Query 001892
Match_columns 999
No_of_seqs 155 out of 252
Neff 4.0
Searched_HMMs 46136
Date Thu Mar 28 11:44:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001892.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001892hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd07378 MPP_ACP5 Homo sapiens 99.9 2.4E-24 5.1E-29 226.1 16.5 216 382-644 1-238 (277)
2 cd00839 MPP_PAPs purple acid p 99.9 4.6E-24 1E-28 225.3 18.0 222 379-643 2-243 (294)
3 PLN02533 probable purple acid 99.9 3.5E-23 7.5E-28 234.2 19.3 215 372-640 130-361 (427)
4 PTZ00422 glideosome-associated 99.9 2.6E-23 5.6E-28 232.6 17.1 228 377-649 22-289 (394)
5 KOG1378 Purple acid phosphatas 99.8 1.9E-20 4E-25 211.3 18.3 217 378-646 144-389 (452)
6 KOG2679 Purple (tartrate-resis 99.7 1.5E-17 3.2E-22 177.5 12.0 224 377-649 39-285 (336)
7 cd07395 MPP_CSTP1 Homo sapiens 99.7 1.3E-15 2.8E-20 159.9 19.1 178 420-640 47-237 (262)
8 cd07402 MPP_GpdQ Enterobacter 99.7 2.1E-15 4.5E-20 154.8 15.9 167 421-639 39-212 (240)
9 cd07396 MPP_Nbla03831 Homo sap 99.6 3.4E-15 7.3E-20 158.5 17.8 169 422-639 40-246 (267)
10 PRK11148 cyclic 3',5'-adenosin 99.6 5.3E-14 1.1E-18 149.8 17.2 199 378-639 11-225 (275)
11 cd07401 MPP_TMEM62_N Homo sapi 99.5 6.4E-14 1.4E-18 148.6 14.4 130 486-624 78-220 (256)
12 cd07399 MPP_YvnB Bacillus subt 99.5 2.3E-13 5E-18 140.8 13.9 159 382-619 1-166 (214)
13 cd00842 MPP_ASMase acid sphing 99.5 1.7E-13 3.7E-18 146.6 12.7 163 421-614 67-261 (296)
14 PF00149 Metallophos: Calcineu 99.4 1.3E-13 2.9E-18 124.6 6.9 193 382-614 1-200 (200)
15 cd07393 MPP_DR1119 Deinococcus 99.4 2.7E-12 5.9E-17 134.2 12.7 121 483-620 71-211 (232)
16 cd08163 MPP_Cdc1 Saccharomyces 99.3 3.5E-11 7.7E-16 128.9 14.4 118 485-620 85-234 (257)
17 COG1409 Icc Predicted phosphoh 99.3 7.7E-11 1.7E-15 122.3 15.3 151 421-614 32-193 (301)
18 PRK11340 phosphodiesterase Yae 99.2 1.6E-10 3.4E-15 124.0 16.8 197 379-649 47-262 (271)
19 cd07383 MPP_Dcr2 Saccharomyces 99.2 5.8E-11 1.2E-15 120.6 11.8 77 542-618 88-180 (199)
20 cd07392 MPP_PAE1087 Pyrobaculu 99.2 1.4E-10 3.1E-15 113.9 13.3 142 421-614 22-173 (188)
21 cd07385 MPP_YkuE_C Bacillus su 99.1 8E-10 1.7E-14 112.6 15.4 198 381-649 1-215 (223)
22 TIGR03767 P_acnes_RR metalloph 99.1 6.9E-09 1.5E-13 119.8 20.2 126 522-650 291-430 (496)
23 TIGR03729 acc_ester putative p 99.0 1.3E-09 2.7E-14 114.2 11.7 63 548-615 149-222 (239)
24 cd07388 MPP_Tt1561 Thermus the 99.0 1.7E-08 3.7E-13 106.8 16.5 174 382-613 5-190 (224)
25 cd07400 MPP_YydB Bacillus subt 98.8 2E-08 4.3E-13 96.3 8.9 49 569-618 81-129 (144)
26 cd07404 MPP_MS158 Microscilla 98.7 6.6E-08 1.4E-12 95.3 10.8 52 566-617 97-152 (166)
27 COG1408 Predicted phosphohydro 98.7 8.1E-08 1.8E-12 105.0 11.7 209 377-649 40-273 (284)
28 cd00838 MPP_superfamily metall 98.7 1.2E-07 2.6E-12 85.6 9.4 50 569-619 70-120 (131)
29 cd00840 MPP_Mre11_N Mre11 nucl 98.5 2.2E-07 4.9E-12 94.0 8.1 123 485-617 77-204 (223)
30 TIGR03768 RPA4764 metallophosp 98.5 1E-06 2.2E-11 101.7 13.1 86 524-612 294-409 (492)
31 cd07379 MPP_239FB Homo sapiens 98.5 5.2E-07 1.1E-11 86.7 8.8 47 565-614 67-116 (135)
32 cd08166 MPP_Cdc1_like_1 unchar 98.1 1.1E-05 2.4E-10 84.4 8.7 42 569-620 112-153 (195)
33 cd07384 MPP_Cdc1_like Saccharo 98.1 1.2E-05 2.7E-10 81.6 8.3 35 569-621 119-153 (171)
34 PF09423 PhoD: PhoD-like phosp 97.8 9E-05 2E-09 85.2 11.3 91 521-613 252-376 (453)
35 cd07397 MPP_DevT Myxococcus xa 97.7 0.00027 5.8E-09 76.3 12.4 58 561-618 142-212 (238)
36 cd08164 MPP_Ted1 Saccharomyces 97.7 6.1E-05 1.3E-09 78.9 6.8 32 569-618 129-160 (193)
37 cd08165 MPP_MPPE1 human MPPE1 97.7 0.00011 2.3E-09 73.7 7.4 34 569-620 107-140 (156)
38 cd07403 MPP_TTHA0053 Thermus t 97.6 0.00023 5E-09 69.0 8.7 49 567-618 57-107 (129)
39 COG2129 Predicted phosphoester 97.5 0.0027 5.8E-08 68.2 15.5 177 381-618 3-191 (226)
40 cd00845 MPP_UshA_N_like Escher 97.5 0.0041 8.8E-08 65.5 16.3 117 487-617 72-209 (252)
41 cd07406 MPP_CG11883_N Drosophi 97.4 0.0033 7.2E-08 67.5 15.4 133 487-642 73-228 (257)
42 cd00841 MPP_YfcE Escherichia c 97.4 0.0006 1.3E-08 66.5 8.5 59 565-639 74-132 (155)
43 PF12850 Metallophos_2: Calcin 97.3 0.00057 1.2E-08 65.5 7.5 60 565-639 80-139 (156)
44 PF14582 Metallophos_3: Metall 97.3 0.00048 1E-08 74.2 7.5 164 422-613 32-217 (255)
45 PRK05340 UDP-2,3-diacylglucosa 97.3 0.0016 3.4E-08 69.0 10.9 18 600-617 185-202 (241)
46 TIGR01854 lipid_A_lpxH UDP-2,3 97.3 0.0029 6.2E-08 66.8 12.4 34 600-636 183-216 (231)
47 COG1768 Predicted phosphohydro 97.2 0.0041 8.9E-08 65.2 12.6 49 564-620 157-205 (230)
48 cd07410 MPP_CpdB_N Escherichia 97.1 0.0097 2.1E-07 64.2 14.9 122 488-615 86-231 (277)
49 TIGR00040 yfcE phosphoesterase 97.1 0.0018 3.9E-08 64.0 8.4 40 565-613 77-117 (158)
50 cd07389 MPP_PhoD Bacillus subt 97.0 0.0036 7.7E-08 65.0 9.9 25 520-544 145-169 (228)
51 cd00844 MPP_Dbr1_N Dbr1 RNA la 96.9 0.014 3.1E-07 63.8 13.8 51 565-618 164-233 (262)
52 cd07411 MPP_SoxB_N Thermus the 96.8 0.023 5E-07 61.2 14.5 112 489-614 87-219 (264)
53 KOG1432 Predicted DNA repair e 96.5 0.083 1.8E-06 60.1 16.0 164 421-613 99-310 (379)
54 PHA02546 47 endonuclease subun 96.4 0.02 4.3E-07 64.3 10.9 13 485-497 77-89 (340)
55 COG0420 SbcD DNA repair exonuc 96.4 0.012 2.6E-07 66.6 9.1 52 422-501 40-92 (390)
56 cd07394 MPP_Vps29 Homo sapiens 96.2 0.024 5.2E-07 58.2 9.5 16 600-615 104-119 (178)
57 TIGR00619 sbcd exonuclease Sbc 96.2 0.017 3.8E-07 62.3 8.6 17 486-502 77-93 (253)
58 cd07409 MPP_CD73_N CD73 ecto-5 96.1 0.12 2.6E-06 56.5 14.8 117 484-615 82-219 (281)
59 KOG3770 Acid sphingomyelinase 96.1 0.041 8.9E-07 65.9 11.9 97 518-617 301-408 (577)
60 cd07408 MPP_SA0022_N Staphyloc 95.9 0.28 6.1E-06 52.8 16.2 122 484-616 70-215 (257)
61 PRK10966 exonuclease subunit S 95.8 0.01 2.2E-07 68.4 5.3 23 486-508 76-98 (407)
62 TIGR00583 mre11 DNA repair pro 95.7 0.11 2.4E-06 60.3 12.9 41 566-615 201-241 (405)
63 cd07398 MPP_YbbF-LpxH Escheric 95.5 0.018 3.8E-07 59.0 4.9 30 600-636 187-216 (217)
64 COG2908 Uncharacterized protei 95.4 0.051 1.1E-06 59.1 8.1 30 600-636 185-214 (237)
65 PRK09419 bifunctional 2',3'-cy 94.8 0.53 1.1E-05 61.2 16.3 188 380-615 659-883 (1163)
66 cd07382 MPP_DR1281 Deinococcus 94.5 1.4 2.9E-05 48.6 16.1 171 384-614 2-178 (255)
67 cd07425 MPP_Shelphs Shewanella 94.0 0.029 6.3E-07 59.0 2.0 27 420-446 30-56 (208)
68 cd07390 MPP_AQ1575 Aquifex aeo 93.7 0.065 1.4E-06 54.0 3.9 36 564-617 105-140 (168)
69 PRK04036 DNA polymerase II sma 93.3 0.083 1.8E-06 62.7 4.4 53 379-433 241-295 (504)
70 cd07391 MPP_PF1019 Pyrococcus 92.9 0.086 1.9E-06 53.3 3.3 15 421-435 40-54 (172)
71 PRK09453 phosphodiesterase; Pr 92.8 0.15 3.3E-06 51.8 4.9 38 383-434 2-39 (182)
72 cd07407 MPP_YHR202W_N Saccharo 92.8 2.4 5.1E-05 47.1 14.5 85 522-614 136-231 (282)
73 cd07405 MPP_UshA_N Escherichia 92.7 2.6 5.7E-05 46.5 14.6 50 564-615 173-222 (285)
74 cd07412 MPP_YhcR_N Bacillus su 92.7 3 6.6E-05 46.0 15.1 52 564-616 191-243 (288)
75 cd07386 MPP_DNA_pol_II_small_a 91.6 0.17 3.6E-06 53.9 3.7 18 601-618 190-207 (243)
76 COG0622 Predicted phosphoester 90.9 0.89 1.9E-05 47.3 8.0 43 563-613 78-120 (172)
77 PRK09558 ushA bifunctional UDP 90.3 3.3 7.3E-05 49.7 13.3 50 564-615 209-258 (551)
78 cd07380 MPP_CWF19_N Schizosacc 90.1 1.1 2.3E-05 45.7 7.7 49 566-617 69-126 (150)
79 COG4186 Predicted phosphoester 89.5 1.1 2.4E-05 46.7 7.3 44 562-613 104-147 (186)
80 TIGR01530 nadN NAD pyrophospha 88.8 4.5 9.6E-05 48.9 12.9 112 487-615 84-219 (550)
81 COG0737 UshA 5'-nucleotidase/2 88.7 14 0.0003 44.1 16.6 119 489-614 107-247 (517)
82 cd08162 MPP_PhoA_N Synechococc 88.3 4.9 0.00011 45.3 12.0 38 565-615 208-245 (313)
83 cd07381 MPP_CapA CapA and rela 87.9 7.5 0.00016 41.4 12.5 132 483-619 76-224 (239)
84 TIGR01390 CycNucDiestase 2',3' 87.4 6.4 0.00014 48.4 13.1 45 565-614 196-240 (626)
85 smart00854 PGA_cap Bacterial c 86.8 15 0.00033 39.3 14.1 133 484-621 73-224 (239)
86 cd07424 MPP_PrpA_PrpB PrpA and 85.7 1.1 2.3E-05 46.8 4.7 42 384-438 3-44 (207)
87 cd07387 MPP_PolD2_C PolD2 (DNA 83.6 6.2 0.00013 43.7 9.6 56 383-438 1-58 (257)
88 TIGR00024 SbcD_rel_arch putati 83.5 1.3 2.9E-05 47.6 4.4 17 421-437 57-73 (225)
89 PRK09420 cpdB bifunctional 2', 82.0 13 0.00029 46.0 12.6 45 565-614 219-263 (649)
90 COG3540 PhoD Phosphodiesterase 80.5 6.6 0.00014 47.0 8.8 44 382-439 140-185 (522)
91 PHA02239 putative protein phos 80.1 2 4.4E-05 46.5 4.3 45 383-439 2-46 (235)
92 PRK09418 bifunctional 2',3'-cy 79.7 20 0.00043 45.6 13.1 47 565-616 245-291 (780)
93 COG1311 HYS2 Archaeal DNA poly 77.4 1.8 4E-05 51.4 3.2 94 378-496 222-320 (481)
94 PRK09419 bifunctional 2',3'-cy 75.4 24 0.00051 46.5 12.6 48 565-616 235-282 (1163)
95 TIGR00282 metallophosphoestera 74.9 1.3E+02 0.0029 33.7 16.4 49 553-613 132-180 (266)
96 PRK00166 apaH diadenosine tetr 73.4 2.8 6.2E-05 46.5 3.2 19 421-439 27-45 (275)
97 COG1407 Predicted ICC-like pho 73.3 3.5 7.7E-05 45.2 3.8 86 383-496 21-109 (235)
98 PRK09968 serine/threonine-spec 70.7 2.9 6.3E-05 44.4 2.4 44 383-439 16-59 (218)
99 KOG3662 Cell division control 67.5 5 0.00011 47.2 3.6 51 421-497 92-144 (410)
100 PF09587 PGA_cap: Bacterial ca 66.8 1.1E+02 0.0024 33.1 13.3 134 483-621 74-235 (250)
101 cd07422 MPP_ApaH Escherichia c 64.3 6.1 0.00013 43.6 3.4 19 421-439 25-43 (257)
102 PF10230 DUF2305: Uncharacteri 58.9 18 0.00039 39.7 5.8 21 485-509 3-23 (266)
103 cd00144 MPP_PPP_family phospho 58.0 12 0.00027 38.7 4.1 18 421-438 23-40 (225)
104 PRK11907 bifunctional 2',3'-cy 53.8 79 0.0017 40.7 10.8 45 565-614 310-354 (814)
105 cd07423 MPP_PrpE Bacillus subt 53.3 10 0.00023 40.4 2.8 19 421-439 36-54 (234)
106 PRK11439 pphA serine/threonine 53.0 8.7 0.00019 40.7 2.1 44 383-439 18-61 (218)
107 PRK13625 bis(5'-nucleosyl)-tet 53.0 11 0.00023 40.9 2.8 51 384-439 3-53 (245)
108 cd07413 MPP_PA3087 Pseudomonas 40.9 24 0.00052 37.7 3.2 12 422-433 33-44 (222)
109 TIGR00668 apaH bis(5'-nucleosy 39.2 23 0.0005 39.9 2.8 19 421-439 27-45 (279)
110 KOG4419 5' nucleotidase [Nucle 39.2 1E+02 0.0022 38.3 8.3 125 480-617 121-274 (602)
111 PF14362 DUF4407: Domain of un 33.7 57 0.0012 36.3 4.8 99 29-145 8-107 (301)
112 cd07421 MPP_Rhilphs Rhilph pho 23.4 69 0.0015 36.8 3.2 24 421-444 33-56 (304)
113 PF07819 PGAP1: PGAP1-like pro 22.6 2.6E+02 0.0056 30.2 7.2 80 483-574 3-93 (225)
114 cd03231 ABC_CcmA_heme_exporter 22.3 1.6E+02 0.0035 30.5 5.4 41 535-576 146-186 (201)
No 1
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=99.92 E-value=2.4e-24 Score=226.12 Aligned_cols=216 Identities=19% Similarity=0.223 Sum_probs=149.2
Q ss_pred eEEEEEeecCCC-CCCchHHHHHhcCcccccccCCCCcccCCccEEEEcccccCCCCChhhhhhccccchhhhcCCCCCC
Q 001892 382 LWFDFMADTGDG-GNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPWY 460 (999)
Q Consensus 382 lwFd~VaDtGDG-~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~e~Y~~Rfv~PYe~Al~~~~~~ 460 (999)
+.|.++||+|.+ .+.+.++++.|++... .+++||+|++||++|+++...++..++.+.|+..+..
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~----------~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~---- 66 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAA----------ELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSA---- 66 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHH----------hcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccc----
Confidence 469999999987 6788889998887541 2468999999999999987655555554555544321
Q ss_pred cccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCChhHHHHHhhcccCCCcccCCCCcceEEEECCC-----cEEE
Q 001892 461 KKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQKKSYFALQLPK-----GWWV 535 (999)
Q Consensus 461 ~~e~~~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL~aF~R~F~~r~~lgGWrmpQ~~SYFAlrLP~-----~wWL 535 (999)
++ .+.| +++||||||+.++..+...+.... ..+.|.+| ..||+++.+. ++++
T Consensus 67 ------------------~~-~~~P-~~~v~GNHD~~~~~~~~~~~~~~~-~~~~~~~~--~~~y~~~~~~~~~~~~~~~ 123 (277)
T cd07378 67 ------------------PS-LQVP-WYLVLGNHDYSGNVSAQIDYTKRP-NSPRWTMP--AYYYRVSFPFPSSDTTVEF 123 (277)
T ss_pred ------------------hh-hcCC-eEEecCCcccCCCchheeehhccC-CCCCccCc--chheEEEeecCCCCCEEEE
Confidence 11 2345 999999999987755433332110 12334454 4588999874 6999
Q ss_pred EEEecCCC---------------CCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCCCcccccccccchhhHHHHHhhhh-
Q 001892 536 FGLDLALH---------------CDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYL- 599 (999)
Q Consensus 536 lGLDsql~---------------gdID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL- 599 (999)
++|||+.. +.+...|++||++.+++ . +++++||++|||.+..+..... .. .+..+++++
T Consensus 124 i~LDt~~~~~~~~~~~~~~~~~~~~~~~~Q~~wL~~~L~~-~-~~~~~iv~~H~P~~~~~~~~~~--~~-~~~~l~~l~~ 198 (277)
T cd07378 124 IMIDTVPLCGNSDDIASPYGPPNGKLAEEQLAWLEKTLAA-S-TADWKIVVGHHPIYSSGEHGPT--SC-LVDRLLPLLK 198 (277)
T ss_pred EEEeChhHcCccccccccccCcchhhHHHHHHHHHHHHHh-c-CCCeEEEEeCccceeCCCCCCc--HH-HHHHHHHHHH
Confidence 99999753 23457899999999974 2 3489999999999977543221 11 122223333
Q ss_pred CCceeEEEcCccCCcceeeecCCCCCcccceEEEecCCCCCCCCc
Q 001892 600 KGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGAFLHPT 644 (999)
Q Consensus 600 ~~RV~LvLAGHiHhYsR~~~~~~~G~~~~~~lIVsGGGGAfLHPT 644 (999)
+++|+++|+||+|.|++..+.. .+.++||+|+||+.....
T Consensus 199 ~~~v~~vl~GH~H~~~~~~~~~-----~~~~~i~~G~~~~~~~~~ 238 (277)
T cd07378 199 KYKVDAYLSGHDHNLQHIKDDG-----SGTSFVVSGAGSKARPSV 238 (277)
T ss_pred HcCCCEEEeCCcccceeeecCC-----CCcEEEEeCCCcccCCCC
Confidence 4589999999999999987553 234789999888754443
No 2
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=99.92 E-value=4.6e-24 Score=225.32 Aligned_cols=222 Identities=18% Similarity=0.242 Sum_probs=145.9
Q ss_pred CCCeEEEEEeecCC-CCCCchHHHHHhcCcccccccCCCCcccCCccEEEEcccccCCCCCh--hhhhhccccchhhhcC
Q 001892 379 KEDLWFDFMADTGD-GGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSA--FTYERRLFRPFEYALQ 455 (999)
Q Consensus 379 d~~lwFd~VaDtGD-G~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~--e~Y~~Rfv~PYe~Al~ 455 (999)
+.++.|.++||+|. +.++..++..+.++ .+++|+++++||++|..+.. ++++ .|.+..+...
T Consensus 2 ~~~~~f~v~gD~~~~~~~~~~~~~~l~~~-------------~~~~d~vl~~GDl~~~~~~~~~~~~~-~~~~~~~~~~- 66 (294)
T cd00839 2 DTPFKFAVFGDMGQNTNNSTNTLDHLEKE-------------LGNYDAILHVGDLAYADGYNNGSRWD-TFMRQIEPLA- 66 (294)
T ss_pred CCcEEEEEEEECCCCCCCcHHHHHHHHhc-------------cCCccEEEEcCchhhhcCCccchhHH-HHHHHHHHHH-
Confidence 57899999999997 45666666666554 13589999999999988764 3332 2323322111
Q ss_pred CCCCCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCChhHHH-HHhhcccC-CCcccCCCCcceEEEECCCcE
Q 001892 456 PPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFM-RFICHKSW-LGGWFMPQKKSYFALQLPKGW 533 (999)
Q Consensus 456 ~~~~~~~e~~~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL~aF~-R~F~~r~~-lgGWrmpQ~~SYFAlrLP~~w 533 (999)
. ..| ++++|||||......... +.+..+.. ...-....+..||+++.++ +
T Consensus 67 -------------------------~-~~P-~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ysf~~g~-v 118 (294)
T cd00839 67 -------------------------S-YVP-YMVTPGNHEADYNFSFYKIKAFFPRFRFPHSPSGSTSNLWYSFDVGP-V 118 (294)
T ss_pred -------------------------h-cCC-cEEcCcccccccCCCCcccccccccccccCCCCCCCCCceEEEeeCC-E
Confidence 0 235 999999999876533211 11000000 0000111334699999996 8
Q ss_pred EEEEEecCCCC---CCCHHHHHHHHHHHHhhcC-CCCeEEEEecCCCCccccccccc-chhhHHHHHhhhh-CCceeEEE
Q 001892 534 WVFGLDLALHC---DIDVYQFKFFAELVKEQVG-ERDSVIIMTHEPNWLLDWYFNNV-SGKNVKHLICDYL-KGRCKLRI 607 (999)
Q Consensus 534 WLlGLDsql~g---dID~~Q~~wFe~ll~~~v~-~~d~VIL~tHeP~w~~~~~~~~~-t~~~l~~Lle~vL-~~RV~LvL 607 (999)
.+++||++... .+...|++|+++.+++.-+ ..+++|+++|+|.|..+....+. .....+..+++++ +++|+++|
T Consensus 119 ~fi~Lds~~~~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl 198 (294)
T cd00839 119 HFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTPWIIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVL 198 (294)
T ss_pred EEEEEecccccccCCCCcHHHHHHHHHHHHhcccCCCeEEEEeccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEE
Confidence 99999998654 6778999999999874222 23689999999999876543321 1122333344555 56999999
Q ss_pred cCccCCcceeeecCCC---------CCcccceEEEecCCCCCCCC
Q 001892 608 AGDMHHYMRHSYVPSD---------GPVYVQHLLVNGCGGAFLHP 643 (999)
Q Consensus 608 AGHiHhYsR~~~~~~~---------G~~~~~~lIVsGGGGAfLHP 643 (999)
+||+|.|+|..|.... ....++.+||+|+||+-+.+
T Consensus 199 ~GH~H~y~r~~p~~~~~~~~~~~~~~~~~g~~yiv~G~~G~~~~~ 243 (294)
T cd00839 199 SGHVHAYERTCPVYNGTVVGDCNPYSNPKGPVHIVIGAGGNDEGL 243 (294)
T ss_pred EccceeeEeechhhCCEeccccccccCCCccEEEEECCCccccCc
Confidence 9999999999875321 11246689999999987764
No 3
>PLN02533 probable purple acid phosphatase
Probab=99.90 E-value=3.5e-23 Score=234.16 Aligned_cols=215 Identities=20% Similarity=0.289 Sum_probs=146.5
Q ss_pred cccccCCCCCeEEEEEeecCCCCCCchHHHHHhcCcccccccCCCCcccCCccEEEEcccccCCCCChhhhh--hccccc
Q 001892 372 LYDHLSEKEDLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYE--RRLFRP 449 (999)
Q Consensus 372 ~~~~~~~d~~lwFd~VaDtGDG~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~e~Y~--~Rfv~P 449 (999)
.|.-.+.+.++.|.++||+|.+.....+++.+. ..++|+++++||++|.+.....++ .++++|
T Consensus 130 ~F~T~p~~~~~~f~v~GDlG~~~~~~~tl~~i~---------------~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~ 194 (427)
T PLN02533 130 SFRTPPSKFPIKFAVSGDLGTSEWTKSTLEHVS---------------KWDYDVFILPGDLSYANFYQPLWDTFGRLVQP 194 (427)
T ss_pred EEECCCCCCCeEEEEEEeCCCCcccHHHHHHHH---------------hcCCCEEEEcCccccccchHHHHHHHHHHhhh
Confidence 333334457899999999998765554555442 124799999999999754322111 122233
Q ss_pred hhhhcCCCCCCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCCh----hHHHHHhhcccCCCcccCCCC----
Q 001892 450 FEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGL----NTFMRFICHKSWLGGWFMPQK---- 521 (999)
Q Consensus 450 Ye~Al~~~~~~~~e~~~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL----~aF~R~F~~r~~lgGWrmpQ~---- 521 (999)
+. . ..| ++++|||||..... ..|.. +...|.||.+
T Consensus 195 l~-----------------------------s-~~P-~m~~~GNHE~~~~~~~~~~~f~~------y~~rf~mP~~~~g~ 237 (427)
T PLN02533 195 LA-----------------------------S-QRP-WMVTHGNHELEKIPILHPEKFTA------YNARWRMPFEESGS 237 (427)
T ss_pred Hh-----------------------------h-cCc-eEEeCccccccccccccCcCccc------hhhcccCCccccCC
Confidence 31 1 235 99999999975321 11111 1234677753
Q ss_pred --cceEEEECCCcEEEEEEecCCCCCCCHHHHHHHHHHHHhhcC--CCCeEEEEecCCCCcccccccccc-hhhHHHHHh
Q 001892 522 --KSYFALQLPKGWWVFGLDLALHCDIDVYQFKFFAELVKEQVG--ERDSVIIMTHEPNWLLDWYFNNVS-GKNVKHLIC 596 (999)
Q Consensus 522 --~SYFAlrLP~~wWLlGLDsql~gdID~~Q~~wFe~ll~~~v~--~~d~VIL~tHeP~w~~~~~~~~~t-~~~l~~Lle 596 (999)
..||+++.+. +++++||+......+.+|++||++.+++ .+ ..+|+|++.|+|.|..+..+.++. ...+++.++
T Consensus 238 ~~~~yYSfd~g~-vhfI~Lds~~~~~~~~~Q~~WLe~dL~~-~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~~~r~~le 315 (427)
T PLN02533 238 TSNLYYSFNVYG-VHIIMLGSYTDFEPGSEQYQWLENNLKK-IDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESME 315 (427)
T ss_pred CCCceEEEEECC-EEEEEEeCCccccCchHHHHHHHHHHHh-hcccCCCEEEEEeCCCeeecccccCCcchhHHHHHHHH
Confidence 2599999986 8999999988777789999999999974 33 347899999999998765433221 122344455
Q ss_pred hhh-CCceeEEEcCccCCcceeeecCCCC-CcccceEEEecCCCCC
Q 001892 597 DYL-KGRCKLRIAGDMHHYMRHSYVPSDG-PVYVQHLLVNGCGGAF 640 (999)
Q Consensus 597 ~vL-~~RV~LvLAGHiHhYsR~~~~~~~G-~~~~~~lIVsGGGGAf 640 (999)
+++ +++|+++|+||+|.|+|..|..... ..+++.+||+|+||.-
T Consensus 316 ~Ll~~~~VdlvlsGH~H~YeR~~p~~~~~~~~~gpvyiv~G~gG~~ 361 (427)
T PLN02533 316 TLLYKARVDLVFAGHVHAYERFDRVYQGKTDKCGPVYITIGDGGNR 361 (427)
T ss_pred HHHHHhCCcEEEecceecccccccccCCccCCCCCEEEEeCCCccc
Confidence 665 6799999999999999998875321 1346799999999964
No 4
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=99.90 E-value=2.6e-23 Score=232.60 Aligned_cols=228 Identities=16% Similarity=0.136 Sum_probs=161.0
Q ss_pred CCCCCeEEEEEeecCCCCCCchHHHHHhcCcccccccCCCCcccCCccEEEEcccccCCCCChhhhhhccccchhhhcCC
Q 001892 377 SEKEDLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQP 456 (999)
Q Consensus 377 ~~d~~lwFd~VaDtGDG~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~e~Y~~Rfv~PYe~Al~~ 456 (999)
..++.+.|-.+||.|.|...|++||+.|++-..+ .+.||++..||+. ++|-......||.+-||.-+.+
T Consensus 22 ~~~~~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~----------~~~~FVls~GDNF-~~Gv~sv~Dp~f~~~FE~vY~~ 90 (394)
T PTZ00422 22 SVKAQLRFASLGNWGTGSKQQKLVASYLKQYAKN----------ERVTFLVSPGSNF-PGGVDGLNDPKWKHCFENVYSE 90 (394)
T ss_pred ccCCeEEEEEEecCCCCchhHHHHHHHHHHHHHh----------CCCCEEEECCccc-cCCCCCccchhHHhhHhhhccC
Confidence 4578899999999999999999999999976522 3689999999997 6776555566666666554432
Q ss_pred CCCCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCChhHHHHHhhcc----------------cCCCcccCCC
Q 001892 457 PPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICHK----------------SWLGGWFMPQ 520 (999)
Q Consensus 457 ~~~~~~e~~~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL~aF~R~F~~r----------------~~lgGWrmpQ 520 (999)
+ . ..++.| +|+++|||||..+.+++....-+. ..-.+|.||.
T Consensus 91 ~-------------s--------~~L~~P-wy~vLGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~ 148 (394)
T PTZ00422 91 E-------------S--------GDMQIP-FFTVLGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPN 148 (394)
T ss_pred c-------------c--------hhhCCC-eEEeCCcccccCCchhhhccccccccccccccccccccccccCCCccCCc
Confidence 1 1 012345 999999999998888887421110 1135799996
Q ss_pred CcceEEEE----CC------------CcEEEEEEecCCCC------CCCHHHHHHHHHHHHhhcCCCCeEEEEecCCCCc
Q 001892 521 KKSYFALQ----LP------------KGWWVFGLDLALHC------DIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWL 578 (999)
Q Consensus 521 ~~SYFAlr----LP------------~~wWLlGLDsql~g------dID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~ 578 (999)
+ ||.+. .+ ...-++.+||..-. +....|.+|+++.++.+....+|+||+.|||.|+
T Consensus 149 ~--yY~~~~~f~~~~~~~~~~~~~~~~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a~k~a~WkIVvGHhPIyS 226 (394)
T PTZ00422 149 Y--WYHYFTHFTDTSGPSLLKSGHKDMSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYAPKIADYIIVVGDKPIYS 226 (394)
T ss_pred h--hheeeeeeecccccccccccCCCCEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhhccCCCeEEEEecCceee
Confidence 5 77642 11 12678999997422 2346789999998863344468999999999999
Q ss_pred ccccccccchhhHHHHHhhhh-CCceeEEEcCccCCcceeeecCCCCCcccceEEEecCCCCCCC-CcccCCC
Q 001892 579 LDWYFNNVSGKNVKHLICDYL-KGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGAFLH-PTHVFSN 649 (999)
Q Consensus 579 ~~~~~~~~t~~~l~~Lle~vL-~~RV~LvLAGHiHhYsR~~~~~~~G~~~~~~lIVsGGGGAfLH-PTH~~~~ 649 (999)
.+.++++. .+...++++| +++|+++||||.|+|||.+.. +.++|||||||+... +++..+.
T Consensus 227 sG~hg~~~---~L~~~L~PLL~ky~VdlYisGHDH~lq~i~~~-------gt~yIvSGaGs~~~~~~~~~~~~ 289 (394)
T PTZ00422 227 SGSSKGDS---YLSYYLLPLLKDAQVDLYISGYDRNMEVLTDE-------GTAHINCGSGGNSGRKSIMKNSK 289 (394)
T ss_pred cCCCCCCH---HHHHHHHHHHHHcCcCEEEEccccceEEecCC-------CceEEEeCccccccCCCCCCCCC
Confidence 98764432 2444455666 579999999999999997532 247999999996433 4444333
No 5
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=99.85 E-value=1.9e-20 Score=211.25 Aligned_cols=217 Identities=17% Similarity=0.231 Sum_probs=158.0
Q ss_pred CCCCeEEEEEeecCCCCCCchHHHHHhcCcccccccCCCCcccCCccEEEEcccccCCCCChh-hhh--hccccchhhhc
Q 001892 378 EKEDLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAF-TYE--RRLFRPFEYAL 454 (999)
Q Consensus 378 ~d~~lwFd~VaDtGDG~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~e-~Y~--~Rfv~PYe~Al 454 (999)
++.+..+...||+|....++-+...+++.+ .+|++++.||++|..+... ..+ .|+++|..+
T Consensus 144 ~~~~~~~~i~GDlG~~~~~~s~~~~~~~~~--------------k~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As-- 207 (452)
T KOG1378|consen 144 QDSPTRAAIFGDMGCTEPYTSTLRNQEENL--------------KPDAVLHIGDLSYAMGYSNWQWDEFGRQVEPIAS-- 207 (452)
T ss_pred ccCceeEEEEccccccccccchHhHHhccc--------------CCcEEEEecchhhcCCCCccchHHHHhhhhhhhc--
Confidence 458999999999999988877777766543 4799999999999986542 222 567788743
Q ss_pred CCCCCCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCChhHHHHHhhcccCCCcccCCCCcc------eEEEE
Q 001892 455 QPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQKKS------YFALQ 528 (999)
Q Consensus 455 ~~~~~~~~e~~~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL~aF~R~F~~r~~lgGWrmpQ~~S------YFAlr 528 (999)
..| .+++.||||.---.+. |-......|.||-+.| ||+++
T Consensus 208 ----------------------------~vP-ymv~~GNHE~d~~~~~-----~F~~y~~Rf~mP~~~s~s~~~l~YSfd 253 (452)
T KOG1378|consen 208 ----------------------------YVP-YMVCSGNHEIDWPPQP-----CFVPYSARFNMPGNSSESDSNLYYSFD 253 (452)
T ss_pred ----------------------------cCc-eEEecccccccCCCcc-----cccccceeeccCCCcCCCCCceeEEEe
Confidence 235 9999999986211111 2122234578886554 99999
Q ss_pred CCCcEEEEEEecCCCCC--CCHHHHHHHHHHHHhhcCC--CCeEEEEecCCCCccccc-ccccc-hhhHHHHHhhhh-CC
Q 001892 529 LPKGWWVFGLDLALHCD--IDVYQFKFFAELVKEQVGE--RDSVIIMTHEPNWLLDWY-FNNVS-GKNVKHLICDYL-KG 601 (999)
Q Consensus 529 LP~~wWLlGLDsql~gd--ID~~Q~~wFe~ll~~~v~~--~d~VIL~tHeP~w~~~~~-~~~~t-~~~l~~Lle~vL-~~ 601 (999)
++. .++++|++..... ...+|++||++.|+ +++. .+|+|++.|.|.|.++.. +..+. ...+++-+|+.+ ++
T Consensus 254 ~G~-vhfv~lsse~~~~~~~~~~QY~WL~~dL~-~v~r~~tPWlIv~~HrP~Y~S~~~~~~reG~~~~~~~~LE~l~~~~ 331 (452)
T KOG1378|consen 254 VGG-VHFVVLSTETYYNFLKGTAQYQWLERDLA-SVDRKKTPWLIVQGHRPMYCSSNDAHYREGEFESMREGLEPLFVKY 331 (452)
T ss_pred ecc-EEEEEEeccccccccccchHHHHHHHHHH-HhcccCCCeEEEEecccceecCCchhhccCcchhhHHHHHHHHHHh
Confidence 997 7999999987643 33689999999996 4655 699999999999999772 22221 123334456666 88
Q ss_pred ceeEEEcCccCCcceeeecCCC------C-----CcccceEEEecCCCC--CCCCccc
Q 001892 602 RCKLRIAGDMHHYMRHSYVPSD------G-----PVYVQHLLVNGCGGA--FLHPTHV 646 (999)
Q Consensus 602 RV~LvLAGHiHhYsR~~~~~~~------G-----~~~~~~lIVsGGGGA--fLHPTH~ 646 (999)
+|+++|+||.|.|+|..|.... | ...+|.+|++|+||+ -+.|-..
T Consensus 332 ~VDvvf~GHvH~YER~~piyn~~~~~~~~~~~~~d~~aPvyI~~G~~G~~e~~~~~~~ 389 (452)
T KOG1378|consen 332 KVDVVFWGHVHRYERFCPIYNNTCGTGWGPVHLVDGMAPIYITVGDGGNHEHLDPFSS 389 (452)
T ss_pred ceeEEEeccceehhccchhhcceeeccCCcccccCCCCCEEEEEccCCcccccCcccC
Confidence 9999999999999999887441 2 245789999999994 4555443
No 6
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=99.73 E-value=1.5e-17 Score=177.47 Aligned_cols=224 Identities=19% Similarity=0.190 Sum_probs=153.7
Q ss_pred CCCCCeEEEEEeecC-CCCCCchHHHHHhcCcccccccCCCCcccCCccEEEEcccccCCCCChhhhhhccccchhhhcC
Q 001892 377 SEKEDLWFDFMADTG-DGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQ 455 (999)
Q Consensus 377 ~~d~~lwFd~VaDtG-DG~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~e~Y~~Rfv~PYe~Al~ 455 (999)
.+|+.+.|-+|||+| .|.-.|.+||..|+.-.. ....||++-+||+.|-+|-...+..||.+.|+..+.
T Consensus 39 ~~dgslsflvvGDwGr~g~~nqs~va~qmg~ige----------~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT 108 (336)
T KOG2679|consen 39 KSDGSLSFLVVGDWGRRGSFNQSQVALQMGEIGE----------KLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYT 108 (336)
T ss_pred CCCCceEEEEEcccccCCchhHHHHHHHHHhHHH----------hccceEEEecCCcccccCCCCCCChhHHhhhhhccc
Confidence 357899999999999 677777788888765432 235799999999999999999999999999988765
Q ss_pred CCCCCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCChhHHHHHhhcccCCCcccCCCCcceEEEECCCcEEE
Q 001892 456 PPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQKKSYFALQLPKGWWV 535 (999)
Q Consensus 456 ~~~~~~~e~~~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL~aF~R~F~~r~~lgGWrmpQ~~SYFAlrLP~~wWL 535 (999)
. |.+ +.| +|.|.||||+..+.++++.-...+. -..|.-| +|||... .. .=+
T Consensus 109 ~-------------pSL----------Qkp-Wy~vlGNHDyrGnV~AQls~~l~~~-d~RW~c~--rsf~~~a-e~-ve~ 159 (336)
T KOG2679|consen 109 A-------------PSL----------QKP-WYSVLGNHDYRGNVEAQLSPVLRKI-DKRWICP--RSFYVDA-EI-VEM 159 (336)
T ss_pred C-------------ccc----------ccc-hhhhccCccccCchhhhhhHHHHhh-ccceecc--cHHhhcc-ee-eee
Confidence 3 232 335 9999999999999999887332211 0123322 4453322 10 112
Q ss_pred EEEecCCC---------CC------------CCHHHHHHHHHHHHhhcCCCCeEEEEecCCCCcccccccc-cchhhHHH
Q 001892 536 FGLDLALH---------CD------------IDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNN-VSGKNVKH 593 (999)
Q Consensus 536 lGLDsql~---------gd------------ID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~-~t~~~l~~ 593 (999)
++.|+..- .+ +-+.|..||+..+++ ...+|+||+.|||.|+.+.+++. +..+.++.
T Consensus 160 f~v~~~~f~~d~~~~~~~~~ydw~~v~PR~~~~~~~l~~le~~L~~--S~a~wkiVvGHh~i~S~~~HG~T~eL~~~LlP 237 (336)
T KOG2679|consen 160 FFVDTTPFMDDTFTLCTDDVYDWRGVLPRVKYLRALLSWLEVALKA--SRAKWKIVVGHHPIKSAGHHGPTKELEKQLLP 237 (336)
T ss_pred eccccccchhhheecccccccccccCChHHHHHHHHHHHHHHHHHH--hhcceEEEecccceehhhccCChHHHHHHHHH
Confidence 33333211 11 113578888888865 45689999999999999876543 22344444
Q ss_pred HHhhhhCCceeEEEcCccCCcceeeecCCCCCcccceEEEecCCCCCCCCcccCCC
Q 001892 594 LICDYLKGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGAFLHPTHVFSN 649 (999)
Q Consensus 594 Lle~vL~~RV~LvLAGHiHhYsR~~~~~~~G~~~~~~lIVsGGGGAfLHPTH~~~~ 649 (999)
++++ .+|+++++||.|.-|...... ++.+++|||||---=..|+..|+
T Consensus 238 iL~~---n~VdlY~nGHDHcLQhis~~e-----~~iqf~tSGagSkaw~g~~~~~~ 285 (336)
T KOG2679|consen 238 ILEA---NGVDLYINGHDHCLQHISSPE-----SGIQFVTSGAGSKAWRGTDHNPE 285 (336)
T ss_pred HHHh---cCCcEEEecchhhhhhccCCC-----CCeeEEeeCCcccccCCCccCCc
Confidence 4444 599999999999988876332 35589999997755555566654
No 7
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=99.68 E-value=1.3e-15 Score=159.90 Aligned_cols=178 Identities=20% Similarity=0.229 Sum_probs=109.2
Q ss_pred cCCccEEEEcccccCCCCChhhhhhccccchhhhcCCCCCCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCC
Q 001892 420 LPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDG 499 (999)
Q Consensus 420 lPRgdfLVlgGDlvYP~gs~e~Y~~Rfv~PYe~Al~~~~~~~~e~~~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDG 499 (999)
.|++|+++++||++..+... ++..+..+.+...++. + . .+.++++||||||..+.
T Consensus 47 ~~~pd~ii~~GDl~~~~~~~-~~~~~~~~~~~~~~~~----------------------~-~-~~vp~~~i~GNHD~~~~ 101 (262)
T cd07395 47 NPKPKFVVVCGDLVNAMPGD-ELRERQVSDLKDVLSL----------------------L-D-PDIPLVCVCGNHDVGNT 101 (262)
T ss_pred CCCCCEEEEeCCcCCCCcch-hhHHHHHHHHHHHHhh----------------------c-c-CCCcEEEeCCCCCCCCC
Confidence 35789999999999876543 2322222334333320 0 0 12349999999998533
Q ss_pred h-hHHHHHhhcccCCCcccCCCCcceEEEECCCcEEEEEEecCCCC------CCCHHHHHHHHHHHHhhc-CCCCeEEEE
Q 001892 500 L-NTFMRFICHKSWLGGWFMPQKKSYFALQLPKGWWVFGLDLALHC------DIDVYQFKFFAELVKEQV-GERDSVIIM 571 (999)
Q Consensus 500 L-~aF~R~F~~r~~lgGWrmpQ~~SYFAlrLP~~wWLlGLDsql~g------dID~~Q~~wFe~ll~~~v-~~~d~VIL~ 571 (999)
. ....+.|.+ . ....||++..++ +++++||++... .++..|++|+++.+++.- .++.++||+
T Consensus 102 ~~~~~~~~f~~-~--------~g~~~y~~~~~~-~~~i~lds~~~~~~~~~~~~~~~ql~WL~~~L~~~~~~~~~~~iv~ 171 (262)
T cd07395 102 PTEESIKDYRD-V--------FGDDYFSFWVGG-VFFIVLNSQLFFDPSEVPELAQAQDVWLEEQLEIAKESDCKHVIVF 171 (262)
T ss_pred CChhHHHHHHH-H--------hCCcceEEEECC-EEEEEeccccccCccccccchHHHHHHHHHHHHHHHhccCCcEEEE
Confidence 2 111122211 1 112478888865 899999997532 356789999999997422 245799999
Q ss_pred ecCCCCccccccccc----chhhHHHHHhhhh-CCceeEEEcCccCCcceeeecCCCCCcccceEEEecCCCCC
Q 001892 572 THEPNWLLDWYFNNV----SGKNVKHLICDYL-KGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGAF 640 (999)
Q Consensus 572 tHeP~w~~~~~~~~~----t~~~l~~Lle~vL-~~RV~LvLAGHiHhYsR~~~~~~~G~~~~~~lIVsGGGGAf 640 (999)
+|+|.+..+....+. ...+..+ +.+++ +++|+++|+||+|.+.+.... | .+++++|+.|..
T Consensus 172 ~H~P~~~~~~~~~~~~~~~~~~~~~~-l~~ll~~~~V~~v~~GH~H~~~~~~~~---g----~~~~~~~~~~~~ 237 (262)
T cd07395 172 QHIPWFLEDPDEEDSYFNIPKSVRKP-LLDKFKKAGVKAVFSGHYHRNAGGRYG---G----LEMVVTSAIGAQ 237 (262)
T ss_pred ECcCCccCCCCCCcccCCcCHHHHHH-HHHHHHhcCceEEEECccccCCceEEC---C----EEEEEcCceecc
Confidence 999998654321111 1122222 23334 569999999999987764421 2 367888887763
No 8
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=99.65 E-value=2.1e-15 Score=154.84 Aligned_cols=167 Identities=22% Similarity=0.342 Sum_probs=107.4
Q ss_pred CCccEEEEcccccCCCCChhhhhhccccchhhhcCCCCCCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCCh
Q 001892 421 PRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGL 500 (999)
Q Consensus 421 PRgdfLVlgGDlvYP~gs~e~Y~~Rfv~PYe~Al~~~~~~~~e~~~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL 500 (999)
+++|+++++||++.. ++.++|+. +.+ .+ ++.+.| ++.||||||..+.
T Consensus 39 ~~~d~vi~~GDl~~~-~~~~~~~~-~~~----~l-------------------------~~~~~p-~~~v~GNHD~~~~- 85 (240)
T cd07402 39 PRPDLVLVTGDLTDD-GSPESYER-LRE----LL-------------------------AALPIP-VYLLPGNHDDRAA- 85 (240)
T ss_pred CCCCEEEECccCCCC-CCHHHHHH-HHH----HH-------------------------hhcCCC-EEEeCCCCCCHHH-
Confidence 578999999999975 44444432 211 11 122345 9999999998533
Q ss_pred hHHHHHhhcccCCCcccCCCCcceEEEECCCcEEEEEEecCCC----CCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCC
Q 001892 501 NTFMRFICHKSWLGGWFMPQKKSYFALQLPKGWWVFGLDLALH----CDIDVYQFKFFAELVKEQVGERDSVIIMTHEPN 576 (999)
Q Consensus 501 ~aF~R~F~~r~~lgGWrmpQ~~SYFAlrLP~~wWLlGLDsql~----gdID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~ 576 (999)
+.+++..... .....+|+++.+. +.++++|+... +.++..|++|+++.+++ . +++++|+++|+|+
T Consensus 86 --~~~~~~~~~~------~~~~~~~~~~~~~-~~~i~lds~~~~~~~~~~~~~ql~wL~~~L~~-~-~~~~~il~~H~pp 154 (240)
T cd07402 86 --MRAVFPELPP------APGFVQYVVDLGG-WRLILLDSSVPGQHGGELCAAQLDWLEAALAE-A-PDKPTLVFLHHPP 154 (240)
T ss_pred --HHHhhccccc------cccccceeEecCC-EEEEEEeCCCCCCcCCEECHHHHHHHHHHHHh-C-CCCCEEEEECCCC
Confidence 4444432211 1223467888884 89999998753 34678999999999974 2 3679999999999
Q ss_pred Ccccccc-cccchhhHHHHHhhhh-CC-ceeEEEcCccCCcceeeecCCCCCcccceEEEecCCCC
Q 001892 577 WLLDWYF-NNVSGKNVKHLICDYL-KG-RCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGA 639 (999)
Q Consensus 577 w~~~~~~-~~~t~~~l~~Lle~vL-~~-RV~LvLAGHiHhYsR~~~~~~~G~~~~~~lIVsGGGGA 639 (999)
+...... +.....+.+.+ .+.+ ++ +++++|+||+|.++..... +.+++++|+.|.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~-~~~l~~~~~v~~v~~GH~H~~~~~~~~-------g~~~~~~gs~~~ 212 (240)
T cd07402 155 FPVGIAWMDAIGLRNAEAL-AAVLARHPNVRAILCGHVHRPIDGSWG-------GIPLLTAPSTCH 212 (240)
T ss_pred ccCCchhhhhhhCCCHHHH-HHHHhcCCCeeEEEECCcCchHHeEEC-------CEEEEEcCccee
Confidence 7653211 11111122222 3333 45 8999999999987665431 236788888664
No 9
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.65 E-value=3.4e-15 Score=158.50 Aligned_cols=169 Identities=18% Similarity=0.188 Sum_probs=105.7
Q ss_pred CccEEEEcccccCCCCCh--hhhhhccccchhhhcCCCCCCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCC
Q 001892 422 RGDVLLIGGDLAYPNPSA--FTYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDG 499 (999)
Q Consensus 422 RgdfLVlgGDlvYP~gs~--e~Y~~Rfv~PYe~Al~~~~~~~~e~~~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDG 499 (999)
++|++|++||++..+... +.|+. +.+++ ++...| ++.+|||||+++.
T Consensus 40 ~~d~vv~~GDlv~~~~~~~~~~~~~-~~~~l-----------------------------~~l~~p-~~~v~GNHD~~~~ 88 (267)
T cd07396 40 SLDFVVQLGDIIDGDNARAEEALDA-VLAIL-----------------------------DRLKGP-VHHVLGNHDLYNP 88 (267)
T ss_pred CCCEEEECCCeecCCCchHHHHHHH-HHHHH-----------------------------HhcCCC-EEEecCccccccc
Confidence 489999999999654321 22322 11222 122345 9999999999766
Q ss_pred hhHHHHHhhcccCCCcccCCCCcceEEEECCCcEEEEEEecCC----------------------------------CCC
Q 001892 500 LNTFMRFICHKSWLGGWFMPQKKSYFALQLPKGWWVFGLDLAL----------------------------------HCD 545 (999)
Q Consensus 500 L~aF~R~F~~r~~lgGWrmpQ~~SYFAlrLP~~wWLlGLDsql----------------------------------~gd 545 (999)
...... . . ....+...||++... +|.+++||+.. .+.
T Consensus 89 ~~~~~~---~-~----~~~~~~~~yysf~~~-~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 159 (267)
T cd07396 89 SREYLL---L-Y----TLLGLGAPYYSFSPG-GIRFIVLDGYDISALGRPEDTPKAENADDNSNLGLYLSEPRFVDWNGG 159 (267)
T ss_pred cHhhhh---c-c----cccCCCCceEEEecC-CcEEEEEeCCccccccCCCCChhhhhHHHhchhhhhccCccceeccCc
Confidence 432211 0 0 111133458999876 69999999953 345
Q ss_pred CCHHHHHHHHHHHHhhcCCCCeEEEEecCCCCcccccccc--cchhhHHHHHhhhhCCceeEEEcCccCCcceeeecCCC
Q 001892 546 IDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNN--VSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYVPSD 623 (999)
Q Consensus 546 ID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~--~t~~~l~~Lle~vL~~RV~LvLAGHiHhYsR~~~~~~~ 623 (999)
++..|++|+++.+++..+++.++||++|||.+........ ...+.+.+++++. .+|+++|+||+|.++.... .
T Consensus 160 l~~~Ql~WL~~~L~~~~~~~~~viV~~Hhp~~~~~~~~~~~~~~~~~~~~ll~~~--~~V~~v~~GH~H~~~~~~~---~ 234 (267)
T cd07396 160 IGEEQLQWLRNELQEADANGEKVIIFSHFPLHPESTSPHGLLWNHEEVLSILRAY--GCVKACISGHDHEGGYAQR---H 234 (267)
T ss_pred CCHHHHHHHHHHHHHHHhcCCeEEEEEeccCCCCCCCccccccCHHHHHHHHHhC--CCEEEEEcCCcCCCCcccc---C
Confidence 7789999999999754345678999999999866431111 1122222333331 4899999999998864431 1
Q ss_pred CCcccceEEEecCCCC
Q 001892 624 GPVYVQHLLVNGCGGA 639 (999)
Q Consensus 624 G~~~~~~lIVsGGGGA 639 (999)
+.+++++|+=+-
T Consensus 235 ----gi~~~~~~a~~~ 246 (267)
T cd07396 235 ----GIHFLTLEGMVE 246 (267)
T ss_pred ----CeeEEEechhhc
Confidence 236788777543
No 10
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=99.57 E-value=5.3e-14 Score=149.84 Aligned_cols=199 Identities=19% Similarity=0.283 Sum_probs=114.2
Q ss_pred CCCCeEEEEEeecCC-C--------CCCchHHHHHhcCcccccccCCCCcccCCccEEEEcccccCCCCChhhhhhcccc
Q 001892 378 EKEDLWFDFMADTGD-G--------GNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFR 448 (999)
Q Consensus 378 ~d~~lwFd~VaDtGD-G--------~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~e~Y~~Rfv~ 448 (999)
+++++.|..++|+== + .++.-+..+++++-+ ...+++|++|++||++- .++.++|+. +.+
T Consensus 11 ~~~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~---------~~~~~~D~vvitGDl~~-~~~~~~~~~-~~~ 79 (275)
T PRK11148 11 GEARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIR---------AQQHEFDLIVATGDLAQ-DHSSEAYQH-FAE 79 (275)
T ss_pred CCCCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHH---------hhCCCCCEEEECCCCCC-CCCHHHHHH-HHH
Confidence 347799999999872 1 122223444443321 01356899999999987 355555543 222
Q ss_pred chhhhcCCCCCCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCChhHHHHHhhcccCCCcccCCCCcceEEEE
Q 001892 449 PFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQKKSYFALQ 528 (999)
Q Consensus 449 PYe~Al~~~~~~~~e~~~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL~aF~R~F~~r~~lgGWrmpQ~~SYFAlr 528 (999)
.+ ++++.| +++||||||.... +.+.+... ++. ..|+.+.
T Consensus 80 ~l-----------------------------~~l~~P-v~~v~GNHD~~~~---~~~~~~~~----~~~----~~~~~~~ 118 (275)
T PRK11148 80 GI-----------------------------APLRKP-CVWLPGNHDFQPA---MYSALQDA----GIS----PAKHVLI 118 (275)
T ss_pred HH-----------------------------hhcCCc-EEEeCCCCCChHH---HHHHHhhc----CCC----ccceEEe
Confidence 22 223345 9999999998644 33333221 121 1233333
Q ss_pred CCCcEEEEEEecCC----CCCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCCCcccccc-cccchhhHHHHHhhhh-CC-
Q 001892 529 LPKGWWVFGLDLAL----HCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYF-NNVSGKNVKHLICDYL-KG- 601 (999)
Q Consensus 529 LP~~wWLlGLDsql----~gdID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~-~~~t~~~l~~Lle~vL-~~- 601 (999)
..+|++++||+.. .+.++..|++|+++.+++ . +++++||+.|||+...+..+ +.....+..++ .+++ ++
T Consensus 119 -~~~~~~i~Lds~~~g~~~G~l~~~ql~wL~~~L~~-~-~~~~~vv~~hH~P~~~~~~~~d~~~l~n~~~l-~~ll~~~~ 194 (275)
T PRK11148 119 -GEHWQILLLDSQVFGVPHGELSEYQLEWLERKLAD-A-PERHTLVLLHHHPLPAGCAWLDQHSLRNAHEL-AEVLAKFP 194 (275)
T ss_pred -cCCEEEEEecCCCCCCcCCEeCHHHHHHHHHHHhh-C-CCCCeEEEEcCCCCCCCcchhhccCCCCHHHH-HHHHhcCC
Confidence 4459999999975 456788999999999974 3 34565666665544333211 11112232233 3333 43
Q ss_pred ceeEEEcCccCCcceeeecCCCCCcccceEEEecCCCC
Q 001892 602 RCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGA 639 (999)
Q Consensus 602 RV~LvLAGHiHhYsR~~~~~~~G~~~~~~lIVsGGGGA 639 (999)
+|+++|+||+|........ +..++++++.+.
T Consensus 195 ~v~~vl~GH~H~~~~~~~~-------gi~~~~~ps~~~ 225 (275)
T PRK11148 195 NVKAILCGHIHQELDLDWN-------GRRLLATPSTCV 225 (275)
T ss_pred CceEEEecccChHHhceEC-------CEEEEEcCCCcC
Confidence 7999999999985443211 225677666554
No 11
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.54 E-value=6.4e-14 Score=148.64 Aligned_cols=130 Identities=17% Similarity=0.155 Sum_probs=81.3
Q ss_pred cEEEeCCCCCCCCCh--hHHHHHhhcccCCCcccCCCCcceEE-EECCCcEEEEEEecCCC----------CCCCHHHHH
Q 001892 486 QCYIIPGNHDWFDGL--NTFMRFICHKSWLGGWFMPQKKSYFA-LQLPKGWWVFGLDLALH----------CDIDVYQFK 552 (999)
Q Consensus 486 ~vfAIPGNHDWyDGL--~aF~R~F~~r~~lgGWrmpQ~~SYFA-lrLP~~wWLlGLDsql~----------gdID~~Q~~ 552 (999)
+++.+|||||.|+-. +...+++.+ ..++.++...+|+. .+.+ ++.++|||++.. +.+++.|++
T Consensus 78 p~~~v~GNHD~~~~~~~~~~~~~~~~---y~~~~~~~~~~~~~~~~~~-~~~~I~Ldt~~~~~~~~~~~~~g~l~~~ql~ 153 (256)
T cd07401 78 KWFDIRGNHDLFNIPSLDSENNYYRK---YSATGRDGSFSFSHTTRFG-NYSFIGVDPTLFPGPKRPFNFFGSLDKKLLD 153 (256)
T ss_pred eEEEeCCCCCcCCCCCccchhhHHHH---hheecCCCccceEEEecCC-CEEEEEEcCccCCCCCCCCceeccCCHHHHH
Confidence 499999999997321 122222211 11222222222222 2334 599999999742 567899999
Q ss_pred HHHHHHHhhcCCCCeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCCcceeeecCCCC
Q 001892 553 FFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYVPSDG 624 (999)
Q Consensus 553 wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHhYsR~~~~~~~G 624 (999)
|+++.+++ .++++++||++|+|.+....... .....+.++++ +++|+++|+||+|.+++-.|....|
T Consensus 154 wL~~~L~~-~~~~~~~IV~~HhP~~~~~~~~~-~~~~~~~~ll~---~~~v~~vl~GH~H~~~~~~p~h~~~ 220 (256)
T cd07401 154 RLEKELEK-STNSNYTIWFGHYPTSTIISPSA-KSSSKFKDLLK---KYNVTAYLCGHLHPLGGLEPVHYAG 220 (256)
T ss_pred HHHHHHHh-cccCCeEEEEEcccchhccCCCc-chhHHHHHHHH---hcCCcEEEeCCccCCCcceeeeecC
Confidence 99998864 45567999999999865432111 11112333334 4589999999999999867765444
No 12
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=99.49 E-value=2.3e-13 Score=140.79 Aligned_cols=159 Identities=16% Similarity=0.152 Sum_probs=95.7
Q ss_pred eEEEEEeecCCCCCCchH-HHHHhcCcccccccCCCCcccCCccEEEEcccccCCCCChhhhhhccccchhhhcCCCCCC
Q 001892 382 LWFDFMADTGDGGNSSYS-VARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPWY 460 (999)
Q Consensus 382 lwFd~VaDtGDG~dStYa-VA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~e~Y~~Rfv~PYe~Al~~~~~~ 460 (999)
+.|.+++||--+....-. ....+.+- ++. ....++|+++++||++..+...++|..-. +-++
T Consensus 1 f~~~~~~D~q~~~~~~~~~~~~~~~~i-~~~------~~~~~~d~iv~~GDl~~~~~~~~~~~~~~-~~~~--------- 63 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEVFDAQTDWI-VDN------AEALNIAFVLHLGDIVDDGDNDAEWEAAD-KAFA--------- 63 (214)
T ss_pred CEEEEecCCCcCCcCCHHHHHHHHHHH-HHH------HHHcCCCEEEECCCccCCCCCHHHHHHHH-HHHH---------
Confidence 467889998755432222 11111110 000 11245899999999998655444453211 1111
Q ss_pred cccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCChhHHHHHhhcccCCCcccCCCCcceEEEECCCcEEEEEEec
Q 001892 461 KKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQKKSYFALQLPKGWWVFGLDL 540 (999)
Q Consensus 461 ~~e~~~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL~aF~R~F~~r~~lgGWrmpQ~~SYFAlrLP~~wWLlGLDs 540 (999)
++++...| ++++||||| .++++|+
T Consensus 64 -----------------~l~~~~~p-~~~~~GNHD--------------------------------------~~~~ld~ 87 (214)
T cd07399 64 -----------------RLDKAGIP-YSVLAGNHD--------------------------------------LVLALEF 87 (214)
T ss_pred -----------------HHHHcCCc-EEEECCCCc--------------------------------------chhhCCC
Confidence 11111234 999999999 1344443
Q ss_pred CCCCCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCCCccccccccc----chhhHHHHHhhhh-CC-ceeEEEcCccCCc
Q 001892 541 ALHCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNV----SGKNVKHLICDYL-KG-RCKLRIAGDMHHY 614 (999)
Q Consensus 541 ql~gdID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~----t~~~l~~Lle~vL-~~-RV~LvLAGHiHhY 614 (999)
.++..|++|+++++++ .++.++|+++|||.+..+...+.. ...+.+..+++++ ++ +|+++|+||+|.+
T Consensus 88 ----~~~~~ql~WL~~~L~~--~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~ 161 (214)
T cd07399 88 ----GPRDEVLQWANEVLKK--HPDRPAILTTHAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGA 161 (214)
T ss_pred ----CCCHHHHHHHHHHHHH--CCCCCEEEEecccccCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCC
Confidence 3568999999999974 446799999999999665432211 1123333455656 44 7999999999998
Q ss_pred ceeee
Q 001892 615 MRHSY 619 (999)
Q Consensus 615 sR~~~ 619 (999)
.+-..
T Consensus 162 ~~~~~ 166 (214)
T cd07399 162 GRTTL 166 (214)
T ss_pred ceEEE
Confidence 77665
No 13
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=99.49 E-value=1.7e-13 Score=146.59 Aligned_cols=163 Identities=20% Similarity=0.248 Sum_probs=102.3
Q ss_pred CCccEEEEcccccCCCCChhhhh-------hccccchhhhcCCCCCCcccccccCCCCCCCCCcccccCCCCcEEEeCCC
Q 001892 421 PRGDVLLIGGDLAYPNPSAFTYE-------RRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGN 493 (999)
Q Consensus 421 PRgdfLVlgGDlvYP~gs~e~Y~-------~Rfv~PYe~Al~~~~~~~~e~~~~~kpe~p~~~~~l~~~~gP~vfAIPGN 493 (999)
+++|++|++||++......+..+ ..+.+.++... +..++++++||
T Consensus 67 ~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~----------------------------~~~pv~~~~GN 118 (296)
T cd00842 67 PKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAF----------------------------PDTPVYPALGN 118 (296)
T ss_pred CCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhC----------------------------CCCCEEEcCCC
Confidence 67899999999999875432221 22222222211 22349999999
Q ss_pred CCCCCC--------hhHH----HHHhhcccCC--CcccCCCCcceEEEECCCcEEEEEEecCCCC-----------CCCH
Q 001892 494 HDWFDG--------LNTF----MRFICHKSWL--GGWFMPQKKSYFALQLPKGWWVFGLDLALHC-----------DIDV 548 (999)
Q Consensus 494 HDWyDG--------L~aF----~R~F~~r~~l--gGWrmpQ~~SYFAlrLP~~wWLlGLDsql~g-----------dID~ 548 (999)
||.+.. .+.+ ...+.. |+ .+..+-.+..||+..+..++++++||++... ....
T Consensus 119 HD~~p~~~~~~~~~~~~~~~~~~~~w~~--~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~ 196 (296)
T cd00842 119 HDSYPVNQFPPNNSPSWLYDALAELWKS--WLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPA 196 (296)
T ss_pred CCCCcccccCCcccccHHHHHHHHHHHh--hcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHH
Confidence 998743 1111 111111 11 0111223567999997777999999997421 2236
Q ss_pred HHHHHHHHHHHhhcCCCCeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCCc
Q 001892 549 YQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHY 614 (999)
Q Consensus 549 ~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHhY 614 (999)
.|++||++++++..+.+.+|||++|+|.............+...++++++ +..|...|+||+|..
T Consensus 197 ~Ql~WL~~~L~~a~~~~~~v~I~~HiPp~~~~~~~~~~~~~~~~~ii~~y-~~~i~~~~~GH~H~d 261 (296)
T cd00842 197 GQLQWLEDELQEAEQAGEKVWIIGHIPPGVNSYDTLENWSERYLQIINRY-SDTIAGQFFGHTHRD 261 (296)
T ss_pred HHHHHHHHHHHHHHHCCCeEEEEeccCCCCcccccchHHHHHHHHHHHHH-HHhhheeeecccccc
Confidence 89999999998644556899999999998764321111234455566665 444889999999964
No 14
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.44 E-value=1.3e-13 Score=124.60 Aligned_cols=193 Identities=16% Similarity=0.184 Sum_probs=95.2
Q ss_pred eEEEEEeecCCCCCCchHHHHHhcCcccccccCCCCcccCCccEEEEcccccCCCCChhhhhhccccchhhhcCCCCCCc
Q 001892 382 LWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPWYK 461 (999)
Q Consensus 382 lwFd~VaDtGDG~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~e~Y~~Rfv~PYe~Al~~~~~~~ 461 (999)
+.|.+++|+.-+............+.. ..+++|++|++||+++.+...+.....+. .....
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~----------~~~~~d~ii~~GD~~~~~~~~~~~~~~~~-~~~~~-------- 61 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIA----------AENKPDFIIFLGDLVDGGNPSEEWRAQFW-FFIRL-------- 61 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHH----------HHTTTSEEEEESTSSSSSSHHHHHHHHHH-HHHHH--------
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHh----------ccCCCCEEEeeccccccccccccchhhhc-cchhh--------
Confidence 468899999866554421111111111 13568999999999998765544443331 01000
Q ss_pred ccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCChhHHHHHhhc-ccC--CC-cccCCCCcceEEEECCCcEEEEE
Q 001892 462 KDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICH-KSW--LG-GWFMPQKKSYFALQLPKGWWVFG 537 (999)
Q Consensus 462 ~e~~~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL~aF~R~F~~-r~~--lg-GWrmpQ~~SYFAlrLP~~wWLlG 537 (999)
.. ...+++.++||||++.+.......... ... .. ++...++. ......... +...
T Consensus 62 ------------------~~-~~~~~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~ 120 (200)
T PF00149_consen 62 ------------------LN-PKIPVYFILGNHDYYSGNSFYGFYDYQFEDYYGNYNYYYSYFNN-KVIFDNDNF-WFNS 120 (200)
T ss_dssp ------------------HH-TTTTEEEEE-TTSSHHHHHHHHHHHHHHSSEEECSSEEECTESS-EEEEEETTE-EEEE
T ss_pred ------------------hh-ccccccccccccccceeccccccccccccccccccccccccCcc-eeeeccccc-cccc
Confidence 11 223499999999998654432222111 110 00 01111111 012222221 2222
Q ss_pred EecCCCCCCC-HHHHHHHHHHHHhhcCCCCeEEEEecCCCCccccccccc-chhhHHHHHhhhh-CCceeEEEcCccCCc
Q 001892 538 LDLALHCDID-VYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNV-SGKNVKHLICDYL-KGRCKLRIAGDMHHY 614 (999)
Q Consensus 538 LDsql~gdID-~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~-t~~~l~~Lle~vL-~~RV~LvLAGHiHhY 614 (999)
.+........ ..|..|..........+.+++|+++|+|.+......... ........++..+ +.+|+++++||+|.|
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 121 GNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp HCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred ccccccccccccchhcccccccccccccccceeEEEecCCCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 2211111112 233333333333334557899999999999885543211 0111222223333 569999999999976
No 15
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=99.38 E-value=2.7e-12 Score=134.24 Aligned_cols=121 Identities=15% Similarity=0.099 Sum_probs=73.6
Q ss_pred CCCcEEEeCCCCCCCC-ChhHHHHHhhcccCCCcccCCCCcceEEEECCCcEEEEEEecCCC-----------------C
Q 001892 483 DGPQCYIIPGNHDWFD-GLNTFMRFICHKSWLGGWFMPQKKSYFALQLPKGWWVFGLDLALH-----------------C 544 (999)
Q Consensus 483 ~gP~vfAIPGNHDWyD-GL~aF~R~F~~r~~lgGWrmpQ~~SYFAlrLP~~wWLlGLDsql~-----------------g 544 (999)
++| +|+||||||+|. +.+.+.+.+.+ .++....+ .++.++. +.|+|++.... +
T Consensus 71 ~~~-v~~V~GNHD~~~~~~~~~~~~l~~----~~~~~~~n---~~~~~~~-i~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 141 (232)
T cd07393 71 PGT-KVLLKGNHDYWWGSASKLRKALEE----SRLALLFN---NAYIDDD-VAICGTRGWDNPGNPWPPINETLKVEEDE 141 (232)
T ss_pred CCC-eEEEeCCccccCCCHHHHHHHHHh----cCeEEecc---CcEEECC-EEEEEEEeeCCCCCccccccccccchhHH
Confidence 345 899999999864 34444443332 12322222 2444554 89999874211 1
Q ss_pred CCCHHHHHHHHHHHHhhcCC--CCeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCCcceeeec
Q 001892 545 DIDVYQFKFFAELVKEQVGE--RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYV 620 (999)
Q Consensus 545 dID~~Q~~wFe~ll~~~v~~--~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHhYsR~~~~ 620 (999)
.+...|.+|+++.+++..+. +.++|+++|+|.+..+. ..+.+...+++ .+++++++||+|++++..|-
T Consensus 142 ~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~-----~~~~~~~~~~~---~~v~~vl~GH~H~~~~~~~~ 211 (232)
T cd07393 142 KIFERELERLELSLKAAKKREKEKIKIVMLHYPPANENG-----DDSPISKLIEE---YGVDICVYGHLHGVGRDRAI 211 (232)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCC-----CHHHHHHHHHH---cCCCEEEECCCCCCcccccc
Confidence 11245899999988642222 24699999999876532 11222333344 48999999999998876644
No 16
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=99.29 E-value=3.5e-11 Score=128.86 Aligned_cols=118 Identities=16% Similarity=0.122 Sum_probs=77.4
Q ss_pred CcEEEeCCCCCCCCC-------hhHHHHHhhcccCCCcccCCCCcceEEEECCCcEEEEEEecCCC-----CCCCHHHHH
Q 001892 485 PQCYIIPGNHDWFDG-------LNTFMRFICHKSWLGGWFMPQKKSYFALQLPKGWWVFGLDLALH-----CDIDVYQFK 552 (999)
Q Consensus 485 P~vfAIPGNHDWyDG-------L~aF~R~F~~r~~lgGWrmpQ~~SYFAlrLP~~wWLlGLDsql~-----gdID~~Q~~ 552 (999)
.+++.||||||..-+ ...|.++|.. .++++..++ |.+++||+... +.+...|.+
T Consensus 85 ~pv~~VpGNHDig~~~~~~~~~~~rf~~~Fg~-------------~~~~~~~~~-~~fV~Lds~~l~~~~~~~~~~~~~~ 150 (257)
T cd08163 85 KMVESLPGNHDIGFGNGVVLPVRQRFEKYFGP-------------TSRVIDVGN-HTFVILDTISLSNKDDPDVYQPPRE 150 (257)
T ss_pred ceEEEeCCCcccCCCCCCCHHHHHHHHHHhCC-------------CceEEEECC-EEEEEEccccccCCcccccchhHHH
Confidence 349999999997322 2233334331 246788875 89999999642 235568999
Q ss_pred HHHHHHHhhcCCCCeEEEEecCCCCcccccc------cc--------cch------hhHHHHHhhhhCCceeEEEcCccC
Q 001892 553 FFAELVKEQVGERDSVIIMTHEPNWLLDWYF------NN--------VSG------KNVKHLICDYLKGRCKLRIAGDMH 612 (999)
Q Consensus 553 wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~------~~--------~t~------~~l~~Lle~vL~~RV~LvLAGHiH 612 (999)
|+++.+++ .+++.++||++|+|.|-...-. .. ... +.-..+++.+ +.+++||||+|
T Consensus 151 ~l~~~l~~-~~~~~p~ILl~H~Plyr~~~~~cg~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~---~P~~vfsGhdH 226 (257)
T cd08163 151 FLHSFSAM-KVKSKPRILLTHVPLYRPPNTSCGPLRESKTPLPYGYGYQYQNLLEPSLSEVILKAV---QPVIAFSGDDH 226 (257)
T ss_pred HHHhhhhc-cCCCCcEEEEeccccccCCCCCCCCccccCCCCCCCCCccceeecCHHHHHHHHHhh---CCcEEEecCCC
Confidence 99998753 4567899999999999774310 00 001 1111333444 88999999999
Q ss_pred Ccceeeec
Q 001892 613 HYMRHSYV 620 (999)
Q Consensus 613 hYsR~~~~ 620 (999)
+|=.+.-.
T Consensus 227 ~~C~~~h~ 234 (257)
T cd08163 227 DYCEVVHE 234 (257)
T ss_pred ccceeEcc
Confidence 98766533
No 17
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=99.27 E-value=7.7e-11 Score=122.31 Aligned_cols=151 Identities=23% Similarity=0.350 Sum_probs=93.8
Q ss_pred CCccEEEEcccccCCCCChhhhhhc--cccchhhhcCCCCCCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCC
Q 001892 421 PRGDVLLIGGDLAYPNPSAFTYERR--LFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFD 498 (999)
Q Consensus 421 PRgdfLVlgGDlvYP~gs~e~Y~~R--fv~PYe~Al~~~~~~~~e~~~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyD 498 (999)
+++|+||++||++-. |..++|+.. +.+ .. ..+.| ++.+|||||-+.
T Consensus 32 ~~~D~~v~tGDl~~~-~~~~~~~~~~~~l~----~~--------------------------~~~~~-~~~vpGNHD~~~ 79 (301)
T COG1409 32 LKPDLLVVTGDLTND-GEPEEYRRLKELLA----RL--------------------------ELPAP-VIVVPGNHDARV 79 (301)
T ss_pred CCCCEEEEccCcCCC-CCHHHHHHHHHHHh----hc--------------------------cCCCc-eEeeCCCCcCCc
Confidence 567999999999987 777777643 212 00 11334 999999999877
Q ss_pred ChhHHHHHhhcccCCCcccCCCCcceEEEECC-CcEEEEEEecCC----CCCCCHHHHHHHHHHHHhhcCCC--CeEEEE
Q 001892 499 GLNTFMRFICHKSWLGGWFMPQKKSYFALQLP-KGWWVFGLDLAL----HCDIDVYQFKFFAELVKEQVGER--DSVIIM 571 (999)
Q Consensus 499 GL~aF~R~F~~r~~lgGWrmpQ~~SYFAlrLP-~~wWLlGLDsql----~gdID~~Q~~wFe~ll~~~v~~~--d~VIL~ 571 (999)
.-...........+ .+...... .+|+++++|+.. .|.++..|++|+++.+++ .+.. +.+|++
T Consensus 80 ~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~q~~~l~~~l~~-~~~~~~~~~v~~ 148 (301)
T COG1409 80 VNGEAFSDQFFNRY----------AVLVGACSSGGWRVIGLDSSVPGVPLGRLGAEQLDWLEEALAA-APERAKDTVVVL 148 (301)
T ss_pred hHHHHhhhhhcccC----------cceEeeccCCceEEEEecCCCCCCCCCEECHHHHHHHHHHHHh-CccccCceEEEe
Confidence 64433332221110 11111111 459999999975 366889999999999874 2222 377899
Q ss_pred ecCCCCcccccccccchhhHHHHHhhhhCCc--eeEEEcCccCCc
Q 001892 572 THEPNWLLDWYFNNVSGKNVKHLICDYLKGR--CKLRIAGDMHHY 614 (999)
Q Consensus 572 tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~R--V~LvLAGHiHhY 614 (999)
.|||..............+............ |+++|+||+|--
T Consensus 149 ~hh~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 149 HHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred cCCCCCCCCCccceeeeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 9999888765544322222222222222233 999999999943
No 18
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=99.25 E-value=1.6e-10 Score=123.98 Aligned_cols=197 Identities=14% Similarity=0.134 Sum_probs=108.9
Q ss_pred CCCeEEEEEeecCCCCCCch-HHHHHhcCcccccccCCCCcccCCccEEEEcccccCCCCChhhhhhccccchhhhcCCC
Q 001892 379 KEDLWFDFMADTGDGGNSSY-SVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPP 457 (999)
Q Consensus 379 d~~lwFd~VaDtGDG~dStY-aVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~e~Y~~Rfv~PYe~Al~~~ 457 (999)
.+++.+.+++|+--|..... ...+++.+-+ ..++|+|+++||++..+ ..++.+ .+ ...++
T Consensus 47 ~~~~rI~~lSDlH~~~~~~~~~l~~~v~~i~-----------~~~pDlVli~GD~~d~~-~~~~~~-~~----~~~L~-- 107 (271)
T PRK11340 47 AAPFKILFLADLHYSRFVPLSLISDAIALGI-----------EQKPDLILLGGDYVLFD-MPLNFS-AF----SDVLS-- 107 (271)
T ss_pred CCCcEEEEEcccCCCCcCCHHHHHHHHHHHH-----------hcCCCEEEEccCcCCCC-ccccHH-HH----HHHHH--
Confidence 35799999999987633222 2344333211 24689999999977521 111111 11 11111
Q ss_pred CCCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCChh---HHHHHhhcccCCCcccCCCCcceEEEECCC-cE
Q 001892 458 PWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLN---TFMRFICHKSWLGGWFMPQKKSYFALQLPK-GW 533 (999)
Q Consensus 458 ~~~~~e~~~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL~---aF~R~F~~r~~lgGWrmpQ~~SYFAlrLP~-~w 533 (999)
+++. ..| +|+++||||++.+.. .+.+.+. + .|+..-++.+. .++.+. ..
T Consensus 108 --------------------~L~~-~~p-v~~V~GNHD~~~~~~~~~~~~~~l~-~---~gi~lL~n~~~-~i~~~~~~i 160 (271)
T PRK11340 108 --------------------PLAE-CAP-TFACFGNHDRPVGTEKNHLIGETLK-S---AGITVLFNQAT-VIATPNRQF 160 (271)
T ss_pred --------------------HHhh-cCC-EEEecCCCCcccCccchHHHHHHHH-h---cCcEEeeCCeE-EEeeCCcEE
Confidence 1121 235 999999999875432 2332222 1 35655555444 455443 37
Q ss_pred EEEEEecCCCCCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCC
Q 001892 534 WVFGLDLALHCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHH 613 (999)
Q Consensus 534 WLlGLDsql~gdID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHh 613 (999)
+++|+|+-..+..+.+ +..++++..|+++|+|.... +.-+.+++|.||||+|+
T Consensus 161 ~i~G~~d~~~~~~~~~----------~~~~~~~~~IlL~H~P~~~~-----------------~~~~~~~dL~lsGHTHG 213 (271)
T PRK11340 161 ELVGTGDLWAGQCKPP----------PASEANLPRLVLAHNPDSKE-----------------VMRDEPWDLMLCGHTHG 213 (271)
T ss_pred EEEEecchhccCCChh----------HhcCCCCCeEEEEcCCChhH-----------------hhccCCCCEEEeccccC
Confidence 8999986433222211 11234779999999998633 11134799999999997
Q ss_pred cceee--------ec----CCCCC--cccceEEEecCCCCCCCCcccCCC
Q 001892 614 YMRHS--------YV----PSDGP--VYVQHLLVNGCGGAFLHPTHVFSN 649 (999)
Q Consensus 614 YsR~~--------~~----~~~G~--~~~~~lIVsGGGGAfLHPTH~~~~ 649 (999)
=|-.- +. ...|. ....+++||-|-|.. .|.|....
T Consensus 214 GQi~lP~~~~~~~~~~~~~~~~G~~~~~~~~l~Vs~G~G~~-~p~R~~~~ 262 (271)
T PRK11340 214 GQLRVPLVGEPFAPVEDKRYVAGLNAFGERQIYTTRGVGSL-YGLRLNCR 262 (271)
T ss_pred CeEEccccCccccccccCcccCCcEEeCCcEEEEeCCccCC-cCCcccCC
Confidence 43221 11 11222 123456777777754 57776543
No 19
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=99.23 E-value=5.8e-11 Score=120.65 Aligned_cols=77 Identities=19% Similarity=0.061 Sum_probs=50.9
Q ss_pred CCCCCCHHHHHHHHHHHHhhc---CCCCeEEEEecCCCCccccccc----------c-c-chhhHHHHHhhhh-CCceeE
Q 001892 542 LHCDIDVYQFKFFAELVKEQV---GERDSVIIMTHEPNWLLDWYFN----------N-V-SGKNVKHLICDYL-KGRCKL 605 (999)
Q Consensus 542 l~gdID~~Q~~wFe~ll~~~v---~~~d~VIL~tHeP~w~~~~~~~----------~-~-t~~~l~~Lle~vL-~~RV~L 605 (999)
..+.++..|.+||++.+++.. ++..+.++++|+|......... + . ...+...+++.+. ..+|++
T Consensus 88 ~~g~l~~~ql~wL~~~l~~~~~~~~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~ 167 (199)
T cd07383 88 GYDWIRPSQIEWFKETSAALKKKYGKPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKG 167 (199)
T ss_pred CCCCCCHHHHHHHHHHHHHHhhccCCCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEE
Confidence 446688999999999986421 3557999999999876532211 1 0 1122333444443 468999
Q ss_pred EEcCccCCcceee
Q 001892 606 RIAGDMHHYMRHS 618 (999)
Q Consensus 606 vLAGHiHhYsR~~ 618 (999)
+++||+|.++...
T Consensus 168 v~~GH~H~~~~~~ 180 (199)
T cd07383 168 VFCGHDHGNDFCG 180 (199)
T ss_pred EEeCCCCCcceec
Confidence 9999999876543
No 20
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=99.21 E-value=1.4e-10 Score=113.89 Aligned_cols=142 Identities=16% Similarity=0.221 Sum_probs=84.1
Q ss_pred CCccEEEEcccccCCCCChhhhhhccccchhhhcCCCCCCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCCh
Q 001892 421 PRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGL 500 (999)
Q Consensus 421 PRgdfLVlgGDlvYP~gs~e~Y~~Rfv~PYe~Al~~~~~~~~e~~~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL 500 (999)
.++|+||++||++.. ++.++|+. + +.. ++.+.| +++||||||...-
T Consensus 22 ~~~D~vv~~GDl~~~-~~~~~~~~-~-~~l-----------------------------~~~~~p-~~~v~GNHD~~~~- 67 (188)
T cd07392 22 EEADAVIVAGDITNF-GGKEAAVE-I-NLL-----------------------------LAIGVP-VLAVPGNCDTPEI- 67 (188)
T ss_pred cCCCEEEECCCccCc-CCHHHHHH-H-HHH-----------------------------HhcCCC-EEEEcCCCCCHHH-
Confidence 358999999998864 33333321 1 111 122334 9999999996322
Q ss_pred hHHHHHhhcccCCCcccCCCCcceEEEECCCcEEEEEEecCC------CCCCCHHHHHHHHHHHHhhcCCCCeEEEEecC
Q 001892 501 NTFMRFICHKSWLGGWFMPQKKSYFALQLPKGWWVFGLDLAL------HCDIDVYQFKFFAELVKEQVGERDSVIIMTHE 574 (999)
Q Consensus 501 ~aF~R~F~~r~~lgGWrmpQ~~SYFAlrLP~~wWLlGLDsql------~gdID~~Q~~wFe~ll~~~v~~~d~VIL~tHe 574 (999)
.+.. . .++.....+ .+.++ +|.++|+|+.. .+..+..|.+|+ +.+. ..+++++|+++|+
T Consensus 68 ---~~~~-~----~~~~~~~~~---~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~l~--~~~~~~~ilv~H~ 132 (188)
T cd07392 68 ---LGLL-T----SAGLNLHGK---VVEVG-GYTFVGIGGSNPTPFNTPIELSEEEIVSD-GRLN--NLLAKNLILVTHA 132 (188)
T ss_pred ---HHhh-h----cCcEecCCC---EEEEC-CEEEEEeCCCCCCCCCCccccCHHHHHHh-hhhh--ccCCCCeEEEECC
Confidence 1111 1 112222221 23455 49999998642 234567888888 3332 2456899999999
Q ss_pred CCCcc--cccccc--cchhhHHHHHhhhhCCceeEEEcCccCCc
Q 001892 575 PNWLL--DWYFNN--VSGKNVKHLICDYLKGRCKLRIAGDMHHY 614 (999)
Q Consensus 575 P~w~~--~~~~~~--~t~~~l~~Lle~vL~~RV~LvLAGHiHhY 614 (999)
|++.. +..... ...+.+.++++++ +++++|+||+|.-
T Consensus 133 pp~~~~~d~~~~~~~~g~~~l~~li~~~---~~~~~l~GH~H~~ 173 (188)
T cd07392 133 PPYGTAVDRVSGGFHVGSKAIRKFIEER---QPLLCICGHIHES 173 (188)
T ss_pred CCcCCcccccCCCCccCCHHHHHHHHHh---CCcEEEEeccccc
Confidence 99752 211111 1234555666655 8899999999974
No 21
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=99.15 E-value=8e-10 Score=112.61 Aligned_cols=198 Identities=19% Similarity=0.208 Sum_probs=111.8
Q ss_pred CeEEEEEeecCCCCCCc-hHHHHHhcCcccccccCCCCcccCCccEEEEcccccCCCCChhhhhhccccchhhhcCCCCC
Q 001892 381 DLWFDFMADTGDGGNSS-YSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPW 459 (999)
Q Consensus 381 ~lwFd~VaDtGDG~dSt-YaVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~e~Y~~Rfv~PYe~Al~~~~~ 459 (999)
++.+..++|+--+.... ....+++++-. ..++|+++++||++......+ ..+.+.++.
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~-----------~~~~d~vl~~GD~~~~~~~~~---~~~~~~l~~------- 59 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKIN-----------ALKPDLVVLTGDLVDGSVDVL---ELLLELLKK------- 59 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHh-----------ccCCCEEEEcCcccCCcchhh---HHHHHHHhc-------
Confidence 35788999998765433 23444443221 124789999999988654332 112111110
Q ss_pred CcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCChhHH-HHHhhcccCCCcccCCCCcceEEEECCC-cEEEEE
Q 001892 460 YKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTF-MRFICHKSWLGGWFMPQKKSYFALQLPK-GWWVFG 537 (999)
Q Consensus 460 ~~~e~~~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL~aF-~R~F~~r~~lgGWrmpQ~~SYFAlrLP~-~wWLlG 537 (999)
++. ..| ++++|||||++.+.... .+... + .|+..-.+. +..++... ...+.|
T Consensus 60 -------------------l~~-~~~-v~~v~GNHD~~~~~~~~~~~~l~-~---~~v~~L~~~-~~~~~~~~~~i~i~G 113 (223)
T cd07385 60 -------------------LKA-PLG-VYAVLGNHDYYSGDEENWIEALE-S---AGITVLRNE-SVEISVGGATIGIAG 113 (223)
T ss_pred -------------------cCC-CCC-EEEECCCcccccCchHHHHHHHH-H---cCCEEeecC-cEEeccCCeEEEEEe
Confidence 111 234 99999999998875544 22222 1 234433332 23444433 256777
Q ss_pred EecCCCCCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCCccee
Q 001892 538 LDLALHCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRH 617 (999)
Q Consensus 538 LDsql~gdID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHhYsR~ 617 (999)
++.... +.+.+.+..+ +.++++..|+++|.|..... .-+.++++++|||+|..|..
T Consensus 114 ~~~~~~------~~~~~~~~~~-~~~~~~~~I~l~H~P~~~~~-----------------~~~~~~dl~l~GHtHggqi~ 169 (223)
T cd07385 114 VDDGLG------RRPDLEKALK-GLDEDDPNILLAHQPDTAEE-----------------AAAWGVDLQLSGHTHGGQIR 169 (223)
T ss_pred ccCccc------cCCCHHHHHh-CCCCCCCEEEEecCCChhHH-----------------hcccCccEEEeccCCCCEEe
Confidence 653222 1233444443 35667899999999985431 11458999999999987655
Q ss_pred eecCC------------CCC--cccceEEEecCCCCCCCCcccCCC
Q 001892 618 SYVPS------------DGP--VYVQHLLVNGCGGAFLHPTHVFSN 649 (999)
Q Consensus 618 ~~~~~------------~G~--~~~~~lIVsGGGGAfLHPTH~~~~ 649 (999)
.+... +|. ....+++||-|-|...-|.|...+
T Consensus 170 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~Vs~G~G~~~~~~R~~~~ 215 (223)
T cd07385 170 LPGIGPLVLSKLARPYDYGLYRKGGSQLYVSRGLGTWGPPLRLGCP 215 (223)
T ss_pred ccccccccchhhcCcccceEEEECCEEEEEcCCccCCCCchhcCCC
Confidence 43321 111 113367777777876667766443
No 22
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.
Probab=99.07 E-value=6.9e-09 Score=119.82 Aligned_cols=126 Identities=12% Similarity=0.158 Sum_probs=85.6
Q ss_pred cceEEEE-CCCcEEEEEEecCC-----CCCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCCCcccccccc-----cchhh
Q 001892 522 KSYFALQ-LPKGWWVFGLDLAL-----HCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNN-----VSGKN 590 (999)
Q Consensus 522 ~SYFAlr-LP~~wWLlGLDsql-----~gdID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~-----~t~~~ 590 (999)
..||+++ .++ |.+++||++. .+.++..|++||++.+++ .+++++||++|||.|..+....+ ....+
T Consensus 291 ~~YYSFd~~gg-vrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~--a~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~n 367 (496)
T TIGR03767 291 TGYYTFDIAGG-VRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRA--SSDTLFVLFSHHTSWSMVNELTDPVDPGEKRHL 367 (496)
T ss_pred CceEEEEeECC-EEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhc--CCCCCEEEEECCCCccccccccccccccccccC
Confidence 4699999 565 9999999975 357899999999999974 45678999999999875432111 11223
Q ss_pred HHHHHhhhhCC-ceeEEEcCccCCcc--eeeecCCCCCcccceEEEecCCCCCCCCcccCCCc
Q 001892 591 VKHLICDYLKG-RCKLRIAGDMHHYM--RHSYVPSDGPVYVQHLLVNGCGGAFLHPTHVFSNF 650 (999)
Q Consensus 591 l~~Lle~vL~~-RV~LvLAGHiHhYs--R~~~~~~~G~~~~~~lIVsGGGGAfLHPTH~~~~~ 650 (999)
.+++++-+-++ +|.++|+||+|.-. ++.+.++.+++.+-.=|+++.-=-|-||-|.++-.
T Consensus 368 ~~eLldLL~~ypnV~aVfsGHvH~n~i~~~~~~~~~~p~~gfweI~TaSlvdfPq~~Ri~Ei~ 430 (496)
T TIGR03767 368 GTELVSLLLEHPNVLAWVNGHTHSNKITAHRRVEGVGKDKGFWEINTASHIDFPQQGRIIELA 430 (496)
T ss_pred HHHHHHHHhcCCCceEEEECCcCCCccccccCCCCCCCcCCeEEEeccccccCCCCceEEEEE
Confidence 33443333244 79999999999432 22222222233333558888888888988887753
No 23
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=99.04 E-value=1.3e-09 Score=114.20 Aligned_cols=63 Identities=19% Similarity=0.235 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHhhcCCCCeEEEEecCCCCcccc-------cccc----cchhhHHHHHhhhhCCceeEEEcCccCCcc
Q 001892 548 VYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDW-------YFNN----VSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (999)
Q Consensus 548 ~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~-------~~~~----~t~~~l~~Lle~vL~~RV~LvLAGHiHhYs 615 (999)
+.|++|+++.+++ .+++++||+||+|+-.... .++. .....+.+++++. +++++++||+|.-.
T Consensus 149 ~~~l~~l~~~l~~--~~~~~~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~---~v~~~i~GH~H~~~ 222 (239)
T TIGR03729 149 AIVLKQLKKQLNQ--LDNKQVIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKY---EIKDVIFGHLHRRF 222 (239)
T ss_pred HHHHHHHHHHHHh--cCCCCEEEEEcccchHHHhcCCCCCcchhhhhhccChHHHHHHHHHh---CCCEEEECCccCCC
Confidence 5789999998864 3457899999998743211 0111 1124455555554 89999999999643
No 24
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.96 E-value=1.7e-08 Score=106.83 Aligned_cols=174 Identities=14% Similarity=0.148 Sum_probs=101.7
Q ss_pred eEEEEEeecCCCCCCchHHHHHhcCcccccccCCCCcccCCccEEEEcccccCCCCChhhhhhccccchhhhcCCCCCCc
Q 001892 382 LWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPWYK 461 (999)
Q Consensus 382 lwFd~VaDtGDG~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~e~Y~~Rfv~PYe~Al~~~~~~~ 461 (999)
..+..++|+=+ ..-++.++++... ..++|++|++||++..++..++|..-+ +..
T Consensus 5 ~kIl~iSDiHg---n~~~le~l~~~~~-----------~~~~D~vv~~GDl~~~g~~~~~~~~~l-~~l----------- 58 (224)
T cd07388 5 RYVLATSNPKG---DLEALEKLVGLAP-----------ETGADAIVLIGNLLPKAAKSEDYAAFF-RIL----------- 58 (224)
T ss_pred eEEEEEEecCC---CHHHHHHHHHHHh-----------hcCCCEEEECCCCCCCCCCHHHHHHHH-HHH-----------
Confidence 35778888874 2334444443211 135799999999999865565554311 211
Q ss_pred ccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCChhHHHH-Hhhccc-CCCcccCCCCcceEEEECCCcEEEEEEe
Q 001892 462 KDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMR-FICHKS-WLGGWFMPQKKSYFALQLPKGWWVFGLD 539 (999)
Q Consensus 462 ~e~~~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL~aF~R-~F~~r~-~lgGWrmpQ~~SYFAlrLP~~wWLlGLD 539 (999)
++...| +++||||||- .+..+++ .+.... .........+ .++...+..++|+|
T Consensus 59 ------------------~~l~~p-v~~V~GNhD~--~v~~~l~~~~~~~~~~p~~~~lh~~----~~~~~g~~~~~GlG 113 (224)
T cd07388 59 ------------------GEAHLP-TFYVPGPQDA--PLWEYLREAYNAELVHPEIRNVHET----FAFWRGPYLVAGVG 113 (224)
T ss_pred ------------------HhcCCc-eEEEcCCCCh--HHHHHHHHHhcccccCccceecCCC----eEEecCCeEEEEec
Confidence 122234 9999999994 2434443 221110 0112333332 23443447899998
Q ss_pred cCCCC--CCCHHHH----HHHHH----HHHhhcCCCCeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcC
Q 001892 540 LALHC--DIDVYQF----KFFAE----LVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAG 609 (999)
Q Consensus 540 sql~g--dID~~Q~----~wFe~----ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAG 609 (999)
-.+.. ..+..|. +|+.+ .+.+ . +.++.||++|+|++-.+.. +...+.++++|+++ +.++.++|
T Consensus 114 Gs~~~~~e~sE~e~~~~~~~~~~~~l~~~~~-~-~~~~~VLv~H~PP~g~g~~--h~GS~alr~~I~~~---~P~l~i~G 186 (224)
T cd07388 114 GEIADEGEPEEHEALRYPAWVAEYRLKALWE-L-KDYRKVFLFHTPPYHKGLN--EQGSHEVAHLIKTH---NPLVVLVG 186 (224)
T ss_pred CCcCCCCCcCHHHHhhhhhhHHHHHHHHHHh-C-CCCCeEEEECCCCCCCCCC--ccCHHHHHHHHHHh---CCCEEEEc
Confidence 54422 3445552 34322 3322 2 4679999999999987432 23456677788887 89999999
Q ss_pred ccCC
Q 001892 610 DMHH 613 (999)
Q Consensus 610 HiHh 613 (999)
|+||
T Consensus 187 Hih~ 190 (224)
T cd07388 187 GKGQ 190 (224)
T ss_pred CCce
Confidence 9994
No 25
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.79 E-value=2e-08 Score=96.30 Aligned_cols=49 Identities=12% Similarity=-0.023 Sum_probs=30.9
Q ss_pred EEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCCcceee
Q 001892 569 IIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHS 618 (999)
Q Consensus 569 IL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHhYsR~~ 618 (999)
|+++|+|.+........... +.+.+++.+.+.+++++++||+|......
T Consensus 81 iv~~Hhp~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~l~GH~H~~~~~~ 129 (144)
T cd07400 81 IVVLHHPLVPPPGSGRERLL-DAGDALKLLAEAGVDLVLHGHKHVPYVGN 129 (144)
T ss_pred EEEecCCCCCCCccccccCC-CHHHHHHHHHHcCCCEEEECCCCCcCeee
Confidence 99999999877442221111 23333333335699999999999865554
No 26
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.73 E-value=6.6e-08 Score=95.33 Aligned_cols=52 Identities=19% Similarity=0.124 Sum_probs=31.2
Q ss_pred CeEEEEecCCCCccccccccc-chhh--HHHHHhhhh-CCceeEEEcCccCCccee
Q 001892 566 DSVIIMTHEPNWLLDWYFNNV-SGKN--VKHLICDYL-KGRCKLRIAGDMHHYMRH 617 (999)
Q Consensus 566 d~VIL~tHeP~w~~~~~~~~~-t~~~--l~~Lle~vL-~~RV~LvLAGHiHhYsR~ 617 (999)
+++||++|||+...+....+. ...+ ....+.+.+ +.+|++.++||+|.....
T Consensus 97 ~~~vv~~HhpP~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~~~ 152 (166)
T cd07404 97 GKTVVVTHHAPSPLSLAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNFDY 152 (166)
T ss_pred CCEEEEeCCCCCccccCccccCCCcchhhhhccHhHHhhcCCCEEEECCccccceE
Confidence 699999999998764322111 1111 111122222 468999999999975433
No 27
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=98.71 E-value=8.1e-08 Score=104.97 Aligned_cols=209 Identities=18% Similarity=0.160 Sum_probs=108.3
Q ss_pred CCCCCeEEEEEeecCCCCCCchHHHHHhcCcccccccCCCCcccCCccEEEEcccccCC--CCChhhhhhccccchhhhc
Q 001892 377 SEKEDLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYP--NPSAFTYERRLFRPFEYAL 454 (999)
Q Consensus 377 ~~d~~lwFd~VaDtGDG~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP--~gs~e~Y~~Rfv~PYe~Al 454 (999)
....++.+-.++|+=-..-..-..+.+.+-.+ .+| |+++++||++.- ....+.....+ +
T Consensus 40 ~~~~~~~iv~lSDlH~~~~~~~~~~~~~~i~~----------~~~--DlivltGD~~~~~~~~~~~~~~~~L-~------ 100 (284)
T COG1408 40 ASLQGLKIVQLSDLHSLPFREEKLALLIAIAN----------ELP--DLIVLTGDYVDGDRPPGVAALALFL-A------ 100 (284)
T ss_pred cccCCeEEEEeehhhhchhhHHHHHHHHHHHh----------cCC--CEEEEEeeeecCCCCCCHHHHHHHH-H------
Confidence 44577889999998743322222333333222 133 999999997763 11111111111 1
Q ss_pred CCCCCCcccccccCCCCCCCCCcccccCCCC-cEEEeCCCCCCCCChhHH-HHHhhccc--CC--CcccCCCCcceEEEE
Q 001892 455 QPPPWYKKDHVAVNKPEVPSGVPELKQYDGP-QCYIIPGNHDWFDGLNTF-MRFICHKS--WL--GGWFMPQKKSYFALQ 528 (999)
Q Consensus 455 ~~~~~~~~e~~~~~kpe~p~~~~~l~~~~gP-~vfAIPGNHDWyDGL~aF-~R~F~~r~--~l--gGWrmpQ~~SYFAlr 528 (999)
.+..| .+|||.|||||+...... ...+.... .. .+....+..+=+--.
T Consensus 101 --------------------------~L~~~~gv~av~GNHd~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (284)
T COG1408 101 --------------------------KLKAPLGVFAVLGNHDYGVDRSNVYIGDLLEELGRVVLRNEIAVIDLLALRIEV 154 (284)
T ss_pred --------------------------hhhccCCEEEEecccccccccccchhhhhhhhcceeeecccchhcccccccccc
Confidence 12222 399999999999886653 22222111 00 011111111000001
Q ss_pred CCCcEEEEEEecCCCCCCCHHHHHH---HHHHHHhhcCCCCeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeE
Q 001892 529 LPKGWWVFGLDLALHCDIDVYQFKF---FAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKL 605 (999)
Q Consensus 529 LP~~wWLlGLDsql~gdID~~Q~~w---Fe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~L 605 (999)
....-|..++|.+..... ..+.++ .++.+ ++.+++.+.|+++|+|.... ++-.+.++|
T Consensus 155 ~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~IlL~H~P~~~~-----------------~~~~~~~dL 215 (284)
T COG1408 155 GGLDLYLAGVEDILAGLP-LAPFTIGLDIAEAL-KQLDEDLPGILLSHEPDIIL-----------------QLRLYGVDL 215 (284)
T ss_pred cccccccccCchHHhhCc-ccccccccchhhhh-ccccccccceEeccCCceeh-----------------hhccCcceE
Confidence 111245666665544332 000000 22222 35677889999999999755 222348999
Q ss_pred EEcCccCCcceeeecC-------C-----CCC--cccceEEEecCCCCCCCCcccCCC
Q 001892 606 RIAGDMHHYMRHSYVP-------S-----DGP--VYVQHLLVNGCGGAFLHPTHVFSN 649 (999)
Q Consensus 606 vLAGHiHhYsR~~~~~-------~-----~G~--~~~~~lIVsGGGGAfLHPTH~~~~ 649 (999)
+||||+|.=|-..|.. . .|. +-+.+++||.|-|..--|.|...+
T Consensus 216 vLSGHTHGGQi~~p~~~~l~~~~~~~~~~~g~~~~~~~~lyVSrGlG~~~~p~R~~~~ 273 (284)
T COG1408 216 VLSGHTHGGQIRLPLWGPLVTNALSGRYRAGGLRQFGAQLYVSRGLGTTGPPIRLGCP 273 (284)
T ss_pred EEeccccCCeEEeecccccccccccccccccceecCCceEEEeCCcCCCCCCcccCCC
Confidence 9999999733322211 0 111 112368999999987677777654
No 28
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.66 E-value=1.2e-07 Score=85.65 Aligned_cols=50 Identities=22% Similarity=0.242 Sum_probs=32.8
Q ss_pred EEEecCCCCcccccccccchhhHHHHHhhhh-CCceeEEEcCccCCcceeee
Q 001892 569 IIMTHEPNWLLDWYFNNVSGKNVKHLICDYL-KGRCKLRIAGDMHHYMRHSY 619 (999)
Q Consensus 569 IL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL-~~RV~LvLAGHiHhYsR~~~ 619 (999)
|+++|.|.+.......... ......+.+.+ ..++++.++||+|.+++...
T Consensus 70 i~~~H~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~~ 120 (131)
T cd00838 70 ILLTHGPPYDPLDELSPDE-DPGSEALLELLEKYGVDLVLSGHTHVYERREP 120 (131)
T ss_pred EEEeccCCCCCchhhcccc-hhhHHHHHHHHHHhCCCEEEeCCeeccccccC
Confidence 9999999998865432211 11112222222 56899999999999888763
No 29
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=98.52 E-value=2.2e-07 Score=94.04 Aligned_cols=123 Identities=15% Similarity=0.096 Sum_probs=63.7
Q ss_pred CcEEEeCCCCCCCCChhHHHHHhhcccCCCcccCC----CCcceEEEEC-CCcEEEEEEecCCCCCCCHHHHHHHHHHHH
Q 001892 485 PQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMP----QKKSYFALQL-PKGWWVFGLDLALHCDIDVYQFKFFAELVK 559 (999)
Q Consensus 485 P~vfAIPGNHDWyDGL~aF~R~F~~r~~lgGWrmp----Q~~SYFAlrL-P~~wWLlGLDsql~gdID~~Q~~wFe~ll~ 559 (999)
.++++++||||.+.+......... ..++... .......... ..+..|+|++....... ..+.+..++..
T Consensus 77 ~~v~~~~GNHD~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~~~~-~~~~~~~~~~~- 150 (223)
T cd00840 77 IPVFIIAGNHDSPSRLGALSPLLA----LSGLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRRSRL-RDLLADAELRP- 150 (223)
T ss_pred CCEEEecCCCCCccccccccchHh----hCcEEEEcccCcceeEEEeccCCeEEEEEECCCCCHHHH-HHHHHHHHHHh-
Confidence 349999999999877544322111 1122210 0111122222 23477888875322211 12222223333
Q ss_pred hhcCCCCeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCCccee
Q 001892 560 EQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRH 617 (999)
Q Consensus 560 ~~v~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHhYsR~ 617 (999)
.+..+++..|+++|.|.......... . ....++.+...+++++++||+|..+..
T Consensus 151 ~~~~~~~~~Il~~H~~~~~~~~~~~~-~---~~~~~~~~~~~~~d~v~~GH~H~~~~~ 204 (223)
T cd00840 151 RPLDPDDFNILLLHGGVAGAGPSDSE-R---APFVPEALLPAGFDYVALGHIHRPQII 204 (223)
T ss_pred hccCCCCcEEEEEeeeeecCCCCccc-c---cccCcHhhcCcCCCEEECCCcccCeee
Confidence 23566789999999997544211110 0 011122333568999999999976543
No 30
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes.
Probab=98.49 E-value=1e-06 Score=101.71 Aligned_cols=86 Identities=16% Similarity=0.162 Sum_probs=56.2
Q ss_pred eEEEECCCcE--EEEEEecCC-----------CCCCCHHHHHHHHHHHHhhcC-CCCeEEEEecCCCCcccc-cc---c-
Q 001892 524 YFALQLPKGW--WVFGLDLAL-----------HCDIDVYQFKFFAELVKEQVG-ERDSVIIMTHEPNWLLDW-YF---N- 584 (999)
Q Consensus 524 YFAlrLP~~w--WLlGLDsql-----------~gdID~~Q~~wFe~ll~~~v~-~~d~VIL~tHeP~w~~~~-~~---~- 584 (999)
||+++.-.+| .+++||+-. ++.+|..|++||++.|++ .+ .+..||++.|+|....+. .. .
T Consensus 294 yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~-a~a~~p~VVV~hHpPi~t~gi~~md~w~~ 372 (492)
T TIGR03768 294 CYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELAR-GQADGQLMIIAAHIPIAVSPIGSEMEWWL 372 (492)
T ss_pred eeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHh-CcCCCceEEEEeCCCcccCCccchhhhcc
Confidence 9999954335 999999753 345899999999999974 44 445677778888775211 11 0
Q ss_pred -c-------cch---hhHHHHHhhhhCCceeEEEcCccC
Q 001892 585 -N-------VSG---KNVKHLICDYLKGRCKLRIAGDMH 612 (999)
Q Consensus 585 -~-------~t~---~~l~~Lle~vL~~RV~LvLAGHiH 612 (999)
. +.. +.+..+++++ .+|.+.||||+|
T Consensus 373 ~~~~~~~~L~n~~~~~eLlaLL~~h--PnVla~LsGHvH 409 (492)
T TIGR03768 373 GAADANPDLQNAVSLTGLVTTLQKY--PNLLMWIAGHRH 409 (492)
T ss_pred ccccccccccccccHHHHHHHHhcC--CCeEEEEcCCcc
Confidence 0 011 1232333332 479999999999
No 31
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=98.47 E-value=5.2e-07 Score=86.67 Aligned_cols=47 Identities=23% Similarity=0.292 Sum_probs=32.0
Q ss_pred CCeEEEEecCCCCcccccccc---cchhhHHHHHhhhhCCceeEEEcCccCCc
Q 001892 565 RDSVIIMTHEPNWLLDWYFNN---VSGKNVKHLICDYLKGRCKLRIAGDMHHY 614 (999)
Q Consensus 565 ~d~VIL~tHeP~w~~~~~~~~---~t~~~l~~Lle~vL~~RV~LvLAGHiHhY 614 (999)
+++.|+++|.|.+....+... ...+.+.+++++. ++++.++||+|..
T Consensus 67 ~~~~ilv~H~~p~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~i~GH~H~~ 116 (135)
T cd07379 67 EDTDILVTHGPPYGHLDLVSSGQRVGCEELLNRVQRV---RPKLHVFGHIHEG 116 (135)
T ss_pred CCCEEEEECCCCCcCccccccCcccCCHHHHHHHHHH---CCcEEEEcCcCCc
Confidence 467899999999876443211 1233455555554 7899999999975
No 32
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=98.07 E-value=1.1e-05 Score=84.40 Aligned_cols=42 Identities=19% Similarity=0.223 Sum_probs=30.4
Q ss_pred EEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCCcceeeec
Q 001892 569 IIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYV 620 (999)
Q Consensus 569 IL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHhYsR~~~~ 620 (999)
|+++|-|.+..+. +-..+.+. +.++++.+|||.|.+..++..
T Consensus 112 i~lsH~P~~~~~~-------~~~~~~~~---~~~p~~Ifs~H~H~s~~~~~~ 153 (195)
T cd08166 112 IMLSHVPLLAEGG-------QALKHVVT---DLDPDLIFSAHRHKSSIFMYD 153 (195)
T ss_pred eeeeccccccccc-------HHHHHHHH---hcCceEEEEcCccceeeEEee
Confidence 9999999987632 12223333 449999999999998887644
No 33
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=98.05 E-value=1.2e-05 Score=81.55 Aligned_cols=35 Identities=23% Similarity=0.258 Sum_probs=26.5
Q ss_pred EEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCCcceeeecC
Q 001892 569 IIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYVP 621 (999)
Q Consensus 569 IL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHhYsR~~~~~ 621 (999)
|+++|+|.+. +++ +.+++++||||+|.+.+.....
T Consensus 119 i~l~H~p~~~---------------~~~---~~~~~~~lsGH~H~~~~~~~~~ 153 (171)
T cd07384 119 ILLTHIPLYR---------------LLD---TIKPVLILSGHDHDQCEVVHSS 153 (171)
T ss_pred eeEECCccHH---------------HHh---ccCceEEEeCcccCCeEEEecC
Confidence 9999999853 112 3478899999999987776553
No 34
>PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: A phosphate monoester + H(2)O = an alcohol + phosphate ; PDB: 2YEQ_B.
Probab=97.84 E-value=9e-05 Score=85.17 Aligned_cols=91 Identities=13% Similarity=0.138 Sum_probs=46.3
Q ss_pred CcceEEEECCCcEEEEEEecCCCCC---------------------CCHHHHHHHHHHHHhhcCCCCeEEEEecCCCCcc
Q 001892 521 KKSYFALQLPKGWWVFGLDLALHCD---------------------IDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLL 579 (999)
Q Consensus 521 ~~SYFAlrLP~~wWLlGLDsql~gd---------------------ID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~ 579 (999)
.+.|+.++.++..-++.||+-..-+ +...|++||++.+++ ....++|+++.-|.=..
T Consensus 252 ~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~--s~a~~kvi~s~v~~~~~ 329 (453)
T PF09423_consen 252 GRIYRSFRYGDLVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSRTMLGEEQWDWLEDWLAS--SQATWKVIGSSVPFSPL 329 (453)
T ss_dssp ----EEEEETTTEEEEE--SSSS----CCCSSEE--HHHH-TT--SS-HHHHHHHHHHHHH----SSEEEEE-SS--S--
T ss_pred CceEEEEecCCceeEEEEechhccccccccccccccccccCCccCcCCHHHHHHHHHHHhc--CCCcEEEEEeCCceecc
Confidence 3469999999877899999964211 346899999998874 33678898887765332
Q ss_pred ccc---------cccc-c-hhhHHHHHhhhhCCce--eEEEcCccCC
Q 001892 580 DWY---------FNNV-S-GKNVKHLICDYLKGRC--KLRIAGDMHH 613 (999)
Q Consensus 580 ~~~---------~~~~-t-~~~l~~Lle~vL~~RV--~LvLAGHiHh 613 (999)
... .+.- . ....++|++.+-..++ -++||||+|.
T Consensus 330 ~~~~~~~~~~~~~d~W~g~~~er~~Ll~~l~~~~~~~vV~LSGDvH~ 376 (453)
T PF09423_consen 330 NFPDAAEGLPFNMDSWDGYPAERQRLLDFLRESGIRNVVFLSGDVHA 376 (453)
T ss_dssp -SS-SS-S--EETTSGGGSHHHHHHHHHHHHHTT---EEEEE-SSSS
T ss_pred cccccccccccCCCchhhCHHHHHHHHHHHHhhCCCCEEEEecCcch
Confidence 111 0010 1 1112223333322344 4899999996
No 35
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=97.75 E-value=0.00027 Score=76.26 Aligned_cols=58 Identities=17% Similarity=0.204 Sum_probs=37.1
Q ss_pred hcCCCCeEEEEecCCCCcccccccc------------cchhhHHHHHhhhh-CCceeEEEcCccCCcceee
Q 001892 561 QVGERDSVIIMTHEPNWLLDWYFNN------------VSGKNVKHLICDYL-KGRCKLRIAGDMHHYMRHS 618 (999)
Q Consensus 561 ~v~~~d~VIL~tHeP~w~~~~~~~~------------~t~~~l~~Lle~vL-~~RV~LvLAGHiHhYsR~~ 618 (999)
..+++++.|+++|.|.--.+...++ .....+...|+++- +.++++++.||+||=-|+.
T Consensus 142 ~~~~~~~~VliaH~~~~G~g~~~~~~cg~d~~~~~~~~G~~~l~~ai~~~~~~~~~~l~~fGH~H~~l~~~ 212 (238)
T cd07397 142 KAPPDLPLILLAHNGPSGLGSDAEDPCGRDWKPPGGDWGDPDLALAISQIQQGRQVPLVVFGHMHHRLRRG 212 (238)
T ss_pred hcCCCCCeEEEeCcCCcCCCcccccccccccCCcCCCCCCHHHHHHHHHHhccCCCCEEEeCCccCccccc
Confidence 4677889999999998666421111 11223434444442 4568999999999965554
No 36
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=97.72 E-value=6.1e-05 Score=78.87 Aligned_cols=32 Identities=28% Similarity=0.413 Sum_probs=24.3
Q ss_pred EEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCCcceee
Q 001892 569 IIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHS 618 (999)
Q Consensus 569 IL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHhYsR~~ 618 (999)
|+++|+|.+... .+.+++++||||+|.=++..
T Consensus 129 ilL~H~P~~~~~------------------~~~~~dl~lSGHtHgGqi~~ 160 (193)
T cd08164 129 ILLTHVPLYKIF------------------LEGKPGLILTGHDHEGCDYQ 160 (193)
T ss_pred EEEEcccceecc------------------ccCCCCEEEeCccCCCeEEE
Confidence 999999987620 13478999999999865554
No 37
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.67 E-value=0.00011 Score=73.70 Aligned_cols=34 Identities=21% Similarity=0.330 Sum_probs=23.9
Q ss_pred EEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCCcceeeec
Q 001892 569 IIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYV 620 (999)
Q Consensus 569 IL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHhYsR~~~~ 620 (999)
|++.|+|... .+.+ .++++.||||+|...+....
T Consensus 107 ~~l~H~p~~~---------------~~~~---~~~~~~l~GH~H~~~~~~~~ 140 (156)
T cd08165 107 ILLQHFPLYR---------------LLQW---LKPRLVLSGHTHSFCEVTHP 140 (156)
T ss_pred eeeeCChHHH---------------HHHh---hCCCEEEEcccCCCceeEEE
Confidence 8999999732 1223 26779999999986666533
No 38
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.62 E-value=0.00023 Score=69.05 Aligned_cols=49 Identities=22% Similarity=0.066 Sum_probs=28.8
Q ss_pred eEEEEecCCCCcccccccc--cchhhHHHHHhhhhCCceeEEEcCccCCcceee
Q 001892 567 SVIIMTHEPNWLLDWYFNN--VSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHS 618 (999)
Q Consensus 567 ~VIL~tHeP~w~~~~~~~~--~t~~~l~~Lle~vL~~RV~LvLAGHiHhYsR~~ 618 (999)
..|+++|+|.+-....... ...+.+.++++ +.++++.|+||+|......
T Consensus 57 ~~Ilv~H~pp~~~~~~~~~~~~g~~~l~~~l~---~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 57 VDILLTHAPPAGIGDGEDFAHRGFEAFLDFID---RFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred cCEEEECCCCCcCcCcccccccCHHHHHHHHH---HHCCcEEEEcCcCCCcCcc
Confidence 5689999998754321110 11222333333 3479999999999644433
No 39
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=97.50 E-value=0.0027 Score=68.16 Aligned_cols=177 Identities=21% Similarity=0.257 Sum_probs=93.3
Q ss_pred CeEEEEEeecCCCCCCchHHHHHhcCcccccccCCCCcccCCccEEEEcccccCCC-CChhhhhhccccchhhhcCCCCC
Q 001892 381 DLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPN-PSAFTYERRLFRPFEYALQPPPW 459 (999)
Q Consensus 381 ~lwFd~VaDtGDG~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~-gs~e~Y~~Rfv~PYe~Al~~~~~ 459 (999)
++-+-+++|.-...++.-++....+. -++|+|+++||++|-. +..+.-.... . .++
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~--------------~~~D~lviaGDlt~~~~~~~~~~~~~~-~-~e~------- 59 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAAD--------------IRADLLVIAGDLTYFHFGPKEVAEELN-K-LEA------- 59 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhh--------------ccCCEEEEecceehhhcCchHHHHhhh-H-HHH-------
Confidence 45677888886665555555443332 2579999999999332 2111111110 0 111
Q ss_pred CcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCChhHHHHHhhcccCCCcccCCCCcceEEEECCCcEEEEEEe
Q 001892 460 YKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQKKSYFALQLPKGWWVFGLD 539 (999)
Q Consensus 460 ~~~e~~~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL~aF~R~F~~r~~lgGWrmpQ~~SYFAlrLP~~wWLlGLD 539 (999)
++....| ++|+|||=|- ..-.+.+.. .|-.+..+ ++++.. .-+.|+.
T Consensus 60 -------------------l~~~~~~-v~avpGNcD~----~~v~~~l~~----~~~~v~~~----v~~i~~-~~~~G~G 106 (226)
T COG2129 60 -------------------LKELGIP-VLAVPGNCDP----PEVIDVLKN----AGVNVHGR----VVEIGG-YGFVGFG 106 (226)
T ss_pred -------------------HHhcCCe-EEEEcCCCCh----HHHHHHHHh----cccccccc----eEEecC-cEEEEec
Confidence 2232344 9999999653 111122111 12222222 555554 3455532
Q ss_pred -cCCCC-----CCC-HHHHHHHHHHHHhhcCCCCeEEEEecCCCCcccccc----cccchhhHHHHHhhhhCCceeEEEc
Q 001892 540 -LALHC-----DID-VYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYF----NNVSGKNVKHLICDYLKGRCKLRIA 608 (999)
Q Consensus 540 -sql~g-----dID-~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~----~~~t~~~l~~Lle~vL~~RV~LvLA 608 (999)
++... ... +.=+..+...+++..+ ...|+.+|.|++....-. .+.....++.++++. ++.+.++
T Consensus 107 gsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~--~~~Il~~HaPP~gt~~d~~~g~~hvGS~~vr~~ieef---qP~l~i~ 181 (226)
T COG2129 107 GSNPTPFNTPREFSEDEIYSKLKSLVKKADN--PVNILLTHAPPYGTLLDTPSGYVHVGSKAVRKLIEEF---QPLLGLH 181 (226)
T ss_pred ccCCCCCCCccccCHHHHHHHHHHHHhcccC--cceEEEecCCCCCccccCCCCccccchHHHHHHHHHh---CCceEEE
Confidence 22211 122 2334555565543111 122999999999763321 112245677888887 8899999
Q ss_pred CccCCcceee
Q 001892 609 GDMHHYMRHS 618 (999)
Q Consensus 609 GHiHhYsR~~ 618 (999)
||+|-++-..
T Consensus 182 GHIHEs~G~d 191 (226)
T COG2129 182 GHIHESRGID 191 (226)
T ss_pred eeeccccccc
Confidence 9999744443
No 40
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=97.47 E-value=0.0041 Score=65.53 Aligned_cols=117 Identities=17% Similarity=0.156 Sum_probs=62.0
Q ss_pred EEEeCCCCCCCCChhHHHHHhhccc--CCC-ccc-------CCCCcceEEEECCC-cEEEEEEecCCCCCC---------
Q 001892 487 CYIIPGNHDWFDGLNTFMRFICHKS--WLG-GWF-------MPQKKSYFALQLPK-GWWVFGLDLALHCDI--------- 546 (999)
Q Consensus 487 vfAIPGNHDWyDGL~aF~R~F~~r~--~lg-GWr-------mpQ~~SYFAlrLP~-~wWLlGLDsql~gdI--------- 546 (999)
-++++||||+.-|.+.+...+-+-. +++ +.. .+.-..|-.++... ..-++|+.+......
T Consensus 72 d~~~~GNHe~d~g~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~~~~~~~~~~~~~~~~ 151 (252)
T cd00845 72 DAVTIGNHEFDYGLDALAELYKDANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTTPDTPTYTPLGWIIGL 151 (252)
T ss_pred CEEeeccccccccHHHHHHHHHhCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEeccccceeecCCCcccCc
Confidence 4456799998767776665543322 111 110 11112354555542 255777765432111
Q ss_pred C-HHHHHHHHHHHHhhcCCCCeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCCccee
Q 001892 547 D-VYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRH 617 (999)
Q Consensus 547 D-~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHhYsR~ 617 (999)
+ ....+-+++..++..++.|-||+++|.|.-.. .++.++. ..++++|+||.|.....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~D~vIvl~H~g~~~~------------~~la~~~--~giDlvlggH~H~~~~~ 209 (252)
T cd00845 152 PFEDLAEAVAVAEELLAEGADVIILLSHLGLDDD------------EELAEEV--PGIDVILGGHTHHLLEE 209 (252)
T ss_pred eecCHHHHHHHHHHHHhCCCCEEEEEeccCccch------------HHHHhcC--CCccEEEcCCcCcccCC
Confidence 0 11122233322233456789999999887421 1232332 57999999999986543
No 41
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=97.44 E-value=0.0033 Score=67.51 Aligned_cols=133 Identities=19% Similarity=0.141 Sum_probs=70.1
Q ss_pred EEEeCCCCCCCCChhHHHHHhhcc--cCCC-cc-------cCCCCcceEEEECCCc-EEEEEEecCCCC--------C--
Q 001892 487 CYIIPGNHDWFDGLNTFMRFICHK--SWLG-GW-------FMPQKKSYFALQLPKG-WWVFGLDLALHC--------D-- 545 (999)
Q Consensus 487 vfAIPGNHDWyDGL~aF~R~F~~r--~~lg-GW-------rmpQ~~SYFAlrLP~~-wWLlGLDsql~g--------d-- 545 (999)
-++++||||+.-|.+.+.+.+.+- .+++ .. ..++-.+|-.++...- .=++|+.+.... .
T Consensus 73 d~~~~GNHefd~g~~~l~~~~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~~~~~~~~~~~ 152 (257)
T cd07406 73 DLACFGNHEFDFGEDQLQKRLGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLETLTIDPEYVR 152 (257)
T ss_pred cEEeecccccccCHHHHHHHHhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecccccccccCCCCcce
Confidence 466899999977888777765332 1221 11 1112235767776431 335666543211 1
Q ss_pred -CCHHHHHHHHHHHH-hhcCCCCeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCCcceeeecCCC
Q 001892 546 -IDVYQFKFFAELVK-EQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYVPSD 623 (999)
Q Consensus 546 -ID~~Q~~wFe~ll~-~~v~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHhYsR~~~~~~~ 623 (999)
.|. .+-+.+.++ .+.+.-|-||+++|-|.... ..+.+++ ..++++|+||.|..... ...
T Consensus 153 ~~d~--~~~~~~~v~~~~~~~~D~iVvl~H~g~~~d------------~~la~~~--~~iD~IlgGH~H~~~~~---~~~ 213 (257)
T cd07406 153 YRDY--VETARELVDELREQGADLIIALTHMRLPND------------KRLAREV--PEIDLILGGHDHEYILV---QVG 213 (257)
T ss_pred EcCH--HHHHHHHHHHHHhCCCCEEEEEeccCchhh------------HHHHHhC--CCCceEEecccceeEee---eEC
Confidence 121 122222221 11234589999999985211 1233444 57999999999986521 111
Q ss_pred CCcccceEEEecCCCCCCC
Q 001892 624 GPVYVQHLLVNGCGGAFLH 642 (999)
Q Consensus 624 G~~~~~~lIVsGGGGAfLH 642 (999)
...++-+|+.|.++-
T Consensus 214 ----~t~vv~~g~~g~~vg 228 (257)
T cd07406 214 ----GTPIVKSGSDFRTVY 228 (257)
T ss_pred ----CEEEEeCCcCcceEE
Confidence 224555666665543
No 42
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=97.40 E-value=0.0006 Score=66.47 Aligned_cols=59 Identities=17% Similarity=0.093 Sum_probs=33.6
Q ss_pred CCeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCCcceeeecCCCCCcccceEEEecCCCC
Q 001892 565 RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGA 639 (999)
Q Consensus 565 ~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHhYsR~~~~~~~G~~~~~~lIVsGGGGA 639 (999)
++..|+++|-|.+.... ..+. ..+++ ..+++++++||+|...... .. ...+|-.|.-|.
T Consensus 74 ~g~~i~v~Hg~~~~~~~-----~~~~-~~~~~---~~~~d~vi~GHtH~~~~~~-~~------~~~~inpGs~~~ 132 (155)
T cd00841 74 GGKRIFLTHGHLYGVKN-----GLDR-LYLAK---EGGADVVLYGHTHIPVIEK-IG------GVLLLNPGSLSL 132 (155)
T ss_pred CCEEEEEECCccccccc-----chhh-hhhhh---hcCCCEEEECcccCCccEE-EC------CEEEEeCCCccC
Confidence 35678899988765421 1111 22222 3478999999999643322 11 225566676553
No 43
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=97.35 E-value=0.00057 Score=65.52 Aligned_cols=60 Identities=15% Similarity=0.323 Sum_probs=37.2
Q ss_pred CCeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCCcceeeecCCCCCcccceEEEecCCCC
Q 001892 565 RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGA 639 (999)
Q Consensus 565 ~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHhYsR~~~~~~~G~~~~~~lIVsGGGGA 639 (999)
+...|+++|.+.+.... ..+.+...+. ..+++++++||+|..+..... +..++..|+-+.
T Consensus 80 ~~~~i~~~H~~~~~~~~-----~~~~~~~~~~---~~~~~~~~~GH~H~~~~~~~~-------~~~~~~~Gs~~~ 139 (156)
T PF12850_consen 80 DGFKILLSHGHPYDVQW-----DPAELREILS---RENVDLVLHGHTHRPQVFKIG-------GIHVINPGSIGG 139 (156)
T ss_dssp TTEEEEEESSTSSSSTT-----THHHHHHHHH---HTTSSEEEESSSSSEEEEEET-------TEEEEEE-GSSS
T ss_pred cCCeEEEECCCCccccc-----Chhhhhhhhc---ccCCCEEEcCCcccceEEEEC-------CEEEEECCcCCC
Confidence 47889999988876431 1222222222 569999999999986554411 236677776553
No 44
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=97.34 E-value=0.00048 Score=74.15 Aligned_cols=164 Identities=20% Similarity=0.297 Sum_probs=76.0
Q ss_pred CccEEEEcccccCCCCChhhhhhccccchhhhcCCCCCCcccccccCCCCCCC----------CC-cccccCCCCcEEEe
Q 001892 422 RGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPS----------GV-PELKQYDGPQCYII 490 (999)
Q Consensus 422 RgdfLVlgGDlvYP~gs~e~Y~~Rfv~PYe~Al~~~~~~~~e~~~~~kpe~p~----------~~-~~l~~~~gP~vfAI 490 (999)
++|.|++.||+.=+.+..++|++--.+- + .| +|++.-+ .. ..|.+ -+++++.|
T Consensus 32 ~~D~~v~~G~~~~~~a~~~e~~~a~~~~------r----~p-----~k~~i~~e~~~~~e~~~~ff~~L~~-~~~p~~~v 95 (255)
T PF14582_consen 32 GPDAVVFVGDLLKAEARSDEYERAQEEQ------R----EP-----DKSEINEEECYDSEALDKFFRILGE-LGVPVFVV 95 (255)
T ss_dssp T-SEEEEES-SS-TCHHHHHHHHHHHTT-------------------THHHHHHHHHHHHHHHHHHHHHHC-C-SEEEEE
T ss_pred CCCEEEEeccccccchhhhHHHHHhhhc------c----Cc-----chhhhhhhhhhhHHHHHHHHHHHHh-cCCcEEEe
Confidence 5899999999988877777887211000 0 00 0111000 00 01223 34669999
Q ss_pred CCCCCCCCChhHHHHHhhcccC-CCcccCCCCcceEEEECCCcEEEEEEecCCCCC--CC--H-----HHHHHHHHHHHh
Q 001892 491 PGNHDWFDGLNTFMRFICHKSW-LGGWFMPQKKSYFALQLPKGWWVFGLDLALHCD--ID--V-----YQFKFFAELVKE 560 (999)
Q Consensus 491 PGNHDWyDGL~aF~R~F~~r~~-lgGWrmpQ~~SYFAlrLP~~wWLlGLDsql~gd--ID--~-----~Q~~wFe~ll~~ 560 (999)
|||||=+ +..|+|.-..... ....++-++ |+|-.+-+ +-++|+.--...+ .+ . .-.+|-.+.+.+
T Consensus 96 PG~~Dap--~~~~lr~a~~~e~v~p~~~~vH~-sf~~~~g~--y~v~G~GGeI~~~~~~~~~~LrYP~weaey~lk~l~e 170 (255)
T PF14582_consen 96 PGNMDAP--ERFFLREAYNAEIVTPHIHNVHE-SFFFWKGE--YLVAGMGGEITDDQREEEFKLRYPAWEAEYSLKFLRE 170 (255)
T ss_dssp --TTS-S--HHHHHHHHHHCCCC-TTEEE-CT-CEEEETTT--EEEEEE-SEEESSS-BCSSS-EEEHHHHHHHHGGGGG
T ss_pred cCCCCch--HHHHHHHHhccceeccceeeeee-eecccCCc--EEEEecCccccCCCccccccccchHHHHHHHHHHHHh
Confidence 9999953 2245554332111 122333344 33333222 4578875332211 11 0 123344444433
Q ss_pred hcCCCCeEEEEecCCC-CcccccccccchhhHHHHHhhhhCCceeEEEcCccCC
Q 001892 561 QVGERDSVIIMTHEPN-WLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHH 613 (999)
Q Consensus 561 ~v~~~d~VIL~tHeP~-w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHh 613 (999)
+. +.+.|++.|-|+ .-.+.. +...+.++++|+++ +.+++|+||+|-
T Consensus 171 -lk-~~r~IlLfhtpPd~~kg~~--h~GS~~V~dlIk~~---~P~ivl~Ghihe 217 (255)
T PF14582_consen 171 -LK-DYRKILLFHTPPDLHKGLI--HVGSAAVRDLIKTY---NPDIVLCGHIHE 217 (255)
T ss_dssp -CT-SSEEEEEESS-BTBCTCTB--TTSBHHHHHHHHHH-----SEEEE-SSS-
T ss_pred -cc-cccEEEEEecCCccCCCcc--cccHHHHHHHHHhc---CCcEEEeccccc
Confidence 33 458999999999 222211 12346788899998 899999999995
No 45
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=97.30 E-value=0.0016 Score=69.04 Aligned_cols=18 Identities=28% Similarity=0.257 Sum_probs=14.1
Q ss_pred CCceeEEEcCccCCccee
Q 001892 600 KGRCKLRIAGDMHHYMRH 617 (999)
Q Consensus 600 ~~RV~LvLAGHiHhYsR~ 617 (999)
++++++.+.||+|.-..+
T Consensus 185 ~~~~~~~i~GH~H~~~~~ 202 (241)
T PRK05340 185 KHGVDTLIHGHTHRPAIH 202 (241)
T ss_pred HhCCCEEEECcccCccee
Confidence 458999999999975444
No 46
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=97.28 E-value=0.0029 Score=66.81 Aligned_cols=34 Identities=24% Similarity=0.219 Sum_probs=21.0
Q ss_pred CCceeEEEcCccCCcceeeecCCCCCcccceEEEecC
Q 001892 600 KGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGC 636 (999)
Q Consensus 600 ~~RV~LvLAGHiHhYsR~~~~~~~G~~~~~~lIVsGG 636 (999)
+.++++.++||+|.=+.+.-.. +|. ...++|.|.
T Consensus 183 ~~~~~~~i~GHtH~~~~~~~~~-~~~--~~~~~~lgd 216 (231)
T TIGR01854 183 RYGVDRLIHGHTHRPAIHPLQA-DGQ--PATRIVLGD 216 (231)
T ss_pred HcCCCEEEECCccCcceeeccc-CCC--ccEEEEECC
Confidence 4589999999999655443221 111 225777765
No 47
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=97.23 E-value=0.0041 Score=65.18 Aligned_cols=49 Identities=22% Similarity=0.287 Sum_probs=37.1
Q ss_pred CCCeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCCcceeeec
Q 001892 564 ERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYV 620 (999)
Q Consensus 564 ~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHhYsR~~~~ 620 (999)
+.+.+|||+|-|+.+.+. +...+.+++|+ +||+..+-||+|.-.|-.+.
T Consensus 157 ~~~~fivM~HYPP~s~~~-----t~~~~sevlee---~rv~~~lyGHlHgv~~p~~~ 205 (230)
T COG1768 157 GVSKFIVMTHYPPFSDDG-----TPGPFSEVLEE---GRVSKCLYGHLHGVPRPNIG 205 (230)
T ss_pred CcCeEEEEEecCCCCCCC-----CCcchHHHHhh---cceeeEEeeeccCCCCCCCC
Confidence 358999999999988753 34445556665 59999999999987765433
No 48
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=97.13 E-value=0.0097 Score=64.19 Aligned_cols=122 Identities=18% Similarity=0.173 Sum_probs=61.8
Q ss_pred EEeCCCCCCCCChhHHHHHhhccc--CC-Cccc-----CCCCcceEEEECCCc--EEEEEEecCCCC---------CC--
Q 001892 488 YIIPGNHDWFDGLNTFMRFICHKS--WL-GGWF-----MPQKKSYFALQLPKG--WWVFGLDLALHC---------DI-- 546 (999)
Q Consensus 488 fAIPGNHDWyDGL~aF~R~F~~r~--~l-gGWr-----mpQ~~SYFAlrLP~~--wWLlGLDsql~g---------dI-- 546 (999)
++.+||||+.-|.+.+.+..-+-. ++ +... .|.-.+|..++...| .=++|+=+.... ++
T Consensus 86 ~~~lGNHe~d~g~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~ 165 (277)
T cd07410 86 AGTLGNHEFNYGLDYLDKVIKQANFPVLSANVIDADTGEPFLKPYVILERDVGVKVGIIGLTTPQIPNWEKPNLIGGLKF 165 (277)
T ss_pred EEeecccCcccCHHHHHHHHHhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCCEEEEEecCCcccccccCcccCCCcEE
Confidence 556799997667776666543211 11 1111 122235767777613 334555322110 11
Q ss_pred -CHH-HHHHHHHHHHhhcCCCCeEEEEecCCCCcccccccccc-hhhHHHHHhhhhCCceeEEEcCccCCcc
Q 001892 547 -DVY-QFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVS-GKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (999)
Q Consensus 547 -D~~-Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~t-~~~l~~Lle~vL~~RV~LvLAGHiHhYs 615 (999)
|.. ..+...+.+++ +.-|-||+++|-+.-.... .... .....++.+++ ..++++|+||.|...
T Consensus 166 ~d~~~~~~~~v~~lr~--~~~D~IIvl~H~g~~~~~~--~~~~~~~~~~~la~~~--~~vD~IlgGHsH~~~ 231 (277)
T cd07410 166 TDPVETAKKYVPKLRA--EGADVVVVLAHGGFERDLE--ESLTGENAAYELAEEV--PGIDAILTGHQHRRF 231 (277)
T ss_pred cCHHHHHHHHHHHHHH--cCCCEEEEEecCCcCCCcc--cccCCccHHHHHHhcC--CCCcEEEeCCCcccc
Confidence 211 12233333332 3458999999987653311 0111 12233444554 479999999999754
No 49
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=97.12 E-value=0.0018 Score=64.04 Aligned_cols=40 Identities=10% Similarity=-0.112 Sum_probs=22.8
Q ss_pred CCeEEEEecCCCCcccccccccchhhHHHHHhhhh-CCceeEEEcCccCC
Q 001892 565 RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYL-KGRCKLRIAGDMHH 613 (999)
Q Consensus 565 ~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL-~~RV~LvLAGHiHh 613 (999)
++..|+++|-..+... . ..+.+ +... ..+++++++||+|.
T Consensus 77 ~g~~i~l~Hg~~~~~~---~--~~~~l----~~~~~~~~~d~vi~GHtH~ 117 (158)
T TIGR00040 77 EGIDFGLVHGDLVYPR---G--DLLVL----EYLAKELGVDVLIFGHTHI 117 (158)
T ss_pred CCEEEEEEeCcccccC---C--CHHHH----HHHHhccCCCEEEECCCCC
Confidence 3567888886543221 0 11112 2221 35789999999995
No 50
>cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain. PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF
Probab=97.01 E-value=0.0036 Score=65.00 Aligned_cols=25 Identities=12% Similarity=-0.065 Sum_probs=19.8
Q ss_pred CCcceEEEECCCcEEEEEEecCCCC
Q 001892 520 QKKSYFALQLPKGWWVFGLDLALHC 544 (999)
Q Consensus 520 Q~~SYFAlrLP~~wWLlGLDsql~g 544 (999)
+..-|+.++++....|+.||+...-
T Consensus 145 ~~~~y~~~~~G~~~~~~~lD~R~~R 169 (228)
T cd07389 145 RGGIYRSFRFGDLVDLILLDTRTYR 169 (228)
T ss_pred CceEEEEEecCCcceEEEEeccccc
Confidence 3457999999987689999986654
No 51
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=96.90 E-value=0.014 Score=63.76 Aligned_cols=51 Identities=8% Similarity=0.091 Sum_probs=34.4
Q ss_pred CCeEEEEecCCCCcccccccc------------------cchhhHHHHHhhhhCCceeEEEcCccCC-cceee
Q 001892 565 RDSVIIMTHEPNWLLDWYFNN------------------VSGKNVKHLICDYLKGRCKLRIAGDMHH-YMRHS 618 (999)
Q Consensus 565 ~d~VIL~tHeP~w~~~~~~~~------------------~t~~~l~~Lle~vL~~RV~LvLAGHiHh-YsR~~ 618 (999)
++.=|++||+|+..-..+.+. .....++++++++ |.+..+|||.|. |++..
T Consensus 164 ~~vDIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~l---kPryhf~gH~H~~f~~~~ 233 (262)
T cd00844 164 QPIDIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHL---KPRYWFSAHLHVKFAALV 233 (262)
T ss_pred CCCcEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHHHHh---CCCEEEEecCCcccceec
Confidence 356799999999876443321 1123345666666 899999999996 66543
No 52
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=96.83 E-value=0.023 Score=61.19 Aligned_cols=112 Identities=13% Similarity=0.078 Sum_probs=59.0
Q ss_pred EeCCCCCCCCChhHHHHHhhccc--CCC------cccCCCCcceEEEECCC-cEEEEEEecCCCCCCC----------HH
Q 001892 489 IIPGNHDWFDGLNTFMRFICHKS--WLG------GWFMPQKKSYFALQLPK-GWWVFGLDLALHCDID----------VY 549 (999)
Q Consensus 489 AIPGNHDWyDGL~aF~R~F~~r~--~lg------GWrmpQ~~SYFAlrLP~-~wWLlGLDsql~gdID----------~~ 549 (999)
|+-||||+.-|.+.+.+.+.+-. +++ +...|.-.+|..++... ..=++|+.+....... ..
T Consensus 87 a~~GNHefd~g~~~l~~~~~~~~~~~l~aN~~~~~~~~~~~~~~~i~~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
T cd07411 87 AMVGHWEFTYGPERVRELFGRLNWPFLAANVYDDEAGERVFPPYRIKEVGGVKIGVIGQTFPYVPIANPPRFTPGLTFGI 166 (264)
T ss_pred EEecccccccCHHHHHHHHhhCCCCEEEEEEEeCCCCCcccCCEEEEEECCEEEEEEEeccCCcccccCcCCCCCcEECC
Confidence 33399997768777666554321 111 01112222465555532 2556777654221110 11
Q ss_pred HHHHHHHHHHh--hcCCCCeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCCc
Q 001892 550 QFKFFAELVKE--QVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHY 614 (999)
Q Consensus 550 Q~~wFe~ll~~--~v~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHhY 614 (999)
..+.+.+.+.+ +.+..|-||+++|-+.-. + .++.+++ ..++++|+||.|..
T Consensus 167 ~~~~~~~~~~~~~~~~~~D~iI~l~H~g~~~----------~--~~la~~~--~~iDlilgGH~H~~ 219 (264)
T cd07411 167 REEELQEVVVKLRREEGVDVVVLLSHNGLPV----------D--VELAERV--PGIDVILSGHTHER 219 (264)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEecCCchh----------h--HHHHhcC--CCCcEEEeCccccc
Confidence 23344443221 124568999999997521 0 1233443 57999999999964
No 53
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=96.47 E-value=0.083 Score=60.12 Aligned_cols=164 Identities=17% Similarity=0.121 Sum_probs=85.3
Q ss_pred CCccEEEEcccccCCCCChhhhhhccccchhhhcCCCCCCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCCh
Q 001892 421 PRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGL 500 (999)
Q Consensus 421 PRgdfLVlgGDlvYP~gs~e~Y~~Rfv~PYe~Al~~~~~~~~e~~~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL 500 (999)
.+||+||++||+++- -+..++++-+..-..- .-+ .+.++-|+.||||=-..+
T Consensus 99 E~PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP--------------------------~I~-~~IPwA~~lGNHDdes~l 150 (379)
T KOG1432|consen 99 EKPDLVVFTGDNIFG-HSTQDAATSLMKAVAP--------------------------AID-RKIPWAAVLGNHDDESDL 150 (379)
T ss_pred cCCCEEEEeCCcccc-cccHhHHHHHHHHhhh--------------------------Hhh-cCCCeEEEeccccccccc
Confidence 468999999999997 3334555433222211 122 345599999999965444
Q ss_pred h-HHHHHhhccc--------CCCcccCCCC--cceEEEECC--------C--cEEEEEEecCCC----------CCCCHH
Q 001892 501 N-TFMRFICHKS--------WLGGWFMPQK--KSYFALQLP--------K--GWWVFGLDLALH----------CDIDVY 549 (999)
Q Consensus 501 ~-aF~R~F~~r~--------~lgGWrmpQ~--~SYFAlrLP--------~--~wWLlGLDsql~----------gdID~~ 549 (999)
+ ..++-|...- ...|+-..+. ..| -++++ . ..=+.-||+... +.|...
T Consensus 151 tr~ql~~~i~~lP~s~~~v~p~dg~~~~~~g~gny-n~~i~~~~ds~~~~~sv~~lyfld~~~~~s~~~~~~~Ydwik~s 229 (379)
T KOG1432|consen 151 TRLQLMKFISKLPYSLSQVNPPDGHMYIIDGFGNY-NLQIEGAIDSELENKSVFNLYFLDSSSYTSVPPLLPGYDWIKES 229 (379)
T ss_pred CHHHHHHHHhcCCCccccCCCcccceeeeecccce-EEEeccCCCcccccCceeeEEEEecCCcccccccccCccchhhh
Confidence 3 2233222211 1123322121 233 44443 1 133667777532 245678
Q ss_pred HHHHHHHHHHh----hcCCCC-eEEEEecCCCCcccccccc--------c-c--hhhHHHHHhhhh-CCceeEEEcCccC
Q 001892 550 QFKFFAELVKE----QVGERD-SVIIMTHEPNWLLDWYFNN--------V-S--GKNVKHLICDYL-KGRCKLRIAGDMH 612 (999)
Q Consensus 550 Q~~wFe~ll~~----~v~~~d-~VIL~tHeP~w~~~~~~~~--------~-t--~~~l~~Lle~vL-~~RV~LvLAGHiH 612 (999)
|.+|+++.-.+ ....++ +=+..-|-|.=-.-....+ + + .......++.+- +.+|+.+++||.|
T Consensus 230 q~~wl~~~~~~~~~~~~~~~P~p~La~~HIP~~E~~~~~~~tp~~g~~~E~~~~~~~~sg~~~~L~~r~~Vk~vf~GHdH 309 (379)
T KOG1432|consen 230 QLEWLSDTSKEFKEPNSKYNPQPGLAFFHIPLPEFLELESKTPLIGVFQEGVSASKHNSGFLTTLVNRGNVKGVFCGHDH 309 (379)
T ss_pred hHHHHhhhhhhhhcccCccCCCCceEEEEcccHHHhhccCCCcccceeeccccccccccHHHHHHHhccCcceEEecccc
Confidence 99999997621 112233 6677778775332221110 0 0 001112223332 5799999999999
Q ss_pred C
Q 001892 613 H 613 (999)
Q Consensus 613 h 613 (999)
.
T Consensus 310 v 310 (379)
T KOG1432|consen 310 V 310 (379)
T ss_pred c
Confidence 6
No 54
>PHA02546 47 endonuclease subunit; Provisional
Probab=96.40 E-value=0.02 Score=64.32 Aligned_cols=13 Identities=31% Similarity=0.590 Sum_probs=11.2
Q ss_pred CcEEEeCCCCCCC
Q 001892 485 PQCYIIPGNHDWF 497 (999)
Q Consensus 485 P~vfAIPGNHDWy 497 (999)
.++++||||||.+
T Consensus 77 i~v~~I~GNHD~~ 89 (340)
T PHA02546 77 ITLHVLVGNHDMY 89 (340)
T ss_pred CeEEEEccCCCcc
Confidence 4599999999975
No 55
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=96.39 E-value=0.012 Score=66.59 Aligned_cols=52 Identities=27% Similarity=0.433 Sum_probs=32.9
Q ss_pred CccEEEEcccccCCCCChhhhh-hccccchhhhcCCCCCCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCCh
Q 001892 422 RGDVLLIGGDLAYPNPSAFTYE-RRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGL 500 (999)
Q Consensus 422 RgdfLVlgGDlvYP~gs~e~Y~-~Rfv~PYe~Al~~~~~~~~e~~~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL 500 (999)
+.|+||++|| +|..+....+. .++.+-++. +++ .+.++|+|+||||.-+++
T Consensus 40 ~vD~vliAGD-lFd~~~Ps~~a~~~~~~~l~~--------------------------l~~-~~Ipv~~I~GNHD~~~~~ 91 (390)
T COG0420 40 KVDFVLIAGD-LFDTNNPSPRALKLFLEALRR--------------------------LKD-AGIPVVVIAGNHDSPSRL 91 (390)
T ss_pred cCCEEEEccc-cccCCCCCHHHHHHHHHHHHH--------------------------hcc-CCCcEEEecCCCCchhcc
Confidence 4699999999 57776554443 223222221 222 245599999999987664
Q ss_pred h
Q 001892 501 N 501 (999)
Q Consensus 501 ~ 501 (999)
.
T Consensus 92 ~ 92 (390)
T COG0420 92 S 92 (390)
T ss_pred c
Confidence 4
No 56
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=96.23 E-value=0.024 Score=58.23 Aligned_cols=16 Identities=19% Similarity=0.399 Sum_probs=12.9
Q ss_pred CCceeEEEcCccCCcc
Q 001892 600 KGRCKLRIAGDMHHYM 615 (999)
Q Consensus 600 ~~RV~LvLAGHiHhYs 615 (999)
+.+++++++||+|.-.
T Consensus 104 ~~~~dvii~GHTH~p~ 119 (178)
T cd07394 104 QLDVDILISGHTHKFE 119 (178)
T ss_pred hcCCCEEEECCCCcce
Confidence 3578999999999643
No 57
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=96.19 E-value=0.017 Score=62.27 Aligned_cols=17 Identities=35% Similarity=0.511 Sum_probs=13.8
Q ss_pred cEEEeCCCCCCCCChhH
Q 001892 486 QCYIIPGNHDWFDGLNT 502 (999)
Q Consensus 486 ~vfAIPGNHDWyDGL~a 502 (999)
++++|+||||..+.+..
T Consensus 77 ~v~~i~GNHD~~~~~~~ 93 (253)
T TIGR00619 77 PIVVISGNHDSAQRLSA 93 (253)
T ss_pred eEEEEccCCCChhhccc
Confidence 49999999998776543
No 58
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=96.13 E-value=0.12 Score=56.47 Aligned_cols=117 Identities=14% Similarity=0.173 Sum_probs=61.2
Q ss_pred CCcEEEeCCCCCCCCChhHHHHHhhccc--CCC-ccc--------CCCCcceEEEECCC-cEEEEEEecCCCCC------
Q 001892 484 GPQCYIIPGNHDWFDGLNTFMRFICHKS--WLG-GWF--------MPQKKSYFALQLPK-GWWVFGLDLALHCD------ 545 (999)
Q Consensus 484 gP~vfAIPGNHDWyDGL~aF~R~F~~r~--~lg-GWr--------mpQ~~SYFAlrLP~-~wWLlGLDsql~gd------ 545 (999)
+..+. .+||||+--|.+.+.+.+-+-. +++ +.. .+.-.+|-.++... ..-++|+-+.....
T Consensus 82 g~D~~-~lGNHefd~G~~~l~~~~~~~~~p~l~aNv~~~~~~~~~~~~~~p~~i~~~~G~kIgviG~~~~~~~~~~~~~~ 160 (281)
T cd07409 82 GYDAM-TLGNHEFDDGVEGLAPFLNNLKFPVLSANIDTSNEPPLLDGLLKPSTILTVGGEKIGIIGYTTPDTTELSSPGG 160 (281)
T ss_pred CCCEE-EeccccccCCHHHHHHHHHhCCCCEEEEeeecCCCccccccccCCeEEEEECCEEEEEEEEecCcccccccCCC
Confidence 34444 4699999888887776554322 121 111 11123464554422 25577775543211
Q ss_pred -CC-HHHHHHHHHHHHh-hcCCCCeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCCcc
Q 001892 546 -ID-VYQFKFFAELVKE-QVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (999)
Q Consensus 546 -ID-~~Q~~wFe~ll~~-~v~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHhYs 615 (999)
+. ....+-.++.+++ +.+.-|-||+++|-..= ...++.+++ ..++++++||.|...
T Consensus 161 ~~~~~d~~~~~~~~v~~lr~~~~D~II~l~H~G~~------------~d~~la~~~--~giD~IiggH~H~~~ 219 (281)
T cd07409 161 KVKFLDEIEAAQKEADKLKAQGVNKIIALSHSGYE------------VDKEIARKV--PGVDVIVGGHSHTFL 219 (281)
T ss_pred ceEECCHHHHHHHHHHHHHhcCCCEEEEEeccCch------------hHHHHHHcC--CCCcEEEeCCcCccc
Confidence 11 0112233343321 11235889999998641 112344554 579999999999753
No 59
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=96.13 E-value=0.041 Score=65.91 Aligned_cols=97 Identities=16% Similarity=0.251 Sum_probs=64.2
Q ss_pred CCCCcceEEEECCCcEEEEEEecCCCC---------CCC-HHHHHHHHHHHHhhcCCCCeEEEEecCCCCcccccccccc
Q 001892 518 MPQKKSYFALQLPKGWWVFGLDLALHC---------DID-VYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVS 587 (999)
Q Consensus 518 mpQ~~SYFAlrLP~~wWLlGLDsql~g---------dID-~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~t 587 (999)
+-+++.||+.....|-.++.|++.-.. ..| .+|++||..+++++-..++.|=+++|-|.=.... ..+-
T Consensus 301 t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~~L~~ae~~GekVhil~HIPpG~~~c-~~~w- 378 (577)
T KOG3770|consen 301 TFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVDQLQEAESAGEKVHILGHIPPGDGVC-LEGW- 378 (577)
T ss_pred hhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHHhhHHHHHHHHHHhcCCEEEEEEeeCCCCcch-hhhh-
Confidence 335667999999999999999986321 123 4789999999986667789999999999854211 1111
Q ss_pred hhhHHHHHhhhhCCceeEEEcCccC-Cccee
Q 001892 588 GKNVKHLICDYLKGRCKLRIAGDMH-HYMRH 617 (999)
Q Consensus 588 ~~~l~~Lle~vL~~RV~LvLAGHiH-hYsR~ 617 (999)
..+--..+.++ ..-+.-.+-||.| ...|.
T Consensus 379 s~~f~~iv~r~-~~tI~gqf~GH~h~d~f~v 408 (577)
T KOG3770|consen 379 SINFYRIVNRF-RSTIAGQFYGHTHIDEFRV 408 (577)
T ss_pred hHHHHHHHHHH-HHhhhhhccccCcceeEEE
Confidence 11121222333 3446678999999 44443
No 60
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=95.92 E-value=0.28 Score=52.76 Aligned_cols=122 Identities=20% Similarity=0.228 Sum_probs=62.0
Q ss_pred CCcEEEeCCCCCCCCChhHHHHHhhccc--CC-Cccc-----CCCCcceEEEECCCc--EEEEEEecCCC------CC--
Q 001892 484 GPQCYIIPGNHDWFDGLNTFMRFICHKS--WL-GGWF-----MPQKKSYFALQLPKG--WWVFGLDLALH------CD-- 545 (999)
Q Consensus 484 gP~vfAIPGNHDWyDGL~aF~R~F~~r~--~l-gGWr-----mpQ~~SYFAlrLP~~--wWLlGLDsql~------gd-- 545 (999)
+..+. .+||||+.-|++.+.+..-+-. ++ +... .+.-.+|-.++...| .=++|+-+... ..
T Consensus 70 g~d~~-~~GNHefd~G~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~~~~~~~~~~~~~~~ 148 (257)
T cd07408 70 GYDAV-TPGNHEFDYGLDRLKELSKEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLTTPETATKTHPKNVK 148 (257)
T ss_pred CCcEE-ccccccccCCHHHHHHHHhhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeecCcCcccccCccccC
Confidence 44454 5799998778887776553321 12 1111 111124655566524 34566654211 11
Q ss_pred -C---CHH--HHHHHHHHHHhhcCCCCeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCCcce
Q 001892 546 -I---DVY--QFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMR 616 (999)
Q Consensus 546 -I---D~~--Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHhYsR 616 (999)
+ |.. -.++..+.++ .+.-|-||+++|.+...... ..+..++.++. ..++++|+||.|....
T Consensus 149 ~~~~~d~~~~~~~~~v~~l~--~~~~D~iIvl~H~G~~~~~~------~~~~~~la~~~--~giDvIigGH~H~~~~ 215 (257)
T cd07408 149 DVTFEDPIEEAKKVIVAALK--AKGADVIVALGHLGVDRTSS------PWTSTELAANV--TGIDLIIDGHSHTTIE 215 (257)
T ss_pred CcEEecHHHHHHHHHHHHHH--hCCCCEEEEEeCcCcCCCCC------CccHHHHHHhC--CCceEEEeCCCccccc
Confidence 1 211 1122111121 23458999999988754311 11122333332 4799999999997544
No 61
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=95.84 E-value=0.01 Score=68.44 Aligned_cols=23 Identities=30% Similarity=0.450 Sum_probs=17.7
Q ss_pred cEEEeCCCCCCCCChhHHHHHhh
Q 001892 486 QCYIIPGNHDWFDGLNTFMRFIC 508 (999)
Q Consensus 486 ~vfAIPGNHDWyDGL~aF~R~F~ 508 (999)
++++|+||||.+..+....+.+.
T Consensus 76 ~v~~I~GNHD~~~~l~~~~~~l~ 98 (407)
T PRK10966 76 QLVVLAGNHDSVATLNESRDLLA 98 (407)
T ss_pred cEEEEcCCCCChhhhhhHHHHHH
Confidence 49999999999888765555443
No 62
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=95.71 E-value=0.11 Score=60.27 Aligned_cols=41 Identities=15% Similarity=0.135 Sum_probs=26.4
Q ss_pred CeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCCcc
Q 001892 566 DSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (999)
Q Consensus 566 d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHhYs 615 (999)
..-|++.|....... .+ ...-+++++...++++.||+|..+
T Consensus 201 ~fnIlv~Hq~~~~~~-----~~----~~ipe~llp~~fDYValGHiH~~~ 241 (405)
T TIGR00583 201 WFNLLVLHQNHAAHT-----ST----SFLPESFIPDFFDLVIWGHEHECL 241 (405)
T ss_pred ceEEEEeCceecCCC-----Cc----ccCchhhhhccCcEEEeccccccc
Confidence 457999999863221 11 011245556679999999999744
No 63
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=95.48 E-value=0.018 Score=58.97 Aligned_cols=30 Identities=17% Similarity=0.078 Sum_probs=20.9
Q ss_pred CCceeEEEcCccCCcceeeecCCCCCcccceEEEecC
Q 001892 600 KGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGC 636 (999)
Q Consensus 600 ~~RV~LvLAGHiHhYsR~~~~~~~G~~~~~~lIVsGG 636 (999)
..+++++++||+|.-...... ...++++|+
T Consensus 187 ~~~~~~~i~GH~H~~~~~~~~-------~~~~~n~G~ 216 (217)
T cd07398 187 RKGVDGVICGHTHRPALHELD-------GKLYINLGD 216 (217)
T ss_pred hcCCCEEEECCCCCCCeEEEC-------CEEEEECCC
Confidence 568999999999976554422 125677764
No 64
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.39 E-value=0.051 Score=59.06 Aligned_cols=30 Identities=20% Similarity=0.196 Sum_probs=20.7
Q ss_pred CCceeEEEcCccCCcceeeecCCCCCcccceEEEecC
Q 001892 600 KGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGC 636 (999)
Q Consensus 600 ~~RV~LvLAGHiHhYsR~~~~~~~G~~~~~~lIVsGG 636 (999)
++.|+.++.||+|+-+-+. .+ +..+||.|.
T Consensus 185 ~~~vd~vI~GH~Hr~ai~~-i~------~~~yi~lGd 214 (237)
T COG2908 185 RHGVDGVIHGHTHRPAIHN-IP------GITYINLGD 214 (237)
T ss_pred HcCCCEEEecCcccHhhcc-CC------CceEEecCc
Confidence 6789999999999743322 11 236788775
No 65
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=94.83 E-value=0.53 Score=61.19 Aligned_cols=188 Identities=15% Similarity=0.103 Sum_probs=94.7
Q ss_pred CCeEEEEEeecCCCCCCchHHHHHhcCcccccccCCCCcccCCccEEEE-cccccCCCCChhhhhhccccchhhhcCCCC
Q 001892 380 EDLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLI-GGDLAYPNPSAFTYERRLFRPFEYALQPPP 458 (999)
Q Consensus 380 ~~lwFd~VaDtGDG~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLVl-gGDlvYP~gs~e~Y~~Rfv~PYe~Al~~~~ 458 (999)
.++.+-.+.|+=.......+++.++.+.. ...+++|++ +||.. .|+...-..+- +|.-.+|
T Consensus 659 ~~l~Il~~nD~Hg~l~g~~r~~~~i~~~r-----------~~~~~~l~ld~GD~~--~gs~~~~~~~g-~~~~~~l---- 720 (1163)
T PRK09419 659 WELTILHTNDFHGHLDGAAKRVTKIKEVK-----------EENPNTILVDAGDVY--QGSLYSNLLKG-LPVLKMM---- 720 (1163)
T ss_pred eEEEEEEEeecccCCCCHHHHHHHHHHHH-----------hhCCCeEEEecCCCC--CCcchhhhcCC-hHHHHHH----
Confidence 45999999999743344556777666532 112455655 99955 44431111111 2222222
Q ss_pred CCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCChhHHHHHhhccc--------------CCCc---c-cCCC
Q 001892 459 WYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICHKS--------------WLGG---W-FMPQ 520 (999)
Q Consensus 459 ~~~~e~~~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDGL~aF~R~F~~r~--------------~lgG---W-rmpQ 520 (999)
+. -+. -.+++||||+.-|.+.+.+...+.. +++. + ..++
T Consensus 721 ---------------------n~-lg~-d~~~~GNHEfd~g~~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~ 777 (1163)
T PRK09419 721 ---------------------KE-MGY-DASTFGNHEFDWGPDVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGK 777 (1163)
T ss_pred ---------------------hC-cCC-CEEEecccccccChHHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCc
Confidence 11 123 3559999999988887777664311 1111 1 1112
Q ss_pred C----cceEEEECCCc--EEEEEEecCCC------C---CCC-HHHHHHHHHHHHh--hcCCCCeEEEEecCCCCccccc
Q 001892 521 K----KSYFALQLPKG--WWVFGLDLALH------C---DID-VYQFKFFAELVKE--QVGERDSVIIMTHEPNWLLDWY 582 (999)
Q Consensus 521 ~----~SYFAlrLP~~--wWLlGLDsql~------g---dID-~~Q~~wFe~ll~~--~v~~~d~VIL~tHeP~w~~~~~ 582 (999)
+ ..|..++.. | .=++|+-+... . .+. ....+-.++.+++ +.+.-|-||+++|...-....
T Consensus 778 ~~~~~~py~I~e~~-G~kIgiiGltt~~~~~~~~p~~~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~~~d~~- 855 (1163)
T PRK09419 778 LVSWAKPYILVEVN-GKKVGFIGLTTPETAYKTSPGNVKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGSNQDRT- 855 (1163)
T ss_pred cccccCCEEEEEEC-CEEEEEEEecccccccccCCCCcCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCcccccc-
Confidence 1 246555543 3 33566643210 1 110 0112223333221 013458999999998643211
Q ss_pred ccccchhhHHHHHhhhhCCceeEEEcCccCCcc
Q 001892 583 FNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (999)
Q Consensus 583 ~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHhYs 615 (999)
.......++.+++ ..++++|+||.|...
T Consensus 856 ---~~~~~~~~lA~~v--~gIDvIigGHsH~~~ 883 (1163)
T PRK09419 856 ---TGEITGLELAKKV--KGVDAIISAHTHTLV 883 (1163)
T ss_pred ---ccccHHHHHHHhC--CCCCEEEeCCCCccc
Confidence 0111223444554 359999999999754
No 66
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=94.49 E-value=1.4 Score=48.56 Aligned_cols=171 Identities=19% Similarity=0.223 Sum_probs=85.6
Q ss_pred EEEEeecCCCCCCchHHHHHhcCcccccccCCCCcccCCccEEEEcccccCCCCChhhhhhccccchhhhcCCCCCCccc
Q 001892 384 FDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPWYKKD 463 (999)
Q Consensus 384 Fd~VaDtGDG~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~e~Y~~Rfv~PYe~Al~~~~~~~~e 463 (999)
+-|+||. -|......++..+.+- +. .-..|+++.-||.+=.+ .. .. +|-..+
T Consensus 2 ilfigdi-~g~~G~~~~~~~l~~l--k~--------~~~~D~vi~NgEn~~gg-~g--l~----~~~~~~---------- 53 (255)
T cd07382 2 ILFIGDI-VGKPGRKAVKEHLPKL--KK--------EYKIDFVIANGENAAGG-KG--IT----PKIAKE---------- 53 (255)
T ss_pred EEEEEeC-CCHHHHHHHHHHHHHH--HH--------HCCCCEEEECCccccCC-CC--CC----HHHHHH----------
Confidence 4577776 4555555677666542 11 12478999999965432 11 10 111111
Q ss_pred ccccCCCCCCCCCcccccCCCCcEEEeCCCCCCCCC-hhHHHHHhhcccCCCccc--CCCCcceEEEECCCcEE--EEEE
Q 001892 464 HVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDG-LNTFMRFICHKSWLGGWF--MPQKKSYFALQLPKGWW--VFGL 538 (999)
Q Consensus 464 ~~~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWyDG-L~aF~R~F~~r~~lgGWr--mpQ~~SYFAlrLP~~wW--LlGL 538 (999)
|.+ -+..+..+ |||+|=.| +..++......-...... .|. +.|..++.. |.- ++++
T Consensus 54 ---------------L~~-~G~D~iTl-GNH~fD~gel~~~l~~~~~~l~~aN~~~~~pg-~~~~i~~~~-G~kIaVigl 114 (255)
T cd07382 54 ---------------LLS-AGVDVITM-GNHTWDKKEILDFIDEEPRLLRPANYPPGTPG-RGYGVVEVN-GKKIAVINL 114 (255)
T ss_pred ---------------HHh-cCCCEEEe-cccccCcchHHHHHhcCcCceEeeecCCCCCC-CCeEEEEEC-CEEEEEEEE
Confidence 122 34556666 99999666 333333221000011111 222 246666665 444 4444
Q ss_pred ecCC-CCCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCCc
Q 001892 539 DLAL-HCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHY 614 (999)
Q Consensus 539 Dsql-~gdID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHhY 614 (999)
-... ...++.| .+-.++++++....-|-+|+.+|--. +.+. .-+...+.++|++++.||+|.-
T Consensus 115 ~g~~~~~~~~~P-~~~~~~~v~~lk~~~D~IIV~~H~g~----------tsEk--~ala~~ldg~VdvIvGtHTHv~ 178 (255)
T cd07382 115 MGRVFMPPLDNP-FRAADELLEELKEEADIIFVDFHAEA----------TSEK--IALGWYLDGRVSAVVGTHTHVQ 178 (255)
T ss_pred ecccCCCcCCCH-HHHHHHHHHHHhcCCCEEEEEECCCC----------CHHH--HHHHHhCCCCceEEEeCCCCcc
Confidence 3111 1123333 33455555421223578999999732 1111 1122445789999999999974
No 67
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=93.97 E-value=0.029 Score=58.97 Aligned_cols=27 Identities=19% Similarity=0.155 Sum_probs=17.2
Q ss_pred cCCccEEEEcccccCCCCChhhhhhcc
Q 001892 420 LPRGDVLLIGGDLAYPNPSAFTYERRL 446 (999)
Q Consensus 420 lPRgdfLVlgGDlvYP~gs~e~Y~~Rf 446 (999)
.++.|.++++||++=-++...+--+.+
T Consensus 30 ~~~~d~lv~lGD~vdrG~~~~~vl~~l 56 (208)
T cd07425 30 IGGSTHLVQLGDIFDRGPDVIEILWLL 56 (208)
T ss_pred cCCCcEEEEECCCcCCCcCHHHHHHHH
Confidence 346789999999775455444333433
No 68
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=93.71 E-value=0.065 Score=54.04 Aligned_cols=36 Identities=17% Similarity=0.261 Sum_probs=24.0
Q ss_pred CCCeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCCccee
Q 001892 564 ERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRH 617 (999)
Q Consensus 564 ~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHhYsR~ 617 (999)
-+...|+++|.|..... . ..+.+++++||+|..+.-
T Consensus 105 ~~~~~i~l~H~~~~~~~-------~-----------~~~~d~vi~GHtH~~~~~ 140 (168)
T cd07390 105 IGGRRVYLSHYPILEWN-------G-----------LDRGSWNLHGHIHSNSPD 140 (168)
T ss_pred ECCEEEEEEeCCcccCC-------C-----------CCCCeEEEEeeeCCCCCC
Confidence 35688999997643210 0 236789999999975443
No 69
>PRK04036 DNA polymerase II small subunit; Validated
Probab=93.26 E-value=0.083 Score=62.70 Aligned_cols=53 Identities=19% Similarity=0.308 Sum_probs=29.3
Q ss_pred CCCeEEEEEeecCCCCCCchH--HHHHhcCcccccccCCCCcccCCccEEEEccccc
Q 001892 379 KEDLWFDFMADTGDGGNSSYS--VARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLA 433 (999)
Q Consensus 379 d~~lwFd~VaDtGDG~dStYa--VA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlv 433 (999)
+++.++.+++|+.=|.+.... ...++. .+.-..+++.....+.+.+|++||++
T Consensus 241 ~~~~~i~~ISDlHlgs~~~~~~~l~~li~--~L~g~~~~~~~~~~~~d~lVIaGDiv 295 (504)
T PRK04036 241 DEKVYAVFISDVHVGSKEFLEDAFEKFID--WLNGEVGNEEEIASRVKYLIIAGDLV 295 (504)
T ss_pred CCccEEEEEcccCCCCcchhHHHHHHHHH--HHhCCCccchhhhhcCCEEEEeCccc
Confidence 467899999999966543222 122211 11100000111245678999999988
No 70
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=92.88 E-value=0.086 Score=53.29 Aligned_cols=15 Identities=33% Similarity=0.324 Sum_probs=12.4
Q ss_pred CCccEEEEcccccCC
Q 001892 421 PRGDVLLIGGDLAYP 435 (999)
Q Consensus 421 PRgdfLVlgGDlvYP 435 (999)
.++|.|+++||+...
T Consensus 40 ~~~d~lii~GDl~~~ 54 (172)
T cd07391 40 YGPERLIILGDLKHS 54 (172)
T ss_pred cCCCEEEEeCccccc
Confidence 357899999999964
No 71
>PRK09453 phosphodiesterase; Provisional
Probab=92.79 E-value=0.15 Score=51.84 Aligned_cols=38 Identities=24% Similarity=0.210 Sum_probs=23.0
Q ss_pred EEEEEeecCCCCCCchHHHHHhcCcccccccCCCCcccCCccEEEEcccccC
Q 001892 383 WFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAY 434 (999)
Q Consensus 383 wFd~VaDtGDG~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvY 434 (999)
.+.+++|+=.. ..+..++++.-. ..++|.++++||++.
T Consensus 2 ri~viSD~Hg~---~~~~~~~l~~~~-----------~~~~d~ii~lGDi~~ 39 (182)
T PRK09453 2 KLMFASDTHGS---LPATEKALELFA-----------QSGADWLVHLGDVLY 39 (182)
T ss_pred eEEEEEeccCC---HHHHHHHHHHHH-----------hcCCCEEEEcccccc
Confidence 46788999843 223333333210 134789999999875
No 72
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=92.79 E-value=2.4 Score=47.13 Aligned_cols=85 Identities=14% Similarity=0.180 Sum_probs=45.9
Q ss_pred cceEEEECCCcEE--EEEEecCCCC---CC---C---HHHHHHHHHHHHhhcCCCCeEEEEecCCCCcccccccccchhh
Q 001892 522 KSYFALQLPKGWW--VFGLDLALHC---DI---D---VYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKN 590 (999)
Q Consensus 522 ~SYFAlrLP~~wW--LlGLDsql~g---dI---D---~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~t~~~ 590 (999)
.+|..++..+|.. ++|+=+.... .+ | ..|.+|+.+++++ +.-|-||+++|-..-... +....
T Consensus 136 ~~y~i~~~~~G~kIgiiGltt~~~~~~~~~~f~d~~~~~~~~~v~~~l~~--~~~DvIIvlsH~G~~~d~-----~~~~~ 208 (282)
T cd07407 136 SRYRKFTTKHGLRVLAFGFLFDFKGAANGVTVQPVADVVQEPWFQDAINN--EDVDLILVLGHMPVRDDA-----EFKVL 208 (282)
T ss_pred cceEEEEcCCCcEEEEEEEecccccCCCCcEEcCHHHHHHHHHHHHHHHh--cCCCEEEEEeCCCCCCCc-----cHHHH
Confidence 3576777754544 5666432211 11 2 2344577766652 346899999998875331 11111
Q ss_pred HHHHHhhhhCCceeEEEcCccCCc
Q 001892 591 VKHLICDYLKGRCKLRIAGDMHHY 614 (999)
Q Consensus 591 l~~Lle~vL~~RV~LvLAGHiHhY 614 (999)
...+ .+.++...++.|+||.|..
T Consensus 209 ~~~l-a~~~~~id~~Ii~GHsH~~ 231 (282)
T cd07407 209 HDAI-RKIFPDTPIQFLGGHSHVR 231 (282)
T ss_pred HHHH-HHhCCCCCEEEEeCCcccc
Confidence 2222 2322443448999999974
No 73
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=92.69 E-value=2.6 Score=46.45 Aligned_cols=50 Identities=18% Similarity=0.094 Sum_probs=29.7
Q ss_pred CCCeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCCcc
Q 001892 564 ERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (999)
Q Consensus 564 ~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHhYs 615 (999)
.-|-||+++|-........... .....++.+++....++++|+||.|...
T Consensus 173 ~~D~VI~lsH~G~~~~~~~~~~--~~~~~~lA~~~~~~giD~IigGHsH~~~ 222 (285)
T cd07405 173 KPDIVIAATHMGHYDNGEHGSN--APGDVEMARALPAGGLDLIVGGHSQDPV 222 (285)
T ss_pred CCCEEEEEecccccCCcccccc--CchHHHHHHhcCCCCCCEEEeCCCCccc
Confidence 4589999999987533211111 0111233334323579999999999754
No 74
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=92.68 E-value=3 Score=45.99 Aligned_cols=52 Identities=12% Similarity=0.156 Sum_probs=30.0
Q ss_pred CCCeEEEEecCCCCcccccccccc-hhhHHHHHhhhhCCceeEEEcCccCCcce
Q 001892 564 ERDSVIIMTHEPNWLLDWYFNNVS-GKNVKHLICDYLKGRCKLRIAGDMHHYMR 616 (999)
Q Consensus 564 ~~d~VIL~tHeP~w~~~~~~~~~t-~~~l~~Lle~vL~~RV~LvLAGHiHhYsR 616 (999)
.-|-||+++|-..-........+. .....+++.+. ..+++++|+||.|....
T Consensus 191 ~~D~IIvL~H~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~iD~IlgGHsH~~~~ 243 (288)
T cd07412 191 GVDAIVVLAHEGGSTKGGDDTCSAASGPIADIVNRL-DPDVDVVFAGHTHQAYN 243 (288)
T ss_pred CCCEEEEEeCCCCCCCCCCccccccChhHHHHHhhc-CCCCCEEEeCccCcccc
Confidence 458999999987654322111000 01122333332 35799999999997654
No 75
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=91.57 E-value=0.17 Score=53.87 Aligned_cols=18 Identities=17% Similarity=0.115 Sum_probs=13.9
Q ss_pred CceeEEEcCccCCcceee
Q 001892 601 GRCKLRIAGDMHHYMRHS 618 (999)
Q Consensus 601 ~RV~LvLAGHiHhYsR~~ 618 (999)
...+++++||.|.+....
T Consensus 190 ~~p~vii~Gh~h~~~~~~ 207 (243)
T cd07386 190 EVPDILHTGHVHVYGVGV 207 (243)
T ss_pred CCCCEEEECCCCchHhEE
Confidence 467899999999765543
No 76
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=90.87 E-value=0.89 Score=47.34 Aligned_cols=43 Identities=16% Similarity=0.134 Sum_probs=26.9
Q ss_pred CCCCeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCC
Q 001892 563 GERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHH 613 (999)
Q Consensus 563 ~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHh 613 (999)
.-++..|.++|-=.+.... +...++.+-++ ..+++.+.||+|-
T Consensus 78 ~~~g~ki~l~HGh~~~~~~-----~~~~l~~la~~---~~~Dvli~GHTH~ 120 (172)
T COG0622 78 EVGGVKIFLTHGHLYFVKT-----DLSLLEYLAKE---LGADVLIFGHTHK 120 (172)
T ss_pred EECCEEEEEECCCcccccc-----CHHHHHHHHHh---cCCCEEEECCCCc
Confidence 3467899999974433210 12334333333 4799999999995
No 77
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=90.27 E-value=3.3 Score=49.67 Aligned_cols=50 Identities=12% Similarity=0.080 Sum_probs=30.1
Q ss_pred CCCeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCCcc
Q 001892 564 ERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (999)
Q Consensus 564 ~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHhYs 615 (999)
.-|-||+++|.-........ ++.+...++.+++-...|+++|+||.|.+-
T Consensus 209 ~~D~IV~LsH~G~~~~~~~~--~~~~~d~~la~~~~~~~IDvIlgGHsH~~~ 258 (551)
T PRK09558 209 KPDVIIALTHMGHYDDGEHG--SNAPGDVEMARSLPAGGLDMIVGGHSQDPV 258 (551)
T ss_pred CCCEEEEEeccccccCCccC--CCCccHHHHHHhCCccCceEEEeCCCCccc
Confidence 45899999998875332111 011111344455412479999999999753
No 78
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=90.09 E-value=1.1 Score=45.73 Aligned_cols=49 Identities=16% Similarity=0.081 Sum_probs=32.9
Q ss_pred CeEEEEecCCCCccccccc--------ccchhhHHHHHhhhhCCceeEEEcCccC-Cccee
Q 001892 566 DSVIIMTHEPNWLLDWYFN--------NVSGKNVKHLICDYLKGRCKLRIAGDMH-HYMRH 617 (999)
Q Consensus 566 d~VIL~tHeP~w~~~~~~~--------~~t~~~l~~Lle~vL~~RV~LvLAGHiH-hYsR~ 617 (999)
+.-||+||+|+..-....+ ....+.+++++++. |.+..+|||.| .|+|-
T Consensus 69 ~~DILlTh~wP~gi~~~~~~~~~~~~~~~GS~~i~~l~~~l---kPrYhf~gh~~~fyer~ 126 (150)
T cd07380 69 GVDILLTSEWPKGISKLSKVPFEETLLICGSDLIAELAKKL---KPRYHFAGLEGVFYERE 126 (150)
T ss_pred CCCEEECCCCchhhhhhCCCcccccccCCCCHHHHHHHHHc---CCCeEeecCCCceEeec
Confidence 4568999999976422111 11234566676776 88999999999 67663
No 79
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=89.54 E-value=1.1 Score=46.72 Aligned_cols=44 Identities=27% Similarity=0.391 Sum_probs=29.4
Q ss_pred cCCCCeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCC
Q 001892 562 VGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHH 613 (999)
Q Consensus 562 v~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHh 613 (999)
+.-++..|++.|-|.=..+. . +.+.+ +.+++.++.+.|-||.|.
T Consensus 104 ie~dg~~~~LsHyP~~~~~~--~---~~~~r---~~y~~~~~~llIHGH~H~ 147 (186)
T COG4186 104 IEWDGEDVYLSHYPRPGQDH--P---GMESR---FDYLRLRVPLLIHGHLHS 147 (186)
T ss_pred eeECCeEEEEEeCCCCCCCC--c---chhhh---HHHHhccCCeEEeccccc
Confidence 33467889999998744321 1 11222 345578999999999997
No 80
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=88.85 E-value=4.5 Score=48.86 Aligned_cols=112 Identities=18% Similarity=0.193 Sum_probs=57.3
Q ss_pred EEEeCCCCCCCCChhHHHHHhhccc--CC-Cccc-------CCCCcceEEEECCC-cEEEEEEecCCC--------CCC-
Q 001892 487 CYIIPGNHDWFDGLNTFMRFICHKS--WL-GGWF-------MPQKKSYFALQLPK-GWWVFGLDLALH--------CDI- 546 (999)
Q Consensus 487 vfAIPGNHDWyDGL~aF~R~F~~r~--~l-gGWr-------mpQ~~SYFAlrLP~-~wWLlGLDsql~--------gdI- 546 (999)
=.+.+||||+=-|.+.+.+...+.. ++ +... .+.-.+|-.++... ..=++|+.+... .++
T Consensus 84 Da~~lGNHEFd~G~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~p~~i~~~~g~kIgiiGl~~~~~~~~~~~~~~~~~ 163 (550)
T TIGR01530 84 DFFTLGNHEFDAGNEGLKEFLEPLEIPVLSANVIPDAASILHGKWKPSAIFERAGEKIAIIGLDTVKKTVESSSPGKDIK 163 (550)
T ss_pred CEEEeccccccCCHHHHHHHHHhCCCCEEEEeeecCCCcccccCcCceEEEEECCeEEEEEEeecCcccccccCCCCceE
Confidence 4568999997557766655443222 11 1110 01223565555422 256888864211 011
Q ss_pred --CHH--HHHHHHHHHHhhcCCCCeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCCcc
Q 001892 547 --DVY--QFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (999)
Q Consensus 547 --D~~--Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHhYs 615 (999)
|.. -.++.+++ ++ +.-|-||+++|--.- .+ .++.+++ ..+++.|+||.|.+-
T Consensus 164 f~d~~~~~~~~v~~L-k~--~g~D~II~lsH~g~~----------~d--~~la~~~--~~iD~IigGHsH~~~ 219 (550)
T TIGR01530 164 FIDEIAAAQIAANAL-KQ--QGINKIILLSHAGFE----------KN--CEIAQKI--NDIDVIVSGDSHYLL 219 (550)
T ss_pred ECCHHHHHHHHHHHH-Hh--CCCCEEEEEecCCcH----------HH--HHHHhcC--CCCCEEEeCCCCccc
Confidence 211 11222222 21 224889999997531 01 1233444 369999999999854
No 81
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=88.68 E-value=14 Score=44.12 Aligned_cols=119 Identities=18% Similarity=0.142 Sum_probs=63.9
Q ss_pred EeCCCCCCCCChhHHHHHhhccc--CC-Ccc------cCCCCcceEEEECCCc-EEEEEEecCCC---------CCCC-H
Q 001892 489 IIPGNHDWFDGLNTFMRFICHKS--WL-GGW------FMPQKKSYFALQLPKG-WWVFGLDLALH---------CDID-V 548 (999)
Q Consensus 489 AIPGNHDWyDGL~aF~R~F~~r~--~l-gGW------rmpQ~~SYFAlrLP~~-wWLlGLDsql~---------gdID-~ 548 (999)
+..|||+..-|++.+.+..-+-. ++ +.+ ..+.-.+|.-++.+.- .=++|+.+... .++. .
T Consensus 107 ~tiGNHEFd~g~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~~~~~~~~~~~~~~~~~~f~ 186 (517)
T COG0737 107 MTLGNHEFDYGLEALARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLTTPTIPTWEKPNAIEGVTFR 186 (517)
T ss_pred EeecccccccCHHHHHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEecCCcccccccccccCCcEEc
Confidence 46799999999988888665432 21 111 1122236777777642 34677765211 1121 1
Q ss_pred HHHHHHHHHHHhhcCC--CCeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCCc
Q 001892 549 YQFKFFAELVKEQVGE--RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHY 614 (999)
Q Consensus 549 ~Q~~wFe~ll~~~v~~--~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHhY 614 (999)
...+..++.+.+ +.. -|-||+++|-+.-...........+ ....+ ..+++.++||.|++
T Consensus 187 d~~e~~~~~i~e-lk~~~vD~iI~LsH~G~~~d~~~~~~~~~~--~~~~~----~~iD~i~~GH~H~~ 247 (517)
T COG0737 187 DPIEAAKKYIPE-LKGEGVDVIIALSHLGIEDDLELASEVPGD--VDVAV----PGIDLIIGGHSHTV 247 (517)
T ss_pred CHHHHHHHHHHH-HHhcCCCEEEEEeccCcCcccccccccccc--ccccc----cCcceEeccCCccc
Confidence 223344443332 222 5899999999986553321111000 00001 23999999999975
No 82
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=88.31 E-value=4.9 Score=45.29 Aligned_cols=38 Identities=16% Similarity=0.304 Sum_probs=26.0
Q ss_pred CCeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCCcc
Q 001892 565 RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (999)
Q Consensus 565 ~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHhYs 615 (999)
-|-||+++|--.+..+ ..+.+++ ..+++.|.||.|.+.
T Consensus 208 vD~II~LsH~g~~~~d-----------~~lA~~v--~gIDvIigGHsH~~l 245 (313)
T cd08162 208 INKIILLSHLQQISIE-----------QALAALL--SGVDVIIAGGSNTLL 245 (313)
T ss_pred CCEEEEEecccccchH-----------HHHHhcC--CCCCEEEeCCCCccC
Confidence 4889999998533211 1233444 369999999999864
No 83
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=87.86 E-value=7.5 Score=41.36 Aligned_cols=132 Identities=13% Similarity=0.070 Sum_probs=66.3
Q ss_pred CCCcEEEeCCCCCCCCChhHHHHHhh--cccC---CC-cccCCCCcceEEEECCCc-EEEEEEecCCCCCCC--------
Q 001892 483 DGPQCYIIPGNHDWFDGLNTFMRFIC--HKSW---LG-GWFMPQKKSYFALQLPKG-WWVFGLDLALHCDID-------- 547 (999)
Q Consensus 483 ~gP~vfAIPGNHDWyDGL~aF~R~F~--~r~~---lg-GWrmpQ~~SYFAlrLP~~-wWLlGLDsql~gdID-------- 547 (999)
-+..+..+.+||++=-|.+++.+..- ++.. .+ |-...+...|..++.+.. .=++|+-+.......
T Consensus 76 ~G~d~~tlaNNH~fD~G~~gl~~t~~~l~~~~i~~~g~~~~~~~~~~~~i~~~~g~kVg~ig~t~~~~~~~~~~~~~~~~ 155 (239)
T cd07381 76 AGFDVVSLANNHTLDYGEEGLLDTLDALDEAGIAHAGAGRNLEEARRPAILEVNGIKVAFLAYTYGTNGIPLAAGARPGG 155 (239)
T ss_pred hCCCEEEcccccccccchHHHHHHHHHHHHcCCceeECCCCHHHhcCcEEEEECCEEEEEEEEECCCCCCcCcccCCccc
Confidence 45667778789998667776666432 1211 11 111111123555555431 446666443222111
Q ss_pred --HHHHHHHHHHHHhhcCCCCeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCCcceeee
Q 001892 548 --VYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSY 619 (999)
Q Consensus 548 --~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHhYsR~~~ 619 (999)
..-.+-+.+.+++..+..|-||+.+|--. +. +....+..+++.+++....+++++.||.|..+..+.
T Consensus 156 ~~~~~~~~~~~~i~~lr~~~D~vIv~~H~G~---e~--~~~p~~~~~~la~~l~~~G~D~IiG~H~Hv~q~~E~ 224 (239)
T cd07381 156 VNPLDLERIAADIAEAKKKADIVIVSLHWGV---EY--SYYPTPEQRELARALIDAGADLVIGHHPHVLQGIEI 224 (239)
T ss_pred cCccCHHHHHHHHHHHhhcCCEEEEEecCcc---cC--CCCCCHHHHHHHHHHHHCCCCEEEcCCCCcCCCeEE
Confidence 00012233333221123688999999422 11 111122233344444455799999999999887765
No 84
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=87.44 E-value=6.4 Score=48.44 Aligned_cols=45 Identities=13% Similarity=0.105 Sum_probs=28.3
Q ss_pred CCeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCCc
Q 001892 565 RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHY 614 (999)
Q Consensus 565 ~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHhY 614 (999)
-|-||+++|...-.. .+ .+..+|....++++ ..|+++++||.|..
T Consensus 196 aDvII~LsH~G~~~d-~~--~~~~en~~~~l~~v--~gID~Il~GHsH~~ 240 (626)
T TIGR01390 196 ADIIVALAHSGISAD-PY--QPGAENSAYYLTKV--PGIDAVLFGHSHAV 240 (626)
T ss_pred CCEEEEEeccCcCCC-cc--ccccchHHHHHhcC--CCCCEEEcCCCCcc
Confidence 478999999875432 11 11223333334454 46999999999974
No 85
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=86.85 E-value=15 Score=39.30 Aligned_cols=133 Identities=9% Similarity=0.051 Sum_probs=64.6
Q ss_pred CCcEEEeCCCCCCCCChhHHHHHhh--ccc---CCCc-ccCCCCcceEEEECCC-cEEEEEEecCCCCC-----------
Q 001892 484 GPQCYIIPGNHDWFDGLNTFMRFIC--HKS---WLGG-WFMPQKKSYFALQLPK-GWWVFGLDLALHCD----------- 545 (999)
Q Consensus 484 gP~vfAIPGNHDWyDGL~aF~R~F~--~r~---~lgG-WrmpQ~~SYFAlrLP~-~wWLlGLDsql~gd----------- 545 (999)
+..+..+.+||+.=-|.+++.+... ++. +.|. -...+...|..++.+. ..=++|+-+.....
T Consensus 73 G~d~~~laNNH~fD~G~~gl~~t~~~l~~a~i~~~g~~~~~~~~~~~~i~~~~g~kIg~ig~t~~~~~~~~~~~~~~g~~ 152 (239)
T smart00854 73 GFDVVSLANNHSLDYGEEGLLDTLAALDAAGIAHVGAGRNLAEARKPAIVEVKGIKIALLAYTYGTNNGWAASKDRPGVA 152 (239)
T ss_pred CCCEEEeccCcccccchHHHHHHHHHHHHCCCCEeeCCCChHHhhCcEEEEECCEEEEEEEEEcCCCCCcccCCCCCCee
Confidence 4556677779998667777666442 111 1111 1111122355555542 14456653322110
Q ss_pred -CCHHHHHHHHHHHHhhcCCCCeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCCcceeeecC
Q 001892 546 -IDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYVP 621 (999)
Q Consensus 546 -ID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHhYsR~~~~~ 621 (999)
++....+=+.+.+++..+..|-||+++|--.-.. ..+ .+..+++.+++....++++++||.|..+..+..+
T Consensus 153 ~~~~~~~~~i~~~i~~lr~~~D~vIv~~H~G~e~~----~~p-~~~~~~~A~~l~~~G~DvIiG~H~H~~~~~e~~~ 224 (239)
T smart00854 153 LLPDLDREKILADIARARKKADVVIVSLHWGVEYQ----YEP-TDEQRELAHALIDAGADVVIGHHPHVLQPIEIYK 224 (239)
T ss_pred ecCcCCHHHHHHHHHHHhccCCEEEEEecCccccC----CCC-CHHHHHHHHHHHHcCCCEEEcCCCCcCCceEEEC
Confidence 1100011122222211123588999998654211 111 1222334444444579999999999988776543
No 86
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=85.67 E-value=1.1 Score=46.82 Aligned_cols=42 Identities=21% Similarity=0.149 Sum_probs=24.7
Q ss_pred EEEEeecCCCCCCchHHHHHhcCcccccccCCCCcccCCccEEEEcccccCCCCC
Q 001892 384 FDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPS 438 (999)
Q Consensus 384 Fd~VaDtGDG~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs 438 (999)
+.+++|+=.- ..+...+++.... .++.|.++++||++.-++.
T Consensus 3 i~~isDiHg~---~~~l~~~l~~~~~----------~~~~d~~~~~GD~v~~g~~ 44 (207)
T cd07424 3 DFVVGDIHGH---YSLLQKALDAVGF----------DPARDRLISVGDLIDRGPE 44 (207)
T ss_pred EEEEECCCCC---HHHHHHHHHHcCC----------CCCCCEEEEeCCcccCCCC
Confidence 4567787522 2344444443210 1357999999998875543
No 87
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=83.55 E-value=6.2 Score=43.71 Aligned_cols=56 Identities=16% Similarity=0.201 Sum_probs=31.7
Q ss_pred EEEEEeecCCCCCCchHHHHHhcCccccccc--CCCCcccCCccEEEEcccccCCCCC
Q 001892 383 WFDFMADTGDGGNSSYSVARLLAQPHIRVTR--DDSVFTLPRGDVLLIGGDLAYPNPS 438 (999)
Q Consensus 383 wFd~VaDtGDG~dStYaVA~LlAqp~L~v~~--~~~~~~lPRgdfLVlgGDlvYP~gs 438 (999)
++.+|+|++=|.+.....+-.+-+..|+-.. .++.....+-.-||++||.+=+.+.
T Consensus 1 ~i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~ 58 (257)
T cd07387 1 YIALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQ 58 (257)
T ss_pred CEEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCccccccc
Confidence 3568899987777655555444333333111 1111113344569999999887654
No 88
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=83.49 E-value=1.3 Score=47.58 Aligned_cols=17 Identities=29% Similarity=0.274 Sum_probs=13.2
Q ss_pred CCccEEEEcccccCCCC
Q 001892 421 PRGDVLLIGGDLAYPNP 437 (999)
Q Consensus 421 PRgdfLVlgGDlvYP~g 437 (999)
.++|.+++.||+.....
T Consensus 57 ~~~d~vIi~GDl~h~~~ 73 (225)
T TIGR00024 57 YGIEALIINGDLKHEFK 73 (225)
T ss_pred cCCCEEEEcCccccccC
Confidence 35789999999986543
No 89
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=82.00 E-value=13 Score=45.96 Aligned_cols=45 Identities=18% Similarity=0.173 Sum_probs=27.5
Q ss_pred CCeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCCc
Q 001892 565 RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHY 614 (999)
Q Consensus 565 ~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHhY 614 (999)
-|-||+++|--.-. +.+ .+..+|....++++ ..+++++.||.|..
T Consensus 219 aDvII~LsH~G~~~-d~~--~~~aen~~~~l~~v--~gID~Il~GHsH~~ 263 (649)
T PRK09420 219 ADIVVAIPHSGISA-DPY--KAMAENSVYYLSEV--PGIDAIMFGHSHAV 263 (649)
T ss_pred CCEEEEEecCCcCC-CCc--cccccchhHHHhcC--CCCCEEEeCCCCcc
Confidence 47888899886532 211 11223333333444 46999999999975
No 90
>COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]
Probab=80.49 E-value=6.6 Score=47.02 Aligned_cols=44 Identities=20% Similarity=0.320 Sum_probs=27.3
Q ss_pred eEEEEEeecC-CCCCC-chHHHHHhcCcccccccCCCCcccCCccEEEEcccccCCCCCh
Q 001892 382 LWFDFMADTG-DGGNS-SYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSA 439 (999)
Q Consensus 382 lwFd~VaDtG-DG~dS-tYaVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~ 439 (999)
+-|...||++ +||.. -|+..+-|++. .+||+|+.||-+|-.|-.
T Consensus 140 i~~~~fa~ascQ~~~~gy~~aY~~ma~~--------------~~D~viH~GDyIYeyg~~ 185 (522)
T COG3540 140 IRFVWFADASCQGWEIGYMTAYKTMAKE--------------EPDFVIHLGDYIYEYGPI 185 (522)
T ss_pred chhhhhhhccccccccchhHHHHHHHhc--------------CCCEEEEcCCeeeccCCc
Confidence 3344444554 55433 34555656553 279999999999987543
No 91
>PHA02239 putative protein phosphatase
Probab=80.06 E-value=2 Score=46.49 Aligned_cols=45 Identities=9% Similarity=0.093 Sum_probs=24.5
Q ss_pred EEEEEeecCCCCCCchHHHHHhcCcccccccCCCCcccCCccEEEEcccccCCCCCh
Q 001892 383 WFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSA 439 (999)
Q Consensus 383 wFd~VaDtGDG~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~ 439 (999)
.+-+++|.= |. .....+++++-.. .....|.++++||++--++..
T Consensus 2 ~~~~IsDIH-G~--~~~l~~ll~~i~~---------~~~~~d~li~lGD~iDrG~~s 46 (235)
T PHA02239 2 AIYVVPDIH-GE--YQKLLTIMDKINN---------ERKPEETIVFLGDYVDRGKRS 46 (235)
T ss_pred eEEEEECCC-CC--HHHHHHHHHHHhh---------cCCCCCEEEEecCcCCCCCCh
Confidence 356788886 32 2234444443210 011258899999977655443
No 92
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=79.70 E-value=20 Score=45.56 Aligned_cols=47 Identities=17% Similarity=0.210 Sum_probs=28.8
Q ss_pred CCeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCCcce
Q 001892 565 RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMR 616 (999)
Q Consensus 565 ~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHhYsR 616 (999)
-|-||+++|.-.-.. .. ....++....++++ ..|+++|+||.|+.-.
T Consensus 245 aDvIIaLsH~G~~~d-~~--~~~~ena~~~l~~v--~gID~IlgGHsH~~~~ 291 (780)
T PRK09418 245 ADVIVALAHSGVDKS-GY--NVGMENASYYLTEV--PGVDAVLMGHSHTEVK 291 (780)
T ss_pred CCEEEEEeccCcccc-cc--cccchhhhHHHhcC--CCCCEEEECCCCCccc
Confidence 478899999876432 11 11123333333443 4699999999998643
No 93
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=77.45 E-value=1.8 Score=51.45 Aligned_cols=94 Identities=21% Similarity=0.394 Sum_probs=50.7
Q ss_pred CCCCeEEEEEeecCCCCCCchHHHHHhcCcccccccCCCCcccCCccEEEEccccc-----CCCCChhhhhhccccchhh
Q 001892 378 EKEDLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLA-----YPNPSAFTYERRLFRPFEY 452 (999)
Q Consensus 378 ~d~~lwFd~VaDtGDG~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlv-----YP~gs~e~Y~~Rfv~PYe~ 452 (999)
.++++...+++|.=-|. .++..-.-.. .++- -.+.....+|-..++.+||+| ||+-..+-...--+++|+.
T Consensus 222 ~~e~v~v~~isDih~GS-k~F~~~~f~~--fi~w-l~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~ 297 (481)
T COG1311 222 GDERVYVALISDIHRGS-KEFLEDEFEK--FIDW-LNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEE 297 (481)
T ss_pred CCcceEEEEEeeeeccc-HHHHHHHHHH--HHHH-hcCCcccccceEEEEEecccccccccccCcccccccccchHHHHH
Confidence 45677788888886652 1111111110 0000 011112567888999999985 7876544333333455654
Q ss_pred hcCCCCCCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCC
Q 001892 453 ALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDW 496 (999)
Q Consensus 453 Al~~~~~~~~e~~~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDW 496 (999)
+-. .+ ++.| +-+.++++|||||-
T Consensus 298 ~A~--------~L----~~vp---------~~I~v~i~PGnhDa 320 (481)
T COG1311 298 LAE--------FL----DQVP---------EHIKVFIMPGNHDA 320 (481)
T ss_pred HHH--------HH----hhCC---------CCceEEEecCCCCc
Confidence 421 11 1222 34679999999996
No 94
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=75.45 E-value=24 Score=46.55 Aligned_cols=48 Identities=15% Similarity=0.054 Sum_probs=29.4
Q ss_pred CCeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCCcce
Q 001892 565 RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMR 616 (999)
Q Consensus 565 ~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHhYsR 616 (999)
-|-||+++|-..=..... ....+...++.+++ ..++++++||.|....
T Consensus 235 aDvII~l~H~G~~~~~~~--~~~en~~~~la~~~--~gID~Il~GHsH~~~~ 282 (1163)
T PRK09419 235 ADVIVALAHSGIESEYQS--SGAEDSVYDLAEKT--KGIDAIVAGHQHGLFP 282 (1163)
T ss_pred CCEEEEEeccCcCCCCCC--CCcchHHHHHHHhC--CCCcEEEeCCCccccc
Confidence 488999999876332110 01122233444454 4699999999998654
No 95
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=74.88 E-value=1.3e+02 Score=33.73 Aligned_cols=49 Identities=14% Similarity=0.178 Sum_probs=31.2
Q ss_pred HHHHHHHhhcCCCCeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCC
Q 001892 553 FFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHH 613 (999)
Q Consensus 553 wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHh 613 (999)
-.++++++...+.|-|||..|.-. + .....+..++.+||++++.-|+|=
T Consensus 132 ~~d~~i~~lk~~~d~IIVd~Haea----------t--sEK~a~~~~ldg~vsaVvGtHtHV 180 (266)
T TIGR00282 132 VLKELINMLKKDCDLIFVDFHAET----------T--SEKNAFGMAFDGYVTAVVGTHTHV 180 (266)
T ss_pred HHHHHHHhhhcCCCEEEEEeCCCC----------H--HHHHHHHHHhCCCccEEEeCCCCC
Confidence 344444422223578999999754 1 112234556688999999999994
No 96
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=73.40 E-value=2.8 Score=46.51 Aligned_cols=19 Identities=37% Similarity=0.634 Sum_probs=14.8
Q ss_pred CCccEEEEcccccCCCCCh
Q 001892 421 PRGDVLLIGGDLAYPNPSA 439 (999)
Q Consensus 421 PRgdfLVlgGDlvYP~gs~ 439 (999)
+..|.++++||++--++..
T Consensus 27 ~~~D~li~lGDlVdrGp~s 45 (275)
T PRK00166 27 PAKDTLWLVGDLVNRGPDS 45 (275)
T ss_pred CCCCEEEEeCCccCCCcCH
Confidence 4568899999988866644
No 97
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=73.29 E-value=3.5 Score=45.23 Aligned_cols=86 Identities=26% Similarity=0.196 Sum_probs=45.9
Q ss_pred EEEEEeecCCCCCCchHHHHHhcCcccc--c-ccCCCCcccCCccEEEEcccccCCCCChhhhhhccccchhhhcCCCCC
Q 001892 383 WFDFMADTGDGGNSSYSVARLLAQPHIR--V-TRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPW 459 (999)
Q Consensus 383 wFd~VaDtGDG~dStYaVA~LlAqp~L~--v-~~~~~~~~lPRgdfLVlgGDlvYP~gs~e~Y~~Rfv~PYe~Al~~~~~ 459 (999)
.-.++||+-=|+...++-..++--+..+ + ..-++-...-+++-+|+.||+--..+-....+.++++-+..++
T Consensus 21 ~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~----- 95 (235)
T COG1407 21 RTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELL----- 95 (235)
T ss_pred cEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHh-----
Confidence 4567889988877776322221100000 0 0000001123567899999976655544445555544443332
Q ss_pred CcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCC
Q 001892 460 YKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDW 496 (999)
Q Consensus 460 ~~~e~~~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDW 496 (999)
+...+..|+||||=
T Consensus 96 -----------------------~~~evi~i~GNHD~ 109 (235)
T COG1407 96 -----------------------DEREVIIIRGNHDN 109 (235)
T ss_pred -----------------------ccCcEEEEeccCCC
Confidence 12259999999995
No 98
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=70.66 E-value=2.9 Score=44.44 Aligned_cols=44 Identities=20% Similarity=0.158 Sum_probs=26.1
Q ss_pred EEEEEeecCCCCCCchHHHHHhcCcccccccCCCCcccCCccEEEEcccccCCCCCh
Q 001892 383 WFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSA 439 (999)
Q Consensus 383 wFd~VaDtGDG~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~ 439 (999)
.+.+++|+=.- ..+..++++.-. -.+..|.++.+||++--++..
T Consensus 16 ri~visDiHg~---~~~l~~~l~~~~----------~~~~~d~l~~lGD~vdrG~~~ 59 (218)
T PRK09968 16 HIWVVGDIHGE---YQLLQSRLHQLS----------FCPETDLLISVGDNIDRGPES 59 (218)
T ss_pred eEEEEEeccCC---HHHHHHHHHhcC----------CCCCCCEEEECCCCcCCCcCH
Confidence 67889998421 122333333211 024578999999999866654
No 99
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=67.48 E-value=5 Score=47.22 Aligned_cols=51 Identities=27% Similarity=0.350 Sum_probs=30.4
Q ss_pred CCccEEEEcccccCCC--CChhhhhhccccchhhhcCCCCCCcccccccCCCCCCCCCcccccCCCCcEEEeCCCCCCC
Q 001892 421 PRGDVLLIGGDLAYPN--PSAFTYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWF 497 (999)
Q Consensus 421 PRgdfLVlgGDlvYP~--gs~e~Y~~Rfv~PYe~Al~~~~~~~~e~~~~~kpe~p~~~~~l~~~~gP~vfAIPGNHDWy 497 (999)
..||+++++||+.=-+ .+.+++..+..+ +.--.++ | ...++.-||||||+=
T Consensus 92 lkPdvvffLGDLfDeG~~~~~eEf~~~~~R-fkkIf~~------------k-------------~~~~~~~i~GNhDIG 144 (410)
T KOG3662|consen 92 LKPDVVFFLGDLFDEGQWAGDEEFKKRYER-FKKIFGR------------K-------------GNIKVIYIAGNHDIG 144 (410)
T ss_pred cCCCEEEEeccccccCccCChHHHHHHHHH-HHHhhCC------------C-------------CCCeeEEeCCccccc
Confidence 4589999999965322 345666544422 3322221 1 123489999999973
No 100
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=66.79 E-value=1.1e+02 Score=33.08 Aligned_cols=134 Identities=13% Similarity=0.106 Sum_probs=72.6
Q ss_pred CCCcEEEeCCCCCCCCChhHHHHHhh--ccc---CCC-cccCCCCcceEEEECCCc-EEEEEEecCCCCC----------
Q 001892 483 DGPQCYIIPGNHDWFDGLNTFMRFIC--HKS---WLG-GWFMPQKKSYFALQLPKG-WWVFGLDLALHCD---------- 545 (999)
Q Consensus 483 ~gP~vfAIPGNHDWyDGL~aF~R~F~--~r~---~lg-GWrmpQ~~SYFAlrLP~~-wWLlGLDsql~gd---------- 545 (999)
-+..+..+--||-+=-|.+++.+... ++. +.| |....+.+.+..++.+.. .-+++.-....+.
T Consensus 74 ~G~d~vslANNH~~D~G~~gl~~Tl~~L~~~gi~~~Gag~~~~~a~~p~i~~~~g~kia~l~~t~~~~~~~~~~~~~~~~ 153 (250)
T PF09587_consen 74 AGFDVVSLANNHIFDYGEEGLLDTLEALDKAGIPYVGAGRNLEEARRPAIIEVNGVKIAFLGYTDGENGYSSANGNRPYG 153 (250)
T ss_pred cCCCEEEecCCCCccccHHHHHHHHHHHHHCCCcEeECcCChHHhcCeEEEEECCEEEEEEEEEcCCCCCcccccccccc
Confidence 45678899999965445555555432 122 122 233333334455666432 3344443322110
Q ss_pred -----------CCHHHHHHHHHHHHhhcCCCCeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCCc
Q 001892 546 -----------IDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHY 614 (999)
Q Consensus 546 -----------ID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHhY 614 (999)
..+++.+.+.+.+++..+..|-||++.|- .... .....+..+++.+++....+++++.+|.|..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~i~~~i~~~r~~~D~vIv~~Hw-G~e~----~~~p~~~q~~~a~~lidaGaDiIiG~HpHv~ 228 (250)
T PF09587_consen 154 FSYRPDKAGLNPNRPGIERIKEDIREARKKADVVIVSLHW-GIEY----ENYPTPEQRELARALIDAGADIIIGHHPHVI 228 (250)
T ss_pred ccccccccccccccchHHHHHHHHHHHhcCCCEEEEEecc-CCCC----CCCCCHHHHHHHHHHHHcCCCEEEeCCCCcc
Confidence 01233466666665433557899999986 2111 1111233334445555557999999999998
Q ss_pred ceeeecC
Q 001892 615 MRHSYVP 621 (999)
Q Consensus 615 sR~~~~~ 621 (999)
|..+.-+
T Consensus 229 q~~E~y~ 235 (250)
T PF09587_consen 229 QPVEIYK 235 (250)
T ss_pred cceEEEC
Confidence 8877553
No 101
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=64.29 E-value=6.1 Score=43.60 Aligned_cols=19 Identities=37% Similarity=0.599 Sum_probs=14.6
Q ss_pred CCccEEEEcccccCCCCCh
Q 001892 421 PRGDVLLIGGDLAYPNPSA 439 (999)
Q Consensus 421 PRgdfLVlgGDlvYP~gs~ 439 (999)
|..|.++++||+|--++..
T Consensus 25 ~~~D~Li~lGDlVdRGp~s 43 (257)
T cd07422 25 PAKDRLWLVGDLVNRGPDS 43 (257)
T ss_pred CCCCEEEEecCcCCCCcCH
Confidence 4568999999988766544
No 102
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=58.94 E-value=18 Score=39.66 Aligned_cols=21 Identities=38% Similarity=0.588 Sum_probs=17.7
Q ss_pred CcEEEeCCCCCCCCChhHHHHHhhc
Q 001892 485 PQCYIIPGNHDWFDGLNTFMRFICH 509 (999)
Q Consensus 485 P~vfAIPGNHDWyDGL~aF~R~F~~ 509 (999)
+.++.|||| .|+.+|..-|.+
T Consensus 3 ~li~~IPGN----PGlv~fY~~Fl~ 23 (266)
T PF10230_consen 3 PLIVFIPGN----PGLVEFYEEFLS 23 (266)
T ss_pred EEEEEECCC----CChHHHHHHHHH
Confidence 469999999 899998887764
No 103
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=57.98 E-value=12 Score=38.67 Aligned_cols=18 Identities=33% Similarity=0.551 Sum_probs=13.2
Q ss_pred CCccEEEEcccccCCCCC
Q 001892 421 PRGDVLLIGGDLAYPNPS 438 (999)
Q Consensus 421 PRgdfLVlgGDlvYP~gs 438 (999)
+..|.+|++||++--++.
T Consensus 23 ~~~d~li~lGD~vdrg~~ 40 (225)
T cd00144 23 PPNDKLIFLGDYVDRGPD 40 (225)
T ss_pred CCCCEEEEECCEeCCCCC
Confidence 356889999997765443
No 104
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=53.78 E-value=79 Score=40.66 Aligned_cols=45 Identities=24% Similarity=0.265 Sum_probs=26.0
Q ss_pred CCeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeEEEcCccCCc
Q 001892 565 RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHY 614 (999)
Q Consensus 565 ~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~LvLAGHiHhY 614 (999)
-|-||+++|.-.- .+... ...+|....+.++ ..|+++++||.|..
T Consensus 310 aDvIIaLsH~G~~-~d~~~--~~~En~~~~LA~v--~GIDaIvgGHsH~~ 354 (814)
T PRK11907 310 ADIVLVLSHSGIG-DDQYE--VGEENVGYQIASL--SGVDAVVTGHSHAE 354 (814)
T ss_pred CCEEEEEeCCCcc-ccccc--ccccchhhHHhcC--CCCCEEEECCCCCc
Confidence 4778888887643 22211 1122322222333 46999999999974
No 105
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=53.34 E-value=10 Score=40.42 Aligned_cols=19 Identities=32% Similarity=0.560 Sum_probs=14.3
Q ss_pred CCccEEEEcccccCCCCCh
Q 001892 421 PRGDVLLIGGDLAYPNPSA 439 (999)
Q Consensus 421 PRgdfLVlgGDlvYP~gs~ 439 (999)
++.|-++.+||++--++..
T Consensus 36 ~~~d~lv~lGDlIDrG~~s 54 (234)
T cd07423 36 PEGRRAVFVGDLVDRGPDS 54 (234)
T ss_pred CCCCEEEEECCccCCCCCH
Confidence 3568899999988765543
No 106
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=52.99 E-value=8.7 Score=40.73 Aligned_cols=44 Identities=23% Similarity=0.228 Sum_probs=25.8
Q ss_pred EEEEEeecCCCCCCchHHHHHhcCcccccccCCCCcccCCccEEEEcccccCCCCCh
Q 001892 383 WFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSA 439 (999)
Q Consensus 383 wFd~VaDtGDG~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~ 439 (999)
.+.+|||.=.- -.+..+++++-. . .++.|-|+.+||++=-++..
T Consensus 18 ri~vigDIHG~---~~~L~~lL~~i~--~--------~~~~D~li~lGDlvDrGp~s 61 (218)
T PRK11439 18 HIWLVGDIHGC---FEQLMRKLRHCR--F--------DPWRDLLISVGDLIDRGPQS 61 (218)
T ss_pred eEEEEEcccCC---HHHHHHHHHhcC--C--------CcccCEEEEcCcccCCCcCH
Confidence 46788888432 223444554421 1 24578899999988545543
No 107
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=52.97 E-value=11 Score=40.91 Aligned_cols=51 Identities=20% Similarity=0.249 Sum_probs=27.0
Q ss_pred EEEEeecCCCCCCchHHHHHhcCcccccccCCCCcccCCccEEEEcccccCCCCCh
Q 001892 384 FDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSA 439 (999)
Q Consensus 384 Fd~VaDtGDG~dStYaVA~LlAqp~L~v~~~~~~~~lPRgdfLVlgGDlvYP~gs~ 439 (999)
+.+|||.= |. -.+..+++.+-..+. .++....|..|.+|++||++=-++..
T Consensus 3 ~~vIGDIH-G~--~~~L~~lL~~~~~~~--~~~~~~~~~~d~li~lGDliDRGp~S 53 (245)
T PRK13625 3 YDIIGDIH-GC--YQEFQALTEKLGYNW--SSGLPVHPDQRKLAFVGDLTDRGPHS 53 (245)
T ss_pred eEEEEECc-cC--HHHHHHHHHHcCCCc--ccCcccCCCCCEEEEECcccCCCcCh
Confidence 56788884 31 223555555422111 00111235568899999977655443
No 108
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=40.88 E-value=24 Score=37.71 Aligned_cols=12 Identities=25% Similarity=0.313 Sum_probs=9.9
Q ss_pred CccEEEEccccc
Q 001892 422 RGDVLLIGGDLA 433 (999)
Q Consensus 422 RgdfLVlgGDlv 433 (999)
..|.+|++||++
T Consensus 33 ~~d~lvflGD~I 44 (222)
T cd07413 33 PERQVVFLGDLI 44 (222)
T ss_pred CCCEEEEeCccc
Confidence 467899999966
No 109
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=39.19 E-value=23 Score=39.95 Aligned_cols=19 Identities=37% Similarity=0.651 Sum_probs=15.2
Q ss_pred CCccEEEEcccccCCCCCh
Q 001892 421 PRGDVLLIGGDLAYPNPSA 439 (999)
Q Consensus 421 PRgdfLVlgGDlvYP~gs~ 439 (999)
|..|-++++||++-.++..
T Consensus 27 ~~~D~l~~lGDlVdRGP~s 45 (279)
T TIGR00668 27 PGQDTLWLTGDLVARGPGS 45 (279)
T ss_pred CCCCEEEEeCCccCCCCCH
Confidence 4567899999999887765
No 110
>KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism]
Probab=39.17 E-value=1e+02 Score=38.25 Aligned_cols=125 Identities=18% Similarity=0.236 Sum_probs=71.2
Q ss_pred ccCCCCcEEEeCCCCCCCCC-hh---H--HHHHhhcccC------CC--cccCCCCcceEEEECCCcEEEEEEec-----
Q 001892 480 KQYDGPQCYIIPGNHDWFDG-LN---T--FMRFICHKSW------LG--GWFMPQKKSYFALQLPKGWWVFGLDL----- 540 (999)
Q Consensus 480 ~~~~gP~vfAIPGNHDWyDG-L~---a--F~R~F~~r~~------lg--GWrmpQ~~SYFAlrLP~~wWLlGLDs----- 540 (999)
..|+.+ ..|||+.|.+ .+ . |...+..+-- .. +=..|--.+|+.+-.|++..+..+..
T Consensus 121 ~~yD~l----~lGNHEl~~~~ve~l~~~~f~~~~k~~~la~Nv~~~~~~~~~~p~~~~~~t~~t~~~~~v~~vG~~~~~f 196 (602)
T KOG4419|consen 121 MPYDIL----TLGNHELYQANVENLTEEYFLPAWKGPYLASNVQIFDSSNSFVPFGLEYATFLTPHGVVVLAVGFLCASF 196 (602)
T ss_pred Cccchh----hhcchhhhhhhhhccchhhhhhhhccceeecceEEecCchhhccccccceEEeccCceEEEEEEEeeccc
Confidence 344556 7899999877 22 1 3332222110 01 11233334688888898866555432
Q ss_pred CCCC-CC-C-----HHHHHHHHHHHHhhcCCCCeEEEEecCCCCcccccccccchhhHHHHHhhhhCCceeE-EEcCccC
Q 001892 541 ALHC-DI-D-----VYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKL-RIAGDMH 612 (999)
Q Consensus 541 ql~g-dI-D-----~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lle~vL~~RV~L-vLAGHiH 612 (999)
+.+. +. + -.|.+|..+.++. +.-+-+|++.|-|.=.. ...+.+-..+++..+ .+++ ++.||.|
T Consensus 197 ~~~~n~~~v~~veei~~~~~~~~m~~~--~~idlii~lgH~~~~~~------~e~~~~~~~ir~~~p-~t~IqviGGHsh 267 (602)
T KOG4419|consen 197 SGAANRTVVVPVEEITQSEWEQDMVNT--TDIDLIIALGHSPVRDD------DEWKSLHAEIRKVHP-NTPIQVIGGHSH 267 (602)
T ss_pred cccCCCcccccHHHHhccchHHHHhhc--cCccEEEEecccccccc------hhhhhHHHHHhhhCC-CCceEEECchhh
Confidence 2111 11 1 2588899998863 56688888899887322 123333334455533 3445 9999999
Q ss_pred --Cccee
Q 001892 613 --HYMRH 617 (999)
Q Consensus 613 --hYsR~ 617 (999)
.|.++
T Consensus 268 ird~a~~ 274 (602)
T KOG4419|consen 268 IRDFAVY 274 (602)
T ss_pred hhhhhhc
Confidence 47776
No 111
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=33.71 E-value=57 Score=36.30 Aligned_cols=99 Identities=19% Similarity=0.229 Sum_probs=56.7
Q ss_pred CCCCcchhHHHHHhhhheeEEecCcHHHHHHHhcccchhhhH-HHHHHHHHHhhcCccccCccCCCccchhHHHHHHHHH
Q 001892 29 YPHEHSRHAIIAVVVGCLFFISSDNMHTLIEKLDNNIKWWSM-YACLLGFFYFFSSPFIGKTITPSYSNFSRWYIAWILV 107 (999)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~w~~~ 107 (999)
+|+||++|+-+..++.+...+..=-+-..+...-.+..|+.+ .+++.|++.|.=.=+|-.|+..+.....+...
T Consensus 8 ~~~er~k~~~~G~~vl~ta~la~~s~~~a~~~~~~~~~~~ai~~glvwgl~I~~lDR~ivss~~~~~~~~~~~~~----- 82 (301)
T PF14362_consen 8 SPAERNKYAGIGAAVLFTALLAGLSGGYALYTVFGGPVWAAIPFGLVWGLVIFNLDRFIVSSIRKSDGSRKRLLQ----- 82 (301)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHH-----
Confidence 799999998876655443332221122222222222224443 45566666666555666666554442222222
Q ss_pred HHHhcCccccccccccccchhHHHHHHHHHHHHHHHHH
Q 001892 108 AAVYHLPSFQSMGVDLRMNLSLFLTIFLASVLFLLVFH 145 (999)
Q Consensus 108 a~~~h~p~~~~~g~d~r~~~s~~~~~~~~s~~~l~~~~ 145 (999)
+-.|.=|++.+-+-+|..+-|.+|+
T Consensus 83 -------------~~~R~~lAvliaivIs~pl~l~iF~ 107 (301)
T PF14362_consen 83 -------------ALPRLLLAVLIAIVISEPLELKIFE 107 (301)
T ss_pred -------------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2357778888888888888888876
No 112
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=23.42 E-value=69 Score=36.76 Aligned_cols=24 Identities=13% Similarity=0.119 Sum_probs=14.5
Q ss_pred CCccEEEEcccccCCCCChhhhhh
Q 001892 421 PRGDVLLIGGDLAYPNPSAFTYER 444 (999)
Q Consensus 421 PRgdfLVlgGDlvYP~gs~e~Y~~ 444 (999)
+..+.+|++||.+=-++...+..+
T Consensus 33 ~~~~~iVfLGDyVDRGPdS~eVld 56 (304)
T cd07421 33 FASALVIFLGDYCDRGPETRKVID 56 (304)
T ss_pred CCCcEEEEeCCcCCCCCCHHHHHH
Confidence 345689999996544454433333
No 113
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=22.55 E-value=2.6e+02 Score=30.18 Aligned_cols=80 Identities=20% Similarity=0.274 Sum_probs=41.2
Q ss_pred CCCcEEEeCCCCCCCCChhHHHHHhhccc----CCCcccCCCCcceEEEECCCcEEEEEEecCCCCCCCHHHHHHHHHHH
Q 001892 483 DGPQCYIIPGNHDWFDGLNTFMRFICHKS----WLGGWFMPQKKSYFALQLPKGWWVFGLDLALHCDIDVYQFKFFAELV 558 (999)
Q Consensus 483 ~gP~vfAIPGNHDWyDGL~aF~R~F~~r~----~lgGWrmpQ~~SYFAlrLP~~wWLlGLDsql~gdID~~Q~~wFe~ll 558 (999)
.++++.-||||.==|. +.|-+.... +... .+..-.||+++.+.. +-+++ +..=..|.+++.+.+
T Consensus 3 ~g~pVlFIhG~~Gs~~----q~rsl~~~~~~~~~~~~--~~~~~d~ft~df~~~--~s~~~----g~~l~~q~~~~~~~i 70 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYK----QVRSLASELQRKALLND--NSSHFDFFTVDFNEE--LSAFH----GRTLQRQAEFLAEAI 70 (225)
T ss_pred CCCEEEEECcCCCCHh----HHHHHHHHHhhhhhhcc--CccceeEEEeccCcc--ccccc----cccHHHHHHHHHHHH
Confidence 4567999999853222 333332111 0000 111224666666553 22222 222246777777765
Q ss_pred Hh-------hcCCCCeEEEEecC
Q 001892 559 KE-------QVGERDSVIIMTHE 574 (999)
Q Consensus 559 ~~-------~v~~~d~VIL~tHe 574 (999)
+. +..+.++||+++|.
T Consensus 71 ~~i~~~~~~~~~~~~~vilVgHS 93 (225)
T PF07819_consen 71 KYILELYKSNRPPPRSVILVGHS 93 (225)
T ss_pred HHHHHhhhhccCCCCceEEEEEc
Confidence 41 12567899999995
No 114
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=22.34 E-value=1.6e+02 Score=30.47 Aligned_cols=41 Identities=22% Similarity=0.243 Sum_probs=23.0
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCC
Q 001892 535 VFGLDLALHCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPN 576 (999)
Q Consensus 535 LlGLDsql~gdID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~ 576 (999)
++-+|- ....+|...++.+.+.+.+..+.+..+|+++|+|.
T Consensus 146 llllDE-Pt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~ 186 (201)
T cd03231 146 LWILDE-PTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDL 186 (201)
T ss_pred EEEEeC-CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCch
Confidence 455553 44456666666666666432233456666777665
Done!