~~~~~~~~~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (1000)
. ...+....+....|++|+++++.+.+..+.. +. .|..+.+..+++++++..++..++.++| .|.
T Consensus 781 ~--~~~~~~~~~~~~~T~~f~~lv~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~f~--------- 848 (920)
T 1mhs_A 781 G--ENGGIVQNFGNMDEVLFLQISLTENWLIFITRANGPFWSSIPSWQLSGAIFLVDILATCFTIWG-WFE--------- 848 (920)
T ss_dssp T--TTCCSSSSSSSHHHHHHHHHHHHHHHHTTSSSCSSSCSCCSCTHHHHHHHHHHHHHHHHHHSSS-STT---------
T ss_pred c--ccccccchhhHHHHHHHHHHHHHHHHHHHHhccchhhhcCchHHHHHHHHHHHHHHHHHHHHhh-hhc---------
Confidence 0 0111111222478999999999887776532 11 1222345556666666666666666665 222
Q ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 001888 918 ACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRF 950 (1000)
Q Consensus 918 ~~~~~~~~w~~~i~~~~~~ll~~~i~k~~~~~~ 950 (1000)
+.++++..|+.+++++++.++..++.|++.++.
T Consensus 849 ~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~ 881 (920)
T 1mhs_A 849 HSDTSIVAVVRIWIFSFGIFCIMGGVYYILQDS 881 (920)
T ss_dssp SCSHHHHTHHHHHHHTTHHHHHHHHHHHCCCCC
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 456788899999999999999999998766554
No 5
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=100.00 E-value=1.1e-74 Score=713.37 Aligned_cols=647 Identities=17% Similarity=0.173 Sum_probs=445.7
Q ss_pred ECCccccCCC--CCeEEeceeecCCCeEEEEEEEecchhhHhhc---CCCCCCCccHHHHHHHHHHHHHHH-HHHHHHHH
Q 001888 52 YEGKQYPLSP--QQILLRDSKLKNTDYVYGVVVFTGHDTKVMQN---ATDPPSKRSKIERKMDKIVYLLFS-TLILISST 125 (1000)
Q Consensus 52 ~~~~~~~l~~--~n~l~~Gs~l~~tg~~~g~Vv~tG~~Tki~~n---~~~~~~k~s~l~~~~n~~~~~~~~-i~~~~~~i 125 (1000)
++||+.|+.+ +|.+|+||.+.+ |++.++|++||.+|++.+. ... ..+++++++.++++..+++. +.++++++
T Consensus 181 LTGES~Pv~K~~g~~v~~GT~v~~-G~~~~~V~~tG~~T~~g~i~~lv~~-~~~~~~lq~~~~~i~~~~~~~~~~~~~~~ 258 (885)
T 3b8c_A 181 LTGESLPVTKHPGQEVFSGSTCKQ-GEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTAIGNFCICSIAIGMVIE 258 (885)
T ss_dssp TTCCSSCCCBSSCCCCCSCCCCCS-CCCCCBCCSCTTTTTSTTCCCSCCS-CSCCSTTTTTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcceEecCCCccccCeEEee-eEEEEEEEEcCcccHHHHHHHHHhc-ccccChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3589999865 599999999997 9999999999999976543 223 46789999999999877443 22223332
Q ss_pred HHHhhhhhcccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHHhHHHhhcccc
Q 001888 126 GSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRD 205 (1000)
Q Consensus 126 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~~~~i~~d~~ 205 (1000)
.++++.+ .+ ..|. ..+.+++.+++.+|||+||++++++..+++. +
T Consensus 259 ~~~~~~~-~~--------~~~~--------------------~~~~~~v~llv~aiP~aLp~~vti~la~g~~------r 303 (885)
T 3b8c_A 259 IIVMYPI-QR--------RKYR--------------------DGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH------R 303 (885)
T ss_dssp STTTTTT-TC--------SCST--------------------THHHHHHHHTTTTCCSSTTTHHHHTTTHHHH------H
T ss_pred HHHHHHH-cc--------CcHH--------------------HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH------H
Confidence 2222111 11 0121 1577899999999999999999999888877 6
Q ss_pred cccccCCCcceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcccccCCCCCC
Q 001888 206 MYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTD 285 (1000)
Q Consensus 206 m~~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (1000)
| +++++++|+++++|+||++++||||||||||+|+|+|.++.+. .++..
T Consensus 304 ~----ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~--~~~~~------------------------- 352 (885)
T 3b8c_A 304 L----SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE--VFCKG------------------------- 352 (885)
T ss_dssp H----TTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC--SSCSS-------------------------
T ss_pred H----HhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEe--ccCCC-------------------------
Confidence 6 8899999999999999999999999999999999999643210 01000
Q ss_pred CCCCCCccccCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeCChhHHHHHHHHH
Q 001888 286 APGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAR 365 (1000)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~ 365 (1000)
....+++...++|+... ++||.|.|+++++.
T Consensus 353 ------------------------------------~~~~~ll~~aa~~~~~~-------------~~~p~~~Al~~~~~ 383 (885)
T 3b8c_A 353 ------------------------------------VEKDQVLLFAAMASRVE-------------NQDAIDAAMVGMLA 383 (885)
T ss_dssp ------------------------------------TTHHHHHHHHHHHCCSS-------------SCCSHHHHHHHTTC
T ss_pred ------------------------------------CCHHHHHHHHHHHhCCC-------------CCCchHHHHHHHhh
Confidence 00124667778887531 37999999998764
Q ss_pred HcCcEEEeecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCCcEEEEEccchhHhHHHHhccChhhH
Q 001888 366 EVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFE 445 (1000)
Q Consensus 366 ~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~ 445 (1000)
+.. . ....|++++.+||+|.||||+++++..+|+.++++||||+.++++|+... +.+
T Consensus 384 ~~~----------------~------~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~-~~~ 440 (885)
T 3b8c_A 384 DPK----------------E------ARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKASN-DLS 440 (885)
T ss_dssp CTT----------------C------CCCSSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCCS-TTT
T ss_pred chh----------------h------HhhcCceeecccCCcccceEEEEEEecCCcEEEEEeCCHHHHHHhccCch-hhH
Confidence 210 0 03456788899999999999999987678888999999999999986432 345
Q ss_pred HHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeecccccCCcH
Q 001888 446 AETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVP 525 (1000)
Q Consensus 446 ~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~lr~~v~ 525 (1000)
+++.+.+++++.+|+||+++|+|.+++++ .+..|++++|+|+++++||+|++++
T Consensus 441 ~~~~~~~~~~a~~G~rvl~vA~~~~~~~~--------------------------~~~~e~~l~~lGli~i~Dp~R~~a~ 494 (885)
T 3b8c_A 441 KKVLSIIDKYAERGLRSLAVARQVVPEKT--------------------------KESPGAPWEFVGLLPLFDPPRHDSA 494 (885)
T ss_dssp TTHHHHHHHHTTTTCEEEEECCBCCCSSS--------------------------SSCCCCCCCCCEEEEECCCCCHHHH
T ss_pred HHHHHHHHHHHhCCCeEEEEEEecccccc--------------------------ccccccCcEEEEEEEeecccchhHH
Confidence 56778889999999999999999886532 1345789999999999999999999
Q ss_pred HHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhhhhh
Q 001888 526 ECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQ 605 (1000)
Q Consensus 526 e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 (1000)
++|+.|+++||+++|+|||+..||.++|+++|+..+.. +..
T Consensus 495 ~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~-----~~~---------------------------------- 535 (885)
T 3b8c_A 495 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-----PSS---------------------------------- 535 (885)
T ss_dssp HHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCS-----TTS----------------------------------
T ss_pred HHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccC-----Ccc----------------------------------
Confidence 99999999999999999999999999999999964210 000
Q ss_pred hcccccCccceEEEEeccchHHHh-hHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCccChHHh
Q 001888 606 VNSAKESKVTFGLVIDGKSLDFAL-DKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGML 684 (1000)
Q Consensus 606 ~~~~~~~~~~~~lvi~g~~l~~~~-~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ND~~ml 684 (1000)
++.|.+++..+ +.++.+ +.. +..+++|++|+||.++|+.+|+.|+.|+|+|||.||+|||
T Consensus 536 -------------~l~g~~~~~~~~~~~l~~----~~~--~~~v~arv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaL 596 (885)
T 3b8c_A 536 -------------ALLGTHKDANLASIPVEE----LIE--KADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPAL 596 (885)
T ss_dssp -------------SCCBGGGGTTSCCSCHHH----HHH--TSCCEECCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHH
T ss_pred -------------eeeccccccccchhHHHH----HHh--hCcEEEEECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHH
Confidence 00111111000 001111 111 2348999999999999999988899999999999999999
Q ss_pred hhcCccccccCccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCccc
Q 001888 685 QEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFTLFWYEAYASFSGRPA 762 (1000)
Q Consensus 685 k~AdvGIa~~g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~fs~~~~ 762 (1000)
++|||||||++. ...|+++||+++.+ |..+..+ +.+||.+|+|+++++.|.+..|+..++..++..+ ++. .+
T Consensus 597 k~AdvGIAmg~g-td~ak~aADivl~~~~~~~I~~a-i~~gR~~~~ni~~~i~~~l~~n~~~~~~~~~~~~--~~~--~~ 670 (885)
T 3b8c_A 597 KKADIGIAVADA-TDAARGASDIVLTEPGLSVIISA-VLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIAL--IWE--FD 670 (885)
T ss_dssp HHSSSCCCCSSS-HHHHGGGCSSCCSSCSHHHHTHH-HHTHHHHHHHHHHHHHHHHHHTTTTTSTTHHHHS--SCS--SC
T ss_pred HhCCEeEEeCCc-cHHHHHhcceeeccCchhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--ccC--cC
Confidence 999999999643 23388999999987 6668888 8999999999999999999999875554444433 222 35
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcccCCChhhhhcCccchhccccCCccchhhHHHhhHHHHHHHHHHHHHHHhhhcccc
Q 001888 763 YNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVLSAIIIFFFTTNSIFNQA 842 (1000)
Q Consensus 763 ~~~~~ll~~n~~~~~~p~~~~~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (1000)
+++++++|+|++.+..+ +.++....+ .|+ .++...+ .+.+..+++.|++.+++.++++++.+....
T Consensus 671 l~p~~il~i~l~~d~~~-l~l~~~~~~--------~~~----~p~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 736 (885)
T 3b8c_A 671 FSAFMVLIIAILNDGTI-MTISKDRVK--------PSP----TPDSWKL-KEIFATGVVLGGYQAIMTVIFFWAAHKTDF 736 (885)
T ss_dssp SCHHHHHHHHHHHHTTT-CCCCCCCCC--------CSS----CCCSTTT-TTTTTTHHHHHSSTHHHHTTSSSCTTTTTT
T ss_pred cCHHHHHHHHHHHHHHH-HhhcccccC--------ccc----CCcchhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 78999999999998875 555442211 121 1222222 444555667788888777665444332111
Q ss_pred ccC-CCcc---cchhhhhHHHHHHHHHHHHHHHHHHhhc--chhHHHH---HHHHHHHHHHHHHHHHhcCCCCCchhhHH
Q 001888 843 FRK-DGHA---VDYEVLGVAMYSSVVWAVNCQMALSINY--FTWIQHF---FIWGSIALWYIFLVVYGSLPPTFSTTAYK 913 (1000)
Q Consensus 843 ~~~-~g~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~~~~~~~---~~~~si~~~~~~~~~~~~~~~~~~~~~~~ 913 (1000)
+.. .|.. .....+.+.+|...++...+. .+..|+ ++++.+. .++..++..++.+++..+.+..
T Consensus 737 ~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~-~~~~Rs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 808 (885)
T 3b8c_A 737 FSDTFGVRSIRDNNHELMGAVYLQVSIISQAL-IFVTRSRSWSFVERPGALLMIAFLIAQLIATLIAVYANWE------- 808 (885)
T ss_dssp TTCCCCSSCCGGGTHHHHTTTTTTTSSTTGGG-TTCSSSCTTTSTTSTTTTTSGGGSSTTTTTTSSSSSCCCC-------
T ss_pred cccccCcccccchHHHHHHHHHHHHHHHHHHH-HHHhccCCCCcccCccHHHHHHHHHHHHHHHHHHHhcccc-------
Confidence 100 0100 001123333333222222232 233333 3222222 2222222222222222221111
Q ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 001888 914 VLVEACAPSILYWLTTLLVVVSTLLPYFLYRAFQTRFR 951 (1000)
Q Consensus 914 ~~~~~~~~~~~~w~~~i~~~~~~ll~~~i~k~~~~~~~ 951 (1000)
++...++++..|+++++.+++.+++.++.|++.|+..
T Consensus 809 -~~~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~~ 845 (885)
T 3b8c_A 809 -FAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIRYIL 845 (885)
T ss_dssp -SSCCCCCTTTTHHHHHHHTGGGTHHHHHHHHHHTTC-
T ss_pred -ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 1124567888899888888888999999998876543
No 6
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=100.00 E-value=1.4e-52 Score=507.45 Aligned_cols=411 Identities=19% Similarity=0.252 Sum_probs=336.5
Q ss_pred CCccccC--CCCCeEEeceeecCCCeEEEEEEEecchh---hHhhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001888 53 EGKQYPL--SPQQILLRDSKLKNTDYVYGVVVFTGHDT---KVMQNATDPPSKRSKIERKMDKIVYLLFSTLILISSTGS 127 (1000)
Q Consensus 53 ~~~~~~l--~~~n~l~~Gs~l~~tg~~~g~Vv~tG~~T---ki~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~ 127 (1000)
+||+.|+ ..++.+++||.+.+ |++.+.|++||.+| |+.++...++.+++|+|+.++++..++++++++++++++
T Consensus 277 TGES~Pv~K~~gd~v~~Gt~~~~-G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~ 355 (736)
T 3rfu_A 277 TGEPIPVAKEASAKVIGATINQT-GSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSF 355 (736)
T ss_dssp TTCSSCEEECTTCEECTTCEEES-CCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccccEEeccCCcCCCceEecc-ceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5888888 45699999999995 99999999999999 556666667778899999999999999999999999988
Q ss_pred HhhhhhcccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHHhHHHhhcccccc
Q 001888 128 VFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQSVFINHDRDMY 207 (1000)
Q Consensus 128 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~~~~i~~d~~m~ 207 (1000)
++|.++.... .| ...+.+++.+++.+|||+|+++++++...+.. ++
T Consensus 356 ~~w~~~~~~~-------~~--------------------~~~l~~ai~vlviacPcaL~la~p~a~~~~~~------~~- 401 (736)
T 3rfu_A 356 IVWALLGPQP-------AL--------------------SYGLIAAVSVLIIACPCALGLATPMSIMVGVG------KG- 401 (736)
T ss_dssp HHHHHHCSSS-------ST--------------------THHHHHHHHHHHHHCCSTHHHHHHHHHHHHHH------HH-
T ss_pred HHHHHhCCCc-------hH--------------------HHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHH------HH-
Confidence 8776553211 12 22678899999999999999999999999887 45
Q ss_pred cccCCCcceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcccccCCCCCCCC
Q 001888 208 YEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAP 287 (1000)
Q Consensus 208 ~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1000)
+++|+++|+++++|+||++|+||||||||||+|+|.|.++..++.. .
T Consensus 402 ---a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~----~-------------------------- 448 (736)
T 3rfu_A 402 ---AQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIVTDDFV----E-------------------------- 448 (736)
T ss_dssp ---HHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEEESSSC----H--------------------------
T ss_pred ---hhcceeechHHHHHHhcCCCEEEEeCCCCCcCCceEEEEEEecCCC----H--------------------------
Confidence 7889999999999999999999999999999999999998733210 0
Q ss_pred CCCCccccCCCccCCcccCchhhhcccCCCCCChHHHHHHHH-HHhhhcceeeccCCCCCceEEeeCChhHHHHHHHHHH
Q 001888 288 GLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFR-VLAICHTAIPDVNEETGEISYEAESPDEAAFVIAARE 366 (1000)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~ 366 (1000)
.+++. +.+++ +.++||.+.|+++++++
T Consensus 449 -------------------------------------~~~l~~aa~le---------------~~s~hPla~Aiv~~a~~ 476 (736)
T 3rfu_A 449 -------------------------------------DNALALAAALE---------------HQSEHPLANAIVHAAKE 476 (736)
T ss_dssp -------------------------------------HHHHHHHHHHH---------------HSSCCHHHHHHHHHHHT
T ss_pred -------------------------------------HHHHHHHHHHh---------------hcCCChHHHHHHHHHHh
Confidence 01111 22222 23579999999999988
Q ss_pred cCcEEEeecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCCcEEEEEccchhHhHHHHhccChhhHH
Q 001888 367 VGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEA 446 (1000)
Q Consensus 367 ~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~ 446 (1000)
.|+.+. ...+|++.+++. +.... +++ .+.+|+++.+.+.... ..
T Consensus 477 ~~~~~~---------------------------~~~~f~~~~g~g-v~~~~-~g~--~~~~G~~~~~~~~~~~-----~~ 520 (736)
T 3rfu_A 477 KGLSLG---------------------------SVEAFEAPTGKG-VVGQV-DGH--HVAIGNARLMQEHGGD-----NA 520 (736)
T ss_dssp TCCCCC---------------------------CCSCCCCCTTTE-EEECS-SSS--CEEEESHHHHHHHCCC-----CH
T ss_pred cCCCcc---------------------------CcccccccCCce-EEEEE-CCE--EEEEcCHHHHHHcCCC-----hh
Confidence 765431 234677666653 22222 333 2445999877553221 23
Q ss_pred HHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeecccccCCcHH
Q 001888 447 ETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPE 526 (1000)
Q Consensus 447 ~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~lr~~v~e 526 (1000)
...+..++++.+|+|++++|+ |.+++|+++++|++|+++++
T Consensus 521 ~~~~~~~~~~~~G~~vl~va~---------------------------------------d~~~~G~i~i~D~i~~~~~~ 561 (736)
T 3rfu_A 521 PLFEKADELRGKGASVMFMAV---------------------------------------DGKTVALLVVEDPIKSSTPE 561 (736)
T ss_dssp HHHHHHHHHHHTTCEEEEEEE---------------------------------------TTEEEEEEEEECCBCSSHHH
T ss_pred HHHHHHHHHHhcCCeEEEEEE---------------------------------------CCEEEEEEEeeccchhhHHH
Confidence 456678899999999999994 67899999999999999999
Q ss_pred HHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhhhhhh
Q 001888 527 CIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQV 606 (1000)
Q Consensus 527 ~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 606 (1000)
+|++|+++||+++|+|||+..+|..+|+++|+..
T Consensus 562 aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~---------------------------------------------- 595 (736)
T 3rfu_A 562 TILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKK---------------------------------------------- 595 (736)
T ss_dssp HHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCC----------------------------------------------
T ss_pred HHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCE----------------------------------------------
Confidence 9999999999999999999999999999999831
Q ss_pred cccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCccChHHhhh
Q 001888 607 NSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQE 686 (1000)
Q Consensus 607 ~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ND~~mlk~ 686 (1000)
++++++|++|.++|+.++..|+.|+|+|||.||++||+.
T Consensus 596 -----------------------------------------v~a~~~P~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~ 634 (736)
T 3rfu_A 596 -----------------------------------------VVAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAK 634 (736)
T ss_dssp -----------------------------------------EECSCCHHHHHHHHHHHHHHSCCEEEEECSSTTHHHHHH
T ss_pred -----------------------------------------EEEecCHHHHHHHHHHHHhcCCEEEEEECChHhHHHHHh
Confidence 888999999999999998889999999999999999999
Q ss_pred cCccccccCccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHH
Q 001888 687 ADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFT 747 (1000)
Q Consensus 687 AdvGIa~~g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~ 747 (1000)
||+||+|++.. ..++++||+++.+ ++.+.++ +.+||..++++++++.|.+.+|++.+.+
T Consensus 635 AdvGIAmg~g~-d~a~~~AD~vl~~~~~~~i~~a-i~~sr~t~~~i~qnl~~a~~yN~~~ipl 695 (736)
T 3rfu_A 635 ADIGIAMGTGT-DVAIESAGVTLLHGDLRGIAKA-RRLSESTMSNIRQNLFFAFIYNVLGVPL 695 (736)
T ss_dssp SSEEEEESSSC-SHHHHHCSEEECSCCSTTHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCcc-HHHHHhCCEEEccCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999996433 3389999999975 6678888 8999999999999999999999886544
No 7
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=100.00 E-value=1.5e-51 Score=502.83 Aligned_cols=413 Identities=19% Similarity=0.235 Sum_probs=332.9
Q ss_pred EEEEEE-----CCccccC--CCCCeEEeceeecCCCeEEEEEEEecchh---hHhhcCCCCCCCccHHHHHHHHHHHHHH
Q 001888 47 VGTLQY-----EGKQYPL--SPQQILLRDSKLKNTDYVYGVVVFTGHDT---KVMQNATDPPSKRSKIERKMDKIVYLLF 116 (1000)
Q Consensus 47 ~G~~~~-----~~~~~~l--~~~n~l~~Gs~l~~tg~~~g~Vv~tG~~T---ki~~n~~~~~~k~s~l~~~~n~~~~~~~ 116 (1000)
+|...+ +||+.|+ ..++.+++||.+.+ |++.+.|++||.+| |+.++...++.+++++++.+++++.+++
T Consensus 251 ~G~~~VdeS~LTGES~pv~K~~g~~v~~Gt~~~~-g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~ 329 (723)
T 3j09_A 251 EGESYVDESMISGEPVPVLKSKGDEVFGATINNT-GVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFI 329 (723)
T ss_dssp ECCEEEECHHHHCCSSCEEECTTCEECTTCEECS-SCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHH
T ss_pred ECCeEEecccccCCCcceeecCCCeeccceEEec-CcEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHH
Confidence 455555 4888887 55799999999995 99999999999999 6677778888899999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhcccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHHh
Q 001888 117 STLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQ 196 (1000)
Q Consensus 117 ~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~ 196 (1000)
+++++++++++++|.++.+. +|. ..+.+++.+++.+|||+|+++++++...+
T Consensus 330 ~~vl~~a~~~~~~~~~~~~~--------~~~--------------------~~~~~~i~vlvia~P~aL~la~p~a~~~~ 381 (723)
T 3j09_A 330 PTVLLVAISAFIYWYFIAHA--------PLL--------------------FAFTTLIAVLVVACPCAFGLATPTALTVG 381 (723)
T ss_dssp HHHHHHHHHHHTTSCSSTTC--------TTC--------------------CSHHHHHHHHHHHSCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCC--------cHH--------------------HHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 99999888887665443211 121 14778899999999999999999999988
Q ss_pred HHHhhcccccccccCCCcceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcc
Q 001888 197 SVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERT 276 (1000)
Q Consensus 197 ~~~i~~d~~m~~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~ 276 (1000)
.. +| +++|+++|+++.+|+||++++||||||||||+|+|+|.++...+..
T Consensus 382 ~~------~~----a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~~-------------------- 431 (723)
T 3j09_A 382 MG------KG----AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD-------------------- 431 (723)
T ss_dssp HH------HH----HTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESSSC--------------------
T ss_pred HH------HH----HHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeCCCC--------------------
Confidence 87 45 7889999999999999999999999999999999999999765310
Q ss_pred cccCCCCCCCCCCCCccccCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeCChh
Q 001888 277 FEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPD 356 (1000)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~ 356 (1000)
..+++...+.|.. .++||+
T Consensus 432 -----------------------------------------------~~~~l~~aa~~e~--------------~s~hP~ 450 (723)
T 3j09_A 432 -----------------------------------------------ERELLRLAAIAER--------------RSEHPI 450 (723)
T ss_dssp -----------------------------------------------HHHHHHHHHHHHT--------------TCCSHH
T ss_pred -----------------------------------------------HHHHHHHHHHHhc--------------cCCCch
Confidence 0123344444421 257999
Q ss_pred HHHHHHHHHHcCcEEEeecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCCcEEEEEccchhHhHHH
Q 001888 357 EAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFER 436 (1000)
Q Consensus 357 e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~ 436 (1000)
+.|+++++++.|+.+... ..++. .+ .+... . . .+.+|+++.+.+.
T Consensus 451 ~~Ai~~~a~~~~~~~~~~-------------------~~~~~---~~----g~g~~--~----~---~~~~g~~~~~~~~ 495 (723)
T 3j09_A 451 AEAIVKKALEHGIELGEP-------------------EKVEV---IA----GEGVV--A----D---GILVGNKRLMEDF 495 (723)
T ss_dssp HHHHHHHHHHTTCCCCSC-------------------CCCEE---ET----TTEEE--E----T---TEEEECHHHHHHT
T ss_pred hHHHHHHHHhcCCCcCCc-------------------cceEE---ec----CCceE--E----E---EEEECCHHHHHhc
Confidence 999999999988754221 11110 00 01110 0 1 2445887766442
Q ss_pred HhccChhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeee
Q 001888 437 LSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAV 516 (1000)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i 516 (1000)
.. ...+++.+.+++++.+|+|++++|+ |++++|++++
T Consensus 496 ~~----~~~~~~~~~~~~~~~~g~~~~~va~---------------------------------------~~~~~G~i~i 532 (723)
T 3j09_A 496 GV----AVSNEVELALEKLEREAKTAVIVAR---------------------------------------NGRVEGIIAV 532 (723)
T ss_dssp TC----CCCHHHHHHHHHHHTTTCEEEEEEE---------------------------------------TTEEEEEEEE
T ss_pred CC----CccHHHHHHHHHHHhcCCeEEEEEE---------------------------------------CCEEEEEEee
Confidence 21 2235677788899999999999993 7899999999
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHH
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVT 596 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (1000)
+|++|++++++|+.|+++||+++|+|||+..+|..+|+++|+.
T Consensus 533 ~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------------------- 575 (723)
T 3j09_A 533 SDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------------- 575 (723)
T ss_dssp ECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-------------------------------------
T ss_pred cCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCc-------------------------------------
Confidence 9999999999999999999999999999999999999999982
Q ss_pred HHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcC
Q 001888 597 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGD 676 (1000)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGD 676 (1000)
.++++++|++|..+++.++.. +.|+|+||
T Consensus 576 --------------------------------------------------~~~~~~~P~~K~~~v~~l~~~-~~v~~vGD 604 (723)
T 3j09_A 576 --------------------------------------------------LVIAEVLPHQKSEEVKKLQAK-EVVAFVGD 604 (723)
T ss_dssp --------------------------------------------------EEECSCCTTCHHHHHHHHTTT-CCEEEEEC
T ss_pred --------------------------------------------------EEEccCCHHHHHHHHHHHhcC-CeEEEEEC
Confidence 288999999999999999666 88999999
Q ss_pred CccChHHhhhcCccccccCccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHH
Q 001888 677 GANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFT 747 (1000)
Q Consensus 677 G~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~ 747 (1000)
|.||++||+.||+||+|++. ...++++||+++.+ ++.+.++ +.+||+.++++++++.|.+.+|++.+.+
T Consensus 605 g~ND~~al~~A~vgiamg~g-~~~a~~~AD~vl~~~~~~~i~~~-i~~~r~~~~~i~~nl~~a~~~n~~~i~~ 675 (723)
T 3j09_A 605 GINDAPALAQADLGIAVGSG-SDVAVESGDIVLIRDDLRDVVAA-IQLSRKTMSKIKQNIFWALIYNVILIPA 675 (723)
T ss_dssp SSTTHHHHHHSSEEEECCCC-SCCSSCCSSEECSSCCTTHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhhHHHHhhCCEEEEeCCC-cHHHHHhCCEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999643 33389999999964 7778888 8899999999999999999999985443
No 8
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=100.00 E-value=1.5e-51 Score=495.94 Aligned_cols=413 Identities=19% Similarity=0.235 Sum_probs=332.0
Q ss_pred EEEEEE-----CCccccC--CCCCeEEeceeecCCCeEEEEEEEecchh---hHhhcCCCCCCCccHHHHHHHHHHHHHH
Q 001888 47 VGTLQY-----EGKQYPL--SPQQILLRDSKLKNTDYVYGVVVFTGHDT---KVMQNATDPPSKRSKIERKMDKIVYLLF 116 (1000)
Q Consensus 47 ~G~~~~-----~~~~~~l--~~~n~l~~Gs~l~~tg~~~g~Vv~tG~~T---ki~~n~~~~~~k~s~l~~~~n~~~~~~~ 116 (1000)
+|...+ +||+.|+ ..++.+++||.+.+ |++.+.|++||.+| |+.+....++.+++++++.+++++.+++
T Consensus 173 ~G~~~VdeS~LTGES~Pv~K~~g~~v~~Gt~~~~-g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~ 251 (645)
T 3j08_A 173 EGESYVDESMISGEPVPVLKSKGDEVFGATINNT-GVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFI 251 (645)
T ss_dssp ECCEEEECHHHHCCSSCEEECTTCEECTTCEECS-SCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHH
T ss_pred ECcEEEEcccccCCCCceecCCCCEeeccEEEec-CcEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHH
Confidence 455555 4888887 55799999999995 99999999999999 6677778888899999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhcccccCCcccccccccCCCCccccCCCCchhHHHHHHHHHHHHhhccccceehhhHHHHHHHh
Q 001888 117 STLILISSTGSVFFGIETKRDIDGGKIRRWYLQPDDATVFYDPRRAPLAAFLHFLTGLMLYGYLIPISLYISIEIVKVLQ 196 (1000)
Q Consensus 117 ~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~~~~~~~~~ 196 (1000)
+++++++++++++|.++.+. +|.. .+.+++.+++.+|||+|+++++++...+
T Consensus 252 ~~vl~~a~~~~~~~~~~~~~--------~~~~--------------------~~~~~i~vlvia~P~aL~la~p~a~~~~ 303 (645)
T 3j08_A 252 PTVLLVAISAFIYWYFIAHA--------PLLF--------------------AFTTLIAVLVVACPCAFGLATPTALTVG 303 (645)
T ss_dssp HHHHHHHHHHHHCSSCCCSC--------SCCC--------------------TTTTTHHHHHHHSCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCC--------cHHH--------------------HHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 99999888887765443221 1211 3556788999999999999999999988
Q ss_pred HHHhhcccccccccCCCcceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcc
Q 001888 197 SVFINHDRDMYYEDTDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERT 276 (1000)
Q Consensus 197 ~~~i~~d~~m~~~~~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~ 276 (1000)
.. +| +++|+++|+++.+|+||++++||||||||||+|+|+|.++...+..
T Consensus 304 ~~------~~----a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~-------------------- 353 (645)
T 3j08_A 304 MG------KG----AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD-------------------- 353 (645)
T ss_dssp HH------HH----HTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEESSSC--------------------
T ss_pred HH------HH----HHCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeCCCC--------------------
Confidence 87 45 7889999999999999999999999999999999999999765311
Q ss_pred cccCCCCCCCCCCCCccccCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeCChh
Q 001888 277 FEVDDSQTDAPGLNGNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPD 356 (1000)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~ 356 (1000)
..+++...+.|.. .++||+
T Consensus 354 -----------------------------------------------~~~~l~~aa~~e~--------------~s~hPl 372 (645)
T 3j08_A 354 -----------------------------------------------ERELLRLAAIAER--------------RSEHPI 372 (645)
T ss_dssp -----------------------------------------------HHHHHHHHHHHHT--------------TCCSHH
T ss_pred -----------------------------------------------HHHHHHHHHHHhh--------------cCCChh
Confidence 0123444444422 257999
Q ss_pred HHHHHHHHHHcCcEEEeecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCCcEEEEEccchhHhHHH
Q 001888 357 EAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFER 436 (1000)
Q Consensus 357 e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~ 436 (1000)
+.|+++++++.|+.+... ..++. .+ .+.... . .+.+|+++.+.+.
T Consensus 373 a~Aiv~~a~~~g~~~~~~-------------------~~~~~---~~----g~g~~~------~---~v~~g~~~~~~~~ 417 (645)
T 3j08_A 373 AEAIVKKALEHGIELGEP-------------------EKVEV---IA----GEGVVA------D---GILVGNKRLMEDF 417 (645)
T ss_dssp HHHHHHHHHHTTCCCCSC-------------------CCCEE---ET----TTEEEE------T---TEEEECHHHHHHT
T ss_pred HHHHHHHHHhcCCCcCCc-------------------cceEE---ec----CCceEE------E---EEEECCHHHHHhc
Confidence 999999999988754221 11110 00 011100 1 2445887766442
Q ss_pred HhccChhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeee
Q 001888 437 LSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAV 516 (1000)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i 516 (1000)
.. ...+.+.+.+++++.+|+|++++|+ |++++|++++
T Consensus 418 ~~----~~~~~~~~~~~~~~~~g~~~l~va~---------------------------------------~~~~~G~i~~ 454 (645)
T 3j08_A 418 GV----AVSNEVELALEKLEREAKTAVIVAR---------------------------------------NGRVEGIIAV 454 (645)
T ss_dssp TC----CCCHHHHHHHHHHHTTTCCCEEEEE---------------------------------------TTEEEEEEEE
T ss_pred CC----CccHHHHHHHHHHHhcCCeEEEEEE---------------------------------------CCEEEEEEEe
Confidence 21 2345677788899999999999994 7899999999
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHH
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVT 596 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (1000)
+|++|++++++|+.|+++||+++|+|||+..+|..+|+++|+.
T Consensus 455 ~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------------------- 497 (645)
T 3j08_A 455 SDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------------- 497 (645)
T ss_dssp ECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-------------------------------------
T ss_pred cCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC-------------------------------------
Confidence 9999999999999999999999999999999999999999982
Q ss_pred HHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcC
Q 001888 597 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGD 676 (1000)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGD 676 (1000)
.++++++|++|..+++.++.. +.|+|+||
T Consensus 498 --------------------------------------------------~~~~~~~P~~K~~~v~~l~~~-~~v~~vGD 526 (645)
T 3j08_A 498 --------------------------------------------------LVIAEVLPHQKSEEVKKLQAK-EVVAFVGD 526 (645)
T ss_dssp --------------------------------------------------EEECSCCTTCHHHHHHHHTTT-CCEEEEEC
T ss_pred --------------------------------------------------EEEEeCCHHhHHHHHHHHhhC-CeEEEEeC
Confidence 288999999999999999666 89999999
Q ss_pred CccChHHhhhcCccccccCccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHH
Q 001888 677 GANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKNLTFGFT 747 (1000)
Q Consensus 677 G~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~ 747 (1000)
|.||++|++.||+||+|++. ...++++||+++.+ ++.+.++ +.+||+.++++++++.|.+.+|++.+.+
T Consensus 527 g~ND~~al~~A~vgiamg~g-~~~a~~~AD~vl~~~~~~~i~~~-i~~~r~~~~~i~~nl~~a~~~N~~~i~l 597 (645)
T 3j08_A 527 GINDAPALAQADLGIAVGSG-SDVAVESGDIVLIRDDLRDVVAA-IQLSRKTMSKIKQNIFWALIYNVILIPA 597 (645)
T ss_dssp SSSCHHHHHHSSEEEEECCC-SCCSSCCSSSEESSCCTTHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHhHHHHHHhCCEEEEeCCC-cHHHHHhCCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999643 33489999999964 7778888 8899999999999999999999885433
No 9
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=99.84 E-value=1.1e-25 Score=242.51 Aligned_cols=137 Identities=21% Similarity=0.305 Sum_probs=116.5
Q ss_pred cceeeEEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHH
Q 001888 507 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKEN 586 (1000)
Q Consensus 507 ~l~~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 586 (1000)
+-.+.|.+.+.|+++|++.++|+.|++.|++++|+|||+..++..+++.+|+..
T Consensus 124 ~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-------------------------- 177 (263)
T 2yj3_A 124 NGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE-------------------------- 177 (263)
Confidence 456789999999999999999999999999999999999999999999888721
Q ss_pred HHHHHHHHHHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhc
Q 001888 587 ITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKG 666 (1000)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~ 666 (1000)
+|..+.|+.|..+++.++.
T Consensus 178 -------------------------------------------------------------~f~~~~p~~k~~~~~~l~~ 196 (263)
T 2yj3_A 178 -------------------------------------------------------------YYSNLSPEDKVRIIEKLKQ 196 (263)
Confidence 2333448899999998876
Q ss_pred CCCEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEe--cchhhhHHHHHHhhhhhhhhhhh
Q 001888 667 TGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAI--AQFRFLERLLLVHGHWCYRRISM 732 (1000)
Q Consensus 667 ~~~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl--~~f~~l~~lll~~gR~~~~~i~~ 732 (1000)
.+..|+|||||.||++|++.||+||++.+. ...+...||+++ .++..+..+ +..+|..+++++.
T Consensus 197 ~~~~~~~VGD~~~D~~aa~~Agv~va~g~~-~~~~~~~ad~v~~~~~l~~l~~~-l~~~r~~~~~i~~ 262 (263)
T 2yj3_A 197 NGNKVLMIGDGVNDAAALALADVSVAMGNG-VDISKNVADIILVSNDIGTLLGL-IKNRKRLSNAIPS 262 (263)
Confidence 677899999999999999999999988543 233677899999 678888887 8899999888764
No 10
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=99.88 E-value=1.7e-21 Score=212.97 Aligned_cols=272 Identities=21% Similarity=0.255 Sum_probs=193.9
Q ss_pred CCCcceeccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcccccCCCCCCCCCCC
Q 001888 211 TDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLN 290 (1000)
Q Consensus 211 ~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1000)
+++|+++|+++++|+|++++.|+||||||||.+.+.+.++...+. ..
T Consensus 14 ~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~----~~----------------------------- 60 (287)
T 3a1c_A 14 AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG----DE----------------------------- 60 (287)
T ss_dssp CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS----CH-----------------------------
T ss_pred HHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC----CH-----------------------------
Confidence 889999999999999999999999999999999999988765431 00
Q ss_pred CccccCCCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeCChhHHHHHHHHHHcCcE
Q 001888 291 GNIVESGKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQ 370 (1000)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~ 370 (1000)
.+++ .+|.++ + ..+.||.+.|+.+++++.|+.
T Consensus 61 ----------------------------------~~~l---~~~~~~--e---------~~s~hp~~~a~~~~~~~~g~~ 92 (287)
T 3a1c_A 61 ----------------------------------RELL---RLAAIA--E---------RRSEHPIAEAIVKKALEHGIE 92 (287)
T ss_dssp ----------------------------------HHHH---HHHHHH--T---------TTCCSHHHHHHHHHHHHTTCC
T ss_pred ----------------------------------HHHH---HHHHHH--h---------hcCCCHHHHHHHHHHHhcCCC
Confidence 0112 222222 1 125799999999999998865
Q ss_pred EEeecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCCcEEEEEccchhHhHHHHhccChhhHHHHHH
Q 001888 371 FFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRR 450 (1000)
Q Consensus 371 ~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~ 450 (1000)
... ...+..+ + .+.+.. . .+.+|.++.+.+... ..++.+..
T Consensus 93 ~~~-------------------~~~~~~~---~----G~~~~~------~---~~~~g~~~~~~~~~~----~~~~~~~~ 133 (287)
T 3a1c_A 93 LGE-------------------PEKVEVI---A----GEGVVA------D---GILVGNKRLMEDFGV----AVSNEVEL 133 (287)
T ss_dssp CCC-------------------CSCEEEE---T----TTEEEE------T---TEEEECHHHHHHTTC----CCCHHHHH
T ss_pred ccc-------------------cccceee---c----CCCeEE------E---EEEECCHHHHHhcCC----CccHHHHH
Confidence 211 0111100 0 000000 1 123465543322111 11123455
Q ss_pred HHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeecccccCCcHHHHHH
Q 001888 451 HINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDK 530 (1000)
Q Consensus 451 ~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~lr~~v~e~I~~ 530 (1000)
..+.+..+|.+++++++ +..++|.+..+++++|++.++++.
T Consensus 134 ~~~~~~~~g~~~i~~~~---------------------------------------d~~~~~~~~~~~~~~~g~~~~l~~ 174 (287)
T 3a1c_A 134 ALEKLEREAKTAVIVAR---------------------------------------NGRVEGIIAVSDTLKESAKPAVQE 174 (287)
T ss_dssp HHHHHHHTTCEEEEEEE---------------------------------------TTEEEEEEEEECCBCTTHHHHHHH
T ss_pred HHHHHHhCCCeEEEEEE---------------------------------------CCEEEEEEEeccccchhHHHHHHH
Confidence 66778889999999994 567899999999999999999999
Q ss_pred HHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhhhhhhcccc
Q 001888 531 LAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAK 610 (1000)
Q Consensus 531 l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (1000)
|+++|+++.++||+....+..+.+.+|+..
T Consensus 175 L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-------------------------------------------------- 204 (287)
T 3a1c_A 175 LKRMGIKVGMITGDNWRSAEAISRELNLDL-------------------------------------------------- 204 (287)
T ss_dssp HHHTTCEEEEECSSCHHHHHHHHHHHTCSE--------------------------------------------------
T ss_pred HHHCCCeEEEEeCCCHHHHHHHHHHhCCce--------------------------------------------------
Confidence 999999999999999999999998888721
Q ss_pred cCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCccChHHhhhcCcc
Q 001888 611 ESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIG 690 (1000)
Q Consensus 611 ~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ND~~mlk~AdvG 690 (1000)
.|..+.|..|...++.+... ..|++|||+.||++|.+.||+|
T Consensus 205 -------------------------------------~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~ 246 (287)
T 3a1c_A 205 -------------------------------------VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLG 246 (287)
T ss_dssp -------------------------------------EECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEE
T ss_pred -------------------------------------eeeecChHHHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCee
Confidence 33444588899999988545 8899999999999999999999
Q ss_pred ccccCccccchhccCcEEe--cchhhhHHHHHHhhhhhhhhhh
Q 001888 691 VGISGVEGMQAVMSSDYAI--AQFRFLERLLLVHGHWCYRRIS 731 (1000)
Q Consensus 691 Ia~~g~e~~~ak~~aD~vl--~~f~~l~~lll~~gR~~~~~i~ 731 (1000)
|++.+.. ...+..||+++ .++..+..+ +..+|.++++++
T Consensus 247 v~~~~~~-~~~~~~ad~v~~~~~~~~l~~~-l~~~~~~~~~i~ 287 (287)
T 3a1c_A 247 IAVGSGS-DVAVESGDIVLIRDDLRDVVAA-IQLSRKTMSKIK 287 (287)
T ss_dssp EEECCCS-CCSSCCSSEEESSSCTHHHHHH-HHTTC-------
T ss_pred EEeCCCC-HHHHhhCCEEEeCCCHHHHHHH-HHHHHHHHHhhC
Confidence 9885432 22567899999 778888887 789999888764
No 11
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=99.84 E-value=2.3e-19 Score=195.28 Aligned_cols=274 Identities=22% Similarity=0.251 Sum_probs=186.1
Q ss_pred eccccccccccceeEEEEcCCCccccceeEEEEEEEcCeeeccchhHHHHHHHhhcCCcccccCCCCCCCCCCCCccccC
Q 001888 217 ARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSVAGVAYGRVMTEVERTLAKRKGERTFEVDDSQTDAPGLNGNIVES 296 (1000)
Q Consensus 217 v~~~~~~E~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1000)
+|+++++|.|++++.|+||++||||.|+|++.++...+. .
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~----~------------------------------------ 40 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH----S------------------------------------ 40 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS----C------------------------------------
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC----C------------------------------------
Confidence 478899999999999999999999999999998865432 0
Q ss_pred CCccCCcccCchhhhcccCCCCCChHHHHHHHHHHhhhcceeeccCCCCCceEEeeCChhHHHHHHHHHHcCcEEEeecC
Q 001888 297 GKSVKGFNFRDERIMNGQWVNEPHSDVIQKFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQ 376 (1000)
Q Consensus 297 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~ 376 (1000)
..+++..++.+.. .+.+|...++.++++..|+....
T Consensus 41 ---------------------------~~~~~~~~~~~~~--------------~s~~~~~~a~~~~~~~~g~~~~~--- 76 (280)
T 3skx_A 41 ---------------------------EDELLQIAASLEA--------------RSEHPIAAAIVEEAEKRGFGLTE--- 76 (280)
T ss_dssp ---------------------------HHHHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCC---
T ss_pred ---------------------------HHHHHHHHHHhhc--------------cCCCHHHHHHHHHHHhcCCCCCC---
Confidence 0122233222211 14688999999999998865321
Q ss_pred CeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCCcEEEEEccchhHhHHHHhccChhhHHHHHHHHHHHH
Q 001888 377 TSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKHGQQFEAETRRHINRYA 456 (1000)
Q Consensus 377 ~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~ 456 (1000)
...+. .++ .+.+...+ ++.. +..|.++.+........ .....+.
T Consensus 77 ----------------~~~~~---~~~----g~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~--------~~~~~~~ 120 (280)
T 3skx_A 77 ----------------VEEFR---AIP----GKGVEGIV---NGRR--YMVVSPGYIRELGIKTD--------ESVEKLK 120 (280)
T ss_dssp ----------------CEEEE---EET----TTEEEEEE---TTEE--EEEECHHHHHHTTCCCC--------TTHHHHH
T ss_pred ----------------cccee---ecC----CCEEEEEE---CCEE--EEEecHHHHHHcCCCch--------HHHHHHH
Confidence 11111 111 11122222 1221 22366655543322111 2334567
Q ss_pred HccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeecccccCCcHHHHHHHHHcCC
Q 001888 457 EAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQAGI 536 (1000)
Q Consensus 457 ~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~lr~~v~e~I~~l~~aGI 536 (1000)
.++.+++.+++ +..++|.+.+.++++|++.++++.|++.|+
T Consensus 121 ~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~ 161 (280)
T 3skx_A 121 QQGKTVVFILK---------------------------------------NGEVSGVIALADRIRPESREAISKLKAIGI 161 (280)
T ss_dssp TTTCEEEEEEE---------------------------------------TTEEEEEEEEEEEECTTHHHHHHHHHHTTC
T ss_pred hCCCeEEEEEE---------------------------------------CCEEEEEEEecCCCCHhHHHHHHHHHHCCC
Confidence 78888888873 567899999999999999999999999999
Q ss_pred eEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhhhhhhcccccCccce
Q 001888 537 KVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVNSAKESKVTF 616 (1000)
Q Consensus 537 kv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (1000)
++.++||+....+..+.+.+|+..
T Consensus 162 ~~~i~T~~~~~~~~~~~~~~gl~~-------------------------------------------------------- 185 (280)
T 3skx_A 162 KCMMLTGDNRFVAKWVAEELGLDD-------------------------------------------------------- 185 (280)
T ss_dssp EEEEECSSCHHHHHHHHHHHTCSE--------------------------------------------------------
T ss_pred EEEEEeCCCHHHHHHHHHHcCChh--------------------------------------------------------
Confidence 999999999999999999888731
Q ss_pred EEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCccChHHhhhcCccccccCc
Q 001888 617 GLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEADIGVGISGV 696 (1000)
Q Consensus 617 ~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ND~~mlk~AdvGIa~~g~ 696 (1000)
.|..+.|.+|...++-+.... .++|||||.||++|++.||+||+|.+.
T Consensus 186 -------------------------------~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~~~~~Ag~~va~~~~ 233 (280)
T 3skx_A 186 -------------------------------YFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAPALAQADVGIAIGAG 233 (280)
T ss_dssp -------------------------------EECSCCGGGHHHHHHHHHTTS-CEEEEECTTTTHHHHHHSSEEEECSCC
T ss_pred -------------------------------HhHhcCHHHHHHHHHHHHhcC-CEEEEeCCchhHHHHHhCCceEEecCC
Confidence 444556778888888874443 579999999999999999999999654
Q ss_pred cccchhccCcEEe--cchhhhHHHHHHhhhhhhhhhhhHHHHHHH
Q 001888 697 EGMQAVMSSDYAI--AQFRFLERLLLVHGHWCYRRISMMICYFFY 739 (1000)
Q Consensus 697 e~~~ak~~aD~vl--~~f~~l~~lll~~gR~~~~~i~~~i~~~~~ 739 (1000)
.. .++..||+++ .++..+..+ +..+|..+++++..+.|.+.
T Consensus 234 ~~-~~~~~a~~~~~~~~~~~l~~~-l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 234 TD-VAVETADIVLVRNDPRDVAAI-VELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp SS-SCCCSSSEECSSCCTHHHHHH-HHHHHTCCC-----------
T ss_pred cH-HHHhhCCEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 33 3788899998 567778888 78899999888887777653
No 12
>3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli}
Probab=99.75 E-value=3.9e-19 Score=175.94 Aligned_cols=140 Identities=21% Similarity=0.259 Sum_probs=110.0
Q ss_pred HHHHHHhhhcceeeccCCCCCceEEeeCChhHHHHHHHHHHcCcEEEeecCCeeEEEecCCCCCccccEEEEEEEeeCCC
Q 001888 326 KFFRVLAICHTAIPDVNEETGEISYEAESPDEAAFVIAAREVGFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFT 405 (1000)
Q Consensus 326 ~~~~~l~lC~~~~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~ 405 (1000)
+++...+||+..... .++|.|.||++++...+.. .....|+++.++|||
T Consensus 17 ~vl~~a~L~s~~~~~-----------~~n~~d~Ail~~~~~~~~~--------------------~~~~~~~~~~eiPFd 65 (170)
T 3gwi_A 17 RVLHSAWLNSHYQTG-----------LKNLLDTAVLEGTDEESAR--------------------SLASRWQKIDEIPFD 65 (170)
T ss_dssp HHHHHHHHHHHHCCS-----------CCCHHHHHHHHTSCHHHHH--------------------HHHHHSEEEEEECCC
T ss_pred HHHHHHHHcCCCCCC-----------CCChHHHHHHHHHHhcChh--------------------hhhhcCeEEeeEecC
Confidence 567777888754221 3699999999987543211 014678999999999
Q ss_pred CCCceEEEEEEcCCCcEEEEEccchhHhHHHHhcc---------ChhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHH
Q 001888 406 SSRKRMSVMVRNPENQLLLLCKGADSVMFERLSKH---------GQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYR 476 (1000)
Q Consensus 406 s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~ 476 (1000)
|+||||||+++.+++++++|+|||||.|+++|+.. +++.++++.+.++.|+.+|+|||++|||.++.++..
T Consensus 66 s~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~ 145 (170)
T 3gwi_A 66 FERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGD 145 (170)
T ss_dssp TTTCEEEEEEESSSSEEEEEEEECHHHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSC
T ss_pred cccCcEEEEEEeCCCCEEEEEcCCcHHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccc
Confidence 99999999999877889999999999999999752 345678899999999999999999999998754210
Q ss_pred HHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeeccc
Q 001888 477 IWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDK 519 (1000)
Q Consensus 477 ~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~ 519 (1000)
.....|+||+|+|++|+-|.
T Consensus 146 -----------------------~~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 146 -----------------------YQRADESDLILEGYIAFLDH 165 (170)
T ss_dssp -----------------------CCGGGSCSEEEEEEEEEEC-
T ss_pred -----------------------cCccccCCcEEEehhccccc
Confidence 01235899999999999875
No 13
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=99.38 E-value=1.8e-13 Score=150.01 Aligned_cols=143 Identities=13% Similarity=0.114 Sum_probs=101.7
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHH
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVT 596 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (1000)
.+++||+++++++.|+++|+++.|+|||...++.++++++|+..++..+........
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~----------------------- 195 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFD----------------------- 195 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEEC-----------------------
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEc-----------------------
Confidence 579999999999999999999999999999999999999998765533322110000
Q ss_pred HHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcC
Q 001888 597 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGD 676 (1000)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGD 676 (1000)
.......+.+... ..+++..|.+|...+..++..++.|+|+||
T Consensus 196 ----------------~~~~~~~~~~~~i---------------------~~~~k~~~~~k~~~~~~~~~~~~~v~~vGD 238 (297)
T 4fe3_A 196 ----------------ENGVLKGFKGELI---------------------HVFNKHDGALKNTDYFSQLKDNSNIILLGD 238 (297)
T ss_dssp ----------------TTSBEEEECSSCC---------------------CTTCHHHHHHTCHHHHHHTTTCCEEEEEES
T ss_pred ----------------ccceeEecccccc---------------------chhhcccHHHHHHHHHHhhccCCEEEEEeC
Confidence 0000011111111 134555678888888888888899999999
Q ss_pred CccChHHhh---hcCcccccc--Ccc----ccchhccCcEEecchhh--hHHHH
Q 001888 677 GANDVGMLQ---EADIGVGIS--GVE----GMQAVMSSDYAIAQFRF--LERLL 719 (1000)
Q Consensus 677 G~ND~~mlk---~AdvGIa~~--g~e----~~~ak~~aD~vl~~f~~--l~~ll 719 (1000)
|.||+||++ .||+||+|+ +.+ ...+++++|+||.++++ +++.+
T Consensus 239 GiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~i 292 (297)
T 4fe3_A 239 SQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSI 292 (297)
T ss_dssp SGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHHH
T ss_pred cHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHHH
Confidence 999999955 999999884 111 12268999999998554 55553
No 14
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=99.01 E-value=3.3e-10 Score=114.96 Aligned_cols=136 Identities=10% Similarity=0.081 Sum_probs=100.2
Q ss_pred eeeEEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHH
Q 001888 509 ILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENIT 588 (1000)
Q Consensus 509 ~~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 588 (1000)
..++...++|.+ +|+.|+++|+++.++||+....+..+++.+|+..
T Consensus 42 ~~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~---------------------------- 87 (189)
T 3mn1_A 42 SEIKTFNTLDGQ------GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH---------------------------- 87 (189)
T ss_dssp CEEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE----------------------------
T ss_pred cEeeeeccccHH------HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH----------------------------
Confidence 345555555544 9999999999999999999999999999999832
Q ss_pred HHHHHHHHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hcC
Q 001888 589 KVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGT 667 (1000)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~~ 667 (1000)
++... ..|...++.+ +..
T Consensus 88 -----------------------------------------------------------~f~~~--~~K~~~~~~~~~~~ 106 (189)
T 3mn1_A 88 -----------------------------------------------------------LFQGR--EDKLVVLDKLLAEL 106 (189)
T ss_dssp -----------------------------------------------------------EECSC--SCHHHHHHHHHHHH
T ss_pred -----------------------------------------------------------HhcCc--CChHHHHHHHHHHc
Confidence 11111 3455555554 333
Q ss_pred ---CCEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecc------hhhhHHHHHHhhhhhhhhhhhHHHHHH
Q 001888 668 ---GKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ------FRFLERLLLVHGHWCYRRISMMICYFF 738 (1000)
Q Consensus 668 ---~~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~------f~~l~~lll~~gR~~~~~i~~~i~~~~ 738 (1000)
...+++|||+.||++|++.||+|+++.+... .++..||+++.+ ...+.++ +..+|..+.++.+.+.|.+
T Consensus 107 g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~~~~-~~~~~ad~v~~~~~~~G~~~~l~~~-l~~~~~~~~~~~~~~~~~~ 184 (189)
T 3mn1_A 107 QLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAAS-FVREHAHGITRAQGGEGAAREFCEL-ILSAQGNLEAAHSVYLEGH 184 (189)
T ss_dssp TCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHTSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHHHHTTSTTC
T ss_pred CCChhHEEEECCCHHHHHHHHHCCCeEEeCCccH-HHHHhCCEEecCCCCCcHHHHHHHH-HHHccCcHHHHHHHHhccc
Confidence 3679999999999999999999999865433 378899999987 4557676 5667888888888777765
Q ss_pred HHH
Q 001888 739 YKN 741 (1000)
Q Consensus 739 ~~n 741 (1000)
..|
T Consensus 185 ~~~ 187 (189)
T 3mn1_A 185 HHH 187 (189)
T ss_dssp ---
T ss_pred ccc
Confidence 544
No 15
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=98.93 E-value=2.5e-10 Score=123.62 Aligned_cols=69 Identities=32% Similarity=0.524 Sum_probs=50.4
Q ss_pred hHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecchhh------hHHHHHHhhhh
Q 001888 656 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRF------LERLLLVHGHW 725 (1000)
Q Consensus 656 qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~~------l~~lll~~gR~ 725 (1000)
.|...++.+ +..| ..|+||||+.||++|++.|++||+|+++... ++..||+++.+... +.+++..+|+.
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~-~k~~A~~v~~~~~e~Gv~~~i~~~~~~~~~~ 275 (279)
T 4dw8_A 197 DKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEP-VKKAADYITLTNDEDGVAEAIERIFNVEGHH 275 (279)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHHHCSEECCCGGGTHHHHHHHHHC------
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcHH-HHHhCCEEcCCCCCcHHHHHHHHHHhccccc
Confidence 688888888 5544 4699999999999999999999999765543 89999999976332 55555566653
No 16
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=98.88 E-value=9.2e-10 Score=119.16 Aligned_cols=68 Identities=19% Similarity=0.286 Sum_probs=43.0
Q ss_pred hHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecchh------hhHHHHHHhhh
Q 001888 656 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFR------FLERLLLVHGH 724 (1000)
Q Consensus 656 qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~------~l~~lll~~gR 724 (1000)
.|+..++.+ +..| ..|++|||+.||++|++.|++||+|+++... ++..||++..+.. .+.++++-+|+
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~-~k~~A~~v~~~~~e~Gv~~~i~~~~~~~~~ 274 (279)
T 3mpo_A 197 SKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDE-VKEAAQAVTLTNAENGVAAAIRKYALNEGH 274 (279)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCH-HHHHCSCBC------CHHHHHC--------
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHH-HHHhcceeccCCCccHHHHHHHHHhcccCc
Confidence 499988888 6655 5699999999999999999999999765544 8999999987622 24444455554
No 17
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=98.84 E-value=1.2e-09 Score=119.00 Aligned_cols=74 Identities=18% Similarity=0.218 Sum_probs=54.6
Q ss_pred hhHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecchhh------hHHHHHHhhh
Q 001888 655 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRF------LERLLLVHGH 724 (1000)
Q Consensus 655 ~qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~~------l~~lll~~gR 724 (1000)
..|+..++.+ +..| ..|++|||+.||++|++.|++||+|+++... ++..||++..+... +.+++...++
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~-~k~~Ad~v~~s~~edGv~~~i~~~~~~~~~ 279 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPE-IKRKADWVTRSNDEQGVAYMMKEYFRMQQR 279 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHHHSSEECCCTTTTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHH-HHHhcCEECCCCCccHHHHHHHHHHHhcCc
Confidence 4699988888 6655 4699999999999999999999999766544 89999999876332 4555455555
Q ss_pred hhhhh
Q 001888 725 WCYRR 729 (1000)
Q Consensus 725 ~~~~~ 729 (1000)
+-|.+
T Consensus 280 ~~~~~ 284 (290)
T 3dnp_A 280 KGFLD 284 (290)
T ss_dssp C----
T ss_pred ccHHh
Confidence 54443
No 18
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=98.80 E-value=5.8e-09 Score=113.12 Aligned_cols=57 Identities=21% Similarity=0.279 Sum_probs=48.4
Q ss_pred hhHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecch
Q 001888 655 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQF 712 (1000)
Q Consensus 655 ~qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f 712 (1000)
..|+..++.+ +..| ..|+||||+.||++|++.|++||+|+++... ++..||++..+-
T Consensus 210 ~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~-~k~~A~~v~~s~ 270 (283)
T 3dao_A 210 VSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQE-VIAAAKHTCAPY 270 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHH-HHHHSSEEECCG
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHH-HHHhcCeECCCC
Confidence 3599998888 6665 5699999999999999999999999776544 899999998763
No 19
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=98.79 E-value=3.9e-09 Score=107.22 Aligned_cols=95 Identities=18% Similarity=0.179 Sum_probs=73.8
Q ss_pred HHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhhhhhh
Q 001888 527 CIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQV 606 (1000)
Q Consensus 527 ~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 606 (1000)
+|+.|+++|+++.++||+....+..+++.+|+..
T Consensus 60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~---------------------------------------------- 93 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGRRSQIVENRMKALGISL---------------------------------------------- 93 (195)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE----------------------------------------------
Confidence 4999999999999999999999999999999832
Q ss_pred cccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hc---CCCEEEEEcCCccChH
Q 001888 607 NSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KG---TGKTTLAIGDGANDVG 682 (1000)
Q Consensus 607 ~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~---~~~~vlaiGDG~ND~~ 682 (1000)
++... ..|...++.+ +. ....+++|||+.||++
T Consensus 94 -----------------------------------------~~~~~--k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~ 130 (195)
T 3n07_A 94 -----------------------------------------IYQGQ--DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWP 130 (195)
T ss_dssp -----------------------------------------EECSC--SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHH
T ss_pred -----------------------------------------EeeCC--CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHH
Confidence 11111 2344444444 33 2356999999999999
Q ss_pred HhhhcCccccccCccccchhccCcEEecc
Q 001888 683 MLQEADIGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 683 mlk~AdvGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
|++.|++++++.+... .++..||+++.+
T Consensus 131 ~~~~ag~~va~~na~~-~~~~~ad~v~~~ 158 (195)
T 3n07_A 131 VMEKVALRVCVADGHP-LLAQRANYVTHI 158 (195)
T ss_dssp HHTTSSEEEECTTSCH-HHHHHCSEECSS
T ss_pred HHHHCCCEEEECChHH-HHHHhCCEEEcC
Confidence 9999999999965543 378899999976
No 20
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=98.79 E-value=1.1e-08 Score=102.73 Aligned_cols=128 Identities=14% Similarity=0.078 Sum_probs=91.6
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHH
Q 001888 520 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQI 599 (1000)
Q Consensus 520 lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (1000)
+.+++.++|+.|+++|++++++||++...+..+++.+|+... +
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~------~------------------------------- 78 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLF------F------------------------------- 78 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEE------E-------------------------------
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCcee------e-------------------------------
Confidence 445677999999999999999999999999999999987320 0
Q ss_pred HhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hcCC---CEEEEEc
Q 001888 600 REGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAIG 675 (1000)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~~~---~~vlaiG 675 (1000)
++ ...|...++.+ +..+ ..|++||
T Consensus 79 ---------------------~~-------------------------------~k~k~~~~~~~~~~~~~~~~~~~~vG 106 (180)
T 1k1e_A 79 ---------------------LG-------------------------------KLEKETACFDLMKQAGVTAEQTAYIG 106 (180)
T ss_dssp ---------------------ES-------------------------------CSCHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred ---------------------cC-------------------------------CCCcHHHHHHHHHHcCCCHHHEEEEC
Confidence 00 12344444443 3333 5799999
Q ss_pred CCccChHHhhhcCccccccCccccchhccCcEEecchh------hhHHHHHHhhhhhhhhhhhHHHHHH
Q 001888 676 DGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFR------FLERLLLVHGHWCYRRISMMICYFF 738 (1000)
Q Consensus 676 DG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~------~l~~lll~~gR~~~~~i~~~i~~~~ 738 (1000)
|+.||++|++.|++++++.+... .++..||+++.+.. .+.+. +...|..+.++...+.|..
T Consensus 107 D~~~Di~~~~~ag~~~~~~~~~~-~~~~~ad~v~~~~~~~g~~~~~~~~-~l~~~~~~~~~~~~~~~~~ 173 (180)
T 1k1e_A 107 DDSVDLPAFAACGTSFAVADAPI-YVKNAVDHVLSTHGGKGAFREMSDM-ILQAQGKSSVFDTAQGFLK 173 (180)
T ss_dssp CSGGGHHHHHHSSEEEECTTSCH-HHHTTSSEECSSCTTTTHHHHHHHH-HHHHTTCTHHHHCHHHHHH
T ss_pred CCHHHHHHHHHcCCeEEeCCccH-HHHhhCCEEecCCCCCcHHHHHHHH-HHHhcCchhhhhhccchhh
Confidence 99999999999999999865433 36788999998742 23333 3445666777766666554
No 21
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=98.76 E-value=6.9e-09 Score=115.46 Aligned_cols=149 Identities=20% Similarity=0.168 Sum_probs=94.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.++++.|+++|+++.++||+....+..++..+|+..--...+.+...
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~--------------------------- 230 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSG--------------------------- 230 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT---------------------------
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCC---------------------------
Confidence 68999999999999999999999999999999999999984321111111100
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEE-cCChhhHHHHHHHH-hc---CCCEEEE
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICC-RSSPKQKALVTRLV-KG---TGKTTLA 673 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~-r~sp~qK~~iV~~l-~~---~~~~vla 673 (1000)
.++|. +.. -..+..|..+++.+ +. ....|++
T Consensus 231 --------------------~~tg~------------------------~~~~~~~~kpk~~~~~~~~~~lgi~~~~~v~ 266 (335)
T 3n28_A 231 --------------------KLTGQ------------------------VLGEVVSAQTKADILLTLAQQYDVEIHNTVA 266 (335)
T ss_dssp --------------------EEEEE------------------------EESCCCCHHHHHHHHHHHHHHHTCCGGGEEE
T ss_pred --------------------eeeee------------------------ecccccChhhhHHHHHHHHHHcCCChhhEEE
Confidence 00110 000 01133455544444 33 3367999
Q ss_pred EcCCccChHHhhhcCccccccCccccchhccCcEEecc--hhhhHHHHHHhhhhhhhhhhhHHHHHHHHH
Q 001888 674 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWCYRRISMMICYFFYKN 741 (1000)
Q Consensus 674 iGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n 741 (1000)
||||.||++|++.||+||+|.+.+. ++..||+++.. +..+..+ +......-.|++..+.+.+.+|
T Consensus 267 vGDs~nDi~~a~~aG~~va~~~~~~--~~~~a~~v~~~~~l~~v~~~-L~~~l~~~~r~~~~~~~~~~~~ 333 (335)
T 3n28_A 267 VGDGANDLVMMAAAGLGVAYHAKPK--VEAKAQTAVRFAGLGGVVCI-LSAALVAQQKLSWKSKEGHHHH 333 (335)
T ss_dssp EECSGGGHHHHHHSSEEEEESCCHH--HHTTSSEEESSSCTHHHHHH-HHHHHHHTTCCCCC--------
T ss_pred EeCCHHHHHHHHHCCCeEEeCCCHH--HHhhCCEEEecCCHHHHHHH-HHhHHHHhhhhccccccccccc
Confidence 9999999999999999999944443 78899999853 4445444 3333344456666666665443
No 22
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=98.76 E-value=1.1e-08 Score=100.89 Aligned_cols=106 Identities=17% Similarity=0.119 Sum_probs=79.9
Q ss_pred cceeeEEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHH--HcCccccCceEEEEecCCchhhHhhhhccH
Q 001888 507 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGY--ACSLLRQEMKQIVITLDSPDMEALEKQGDK 584 (1000)
Q Consensus 507 ~l~~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~--~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~ 584 (1000)
+...++.+.++|.. +|+.|+++|+++.++||+ ..+..+++ .+|+. .
T Consensus 30 ~g~~~~~f~~~D~~------~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-----~------------------- 77 (168)
T 3ewi_A 30 DQKEIISYDVKDAI------GISLLKKSGIEVRLISER--ACSKQTLSALKLDCK-----T------------------- 77 (168)
T ss_dssp SCCCEEEEEHHHHH------HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-----E-------------------
T ss_pred CCCEEEEEecCcHH------HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-----E-------------------
Confidence 44567777777773 899999999999999999 67777887 44441 0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH
Q 001888 585 ENITKVSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV 664 (1000)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l 664 (1000)
+ ..+..|...++.+
T Consensus 78 ----------------------------------------------------------------~--~g~~~K~~~l~~~ 91 (168)
T 3ewi_A 78 ----------------------------------------------------------------E--VSVSDKLATVDEW 91 (168)
T ss_dssp ----------------------------------------------------------------E--CSCSCHHHHHHHH
T ss_pred ----------------------------------------------------------------E--ECCCChHHHHHHH
Confidence 0 0123466666555
Q ss_pred -hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecc
Q 001888 665 -KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 665 -~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
+..| ..+++|||+.||++|++.|+++++|.+... .++..||+++.+
T Consensus 92 ~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~na~~-~~k~~Ad~v~~~ 141 (168)
T 3ewi_A 92 RKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACS-GAQKAVGYICKC 141 (168)
T ss_dssp HHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECTTCCH-HHHTTCSEECSS
T ss_pred HHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeCChhH-HHHHhCCEEeCC
Confidence 4443 569999999999999999999999965543 389999999975
No 23
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=98.72 E-value=6e-09 Score=108.88 Aligned_cols=175 Identities=11% Similarity=0.056 Sum_probs=95.6
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccc----cCceEEEE-ecCCc-hhhHhhhhccHHHHHHH
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR----QEMKQIVI-TLDSP-DMEALEKQGDKENITKV 590 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~----~~~~~~~i-~~~~~-~~~~~~~~~~~~~~~~~ 590 (1000)
..++.+++.++|++|+++|++++++|||....+..+++.+|+.. .++..+.. +++.. ....+ +...
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l------~~~~-- 91 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNE------GTNK-- 91 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSH------HHHH--
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccH------HHHH--
Confidence 44678889999999999999999999999999999999988642 12222211 11100 00111 1111
Q ss_pred HHHHHHHHHHhhh-h--hhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCce---EEEcCCh--hhHHHHHH
Q 001888 591 SLESVTKQIREGI-S--QVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASV---ICCRSSP--KQKALVTR 662 (1000)
Q Consensus 591 ~~~~~~~~~~~~~-~--~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~v---i~~r~sp--~qK~~iV~ 662 (1000)
.+ ..+.... . .+.... ....... + .+ ....+..+.+.... ....+ -+..+.| ..|...++
T Consensus 92 ---~i-~~~~~~~~~~~~~~~~~-~~~~~~~-~---~~--~~~~~~~~~~~~~~-~~~~~~~~~~~ei~~~~~~K~~~l~ 159 (227)
T 1l6r_A 92 ---FL-EEMSKRTSMRSILTNRW-REASTGF-D---ID--PEDVDYVRKEAESR-GFVIFYSGYSWHLMNRGEDKAFAVN 159 (227)
T ss_dssp ---HH-HHHTTTSSCBCCGGGGG-CSSSEEE-B---CC--GGGHHHHHHHHHTT-TEEEEEETTEEEEEETTCSHHHHHH
T ss_pred ---HH-HHHHHHhcCCccccccc-eecccce-E---Ee--cCCHHHHHHHHHhc-CEEEEecCcEEEEecCCCCHHHHHH
Confidence 11 1110000 0 000000 0000000 0 00 00111111111110 11100 0123335 57999888
Q ss_pred HH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecch
Q 001888 663 LV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQF 712 (1000)
Q Consensus 663 ~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f 712 (1000)
.+ +..| ..++++|||.||++|++.|++||+|++... .++..||+++.+.
T Consensus 160 ~l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va~~n~~~-~~k~~a~~v~~~~ 212 (227)
T 1l6r_A 160 KLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATD-NIKAVSDFVSDYS 212 (227)
T ss_dssp HHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCH-HHHHHCSEECSCC
T ss_pred HHHHHhCcCHHHEEEECCcHHhHHHHHHcCceEEecCchH-HHHHhCCEEecCC
Confidence 88 5544 569999999999999999999999965543 3788899998763
No 24
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=98.71 E-value=2.6e-08 Score=102.46 Aligned_cols=107 Identities=16% Similarity=0.166 Sum_probs=81.3
Q ss_pred eeEEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHH
Q 001888 510 LLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITK 589 (1000)
Q Consensus 510 ~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 589 (1000)
.+....+.|.+ +|+.|+++|+++.++||+....+..+++.+|+..
T Consensus 73 ~~~~~~~~d~~------~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~----------------------------- 117 (211)
T 3ij5_A 73 ELKAFNVRDGY------GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH----------------------------- 117 (211)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE-----------------------------
T ss_pred HHHHhccchHH------HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch-----------------------------
Confidence 34455555555 9999999999999999999999999999999832
Q ss_pred HHHHHHHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hc--
Q 001888 590 VSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KG-- 666 (1000)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~-- 666 (1000)
++... ..|..+++.+ +.
T Consensus 118 ----------------------------------------------------------~f~~~--k~K~~~l~~~~~~lg 137 (211)
T 3ij5_A 118 ----------------------------------------------------------LYQGQ--SDKLVAYHELLATLQ 137 (211)
T ss_dssp ----------------------------------------------------------EECSC--SSHHHHHHHHHHHHT
T ss_pred ----------------------------------------------------------hhccc--CChHHHHHHHHHHcC
Confidence 11111 3455555554 33
Q ss_pred -CCCEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecch
Q 001888 667 -TGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQF 712 (1000)
Q Consensus 667 -~~~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f 712 (1000)
....|++|||+.||++|++.|++++++.+... .++..||+++.+.
T Consensus 138 ~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~~~-~~~~~Ad~v~~~~ 183 (211)
T 3ij5_A 138 CQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHP-LLLPKAHYVTRIK 183 (211)
T ss_dssp CCGGGEEEEECSGGGHHHHTTSSEEEECTTSCT-TTGGGSSEECSSC
T ss_pred cCcceEEEEcCCHHHHHHHHHCCCEEEeCCccH-HHHhhCCEEEeCC
Confidence 24679999999999999999999999965443 3788999999763
No 25
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=98.71 E-value=2.7e-08 Score=99.45 Aligned_cols=114 Identities=14% Similarity=0.175 Sum_probs=83.8
Q ss_pred eeEEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHH
Q 001888 510 LLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITK 589 (1000)
Q Consensus 510 ~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 589 (1000)
.+....+.|.+ +|+.|+++|+++.++||+....+..+++.+|+. .+.
T Consensus 36 ~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-------~~~-------------------- 82 (176)
T 3mmz_A 36 EFVSVHRGDGL------GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-------VLH-------------------- 82 (176)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-------EEE--------------------
T ss_pred HhHhcccccHH------HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-------eEe--------------------
Confidence 34444555544 899999999999999999999999999999873 000
Q ss_pred HHHHHHHHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hcC-
Q 001888 590 VSLESVTKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGT- 667 (1000)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~~- 667 (1000)
.. ..|...++.+ +..
T Consensus 83 -------------------------------------------------------------~~--~~k~~~l~~~~~~~~ 99 (176)
T 3mmz_A 83 -------------------------------------------------------------GI--DRKDLALKQWCEEQG 99 (176)
T ss_dssp -------------------------------------------------------------SC--SCHHHHHHHHHHHHT
T ss_pred -------------------------------------------------------------CC--CChHHHHHHHHHHcC
Confidence 00 2344444444 333
Q ss_pred --CCEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecc------hhhhHHHHH
Q 001888 668 --GKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ------FRFLERLLL 720 (1000)
Q Consensus 668 --~~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~------f~~l~~lll 720 (1000)
...++++||+.||++|++.|++|+++.+... .++..||+++.+ ...+.++|+
T Consensus 100 ~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~~~~-~~~~~ad~v~~~~~~~g~~~~l~~~l~ 159 (176)
T 3mmz_A 100 IAPERVLYVGNDVNDLPCFALVGWPVAVASAHD-VVRGAARAVTTVPGGDGAIREIASWIL 159 (176)
T ss_dssp CCGGGEEEEECSGGGHHHHHHSSEEEECTTCCH-HHHHHSSEECSSCTTTTHHHHHHHHHH
T ss_pred CCHHHEEEEcCCHHHHHHHHHCCCeEECCChhH-HHHHhCCEEecCCCCCcHHHHHHHHHH
Confidence 3569999999999999999999999965433 378889999987 555666643
No 26
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=98.66 E-value=8.1e-08 Score=102.44 Aligned_cols=56 Identities=29% Similarity=0.427 Sum_probs=46.2
Q ss_pred hHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecch
Q 001888 656 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQF 712 (1000)
Q Consensus 656 qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f 712 (1000)
.|+..++.+ +..| ..|+|||||.||++|++.|++||+|+++. ..++..||++..+.
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~na~-~~~k~~A~~v~~~~ 242 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAH-EEVKRVADFVTKPV 242 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETTCC-HHHHHTCSEEECCG
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCCCc-HHHHHhCCEEeCCC
Confidence 588888887 5544 56999999999999999999999996543 34889999998763
No 27
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=98.66 E-value=3.1e-09 Score=116.62 Aligned_cols=58 Identities=21% Similarity=0.292 Sum_probs=48.8
Q ss_pred hhHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecchh
Q 001888 655 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFR 713 (1000)
Q Consensus 655 ~qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~ 713 (1000)
..|+..++.+ +..| ..|++|||+.||++|++.|++||+|+++... ++..||+++.+..
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~-~k~~Ad~v~~~~~ 288 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKN-VKAAANYQAKSND 288 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCHH-HHHHCSEECCCGG
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCHH-HHHhccEEcCCCC
Confidence 4699888888 6655 5699999999999999999999999766544 8999999987633
No 28
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=98.65 E-value=2.7e-08 Score=100.83 Aligned_cols=116 Identities=17% Similarity=0.178 Sum_probs=83.1
Q ss_pred HHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhhhhhhc
Q 001888 528 IDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQVN 607 (1000)
Q Consensus 528 I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 607 (1000)
|+.|+++|+++.++||+....+..+++.+|+..- +
T Consensus 55 l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~------~--------------------------------------- 89 (191)
T 3n1u_A 55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHY------Y--------------------------------------- 89 (191)
T ss_dssp HHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEE------E---------------------------------------
T ss_pred HHHHHHCCCeEEEEeCcChHHHHHHHHHcCCccc------e---------------------------------------
Confidence 9999999999999999999999999999988420 0
Q ss_pred ccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCccChHHhhhc
Q 001888 608 SAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGANDVGMLQEA 687 (1000)
Q Consensus 608 ~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ND~~mlk~A 687 (1000)
++ ....|+-...+++.+.-....+++|||+.||++|++.|
T Consensus 90 -------------~~---------------------------~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~a 129 (191)
T 3n1u_A 90 -------------KG---------------------------QVDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQV 129 (191)
T ss_dssp -------------CS---------------------------CSSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHS
T ss_pred -------------eC---------------------------CCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHC
Confidence 00 01123333344444433446799999999999999999
Q ss_pred CccccccCccccchhccCcEEecc------hhhhHHHHHHhhhhhhhhh
Q 001888 688 DIGVGISGVEGMQAVMSSDYAIAQ------FRFLERLLLVHGHWCYRRI 730 (1000)
Q Consensus 688 dvGIa~~g~e~~~ak~~aD~vl~~------f~~l~~lll~~gR~~~~~i 730 (1000)
|+++++.+... .++..||+++.+ ...+.+. +...|..+.++
T Consensus 130 g~~~~~~~~~~-~~~~~ad~v~~~~~~~g~~~~l~~~-ll~~~~~~~~~ 176 (191)
T 3n1u_A 130 GLGVAVSNAVP-QVLEFADWRTERTGGRGAVRELCDL-ILNAQNKAELA 176 (191)
T ss_dssp SEEEECTTCCH-HHHHHSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHH
T ss_pred CCEEEeCCccH-HHHHhCCEEecCCCCCcHHHHHHHH-HHHhcCcHHHH
Confidence 99999865443 378899999987 3445555 44455555443
No 29
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=98.61 E-value=1.1e-08 Score=110.10 Aligned_cols=58 Identities=21% Similarity=0.299 Sum_probs=47.7
Q ss_pred hhHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecchh
Q 001888 655 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFR 713 (1000)
Q Consensus 655 ~qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~ 713 (1000)
..|+..++.+ +..| ..+++|||+.||++|++.|++||+|+++... ++..||++..+..
T Consensus 199 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~-~k~~A~~v~~~~~ 260 (274)
T 3fzq_A 199 FHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQ-LKDIATSICEDIF 260 (274)
T ss_dssp CSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCHH-HHHHCSEEECCGG
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccHH-HHHhhhheeCCCc
Confidence 3588888887 5544 5699999999999999999999999766544 8999999998643
No 30
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=98.61 E-value=8.4e-09 Score=111.95 Aligned_cols=52 Identities=27% Similarity=0.237 Sum_probs=44.3
Q ss_pred hhHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcE
Q 001888 655 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDY 707 (1000)
Q Consensus 655 ~qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~ 707 (1000)
..|+..++.+ +..| ..|+||||+.||++|++.|++||+|+++... +|+.||+
T Consensus 208 ~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~-vk~~A~~ 263 (285)
T 3pgv_A 208 VSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQR-LKDLHPE 263 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHHHCTT
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHH-HHHhCCC
Confidence 4599988888 6665 5699999999999999999999999776554 8999985
No 31
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=98.58 E-value=5.7e-08 Score=103.04 Aligned_cols=57 Identities=18% Similarity=0.151 Sum_probs=46.2
Q ss_pred hhHHHHHHHH-hc----CCCEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecc
Q 001888 655 KQKALVTRLV-KG----TGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 655 ~qK~~iV~~l-~~----~~~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
..|+..++.+ +. ....|+|||||.||++|++.|++||+|++......+..||+++.+
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEecc
Confidence 4599988888 44 336799999999999999999999999776533367788988765
No 32
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=98.57 E-value=1e-07 Score=100.39 Aligned_cols=54 Identities=15% Similarity=0.214 Sum_probs=45.8
Q ss_pred cCChh--hHHHHHHHH-hcCCCEEEEEcCCccChHHhhhc--CccccccCccccchhccCcEEecc
Q 001888 651 RSSPK--QKALVTRLV-KGTGKTTLAIGDGANDVGMLQEA--DIGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 651 r~sp~--qK~~iV~~l-~~~~~~vlaiGDG~ND~~mlk~A--dvGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
.+.|. .|+..++.+ +..| |+++|||.||++||+.| ++||+|+++ +..||+++.+
T Consensus 153 ei~~~~~~Kg~al~~l~~~~g--via~GD~~ND~~Ml~~a~~g~~vam~Na-----~~~A~~v~~~ 211 (239)
T 1u02_A 153 ELRVPGVNKGSAIRSVRGERP--AIIAGDDATDEAAFEANDDALTIKVGEG-----ETHAKFHVAD 211 (239)
T ss_dssp EEECTTCCHHHHHHHHHTTSC--EEEEESSHHHHHHHHTTTTSEEEEESSS-----CCCCSEEESS
T ss_pred EEEcCCCCHHHHHHHHHhhCC--eEEEeCCCccHHHHHHhhCCcEEEECCC-----CCcceEEeCC
Confidence 34444 699999999 7777 99999999999999999 999999764 5679998866
No 33
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=98.55 E-value=2.3e-08 Score=108.26 Aligned_cols=60 Identities=22% Similarity=0.341 Sum_probs=47.6
Q ss_pred cCChh--hHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecc
Q 001888 651 RSSPK--QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 651 r~sp~--qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
...|. .|...++.+ +..| ..++++||+.||++|++.|++||+|++... ..+..||+++.+
T Consensus 191 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~-~~~~~a~~v~~~ 256 (282)
T 1rkq_A 191 EILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIP-SVKEVANFVTKS 256 (282)
T ss_dssp EEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHCSEECCC
T ss_pred EecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCcH-HHHhhCCEEecC
Confidence 34444 699888888 5443 469999999999999999999999966543 377789999876
No 34
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=98.52 E-value=1.2e-07 Score=93.49 Aligned_cols=108 Identities=19% Similarity=0.075 Sum_probs=79.2
Q ss_pred HHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhhhhhh
Q 001888 527 CIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQV 606 (1000)
Q Consensus 527 ~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 606 (1000)
+++.|+++|+++.++||+....+..+++.+|+...
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~--------------------------------------------- 73 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYL--------------------------------------------- 73 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEE---------------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEe---------------------------------------------
Confidence 89999999999999999999999999999988421
Q ss_pred cccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hc---CCCEEEEEcCCccChH
Q 001888 607 NSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KG---TGKTTLAIGDGANDVG 682 (1000)
Q Consensus 607 ~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~---~~~~vlaiGDG~ND~~ 682 (1000)
+... ..|...++.+ +. ....+++|||+.||++
T Consensus 74 ------------------------------------------~~~~--kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~ 109 (164)
T 3e8m_A 74 ------------------------------------------FQGV--VDKLSAAEELCNELGINLEQVAYIGDDLNDAK 109 (164)
T ss_dssp ------------------------------------------ECSC--SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHH
T ss_pred ------------------------------------------eccc--CChHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 0001 1233333333 22 2357999999999999
Q ss_pred HhhhcCccccccCccccchhccCcEEecc------hhhhHHHHHHhhhh
Q 001888 683 MLQEADIGVGISGVEGMQAVMSSDYAIAQ------FRFLERLLLVHGHW 725 (1000)
Q Consensus 683 mlk~AdvGIa~~g~e~~~ak~~aD~vl~~------f~~l~~lll~~gR~ 725 (1000)
|.+.||+++++.+... .++..||+++.+ +..+.+.++ +|++
T Consensus 110 ~~~~ag~~~~~~~~~~-~~~~~ad~v~~~~~~~g~~~e~~~~ll-~~~~ 156 (164)
T 3e8m_A 110 LLKRVGIAGVPASAPF-YIRRLSTIFLEKRGGEGVFREFVEKVL-GINL 156 (164)
T ss_dssp HHTTSSEEECCTTSCH-HHHTTCSSCCCCCTTTTHHHHHHHHHT-TCCH
T ss_pred HHHHCCCeEEcCChHH-HHHHhCcEEeccCCCCcHHHHHHHHHH-ccCc
Confidence 9999999998854433 378899999987 445555545 5543
No 35
>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=98.51 E-value=1.1e-07 Score=102.06 Aligned_cols=57 Identities=28% Similarity=0.376 Sum_probs=48.3
Q ss_pred hhHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecch
Q 001888 655 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQF 712 (1000)
Q Consensus 655 ~qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f 712 (1000)
..|+..++.+ +..| ..|+||||+.||++|++.|++||+|+++... ++..||++..+.
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~-~k~~Ad~v~~~~ 253 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEK-VQSVADFVTDTV 253 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHHTCSEECCCT
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHH-HHHhcCEeeCCC
Confidence 4699888888 6655 4699999999999999999999999766544 899999998763
No 36
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=98.50 E-value=1.1e-07 Score=96.59 Aligned_cols=117 Identities=18% Similarity=0.221 Sum_probs=88.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.+.++.|++.|++++++||.....+..+ +.+|+..- ...+.....
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~~~~~~~~--------------------------- 129 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-ANRAIFEDG--------------------------- 129 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EEEEEEETT---------------------------
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-eeeEEeeCC---------------------------
Confidence 7889999999999999999999999988887777 77776321 111110000
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
. .......|..|...++.+ ....+++|||+.
T Consensus 130 --------------------~---------------------------~~~~~~~~~~k~~~l~~l--~~~~~i~iGD~~ 160 (201)
T 4ap9_A 130 --------------------K---------------------------FQGIRLRFRDKGEFLKRF--RDGFILAMGDGY 160 (201)
T ss_dssp --------------------E---------------------------EEEEECCSSCHHHHHGGG--TTSCEEEEECTT
T ss_pred --------------------c---------------------------eECCcCCccCHHHHHHhc--CcCcEEEEeCCH
Confidence 0 011344567788888877 456799999999
Q ss_pred cChHHhhhcCccccccCccccchhccCcEEecchhhhHHH
Q 001888 679 NDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 679 ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~~l~~l 718 (1000)
||++|++.||+||+|.+... .||+++.++..+..+
T Consensus 161 ~Di~~~~~ag~~v~~~~~~~-----~ad~v~~~~~el~~~ 195 (201)
T 4ap9_A 161 ADAKMFERADMGIAVGREIP-----GADLLVKDLKELVDF 195 (201)
T ss_dssp CCHHHHHHCSEEEEESSCCT-----TCSEEESSHHHHHHH
T ss_pred HHHHHHHhCCceEEECCCCc-----cccEEEccHHHHHHH
Confidence 99999999999999965543 899999998887766
No 37
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=98.47 E-value=5.3e-07 Score=86.94 Aligned_cols=107 Identities=19% Similarity=0.350 Sum_probs=77.4
Q ss_pred eCChhHHHHHHHHHHc-CcEEEeecCCeeEEEecCCCCCccccEEEEEEEeeCCCCCCceEEEEEEcCCCcEEEEEccch
Q 001888 352 AESPDEAAFVIAAREV-GFQFFGSSQTSISLHELDPVSGQKVNRVYELLHVLEFTSSRKRMSVMVRNPENQLLLLCKGAD 430 (1000)
Q Consensus 352 ~~sp~e~al~~~a~~~-g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~ 430 (1000)
++||...|++++|++. |+.+.. ... ......+|++..++.+|.+ +| .-+.+|++
T Consensus 49 SeHPla~AIv~~A~~~~~l~~~~-------------------~~~-~~~~~~~F~a~~G~~Gv~v---~G--~~v~vGn~ 103 (156)
T 1svj_A 49 DETPEGRSIVILAKQRFNLRERD-------------------VQS-LHATFVPFTAQSRMSGINI---DN--RMIRKGSV 103 (156)
T ss_dssp CCSHHHHHHHHHHHHHTTCCCCC-------------------HHH-HTCEEEEEETTTTEEEEEE---TT--EEEEEEEH
T ss_pred CCCHHHHHHHHHHHHhcCCCccc-------------------ccc-cccceeeccccCCCCeEEE---CC--EEEEEeCc
Confidence 5799999999999986 654211 000 0012357888888777754 44 35678999
Q ss_pred hHhHHHHhccChhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhcccee
Q 001888 431 SVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLIL 510 (1000)
Q Consensus 431 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~ 510 (1000)
+.|..++...+-.....+.+.++.++.+|.+++++| .|..+
T Consensus 104 ~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA---------------------------------------~d~~l 144 (156)
T 1svj_A 104 DAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVV---------------------------------------EGSRV 144 (156)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEE---------------------------------------ETTEE
T ss_pred HHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEE---------------------------------------ECCEE
Confidence 888777654332333457778889999999999999 36789
Q ss_pred eEEeeecccccC
Q 001888 511 LGATAVEDKLQK 522 (1000)
Q Consensus 511 lG~i~i~D~lr~ 522 (1000)
+|++++.|++||
T Consensus 145 ~GvIalaD~iK~ 156 (156)
T 1svj_A 145 LGVIALKDIVKG 156 (156)
T ss_dssp EEEEEEEECCCC
T ss_pred EEEEEEecCCCC
Confidence 999999999996
No 38
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=98.45 E-value=3e-07 Score=94.10 Aligned_cols=125 Identities=22% Similarity=0.275 Sum_probs=84.2
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.++++.+++.|+++.++||+....+..+...+|+...-.........
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------- 128 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDG--------------------------- 128 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT---------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEECC---------------------------
Confidence 56789999999999999999999999988888777777762110000000000
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEc-CChhhHHHHHHHH-hcCC---CEEEE
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCR-SSPKQKALVTRLV-KGTG---KTTLA 673 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r-~sp~qK~~iV~~l-~~~~---~~vla 673 (1000)
.++|. +... +.+..|...+..+ +..| ..+++
T Consensus 129 --------------------~~~~~------------------------~~~~~~~~~~K~~~l~~~~~~lgi~~~~~~~ 164 (211)
T 1l7m_A 129 --------------------KLTGD------------------------VEGEVLKENAKGEILEKIAKIEGINLEDTVA 164 (211)
T ss_dssp --------------------EEEEE------------------------EECSSCSTTHHHHHHHHHHHHHTCCGGGEEE
T ss_pred --------------------EEcCC------------------------cccCccCCccHHHHHHHHHHHcCCCHHHEEE
Confidence 00000 0001 1234666666555 5444 46999
Q ss_pred EcCCccChHHhhhcCccccccCccccchhccCcEEecc--hhhhH
Q 001888 674 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLE 716 (1000)
Q Consensus 674 iGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~--f~~l~ 716 (1000)
+||+.||++|++.||++++|.+.+. .+..||+++.+ +..+.
T Consensus 165 iGD~~~Di~~~~~ag~~~~~~~~~~--~~~~a~~v~~~~~~~~l~ 207 (211)
T 1l7m_A 165 VGDGANDISMFKKAGLKIAFCAKPI--LKEKADICIEKRDLREIL 207 (211)
T ss_dssp EECSGGGHHHHHHCSEEEEESCCHH--HHTTCSEEECSSCGGGGG
T ss_pred EecChhHHHHHHHCCCEEEECCCHH--HHhhcceeecchhHHHHH
Confidence 9999999999999999999864332 67789999977 66554
No 39
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=98.44 E-value=3.5e-08 Score=107.80 Aligned_cols=55 Identities=18% Similarity=0.287 Sum_probs=46.3
Q ss_pred hHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEec-c
Q 001888 656 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIA-Q 711 (1000)
Q Consensus 656 qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~-~ 711 (1000)
.|+..++.+ +..| ..|++|||+.||++|++.|++||+|++... .++..||+++. +
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~~k~~a~~v~~~~ 283 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATD-SAKSHAKCVLPVS 283 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCH-HHHHHSSEECSSC
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcH-HHHhhCCEEEccC
Confidence 699988888 5554 469999999999999999999999976543 37788999987 5
No 40
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=98.39 E-value=2.2e-07 Score=99.93 Aligned_cols=57 Identities=25% Similarity=0.249 Sum_probs=46.9
Q ss_pred hhHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecch
Q 001888 655 KQKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQF 712 (1000)
Q Consensus 655 ~qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f 712 (1000)
..|...++.+ +..| ..++++||+.||++|++.|++||+|++... .++..||+++.+.
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~~k~~a~~v~~~~ 250 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAE-NIKQIARYATDDN 250 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCH-HHHHHCSEECCCG
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccH-HHHHhCCeeCcCC
Confidence 4798888888 5544 469999999999999999999999966543 3788999998763
No 41
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=98.36 E-value=7.9e-07 Score=91.34 Aligned_cols=130 Identities=17% Similarity=0.224 Sum_probs=87.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceE--EEEecCCchhhHhhhhccHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQ--IVITLDSPDMEALEKQGDKENITKVSLESVT 596 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (1000)
.+.+++.+.++.|++.|+++.++||.....+..+.+.+|+....... +.......
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------- 138 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGS----------------------- 138 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSB-----------------------
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCc-----------------------
Confidence 37899999999999999999999999999999999998884321100 00000000
Q ss_pred HHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hcCCCEEEEEc
Q 001888 597 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTGKTTLAIG 675 (1000)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~~~~~vlaiG 675 (1000)
+ ..+.....+|..+...+... .-....+++||
T Consensus 139 ----------------------------~-------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vG 171 (219)
T 3kd3_A 139 ----------------------------F-------------------KELDNSNGACDSKLSAFDKAKGLIDGEVIAIG 171 (219)
T ss_dssp ----------------------------E-------------------EEEECTTSTTTCHHHHHHHHGGGCCSEEEEEE
T ss_pred ----------------------------e-------------------eccCCCCCCcccHHHHHHHHhCCCCCCEEEEE
Confidence 0 00111233455666555544 44567899999
Q ss_pred CCccChHHhhh----cCccccccCccccchhccCcEEecchhhhHHHH
Q 001888 676 DGANDVGMLQE----ADIGVGISGVEGMQAVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 676 DG~ND~~mlk~----AdvGIa~~g~e~~~ak~~aD~vl~~f~~l~~ll 719 (1000)
|+.||++|++. +.+|+++.+.. ...+..||+++.++..+..+|
T Consensus 172 D~~~Di~~~~~G~~~~~v~~~~~~~~-~~~~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 172 DGYTDYQLYEKGYATKFIAYMEHIER-EKVINLSKYVARNVAELASLI 218 (219)
T ss_dssp SSHHHHHHHHHTSCSEEEEECSSCCC-HHHHHHCSEEESSHHHHHHHH
T ss_pred CCHhHHHHHhCCCCcEEEeccCcccc-HHHHhhcceeeCCHHHHHHhh
Confidence 99999999965 34445554332 236778999999988887764
No 42
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=98.35 E-value=6.2e-07 Score=90.53 Aligned_cols=97 Identities=13% Similarity=0.135 Sum_probs=71.9
Q ss_pred HHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHHHhhhhh
Q 001888 526 ECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQIREGISQ 605 (1000)
Q Consensus 526 e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 (1000)
.+|+.|+++|++++++||+....+..+++.+|+...
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~-------------------------------------------- 95 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITHL-------------------------------------------- 95 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEE--------------------------------------------
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCcee--------------------------------------------
Confidence 389999999999999999999999999998887320
Q ss_pred hcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hcCC---CEEEEEcCCccCh
Q 001888 606 VNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAIGDGANDV 681 (1000)
Q Consensus 606 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~~~---~~vlaiGDG~ND~ 681 (1000)
+.. ...|...++.+ +..| ..+++|||+.||+
T Consensus 96 -------------------------------------------~~~--~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di 130 (188)
T 2r8e_A 96 -------------------------------------------YQG--QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDW 130 (188)
T ss_dssp -------------------------------------------ECS--CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGH
T ss_pred -------------------------------------------ecC--CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence 000 11233333333 3323 5699999999999
Q ss_pred HHhhhcCccccccCccccchhccCcEEecch
Q 001888 682 GMLQEADIGVGISGVEGMQAVMSSDYAIAQF 712 (1000)
Q Consensus 682 ~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f 712 (1000)
+|.+.||+++++.+.. ..++..||+++.+.
T Consensus 131 ~~a~~ag~~~~~~~~~-~~~~~~ad~v~~~~ 160 (188)
T 2r8e_A 131 PVMEKVGLSVAVADAH-PLLIPRADYVTRIA 160 (188)
T ss_dssp HHHTTSSEEEECTTSC-TTTGGGSSEECSSC
T ss_pred HHHHHCCCEEEecCcC-HHHHhcCCEEEeCC
Confidence 9999999999885433 23677899999875
No 43
>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24
Probab=98.34 E-value=3.6e-07 Score=101.30 Aligned_cols=75 Identities=16% Similarity=0.240 Sum_probs=56.6
Q ss_pred hhhHHHHHHHHhcC--CCEEEEEcCCccChHHhhhc----CccccccCccccchhccCcEEecc--h----hhhHHHHHH
Q 001888 654 PKQKALVTRLVKGT--GKTTLAIGDGANDVGMLQEA----DIGVGISGVEGMQAVMSSDYAIAQ--F----RFLERLLLV 721 (1000)
Q Consensus 654 p~qK~~iV~~l~~~--~~~vlaiGDG~ND~~mlk~A----dvGIa~~g~e~~~ak~~aD~vl~~--f----~~l~~lll~ 721 (1000)
+.+|+..++.+... .+.|+++|||.||++|++.| |+||+| ++.. .++..||+++.+ . ..+.++ +.
T Consensus 205 g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~~-~lk~~Ad~v~~~~~~dGV~~~l~~~-~~ 281 (332)
T 1y8a_A 205 AGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGNE-YALKHADVVIISPTAMSEAKVIELF-ME 281 (332)
T ss_dssp HHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCCH-HHHTTCSEEEECSSTHHHHHHHHHH-HH
T ss_pred CCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCCH-HHHhhCcEEecCCCCCHHHHHHHHH-HH
Confidence 56799888876322 25599999999999999999 999999 6543 388999999876 2 224444 77
Q ss_pred hhhhhhhhhhh
Q 001888 722 HGHWCYRRISM 732 (1000)
Q Consensus 722 ~gR~~~~~i~~ 732 (1000)
.||..+ ++-+
T Consensus 282 ~~~~~~-~~~~ 291 (332)
T 1y8a_A 282 RKERAF-EVLS 291 (332)
T ss_dssp HGGGGG-GGGG
T ss_pred cCCchh-HHHH
Confidence 888877 5444
No 44
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=98.32 E-value=5.1e-07 Score=93.03 Aligned_cols=128 Identities=20% Similarity=0.256 Sum_probs=87.5
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHH
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 597 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (1000)
-++.|++.++++.|++.|++++++|+.....+..+...+|+...-...+.....
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~-------------------------- 127 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVEND-------------------------- 127 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT--------------------------
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCC--------------------------
Confidence 468899999999999999999999999999999999888874321111111100
Q ss_pred HHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcC-ChhhHHHHHHHH-hcCC---CEEE
Q 001888 598 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRS-SPKQKALVTRLV-KGTG---KTTL 672 (1000)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~-sp~qK~~iV~~l-~~~~---~~vl 672 (1000)
.++| .+.... ....|..+++.+ +..| ..++
T Consensus 128 ---------------------~~~~------------------------~~~~~~~~~k~k~~~~~~~~~~~g~~~~~~i 162 (217)
T 3m1y_A 128 ---------------------ALNG------------------------LVTGHMMFSHSKGEMLLVLQRLLNISKTNTL 162 (217)
T ss_dssp ---------------------EEEE------------------------EEEESCCSTTHHHHHHHHHHHHHTCCSTTEE
T ss_pred ---------------------EEEe------------------------eeccCCCCCCChHHHHHHHHHHcCCCHhHEE
Confidence 0000 011111 133455555555 4333 5699
Q ss_pred EEcCCccChHHhhhcCccccccCccccchhccCcEEecc--hhhhHHH
Q 001888 673 AIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERL 718 (1000)
Q Consensus 673 aiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~--f~~l~~l 718 (1000)
+|||+.||++|.+.||+++++.+.+. .+..||+++.+ +..+..+
T Consensus 163 ~vGDs~~Di~~a~~aG~~~~~~~~~~--l~~~ad~v~~~~dl~~~~~~ 208 (217)
T 3m1y_A 163 VVGDGANDLSMFKHAHIKIAFNAKEV--LKQHATHCINEPDLALIKPL 208 (217)
T ss_dssp EEECSGGGHHHHTTCSEEEEESCCHH--HHTTCSEEECSSBGGGGTTC
T ss_pred EEeCCHHHHHHHHHCCCeEEECccHH--HHHhcceeecccCHHHHHHH
Confidence 99999999999999999999944333 78899999975 4445444
No 45
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=98.31 E-value=1e-07 Score=102.34 Aligned_cols=55 Identities=22% Similarity=0.323 Sum_probs=45.2
Q ss_pred hHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecc
Q 001888 656 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 656 qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
.|...++.+ +..| ..++++||+.||++|++.|++||+|++... ..+..||+++.+
T Consensus 190 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~-~~~~~a~~v~~~ 248 (268)
T 1nf2_A 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIE-KVKEASDIVTLT 248 (268)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCH-HHHHHCSEECCC
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCH-HHHhhCCEEEcc
Confidence 698888887 5443 569999999999999999999999975543 367789999876
No 46
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=98.30 E-value=1.3e-06 Score=89.18 Aligned_cols=129 Identities=19% Similarity=0.122 Sum_probs=88.1
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccC--ceEEEEecCCchhhHhhhhccHHHHHHHHHHHH
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQE--MKQIVITLDSPDMEALEKQGDKENITKVSLESV 595 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (1000)
-++.+++.+.++.|++.|++++++|+.....+..+...+|+...- ..
T Consensus 69 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~------------------------------- 117 (205)
T 3m9l_A 69 SRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEAD------------------------------- 117 (205)
T ss_dssp EEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGG-------------------------------
T ss_pred CCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcce-------------------------------
Confidence 357899999999999999999999999998888888888874211 00
Q ss_pred HHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEc
Q 001888 596 TKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIG 675 (1000)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiG 675 (1000)
++++.. ......|+--..+.+.+.-....+++||
T Consensus 118 -----------------------i~~~~~-----------------------~~~kp~~~~~~~~~~~~g~~~~~~i~iG 151 (205)
T 3m9l_A 118 -----------------------VLGRDE-----------------------APPKPHPGGLLKLAEAWDVSPSRMVMVG 151 (205)
T ss_dssp -----------------------EECTTT-----------------------SCCTTSSHHHHHHHHHTTCCGGGEEEEE
T ss_pred -----------------------EEeCCC-----------------------CCCCCCHHHHHHHHHHcCCCHHHEEEEC
Confidence 000000 0000111112223333322235699999
Q ss_pred CCccChHHhhhcCc-cccccCccccchhccCcEEecchhhhHHHHHHhhh
Q 001888 676 DGANDVGMLQEADI-GVGISGVEGMQAVMSSDYAIAQFRFLERLLLVHGH 724 (1000)
Q Consensus 676 DG~ND~~mlk~Adv-GIa~~g~e~~~ak~~aD~vl~~f~~l~~lll~~gR 724 (1000)
|+.||+.|.+.||+ +|+|.+.... .+..||+++.++..+..++=.+++
T Consensus 152 D~~~Di~~a~~aG~~~i~v~~~~~~-~~~~ad~v~~~~~el~~~~~~~~~ 200 (205)
T 3m9l_A 152 DYRFDLDCGRAAGTRTVLVNLPDNP-WPELTDWHARDCAQLRDLLSAEGH 200 (205)
T ss_dssp SSHHHHHHHHHHTCEEEECSSSSCS-CGGGCSEECSSHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCCEEEEEeCCCCc-ccccCCEEeCCHHHHHHHHHhccc
Confidence 99999999999999 8998654432 677899999999988887433333
No 47
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=98.28 E-value=8.9e-07 Score=92.55 Aligned_cols=129 Identities=22% Similarity=0.236 Sum_probs=87.5
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHH
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 597 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (1000)
.++.+++.+.++.|++.|++++++|+.....+..+...+|+...-..
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 149 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTV--------------------------------- 149 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSE---------------------------------
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheee---------------------------------
Confidence 35789999999999999999999999999888888888886432111
Q ss_pred HHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCC
Q 001888 598 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG 677 (1000)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG 677 (1000)
++.+... -.....|+--..+.+.+.-....|++|||+
T Consensus 150 ---------------------~~~~~~~----------------------~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~ 186 (237)
T 4ex6_A 150 ---------------------IAGDDSV----------------------ERGKPHPDMALHVARGLGIPPERCVVIGDG 186 (237)
T ss_dssp ---------------------EECTTTS----------------------SSCTTSSHHHHHHHHHHTCCGGGEEEEESS
T ss_pred ---------------------EEeCCCC----------------------CCCCCCHHHHHHHHHHcCCCHHHeEEEcCC
Confidence 1111000 000111222233344443334679999999
Q ss_pred ccChHHhhhcCc---cccccCccccchhc-cCcEEecchhhhHHHHHHhh
Q 001888 678 ANDVGMLQEADI---GVGISGVEGMQAVM-SSDYAIAQFRFLERLLLVHG 723 (1000)
Q Consensus 678 ~ND~~mlk~Adv---GIa~~g~e~~~ak~-~aD~vl~~f~~l~~lll~~g 723 (1000)
.||+.|.+.||+ +|++++......+. .||+++.++..+..+ +..|
T Consensus 187 ~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~-l~~~ 235 (237)
T 4ex6_A 187 VPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTA-VLDG 235 (237)
T ss_dssp HHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHHH-HHHC
T ss_pred HHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHHH-HHcc
Confidence 999999999999 88875443222343 799999999988877 4444
No 48
>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*
Probab=98.28 E-value=1.9e-06 Score=91.81 Aligned_cols=53 Identities=15% Similarity=0.194 Sum_probs=44.7
Q ss_pred hhHHHHHHHH-hcCC-----CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecc
Q 001888 655 KQKALVTRLV-KGTG-----KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 655 ~qK~~iV~~l-~~~~-----~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
..|...++.+ +..| ..++++||+.||++|++.|++||+|+++.. . .++++..+
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~--~--~~~~~~~~ 233 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP--P--EGVLATPA 233 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC--C--TTCEECSS
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh--c--CCcEEeCC
Confidence 5789988888 6655 679999999999999999999999977665 3 67888765
No 49
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=98.27 E-value=1.7e-06 Score=90.46 Aligned_cols=180 Identities=11% Similarity=0.164 Sum_probs=93.4
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccc----cCceEEEEecCCchhhHhhhhccHHHHHHHHHH
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR----QEMKQIVITLDSPDMEALEKQGDKENITKVSLE 593 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (1000)
..+.+.+.+++++++++|++++++||+....+..+...+|+.. .++..+..+++......+ ....+.++....+
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l--~~~~~i~~~~~~~ 96 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASM--DEEWILWNEIRKR 96 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCC--SHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccH--HHHHHHHHHHHHh
Confidence 3577888999999999999999999999999999998888632 111111111100000001 0011111111000
Q ss_pred HHHHHHHhhhhhhcccccCccceEEEEe-ccchHHHhhHHHHHHHHHHHhhcCceE----EEcCCh--hhHHHHHHHH-h
Q 001888 594 SVTKQIREGISQVNSAKESKVTFGLVID-GKSLDFALDKKLEKMFLDLAIDCASVI----CCRSSP--KQKALVTRLV-K 665 (1000)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~-g~~l~~~~~~~~~~~~~~~~~~~~~vi----~~r~sp--~qK~~iV~~l-~ 665 (1000)
............ ..... .+.+ +..-. .....+........ ++ +....| ..|...++.+ +
T Consensus 97 -----~~~~~~~~~~~~-~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~~~ei~~~~~~K~~~~~~~~~ 163 (231)
T 1wr8_A 97 -----FPNARTSYTMPD-RRAGL-VIMRETINVE-----TVREIINELNLNLV-AVDSGFAIHVKKPWINKGSGIEKASE 163 (231)
T ss_dssp -----CTTCCBCTTGGG-CSSCE-EECTTTSCHH-----HHHHHHHHTTCSCE-EEECSSCEEEECTTCCHHHHHHHHHH
T ss_pred -----CCCceEEecCCC-ceeeE-EEECCCCCHH-----HHHHHHHhcCCcEE-EEecCcEEEEecCCCChHHHHHHHHH
Confidence 000000000000 00011 1122 11111 11111111111111 11 112223 3688888877 5
Q ss_pred cCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecchh
Q 001888 666 GTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFR 713 (1000)
Q Consensus 666 ~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~ 713 (1000)
..| ..++++||+.||++|++.|++||+|.+... ..+..||+++.+..
T Consensus 164 ~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~~~~~-~~~~~a~~v~~~~~ 213 (231)
T 1wr8_A 164 FLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPK-ILKENADYVTKKEY 213 (231)
T ss_dssp HHTSCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHTTCSEECSSCH
T ss_pred HcCCCHHHEEEECCCHHHHHHHHHcCCeEEecCCCH-HHHhhCCEEecCCC
Confidence 433 569999999999999999999999965543 36778999987643
No 50
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.24 E-value=1.9e-06 Score=98.69 Aligned_cols=135 Identities=21% Similarity=0.234 Sum_probs=92.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.|++.+.++.|++.|+++.++||.....+..+++.+|+-..-...+.+...
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg--------------------------- 308 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDG--------------------------- 308 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETT---------------------------
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCC---------------------------
Confidence 78999999999999999999999999999999999999984211111111000
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hcCC---CEEEEE
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAI 674 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~~~---~~vlai 674 (1000)
.++|.... .-..++-|..+++.+ +..| ..+++|
T Consensus 309 --------------------~~tg~~~~-----------------------~v~~~kpk~~~~~~~~~~~gi~~~~~i~v 345 (415)
T 3p96_A 309 --------------------TLTGRVVG-----------------------PIIDRAGKATALREFAQRAGVPMAQTVAV 345 (415)
T ss_dssp --------------------EEEEEECS-----------------------SCCCHHHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred --------------------EEEeeEcc-----------------------CCCCCcchHHHHHHHHHHcCcChhhEEEE
Confidence 11111000 011245566666665 4444 569999
Q ss_pred cCCccChHHhhhcCccccccCccccchhccCcEEecc--hhhhHHHHHHhhhhh
Q 001888 675 GDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQ--FRFLERLLLVHGHWC 726 (1000)
Q Consensus 675 GDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~--f~~l~~lll~~gR~~ 726 (1000)
|||.||++|++.||+|+++.+.+. .+..||+++.. +..+..+ +-.+|.-
T Consensus 346 GD~~~Di~~a~~aG~~va~~~~~~--~~~~ad~~i~~~~l~~ll~~-l~~~~~~ 396 (415)
T 3p96_A 346 GDGANDIDMLAAAGLGIAFNAKPA--LREVADASLSHPYLDTVLFL-LGVTRGE 396 (415)
T ss_dssp ECSGGGHHHHHHSSEEEEESCCHH--HHHHCSEEECSSCTTHHHHH-TTCCHHH
T ss_pred ECCHHHHHHHHHCCCeEEECCCHH--HHHhCCEEEccCCHHHHHHH-hCCCHHH
Confidence 999999999999999999954443 78889999874 4445555 3444433
No 51
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=98.22 E-value=7.9e-07 Score=94.90 Aligned_cols=62 Identities=27% Similarity=0.469 Sum_probs=49.5
Q ss_pred hHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecchhh--hHHH
Q 001888 656 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRF--LERL 718 (1000)
Q Consensus 656 qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~~--l~~l 718 (1000)
.|...++.+ +..| ..+++|||+.||++|++.|++||+|.+... ..+..||+++.+... +.++
T Consensus 187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~-~~~~~a~~v~~~~~~dGv~~~ 254 (261)
T 2rbk_A 187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKE-DVKAAADYVTAPIDEDGISKA 254 (261)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHSSEECCCGGGTHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccH-HHHhhCCEEeccCchhhHHHH
Confidence 688877777 5444 569999999999999999999999965543 367889999987665 6555
No 52
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=98.20 E-value=3.5e-06 Score=86.90 Aligned_cols=123 Identities=12% Similarity=0.077 Sum_probs=81.0
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.+.++.+++.|++++++|+.....+..+....|+...-..++
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~-------------------------------- 141 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALA-------------------------------- 141 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEE--------------------------------
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEE--------------------------------
Confidence 457899999999999999999999998887777777777632111110
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
.+... -.....|.--..+.+.+.-....+++|||+.
T Consensus 142 ----------------------~~~~~----------------------~~~kp~~~~~~~~~~~~~i~~~~~i~iGD~~ 177 (226)
T 1te2_A 142 ----------------------SAEKL----------------------PYSKPHPQVYLDCAAKLGVDPLTCVALEDSV 177 (226)
T ss_dssp ----------------------ECTTS----------------------SCCTTSTHHHHHHHHHHTSCGGGEEEEESSH
T ss_pred ----------------------ecccc----------------------CCCCCChHHHHHHHHHcCCCHHHeEEEeCCH
Confidence 00000 0000112222233333333335699999999
Q ss_pred cChHHhhhcCccccc----cCccccchhccCcEEecchhhhHHH
Q 001888 679 NDVGMLQEADIGVGI----SGVEGMQAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 679 ND~~mlk~AdvGIa~----~g~e~~~ak~~aD~vl~~f~~l~~l 718 (1000)
||++|++.||+++++ .+... ..+..||+++.++..+...
T Consensus 178 nDi~~a~~aG~~~~~~~~~~~~~~-~~~~~a~~v~~~~~el~~~ 220 (226)
T 1te2_A 178 NGMIASKAARMRSIVVPAPEAQND-PRFVLANVKLSSLTELTAK 220 (226)
T ss_dssp HHHHHHHHTTCEEEECCCTTTTTC-GGGGGSSEECSCGGGCCHH
T ss_pred HHHHHHHHcCCEEEEEcCCCCccc-ccccccCeEECCHHHHhHH
Confidence 999999999999877 22221 2577899999998876655
No 53
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=98.19 E-value=1.8e-06 Score=94.70 Aligned_cols=127 Identities=20% Similarity=0.198 Sum_probs=85.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.|++.++++.|+++|+++.++||.....+..+.+.+|+..--...+.....
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg--------------------------- 231 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDN--------------------------- 231 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETT---------------------------
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCC---------------------------
Confidence 48999999999999999999999999999999999999984311111111110
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEc-CChhhHHHHHHHH-hcCC---CEEEE
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCR-SSPKQKALVTRLV-KGTG---KTTLA 673 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r-~sp~qK~~iV~~l-~~~~---~~vla 673 (1000)
.++|. +... ..++-|..+++.+ +..| ..+++
T Consensus 232 --------------------~~tg~------------------------i~~~~~~~kpkp~~~~~~~~~lgv~~~~~i~ 267 (317)
T 4eze_A 232 --------------------VLTDN------------------------ITLPIMNAANKKQTLVDLAARLNIATENIIA 267 (317)
T ss_dssp --------------------EEEEE------------------------ECSSCCCHHHHHHHHHHHHHHHTCCGGGEEE
T ss_pred --------------------eeeee------------------------EecccCCCCCCHHHHHHHHHHcCCCcceEEE
Confidence 00000 0000 1234455555544 3333 56999
Q ss_pred EcCCccChHHhhhcCccccccCccccchhccCcEEec--chhhhHHH
Q 001888 674 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIA--QFRFLERL 718 (1000)
Q Consensus 674 iGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~--~f~~l~~l 718 (1000)
|||+.||++|.+.||+|+++.+.+. .+..||.++. ++..+..+
T Consensus 268 VGDs~~Di~aa~~AG~~va~~~~~~--~~~~a~~~i~~~~L~~ll~~ 312 (317)
T 4eze_A 268 CGDGANDLPMLEHAGTGIAWKAKPV--VREKIHHQINYHGFELLLFL 312 (317)
T ss_dssp EECSGGGHHHHHHSSEEEEESCCHH--HHHHCCEEESSSCGGGGGGG
T ss_pred EeCCHHHHHHHHHCCCeEEeCCCHH--HHHhcCeeeCCCCHHHHHHH
Confidence 9999999999999999999954433 6778888875 34444433
No 54
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=98.19 E-value=2.3e-06 Score=92.67 Aligned_cols=57 Identities=25% Similarity=0.282 Sum_probs=46.4
Q ss_pred hHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecchh
Q 001888 656 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFR 713 (1000)
Q Consensus 656 qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~ 713 (1000)
.|+..++.+ +..| ..++++||+.||++|++.|++||+|.+... ..+..||+++.+..
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~-~~~~~a~~v~~~~~ 276 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNARE-DIKSIADAVTLTND 276 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCH-HHHHHCSEECCCGG
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCCH-HHHhhCceeecCCC
Confidence 688888887 5554 469999999999999999999999965543 37788999987633
No 55
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=98.18 E-value=4.1e-06 Score=86.62 Aligned_cols=120 Identities=17% Similarity=0.129 Sum_probs=85.1
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHH
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 597 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (1000)
-++.+++.+.++.|++.|+++.++|+.....+..+...+|+...-..+
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~-------------------------------- 132 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAI-------------------------------- 132 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEE--------------------------------
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeee--------------------------------
Confidence 357899999999999999999999999988888888888874321111
Q ss_pred HHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCC--hhhHHHHHHHH-hc---CCCEE
Q 001888 598 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSS--PKQKALVTRLV-KG---TGKTT 671 (1000)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~s--p~qK~~iV~~l-~~---~~~~v 671 (1000)
+.+... ..-|..+++.+ +. ....+
T Consensus 133 --------------------------------------------------~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 162 (226)
T 3mc1_A 133 --------------------------------------------------VGSSLDGKLSTKEDVIRYAMESLNIKSDDA 162 (226)
T ss_dssp --------------------------------------------------EEECTTSSSCSHHHHHHHHHHHHTCCGGGE
T ss_pred --------------------------------------------------eccCCCCCCCCCHHHHHHHHHHhCcCcccE
Confidence 111111 11233333333 33 23579
Q ss_pred EEEcCCccChHHhhhcCc---cccccCccccch-hccCcEEecchhhhHHHH
Q 001888 672 LAIGDGANDVGMLQEADI---GVGISGVEGMQA-VMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 672 laiGDG~ND~~mlk~Adv---GIa~~g~e~~~a-k~~aD~vl~~f~~l~~ll 719 (1000)
++|||+.||+.|.+.||+ +|++++...... +..||+++.++..+..++
T Consensus 163 i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el~~~~ 214 (226)
T 3mc1_A 163 IMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHKKI 214 (226)
T ss_dssp EEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHHHHHH
T ss_pred EEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHHHHHH
Confidence 999999999999999999 666644332222 578999999999988874
No 56
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=98.10 E-value=8.1e-06 Score=87.70 Aligned_cols=49 Identities=14% Similarity=0.155 Sum_probs=40.4
Q ss_pred cceeeEEeeecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001888 507 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 507 ~l~~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 558 (1000)
|.|++.- .+.+-+.+.++|++|+++|++++++|||....+..+...+++
T Consensus 17 DGTLl~~---~~~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 65 (275)
T 1xvi_A 17 DGTLLDS---HSYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGL 65 (275)
T ss_dssp TTTTSCS---SCCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTC
T ss_pred CCCCCCC---CCcCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 4555531 234557799999999999999999999999999999999876
No 57
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=98.09 E-value=1.3e-06 Score=92.19 Aligned_cols=56 Identities=21% Similarity=0.346 Sum_probs=44.8
Q ss_pred hHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhcc-------CcEEecch
Q 001888 656 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMS-------SDYAIAQF 712 (1000)
Q Consensus 656 qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~-------aD~vl~~f 712 (1000)
.|...++.+ +..| ..++++||+.||++|++.|++||+|++... ..+.. ||++..+.
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~~-~~k~~a~~~~~~a~~v~~~~ 228 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQP-ELLHWYDQWGDSRHYRAQSS 228 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCH-HHHHHHHHHCCTTEEECSSC
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCCcH-HHHHHHhcccccceeecCCc
Confidence 699888888 5554 469999999999999999999999965543 36664 88988753
No 58
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=98.06 E-value=1.5e-05 Score=81.30 Aligned_cols=126 Identities=20% Similarity=0.177 Sum_probs=88.7
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.++++.|++. ++++++|+.....+..+.+.+|+...-...+....+.
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------------------------- 121 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 121 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTS--------------------------
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCc--------------------------
Confidence 5789999999999999 9999999999999999999998743110001100000
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
.....-...|..|..+++.+......+++|||+.
T Consensus 122 ----------------------------------------------~~~~~~~p~p~~~~~~l~~l~~~~~~~~~iGD~~ 155 (206)
T 1rku_A 122 ----------------------------------------------RVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSY 155 (206)
T ss_dssp ----------------------------------------------CEEEEECCSSSHHHHHHHHHHHTTCEEEEEECSS
T ss_pred ----------------------------------------------eEEeeecCCCchHHHHHHHHHhcCCEEEEEeCCh
Confidence 0000012457889888888855567899999999
Q ss_pred cChHHhhhcCccccccCccccchhc-cCcEE-ecchhhhHHHH
Q 001888 679 NDVGMLQEADIGVGISGVEGMQAVM-SSDYA-IAQFRFLERLL 719 (1000)
Q Consensus 679 ND~~mlk~AdvGIa~~g~e~~~ak~-~aD~v-l~~f~~l~~ll 719 (1000)
||+.|.+.||+++.+.+.+. .+. +++++ +.++..+..+|
T Consensus 156 ~Di~~a~~aG~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~l 196 (206)
T 1rku_A 156 NDTTMLSEAHAGILFHAPEN--VIREFPQFPAVHTYEDLKREF 196 (206)
T ss_dssp TTHHHHHHSSEEEEESCCHH--HHHHCTTSCEECSHHHHHHHH
T ss_pred hhHHHHHhcCccEEECCcHH--HHHHHhhhccccchHHHHHHH
Confidence 99999999999998744332 333 45554 66677666553
No 59
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=98.06 E-value=6.8e-06 Score=83.93 Aligned_cols=124 Identities=16% Similarity=0.104 Sum_probs=84.2
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.+.++.|++.|+++.++|+.....+..+...+|+...-..
T Consensus 84 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~f~~---------------------------------- 129 (216)
T 2pib_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDV---------------------------------- 129 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE----------------------------------
T ss_pred CcCcCHHHHHHHHHHCCCCEEEEeCCcHHhHHHHHHhcChHHhcCE----------------------------------
Confidence 5789999999999999999999999999988888888887432111
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
++.+... -.....|+--..+.+.+.-....+++|||+.
T Consensus 130 --------------------~~~~~~~----------------------~~~kp~~~~~~~~~~~~~~~~~~~i~iGD~~ 167 (216)
T 2pib_A 130 --------------------MVFGDQV----------------------KNGKPDPEIYLLVLERLNVVPEKVVVFEDSK 167 (216)
T ss_dssp --------------------EECGGGS----------------------SSCTTSTHHHHHHHHHHTCCGGGEEEEECSH
T ss_pred --------------------EeecccC----------------------CCCCcCcHHHHHHHHHcCCCCceEEEEeCcH
Confidence 1111000 0001112222333444433346699999999
Q ss_pred cChHHhhhcCc-----cccccCccccchhccCcEEecchhhhHHHH
Q 001888 679 NDVGMLQEADI-----GVGISGVEGMQAVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 679 ND~~mlk~Adv-----GIa~~g~e~~~ak~~aD~vl~~f~~l~~ll 719 (1000)
||+.|.+.||+ +|+..+.... ....||+++.++..+..+|
T Consensus 168 ~Di~~a~~aG~~~i~~~v~~~~~~~~-~~~~a~~~~~~~~el~~~l 212 (216)
T 2pib_A 168 SGVEAAKSAGIERIYGVVHSLNDGKA-LLEAGAVALVKPEEILNVL 212 (216)
T ss_dssp HHHHHHHHTTCCEEEEECCSSSCCHH-HHHTTCSEEECGGGHHHHH
T ss_pred HHHHHHHHcCCcEEehccCCCCCchh-hcchhheeeCCHHHHHHHH
Confidence 99999999999 5554333322 2368999999998887763
No 60
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=98.04 E-value=6.2e-06 Score=86.36 Aligned_cols=120 Identities=17% Similarity=0.104 Sum_probs=83.5
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHH
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 597 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (1000)
-++.+++.++++.|++.|++++++|+.....+..+...+|+...-..+
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~-------------------------------- 156 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYI-------------------------------- 156 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEE--------------------------------
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEE--------------------------------
Confidence 357899999999999999999999999988888888888874321111
Q ss_pred HHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCC--hhhHHHHH----HHHhcC-CCE
Q 001888 598 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSS--PKQKALVT----RLVKGT-GKT 670 (1000)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~s--p~qK~~iV----~~l~~~-~~~ 670 (1000)
+.+... ..-|..++ +.+.-. ...
T Consensus 157 --------------------------------------------------~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~ 186 (240)
T 3sd7_A 157 --------------------------------------------------AGSNLDGTRVNKNEVIQYVLDLCNVKDKDK 186 (240)
T ss_dssp --------------------------------------------------EEECTTSCCCCHHHHHHHHHHHHTCCCGGG
T ss_pred --------------------------------------------------EeccccCCCCCCHHHHHHHHHHcCCCCCCc
Confidence 111111 11122333 333323 457
Q ss_pred EEEEcCCccChHHhhhcCc---cccccCccccc-hhccCcEEecchhhhHHHH
Q 001888 671 TLAIGDGANDVGMLQEADI---GVGISGVEGMQ-AVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 671 vlaiGDG~ND~~mlk~Adv---GIa~~g~e~~~-ak~~aD~vl~~f~~l~~ll 719 (1000)
+++|||+.||+.|.+.||+ +|+++...... .+..||+++.++..+..+|
T Consensus 187 ~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l 239 (240)
T 3sd7_A 187 VIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDIL 239 (240)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTHHHHH
T ss_pred EEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHHHHHh
Confidence 9999999999999999999 55543322221 2478999999999888774
No 61
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=98.02 E-value=5.3e-06 Score=86.09 Aligned_cols=126 Identities=15% Similarity=0.084 Sum_probs=82.7
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHH
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 597 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (1000)
-++.+++.+.++.|++.|++++++|+.....+..+....|+...-..
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 136 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKIN--------------------------------- 136 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSC---------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhhe---------------------------------
Confidence 35779999999999999999999999999888888888887432111
Q ss_pred HHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCC
Q 001888 598 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG 677 (1000)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG 677 (1000)
++.+... -.....|+--..+.+.+.-....+++|||+
T Consensus 137 ---------------------~~~~~~~----------------------~~~kp~~~~~~~~~~~l~~~~~~~i~iGD~ 173 (233)
T 3s6j_A 137 ---------------------IVTRDDV----------------------SYGKPDPDLFLAAAKKIGAPIDECLVIGDA 173 (233)
T ss_dssp ---------------------EECGGGS----------------------SCCTTSTHHHHHHHHHTTCCGGGEEEEESS
T ss_pred ---------------------eeccccC----------------------CCCCCChHHHHHHHHHhCCCHHHEEEEeCC
Confidence 0110000 000011111122222222223569999999
Q ss_pred ccChHHhhhcCc---cccccCccccchhcc-CcEEecchhhhHHHH
Q 001888 678 ANDVGMLQEADI---GVGISGVEGMQAVMS-SDYAIAQFRFLERLL 719 (1000)
Q Consensus 678 ~ND~~mlk~Adv---GIa~~g~e~~~ak~~-aD~vl~~f~~l~~ll 719 (1000)
.||+.|.+.||+ +|+++.......+.. ||+++.++..+..+|
T Consensus 174 ~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~l 219 (233)
T 3s6j_A 174 IWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNHL 219 (233)
T ss_dssp HHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHHHHTG
T ss_pred HHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHHHHHH
Confidence 999999999999 555543333223443 999999999888874
No 62
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=98.01 E-value=7.7e-06 Score=84.75 Aligned_cols=126 Identities=19% Similarity=0.271 Sum_probs=85.7
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCce--EEEEecCCchhhHhhhhccHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMK--QIVITLDSPDMEALEKQGDKENITKVSLESVT 596 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (1000)
++.|++.++++.|+++|++++++||.....+..+.+.+|+.....- .+.....
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~------------------------- 140 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFN------------------------- 140 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTT-------------------------
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCC-------------------------
Confidence 6889999999999999999999999999999999999998531100 0000000
Q ss_pred HHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEE-cC-----ChhhHHHHHHHH-hcCC-
Q 001888 597 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICC-RS-----SPKQKALVTRLV-KGTG- 668 (1000)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~-r~-----sp~qK~~iV~~l-~~~~- 668 (1000)
..+.+ .. .+..|..+++.+ +..|
T Consensus 141 -------------------------------------------------~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~ 171 (225)
T 1nnl_A 141 -------------------------------------------------GEYAGFDETQPTAESGGKGKVIKLLKEKFHF 171 (225)
T ss_dssp -------------------------------------------------SCEEEECTTSGGGSTTHHHHHHHHHHHHHCC
T ss_pred -------------------------------------------------CcEecCCCCCcccCCCchHHHHHHHHHHcCC
Confidence 00111 11 122455555554 4333
Q ss_pred CEEEEEcCCccChHHhhhcCccccccCccc-cchhccCcEEecchhhhHHH
Q 001888 669 KTTLAIGDGANDVGMLQEADIGVGISGVEG-MQAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 669 ~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~-~~ak~~aD~vl~~f~~l~~l 718 (1000)
..+++|||+.||+.|.+.||++|++..... ......+|+++.++..+..+
T Consensus 172 ~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~ 222 (225)
T 1nnl_A 172 KKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGE 222 (225)
T ss_dssp SCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGGCC-
T ss_pred CcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeecCHHHHHHH
Confidence 679999999999999999999887743221 12345689999988876554
No 63
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=98.01 E-value=1.1e-05 Score=83.84 Aligned_cols=41 Identities=15% Similarity=0.053 Sum_probs=38.7
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
.+.+++.+.++.|++.|+++.++||.....+..+++.+|+.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~ 132 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ 132 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 57899999999999999999999999999999999999984
No 64
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=98.00 E-value=7e-06 Score=80.40 Aligned_cols=109 Identities=13% Similarity=0.055 Sum_probs=76.5
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHHH
Q 001888 520 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQI 599 (1000)
Q Consensus 520 lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (1000)
+.+++.++|+.|+++|++++++||+....+..+.+.+|+.. .+++.
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~------~~~~~---------------------------- 82 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE------IYTGS---------------------------- 82 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE------EEECC----------------------------
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh------hccCC----------------------------
Confidence 45667899999999999999999999999999999988731 00000
Q ss_pred HhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCcc
Q 001888 600 REGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGAN 679 (1000)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~N 679 (1000)
...|+--..+++.+.-....+++|||+.|
T Consensus 83 ---------------------------------------------------kp~~~~~~~~~~~~~~~~~~~~~vGD~~~ 111 (162)
T 2p9j_A 83 ---------------------------------------------------YKKLEIYEKIKEKYSLKDEEIGFIGDDVV 111 (162)
T ss_dssp -----------------------------------------------------CHHHHHHHHHHTTCCGGGEEEEECSGG
T ss_pred ---------------------------------------------------CCCHHHHHHHHHHcCCCHHHEEEECCCHH
Confidence 00111111222222223356999999999
Q ss_pred ChHHhhhcCccccccCccccchhccCcEEecchhh
Q 001888 680 DVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRF 714 (1000)
Q Consensus 680 D~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~~ 714 (1000)
|+.|.+.||+++++.+... ..+..||+++.+...
T Consensus 112 Di~~a~~ag~~~~~~~~~~-~~~~~a~~v~~~~~~ 145 (162)
T 2p9j_A 112 DIEVMKKVGFPVAVRNAVE-EVRKVAVYITQRNGG 145 (162)
T ss_dssp GHHHHHHSSEEEECTTSCH-HHHHHCSEECSSCSS
T ss_pred HHHHHHHCCCeEEecCccH-HHHhhCCEEecCCCC
Confidence 9999999999988754322 266789999987543
No 65
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=97.99 E-value=7e-06 Score=83.11 Aligned_cols=118 Identities=17% Similarity=0.183 Sum_probs=78.2
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
.+.+++.+.++.+++.|++++++|+....... .....|+...-.
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~----------------------------------- 128 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFT----------------------------------- 128 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEE-----------------------------------
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhee-----------------------------------
Confidence 46899999999999999999999999877766 666666532100
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
.++.+... -.....|+--..+.+.+.-....+++|||+.
T Consensus 129 -------------------~~~~~~~~----------------------~~~Kp~~~~~~~~~~~~~i~~~~~~~iGD~~ 167 (207)
T 2go7_A 129 -------------------EILTSQSG----------------------FVRKPSPEAATYLLDKYQLNSDNTYYIGDRT 167 (207)
T ss_dssp -------------------EEECGGGC----------------------CCCTTSSHHHHHHHHHHTCCGGGEEEEESSH
T ss_pred -------------------eEEecCcC----------------------CCCCCCcHHHHHHHHHhCCCcccEEEECCCH
Confidence 01110000 0000112222334444433345699999999
Q ss_pred cChHHhhhcCcc-ccccCccccchhccCcEEecchhhhHHH
Q 001888 679 NDVGMLQEADIG-VGISGVEGMQAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 679 ND~~mlk~AdvG-Ia~~g~e~~~ak~~aD~vl~~f~~l~~l 718 (1000)
||++|++.||++ |+|.+.. . .||+++.++..+..+
T Consensus 168 nDi~~~~~aG~~~i~~~~~~-~----~a~~v~~~~~el~~~ 203 (207)
T 2go7_A 168 LDVEFAQNSGIQSINFLEST-Y----EGNHRIQALADISRI 203 (207)
T ss_dssp HHHHHHHHHTCEEEESSCCS-C----TTEEECSSTTHHHHH
T ss_pred HHHHHHHHCCCeEEEEecCC-C----CCCEEeCCHHHHHHH
Confidence 999999999998 6775443 2 689999988877665
No 66
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.96 E-value=9e-06 Score=83.70 Aligned_cols=41 Identities=10% Similarity=0.031 Sum_probs=35.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
.+.+++.+.++.+++.|++++++|+.....+......+|+.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~ 129 (225)
T 3d6j_A 89 ILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPD 129 (225)
T ss_dssp EECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCT
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCch
Confidence 45689999999999999999999999988888777777764
No 67
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=97.95 E-value=1.1e-05 Score=82.22 Aligned_cols=124 Identities=10% Similarity=0.031 Sum_probs=83.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-..+
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~--------------------------------- 135 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIV--------------------------------- 135 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEE---------------------------------
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeE---------------------------------
Confidence 57899999999999999999999999998888888888874321111
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
+.+... -.....|+--..+.+.+.-....+++|||+.
T Consensus 136 ---------------------~~~~~~----------------------~~~kp~~~~~~~~~~~~~~~~~~~~~iGD~~ 172 (214)
T 3e58_A 136 ---------------------LSGEEF----------------------KESKPNPEIYLTALKQLNVQASRALIIEDSE 172 (214)
T ss_dssp ---------------------EEGGGC----------------------SSCTTSSHHHHHHHHHHTCCGGGEEEEECSH
T ss_pred ---------------------eecccc----------------------cCCCCChHHHHHHHHHcCCChHHeEEEeccH
Confidence 111000 0001112222333444433346699999999
Q ss_pred cChHHhhhcCccccccCcc-ccchhccCcEEecchhhhHHH
Q 001888 679 NDVGMLQEADIGVGISGVE-GMQAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 679 ND~~mlk~AdvGIa~~g~e-~~~ak~~aD~vl~~f~~l~~l 718 (1000)
||+.|.+.||+++.+.+.. .......+|+++.++..+..+
T Consensus 173 ~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~~~el~~~ 213 (214)
T 3e58_A 173 KGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDSLTDVLDL 213 (214)
T ss_dssp HHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESSGGGGGGG
T ss_pred hhHHHHHHCCCEEEEECCCCccchhccHHHHHHHHHHHHhh
Confidence 9999999999988653321 111347799999998876543
No 68
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=97.93 E-value=1.2e-05 Score=84.58 Aligned_cols=125 Identities=20% Similarity=0.186 Sum_probs=82.4
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHH
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 597 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (1000)
-++.+++.++++.|++.|++++++|+.....+..+...+|+...-..
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~--------------------------------- 159 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSE--------------------------------- 159 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEE---------------------------------
Confidence 36789999999999999999999999999888888888887432111
Q ss_pred HHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCC
Q 001888 598 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG 677 (1000)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG 677 (1000)
++.+... ......|+--..+.+.+.-....+++|||+
T Consensus 160 ---------------------~~~~~~~----------------------~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~ 196 (243)
T 2hsz_A 160 ---------------------MLGGQSL----------------------PEIKPHPAPFYYLCGKFGLYPKQILFVGDS 196 (243)
T ss_dssp ---------------------EECTTTS----------------------SSCTTSSHHHHHHHHHHTCCGGGEEEEESS
T ss_pred ---------------------EEecccC----------------------CCCCcCHHHHHHHHHHhCcChhhEEEEcCC
Confidence 1111000 000011222333344443334569999999
Q ss_pred ccChHHhhhcCccc-cccCc---cccchhccCcEEecchhhhHHH
Q 001888 678 ANDVGMLQEADIGV-GISGV---EGMQAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 678 ~ND~~mlk~AdvGI-a~~g~---e~~~ak~~aD~vl~~f~~l~~l 718 (1000)
.||+.|.+.||+++ ++... .....+..+|+++.++..+..+
T Consensus 197 ~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~el~~~ 241 (243)
T 2hsz_A 197 QNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKI 241 (243)
T ss_dssp HHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGG
T ss_pred HHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECCHHHHHHH
Confidence 99999999999984 44221 1111456799999887776543
No 69
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=97.93 E-value=1.2e-05 Score=83.43 Aligned_cols=126 Identities=10% Similarity=-0.012 Sum_probs=85.3
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHH
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 597 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (1000)
-++.+++.++++.|++.|+++.++|+.....+..+...+|+...-..+
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~-------------------------------- 145 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHV-------------------------------- 145 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEE--------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEE--------------------------------
Confidence 357899999999999999999999999998888888888874321111
Q ss_pred HHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCC
Q 001888 598 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG 677 (1000)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG 677 (1000)
+.+... -.....|+--..+.+.+.-....+++|||+
T Consensus 146 ----------------------~~~~~~----------------------~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~ 181 (233)
T 3umb_A 146 ----------------------LSVDAV----------------------RLYKTAPAAYALAPRAFGVPAAQILFVSSN 181 (233)
T ss_dssp ----------------------EEGGGT----------------------TCCTTSHHHHTHHHHHHTSCGGGEEEEESC
T ss_pred ----------------------EEeccc----------------------CCCCcCHHHHHHHHHHhCCCcccEEEEeCC
Confidence 110000 000111222223333333333569999999
Q ss_pred ccChHHhhhcCcccccc---CccccchhccCcEEecchhhhHHHH
Q 001888 678 ANDVGMLQEADIGVGIS---GVEGMQAVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 678 ~ND~~mlk~AdvGIa~~---g~e~~~ak~~aD~vl~~f~~l~~ll 719 (1000)
.||+.|.+.||+++.+- +......+..+|+++.++..+..+|
T Consensus 182 ~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el~~~l 226 (233)
T 3umb_A 182 GWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDLLQFV 226 (233)
T ss_dssp HHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHHHHHH
Confidence 99999999999999772 2222224567999999999888874
No 70
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=97.92 E-value=1.5e-05 Score=82.49 Aligned_cols=126 Identities=13% Similarity=0.038 Sum_probs=83.8
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHH
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 597 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (1000)
-++.+++.+.++.|++.|+++.++|+.....+..+...+|+...-..
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 141 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDH--------------------------------- 141 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSE---------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcce---------------------------------
Confidence 35789999999999999999999999998888888888877432111
Q ss_pred HHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCC
Q 001888 598 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG 677 (1000)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG 677 (1000)
++.+... -.....|.--..+.+.+.-....+++|||+
T Consensus 142 ---------------------~~~~~~~----------------------~~~kp~~~~~~~~~~~~~~~~~~~~~iGD~ 178 (230)
T 3um9_A 142 ---------------------LISVDEV----------------------RLFKPHQKVYELAMDTLHLGESEILFVSCN 178 (230)
T ss_dssp ---------------------EEEGGGT----------------------TCCTTCHHHHHHHHHHHTCCGGGEEEEESC
T ss_pred ---------------------eEehhhc----------------------ccCCCChHHHHHHHHHhCCCcccEEEEeCC
Confidence 1111000 000011222223333333333569999999
Q ss_pred ccChHHhhhcCccccccC---ccccchhccCcEEecchhhhHHHH
Q 001888 678 ANDVGMLQEADIGVGISG---VEGMQAVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 678 ~ND~~mlk~AdvGIa~~g---~e~~~ak~~aD~vl~~f~~l~~ll 719 (1000)
.||+.|.+.||+++.+-+ ......+..+|+++.++..+..+|
T Consensus 179 ~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 223 (230)
T 3um9_A 179 SWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASRF 223 (230)
T ss_dssp HHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHHHHTC
T ss_pred HHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHHHHHH
Confidence 999999999999987622 222224568999999988877663
No 71
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=97.91 E-value=1.7e-05 Score=82.15 Aligned_cols=125 Identities=16% Similarity=0.153 Sum_probs=83.8
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHH
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 597 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (1000)
-++.+++.++++.|++.|+++.++|+.....+..+.+.+|+...-..
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~--------------------------------- 128 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDL--------------------------------- 128 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheE---------------------------------
Confidence 36789999999999999999999999998888888888887431111
Q ss_pred HHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCC
Q 001888 598 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG 677 (1000)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG 677 (1000)
++.+... ......|+-...+.+.+.-....+++|||+
T Consensus 129 ---------------------i~~~~~~----------------------~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~ 165 (222)
T 2nyv_A 129 ---------------------IVGGDTF----------------------GEKKPSPTPVLKTLEILGEEPEKALIVGDT 165 (222)
T ss_dssp ---------------------EECTTSS----------------------CTTCCTTHHHHHHHHHHTCCGGGEEEEESS
T ss_pred ---------------------EEecCcC----------------------CCCCCChHHHHHHHHHhCCCchhEEEECCC
Confidence 1110000 000111333333444443334569999999
Q ss_pred ccChHHhhhcCcc-ccccC-ccccchhccCcEEecchhhhHHHH
Q 001888 678 ANDVGMLQEADIG-VGISG-VEGMQAVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 678 ~ND~~mlk~AdvG-Ia~~g-~e~~~ak~~aD~vl~~f~~l~~ll 719 (1000)
.||+.|.+.||++ |++.. ...... ..+|+++.++..+..++
T Consensus 166 ~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~~~el~~~l 208 (222)
T 2nyv_A 166 DADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLSRPSDLVKLM 208 (222)
T ss_dssp HHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEESSTTHHHHHH
T ss_pred HHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEECCHHHHHHHH
Confidence 9999999999988 55532 211112 67899999988887774
No 72
>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*
Probab=97.91 E-value=4.8e-06 Score=88.82 Aligned_cols=55 Identities=13% Similarity=0.241 Sum_probs=43.7
Q ss_pred hHHHHHHHH-hcCCCEEEEEcC----CccChHHhhhcC-ccccccCccccchhccCcEEecc
Q 001888 656 QKALVTRLV-KGTGKTTLAIGD----GANDVGMLQEAD-IGVGISGVEGMQAVMSSDYAIAQ 711 (1000)
Q Consensus 656 qK~~iV~~l-~~~~~~vlaiGD----G~ND~~mlk~Ad-vGIa~~g~e~~~ak~~aD~vl~~ 711 (1000)
.|+..++.+ .-....|+|||| |.||++||+.|+ +|++|.++.. .++..||++...
T Consensus 197 sKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~-~~k~~a~~v~~~ 257 (262)
T 2fue_A 197 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQD-TVQRCREIFFPE 257 (262)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHH-HHHHHHHHHCTT
T ss_pred CHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCH-HHHHhhheeCCC
Confidence 599988888 223368999999 999999999999 5999965543 378888887654
No 73
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=97.90 E-value=5.1e-06 Score=87.58 Aligned_cols=43 Identities=21% Similarity=0.357 Sum_probs=35.8
Q ss_pred hHHHHHHHHhcCCCEEEEEcC----CccChHHhhhcC-ccccccCccc
Q 001888 656 QKALVTRLVKGTGKTTLAIGD----GANDVGMLQEAD-IGVGISGVEG 698 (1000)
Q Consensus 656 qK~~iV~~l~~~~~~vlaiGD----G~ND~~mlk~Ad-vGIa~~g~e~ 698 (1000)
.|+..++.+.+....|+|+|| |.||++||+.|+ +|++|++.+.
T Consensus 187 ~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~ 234 (246)
T 3f9r_A 187 DKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKD 234 (246)
T ss_dssp SGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHH
T ss_pred CHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHH
Confidence 699999998336688999999 799999999886 7888866543
No 74
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=97.88 E-value=1.7e-05 Score=82.49 Aligned_cols=118 Identities=15% Similarity=0.158 Sum_probs=74.0
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.+.++.|++.|+++.++|+... +..+...+|+...-..
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~---------------------------------- 135 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHA---------------------------------- 135 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSE----------------------------------
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCE----------------------------------
Confidence 4789999999999999999999999754 6666777776321110
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
++.+... -.....|+--..+.+.+.-....+++|||+.
T Consensus 136 --------------------i~~~~~~----------------------~~~Kp~~~~~~~~~~~lgi~~~~~i~vGDs~ 173 (233)
T 3nas_A 136 --------------------IVDPTTL----------------------AKGKPDPDIFLTAAAMLDVSPADCAAIEDAE 173 (233)
T ss_dssp --------------------ECCC-------------------------------CCHHHHHHHHHTSCGGGEEEEECSH
T ss_pred --------------------EeeHhhC----------------------CCCCCChHHHHHHHHHcCCCHHHEEEEeCCH
Confidence 1111000 0001112222333444433346799999999
Q ss_pred cChHHhhhcCccccccCccccchhccCcEEecchhhhH
Q 001888 679 NDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLE 716 (1000)
Q Consensus 679 ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~~l~ 716 (1000)
||+.|.+.||+++++.+.... .+ .||+++.++..+.
T Consensus 174 ~Di~~a~~aG~~~~~~~~~~~-~~-~ad~v~~s~~el~ 209 (233)
T 3nas_A 174 AGISAIKSAGMFAVGVGQGQP-ML-GADLVVRQTSDLT 209 (233)
T ss_dssp HHHHHHHHTTCEEEECC---------CSEECSSGGGCC
T ss_pred HHHHHHHHcCCEEEEECCccc-cc-cCCEEeCChHhCC
Confidence 999999999999987655432 34 8999999877654
No 75
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=97.86 E-value=3.1e-05 Score=80.34 Aligned_cols=121 Identities=15% Similarity=0.116 Sum_probs=80.0
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~-------------------------------- 150 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSII-------------------------------- 150 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEE--------------------------------
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEE--------------------------------
Confidence 578999999999999999999999999888888888888743211111
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCC-EEEEEcCC
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGK-TTLAIGDG 677 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~-~vlaiGDG 677 (1000)
.+... -.....|+--..+.+.+.-... .+++|||+
T Consensus 151 ----------------------~~~~~----------------------~~~Kp~~~~~~~~~~~lgi~~~~~~v~vGD~ 186 (231)
T 3kzx_A 151 ----------------------GSGDT----------------------GTIKPSPEPVLAALTNINIEPSKEVFFIGDS 186 (231)
T ss_dssp ----------------------EETSS----------------------SCCTTSSHHHHHHHHHHTCCCSTTEEEEESS
T ss_pred ----------------------ccccc----------------------CCCCCChHHHHHHHHHcCCCcccCEEEEcCC
Confidence 00000 0001112222334444433334 79999999
Q ss_pred ccChHHhhhcCc-cccccCccccchhccCcEEecchhhhHHHH
Q 001888 678 ANDVGMLQEADI-GVGISGVEGMQAVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 678 ~ND~~mlk~Adv-GIa~~g~e~~~ak~~aD~vl~~f~~l~~ll 719 (1000)
.||+.|.+.||+ +|.+.+... ..+|+++.++..+..+|
T Consensus 187 ~~Di~~a~~aG~~~v~~~~~~~----~~~~~~~~~~~el~~~l 225 (231)
T 3kzx_A 187 ISDIQSAIEAGCLPIKYGSTNI----IKDILSFKNFYDIRNFI 225 (231)
T ss_dssp HHHHHHHHHTTCEEEEECC---------CCEEESSHHHHHHHH
T ss_pred HHHHHHHHHCCCeEEEECCCCC----CCCceeeCCHHHHHHHH
Confidence 999999999998 456643332 46889999988887764
No 76
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=97.84 E-value=3.2e-05 Score=80.11 Aligned_cols=125 Identities=12% Similarity=0.090 Sum_probs=80.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCc---hhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDK---METAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESV 595 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~---~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (1000)
.+.+++.+.++.|++.|+++.++|+.. ...+.......|+...-..
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~------------------------------- 147 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDK------------------------------- 147 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSE-------------------------------
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhh-------------------------------
Confidence 458999999999999999999999998 7777777777776321111
Q ss_pred HHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEc
Q 001888 596 TKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIG 675 (1000)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiG 675 (1000)
++.+... -.....|+--..+.+.+.-....+++||
T Consensus 148 -----------------------~~~~~~~----------------------~~~kp~~~~~~~~~~~lgi~~~~~~~iG 182 (235)
T 2om6_A 148 -----------------------TFFADEV----------------------LSYKPRKEMFEKVLNSFEVKPEESLHIG 182 (235)
T ss_dssp -----------------------EEEHHHH----------------------TCCTTCHHHHHHHHHHTTCCGGGEEEEE
T ss_pred -----------------------heecccc----------------------CCCCCCHHHHHHHHHHcCCCccceEEEC
Confidence 0110000 0000112111222222322235799999
Q ss_pred CCc-cChHHhhhcCcccccc--CccccchhccCcEEecchhhhHHHH
Q 001888 676 DGA-NDVGMLQEADIGVGIS--GVEGMQAVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 676 DG~-ND~~mlk~AdvGIa~~--g~e~~~ak~~aD~vl~~f~~l~~ll 719 (1000)
|+. ||+.|.+.||+++++- +......+..+|+++.++..+..+|
T Consensus 183 D~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 229 (235)
T 2om6_A 183 DTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANLKDVI 229 (235)
T ss_dssp SCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESSGGGHHHHH
T ss_pred CChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhhHHHHHHHH
Confidence 999 9999999999998772 2222224456899999888877663
No 77
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=97.83 E-value=1.3e-05 Score=82.30 Aligned_cols=47 Identities=4% Similarity=-0.003 Sum_probs=38.3
Q ss_pred CCEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecchhhhH
Q 001888 668 GKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFRFLE 716 (1000)
Q Consensus 668 ~~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~~l~ 716 (1000)
...+++|||+.||+.|++.||++++|.+... ..+ .||+++.++..+.
T Consensus 162 ~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~-~~~-~a~~v~~~~~el~ 208 (221)
T 2wf7_A 162 PSESIGLEDSQAGIQAIKDSGALPIGVGRPE-DLG-DDIVIVPDTSHYT 208 (221)
T ss_dssp GGGEEEEESSHHHHHHHHHHTCEEEEESCHH-HHC-SSSEEESSGGGCC
T ss_pred hhHeEEEeCCHHHHHHHHHCCCEEEEECCHH-Hhc-cccchhcCHHhCC
Confidence 3569999999999999999999998866543 255 8999998876643
No 78
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=97.81 E-value=1.6e-05 Score=84.75 Aligned_cols=40 Identities=30% Similarity=0.302 Sum_probs=34.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 558 (1000)
++.+++.+.++.|++.|+++.++|+.....+..+...+|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~ 142 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAAL 142 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 4679999999999999999999999988777777666654
No 79
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=97.80 E-value=2e-05 Score=84.74 Aligned_cols=128 Identities=15% Similarity=0.107 Sum_probs=82.5
Q ss_pred cccCCcHHHHHHHHHcCC--eEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGI--KVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVT 596 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGI--kv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (1000)
++.+++.++++.|++.|+ +++++|+.....+..+...+|+...-..++ ...
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~--~~~------------------------- 194 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLT--YCD------------------------- 194 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEE--CCC-------------------------
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEE--Eec-------------------------
Confidence 567899999999999999 999999999888888888888743211111 000
Q ss_pred HHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCC-CEEEEEc
Q 001888 597 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTG-KTTLAIG 675 (1000)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~-~~vlaiG 675 (1000)
... ..+..+...|+--..+.+.+.-.. ..+++||
T Consensus 195 ---------------------------~~~------------------~~~~~~Kp~~~~~~~~~~~lgi~~~~~~i~vG 229 (282)
T 3nuq_A 195 ---------------------------YSR------------------TDTLVCKPHVKAFEKAMKESGLARYENAYFID 229 (282)
T ss_dssp ---------------------------CSS------------------CSSCCCTTSHHHHHHHHHHHTCCCGGGEEEEE
T ss_pred ---------------------------cCC------------------CcccCCCcCHHHHHHHHHHcCCCCcccEEEEc
Confidence 000 000000111222222333333333 6799999
Q ss_pred CCccChHHhhhcCccccccCcccc-----chhccCcEEecchhhhHHH
Q 001888 676 DGANDVGMLQEADIGVGISGVEGM-----QAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 676 DG~ND~~mlk~AdvGIa~~g~e~~-----~ak~~aD~vl~~f~~l~~l 718 (1000)
|+.||+.|.+.||+|++|...... .....||+++.++..+..+
T Consensus 230 D~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~~ 277 (282)
T 3nuq_A 230 DSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHV 277 (282)
T ss_dssp SCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGGGGT
T ss_pred CCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHHHHH
Confidence 999999999999998766333221 1244789999998887765
No 80
>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A
Probab=97.79 E-value=2e-05 Score=83.08 Aligned_cols=52 Identities=23% Similarity=0.289 Sum_probs=40.5
Q ss_pred hHHHHHHHH-hcCCCEEEEEcC----CccChHHhhhcCc-cccccCccccchhccCcEE
Q 001888 656 QKALVTRLV-KGTGKTTLAIGD----GANDVGMLQEADI-GVGISGVEGMQAVMSSDYA 708 (1000)
Q Consensus 656 qK~~iV~~l-~~~~~~vlaiGD----G~ND~~mlk~Adv-GIa~~g~e~~~ak~~aD~v 708 (1000)
.|+..++.+ .-....|+|||| |.||++||+.|+. |++|+++... +|..||+|
T Consensus 188 ~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~-vk~~A~~v 245 (246)
T 2amy_A 188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDT-RRICELLF 245 (246)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHH-HHHHHHHC
T ss_pred chHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHH-HHHHHhhc
Confidence 588888888 223478999999 9999999999987 9999776544 88888886
No 81
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=97.78 E-value=3.9e-05 Score=76.30 Aligned_cols=61 Identities=16% Similarity=0.096 Sum_probs=41.7
Q ss_pred HHHHHhcCCCEEEEEcCCccChHHhhhcCc---cccccCccccch---hccCcEEecchhhhHHHHH
Q 001888 660 VTRLVKGTGKTTLAIGDGANDVGMLQEADI---GVGISGVEGMQA---VMSSDYAIAQFRFLERLLL 720 (1000)
Q Consensus 660 iV~~l~~~~~~vlaiGDG~ND~~mlk~Adv---GIa~~g~e~~~a---k~~aD~vl~~f~~l~~lll 720 (1000)
+.+.+.-....+++|||+.||+.|.+.||+ +|..+....... ...+|+++.++..+..+|+
T Consensus 110 ~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el~~~l~ 176 (179)
T 3l8h_A 110 IARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAVAEQLL 176 (179)
T ss_dssp HHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHHHHHHH
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHHHHHHH
Confidence 333343334669999999999999999996 454432222111 2468999999998888754
No 82
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=97.78 E-value=1.9e-05 Score=88.45 Aligned_cols=41 Identities=7% Similarity=0.158 Sum_probs=38.9
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 558 (1000)
-++.|++.+.|+.|+++|++|+|+||.....+..+|.++|+
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~ 260 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNN 260 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTS
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCc
Confidence 35789999999999999999999999999999999999986
No 83
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=97.78 E-value=5.3e-05 Score=79.14 Aligned_cols=124 Identities=16% Similarity=0.106 Sum_probs=81.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.+.++.|++.|+++.++|+.....+..+...+|+...-..+
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~--------------------------------- 151 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSC--------------------------------- 151 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEE---------------------------------
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEE---------------------------------
Confidence 57899999999999999999999999988888888888874321111
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
+.+... -.....|+--..+.+.+.-....+++|||+.
T Consensus 152 ---------------------~~~~~~----------------------~~~Kp~~~~~~~~~~~~~~~~~~~~~iGD~~ 188 (240)
T 2no4_A 152 ---------------------LSADDL----------------------KIYKPDPRIYQFACDRLGVNPNEVCFVSSNA 188 (240)
T ss_dssp ---------------------EEGGGT----------------------TCCTTSHHHHHHHHHHHTCCGGGEEEEESCH
T ss_pred ---------------------EEcccc----------------------CCCCCCHHHHHHHHHHcCCCcccEEEEeCCH
Confidence 110000 0001112222233333332335689999999
Q ss_pred cChHHhhhcCccc---cccCccccchhccC-cEEecchhhhHHHH
Q 001888 679 NDVGMLQEADIGV---GISGVEGMQAVMSS-DYAIAQFRFLERLL 719 (1000)
Q Consensus 679 ND~~mlk~AdvGI---a~~g~e~~~ak~~a-D~vl~~f~~l~~ll 719 (1000)
||+.|.+.||+++ ...+. ....+..+ |+++.++..+..+|
T Consensus 189 ~Di~~a~~aG~~~~~v~~~~~-~~~~~~~~~~~~~~~~~el~~~l 232 (240)
T 2no4_A 189 WDLGGAGKFGFNTVRINRQGN-PPEYEFAPLKHQVNSLSELWPLL 232 (240)
T ss_dssp HHHHHHHHHTCEEEEECTTCC-CCCCTTSCCSEEESSGGGHHHHH
T ss_pred HHHHHHHHCCCEEEEECCCCC-CCcccCCCCceeeCCHHHHHHHH
Confidence 9999999999664 32222 22234557 99999988877663
No 84
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=97.76 E-value=3.7e-05 Score=79.76 Aligned_cols=41 Identities=22% Similarity=0.201 Sum_probs=36.4
Q ss_pred cccCCcHHHHHHHHHc-CCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQA-GIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~a-GIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
++.+++.+.++.|++. |+++.++|+.....+..+...+|+.
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGID 134 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCS
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCch
Confidence 4679999999999999 9999999999988888888877764
No 85
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=97.74 E-value=6.6e-05 Score=77.80 Aligned_cols=123 Identities=15% Similarity=0.191 Sum_probs=82.0
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.+.++.|++. +++.++|+.....+..+...+|+...-..
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~---------------------------------- 144 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDS---------------------------------- 144 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSE----------------------------------
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcce----------------------------------
Confidence 4679999999999999 99999999998888888888877432111
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
++.+... -.....|+--..+.+.+.-....+++|||+.
T Consensus 145 --------------------~~~~~~~----------------------~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~ 182 (234)
T 3u26_A 145 --------------------ITTSEEA----------------------GFFKPHPRIFELALKKAGVKGEEAVYVGDNP 182 (234)
T ss_dssp --------------------EEEHHHH----------------------TBCTTSHHHHHHHHHHHTCCGGGEEEEESCT
T ss_pred --------------------eEecccc----------------------CCCCcCHHHHHHHHHHcCCCchhEEEEcCCc
Confidence 1110000 0001112222233333433346799999997
Q ss_pred -cChHHhhhcCc---cccccCccccchhccCcEEecchhhhHHHH
Q 001888 679 -NDVGMLQEADI---GVGISGVEGMQAVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 679 -ND~~mlk~Adv---GIa~~g~e~~~ak~~aD~vl~~f~~l~~ll 719 (1000)
||+.|.+.||+ +|++.+... ..+..+|+++.++..+..+|
T Consensus 183 ~~Di~~a~~aG~~~~~v~~~~~~~-~~~~~a~~~~~~~~el~~~l 226 (234)
T 3u26_A 183 VKDCGGSKNLGMTSILLDRKGEKR-EFWDKCDFIVSDLREVIKIV 226 (234)
T ss_dssp TTTHHHHHTTTCEEEEECSSSTTG-GGGGGCSEEESSTHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCCcc-ccccCCCEeeCCHHHHHHHH
Confidence 99999999995 566544332 25568999999988887764
No 86
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=97.74 E-value=4e-05 Score=79.57 Aligned_cols=124 Identities=11% Similarity=0.078 Sum_probs=81.6
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.+.++.|++.|+++.++|+.....+..+...+|+...-..+
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~--------------------------------- 141 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHL--------------------------------- 141 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEE---------------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheE---------------------------------
Confidence 57899999999999999999999999988888888888874321111
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
+.+... -.....|+--..+.+.+.-....+++|||+.
T Consensus 142 ---------------------~~~~~~----------------------~~~Kp~~~~~~~~~~~~~~~~~~~~~iGD~~ 178 (232)
T 1zrn_A 142 ---------------------LSVDPV----------------------QVYKPDNRVYELAEQALGLDRSAILFVASNA 178 (232)
T ss_dssp ---------------------EESGGG----------------------TCCTTSHHHHHHHHHHHTSCGGGEEEEESCH
T ss_pred ---------------------EEeccc----------------------CCCCCCHHHHHHHHHHcCCCcccEEEEeCCH
Confidence 111000 0001112222333344432335689999999
Q ss_pred cChHHhhhcCccccccCc---cccchhccCcEEecchhhhHHH
Q 001888 679 NDVGMLQEADIGVGISGV---EGMQAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 679 ND~~mlk~AdvGIa~~g~---e~~~ak~~aD~vl~~f~~l~~l 718 (1000)
||+.|.+.||+++.+-.. .....+..+|+++.++..+..+
T Consensus 179 ~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 221 (232)
T 1zrn_A 179 WDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVEL 221 (232)
T ss_dssp HHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTT
T ss_pred HHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECCHHHHHHH
Confidence 999999999999865221 1112346789999887776554
No 87
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=97.72 E-value=9.5e-05 Score=76.29 Aligned_cols=41 Identities=27% Similarity=0.252 Sum_probs=35.7
Q ss_pred cccCCcHHHHHHHHHcC-CeEEEEcCCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAG-IKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aG-Ikv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
++.+++.+.++.|++.| +++.++|+.....+..+...+|+.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~ 146 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLS 146 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCG
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcH
Confidence 57899999999999999 999999998887777777777763
No 88
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=97.69 E-value=3.8e-05 Score=82.00 Aligned_cols=41 Identities=32% Similarity=0.167 Sum_probs=35.8
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
++.+++.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~ 151 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQ 151 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHT
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcc
Confidence 57799999999999999999999999988887777776653
No 89
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=97.66 E-value=5.1e-05 Score=79.31 Aligned_cols=137 Identities=12% Similarity=0.111 Sum_probs=86.8
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.|++.++++.|+++|+++.++|+.....+..+.. |+... ..++.-......
T Consensus 77 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~~~------------------------ 129 (236)
T 2fea_A 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASFDN------------------------ 129 (236)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEECSS------------------------
T ss_pred CCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEEcC------------------------
Confidence 688999999999999999999999999888887776 65432 222211110000
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
.. +++..- +.....+.+.....|..+++.+......+++|||+.
T Consensus 130 ---------------~~----~~~~~~-----------------kp~p~~~~~~~~~~K~~~~~~~~~~~~~~~~vGDs~ 173 (236)
T 2fea_A 130 ---------------DY----IHIDWP-----------------HSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSV 173 (236)
T ss_dssp ---------------SB----CEEECT-----------------TCCCTTCCSCCSSCHHHHHHHHCCTTCEEEEEECCG
T ss_pred ---------------Cc----eEEecC-----------------CCCccccccccCCcHHHHHHHHhccCCeEEEEeCCh
Confidence 00 000000 000000111124468888888865667899999999
Q ss_pred cChHHhhhcCccccccCccccchhc--cCcEEecchhhhHHHH
Q 001888 679 NDVGMLQEADIGVGISGVEGMQAVM--SSDYAIAQFRFLERLL 719 (1000)
Q Consensus 679 ND~~mlk~AdvGIa~~g~e~~~ak~--~aD~vl~~f~~l~~ll 719 (1000)
+|+.|.+.||+.+...+.. ..... .+|+++.++..+..+|
T Consensus 174 ~Di~~a~~aG~~~~~~~~~-~~~~~~~~~~~~~~~~~el~~~l 215 (236)
T 2fea_A 174 TDVEAAKLSDLCFARDYLL-NECREQNLNHLPYQDFYEIRKEI 215 (236)
T ss_dssp GGHHHHHTCSEEEECHHHH-HHHHHTTCCEECCSSHHHHHHHH
T ss_pred HHHHHHHhCCeeeechHHH-HHHHHCCCCeeecCCHHHHHHHH
Confidence 9999999999988543221 11222 2789998888887763
No 90
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=97.64 E-value=4e-05 Score=81.15 Aligned_cols=41 Identities=15% Similarity=0.072 Sum_probs=36.8
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 558 (1000)
-++.+++.++++.|++.|++++++|+.....+..+.+..|+
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l 149 (259)
T 4eek_A 109 VTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGL 149 (259)
T ss_dssp CEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTC
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcCh
Confidence 45789999999999999999999999998888888888776
No 91
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=97.64 E-value=0.0001 Score=76.61 Aligned_cols=119 Identities=18% Similarity=0.167 Sum_probs=81.2
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.++++.|+ .|++++++|+.....+......+|+...-..+
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~--------------------------------- 152 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKI--------------------------------- 152 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEE---------------------------------
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeE---------------------------------
Confidence 56899999999999 99999999999888888887777764321111
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hcC---CCEEEEE
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGT---GKTTLAI 674 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~~---~~~vlai 674 (1000)
+.+.... . ..-|..+.+.+ +.. ...+++|
T Consensus 153 ---------------------~~~~~~~------------------------~--~kp~~~~~~~~~~~lgi~~~~~~~i 185 (240)
T 3qnm_A 153 ---------------------ILSEDLG------------------------V--LKPRPEIFHFALSATQSELRESLMI 185 (240)
T ss_dssp ---------------------EEGGGTT------------------------C--CTTSHHHHHHHHHHTTCCGGGEEEE
T ss_pred ---------------------EEeccCC------------------------C--CCCCHHHHHHHHHHcCCCcccEEEE
Confidence 1100000 0 11122222222 333 3579999
Q ss_pred cCCc-cChHHhhhcCccccccCccc-cchhccCcEEecchhhhHHH
Q 001888 675 GDGA-NDVGMLQEADIGVGISGVEG-MQAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 675 GDG~-ND~~mlk~AdvGIa~~g~e~-~~ak~~aD~vl~~f~~l~~l 718 (1000)
||+. ||+.|.+.||+++++.+... ......+|+++.++..+..+
T Consensus 186 GD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~sl~e~~~~ 231 (240)
T 3qnm_A 186 GDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSLKELMNL 231 (240)
T ss_dssp ESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESSTHHHHHH
T ss_pred CCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECCHHHHHHH
Confidence 9995 99999999999997744333 12567899999998888776
No 92
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=97.63 E-value=9.8e-05 Score=75.49 Aligned_cols=117 Identities=15% Similarity=0.121 Sum_probs=79.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.|++.+.++.|++ |+++.++|+.....+..+.+.+|+...-..
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~---------------------------------- 128 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDG---------------------------------- 128 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSE----------------------------------
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheee----------------------------------
Confidence 577999999999999 999999999988888888888887432111
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hcCC---CEEEEE
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAI 674 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~~~---~~vlai 674 (1000)
++++...+.-|..+.+.+ ++.| ..+++|
T Consensus 129 ------------------------------------------------i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~v 160 (210)
T 2ah5_A 129 ------------------------------------------------IYGSSPEAPHKADVIHQALQTHQLAPEQAIII 160 (210)
T ss_dssp ------------------------------------------------EEEECSSCCSHHHHHHHHHHHTTCCGGGEEEE
T ss_pred ------------------------------------------------eecCCCCCCCChHHHHHHHHHcCCCcccEEEE
Confidence 122211112233344333 4443 569999
Q ss_pred cCCccChHHhhhcCc---cccccCccccchh-ccCcEEecchhhhHHH
Q 001888 675 GDGANDVGMLQEADI---GVGISGVEGMQAV-MSSDYAIAQFRFLERL 718 (1000)
Q Consensus 675 GDG~ND~~mlk~Adv---GIa~~g~e~~~ak-~~aD~vl~~f~~l~~l 718 (1000)
||+.||+.|.+.||+ +|+.........+ ..+|+++.++..+..+
T Consensus 161 gDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el~~~ 208 (210)
T 2ah5_A 161 GDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAY 208 (210)
T ss_dssp ESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHH
T ss_pred CCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHH
Confidence 999999999999999 5554332121122 3589999988776654
No 93
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=97.58 E-value=6.2e-05 Score=78.77 Aligned_cols=125 Identities=10% Similarity=0.036 Sum_probs=75.5
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccC--ceEEEEecCCchhhHhhhhccHHHHHHHHHHHH
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQE--MKQIVITLDSPDMEALEKQGDKENITKVSLESV 595 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (1000)
.++.+++.+.++.|++.|++++++|+.....+...... |+...- ..
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~------------------------------- 154 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANL------------------------------- 154 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGG-------------------------------
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCe-------------------------------
Confidence 46789999999999999999999999877665555555 553210 00
Q ss_pred HHHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEc
Q 001888 596 TKQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIG 675 (1000)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiG 675 (1000)
++.+... -.....|+--..+.+.+.-....+++||
T Consensus 155 -----------------------~~~~~~~----------------------~~~kp~~~~~~~~~~~lg~~~~~~i~vG 189 (247)
T 3dv9_A 155 -----------------------MVTAFDV----------------------KYGKPNPEPYLMALKKGGFKPNEALVIE 189 (247)
T ss_dssp -----------------------EECGGGC----------------------SSCTTSSHHHHHHHHHHTCCGGGEEEEE
T ss_pred -----------------------EEecccC----------------------CCCCCCCHHHHHHHHHcCCChhheEEEe
Confidence 1111000 0001112222233344433335699999
Q ss_pred CCccChHHhhhcCccc-cccCcccc--c-hhccCcEEecchhhhHHHH
Q 001888 676 DGANDVGMLQEADIGV-GISGVEGM--Q-AVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 676 DG~ND~~mlk~AdvGI-a~~g~e~~--~-ak~~aD~vl~~f~~l~~ll 719 (1000)
|+.||+.|.+.||++. ++...... . ....||+++.++..+..+|
T Consensus 190 D~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~~~el~~~l 237 (247)
T 3dv9_A 190 NAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFNKNW 237 (247)
T ss_dssp CSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHHHHHHH
T ss_pred CCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECCHHHHHHHH
Confidence 9999999999999763 44322111 1 1237999999988877663
No 94
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=97.55 E-value=0.00021 Score=74.57 Aligned_cols=41 Identities=12% Similarity=0.092 Sum_probs=36.4
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
++.+++.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELD 134 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcH
Confidence 46799999999999999999999999888888888888864
No 95
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=97.54 E-value=3.6e-05 Score=78.49 Aligned_cols=122 Identities=13% Similarity=0.159 Sum_probs=78.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.+.++.|++. +++.++|+.....+..+.+.+|+...-.
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~----------------------------------- 126 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMA----------------------------------- 126 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEE-----------------------------------
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhcc-----------------------------------
Confidence 5789999999999999 9999999999888888877777632100
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
.++.+... -...-.|+--..+.+.+.-....+++|||+.
T Consensus 127 -------------------~~~~~~~~----------------------~~~KP~~~~~~~~~~~~~~~~~~~i~vGD~~ 165 (209)
T 2hdo_A 127 -------------------VTISADDT----------------------PKRKPDPLPLLTALEKVNVAPQNALFIGDSV 165 (209)
T ss_dssp -------------------EEECGGGS----------------------SCCTTSSHHHHHHHHHTTCCGGGEEEEESSH
T ss_pred -------------------EEEecCcC----------------------CCCCCCcHHHHHHHHHcCCCcccEEEECCCh
Confidence 01111000 0000112222233333332335699999999
Q ss_pred cChHHhhhcCccccccC--cc-ccchhccCcEEecchhhhHHH
Q 001888 679 NDVGMLQEADIGVGISG--VE-GMQAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 679 ND~~mlk~AdvGIa~~g--~e-~~~ak~~aD~vl~~f~~l~~l 718 (1000)
||+.|.+.||+++.+.+ .. ....+. +|+++.++..+..+
T Consensus 166 ~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~~~~el~~~ 207 (209)
T 2hdo_A 166 SDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQKPLDILEL 207 (209)
T ss_dssp HHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEESSGGGGGGG
T ss_pred hhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeCCHHHHHHh
Confidence 99999999999986532 11 122344 99999887776543
No 96
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=97.54 E-value=6.2e-05 Score=78.79 Aligned_cols=52 Identities=12% Similarity=-0.003 Sum_probs=37.8
Q ss_pred CCEEEEEcCCccChHHhhhcCccc-cccCcccc--c-hhccCcEEecchhhhHHHH
Q 001888 668 GKTTLAIGDGANDVGMLQEADIGV-GISGVEGM--Q-AVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 668 ~~~vlaiGDG~ND~~mlk~AdvGI-a~~g~e~~--~-ak~~aD~vl~~f~~l~~ll 719 (1000)
...+++|||+.||+.|.+.||++. ++...... . ....||+++.++..+..+|
T Consensus 183 ~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~s~~el~~~l 238 (243)
T 3qxg_A 183 ADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTLCDSW 238 (243)
T ss_dssp GGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEESCHHHHHHHH
T ss_pred HHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEECCHHHHHHHH
Confidence 356999999999999999999954 44322211 0 1236999999988877663
No 97
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=97.53 E-value=0.00019 Score=74.46 Aligned_cols=120 Identities=18% Similarity=0.153 Sum_probs=81.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.++++.|++. +++.++|+.....+......+|+...-..+
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~--------------------------------- 148 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDI--------------------------------- 148 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEE---------------------------------
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheE---------------------------------
Confidence 5789999999999999 999999999988888888888774321111
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hcCC----CEEEE
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG----KTTLA 673 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~~~----~~vla 673 (1000)
+.+.... . ..-|..+.+.+ +..| ..+++
T Consensus 149 ---------------------~~~~~~~------------------------~--~kp~~~~~~~~~~~~g~~~~~~~i~ 181 (238)
T 3ed5_A 149 ---------------------FVSEDTG------------------------F--QKPMKEYFNYVFERIPQFSAEHTLI 181 (238)
T ss_dssp ---------------------EEGGGTT------------------------S--CTTCHHHHHHHHHTSTTCCGGGEEE
T ss_pred ---------------------EEecccC------------------------C--CCCChHHHHHHHHHcCCCChhHeEE
Confidence 1100000 0 11122333333 4444 56999
Q ss_pred EcCCc-cChHHhhhcCccc-cccC-ccccchhccCcEEecchhhhHHHH
Q 001888 674 IGDGA-NDVGMLQEADIGV-GISG-VEGMQAVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 674 iGDG~-ND~~mlk~AdvGI-a~~g-~e~~~ak~~aD~vl~~f~~l~~ll 719 (1000)
|||+. ||+.|.+.||++. .+.. ......+..+|+++.++..+..+|
T Consensus 182 vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l 230 (238)
T 3ed5_A 182 IGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHIL 230 (238)
T ss_dssp EESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHHHH
T ss_pred ECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHHHH
Confidence 99998 9999999999964 3322 212225678999999999988874
No 98
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=97.51 E-value=0.00016 Score=75.63 Aligned_cols=40 Identities=18% Similarity=0.150 Sum_probs=35.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 558 (1000)
++.+++.++++.|+++|+++.++|+.....+..+...+|+
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l 149 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFP 149 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHST
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 4679999999999999999999999988877777777776
No 99
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=97.50 E-value=4e-05 Score=80.63 Aligned_cols=50 Identities=14% Similarity=0.141 Sum_probs=39.3
Q ss_pred CEEEEEcCCccChHHhhhcC---ccccccCccccchhccCcEEecchhhhHHHH
Q 001888 669 KTTLAIGDGANDVGMLQEAD---IGVGISGVEGMQAVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 669 ~~vlaiGDG~ND~~mlk~Ad---vGIa~~g~e~~~ak~~aD~vl~~f~~l~~ll 719 (1000)
..+++|||+.||+.|.+.|| ++|+..+.. ...+..||+++.++..+...|
T Consensus 191 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~-~~~~~~ad~v~~sl~el~~~l 243 (250)
T 3l5k_A 191 EKCLVFEDAPNGVEAALAAGMQVVMVPDGNLS-RDLTTKATLVLNSLQDFQPEL 243 (250)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEECCCTTSC-GGGSTTSSEECSCGGGCCGGG
T ss_pred ceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCc-hhhcccccEeecCHHHhhHHH
Confidence 67999999999999999999 455554433 236788999999988876553
No 100
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=97.47 E-value=0.00026 Score=76.32 Aligned_cols=57 Identities=21% Similarity=0.212 Sum_probs=45.5
Q ss_pred hHHHHHHHH-hcCC---CEEEEEcCCccChHHhhhcCccccccCccccchhccCcEEecchh
Q 001888 656 QKALVTRLV-KGTG---KTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDYAIAQFR 713 (1000)
Q Consensus 656 qK~~iV~~l-~~~~---~~vlaiGDG~ND~~mlk~AdvGIa~~g~e~~~ak~~aD~vl~~f~ 713 (1000)
.|...++.+ +..| ..++++||+.||++|++.|++||++.+.... .+..||+++.+..
T Consensus 211 ~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~-~~~~a~~v~~~~~ 271 (289)
T 3gyg_A 211 GKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQE-AKNLHNLITDSEY 271 (289)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCHH-HHHHCCCBCSSCH
T ss_pred CHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccHH-HHHhCCEEcCCCC
Confidence 588877777 5544 4699999999999999999999999665433 7788999887633
No 101
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=97.46 E-value=0.0002 Score=75.54 Aligned_cols=39 Identities=15% Similarity=0.204 Sum_probs=35.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
++.+++.++++.|+ |+++.++|+.....+..+...+|+.
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~ 131 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLT 131 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCch
Confidence 67899999999999 9999999999998888888888874
No 102
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=97.41 E-value=0.00023 Score=72.84 Aligned_cols=60 Identities=17% Similarity=0.229 Sum_probs=40.0
Q ss_pred HHHHHhcCCCEEEEEcCCccChHHhhhcCcc--cccc-Cccc-cchhccCcEEecchhhhHHHH
Q 001888 660 VTRLVKGTGKTTLAIGDGANDVGMLQEADIG--VGIS-GVEG-MQAVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 660 iV~~l~~~~~~vlaiGDG~ND~~mlk~AdvG--Ia~~-g~e~-~~ak~~aD~vl~~f~~l~~ll 719 (1000)
+.+.+.-....+++|||+.||+.|.+.||+. |++. |... ......+|+++.++..+..++
T Consensus 140 ~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~~~l 203 (211)
T 2gmw_A 140 ARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQAI 203 (211)
T ss_dssp HHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHHH
T ss_pred HHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHHHHHH
Confidence 3344432335689999999999999999965 4432 2111 112345899999988887763
No 103
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=97.39 E-value=0.00024 Score=71.90 Aligned_cols=121 Identities=15% Similarity=0.096 Sum_probs=79.2
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHH
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTK 597 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (1000)
-++.+++.+ ++.|++. +++.++|+.....+..+...+|+...-..
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 117 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKG--------------------------------- 117 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcE---------------------------------
Confidence 357799999 9999999 99999999998888888888887432111
Q ss_pred HHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCC
Q 001888 598 QIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG 677 (1000)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG 677 (1000)
++.+... -.....|+--..+.+.+. ...+++|||+
T Consensus 118 ---------------------~~~~~~~----------------------~~~Kp~~~~~~~~~~~~~--~~~~~~vGD~ 152 (201)
T 2w43_A 118 ---------------------IFSAESV----------------------KEYKPSPKVYKYFLDSIG--AKEAFLVSSN 152 (201)
T ss_dssp ---------------------EEEGGGG----------------------TCCTTCHHHHHHHHHHHT--CSCCEEEESC
T ss_pred ---------------------EEehhhc----------------------CCCCCCHHHHHHHHHhcC--CCcEEEEeCC
Confidence 1111100 000111222223333334 4678999999
Q ss_pred ccChHHhhhcCccccccC---ccccchhccCcEEecchhhhHHH
Q 001888 678 ANDVGMLQEADIGVGISG---VEGMQAVMSSDYAIAQFRFLERL 718 (1000)
Q Consensus 678 ~ND~~mlk~AdvGIa~~g---~e~~~ak~~aD~vl~~f~~l~~l 718 (1000)
.||+.|.+.||+++.+-. .........+|+++.++..+..+
T Consensus 153 ~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 196 (201)
T 2w43_A 153 AFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVNDFKELYEW 196 (201)
T ss_dssp HHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESSHHHHHHH
T ss_pred HHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEECCHHHHHHH
Confidence 999999999999875421 11111345689999988877666
No 104
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=97.35 E-value=0.00024 Score=73.54 Aligned_cols=52 Identities=10% Similarity=-0.011 Sum_probs=40.5
Q ss_pred CCEEEEEcCCc-cChHHhhhcCccccccCcc----------ccchhccCcEEecchhhhHHHH
Q 001888 668 GKTTLAIGDGA-NDVGMLQEADIGVGISGVE----------GMQAVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 668 ~~~vlaiGDG~-ND~~mlk~AdvGIa~~g~e----------~~~ak~~aD~vl~~f~~l~~ll 719 (1000)
...+++|||+. ||+.|.+.||+++.+.+.. ....+..+|+++.++..+..+|
T Consensus 172 ~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~~~l 234 (240)
T 3smv_A 172 KKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAEAH 234 (240)
T ss_dssp GGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHHHHHH
T ss_pred chhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHHHHH
Confidence 35699999996 9999999999998773322 1223578999999988877764
No 105
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=97.34 E-value=0.00022 Score=74.76 Aligned_cols=120 Identities=8% Similarity=0.011 Sum_probs=81.4
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.++++.|++. +++.++|+.....+..+...+|+.-. .
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f~--------~---------------------------- 158 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPWD--------V---------------------------- 158 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCCS--------C----------------------------
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCee--------E----------------------------
Confidence 5679999999999997 99999999998888888888776300 0
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHH-hcCC---CEEEEE
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLV-KGTG---KTTLAI 674 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l-~~~~---~~vlai 674 (1000)
++.+.. + ....| |..+++.+ +..| ..+++|
T Consensus 159 --------------------~~~~~~-----------------------~-~~~kp--~~~~~~~~~~~lgi~~~~~~~i 192 (254)
T 3umg_A 159 --------------------IIGSDI-----------------------N-RKYKP--DPQAYLRTAQVLGLHPGEVMLA 192 (254)
T ss_dssp --------------------CCCHHH-----------------------H-TCCTT--SHHHHHHHHHHTTCCGGGEEEE
T ss_pred --------------------EEEcCc-----------------------C-CCCCC--CHHHHHHHHHHcCCChHHEEEE
Confidence 000000 0 00011 12233333 3333 569999
Q ss_pred cCCccChHHhhhcCccccccCccc-------cc--hhccCcEEecchhhhHHHHHH
Q 001888 675 GDGANDVGMLQEADIGVGISGVEG-------MQ--AVMSSDYAIAQFRFLERLLLV 721 (1000)
Q Consensus 675 GDG~ND~~mlk~AdvGIa~~g~e~-------~~--ak~~aD~vl~~f~~l~~lll~ 721 (1000)
||+.||+.|.+.||+++++.+... .. .+..+|+++.++..+..+|..
T Consensus 193 GD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l~~ 248 (254)
T 3umg_A 193 AAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQLRA 248 (254)
T ss_dssp ESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHHHH
T ss_pred eCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHHHHHhcC
Confidence 999999999999999997744211 01 256789999999999888543
No 106
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=97.33 E-value=0.00022 Score=76.31 Aligned_cols=40 Identities=15% Similarity=-0.069 Sum_probs=35.0
Q ss_pred cccCCcHHHHHHHHHc-CCeEEEEcCCchhhHHHHHHHcCc
Q 001888 519 KLQKGVPECIDKLAQA-GIKVWVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~a-GIkv~mlTGD~~~ta~~ia~~~gl 558 (1000)
.+.+++.+.++.|++. |+++.++|+.....+.......|+
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l 154 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKI 154 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTC
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 4679999999999999 999999999998888777777766
No 107
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=97.30 E-value=0.00023 Score=75.53 Aligned_cols=124 Identities=11% Similarity=0.053 Sum_probs=81.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.++++.|++.|+++.++|+... .+..+...+|+...-..
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~l~~~gl~~~f~~---------------------------------- 150 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDR-RLEGILGGLGLREHFDF---------------------------------- 150 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCT-THHHHHHHTTCGGGCSC----------------------------------
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcH-HHHHHHHhCCcHHhhhE----------------------------------
Confidence 4779999999999999999999999665 45677777776432111
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
++.+... -.....|+--..+.+.+.-....+++|||+.
T Consensus 151 --------------------~~~~~~~----------------------~~~Kp~~~~~~~~~~~~g~~~~~~~~vGD~~ 188 (263)
T 3k1z_A 151 --------------------VLTSEAA----------------------GWPKPDPRIFQEALRLAHMEPVVAAHVGDNY 188 (263)
T ss_dssp --------------------EEEHHHH----------------------SSCTTSHHHHHHHHHHHTCCGGGEEEEESCH
T ss_pred --------------------EEeeccc----------------------CCCCCCHHHHHHHHHHcCCCHHHEEEECCCc
Confidence 1110000 0011123333334444433346799999997
Q ss_pred -cChHHhhhcCccccccCcccc--c---hhccCcEEecchhhhHHHH
Q 001888 679 -NDVGMLQEADIGVGISGVEGM--Q---AVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 679 -ND~~mlk~AdvGIa~~g~e~~--~---ak~~aD~vl~~f~~l~~ll 719 (1000)
||+.|.+.||+++.+.+.... . ....+|+++.++..+..+|
T Consensus 189 ~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el~~~l 235 (263)
T 3k1z_A 189 LCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLPAL 235 (263)
T ss_dssp HHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGHHHHH
T ss_pred HHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHHHHHH
Confidence 999999999999866433221 0 1236999999998888775
No 108
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=97.30 E-value=0.00024 Score=74.64 Aligned_cols=122 Identities=10% Similarity=0.061 Sum_probs=79.9
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.+++.++++.|++. ++++++|+.....+..+...+|+.- ..
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f---~~--------------------------------- 162 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPW---DM--------------------------------- 162 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCC---SE---------------------------------
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCc---ce---------------------------------
Confidence 5679999999999985 9999999998888888888777630 00
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCCc
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDGA 678 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG~ 678 (1000)
++.+... -.....|.--..+.+.+.-....|++|||+.
T Consensus 163 --------------------~~~~~~~----------------------~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~ 200 (254)
T 3umc_A 163 --------------------LLCADLF----------------------GHYKPDPQVYLGACRLLDLPPQEVMLCAAHN 200 (254)
T ss_dssp --------------------ECCHHHH----------------------TCCTTSHHHHHHHHHHHTCCGGGEEEEESCH
T ss_pred --------------------EEeeccc----------------------ccCCCCHHHHHHHHHHcCCChHHEEEEcCch
Confidence 0000000 0000111112223333322335699999999
Q ss_pred cChHHhhhcCccccccCcc---c----cch--hccCcEEecchhhhHHHH
Q 001888 679 NDVGMLQEADIGVGISGVE---G----MQA--VMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 679 ND~~mlk~AdvGIa~~g~e---~----~~a--k~~aD~vl~~f~~l~~ll 719 (1000)
||+.|.+.||+++++.+.. + ... +..+|+++.++..+..+|
T Consensus 201 ~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~l 250 (254)
T 3umc_A 201 YDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQL 250 (254)
T ss_dssp HHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHHH
T ss_pred HhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHHHHHh
Confidence 9999999999999775410 1 112 567999999998888774
No 109
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=97.27 E-value=0.00042 Score=73.66 Aligned_cols=43 Identities=9% Similarity=0.076 Sum_probs=35.3
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcC---CchhhHHHHHHHcCccc
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTG---DKMETAINIGYACSLLR 560 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTG---D~~~ta~~ia~~~gl~~ 560 (1000)
+.+-++++++|++++++|++++++|| +...........+|+..
T Consensus 21 ~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~ 66 (266)
T 3pdw_A 21 TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPA 66 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 44556899999999999999999998 66667777778888753
No 110
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=97.26 E-value=0.0011 Score=69.64 Aligned_cols=39 Identities=21% Similarity=0.187 Sum_probs=33.4
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 558 (1000)
++.+++.+.++.|+ .|+++.++|+.....+......+|+
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l 150 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGL 150 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSG
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCc
Confidence 56899999999999 9999999999887777776666665
No 111
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=97.24 E-value=0.0002 Score=73.83 Aligned_cols=52 Identities=12% Similarity=0.256 Sum_probs=39.4
Q ss_pred CCEEEEEcCCccChHHhhhcCcc-ccccCccc------cchhcc-CcEEecchhhhHHHH
Q 001888 668 GKTTLAIGDGANDVGMLQEADIG-VGISGVEG------MQAVMS-SDYAIAQFRFLERLL 719 (1000)
Q Consensus 668 ~~~vlaiGDG~ND~~mlk~AdvG-Ia~~g~e~------~~ak~~-aD~vl~~f~~l~~ll 719 (1000)
...+++|||+.||+.|.+.||++ |++.+... ...+.. ||+++.++..+..+|
T Consensus 160 ~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l 219 (229)
T 2fdr_A 160 PDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVI 219 (229)
T ss_dssp GGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHH
T ss_pred hhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHHHHHH
Confidence 35699999999999999999998 56644332 124455 999999888876653
No 112
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=97.12 E-value=0.00069 Score=71.99 Aligned_cols=44 Identities=14% Similarity=0.031 Sum_probs=36.0
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcC---CchhhHHHHHHHcCccc
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTG---DKMETAINIGYACSLLR 560 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTG---D~~~ta~~ia~~~gl~~ 560 (1000)
.+.+-++++++|++++++|++++++|| +...........+|+..
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~ 68 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEV 68 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCC
Confidence 455667899999999999999999999 66666667777788753
No 113
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=97.11 E-value=0.00065 Score=67.66 Aligned_cols=38 Identities=16% Similarity=0.326 Sum_probs=31.5
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001888 520 LQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 520 lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 558 (1000)
+.+++.+.++.|++.|++++++|+... .+......+|+
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~ 120 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSI 120 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCC
Confidence 679999999999999999999999764 45566666665
No 114
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=97.10 E-value=0.0027 Score=63.54 Aligned_cols=41 Identities=22% Similarity=0.310 Sum_probs=36.6
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCch---hhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKM---ETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~---~ta~~ia~~~gl~ 559 (1000)
++.+++.++++.|+++|+++.++|+... ..+..+...+|+.
T Consensus 34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~ 77 (189)
T 3ib6_A 34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGII 77 (189)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCG
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCch
Confidence 6889999999999999999999998876 7788888888874
No 115
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=97.10 E-value=0.00056 Score=68.44 Aligned_cols=41 Identities=22% Similarity=0.280 Sum_probs=37.4
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCc-hhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDK-METAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~-~~ta~~ia~~~gl~ 559 (1000)
++.|++.++|+.|+++|++++++||.. ...+..+.+.+|+.
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~ 109 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF 109 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH
Confidence 578999999999999999999999998 68888888888874
No 116
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=96.94 E-value=0.00078 Score=69.25 Aligned_cols=29 Identities=28% Similarity=0.235 Sum_probs=27.0
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCch
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKM 546 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~ 546 (1000)
.++.+++.++|+.|+++|+++.++||...
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~ 83 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSG 83 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHH
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCC
Confidence 46789999999999999999999999987
No 117
>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}
Probab=96.73 E-value=0.024 Score=59.63 Aligned_cols=40 Identities=15% Similarity=0.111 Sum_probs=35.5
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEc---CCchhhHHHHHHHcCcc
Q 001888 520 LQKGVPECIDKLAQAGIKVWVLT---GDKMETAINIGYACSLL 559 (1000)
Q Consensus 520 lr~~v~e~I~~l~~aGIkv~mlT---GD~~~ta~~ia~~~gl~ 559 (1000)
+-+++.++++.+++.|++++++| |+...........+|+-
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 66889999999999999999999 99988888888888774
No 118
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=96.71 E-value=0.0037 Score=66.23 Aligned_cols=42 Identities=14% Similarity=0.206 Sum_probs=36.5
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEc---CCchhhHHHHHHHcCcccc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLT---GDKMETAINIGYACSLLRQ 561 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlT---GD~~~ta~~ia~~~gl~~~ 561 (1000)
.+ ++++++|++++++|++++++| |+...........+|+...
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~ 66 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETP 66 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCC
Confidence 45 899999999999999999999 8888888888888888543
No 119
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=96.66 E-value=0.0023 Score=65.74 Aligned_cols=60 Identities=20% Similarity=0.181 Sum_probs=42.2
Q ss_pred HHHHHhcCCCEEEEEcCCc-cChHHhhhcCcccccc--CccccchhccCcEEecchhhhHHHH
Q 001888 660 VTRLVKGTGKTTLAIGDGA-NDVGMLQEADIGVGIS--GVEGMQAVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 660 iV~~l~~~~~~vlaiGDG~-ND~~mlk~AdvGIa~~--g~e~~~ak~~aD~vl~~f~~l~~ll 719 (1000)
+.+.+.-....+++|||+. ||+.|.+.||+++.+- +.........+|+++.++..+..+|
T Consensus 164 ~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~~l 226 (230)
T 3vay_A 164 ALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVL 226 (230)
T ss_dssp HHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHHHH
T ss_pred HHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHHHH
Confidence 3333333335699999998 9999999999987552 1111112567899999999888774
No 120
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=96.53 E-value=0.012 Score=62.43 Aligned_cols=49 Identities=14% Similarity=0.087 Sum_probs=41.0
Q ss_pred cceeeEEeeecccccCCcHHHHHHHHHcCCeEEEEc---CCchhhHHHHHHHcCcc
Q 001888 507 DLILLGATAVEDKLQKGVPECIDKLAQAGIKVWVLT---GDKMETAINIGYACSLL 559 (1000)
Q Consensus 507 ~l~~lG~i~i~D~lr~~v~e~I~~l~~aGIkv~mlT---GD~~~ta~~ia~~~gl~ 559 (1000)
|.|++- ..++-+++.++|++++++|++++++| |+.........+.+|+.
T Consensus 25 DGTLl~----~~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 25 DGTFYL----DDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp BTTTEE----TTEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred cCcEEe----CCEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 555553 25677999999999999999999999 88888888888888874
No 121
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=96.52 E-value=0.0064 Score=63.03 Aligned_cols=41 Identities=15% Similarity=0.138 Sum_probs=31.9
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEc---CCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLT---GDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlT---GD~~~ta~~ia~~~gl~ 559 (1000)
+.-+.+.++++.+++.|++++++| |+............|+.
T Consensus 19 ~~~~~~~~~~~~l~~~g~~~~~~t~~~g~~~~~~~~~~~~~g~~ 62 (250)
T 2c4n_A 19 VAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred EeCcCHHHHHHHHHHcCCcEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 333455889999999999999999 88877777666667763
No 122
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=96.46 E-value=0.0053 Score=64.87 Aligned_cols=124 Identities=17% Similarity=0.137 Sum_probs=79.9
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVTKQ 598 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1000)
++.|++.++++.|++ |+++.++|+.....+..+...+|+...-..+
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i--------------------------------- 166 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAI--------------------------------- 166 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEE---------------------------------
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhheE---------------------------------
Confidence 577999999999998 6999999999988888888888874321111
Q ss_pred HHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcCC-
Q 001888 599 IREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGDG- 677 (1000)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGDG- 677 (1000)
+.+... -...-.|+--..+.+.+.-....+++|||+
T Consensus 167 ---------------------~~~~~~----------------------~~~KP~p~~~~~~~~~~~~~~~~~~~vGDs~ 203 (260)
T 2gfh_A 167 ---------------------VIGGEQ----------------------KEEKPAPSIFYHCCDLLGVQPGDCVMVGDTL 203 (260)
T ss_dssp ---------------------EEGGGS----------------------SSCTTCHHHHHHHHHHHTCCGGGEEEEESCT
T ss_pred ---------------------EecCCC----------------------CCCCCCHHHHHHHHHHcCCChhhEEEECCCc
Confidence 110000 000111222223333333233569999995
Q ss_pred ccChHHhhhcCc--cccccCccc--cchhccCcEEecchhhhHHHH
Q 001888 678 ANDVGMLQEADI--GVGISGVEG--MQAVMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 678 ~ND~~mlk~Adv--GIa~~g~e~--~~ak~~aD~vl~~f~~l~~ll 719 (1000)
.||+.+-+.||+ .|++.+... ......+|+++.++..+..++
T Consensus 204 ~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~l 249 (260)
T 2gfh_A 204 ETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPALL 249 (260)
T ss_dssp TTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHHHHH
T ss_pred hhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEECCHHHHHHHH
Confidence 999999999999 566643211 113356899999988877663
No 123
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=96.44 E-value=0.0015 Score=65.70 Aligned_cols=40 Identities=13% Similarity=0.012 Sum_probs=35.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
++.+++.+.++.|++.| +++++|+.....+..+...+|+.
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~ 125 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLG 125 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGG
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHH
Confidence 36799999999999999 99999999988888888777764
No 124
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=96.41 E-value=0.0065 Score=61.78 Aligned_cols=42 Identities=21% Similarity=0.188 Sum_probs=38.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR 560 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~ 560 (1000)
++.|++.++++.|++.|+++.++|+.....+....+.+|+..
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~ 125 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK 125 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCc
Confidence 467999999999999999999999999999999988888753
No 125
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=96.38 E-value=0.0011 Score=67.31 Aligned_cols=36 Identities=11% Similarity=0.083 Sum_probs=30.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYA 555 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~ 555 (1000)
++.+++.++++.|++ |++++++|+.....+..+...
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~ 124 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSP 124 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTST
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhh
Confidence 467899999999999 999999999887766666554
No 126
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=96.34 E-value=0.00091 Score=62.63 Aligned_cols=41 Identities=12% Similarity=0.046 Sum_probs=34.9
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 558 (1000)
.++.|++.++++.|+++|+++.++|+.....+..+.+.+|+
T Consensus 17 ~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l 57 (137)
T 2pr7_A 17 DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELET 57 (137)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHH
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCCh
Confidence 35778999999999999999999999988877777666665
No 127
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=96.15 E-value=0.0094 Score=59.95 Aligned_cols=34 Identities=12% Similarity=0.184 Sum_probs=29.6
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINI 552 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~i 552 (1000)
++.+++.++++.|+++|+++.++||.....+..+
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~ 69 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPL 69 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHh
Confidence 5789999999999999999999999887766443
No 128
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=95.93 E-value=0.0086 Score=62.74 Aligned_cols=118 Identities=14% Similarity=0.218 Sum_probs=76.9
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccccCceEEEEecCCchhhHhhhhccHHHHHHHHHHHHH
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLRQEMKQIVITLDSPDMEALEKQGDKENITKVSLESVT 596 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (1000)
..++.|++.+.++.|++.|+++.+.|+.. .+..+.+.+|+...-..
T Consensus 114 ~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~-------------------------------- 159 (250)
T 4gib_A 114 SNDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDF-------------------------------- 159 (250)
T ss_dssp GGGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSE--------------------------------
T ss_pred ccccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccce--------------------------------
Confidence 34678999999999999999999887764 45566677777432111
Q ss_pred HHHHhhhhhhcccccCccceEEEEeccchHHHhhHHHHHHHHHHHhhcCceEEEcCChhhHHHHHHHHhcCCCEEEEEcC
Q 001888 597 KQIREGISQVNSAKESKVTFGLVIDGKSLDFALDKKLEKMFLDLAIDCASVICCRSSPKQKALVTRLVKGTGKTTLAIGD 676 (1000)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~~~~~~~~~~~~vi~~r~sp~qK~~iV~~l~~~~~~vlaiGD 676 (1000)
++.+... -.....|+-=..+.+.+.-....+++|||
T Consensus 160 ----------------------i~~~~~~----------------------~~~KP~p~~~~~a~~~lg~~p~e~l~VGD 195 (250)
T 4gib_A 160 ----------------------IADAGKC----------------------KNNKPHPEIFLMSAKGLNVNPQNCIGIED 195 (250)
T ss_dssp ----------------------ECCGGGC----------------------CSCTTSSHHHHHHHHHHTCCGGGEEEEES
T ss_pred ----------------------eeccccc----------------------CCCCCcHHHHHHHHHHhCCChHHeEEECC
Confidence 1111100 00122233333444444333456999999
Q ss_pred CccChHHhhhcCc-cccccCccccchhccCcEEecchhhh
Q 001888 677 GANDVGMLQEADI-GVGISGVEGMQAVMSSDYAIAQFRFL 715 (1000)
Q Consensus 677 G~ND~~mlk~Adv-GIa~~g~e~~~ak~~aD~vl~~f~~l 715 (1000)
+.+|+.+-+.||+ .|++.+.+. ...||+++.++..|
T Consensus 196 s~~Di~aA~~aG~~~i~v~~~~~---~~~ad~vi~~l~eL 232 (250)
T 4gib_A 196 ASAGIDAINSANMFSVGVGNYEN---LKKANLVVDSTNQL 232 (250)
T ss_dssp SHHHHHHHHHTTCEEEEESCTTT---TTTSSEEESSGGGC
T ss_pred CHHHHHHHHHcCCEEEEECChhH---hccCCEEECChHhC
Confidence 9999999999998 457655443 34689999988776
No 129
>2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A*
Probab=95.91 E-value=0.067 Score=52.85 Aligned_cols=53 Identities=17% Similarity=0.194 Sum_probs=36.0
Q ss_pred EEEccchhHhHHHHhccChhhHHHHHHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHh
Q 001888 424 LLCKGADSVMFERLSKHGQQFEAETRRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEK 503 (1000)
Q Consensus 424 l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 503 (1000)
-+.-|..+.|.+.-- ...+.....+.++..+|..++.+|
T Consensus 133 ~v~iGn~~~m~~~gi----~i~~~~~~~~~~~~~~G~T~V~va------------------------------------- 171 (185)
T 2kmv_A 133 KVLIGNREWMIRNGL----VINNDVNDFMTEHERKGRTAVLVA------------------------------------- 171 (185)
T ss_dssp EEEEECHHHHHHHTC----CCCHHHHHHHHHHHHTTCEEEEEE-------------------------------------
T ss_pred EEEECCHHHHHHcCC----CCCHHHHHHHHHHHhCCCeEEEEE-------------------------------------
Confidence 344588876643211 112234455677888999999999
Q ss_pred hhccceeeEEeeeccc
Q 001888 504 IERDLILLGATAVEDK 519 (1000)
Q Consensus 504 iE~~l~~lG~i~i~D~ 519 (1000)
.|-.++|++++.|+
T Consensus 172 --idg~l~g~iavaD~ 185 (185)
T 2kmv_A 172 --VDDELCGLIAIADT 185 (185)
T ss_dssp --ETTEEEEEEEEECC
T ss_pred --ECCEEEEEEEEEcC
Confidence 36789999999985
No 130
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=95.77 E-value=0.014 Score=60.81 Aligned_cols=43 Identities=7% Similarity=0.101 Sum_probs=35.8
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchh----hHHHHHHHcCcc
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKME----TAINIGYACSLL 559 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~----ta~~ia~~~gl~ 559 (1000)
+.++.|++.+.++.|+++|+++.++||++.. .+..-.+.+|+.
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFT 145 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCC
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcC
Confidence 4688999999999999999999999999764 555556667774
No 131
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=95.65 E-value=0.016 Score=64.56 Aligned_cols=42 Identities=19% Similarity=0.173 Sum_probs=37.9
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR 560 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~ 560 (1000)
++.||+.++++.|+++|+++.++|+.....+..+....|+..
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~ 256 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP 256 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGG
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChH
Confidence 577899999999999999999999999988888888888753
No 132
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=95.64 E-value=0.0011 Score=66.89 Aligned_cols=30 Identities=27% Similarity=0.308 Sum_probs=26.3
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhh
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMET 548 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~t 548 (1000)
++.+++.++++.|++.|++++++|+.....
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~ 120 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 120 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCT
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHH
Confidence 567999999999999999999999976543
No 133
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=95.55 E-value=0.013 Score=61.07 Aligned_cols=43 Identities=16% Similarity=0.087 Sum_probs=35.5
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchh----hHHHHHHHcCcc
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKME----TAINIGYACSLL 559 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~----ta~~ia~~~gl~ 559 (1000)
+.++.|++.+.++.|+++|+++.++||+... .+..-.+.+|+.
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFN 145 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCS
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcC
Confidence 5688999999999999999999999999764 455555667774
No 134
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=95.34 E-value=0.019 Score=63.38 Aligned_cols=35 Identities=20% Similarity=0.101 Sum_probs=32.6
Q ss_pred cCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHH
Q 001888 521 QKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYA 555 (1000)
Q Consensus 521 r~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~ 555 (1000)
-+++++.|+.|+++||++.++|+.+...+..+.+.
T Consensus 258 ypgv~e~L~~Lk~~Gi~laI~Snn~~~~v~~~l~~ 292 (387)
T 3nvb_A 258 FTEFQEWVKKLKNRGIIIAVCSKNNEGKAKEPFER 292 (387)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEESCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHhh
Confidence 47899999999999999999999999999999887
No 135
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=95.25 E-value=0.023 Score=58.01 Aligned_cols=40 Identities=15% Similarity=0.114 Sum_probs=34.0
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
++.+++.++++.|+++|+++.++|+... .+..+...+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~ 134 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLK 134 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCG
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcH
Confidence 5789999999999999999999999866 466777777763
No 136
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=95.03 E-value=0.0088 Score=61.52 Aligned_cols=35 Identities=11% Similarity=0.006 Sum_probs=29.8
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHH
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGY 554 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~ 554 (1000)
++.|++.++++.|++. +++.++|+.....+..+..
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~ 146 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCK 146 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHH
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHh
Confidence 3568999999999999 9999999998887776653
No 137
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=94.92 E-value=0.2 Score=52.08 Aligned_cols=62 Identities=13% Similarity=0.084 Sum_probs=40.9
Q ss_pred HHHHHHH-hcCC---CEEEEEcCCc-cChHHhhhcCccc-ccc-Ccc-ccch---hccCcEEecchhhhHHHH
Q 001888 658 ALVTRLV-KGTG---KTTLAIGDGA-NDVGMLQEADIGV-GIS-GVE-GMQA---VMSSDYAIAQFRFLERLL 719 (1000)
Q Consensus 658 ~~iV~~l-~~~~---~~vlaiGDG~-ND~~mlk~AdvGI-a~~-g~e-~~~a---k~~aD~vl~~f~~l~~ll 719 (1000)
..+.+.+ +..| ..+++|||+. ||+.|.+.||+.. .+. |.. ..+. ...+|+++.++..+..++
T Consensus 182 ~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~l 254 (259)
T 2ho4_A 182 KTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTCESFPHAVDHI 254 (259)
T ss_dssp HHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEECCHHHHHHHH
Confidence 3444444 4444 5699999998 9999999999754 332 211 1111 345899999888877663
No 138
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=94.87 E-value=0.1 Score=56.24 Aligned_cols=43 Identities=16% Similarity=0.159 Sum_probs=35.3
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEc---CCchhhHHHHHHHcCcc
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLT---GDKMETAINIGYACSLL 559 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlT---GD~~~ta~~ia~~~gl~ 559 (1000)
.+++-+++.++++.|+++|++++++| |+.........+.+|+.
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 46677899999999999999999999 57666666666777774
No 139
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=94.82 E-value=0.022 Score=61.42 Aligned_cols=32 Identities=25% Similarity=0.270 Sum_probs=28.5
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchhh
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMET 548 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~t 548 (1000)
++++.+++.++++.|+++|+++.++||.....
T Consensus 186 ~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~ 217 (301)
T 1ltq_A 186 TDVINPMVVELSKMYALMGYQIVVVSGRESGT 217 (301)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCC
T ss_pred ccCCChHHHHHHHHHHHCCCeEEEEeCCCccc
Confidence 46678999999999999999999999998653
No 140
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=94.72 E-value=0.013 Score=57.69 Aligned_cols=41 Identities=22% Similarity=0.244 Sum_probs=33.8
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCC---------------chhhHHHHHHHcCcc
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGD---------------KMETAINIGYACSLL 559 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD---------------~~~ta~~ia~~~gl~ 559 (1000)
++.|++.++|+.|+++|++++++|+. ....+..+....|+.
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 97 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ 97 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC
Confidence 57899999999999999999999997 445566666777763
No 141
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=94.56 E-value=0.059 Score=55.36 Aligned_cols=40 Identities=13% Similarity=0.153 Sum_probs=35.6
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 558 (1000)
-++.|++.++++.|+++| ++.++|+.....+..+...+|+
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl 134 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGL 134 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTH
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCc
Confidence 368899999999999999 9999999988888888877776
No 142
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=94.48 E-value=0.042 Score=57.73 Aligned_cols=43 Identities=12% Similarity=0.170 Sum_probs=33.7
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchhh---HHHHHHHcCcc
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMET---AINIGYACSLL 559 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~t---a~~ia~~~gl~ 559 (1000)
+.++-|++.++|+.|+++|+++.++||+.... +......+|+.
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 35788999999999999999999999998543 33344556664
No 143
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F
Probab=94.30 E-value=0.027 Score=50.73 Aligned_cols=46 Identities=15% Similarity=0.137 Sum_probs=37.5
Q ss_pred EEEEEEEC-----CccccC--CCCCeEEeceeecCCCeEEEEEEEecchhhHhh
Q 001888 46 FVGTLQYE-----GKQYPL--SPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQ 92 (1000)
Q Consensus 46 F~G~~~~~-----~~~~~l--~~~n~l~~Gs~l~~tg~~~g~Vv~tG~~Tki~~ 92 (1000)
.+|...+| ||+.|+ ..++.+|+||.+.+ |.+.+.|++||.+|.+.+
T Consensus 51 ~~g~~~vdeS~LTGEs~pv~k~~g~~v~aGt~~~~-G~~~~~V~~~g~~T~~~~ 103 (113)
T 2hc8_A 51 VEGESYVDESMISGEPVPVLKSKGDEVFGATINNT-GVLKIRATRVGGETLLAQ 103 (113)
T ss_dssp EECCEEEECHHHHCCSSCEEECTTCEECTTCEECS-SCEEEEEEECGGGSHHHH
T ss_pred EEceEEEEccccCCCCccEEECCCCEEEeCCEEee-ceEEEEEEEecCcCHHHH
Confidence 34555554 888887 45699999999996 999999999999997643
No 144
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=93.86 E-value=0.032 Score=60.69 Aligned_cols=41 Identities=22% Similarity=0.296 Sum_probs=37.2
Q ss_pred ecccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHc
Q 001888 516 VEDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 556 (1000)
Q Consensus 516 i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~ 556 (1000)
....+.++..+.++.|+++|++||++||-....+..+|..+
T Consensus 140 ~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 140 EPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp CCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred cccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 34467889999999999999999999999999999999875
No 145
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=93.43 E-value=0.11 Score=54.67 Aligned_cols=39 Identities=18% Similarity=0.248 Sum_probs=33.2
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHc
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 556 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~ 556 (1000)
-++.|++.++++.|+++|+++.++|+.....+..+-..+
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~ 167 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHS 167 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTB
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhh
Confidence 368899999999999999999999999887776665543
No 146
>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens}
Probab=93.12 E-value=0.03 Score=51.36 Aligned_cols=38 Identities=21% Similarity=0.348 Sum_probs=33.2
Q ss_pred CCccccCC--CCCeEEeceeecCCCeEEEEEEEecchhhHh
Q 001888 53 EGKQYPLS--PQQILLRDSKLKNTDYVYGVVVFTGHDTKVM 91 (1000)
Q Consensus 53 ~~~~~~l~--~~n~l~~Gs~l~~tg~~~g~Vv~tG~~Tki~ 91 (1000)
+||+.|+. .++.+|+||.+.+ |.+.+.|++||.+|.+.
T Consensus 75 TGEs~pv~k~~g~~v~aGt~~~~-G~~~~~v~~~g~~T~~~ 114 (124)
T 2kij_A 75 TGEAMPVAKKPGSTVIAGSINQN-GSLLICATHVGADTTLS 114 (124)
T ss_dssp TCCSSCEECCTTEEECTTCEEES-SCCEEEECSCTTTCHHH
T ss_pred cCCCccEEeCCCCEEEcCCEEee-eEEEEEEEEecccCHHH
Confidence 58888874 4699999999996 99999999999999663
No 147
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=92.28 E-value=0.28 Score=51.28 Aligned_cols=42 Identities=5% Similarity=0.142 Sum_probs=34.2
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHH----cCcc
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYA----CSLL 559 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~----~gl~ 559 (1000)
++.-+++.++++.+++.|+++.++||+...+...++.. +|+.
T Consensus 20 ~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~ 65 (264)
T 1yv9_A 20 KEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIH 65 (264)
T ss_dssp TEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCC
T ss_pred CEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCC
Confidence 34446888999999999999999999998877777665 7764
No 148
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=91.85 E-value=0.58 Score=48.91 Aligned_cols=43 Identities=23% Similarity=0.215 Sum_probs=35.2
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHH---cCcc
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYA---CSLL 559 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~---~gl~ 559 (1000)
.+.+-+++.++|+.++++|++++++||+...+...++.. +|+.
T Consensus 15 ~~~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~ 60 (263)
T 1zjj_A 15 GNRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGID 60 (263)
T ss_dssp TTEECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCC
T ss_pred CCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 344448999999999999999999999998887777665 4653
No 149
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=90.88 E-value=0.2 Score=51.76 Aligned_cols=41 Identities=20% Similarity=0.111 Sum_probs=32.6
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccc
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLLR 560 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~ 560 (1000)
.++.|++.+.++.|++.|+++.++|+... +..+-..+|+..
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~ 134 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELRE 134 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGG
T ss_pred ccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcc
Confidence 46789999999999999999999998653 445566677643
No 150
>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A
Probab=90.70 E-value=0.12 Score=52.47 Aligned_cols=29 Identities=17% Similarity=0.236 Sum_probs=25.5
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEcCCchhh
Q 001888 520 LQKGVPECIDKLAQAGIKVWVLTGDKMET 548 (1000)
Q Consensus 520 lr~~v~e~I~~l~~aGIkv~mlTGD~~~t 548 (1000)
+.+++.++++.|+++|+++.++||.....
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~ 117 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTK 117 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCS
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHH
Confidence 46789999999999999999999997543
No 151
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=89.86 E-value=0.29 Score=45.82 Aligned_cols=40 Identities=18% Similarity=0.062 Sum_probs=33.7
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEcCCc---hhhHHHHHHHcCcc
Q 001888 520 LQKGVPECIDKLAQAGIKVWVLTGDK---METAINIGYACSLL 559 (1000)
Q Consensus 520 lr~~v~e~I~~l~~aGIkv~mlTGD~---~~ta~~ia~~~gl~ 559 (1000)
+.+++.++|++|+++|++++++|||+ ...+.....+.|+.
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 45789999999999999999999998 55667777777773
No 152
>2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A
Probab=87.98 E-value=4.1 Score=39.07 Aligned_cols=16 Identities=25% Similarity=0.221 Sum_probs=14.3
Q ss_pred eCChhHHHHHHHHHHc
Q 001888 352 AESPDEAAFVIAAREV 367 (1000)
Q Consensus 352 ~~sp~e~al~~~a~~~ 367 (1000)
+.||...||+++|++.
T Consensus 36 SeHPlA~AIv~~a~~~ 51 (165)
T 2arf_A 36 SEHPLGVAVTKYCKEE 51 (165)
T ss_dssp SCSTTHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHh
Confidence 6899999999999765
No 153
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=86.74 E-value=0.22 Score=53.34 Aligned_cols=35 Identities=23% Similarity=0.252 Sum_probs=27.5
Q ss_pred cCCCcceeccccccccc---------cceeEEEEcCCCcccccee
Q 001888 210 DTDKPARARTSNLNEEL---------GQVDTILSDKTGTLTCNSM 245 (1000)
Q Consensus 210 ~~~~~~~v~~~~~~E~L---------g~v~~I~sDKTGTLT~n~m 245 (1000)
-.+.++++|+++.+|++ .++. |+||||||||+...
T Consensus 16 l~k~~v~ikd~~~~e~~i~~~~kgg~~kL~-VV~DfdgTLT~~~~ 59 (297)
T 4fe3_A 16 FQKSSVRIKNPTRVEEIICGLIKGGAAKLQ-IITDFNMTLSRFSY 59 (297)
T ss_dssp GTSTTEECSCHHHHHHHHHHHHHHHHHHEE-EEECCTTTTBCSEE
T ss_pred HhcCCeEEcChHHHHHHHHHHHhCcchhEE-EEEcCCCCceeecc
Confidence 37789999999999873 3444 67799999998654
No 154
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=81.26 E-value=1.1 Score=52.08 Aligned_cols=26 Identities=19% Similarity=0.280 Sum_probs=24.4
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCC
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGD 544 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD 544 (1000)
++.+++.++++.|+++|+++.++|+.
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~ 125 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNT 125 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCC
Confidence 67899999999999999999999996
No 155
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=80.61 E-value=1.5 Score=49.37 Aligned_cols=26 Identities=27% Similarity=0.474 Sum_probs=24.5
Q ss_pred ccCCcHHHHHHHHHcCCeEEEEcCCc
Q 001888 520 LQKGVPECIDKLAQAGIKVWVLTGDK 545 (1000)
Q Consensus 520 lr~~v~e~I~~l~~aGIkv~mlTGD~ 545 (1000)
+-+++.++|+.|+++|+++.++|+..
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~ 113 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQM 113 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECH
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCc
Confidence 67999999999999999999999965
No 156
>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}
Probab=78.35 E-value=3.8 Score=39.56 Aligned_cols=25 Identities=12% Similarity=0.315 Sum_probs=23.1
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCC
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGD 544 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD 544 (1000)
++.||+.++++.|++ ++++.++|+.
T Consensus 69 ~~~pg~~e~L~~L~~-~~~~~i~T~~ 93 (180)
T 3bwv_A 69 DVMPHAQEVVKQLNE-HYDIYIATAA 93 (180)
T ss_dssp CBCTTHHHHHHHHTT-TSEEEEEECC
T ss_pred CCCcCHHHHHHHHHh-cCCEEEEeCC
Confidence 688999999999998 4999999997
No 157
>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22
Probab=76.45 E-value=2.9 Score=43.36 Aligned_cols=35 Identities=6% Similarity=0.066 Sum_probs=28.1
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHc
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYAC 556 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~ 556 (1000)
-++.|++.++++. |+++.++|+.+...+..+-..+
T Consensus 124 ~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~ 158 (253)
T 2g80_A 124 APVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYV 158 (253)
T ss_dssp BCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSB
T ss_pred CCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhh
Confidence 3567888888877 9999999999988777766655
No 158
>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}
Probab=72.29 E-value=0.95 Score=44.99 Aligned_cols=42 Identities=12% Similarity=0.028 Sum_probs=38.3
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
.=.+||++.+.++.+++. +++++.|.-....|..+...+++-
T Consensus 66 ~v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~ 107 (195)
T 2hhl_A 66 YVLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRW 107 (195)
T ss_dssp EEEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCS
T ss_pred EEEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCc
Confidence 346899999999999998 999999999999999999998874
No 159
>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A
Probab=70.15 E-value=1.3 Score=43.45 Aligned_cols=41 Identities=10% Similarity=0.043 Sum_probs=37.7
Q ss_pred ccccCCcHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001888 518 DKLQKGVPECIDKLAQAGIKVWVLTGDKMETAINIGYACSLL 559 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 559 (1000)
=.+||++.+.++.+.+. +++.+.|.-....|..+...++.-
T Consensus 54 v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~ 94 (181)
T 2ght_A 54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKW 94 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTT
T ss_pred EEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCC
Confidence 36899999999999998 999999999999999999988764
No 160
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=67.74 E-value=2.6 Score=38.38 Aligned_cols=30 Identities=23% Similarity=0.252 Sum_probs=26.6
Q ss_pred cccCCcHHHHHHHHHcCCeEEEEcCCchhh
Q 001888 519 KLQKGVPECIDKLAQAGIKVWVLTGDKMET 548 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~aGIkv~mlTGD~~~t 548 (1000)
++.+++.++++.++++|++++++||+....
T Consensus 24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~~ 53 (126)
T 1xpj_A 24 LPRLDVIEQLREYHQLGFEIVISTARNMRT 53 (126)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTTTTT
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCChhh
Confidence 456789999999999999999999998754
No 161
>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*
Probab=59.66 E-value=2.7 Score=41.23 Aligned_cols=41 Identities=10% Similarity=0.152 Sum_probs=35.1
Q ss_pred ccccCCcHHHHHHHHHc-CCeEEEEcCCchhhHHHHHHHcCc
Q 001888 518 DKLQKGVPECIDKLAQA-GIKVWVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 518 D~lr~~v~e~I~~l~~a-GIkv~mlTGD~~~ta~~ia~~~gl 558 (1000)
-++.|++.++++.|+++ |+++.++|+.....+..+...+|+
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl 113 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW 113 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence 36789999999999999 999999999988777766666665
No 162
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=49.73 E-value=5.5 Score=39.14 Aligned_cols=40 Identities=13% Similarity=0.047 Sum_probs=33.9
Q ss_pred cccCCcHHHHHHHHHc-CCeEEEEcCCchhhHHHHHHHcCc
Q 001888 519 KLQKGVPECIDKLAQA-GIKVWVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 519 ~lr~~v~e~I~~l~~a-GIkv~mlTGD~~~ta~~ia~~~gl 558 (1000)
++.||+.++++.|++. |+++.++|+.....+..+....|+
T Consensus 75 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l 115 (197)
T 1q92_A 75 EPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAW 115 (197)
T ss_dssp CBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHH
T ss_pred CcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhch
Confidence 6789999999999999 999999999987766666655555
No 163
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=46.43 E-value=16 Score=38.10 Aligned_cols=43 Identities=19% Similarity=0.237 Sum_probs=36.0
Q ss_pred cccccCCcHHHHHHHHHcCCeEEEEcC---CchhhHHHHHHHcCcc
Q 001888 517 EDKLQKGVPECIDKLAQAGIKVWVLTG---DKMETAINIGYACSLL 559 (1000)
Q Consensus 517 ~D~lr~~v~e~I~~l~~aGIkv~mlTG---D~~~ta~~ia~~~gl~ 559 (1000)
.+++-+++.++|+.++++|++++++|| +.........+.+|+-
T Consensus 28 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~ 73 (284)
T 2hx1_A 28 YNGLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLF 73 (284)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCT
T ss_pred CCeeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcC
Confidence 456678999999999999999999996 6667777777888874
No 164
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=44.69 E-value=18 Score=39.28 Aligned_cols=47 Identities=17% Similarity=0.122 Sum_probs=36.1
Q ss_pred EEeeecccccCCcHHHHHHHHHcCCeEEEEcCCch----hhHHHHHHHcCc
Q 001888 512 GATAVEDKLQKGVPECIDKLAQAGIKVWVLTGDKM----ETAINIGYACSL 558 (1000)
Q Consensus 512 G~i~i~D~lr~~v~e~I~~l~~aGIkv~mlTGD~~----~ta~~ia~~~gl 558 (1000)
|++.-.+.+-+++.++|+.|+++|++++++|+... ..+..+.+.+|+
T Consensus 22 Gvl~~g~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi 72 (352)
T 3kc2_A 22 GVLFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDV 72 (352)
T ss_dssp TTTEETTEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTS
T ss_pred CeeEcCCeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCC
Confidence 44555667789999999999999999999998763 334455556776
No 165
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=41.42 E-value=55 Score=29.89 Aligned_cols=81 Identities=11% Similarity=0.060 Sum_probs=56.6
Q ss_pred HHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeecccccCCcHHHHHHHH
Q 001888 453 NRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLA 532 (1000)
Q Consensus 453 ~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~lr~~v~e~I~~l~ 532 (1000)
.-+...|++|+.++. ..+.+++.+- -.|.+-..+|+-+.-..-.+.+++.++.|+
T Consensus 25 ~~l~~~G~~Vi~lG~-~~p~e~~v~~------------------------a~~~~~d~v~lS~~~~~~~~~~~~~i~~l~ 79 (137)
T 1ccw_A 25 HAFTNAGFNVVNIGV-LSPQELFIKA------------------------AIETKADAILVSSLYGQGEIDCKGLRQKCD 79 (137)
T ss_dssp HHHHHTTCEEEEEEE-EECHHHHHHH------------------------HHHHTCSEEEEEECSSTHHHHHTTHHHHHH
T ss_pred HHHHHCCCEEEECCC-CCCHHHHHHH------------------------HHhcCCCEEEEEecCcCcHHHHHHHHHHHH
Confidence 356789999999986 5666654321 123577888988888887778899999999
Q ss_pred HcCC--eEEEEcCCc------hhhHHHHHHHcCc
Q 001888 533 QAGI--KVWVLTGDK------METAINIGYACSL 558 (1000)
Q Consensus 533 ~aGI--kv~mlTGD~------~~ta~~ia~~~gl 558 (1000)
++|. ..+++-|.. .......+++.|.
T Consensus 80 ~~g~~~i~v~vGG~~~~~~~~~~~~~~~~~~~G~ 113 (137)
T 1ccw_A 80 EAGLEGILLYVGGNIVVGKQHWPDVEKRFKDMGY 113 (137)
T ss_dssp HTTCTTCEEEEEESCSSSSCCHHHHHHHHHHTTC
T ss_pred hcCCCCCEEEEECCCcCchHhhhhhHHHHHHCCC
Confidence 9875 334566643 1222456788887
No 166
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=41.41 E-value=15 Score=39.52 Aligned_cols=48 Identities=17% Similarity=0.020 Sum_probs=39.1
Q ss_pred EeeecccccCCcHHHHHHHH-Hc----------CCeEEEEcCCchhhHHHHHHHcCccc
Q 001888 513 ATAVEDKLQKGVPECIDKLA-QA----------GIKVWVLTGDKMETAINIGYACSLLR 560 (1000)
Q Consensus 513 ~i~i~D~lr~~v~e~I~~l~-~a----------GIkv~mlTGD~~~ta~~ia~~~gl~~ 560 (1000)
++.+..++.+...+++.++. .+ |+.+|++|||.......++.++|+-.
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~atGr~~~~l~~~~~~~gld~ 95 (335)
T 3n28_A 37 WIVFGHYLTPAQFEDMDFFTNRFNAILDMWKVGRYEVALMDGELTSEHETILKALELDY 95 (335)
T ss_dssp EEEEESCCCHHHHHHHHHHHTSCCCEEEEEEETTEEEEEESSCCCHHHHHHHHHHTCEE
T ss_pred EEEECCCCCHHHHHHHHHHhcccccchheeecccceEEEecCCchHHHHHHHHHcCCCE
Confidence 44555667777888888888 33 89999999999999999999999744
No 167
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=29.37 E-value=2.6e+02 Score=23.74 Aligned_cols=17 Identities=12% Similarity=0.458 Sum_probs=10.8
Q ss_pred HHHHHHHHHccceEEEE
Q 001888 449 RRHINRYAEAGLRTLVI 465 (1000)
Q Consensus 449 ~~~~~~~~~~G~r~l~~ 465 (1000)
++.+.+...+|.|++.+
T Consensus 16 keivreikrqgvrvvll 32 (162)
T 2l82_A 16 KEIVREIKRQGVRVVLL 32 (162)
T ss_dssp HHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHhCCeEEEEE
Confidence 34445567788887654
No 168
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=27.24 E-value=77 Score=29.84 Aligned_cols=80 Identities=14% Similarity=0.196 Sum_probs=55.9
Q ss_pred HHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeecccccCCcHHHHHHHHH
Q 001888 454 RYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQ 533 (1000)
Q Consensus 454 ~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~lr~~v~e~I~~l~~ 533 (1000)
-+...|++|+.++.. .+.+++.+ .-.+.+-..+|+-+.-..-.+.+++.++.|++
T Consensus 41 ~l~~~G~eVi~lG~~-~p~e~lv~------------------------aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~ 95 (161)
T 2yxb_A 41 ALRDAGFEVVYTGLR-QTPEQVAM------------------------AAVQEDVDVIGVSILNGAHLHLMKRLMAKLRE 95 (161)
T ss_dssp HHHHTTCEEECCCSB-CCHHHHHH------------------------HHHHTTCSEEEEEESSSCHHHHHHHHHHHHHH
T ss_pred HHHHCCCEEEECCCC-CCHHHHHH------------------------HHHhcCCCEEEEEeechhhHHHHHHHHHHHHh
Confidence 467899999988743 45554322 11235788999999888888899999999999
Q ss_pred cCC--eEEEEcCCchhhHHHHHHHcCc
Q 001888 534 AGI--KVWVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 534 aGI--kv~mlTGD~~~ta~~ia~~~gl 558 (1000)
+|. -.+++-|-........+++.|.
T Consensus 96 ~g~~~i~v~vGG~~~~~~~~~l~~~G~ 122 (161)
T 2yxb_A 96 LGADDIPVVLGGTIPIPDLEPLRSLGI 122 (161)
T ss_dssp TTCTTSCEEEEECCCHHHHHHHHHTTC
T ss_pred cCCCCCEEEEeCCCchhcHHHHHHCCC
Confidence 884 2355567554434445677776
No 169
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=24.41 E-value=1.2e+02 Score=30.86 Aligned_cols=78 Identities=18% Similarity=0.192 Sum_probs=54.3
Q ss_pred HHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEeeecccccCCcHHHHHHHHH
Q 001888 454 RYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGATAVEDKLQKGVPECIDKLAQ 533 (1000)
Q Consensus 454 ~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i~i~D~lr~~v~e~I~~l~~ 533 (1000)
-+...|++|+.++.. ++.+++.+- -.+.+-..+|+-+.-.+-.+..++.++.|++
T Consensus 146 ~L~~~G~~Vi~LG~~-vp~e~l~~~------------------------~~~~~~d~V~lS~l~~~~~~~~~~~i~~l~~ 200 (258)
T 2i2x_B 146 LLRANGYNVVDLGRD-VPAEEVLAA------------------------VQKEKPIMLTGTALMTTTMYAFKEVNDMLLE 200 (258)
T ss_dssp HHHHTTCEEEEEEEE-CCSHHHHHH------------------------HHHHCCSEEEEECCCTTTTTHHHHHHHHHHT
T ss_pred HHHHCCCEEEECCCC-CCHHHHHHH------------------------HHHcCCCEEEEEeeccCCHHHHHHHHHHHHh
Confidence 467899999999976 565544221 1135778899999888888889999999999
Q ss_pred cCCeE-EEEcCCchhhHHHHHHHcCc
Q 001888 534 AGIKV-WVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 534 aGIkv-~mlTGD~~~ta~~ia~~~gl 558 (1000)
.|.++ +++-|-.. + ...+.++|-
T Consensus 201 ~~~~~~v~vGG~~~-~-~~~~~~iga 224 (258)
T 2i2x_B 201 NGIKIPFACGGGAV-N-QDFVSQFAL 224 (258)
T ss_dssp TTCCCCEEEESTTC-C-HHHHHTSTT
T ss_pred cCCCCcEEEECccC-C-HHHHHHcCC
Confidence 99765 44445433 3 335556653
No 170
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=24.10 E-value=63 Score=32.15 Aligned_cols=78 Identities=10% Similarity=0.086 Sum_probs=55.7
Q ss_pred HHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEE--eeecccccCCcHHHHHHH
Q 001888 454 RYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGA--TAVEDKLQKGVPECIDKL 531 (1000)
Q Consensus 454 ~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~--i~i~D~lr~~v~e~I~~l 531 (1000)
-+...|++|+.++. .++.+++.+ .-.+.+-..+|+ -++-.+-.+..++.++.|
T Consensus 115 ~l~~~G~~Vi~LG~-~vp~e~iv~------------------------~~~~~~~d~v~l~~S~l~~~~~~~~~~~i~~l 169 (215)
T 3ezx_A 115 MLGANGFQIVDLGV-DVLNENVVE------------------------EAAKHKGEKVLLVGSALMTTSMLGQKDLMDRL 169 (215)
T ss_dssp HHHHTSCEEEECCS-SCCHHHHHH------------------------HHHHTTTSCEEEEEECSSHHHHTHHHHHHHHH
T ss_pred HHHHCCCeEEEcCC-CCCHHHHHH------------------------HHHHcCCCEEEEEchhcccCcHHHHHHHHHHH
Confidence 56789999999884 556655422 112356778888 888888888899999999
Q ss_pred HHcCC--eE-EEEcCCchhhHHHHHHHcCc
Q 001888 532 AQAGI--KV-WVLTGDKMETAINIGYACSL 558 (1000)
Q Consensus 532 ~~aGI--kv-~mlTGD~~~ta~~ia~~~gl 558 (1000)
+++|. ++ +++-|.... ...|.++|-
T Consensus 170 ~~~~~~~~v~v~vGG~~~~--~~~a~~iGa 197 (215)
T 3ezx_A 170 NEEKLRDSVKCMFGGAPVS--DKWIEEIGA 197 (215)
T ss_dssp HHTTCGGGSEEEEESSSCC--HHHHHHHTC
T ss_pred HHcCCCCCCEEEEECCCCC--HHHHHHhCC
Confidence 99997 43 566665543 356777764
No 171
>1nnx_A Protein YGIW; structural genomics, hypothetical protein, OB-fold, structure 2 function project, S2F, unknown function; 1.45A {Escherichia coli} SCOP: b.40.10.1
Probab=22.44 E-value=28 Score=30.55 Aligned_cols=31 Identities=19% Similarity=0.273 Sum_probs=24.4
Q ss_pred CCCcceeccccccccccceeEEEEcCCCccc
Q 001888 211 TDKPARARTSNLNEELGQVDTILSDKTGTLT 241 (1000)
Q Consensus 211 ~~~~~~v~~~~~~E~Lg~v~~I~sDKTGTLT 241 (1000)
.+..-..-...+++.+|.=.|+|.|+||+++
T Consensus 35 ~Dd~~V~L~G~Iv~~~~~d~Y~F~D~TG~I~ 65 (109)
T 1nnx_A 35 RDDTWVTLRGNIVERISDDLYVFKDASGTIN 65 (109)
T ss_dssp CSSEEEEEEEEEEEEEETTEEEEEETTEEEE
T ss_pred cCCCeEEEEEEEEEEeCCCeEEEECCCccEE
Confidence 3333456678889999999999999999854
No 172
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=20.35 E-value=1.1e+02 Score=31.45 Aligned_cols=65 Identities=9% Similarity=0.031 Sum_probs=38.9
Q ss_pred EcCChhhHHHHHHHH----hcCCCEEEEEcCCc-cChHHhhhcCccc-ccc-Ccc-ccchh-------ccCcEEecchhh
Q 001888 650 CRSSPKQKALVTRLV----KGTGKTTLAIGDGA-NDVGMLQEADIGV-GIS-GVE-GMQAV-------MSSDYAIAQFRF 714 (1000)
Q Consensus 650 ~r~sp~qK~~iV~~l----~~~~~~vlaiGDG~-ND~~mlk~AdvGI-a~~-g~e-~~~ak-------~~aD~vl~~f~~ 714 (1000)
..-.|+-=..+.+.+ .-....+++|||+. +|+.+-+.||+.. .+. |.. ..... ..+|+++.++..
T Consensus 203 ~KP~p~~~~~a~~~l~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~~~~~~pd~~~~~l~e 282 (284)
T 2hx1_A 203 GKPDSQMFMFAYDMLRQKMEISKREILMVGDTLHTDILGGNKFGLDTALVLTGNTRIDDAETKIKSTGIVPTHICESAVI 282 (284)
T ss_dssp STTSSHHHHHHHHHHHTTSCCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSSCGGGHHHHHHHHTCCCSEEESCSCC
T ss_pred cCCCHHHHHHHHHHHhhccCCCcceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHHhhhhccCCCCCEEccchhh
Confidence 334444444445555 32335799999995 9999999998764 332 211 11122 468998877543
No 173
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=20.11 E-value=3.6e+02 Score=26.09 Aligned_cols=82 Identities=21% Similarity=0.207 Sum_probs=49.0
Q ss_pred HHHHHHHHHccceEEEEEEEccCHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHhhhccceeeEEe---eeccc-ccCCc
Q 001888 449 RRHINRYAEAGLRTLVIAYRELGEDEYRIWEKEFLKAKTSVTSDREALVASAAEKIERDLILLGAT---AVEDK-LQKGV 524 (1000)
Q Consensus 449 ~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~iE~~l~~lG~i---~i~D~-lr~~v 524 (1000)
.-..+.....|.+-+++|.-.-. --....+.+ .++.++.++ ||..| .++=-
T Consensus 33 ~la~era~e~~Ik~iVVAS~sG~------------------------TA~k~~e~~-~~i~lVvVTh~~GF~~pg~~e~~ 87 (201)
T 1vp8_A 33 RLAVERAKELGIKHLVVASSYGD------------------------TAMKALEMA-EGLEVVVVTYHTGFVREGENTMP 87 (201)
T ss_dssp HHHHHHHHHHTCCEEEEECSSSH------------------------HHHHHHHHC-TTCEEEEEECCTTSSSTTCCSSC
T ss_pred HHHHHHHHHcCCCEEEEEeCCCh------------------------HHHHHHHHh-cCCeEEEEeCcCCCCCCCCCcCC
Confidence 33444455668999999943211 011233444 567888777 56655 45556
Q ss_pred HHHHHHHHHcCCeEEEEcCCchhh--HHHHHHHcC
Q 001888 525 PECIDKLAQAGIKVWVLTGDKMET--AINIGYACS 557 (1000)
Q Consensus 525 ~e~I~~l~~aGIkv~mlTGD~~~t--a~~ia~~~g 557 (1000)
++..++|+++|++|. ||-+... -..+.++.|
T Consensus 88 ~e~~~~L~~~G~~V~--t~tH~lsgveR~is~kfG 120 (201)
T 1vp8_A 88 PEVEEELRKRGAKIV--RQSHILSGLERSISRKLG 120 (201)
T ss_dssp HHHHHHHHHTTCEEE--ECCCTTTTTHHHHHHHTC
T ss_pred HHHHHHHHhCCCEEE--EEeccccchhHHHHHhcC
Confidence 899999999999876 4444332 234555544
Done!