Your job contains 1 sequence.
>001893
MKRELDYELAGSLDETSTQSLPQAGIQASDCVKAACENVRCKRFKVTKVNGFIVYSRVKR
SRFSNSDDLLEDDVIDKRINSKIHEGRINKVVKNVLNENGILESVVEEENQLVQMTVENV
IEETVKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPVEVLVT
QSEGFGNESMSLIEVEAIAEGSALTSPKKNLELKMSKKISLNKKPMTVTELFETGLLDGV
SVVYMGGIKFQASGLRGIIRDGGILCSCSLCNGCRVIPPSKFEIHACKQYRRASQYICFE
NGKSLLEVLRACRSVPLPMLKATLQSALSSLPEEKSFACVRCKGTFPITCVGKTGPGPLC
NSCVKSKKPQGTMTYTTGIRIRASGPKLVSRSSENDSMCISYQNNKRERKKTRKLLEADL
VSKSSSKSVSLRNLLKTRSPWELTRNSSRPGLIANSTPVTSVHKSSQSQRQRKITKKSKK
TVLISKPFENASPPLSFPNKSRWNITPKDQRLHKLVFDESGLPDGTEVGYYACGQKLLEG
YKNGLGIICHCCNSEVSPSQFEAHAGWSSRRKPYAHIYTSNGVSLHQLAISLSKGRQYPG
KDNDDLCTICADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQNMFERKRFLQHDA
NAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCE
REFHVGCLKKHKMADLRELPKGKWFCCMDCSRINSVLQNLLVQEAEKLPEFHLNAIKKYA
GNSLETVSDIDVRWRLLSGKAATPETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYG
RNLRGQEFGGMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACI
EKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPELVCPYTESGVLSWSPSREHLCYRK
GSLPVELGVVVLTQRNALVGWKWDEGWLRFWGSGNQIAL
The BLAST search returned 7 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001893
(999 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2040550 - symbol:AT2G36720 "AT2G36720" species... 1611 3.7e-207 2
TAIR|locus:2201021 - symbol:AT1G05380 "AT1G05380" species... 260 2.2e-39 2
TAIR|locus:2147391 - symbol:AT5G36740 species:3702 "Arabi... 248 3.5e-36 3
TAIR|locus:2178828 - symbol:AT5G58610 "AT5G58610" species... 202 4.8e-33 4
TAIR|locus:2086395 - symbol:ROS4 "AT3G14980" species:3702... 224 2.2e-31 3
TAIR|locus:2832118 - symbol:AT5G36670 species:3702 "Arabi... 248 9.2e-31 3
TAIR|locus:2163961 - symbol:AT5G63900 "AT5G63900" species... 209 9.0e-25 3
TAIR|locus:2168088 - symbol:AT5G59830 "AT5G59830" species... 190 1.9e-11 1
ZFIN|ZDB-GENE-071008-4 - symbol:aire "autoimmune regulato... 179 4.6e-10 1
UNIPROTKB|C9JFR1 - symbol:AIRE "Autoimmune regulator" spe... 161 3.6e-09 1
UNIPROTKB|F5GWX5 - symbol:CHD4 "Chromodomain-helicase-DNA... 132 8.6e-09 4
UNIPROTKB|E2RHA0 - symbol:CHD4 "Uncharacterized protein" ... 132 8.8e-09 4
UNIPROTKB|F1SLR5 - symbol:CHD4 "Uncharacterized protein" ... 132 8.8e-09 4
UNIPROTKB|Q14839 - symbol:CHD4 "Chromodomain-helicase-DNA... 132 8.8e-09 4
UNIPROTKB|J9NW81 - symbol:CHD4 "Uncharacterized protein" ... 132 9.1e-09 4
MGI|MGI:1344380 - symbol:Chd4 "chromodomain helicase DNA ... 132 1.1e-08 3
UNIPROTKB|E9PU01 - symbol:Chd4 "Protein Chd4" species:101... 132 1.1e-08 3
UNIPROTKB|F1N3F6 - symbol:CHD4 "Uncharacterized protein" ... 132 1.1e-08 4
UNIPROTKB|F1LM59 - symbol:Chd4 "Protein Chd4" species:101... 132 1.2e-08 3
UNIPROTKB|F1NRM1 - symbol:F1NRM1 "Uncharacterized protein... 174 1.5e-08 2
UNIPROTKB|Q5TH12 - symbol:ZMYND8 "Protein kinase C-bindin... 141 2.0e-08 1
UNIPROTKB|H0YF52 - symbol:TRIM66 "Tripartite motif-contai... 157 2.8e-08 1
UNIPROTKB|F1NMG7 - symbol:F1NMG7 "Uncharacterized protein... 163 3.2e-08 1
UNIPROTKB|F1NH79 - symbol:CHD4 "Uncharacterized protein" ... 132 5.3e-08 3
UNIPROTKB|C9JL37 - symbol:AIRE "Autoimmune regulator" spe... 161 7.1e-08 2
UNIPROTKB|F1SNJ6 - symbol:LOC100620590 "Uncharacterized p... 154 7.4e-08 1
UNIPROTKB|I3LQA6 - symbol:AIRE "Uncharacterized protein" ... 159 8.1e-08 1
UNIPROTKB|F1NBP6 - symbol:F1NBP6 "Uncharacterized protein... 157 1.4e-07 3
UNIPROTKB|I3LF49 - symbol:I3LF49 "Uncharacterized protein... 162 1.6e-07 2
UNIPROTKB|F1MFF9 - symbol:Bt.62145 "Uncharacterized prote... 133 1.9e-07 2
UNIPROTKB|F1P5H8 - symbol:TRIM33 "Uncharacterized protein... 166 2.2e-07 2
UNIPROTKB|E1BIC4 - symbol:AIRE "Uncharacterized protein" ... 154 2.8e-07 1
UNIPROTKB|H7C0U2 - symbol:ZMYND8 "Protein kinase C-bindin... 155 5.6e-07 1
UNIPROTKB|I3LBT0 - symbol:I3LBT0 "Uncharacterized protein... 162 5.7e-07 2
UNIPROTKB|I3LD78 - symbol:I3LD78 "Uncharacterized protein... 162 5.8e-07 2
MGI|MGI:1338803 - symbol:Aire "autoimmune regulator (auto... 151 5.8e-07 1
UNIPROTKB|E7EN20 - symbol:TRIM33 "E3 ubiquitin-protein li... 160 6.6e-07 2
UNIPROTKB|O15164 - symbol:TRIM24 "Transcription intermedi... 154 6.7e-07 1
UNIPROTKB|E2RNG5 - symbol:LOC609728 "Uncharacterized prot... 154 6.7e-07 1
DICTYBASE|DDB_G0277341 - symbol:DDB_G0277341 "PHD zinc fi... 147 7.4e-07 2
UNIPROTKB|J3QQU3 - symbol:PHF12 "PHD finger protein 12" s... 126 7.8e-07 1
UNIPROTKB|O15016 - symbol:TRIM66 "Tripartite motif-contai... 157 8.2e-07 3
TAIR|locus:2162509 - symbol:AT5G22760 "AT5G22760" species... 131 8.7e-07 2
ZFIN|ZDB-GENE-030131-2773 - symbol:trim33 "tripartite mot... 153 9.9e-07 1
UNIPROTKB|H0Y612 - symbol:TRIM33 "E3 ubiquitin-protein li... 160 1.0e-06 2
RGD|1307339 - symbol:Trim33 "tripartite motif-containing ... 160 1.4e-06 2
FB|FBgn0029861 - symbol:CG3815 species:7227 "Drosophila m... 138 1.4e-06 2
MGI|MGI:2137357 - symbol:Trim33 "tripartite motif-contain... 160 1.5e-06 2
UNIPROTKB|C9J9G2 - symbol:PHF12 "PHD finger protein 12" s... 131 1.8e-06 2
UNIPROTKB|Q9UPN9 - symbol:TRIM33 "E3 ubiquitin-protein li... 160 1.8e-06 2
UNIPROTKB|F1MNE1 - symbol:TRIM33 "Uncharacterized protein... 159 1.8e-06 2
FB|FBgn0023395 - symbol:Chd3 "Chd3" species:7227 "Drosoph... 149 1.9e-06 1
MGI|MGI:1924057 - symbol:Phf12 "PHD finger protein 12" sp... 134 2.1e-06 2
UNIPROTKB|F1PLN6 - symbol:TRIM33 "Uncharacterized protein... 157 2.2e-06 2
ZFIN|ZDB-GENE-030131-3876 - symbol:phf12a "PHD finger pro... 136 2.2e-06 2
FB|FBgn0262519 - symbol:Mi-2 species:7227 "Drosophila mel... 138 2.3e-06 2
TAIR|locus:2173179 - symbol:AT5G13660 "AT5G13660" species... 145 2.5e-06 1
UNIPROTKB|F1PT90 - symbol:TRIM66 "Uncharacterized protein... 154 2.5e-06 3
UNIPROTKB|F1NX04 - symbol:PHF12 "Uncharacterized protein"... 133 2.6e-06 2
CGD|CAL0003038 - symbol:orf19.6506 species:5476 "Candida ... 126 2.8e-06 2
UNIPROTKB|Q2TAK2 - symbol:PHF12 "PHF12 protein" species:9... 131 2.8e-06 2
UNIPROTKB|O43918 - symbol:AIRE "Autoimmune regulator" spe... 154 2.9e-06 2
UNIPROTKB|D4AB82 - symbol:Trim24 "Protein Trim24" species... 148 3.0e-06 1
UNIPROTKB|H0Y9U6 - symbol:WHSC1 "Histone-lysine N-methylt... 139 3.0e-06 1
RGD|1311139 - symbol:Aire "autoimmune regulator" species:... 151 3.0e-06 2
UNIPROTKB|E2QYC0 - symbol:PHF12 "Uncharacterized protein"... 131 3.4e-06 2
UNIPROTKB|K7EQP5 - symbol:PHF12 "PHD finger protein 12" s... 120 3.4e-06 1
UNIPROTKB|F1PPM4 - symbol:AIRE "Uncharacterized protein" ... 154 3.6e-06 2
MGI|MGI:109275 - symbol:Trim24 "tripartite motif-containi... 147 3.8e-06 1
UNIPROTKB|H7C2H0 - symbol:CHD3 "Chromodomain-helicase-DNA... 143 4.0e-06 1
ZFIN|ZDB-GENE-030131-5913 - symbol:trim24 "tripartite mot... 158 4.0e-06 2
UNIPROTKB|F1P4C7 - symbol:TRIM24 "Uncharacterized protein... 146 4.2e-06 1
UNIPROTKB|E1B7A1 - symbol:PHF12 "Uncharacterized protein"... 131 4.3e-06 2
UNIPROTKB|Q96QT6 - symbol:PHF12 "PHD finger protein 12" s... 131 4.3e-06 2
UNIPROTKB|F1RNA4 - symbol:PHF12 "Uncharacterized protein"... 131 4.3e-06 2
UNIPROTKB|E9PTL0 - symbol:Zmynd8 "Protein Zmynd8" species... 146 5.0e-06 1
TAIR|locus:2195945 - symbol:AT1G77250 "AT1G77250" species... 104 5.4e-06 3
UNIPROTKB|B5MCJ9 - symbol:TRIM66 "Tripartite motif-contai... 157 5.5e-06 3
SGD|S000004680 - symbol:RCO1 "Essential subunit of the hi... 124 5.7e-06 3
UNIPROTKB|Q96L73 - symbol:NSD1 "Histone-lysine N-methyltr... 152 5.8e-06 5
UNIPROTKB|D4AC30 - symbol:D4AC30 "Uncharacterized protein... 126 8.0e-06 2
UNIPROTKB|F1ST12 - symbol:CHD3 "Uncharacterized protein" ... 147 8.1e-06 1
UNIPROTKB|K7EJ43 - symbol:PHF12 "PHD finger protein 12" s... 131 8.4e-06 1
ZFIN|ZDB-GENE-030131-2581 - symbol:whsc1 "Wolf-Hirschhorn... 136 8.8e-06 3
MGI|MGI:2152406 - symbol:Trim66 "tripartite motif-contain... 152 9.0e-06 3
UNIPROTKB|F1RGC2 - symbol:TRIM66 "Uncharacterized protein... 151 1.2e-05 2
UNIPROTKB|F1LPP8 - symbol:Chd3 "Protein Chd3" species:101... 140 1.3e-05 1
MGI|MGI:1276574 - symbol:Whsc1 "Wolf-Hirschhorn syndrome ... 137 1.4e-05 3
UNIPROTKB|F1LM99 - symbol:F1LM99 "Uncharacterized protein... 126 1.4e-05 2
RGD|1595847 - symbol:Trim66 "tripartite motif-containing ... 147 1.4e-05 2
UNIPROTKB|F1SBF4 - symbol:ZMYND8 "Uncharacterized protein... 141 1.4e-05 1
UNIPROTKB|B7ZM62 - symbol:ZMYND8 "ZMYND8 protein" species... 141 1.7e-05 1
UNIPROTKB|F1N544 - symbol:CHD3 "Uncharacterized protein" ... 144 1.7e-05 1
UNIPROTKB|Q2HXV1 - symbol:ZMYND8 "RACK7 isoform l" specie... 141 1.8e-05 1
UNIPROTKB|Q2HXV3 - symbol:ZMYND8 "Protein kinase C-bindin... 141 1.8e-05 1
UNIPROTKB|E2R8R1 - symbol:ZMYND8 "Uncharacterized protein... 141 1.9e-05 1
UNIPROTKB|J3KPU3 - symbol:ZMYND8 "Protein kinase C-bindin... 141 1.9e-05 1
UNIPROTKB|Q12873 - symbol:CHD3 "Chromodomain-helicase-DNA... 143 2.2e-05 1
UNIPROTKB|E9PG89 - symbol:CHD3 "Chromodomain-helicase-DNA... 143 2.2e-05 1
POMBASE|SPAC2F7.07c - symbol:cph2 "Clr6 histone deacetyla... 119 2.3e-05 2
WARNING: Descriptions of 73 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2040550 [details] [associations]
symbol:AT2G36720 "AT2G36720" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009630 "gravitropism" evidence=RCA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016746 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 HSSP:Q14839 eggNOG:NOG145066 EMBL:AY093116
EMBL:BT008812 IPI:IPI00537974 RefSeq:NP_850270.1 UniGene:At.37517
ProteinModelPortal:Q8RWG0 SMR:Q8RWG0 PaxDb:Q8RWG0 PRIDE:Q8RWG0
EnsemblPlants:AT2G36720.1 GeneID:818244 KEGG:ath:AT2G36720
TAIR:At2g36720 HOGENOM:HOG000149118 InParanoid:Q8RWG0 OMA:DSCPRAF
PhylomeDB:Q8RWG0 ProtClustDB:CLSN2680077 Genevestigator:Q8RWG0
Uniprot:Q8RWG0
Length = 1007
Score = 1611 (572.2 bits), Expect = 3.7e-207, Sum P(2) = 3.7e-207
Identities = 296/502 (58%), Positives = 381/502 (75%)
Query: 442 ELTRNSSRPGLIANSTPVTSVHKSSQSQRQRKITKKSKKTVLISKPFENASPPLSFPNKS 501
++TR + R L+ + S + SSQ + + K K + + K ++ S LS +K
Sbjct: 454 KITRKALRQALVGKAYLSASTNVSSQKKCRSKFKKMLTQHSVTPKALKSVS--LSVSSKK 511
Query: 502 R-WNITPKDQRLHKLVFDESGLPDGTEVGYYACGQKLLEGYKNGLGIICHCCNSEVSPSQ 560
R + + KDQ LHKLVFD GLP+GTE+GYYA GQKLL GYK G GI C+CC EVSPS
Sbjct: 512 RSYRLARKDQGLHKLVFDRGGLPEGTELGYYARGQKLLGGYKMGAGIYCYCCKCEVSPSL 571
Query: 561 FEAHAGWSSRRKPYAHIYTSNGVSLHQLAISLSKGRQYPGKDNDDLCTICADGGNLLPCD 620
FEAHAGW+SRRKPY +IYTSNGVSLH+ A + S GR+Y DN+DLC ICADGGNLL CD
Sbjct: 572 FEAHAGWASRRKPYFYIYTSNGVSLHEWATTFSHGRKYSANDNNDLCVICADGGNLLLCD 631
Query: 621 GCPRAFHKECASLSSIPQGDWYCKYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQITKR 680
CPRAFH EC SL SIP+G+W+CKYC+N F + +++ N+ G++ GVD V+Q+ R
Sbjct: 632 SCPRAFHIECVSLPSIPRGNWHCKYCENKFTSEIAGEYNVNSSAVGQLEGVDPVDQLAGR 691
Query: 681 CIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELP 740
CIR+VKN+EAE +GC+LC G DF +SGFGPRTI++CDQCE+E+H+GCL + DL+ELP
Sbjct: 692 CIRVVKNMEAETNGCVLCSGSDFCRSGFGPRTIIICDQCEKEYHIGCLSSQNIVDLKELP 751
Query: 741 KGKWFCCMDCSRINSVLQNLLVQEAEKLPEFHLNAIK-KYAGNSLETVSDIDVRWRLLSG 799
KG WFC MDC+RINS LQ LL+ AEKL + L I+ K N + ++SD+D+RWRL+SG
Sbjct: 752 KGNWFCSMDCTRINSTLQKLLLGGAEKLSDSSLGIIQTKQERNDVYSISDLDIRWRLISG 811
Query: 800 KAATPETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGMYCAILTVN 859
K +PE+R+LLSQA+AIFHDCFDPIVD +SG +LIP MVYG+ ++GQ++GG+ CA+LTVN
Sbjct: 812 KVTSPESRMLLSQALAIFHDCFDPIVDPLSGSNLIPRMVYGKTMQGQDYGGICCAVLTVN 871
Query: 860 SSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEE 919
++VVSAG+LRVFG+EVAELPLVAT + KGYFQLLF+CIEKLLS L V+SIV+PAAEE
Sbjct: 872 ATVVSAGLLRVFGREVAELPLVATRMCSREKGYFQLLFSCIEKLLSSLNVESIVVPAAEE 931
Query: 920 AESIWTDKFGFKKIDPELVCPY 941
AE +W +KFGF+K+ PE + Y
Sbjct: 932 AEPLWMNKFGFRKLAPEQLSKY 953
Score = 415 (151.1 bits), Expect = 3.7e-207, Sum P(2) = 3.7e-207
Identities = 116/318 (36%), Positives = 162/318 (50%)
Query: 80 NSKIHEGRINKVVKNVLNENGILES-VVE-EENQLVQMTVE--NVIEETVKGKKAPICKE 135
N+ + VV L G+ ES VE + + LV + ++ N +E + I E
Sbjct: 113 NTLVESSSGKVVVIERLVTGGLAESPAVETDSSSLVDVVIDDINFVELLHEAIPVEILSE 172
Query: 136 EPIS-KVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPVEVLVTQSEGFGNESMSLIE 194
+ +V+ K S +++K K+ + K + + +V + N +E
Sbjct: 173 GSLDFEVKRLGTKVRTMGKSYSVSEK--KKHGSFKRTAQIYKSIVRMKK-VNNLVPENVE 229
Query: 195 VEAIAE-G-SALTSPKKNLELKMSKKISLNKKPMTVTELFETGLLDGVSVVYMGGIKFQA 252
V A + G L ++ L K I + +P TV +LFETGLLDG+SVVYMG +K QA
Sbjct: 230 VLAEPDFGREGLDEQSHSVSLA-DKSILIRSRPETVRDLFETGLLDGLSVVYMGTVKSQA 288
Query: 253 SXXXXXXXXXXXXCSCSLCNGCRVIPPSKFEIHACKQYRRASQYICFENGKSLLEVLRAC 312
CSCS C+ VI SKFEIHACKQYRRASQYICFENGKSLL+VL
Sbjct: 289 FPLRGIIRDGGILCSCSSCDWANVISTSKFEIHACKQYRRASQYICFENGKSLLDVLNIS 348
Query: 313 RSVPLPMLKATLQSALSSLPEEKSFACVRCKGTFPITCVGKTGPGPLCNSCVKSKKPQGT 372
R+ PL L+AT+ A+ +EK F C RCKG FP + +G G LC SC + + Q +
Sbjct: 349 RNTPLHALEATILDAVDYASKEKRFTCKRCKGPFPFSSLGHRGF--LCKSCSEVETSQAS 406
Query: 373 MTYTTGIRIRASGPKLVS 390
+ T R S P ++
Sbjct: 407 LAAT---RTSTSAPACIT 421
Score = 111 (44.1 bits), Expect = 5.2e-175, Sum P(2) = 5.2e-175
Identities = 36/129 (27%), Positives = 64/129 (49%)
Query: 1 MKRELDYELAGSLDETSTQSLPQAGIQASDCVKAACEN-VRCKRFKVTKVNGFIVYSRVK 59
MK +L E S+ ++ + L G +C +A + CKR K T+VNGFIVY+R +
Sbjct: 1 MKEDLVPESNSSVWQSPVKRLAVDG----ECGEAGDRSRTSCKRIKTTQVNGFIVYTRTR 56
Query: 60 RSRFSNSDDLLEDDVIDKRINSKIHEGRINKVVKNVLNENGILESVVEEENQLVQMTVEN 119
+++F+ + ED+ + +++ + E + V + + S V E N V+N
Sbjct: 57 KTKFTKLHEQ-EDE--NAGLSNHLEESKPTSGVTSGFGGDMCRSSSVGETNVSGSSCVKN 113
Query: 120 VIEETVKGK 128
+ E+ GK
Sbjct: 114 TLVESSSGK 122
Score = 79 (32.9 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 39/139 (28%), Positives = 56/139 (40%)
Query: 519 ESGLPDGTEVGYYAC--GQKL-LEGYKNGLGIICHC--CN--SEVSPSQFEAHAGWSSRR 571
E+GL DG V Y Q L G GI+C C C+ + +S S+FE HA RR
Sbjct: 269 ETGLLDGLSVVYMGTVKSQAFPLRGIIRDGGILCSCSSCDWANVISTSKFEIHACKQYRR 328
Query: 572 KPYAHIYTSNGVSLHQLAISLSKGRQYPGKDNDDLCTI-CADGGNLLPCDGCPRAFHKEC 630
+I NG SL + +++S+ + L + A C C F
Sbjct: 329 ASQ-YICFENGKSLLDV-LNISRNTPLHALEATILDAVDYASKEKRFTCKRCKGPF---- 382
Query: 631 ASLSSIPQGDWYCKYCQNM 649
SS+ + CK C +
Sbjct: 383 -PFSSLGHRGFLCKSCSEV 400
Score = 72 (30.4 bits), Expect = 2.7e-37, Sum P(2) = 2.7e-37
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 454 ANSTPVTSVHKSSQSQRQRKITKKSKKTVLISKPFENASPPLSFPNKSR 502
+ ST ++ V SS RKIT+K+ + L+ K + +AS +S K R
Sbjct: 435 SESTSISPVFMSSLGNSTRKITRKALRQALVGKAYLSASTNVSSQKKCR 483
>TAIR|locus:2201021 [details] [associations]
symbol:AT1G05380 "AT1G05380" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IC;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 EMBL:CP002684
GO:GO:0046872 GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181
SUPFAM:SSF55729 GO:GO:0016746 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AC005106 HSSP:Q14839
IPI:IPI00532257 RefSeq:NP_001117233.1 RefSeq:NP_563736.3
UniGene:At.15326 ProteinModelPortal:Q9ZW00 SMR:Q9ZW00 PRIDE:Q9ZW00
EnsemblPlants:AT1G05380.1 EnsemblPlants:AT1G05380.2 GeneID:837039
KEGG:ath:AT1G05380 TAIR:At1g05380 InParanoid:Q9ZW00 OMA:RIRSSIK
PhylomeDB:Q9ZW00 ProtClustDB:CLSN2699134 Genevestigator:Q9ZW00
Uniprot:Q9ZW00
Length = 1138
Score = 260 (96.6 bits), Expect = 2.2e-39, Sum P(2) = 2.2e-39
Identities = 75/245 (30%), Positives = 115/245 (46%)
Query: 698 CRGCDFSKSGFGPR----TILLCDQCEREFHVGCL--KKHKMADLRELPKGKWFCCMDCS 751
C+ CD + + G ++L C CER +H CL + HK+ + FC C
Sbjct: 669 CKFCDAAVASGGKDGNFISLLSCGMCERRYHQLCLNDEAHKV---QSFGSASSFCGPKCL 725
Query: 752 RINSVLQNLLVQEAEKLPEFHLNAIKKYAGNSLETVSDIDVRWRLLSGKAATPETRLLLS 811
+ LQ L + E + + I + ++T SD + + A E L+
Sbjct: 726 ELFEKLQKYLGVKTEIEGGYSWSLIHR-----VDTDSDTNSQM-----SAQRIENNSKLA 775
Query: 812 QAVAIFHDCFDPIVDSISGRDLIPSMVY--GRNLRGQEFGGMYCAILTVNSSVVSAGILR 869
+AI +CF PIVD SG DLI +++Y G N + G Y AIL ++SA LR
Sbjct: 776 VGLAIMDECFLPIVDRRSGVDLIRNVLYNCGSNFNRINYTGFYTAILERGDEIISAASLR 835
Query: 870 VFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFG 929
G ++AE+P + T I +G + LF IE + L+V+ +V+PA + WT FG
Sbjct: 836 FHGMQLAEMPFIGTRHIYRRQGMCRRLFDAIESAMRSLKVEKLVIPAIPDFLHAWTGNFG 895
Query: 930 FKKID 934
F +D
Sbjct: 896 FTPLD 900
Score = 255 (94.8 bits), Expect = 2.2e-39, Sum P(2) = 2.2e-39
Identities = 75/226 (33%), Positives = 108/226 (47%)
Query: 441 W-ELTRNSSRPGLIANSTPVTSVHKSSQSQRQRKITKKSKKTVLISKPFENASPPLSFPN 499
W EL + S R N+ P S S RK K + T+L+ + +P ++ N
Sbjct: 455 WDELHKKSKRSLYYNNARP--SCGSDSHYLHGRKTKKIGRCTLLVRSSKDKKNPAINGFN 512
Query: 500 KSRWNITPKDQRLHKLVFDESGLPD-GTEVGYYAC-GQK-LLEGYKNGLGIICHCCNSEV 556
+ K L L+ ESG+ +V Y G K +LEG+ GI C CC+ +
Sbjct: 513 P----YSGKRTLLSWLI--ESGVVQLRQKVQYMRRRGAKVMLEGWITREGIHCDCCSKIL 566
Query: 557 SPSQFEAHAGWSSRRKPYAHIYTSNGVSLHQLAI---SLSKGR--------QYPGKD-ND 604
+ S+FE HAG S +P+ +IY +G SL Q + ++ K G D ND
Sbjct: 567 TVSRFEIHAG-SKSCQPFQNIYLESGASLLQCQVRAWNMQKDATNLALHQVDTDGDDPND 625
Query: 605 DLCTICADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQNMF 650
D C IC DGG+L+ CDGCP +H+ C + +P GDW+C C F
Sbjct: 626 DACGICGDGGDLICCDGCPSTYHQNCLGMQVLPSGDWHCPNCTCKF 671
Score = 65 (27.9 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 271 CNGC-RVIPPSKFEIHACKQYRRASQYICFENGKSLLE 307
C+ C +++ S+FEIHA + + Q I E+G SLL+
Sbjct: 559 CDCCSKILTVSRFEIHAGSKSCQPFQNIYLESGASLLQ 596
>TAIR|locus:2147391 [details] [associations]
symbol:AT5G36740 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
SMART:SM00384 EMBL:CP002688 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 InterPro:IPR020478 PRINTS:PR00929 Gene3D:3.40.630.30
InterPro:IPR016181 SUPFAM:SSF55729 GO:GO:0016746 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 UniGene:At.55161 IPI:IPI00544011
RefSeq:NP_568540.1 UniGene:At.55166 ProteinModelPortal:F4K4H9
SMR:F4K4H9 EnsemblPlants:AT5G36740.1 GeneID:833643
KEGG:ath:AT5G36740 OMA:IDTWTSG Uniprot:F4K4H9
Length = 1179
Score = 248 (92.4 bits), Expect = 3.5e-36, Sum P(3) = 3.5e-36
Identities = 58/173 (33%), Positives = 84/173 (48%)
Query: 537 LLEGYKNGLGIICHCCNSEVSPSQFEAHAGWSSRRKPYAHIYTSNGVSLHQ-LAISLSK- 594
LLEG GI C+CC+ S FE HAG +R +P+ +Y G SL Q L S++K
Sbjct: 572 LLEGIITKEGIRCNCCDEVFSVLDFEVHAG-GNRNQPFKSLYLEGGNSLLQCLHESMNKQ 630
Query: 595 ------GRQY----PGKDNDDLCTICADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCK 644
G + G NDD C IC DGG+L+ CDGCP FH+ C + P G WYC
Sbjct: 631 SESQLKGYHFVDFGSGDPNDDTCGICGDGGDLICCDGCPSTFHQSCLDIKKFPSGAWYCY 690
Query: 645 YCQNMF-ERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCL 696
C F E+ +H+ + + + + S ++C + + A+ C+
Sbjct: 691 NCSCKFCEKDEAAKHETSTLPS-----LSSCRLCEEKCSKHYPHTLADHQACI 738
Score = 202 (76.2 bits), Expect = 3.5e-36, Sum P(3) = 3.5e-36
Identities = 55/193 (28%), Positives = 93/193 (48%)
Query: 745 FCCMDCSRINSVLQNLLVQEAEKLPE-FHLNAIKKYAGNSLETVSDIDVRWRLLSGKAAT 803
FC C + LQ L + LPE F + ++++ S V+D D+ S K A
Sbjct: 753 FCGKYCQELFEELQ-LFIGVKHPLPEGFSWSFLRRFELPS--EVADCDI-----SEKIAY 804
Query: 804 PETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVY--GRNLRGQEFGGMYCAILTVNSS 861
++ A ++ +CF P+VD SG +L+ ++VY G N +F A+L
Sbjct: 805 ---NAKMAVAFSVMDECFSPLVDHRSGVNLLQNIVYNFGSNFHRLDFSSFLTAVLERGDE 861
Query: 862 VVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAE 921
+++ +R+ G ++AE+P + T + +G + L IE L L+V +V+PA E
Sbjct: 862 IIAVASIRIHGNQLAEMPFIGTRYMYRRQGMCRRLMDGIESALGSLKVDKLVIPAVPELI 921
Query: 922 SIWTDKFGFKKID 934
WT FGF ++
Sbjct: 922 DTWTSGFGFAPVN 934
Score = 85 (35.0 bits), Expect = 3.5e-36, Sum P(3) = 3.5e-36
Identities = 47/176 (26%), Positives = 72/176 (40%)
Query: 2 KRELDYELAGSLDETSTQSLPQAGIQASDCVKAACENV-RCKRFKVTKVNGFIVYSRVKR 60
++ D + S+++ S + G + V ENV K K ++ RV R
Sbjct: 7 QKGFDLNVCASIEDFSESDIKAEG-ETDSLVDGNVENVIEIKDKKKVIEREILITRRVLR 65
Query: 61 SRFSNSDDLLEDDVIDKRINSK---IHEGRINKVVKNVLNENGILESVVEEENQLVQMTV 117
S S + DL+ D K + K + G VK + + + +S+V EE +
Sbjct: 66 SG-SVARDLVNSDKHCKAVKRKGNVVSGGSSVDEVKEEVKQECV-KSLVPEEIRGDDFRS 123
Query: 118 ENVIEETVKGKKAPICKEEPISKVECFPRKEGGSEVS--NGLNKKCLKRPSAMKPK 171
E +E K ++ KEE + + PRK G S S NGL C R S K K
Sbjct: 124 EVKVES--KDDRSDDGKEEKVQRKRGRPRKFGMSSQSDDNGLISNCKLRTSLGKKK 177
Score = 78 (32.5 bits), Expect = 2.1e-18, Sum P(3) = 2.1e-18
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 713 ILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCS 751
++ CD C FH CL D+++ P G W+C +CS
Sbjct: 662 LICCDGCPSTFHQSCL------DIKKFPSGAWYC-YNCS 693
Score = 55 (24.4 bits), Expect = 2.0e-16, Sum P(4) = 2.0e-16
Identities = 30/105 (28%), Positives = 38/105 (36%)
Query: 271 CNGC-RVIPPSKFEIHACKQYRRASQYICFENGKSLLEVLR-ACRSVPLPMLKATLQSAL 328
CN C V FE+HA + + + E G SLL+ L + LK
Sbjct: 584 CNCCDEVFSVLDFEVHAGGNRNQPFKSLYLEGGNSLLQCLHESMNKQSESQLKGYHFVDF 643
Query: 329 SSLPEEKSFACVRC-KGTFPITCVGKTGPGPLCNSCVKSKK-PQG 371
S + C C G I C G P SC+ KK P G
Sbjct: 644 GS-GDPNDDTCGICGDGGDLICCDGC--PSTFHQSCLDIKKFPSG 685
Score = 48 (22.0 bits), Expect = 2.0e-16, Sum P(4) = 2.0e-16
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 625 AFHKECASLSSIPQG----DWYC-KYCQNMFE 651
A H+ C + G D +C KYCQ +FE
Sbjct: 732 ADHQACINQDGTVPGERSTDSFCGKYCQELFE 763
Score = 47 (21.6 bits), Expect = 3.1e-15, Sum P(3) = 3.1e-15
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 733 MADLRELPKGKWFCCMDCSRINSVLQNLLVQE 764
M D +P CMDC + + +L+ ++ +E
Sbjct: 549 MIDSTIVPLNGKVQCMDCKKTDILLEGIITKE 580
Score = 40 (19.1 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 695 CLLCRGCDFSKSGFGPRTILLCDQCEREFHV 725
C+ C+ D G + + C+ C+ F V
Sbjct: 563 CMDCKKTDILLEGIITKEGIRCNCCDEVFSV 593
>TAIR|locus:2178828 [details] [associations]
symbol:AT5G58610 "AT5G58610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0042991
"transcription factor import into nucleus" evidence=RCA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 INTERPRO:IPR008395 EMBL:CP002688 GO:GO:0046872
GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Pfam:PF05641 InterPro:IPR014002
SMART:SM00743 IPI:IPI00519073 RefSeq:NP_200669.1 UniGene:At.55614
ProteinModelPortal:F4KGA3 SMR:F4KGA3 EnsemblPlants:AT5G58610.1
GeneID:835975 KEGG:ath:AT5G58610 OMA:RITQDWN Uniprot:F4KGA3
Length = 1065
Score = 202 (76.2 bits), Expect = 4.8e-33, Sum P(4) = 4.8e-33
Identities = 43/134 (32%), Positives = 73/134 (54%)
Query: 802 ATPETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGR--NLRGQEFGGMYCAILTVN 859
A E +LS A+ + H+ F+P+ GRDL +++ R + F G Y +L N
Sbjct: 814 AAAENHCILSVALDVMHELFEPVKRPHGGRDLAEDVIFSRWSKFKRLNFSGFYTVLLERN 873
Query: 860 SSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEE 919
+ +VS +R+ G++VAE+P + T + +G ++L +EK+L L V+ +VLPA
Sbjct: 874 NELVSVATVRILGKKVAEMPFIGTRFQHRQRGMCRVLINELEKVLIDLGVERLVLPAVPC 933
Query: 920 AESIWTDKFGFKKI 933
+ W + FGF K+
Sbjct: 934 VLNTWINSFGFTKM 947
Score = 201 (75.8 bits), Expect = 4.8e-33, Sum P(4) = 4.8e-33
Identities = 62/192 (32%), Positives = 86/192 (44%)
Query: 471 QRKITKKSKKTVLIS-KPFENASPPLSFPNKSRWNITPKDQRLHKLVFDESGLPDGTEVG 529
+ ++T + K VL S K + P+S + R NI L L+ + LP
Sbjct: 556 KNRVTSRGKTRVLRSRKRAQRVITPISRKHSPR-NI------LSWLMDNNVVLP---REN 605
Query: 530 YYACGQKLLEGYKNGL----GIICHCCNSEVSPSQFEAHAGWSSRRKPYAHIYTSNGVSL 585
C QK K G GI C CC + + FE HA +S A+I+ +G SL
Sbjct: 606 IRCCNQKDTTVRKEGKLTREGIKCSCCRRVFTINGFEVHANGASCSGA-ANIFLDDGRSL 664
Query: 586 HQLAISLSKGR---QYPGK--------DNDDLCTICADGGNLLPCDGCPRAFHKECASLS 634
+ + K R Q P +ND C++C GG L+ CDGCP AFH C L
Sbjct: 665 LECQVEAYKKRKKAQPPDMLKMKLRQGENDVFCSVCHYGGKLILCDGCPSAFHANCLGLE 724
Query: 635 SIPQGDWYCKYC 646
+P GDW+C+ C
Sbjct: 725 DVPDGDWFCQSC 736
Score = 90 (36.7 bits), Expect = 4.8e-33, Sum P(4) = 4.8e-33
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 716 CDQCEREFHVGCLKKHKMAD-LRELPKGKWFCCMDCSRINSVLQNLLVQEAEKL 768
C QCE ++H CL+ D L ++ KWFC DC S+ N+ +A K+
Sbjct: 761 CKQCELKYHPSCLRYDGACDSLDKILGEKWFCSKDCEE--SLEPNMYGDDASKI 812
Score = 80 (33.2 bits), Expect = 5.2e-16, Sum P(3) = 5.2e-16
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 713 ILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDC 750
++LCD C FH CL L ++P G WFC C
Sbjct: 706 LILCDGCPSAFHANCL------GLEDVPDGDWFCQSCC 737
Score = 65 (27.9 bits), Expect = 9.5e-18, Sum P(3) = 9.5e-18
Identities = 31/110 (28%), Positives = 45/110 (40%)
Query: 268 CSLCNGCRVIPPSKFEIHACKQYRRASQYICFENGKSLLEVL-----RACRSVPLPMLKA 322
CS C RV + FE+HA + I ++G+SLLE + ++ P MLK
Sbjct: 629 CSCCR--RVFTINGFEVHANGASCSGAANIFLDDGRSLLECQVEAYKKRKKAQPPDMLKM 686
Query: 323 TLQSALSSL------PEEKSFACVRCKGTFPITCVG-KTGP-GP-LCNSC 363
L+ + + K C C F C+G + P G C SC
Sbjct: 687 KLRQGENDVFCSVCHYGGKLILCDGCPSAFHANCLGLEDVPDGDWFCQSC 736
Score = 58 (25.5 bits), Expect = 4.8e-33, Sum P(4) = 4.8e-33
Identities = 27/98 (27%), Positives = 45/98 (45%)
Query: 272 NGCRVIPPSKFEIHAC--KQYRRASQYICFENGKSLLEVLRACRSVPLPMLKATLQSALS 329
+G I P + + +C K ++ ASQ C S+L + RS + KAT S+
Sbjct: 268 SGMLTIAPQEHQF-SCIDKDFKPASQR-C--QSLSVLTSVSGIRSEASDINKATEISSKK 323
Query: 330 SLPEEKSFACVRCKGTF-PITCVGKTGPGPLCNSCVKS 366
S K + G + P C+ K+GP + +S ++S
Sbjct: 324 STAAHKKDILHKKPGIWHPFDCLAKSGPQAV-SSFIRS 360
Score = 54 (24.1 bits), Expect = 4.5e-14, Sum P(3) = 4.5e-14
Identities = 16/57 (28%), Positives = 23/57 (40%)
Query: 617 LPCDGCPRAFHKECA-------SLSSIPQGDWYC-KYCQNMFERKRFLQHDANAVEA 665
+ C C +H C SL I W+C K C+ E + DA+ +EA
Sbjct: 759 ISCKQCELKYHPSCLRYDGACDSLDKILGEKWFCSKDCEESLEPNMY-GDDASKIEA 814
Score = 42 (19.8 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 324 LQSALSSLPEEKSFACVRCKGTFPITCVGKTGPGPLCNSCVK 365
L++ ++ EEK +C +C+ + +C+ G C+S K
Sbjct: 746 LKTTSTNAKEEKFISCKQCELKYHPSCLRYDGA---CDSLDK 784
Score = 40 (19.1 bits), Expect = 3.4e-31, Sum P(4) = 3.4e-31
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 322 ATLQSALSSLPEEKSFACV 340
A L L+ P+E F+C+
Sbjct: 265 ACLSGMLTIAPQEHQFSCI 283
>TAIR|locus:2086395 [details] [associations]
symbol:ROS4 "AT3G14980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0007267 "cell-cell signaling"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0010267 "production of ta-siRNAs involved in RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA] [GO:0010385
"double-stranded methylated DNA binding" evidence=IPI] [GO:0042393
"histone binding" evidence=IDA] [GO:0043971 "histone H3-K18
acetylation" evidence=IDA] [GO:0043972 "histone H3-K23 acetylation"
evidence=IDA] [GO:0044030 "regulation of DNA methylation"
evidence=IMP] [GO:0044154 "histone H3-K14 acetylation"
evidence=IDA] [GO:0080188 "RNA-directed DNA methylation"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000182
InterPro:IPR001739 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS51186 SMART:SM00184
SMART:SM00249 GO:GO:0009506 GO:GO:0005634 EMBL:CP002686
GO:GO:0046872 GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181
SUPFAM:SSF55729 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0042393 Gene3D:3.30.890.10
GO:GO:0044030 GO:GO:0044154 GO:GO:0004402 GO:GO:0010385
GO:GO:0043971 UniGene:At.53322 UniGene:At.73310 IPI:IPI00540986
RefSeq:NP_188116.1 ProteinModelPortal:F4IXE7 SMR:F4IXE7
PRIDE:F4IXE7 EnsemblPlants:AT3G14980.1 GeneID:820727
KEGG:ath:AT3G14980 OMA:AECNSKL GO:GO:0043972 GO:GO:0080188
Uniprot:F4IXE7
Length = 1189
Score = 224 (83.9 bits), Expect = 2.2e-31, Sum P(3) = 2.2e-31
Identities = 62/223 (27%), Positives = 111/223 (49%)
Query: 716 CDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRINSVLQNLLVQEAEKLPEFHLNA 775
C QC ++H CL+ ++ R+L +FC +C ++ + L + + +
Sbjct: 789 CSQCAHKYHGTCLQG--ISKRRKLFPETYFCGKNCEKVYNGLSSRVGIINPNADGLSWSI 846
Query: 776 IKKYAGNSLETVSDIDVRWRLLSGKAATPETRLLLSQAVAIFHDCFDPIVDSISGRDLIP 835
+K + + + + R L+ KA E L+ A++I + F +VD +G D+IP
Sbjct: 847 LKCFQEDGMVHSA------RRLALKA---ECNSKLAVALSIMEESFLSMVDPRTGIDMIP 897
Query: 836 SMVY--GRNLRGQEFGGMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYF 893
++Y G +F G Y ++ + ++S +RV G +AE+PLVAT +G
Sbjct: 898 HVLYNWGSTFARLDFDGFYTVVVEKDDVMISVASIRVHGVTIAEMPLVATCSKYRRQGMC 957
Query: 894 QLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPE 936
++L A IE++L L+V+ +V+ A WT+ FGFK +D E
Sbjct: 958 RILVAAIEEMLMSLKVEKLVVAALPSLVETWTEGFGFKPMDDE 1000
Score = 210 (79.0 bits), Expect = 2.2e-31, Sum P(3) = 2.2e-31
Identities = 43/113 (38%), Positives = 61/113 (53%)
Query: 546 GIICHCCNSEVSPSQFEAHAGWSSRRKPYAHIYTSNG---VSLHQLAISLS-KGRQY--- 598
G++C CCN VS S+F+ HAG++ + P +++ +G S A S K R+
Sbjct: 657 GVVCTCCNKTVSLSEFKNHAGFN-QNCPCLNLFMGSGKPFASCQLEAWSAEYKARRNGWR 715
Query: 599 --PGKD---NDDLCTICADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYC 646
D NDD C +C DGG L+ CD CP FH+ C S+ +P+G WYC C
Sbjct: 716 LEKASDDDPNDDSCGVCGDGGELICCDNCPSTFHQACLSMQVLPEGSWYCSSC 768
Score = 56 (24.8 bits), Expect = 2.2e-31, Sum P(3) = 2.2e-31
Identities = 31/147 (21%), Positives = 67/147 (45%)
Query: 56 SRVKRSRFSNSDDLLEDDVIDKRINSKIHEGRI-----NKVVKNVLNENGILESVVEEEN 110
++V+ +R SN D L ++D I + S E + + +V +V + N + S +E +
Sbjct: 367 NKVEVARNSNPDKLKKEDTICLNLISGCPESVLTVSEGSHLVHDV-DANQEIHSDLEVQT 425
Query: 111 QLVQMTVENVIE-ETVKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMK 169
++ V + +E +++ GK+ E+ SK K ++ + +K L R S
Sbjct: 426 KISSQKVSSRLERQSIIGKEISGTHEQEASK-GIVASKLIAEDMHESVMRKNLHRRSKKI 484
Query: 170 PKVEPVEVLVTQSEGFGNESMSLIEVE 196
++P + Q + + S++ E +
Sbjct: 485 SDIKPASL--DQHDSLDSNSLNSFEFQ 509
>TAIR|locus:2832118 [details] [associations]
symbol:AT5G36670 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
SMART:SM00384 EMBL:CP002688 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 InterPro:IPR020478 PRINTS:PR00929 Gene3D:3.40.630.30
InterPro:IPR016181 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 IPI:IPI00527539 RefSeq:NP_568537.1 UniGene:At.55161
ProteinModelPortal:F4K4G6 SMR:F4K4G6 EnsemblPlants:AT5G36670.1
GeneID:833632 KEGG:ath:AT5G36670 ArrayExpress:F4K4G6 Uniprot:F4K4G6
Length = 1193
Score = 248 (92.4 bits), Expect = 9.2e-31, Sum P(3) = 9.2e-31
Identities = 58/173 (33%), Positives = 84/173 (48%)
Query: 537 LLEGYKNGLGIICHCCNSEVSPSQFEAHAGWSSRRKPYAHIYTSNGVSLHQ-LAISLSK- 594
LLEG GI C+CC+ S FE HAG +R +P+ +Y G SL Q L S++K
Sbjct: 572 LLEGIITKEGIRCNCCDEVFSVLDFEVHAG-GNRNQPFKSLYLEGGNSLLQCLHESMNKQ 630
Query: 595 ------GRQY----PGKDNDDLCTICADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCK 644
G + G NDD C IC DGG+L+ CDGCP FH+ C + P G WYC
Sbjct: 631 SESQLKGYHFVDFGSGDPNDDTCGICGDGGDLICCDGCPSTFHQSCLDIKKFPSGAWYCY 690
Query: 645 YCQNMF-ERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCL 696
C F E+ +H+ + + + + S ++C + + A+ C+
Sbjct: 691 NCSCKFCEKDEAAKHETSTLPS-----LSSCRLCEEKCSKHYPHTLADHQACI 738
Score = 150 (57.9 bits), Expect = 9.2e-31, Sum P(3) = 9.2e-31
Identities = 46/183 (25%), Positives = 85/183 (46%)
Query: 745 FCCMDCSRINSVLQNLLVQEAEKLPE-FHLNAIKKYAGNSLETVSDIDVRWRLLSGKAAT 803
FC C + LQ L + LPE F + ++++ S V+D D+ S K A
Sbjct: 753 FCGKYCQELFEELQ-LFIGVKHPLPEGFSWSFLRRFELPS--EVADCDI-----SEKIAY 804
Query: 804 PETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVY--GRNLRGQEFGGMYCAILTVNSS 861
++ A ++ +CF P+VD SG +L+ ++VY G N +F A+L
Sbjct: 805 ---NAKMAVAFSVMDECFSPLVDHRSGVNLLQNIVYNFGSNFHRLDFSSFLTAVLERGDE 861
Query: 862 VVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAE 921
+++ +R+ G ++AE+P + T + +G + L IE +++ + L +E
Sbjct: 862 IIAVASIRIHGNQLAEMPFIGTRYMYRRQGMCRRLMDGIESFVAYF--SQMFLAISEVLL 919
Query: 922 SIW 924
+W
Sbjct: 920 DVW 922
Score = 85 (35.0 bits), Expect = 9.2e-31, Sum P(3) = 9.2e-31
Identities = 47/176 (26%), Positives = 72/176 (40%)
Query: 2 KRELDYELAGSLDETSTQSLPQAGIQASDCVKAACENV-RCKRFKVTKVNGFIVYSRVKR 60
++ D + S+++ S + G + V ENV K K ++ RV R
Sbjct: 7 QKGFDLNVCASIEDFSESDIKAEG-ETDSLVDGNVENVIEIKDKKKVIEREILITRRVLR 65
Query: 61 SRFSNSDDLLEDDVIDKRINSK---IHEGRINKVVKNVLNENGILESVVEEENQLVQMTV 117
S S + DL+ D K + K + G VK + + + +S+V EE +
Sbjct: 66 SG-SVARDLVNSDKHCKAVKRKGNVVSGGSSVDEVKEEVKQECV-KSLVPEEIRGDDFRS 123
Query: 118 ENVIEETVKGKKAPICKEEPISKVECFPRKEGGSEVS--NGLNKKCLKRPSAMKPK 171
E +E K ++ KEE + + PRK G S S NGL C R S K K
Sbjct: 124 EVKVES--KDDRSDDGKEEKVQRKRGRPRKFGMSSQSDDNGLISNCKLRTSLGKKK 177
Score = 78 (32.5 bits), Expect = 7.4e-13, Sum P(3) = 7.4e-13
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 713 ILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCS 751
++ CD C FH CL D+++ P G W+C +CS
Sbjct: 662 LICCDGCPSTFHQSCL------DIKKFPSGAWYC-YNCS 693
Score = 55 (24.4 bits), Expect = 6.3e-11, Sum P(4) = 6.3e-11
Identities = 30/105 (28%), Positives = 38/105 (36%)
Query: 271 CNGC-RVIPPSKFEIHACKQYRRASQYICFENGKSLLEVLR-ACRSVPLPMLKATLQSAL 328
CN C V FE+HA + + + E G SLL+ L + LK
Sbjct: 584 CNCCDEVFSVLDFEVHAGGNRNQPFKSLYLEGGNSLLQCLHESMNKQSESQLKGYHFVDF 643
Query: 329 SSLPEEKSFACVRC-KGTFPITCVGKTGPGPLCNSCVKSKK-PQG 371
S + C C G I C G P SC+ KK P G
Sbjct: 644 GS-GDPNDDTCGICGDGGDLICCDGC--PSTFHQSCLDIKKFPSG 685
Score = 48 (22.0 bits), Expect = 6.3e-11, Sum P(4) = 6.3e-11
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 625 AFHKECASLSSIPQG----DWYC-KYCQNMFE 651
A H+ C + G D +C KYCQ +FE
Sbjct: 732 ADHQACINQDGTVPGERSTDSFCGKYCQELFE 763
Score = 47 (21.6 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 733 MADLRELPKGKWFCCMDCSRINSVLQNLLVQE 764
M D +P CMDC + + +L+ ++ +E
Sbjct: 549 MIDSTIVPLNGKVQCMDCKKTDILLEGIITKE 580
Score = 40 (19.1 bits), Expect = 5.1e-09, Sum P(3) = 5.1e-09
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 695 CLLCRGCDFSKSGFGPRTILLCDQCEREFHV 725
C+ C+ D G + + C+ C+ F V
Sbjct: 563 CMDCKKTDILLEGIITKEGIRCNCCDEVFSV 593
>TAIR|locus:2163961 [details] [associations]
symbol:AT5G63900 "AT5G63900" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008080
"N-acetyltransferase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000182
InterPro:IPR001965 InterPro:IPR019787 PROSITE:PS50016
PROSITE:PS51186 SMART:SM00184 SMART:SM00249 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729 EMBL:AB007646
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0008080 HSSP:Q14839 EMBL:AB493810
IPI:IPI00518981 RefSeq:NP_201195.1 UniGene:At.55695
ProteinModelPortal:Q9FMZ9 SMR:Q9FMZ9 EnsemblPlants:AT5G63900.1
GeneID:836510 KEGG:ath:AT5G63900 TAIR:At5g63900 eggNOG:NOG244493
HOGENOM:HOG000152567 InParanoid:Q9FMZ9 OMA:NSKLMAC PhylomeDB:Q9FMZ9
ProtClustDB:CLSN2914816 Genevestigator:Q9FMZ9 Uniprot:Q9FMZ9
Length = 557
Score = 209 (78.6 bits), Expect = 9.0e-25, Sum P(3) = 9.0e-25
Identities = 53/180 (29%), Positives = 92/180 (51%)
Query: 774 NAIKKYAGNSLETVSDIDVRWRLL----SGKAATPETRLLLSQAVAIFHDCFDPIVDSIS 829
+A++ G+ + +D D+ W L+ G+ E L AV I H F+P D S
Sbjct: 353 SALENLLGSKIAVGNDGDLVWTLMRAPNEGEHYDDEQISKLESAVEILHQGFEPTNDVFS 412
Query: 830 GRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHG 889
GRDL+ ++Y ++ G G Y ++ + ++ +RV ++V E+PLVAT
Sbjct: 413 GRDLVEELIYRKDRTGVG-RGFYTVLIERKNEPITVAAVRV-DKDVVEIPLVATLSSYRR 470
Query: 890 KGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPELVCPYTESGVLSW 949
G ++L +EK +S + V +VLPAA+E + WT++FGF ++ + G+L +
Sbjct: 471 SGMCRVLMDELEKQMSQMGVCRLVLPAAKEVVTTWTERFGFSVMNSSERLELVKHGMLDF 530
Score = 149 (57.5 bits), Expect = 9.0e-25, Sum P(3) = 9.0e-25
Identities = 25/45 (55%), Positives = 31/45 (68%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECASLSSIPQGD-WYCKYC 646
N D+C +C GG+LL CDGCP AFH C LSS+P+ D W+C C
Sbjct: 255 NCDVCCVCHWGGDLLLCDGCPSAFHHACLGLSSLPEEDLWFCPCC 299
Score = 123 (48.4 bits), Expect = 4.3e-22, Sum P(3) = 4.3e-22
Identities = 29/83 (34%), Positives = 42/83 (50%)
Query: 681 CIRIVKNLEAELSGCLLCRGCDFSKSGFGPRT--ILLCDQCEREFHVGCLKKHKMADLRE 738
C+ + E +L C C CD S P ++ C+QC+R FH+ CLK+ D
Sbjct: 282 CLGLSSLPEEDLWFCPCCC-CDICGSMESPANSKLMACEQCQRRFHLTCLKE----DSCI 336
Query: 739 LPKGKWFCCMDCSRINSVLQNLL 761
+ WFC C+R+ S L+NLL
Sbjct: 337 VSSRGWFCSSQCNRVFSALENLL 359
Score = 83 (34.3 bits), Expect = 5.6e-18, Sum P(3) = 5.6e-18
Identities = 24/71 (33%), Positives = 32/71 (45%)
Query: 713 ILLCDQCEREFHVGCLKKHKMADLRELPKGK-WFC---CMD-CSRINSVLQNLLVQEAEK 767
+LLCD C FH CL L LP+ WFC C D C + S + L+ +
Sbjct: 268 LLLCDGCPSAFHHACL------GLSSLPEEDLWFCPCCCCDICGSMESPANSKLMACEQC 321
Query: 768 LPEFHLNAIKK 778
FHL +K+
Sbjct: 322 QRRFHLTCLKE 332
Score = 67 (28.6 bits), Expect = 5.2e-17, Sum P(4) = 5.2e-17
Identities = 15/52 (28%), Positives = 20/52 (38%)
Query: 607 CTICAD-----GGNLLPCDGCPRAFHKECASLSS--IPQGDWYCK-YCQNMF 650
C IC L+ C+ C R FH C S + W+C C +F
Sbjct: 301 CDICGSMESPANSKLMACEQCQRRFHLTCLKEDSCIVSSRGWFCSSQCNRVF 352
Score = 54 (24.1 bits), Expect = 9.0e-25, Sum P(3) = 9.0e-25
Identities = 20/62 (32%), Positives = 28/62 (45%)
Query: 137 PISKVECFPRK---EGGSEVSNGLNKKCLKRPSAMKPKVEPVEVLVTQSEGFGNESMSLI 193
P + C P E S+VSN KK KR +VE ++V T E + S LI
Sbjct: 99 PKYDLSCLPSNIASESSSDVSNQKQKKSKKRG-----RVEDLDVKSTAPEKDNHPSADLI 153
Query: 194 EV 195
++
Sbjct: 154 KI 155
Score = 53 (23.7 bits), Expect = 6.5e-15, Sum P(3) = 6.5e-15
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 266 CSCSLCNGCRVIP-PSKFEIHACKQYRRASQYICFENGKSLL 306
C C C+ C + P+ ++ AC+Q +R C + ++
Sbjct: 296 CPCCCCDICGSMESPANSKLMACEQCQRRFHLTCLKEDSCIV 337
Score = 46 (21.3 bits), Expect = 5.2e-17, Sum P(4) = 5.2e-17
Identities = 17/46 (36%), Positives = 19/46 (41%)
Query: 297 ICFENGKSLLEVLRACRSVPLPMLKATLQSALSSLPEEKSFACVRC 342
+C G LL C P A L LSSLPEE + C C
Sbjct: 261 VCHWGGDLLL-----CDGCPSAFHHACL--GLSSLPEEDLWFCPCC 299
Score = 46 (21.3 bits), Expect = 3.3e-14, Sum P(3) = 3.3e-14
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 327 ALSSLPEEKSFACVRCKGTFPITCV 351
++ S K AC +C+ F +TC+
Sbjct: 306 SMESPANSKLMACEQCQRRFHLTCL 330
>TAIR|locus:2168088 [details] [associations]
symbol:AT5G59830 "AT5G59830" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0048573 "photoperiodism, flowering" evidence=RCA]
EMBL:CP002688 IPI:IPI00541231 RefSeq:NP_200791.2 RefSeq:NP_974964.1
UniGene:At.29202 UniGene:At.29203 EnsemblPlants:AT5G59830.1
EnsemblPlants:AT5G59830.2 GeneID:836104 KEGG:ath:AT5G59830
OMA:FQAATRE Uniprot:F4JXC7
Length = 425
Score = 190 (71.9 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 47/173 (27%), Positives = 81/173 (46%)
Query: 166 SAMKPKVEPVEVLVTQSEGFGNESMSLIEVEAIAEGSALTSPKKNLELKMSKKISLNKKP 225
S ++ + ++++ Q G S ++ + +A+ S + PK E K SKK + P
Sbjct: 232 SYVQDPIGTLDIVYDQETGSSQTSSGVVSEQQVAKPSLGSLPKTKAEAKSSKKEASTSFP 291
Query: 226 MTVTELFETGLLDGVSVVYMGGIKFQASXXXXXXXXXXXXCSCSLCNGCRVIPPSKFEIH 285
V L TG+LDGV V Y + C C C+ +V+ FE H
Sbjct: 292 SNVRSLISTGMLDGVPVKY---VSVSREELRGVIKGSGYLCGCQTCDFTKVLNAYAFERH 348
Query: 286 A-CKQYRRASQYICFENGKSLLEVLRACRSVPLPMLKATLQSALSSLPEEKSF 337
A CK + + +I FENGK++ ++++ R+ P +L +Q+ S +K+F
Sbjct: 349 AGCKT-KHPNNHIYFENGKTIYQIVQELRNTPESILFDVIQTVFGSPINQKAF 400
>ZFIN|ZDB-GENE-071008-4 [details] [associations]
symbol:aire "autoimmune regulator" species:7955
"Danio rerio" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006959
"humoral immune response" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00184 SMART:SM00249 ZFIN:ZDB-GENE-071008-4 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0045182 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 GeneTree:ENSGT00440000034278 EMBL:BX649390
IPI:IPI00876716 Ensembl:ENSDART00000079317 Bgee:F1Q623
Uniprot:F1Q623
Length = 513
Score = 179 (68.1 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 34/73 (46%), Positives = 42/73 (57%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECA--SLSSIPQGDWYCKYCQ-NMFERKRFLQHD 659
NDD C +C DGG L+ CDGCPRAFH C L+SIP+G W C+ CQ N + + +
Sbjct: 293 NDDECAVCKDGGELICCDGCPRAFHLSCLVPPLTSIPRGTWRCQLCQSNRLKDRTYTHVQ 352
Query: 660 ANAVEAGRVSGVD 672
A E S VD
Sbjct: 353 PPATETSSGSAVD 365
>UNIPROTKB|C9JFR1 [details] [associations]
symbol:AIRE "Autoimmune regulator" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AP001060 IPI:IPI00031188
HGNC:HGNC:360 ProteinModelPortal:C9JFR1 SMR:C9JFR1 STRING:C9JFR1
Ensembl:ENST00000329347 HOGENOM:HOG000207903 ArrayExpress:C9JFR1
Bgee:C9JFR1 Uniprot:C9JFR1
Length = 244
Score = 161 (61.7 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 27/51 (52%), Positives = 31/51 (60%)
Query: 598 YPGKDNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYC 646
+P N+D C +C DGG L+ CDGCPRAFH C S L IP G W C C
Sbjct: 83 HPSPKNEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSC 133
>UNIPROTKB|F5GWX5 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AC006064
IPI:IPI00000846 HGNC:HGNC:1919 ChiTaRS:CHD4
ProteinModelPortal:F5GWX5 SMR:F5GWX5 PRIDE:F5GWX5
Ensembl:ENST00000544040 UCSC:uc001qpn.3 ArrayExpress:F5GWX5
Bgee:F5GWX5 Uniprot:F5GWX5
Length = 1905
Score = 132 (51.5 bits), Expect = 8.6e-09, Sum P(4) = 8.6e-09
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQ 647
D+ D C +C GG ++ CD CPRA+H C + P+G W C +C+
Sbjct: 361 DHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCE 408
Score = 126 (49.4 bits), Expect = 8.6e-05, Sum P(3) = 8.6e-05
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 605 DLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYC 646
+ C +C DGG LL CD CP ++H C + L IP G+W C C
Sbjct: 443 EFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRC 486
Score = 90 (36.7 bits), Expect = 8.6e-09, Sum P(4) = 8.6e-09
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 698 CRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCSRINS 755
CR C K G G +L CD C +H+ CL L E+P G+W C C C +
Sbjct: 445 CRVC---KDG-GE--LLCCDTCPSSYHIHCLNP----PLPEIPNGEWLCPRCT-CPALKG 493
Query: 756 VLQNLLV 762
+Q +L+
Sbjct: 494 KVQKILI 500
Score = 57 (25.1 bits), Expect = 8.6e-09, Sum P(4) = 8.6e-09
Identities = 23/73 (31%), Positives = 34/73 (46%)
Query: 117 VENVIEET-VKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPV 175
VE+++ T V P+ E PI K + KEG + K + P A KPK + V
Sbjct: 230 VESMVTATEVAPPPPPV--EVPIRKAKT---KEGKGPNARRKPKGSPRVPDAKKPKPKKV 284
Query: 176 EVLVTQSEGFGNE 188
L + GFG++
Sbjct: 285 APLKIKLGGFGSK 297
Score = 57 (25.1 bits), Expect = 8.6e-05, Sum P(3) = 8.6e-05
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 197 AIAEGSALTSPKKNLELKMSKKISLNKKPMTVTELFETGLLDGVSVVYMGG 247
++++GS S + +L+ +KK ++ +T + +ET D V GG
Sbjct: 323 SVSDGSTSRSSRSRKKLRTTKKKKKGEEEVTAVDGYETDHQDYCEVCQQGG 373
Score = 50 (22.7 bits), Expect = 5.4e-08, Sum P(3) = 5.4e-08
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 48 KVNGFIVYSRVKRSRFSNSDDL-LEDDVIDKRINS-KIHEGRINK 90
K+ GF S+ KRS S DDL +E D D INS + +G ++
Sbjct: 290 KLGGF--GSKRKRSS-SEDDDLDVESDFDDASINSYSVSDGSTSR 331
Score = 47 (21.6 bits), Expect = 8.6e-09, Sum P(4) = 8.6e-09
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 455 NSTPVT--SVHKSSQSQRQRKITKKSKK 480
NS V+ S +SS+S+++ + TKK KK
Sbjct: 320 NSYSVSDGSTSRSSRSRKKLRTTKKKKK 347
Score = 39 (18.8 bits), Expect = 4.9e-07, Sum P(4) = 4.9e-07
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 366 SKKPQGTMTYTTGIRIRASGPKLVSRSSENDSM 398
+KKP+ I++ G K SSE+D +
Sbjct: 276 AKKPKPKKVAPLKIKLGGFGSKRKRSSSEDDDL 308
Score = 38 (18.4 bits), Expect = 8.6e-07, Sum P(3) = 8.6e-07
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 498 PNKSRWNITPKDQRLHKLVFDESGLPDGTE 527
P K R PK +R K + D SG +G E
Sbjct: 57 PKKPRDPKIPKSKRQKKELGDSSG--EGPE 84
>UNIPROTKB|E2RHA0 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 EMBL:AAEX03015287 RefSeq:XP_867754.2
Ensembl:ENSCAFT00000023774 GeneID:477714 KEGG:cfa:477714
Uniprot:E2RHA0
Length = 1912
Score = 132 (51.5 bits), Expect = 8.8e-09, Sum P(4) = 8.8e-09
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQ 647
D+ D C +C GG ++ CD CPRA+H C + P+G W C +C+
Sbjct: 368 DHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCE 415
Score = 128 (50.1 bits), Expect = 5.4e-05, Sum P(3) = 5.4e-05
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 599 PGKDND---DLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYC 646
P +++D + C +C DGG LL CD CP ++H C + L IP G+W C C
Sbjct: 441 PEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRC 493
Score = 90 (36.7 bits), Expect = 8.8e-09, Sum P(4) = 8.8e-09
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 698 CRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCSRINS 755
CR C K G G +L CD C +H+ CL L E+P G+W C C C +
Sbjct: 452 CRVC---KDG-GE--LLCCDTCPSSYHIHCLNP----PLPEIPNGEWLCPRCT-CPALKG 500
Query: 756 VLQNLLV 762
+Q +L+
Sbjct: 501 KVQKILI 507
Score = 57 (25.1 bits), Expect = 8.8e-09, Sum P(4) = 8.8e-09
Identities = 23/73 (31%), Positives = 34/73 (46%)
Query: 117 VENVIEET-VKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPV 175
VE+++ T V P+ E PI K + KEG + K + P A KPK + V
Sbjct: 237 VESMVTATEVAPPPPPV--EVPIRKAKT---KEGKGPNARRKPKGSPRVPDAKKPKPKKV 291
Query: 176 EVLVTQSEGFGNE 188
L + GFG++
Sbjct: 292 APLKIKLGGFGSK 304
Score = 57 (25.1 bits), Expect = 5.4e-05, Sum P(3) = 5.4e-05
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 197 AIAEGSALTSPKKNLELKMSKKISLNKKPMTVTELFETGLLDGVSVVYMGG 247
++++GS S + +L+ +KK ++ +T + +ET D V GG
Sbjct: 330 SVSDGSTSRSSRSRKKLRTTKKKKKGEEEVTAVDGYETDHQDYCEVCQQGG 380
Score = 50 (22.7 bits), Expect = 5.5e-08, Sum P(3) = 5.5e-08
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 48 KVNGFIVYSRVKRSRFSNSDDL-LEDDVIDKRINS-KIHEGRINK 90
K+ GF S+ KRS S DDL +E D D INS + +G ++
Sbjct: 297 KLGGF--GSKRKRSS-SEDDDLDVESDFDDASINSYSVSDGSTSR 338
Score = 47 (21.6 bits), Expect = 8.8e-09, Sum P(4) = 8.8e-09
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 455 NSTPVT--SVHKSSQSQRQRKITKKSKK 480
NS V+ S +SS+S+++ + TKK KK
Sbjct: 327 NSYSVSDGSTSRSSRSRKKLRTTKKKKK 354
Score = 39 (18.8 bits), Expect = 5.0e-07, Sum P(4) = 5.0e-07
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 366 SKKPQGTMTYTTGIRIRASGPKLVSRSSENDSM 398
+KKP+ I++ G K SSE+D +
Sbjct: 283 AKKPKPKKVAPLKIKLGGFGSKRKRSSSEDDDL 315
>UNIPROTKB|F1SLR5 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 OMA:ERMLLCR EMBL:CU914489 EMBL:GACC01000070
RefSeq:XP_003126577.3 UniGene:Ssc.25044 Ensembl:ENSSSCT00000000759
GeneID:100515610 KEGG:ssc:100515610 Uniprot:F1SLR5
Length = 1912
Score = 132 (51.5 bits), Expect = 8.8e-09, Sum P(4) = 8.8e-09
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQ 647
D+ D C +C GG ++ CD CPRA+H C + P+G W C +C+
Sbjct: 368 DHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCE 415
Score = 128 (50.1 bits), Expect = 5.4e-05, Sum P(3) = 5.4e-05
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 599 PGKDND---DLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYC 646
P +++D + C +C DGG LL CD CP ++H C + L IP G+W C C
Sbjct: 441 PEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRC 493
Score = 90 (36.7 bits), Expect = 8.8e-09, Sum P(4) = 8.8e-09
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 698 CRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCSRINS 755
CR C K G G +L CD C +H+ CL L E+P G+W C C C +
Sbjct: 452 CRVC---KDG-GE--LLCCDTCPSSYHIHCLNP----PLPEIPNGEWLCPRCT-CPALKG 500
Query: 756 VLQNLLV 762
+Q +L+
Sbjct: 501 KVQKILI 507
Score = 57 (25.1 bits), Expect = 8.8e-09, Sum P(4) = 8.8e-09
Identities = 23/73 (31%), Positives = 34/73 (46%)
Query: 117 VENVIEET-VKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPV 175
VE+++ T V P+ E PI K + KEG + K + P A KPK + V
Sbjct: 237 VESMVTATEVAPPPPPV--EVPIRKAKT---KEGKGPNARRKPKGSPRVPDAKKPKPKKV 291
Query: 176 EVLVTQSEGFGNE 188
L + GFG++
Sbjct: 292 APLKIKLGGFGSK 304
Score = 57 (25.1 bits), Expect = 5.4e-05, Sum P(3) = 5.4e-05
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 197 AIAEGSALTSPKKNLELKMSKKISLNKKPMTVTELFETGLLDGVSVVYMGG 247
++++GS S + +L+ +KK ++ +T + +ET D V GG
Sbjct: 330 SVSDGSTSRSSRSRKKLRTTKKKKKGEEEVTAVDGYETDHQDYCEVCQQGG 380
Score = 50 (22.7 bits), Expect = 5.5e-08, Sum P(3) = 5.5e-08
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 48 KVNGFIVYSRVKRSRFSNSDDL-LEDDVIDKRINS-KIHEGRINK 90
K+ GF S+ KRS S DDL +E D D INS + +G ++
Sbjct: 297 KLGGF--GSKRKRSS-SEDDDLDVESDFDDASINSYSVSDGSTSR 338
Score = 47 (21.6 bits), Expect = 8.8e-09, Sum P(4) = 8.8e-09
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 455 NSTPVT--SVHKSSQSQRQRKITKKSKK 480
NS V+ S +SS+S+++ + TKK KK
Sbjct: 327 NSYSVSDGSTSRSSRSRKKLRTTKKKKK 354
Score = 39 (18.8 bits), Expect = 5.0e-07, Sum P(4) = 5.0e-07
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 366 SKKPQGTMTYTTGIRIRASGPKLVSRSSENDSM 398
+KKP+ I++ G K SSE+D +
Sbjct: 283 AKKPKPKKVAPLKIKLGGFGSKRKRSSSEDDDL 315
>UNIPROTKB|Q14839 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 EMBL:X86691
EMBL:AC006064 EMBL:BC038596 IPI:IPI00000846 IPI:IPI00455210
RefSeq:NP_001264.2 UniGene:Hs.162233 PDB:1MM2 PDB:1MM3 PDB:2EE1
PDB:2L5U PDB:2L75 PDBsum:1MM2 PDBsum:1MM3 PDBsum:2EE1 PDBsum:2L5U
PDBsum:2L75 ProteinModelPortal:Q14839 SMR:Q14839 DIP:DIP-31183N
IntAct:Q14839 MINT:MINT-349766 STRING:Q14839 PhosphoSite:Q14839
DMDM:311033360 PaxDb:Q14839 PRIDE:Q14839 DNASU:1108
Ensembl:ENST00000309577 Ensembl:ENST00000357008
Ensembl:ENST00000544484 GeneID:1108 KEGG:hsa:1108 UCSC:uc001qpo.3
UCSC:uc001qpp.3 CTD:1108 GeneCards:GC12M006679 H-InvDB:HIX0201859
HGNC:HGNC:1919 HPA:HPA012008 MIM:603277 neXtProt:NX_Q14839
PharmGKB:PA26455 KO:K11643 OMA:ERMLLCR OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EvolutionaryTrace:Q14839 GenomeRNAi:1108 NextBio:4598
PMAP-CutDB:Q14839 ArrayExpress:Q14839 Bgee:Q14839 CleanEx:HS_CHD4
Genevestigator:Q14839 GermOnline:ENSG00000111642 Uniprot:Q14839
Length = 1912
Score = 132 (51.5 bits), Expect = 8.8e-09, Sum P(4) = 8.8e-09
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQ 647
D+ D C +C GG ++ CD CPRA+H C + P+G W C +C+
Sbjct: 368 DHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCE 415
Score = 126 (49.4 bits), Expect = 8.7e-05, Sum P(3) = 8.7e-05
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 605 DLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYC 646
+ C +C DGG LL CD CP ++H C + L IP G+W C C
Sbjct: 450 EFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRC 493
Score = 90 (36.7 bits), Expect = 8.8e-09, Sum P(4) = 8.8e-09
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 698 CRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCSRINS 755
CR C K G G +L CD C +H+ CL L E+P G+W C C C +
Sbjct: 452 CRVC---KDG-GE--LLCCDTCPSSYHIHCLNP----PLPEIPNGEWLCPRCT-CPALKG 500
Query: 756 VLQNLLV 762
+Q +L+
Sbjct: 501 KVQKILI 507
Score = 57 (25.1 bits), Expect = 8.8e-09, Sum P(4) = 8.8e-09
Identities = 23/73 (31%), Positives = 34/73 (46%)
Query: 117 VENVIEET-VKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPV 175
VE+++ T V P+ E PI K + KEG + K + P A KPK + V
Sbjct: 237 VESMVTATEVAPPPPPV--EVPIRKAKT---KEGKGPNARRKPKGSPRVPDAKKPKPKKV 291
Query: 176 EVLVTQSEGFGNE 188
L + GFG++
Sbjct: 292 APLKIKLGGFGSK 304
Score = 57 (25.1 bits), Expect = 8.7e-05, Sum P(3) = 8.7e-05
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 197 AIAEGSALTSPKKNLELKMSKKISLNKKPMTVTELFETGLLDGVSVVYMGG 247
++++GS S + +L+ +KK ++ +T + +ET D V GG
Sbjct: 330 SVSDGSTSRSSRSRKKLRTTKKKKKGEEEVTAVDGYETDHQDYCEVCQQGG 380
Score = 50 (22.7 bits), Expect = 5.5e-08, Sum P(3) = 5.5e-08
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 48 KVNGFIVYSRVKRSRFSNSDDL-LEDDVIDKRINS-KIHEGRINK 90
K+ GF S+ KRS S DDL +E D D INS + +G ++
Sbjct: 297 KLGGF--GSKRKRSS-SEDDDLDVESDFDDASINSYSVSDGSTSR 338
Score = 47 (21.6 bits), Expect = 8.8e-09, Sum P(4) = 8.8e-09
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 455 NSTPVT--SVHKSSQSQRQRKITKKSKK 480
NS V+ S +SS+S+++ + TKK KK
Sbjct: 327 NSYSVSDGSTSRSSRSRKKLRTTKKKKK 354
Score = 39 (18.8 bits), Expect = 5.0e-07, Sum P(4) = 5.0e-07
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 366 SKKPQGTMTYTTGIRIRASGPKLVSRSSENDSM 398
+KKP+ I++ G K SSE+D +
Sbjct: 283 AKKPKPKKVAPLKIKLGGFGSKRKRSSSEDDDL 315
>UNIPROTKB|J9NW81 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:AAEX03015287 Ensembl:ENSCAFT00000048002
Uniprot:J9NW81
Length = 1932
Score = 132 (51.5 bits), Expect = 9.1e-09, Sum P(4) = 9.1e-09
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQ 647
D+ D C +C GG ++ CD CPRA+H C + P+G W C +C+
Sbjct: 388 DHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCE 435
Score = 128 (50.1 bits), Expect = 5.6e-05, Sum P(3) = 5.6e-05
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 599 PGKDND---DLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYC 646
P +++D + C +C DGG LL CD CP ++H C + L IP G+W C C
Sbjct: 461 PEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRC 513
Score = 90 (36.7 bits), Expect = 9.1e-09, Sum P(4) = 9.1e-09
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 698 CRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCSRINS 755
CR C K G G +L CD C +H+ CL L E+P G+W C C C +
Sbjct: 472 CRVC---KDG-GE--LLCCDTCPSSYHIHCLNP----PLPEIPNGEWLCPRCT-CPALKG 520
Query: 756 VLQNLLV 762
+Q +L+
Sbjct: 521 KVQKILI 527
Score = 57 (25.1 bits), Expect = 9.1e-09, Sum P(4) = 9.1e-09
Identities = 23/73 (31%), Positives = 34/73 (46%)
Query: 117 VENVIEET-VKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPV 175
VE+++ T V P+ E PI K + KEG + K + P A KPK + V
Sbjct: 257 VESMVTATEVAPPPPPV--EVPIRKAKT---KEGKGPNARRKPKGSPRVPDAKKPKPKKV 311
Query: 176 EVLVTQSEGFGNE 188
L + GFG++
Sbjct: 312 APLKIKLGGFGSK 324
Score = 57 (25.1 bits), Expect = 5.6e-05, Sum P(3) = 5.6e-05
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 197 AIAEGSALTSPKKNLELKMSKKISLNKKPMTVTELFETGLLDGVSVVYMGG 247
++++GS S + +L+ +KK ++ +T + +ET D V GG
Sbjct: 350 SVSDGSTSRSSRSRKKLRTTKKKKKGEEEVTAVDGYETDHQDYCEVCQQGG 400
Score = 50 (22.7 bits), Expect = 5.7e-08, Sum P(3) = 5.7e-08
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 48 KVNGFIVYSRVKRSRFSNSDDL-LEDDVIDKRINS-KIHEGRINK 90
K+ GF S+ KRS S DDL +E D D INS + +G ++
Sbjct: 317 KLGGF--GSKRKRSS-SEDDDLDVESDFDDASINSYSVSDGSTSR 358
Score = 47 (21.6 bits), Expect = 9.1e-09, Sum P(4) = 9.1e-09
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 455 NSTPVT--SVHKSSQSQRQRKITKKSKK 480
NS V+ S +SS+S+++ + TKK KK
Sbjct: 347 NSYSVSDGSTSRSSRSRKKLRTTKKKKK 374
Score = 39 (18.8 bits), Expect = 5.2e-07, Sum P(4) = 5.2e-07
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 366 SKKPQGTMTYTTGIRIRASGPKLVSRSSENDSM 398
+KKP+ I++ G K SSE+D +
Sbjct: 303 AKKPKPKKVAPLKIKLGGFGSKRKRSSSEDDDL 335
>MGI|MGI:1344380 [details] [associations]
symbol:Chd4 "chromodomain helicase DNA binding protein 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=ISO] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 MGI:MGI:1344380 Pfam:PF00385
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
GeneTree:ENSGT00560000076896 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
HOVERGEN:HBG005326 CTD:1108 KO:K11643 OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EMBL:BC058578 IPI:IPI00396802 RefSeq:NP_666091.1
UniGene:Mm.333388 ProteinModelPortal:Q6PDQ2 SMR:Q6PDQ2
DIP:DIP-59651N IntAct:Q6PDQ2 STRING:Q6PDQ2 PhosphoSite:Q6PDQ2
PaxDb:Q6PDQ2 PRIDE:Q6PDQ2 Ensembl:ENSMUST00000056889 GeneID:107932
KEGG:mmu:107932 UCSC:uc009dtk.1 NextBio:359735 PMAP-CutDB:Q6PDQ2
Bgee:Q6PDQ2 CleanEx:MM_CHD4 Genevestigator:Q6PDQ2
GermOnline:ENSMUSG00000063870 Uniprot:Q6PDQ2
Length = 1915
Score = 132 (51.5 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQ 647
D+ D C +C GG ++ CD CPRA+H C + P+G W C +C+
Sbjct: 361 DHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCE 408
Score = 128 (50.1 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 599 PGKDND---DLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYC 646
P +++D + C +C DGG LL CD CP ++H C + L IP G+W C C
Sbjct: 434 PEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRC 486
Score = 90 (36.7 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 698 CRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCSRINS 755
CR C K G G +L CD C +H+ CL L E+P G+W C C C +
Sbjct: 445 CRVC---KDG-GE--LLCCDTCPSSYHIHCLNP----PLPEIPNGEWLCPRCT-CPALKG 493
Query: 756 VLQNLLV 762
+Q +L+
Sbjct: 494 KVQKILI 500
Score = 57 (25.1 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 23/73 (31%), Positives = 34/73 (46%)
Query: 117 VENVIEET-VKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPV 175
VE+++ T V P+ E PI K + KEG + K + P A KPK + V
Sbjct: 230 VESMVTATEVAPPPPPV--EVPIRKAKT---KEGKGPNARRKPKGSPRVPDAKKPKPKKV 284
Query: 176 EVLVTQSEGFGNE 188
L + GFG++
Sbjct: 285 APLKIKLGGFGSK 297
Score = 57 (25.1 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 197 AIAEGSALTSPKKNLELKMSKKISLNKKPMTVTELFETGLLDGVSVVYMGG 247
++++GS S + +L+ +KK ++ +T + +ET D V GG
Sbjct: 323 SVSDGSTSRSSRSRKKLRTAKKKKKGEEEVTAVDGYETDHQDYCEVCQQGG 373
Score = 50 (22.7 bits), Expect = 5.5e-08, Sum P(3) = 5.5e-08
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 48 KVNGFIVYSRVKRSRFSNSDDL-LEDDVIDKRINS-KIHEGRINK 90
K+ GF S+ KRS S DDL +E D D INS + +G ++
Sbjct: 290 KLGGF--GSKRKRSS-SEDDDLDVESDFDDASINSYSVSDGSTSR 331
Score = 39 (18.8 bits), Expect = 6.9e-07, Sum P(3) = 6.9e-07
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 366 SKKPQGTMTYTTGIRIRASGPKLVSRSSENDSM 398
+KKP+ I++ G K SSE+D +
Sbjct: 276 AKKPKPKKVAPLKIKLGGFGSKRKRSSSEDDDL 308
Score = 38 (18.4 bits), Expect = 8.7e-07, Sum P(3) = 8.7e-07
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 498 PNKSRWNITPKDQRLHKLVFDESGLPDGTE 527
P K R PK +R K + D SG +G E
Sbjct: 57 PKKPRDPKIPKSKRQKKELGDSSG--EGPE 84
>UNIPROTKB|E9PU01 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI01016558 PRIDE:E9PU01 Ensembl:ENSRNOT00000055970
ArrayExpress:E9PU01 Uniprot:E9PU01
Length = 1915
Score = 132 (51.5 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQ 647
D+ D C +C GG ++ CD CPRA+H C + P+G W C +C+
Sbjct: 361 DHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCE 408
Score = 128 (50.1 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 599 PGKDND---DLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYC 646
P +++D + C +C DGG LL CD CP ++H C + L IP G+W C C
Sbjct: 434 PEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRC 486
Score = 90 (36.7 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 698 CRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCSRINS 755
CR C K G G +L CD C +H+ CL L E+P G+W C C C +
Sbjct: 445 CRVC---KDG-GE--LLCCDTCPSSYHIHCLNP----PLPEIPNGEWLCPRCT-CPALKG 493
Query: 756 VLQNLLV 762
+Q +L+
Sbjct: 494 KVQKILI 500
Score = 57 (25.1 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 23/73 (31%), Positives = 34/73 (46%)
Query: 117 VENVIEET-VKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPV 175
VE+++ T V P+ E PI K + KEG + K + P A KPK + V
Sbjct: 230 VESMVTATEVAPPPPPV--EVPIRKAKT---KEGKGPNARRKPKGSPRVPDAKKPKPKKV 284
Query: 176 EVLVTQSEGFGNE 188
L + GFG++
Sbjct: 285 APLKIKLGGFGSK 297
Score = 57 (25.1 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 197 AIAEGSALTSPKKNLELKMSKKISLNKKPMTVTELFETGLLDGVSVVYMGG 247
++++GS S + +L+ +KK ++ +T + +ET D V GG
Sbjct: 323 SVSDGSTSRSSRSRKKLRTAKKKKKGEEEVTAVDGYETDHQDYCEVCQQGG 373
Score = 50 (22.7 bits), Expect = 5.5e-08, Sum P(3) = 5.5e-08
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 48 KVNGFIVYSRVKRSRFSNSDDL-LEDDVIDKRINS-KIHEGRINK 90
K+ GF S+ KRS S DDL +E D D INS + +G ++
Sbjct: 290 KLGGF--GSKRKRSS-SEDDDLDVESDFDDASINSYSVSDGSTSR 331
Score = 39 (18.8 bits), Expect = 6.9e-07, Sum P(3) = 6.9e-07
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 366 SKKPQGTMTYTTGIRIRASGPKLVSRSSENDSM 398
+KKP+ I++ G K SSE+D +
Sbjct: 276 AKKPKPKKVAPLKIKLGGFGSKRKRSSSEDDDL 308
Score = 38 (18.4 bits), Expect = 8.7e-07, Sum P(3) = 8.7e-07
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 498 PNKSRWNITPKDQRLHKLVFDESGLPDGTE 527
P K R PK +R K + D SG +G E
Sbjct: 57 PKKPRDPKIPKSKRQKKELGDSSG--EGPE 84
>UNIPROTKB|F1N3F6 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:DAAA02014463 IPI:IPI00877578
Ensembl:ENSBTAT00000019612 ArrayExpress:F1N3F6 Uniprot:F1N3F6
Length = 1934
Score = 132 (51.5 bits), Expect = 1.1e-08, Sum P(4) = 1.1e-08
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQ 647
D+ D C +C GG ++ CD CPRA+H C + P+G W C +C+
Sbjct: 390 DHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCE 437
Score = 128 (50.1 bits), Expect = 7.1e-05, Sum P(3) = 7.1e-05
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 599 PGKDND---DLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYC 646
P +++D + C +C DGG LL CD CP ++H C + L IP G+W C C
Sbjct: 463 PEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRC 515
Score = 90 (36.7 bits), Expect = 1.1e-08, Sum P(4) = 1.1e-08
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 698 CRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCSRINS 755
CR C K G G +L CD C +H+ CL L E+P G+W C C C +
Sbjct: 474 CRVC---KDG-GE--LLCCDTCPSSYHIHCLNP----PLPEIPNGEWLCPRCT-CPALKG 522
Query: 756 VLQNLLV 762
+Q +L+
Sbjct: 523 KVQKILI 529
Score = 57 (25.1 bits), Expect = 7.1e-05, Sum P(3) = 7.1e-05
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 197 AIAEGSALTSPKKNLELKMSKKISLNKKPMTVTELFETGLLDGVSVVYMGG 247
++++GS S + +L+ +KK ++ +T + +ET D V GG
Sbjct: 352 SVSDGSTSRSSRSRKKLRTTKKKKKGEEEVTAVDGYETDHQDYCEVCQQGG 402
Score = 56 (24.8 bits), Expect = 1.1e-08, Sum P(4) = 1.1e-08
Identities = 26/75 (34%), Positives = 35/75 (46%)
Query: 117 VENVIEET-VKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNK-KCLKR-PSAMKPKVE 173
VE+++ T V P+ E PI K + KEG N K K R P A KPK +
Sbjct: 257 VESMVTATEVAPPPPPV--EVPIRKAKT---KEGKDLGPNARRKPKGSPRVPDAKKPKPK 311
Query: 174 PVEVLVTQSEGFGNE 188
V L + GFG++
Sbjct: 312 KVAPLKIKLGGFGSK 326
Score = 50 (22.7 bits), Expect = 5.7e-08, Sum P(3) = 5.7e-08
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 48 KVNGFIVYSRVKRSRFSNSDDL-LEDDVIDKRINS-KIHEGRINK 90
K+ GF S+ KRS S DDL +E D D INS + +G ++
Sbjct: 319 KLGGF--GSKRKRSS-SEDDDLDVESDFDDASINSYSVSDGSTSR 360
Score = 47 (21.6 bits), Expect = 1.1e-08, Sum P(4) = 1.1e-08
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 455 NSTPVT--SVHKSSQSQRQRKITKKSKK 480
NS V+ S +SS+S+++ + TKK KK
Sbjct: 349 NSYSVSDGSTSRSSRSRKKLRTTKKKKK 376
Score = 39 (18.8 bits), Expect = 5.2e-07, Sum P(4) = 5.2e-07
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 366 SKKPQGTMTYTTGIRIRASGPKLVSRSSENDSM 398
+KKP+ I++ G K SSE+D +
Sbjct: 305 AKKPKPKKVAPLKIKLGGFGSKRKRSSSEDDDL 337
>UNIPROTKB|F1LM59 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00365698 PRIDE:F1LM59 Ensembl:ENSRNOT00000024864
ArrayExpress:F1LM59 Uniprot:F1LM59
Length = 1945
Score = 132 (51.5 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQ 647
D+ D C +C GG ++ CD CPRA+H C + P+G W C +C+
Sbjct: 389 DHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCE 436
Score = 128 (50.1 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 599 PGKDND---DLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYC 646
P +++D + C +C DGG LL CD CP ++H C + L IP G+W C C
Sbjct: 462 PEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRC 514
Score = 90 (36.7 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 698 CRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCSRINS 755
CR C K G G +L CD C +H+ CL L E+P G+W C C C +
Sbjct: 473 CRVC---KDG-GE--LLCCDTCPSSYHIHCLNP----PLPEIPNGEWLCPRCT-CPALKG 521
Query: 756 VLQNLLV 762
+Q +L+
Sbjct: 522 KVQKILI 528
Score = 57 (25.1 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 23/73 (31%), Positives = 34/73 (46%)
Query: 117 VENVIEET-VKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPV 175
VE+++ T V P+ E PI K + KEG + K + P A KPK + V
Sbjct: 258 VESMVTATEVAPPPPPV--EVPIRKAKT---KEGKGPNARRKPKGSPRVPDAKKPKPKKV 312
Query: 176 EVLVTQSEGFGNE 188
L + GFG++
Sbjct: 313 APLKIKLGGFGSK 325
Score = 57 (25.1 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 197 AIAEGSALTSPKKNLELKMSKKISLNKKPMTVTELFETGLLDGVSVVYMGG 247
++++GS S + +L+ +KK ++ +T + +ET D V GG
Sbjct: 351 SVSDGSTSRSSRSRKKLRTAKKKKKGEEEVTAVDGYETDHQDYCEVCQQGG 401
Score = 50 (22.7 bits), Expect = 5.8e-08, Sum P(3) = 5.8e-08
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 48 KVNGFIVYSRVKRSRFSNSDDL-LEDDVIDKRINS-KIHEGRINK 90
K+ GF S+ KRS S DDL +E D D INS + +G ++
Sbjct: 318 KLGGF--GSKRKRSS-SEDDDLDVESDFDDASINSYSVSDGSTSR 359
Score = 39 (18.8 bits), Expect = 7.3e-07, Sum P(3) = 7.3e-07
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 366 SKKPQGTMTYTTGIRIRASGPKLVSRSSENDSM 398
+KKP+ I++ G K SSE+D +
Sbjct: 304 AKKPKPKKVAPLKIKLGGFGSKRKRSSSEDDDL 336
>UNIPROTKB|F1NRM1 [details] [associations]
symbol:F1NRM1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0045182 "translation regulator
activity" evidence=IEA] InterPro:IPR001965 InterPro:IPR004865
InterPro:IPR008087 InterPro:IPR019787 Pfam:PF00628 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS51414 SMART:SM00249
GO:GO:0005634 GO:GO:0005737 GO:GO:0006417 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045182 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0006959
GeneTree:ENSGT00440000034278 EMBL:AADN02024441 EMBL:AADN02024442
IPI:IPI01017196 Ensembl:ENSGALT00000041318 ArrayExpress:F1NRM1
Uniprot:F1NRM1
Length = 537
Score = 174 (66.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 40/118 (33%), Positives = 60/118 (50%)
Query: 554 SEVSPSQFEAHAGWSSRRKPYAHIY-TSNGVSLHQLAISLSKGRQYPGKDNDDLCTICAD 612
+ +S ++E GW R P A ++ ++G L+ +P +DN+D C +C D
Sbjct: 384 TSLSTGRWEV-TGWEVPRSPAAWLHPAADGEPLYP----------HPRQDNEDECAVCGD 432
Query: 613 GGNLLPCDGCPRAFHKECA--SLSSIPQGDWYCKYCQNMFERKRFLQHDANAVEAGRV 668
GG L+ CDGCPRAFH C L +P+G W C C + E H+++A RV
Sbjct: 433 GGELICCDGCPRAFHLPCLVPPLPRVPRGLWLCSSCTGIPETG---SHESSAAAGERV 487
Score = 126 (49.4 bits), Expect = 8.7e-07, Sum P(3) = 8.7e-07
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 601 KDNDDLCTICADGGNLLPCDGCPRAFHKEC 630
+DN+D C +C DGG L+ CDGCPRAFH C
Sbjct: 289 QDNEDECAVCGDGGELICCDGCPRAFHLPC 318
Score = 76 (31.8 bits), Expect = 8.7e-07, Sum P(3) = 8.7e-07
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 713 ILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRI 753
++ CD C R FH+ CL + L +P+G W C C+ I
Sbjct: 436 LICCDGCPRAFHLPCL----VPPLPRVPRGLWLCS-SCTGI 471
Score = 39 (18.8 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 16 TSTQSLPQAGIQASDCVKAACENVRC 41
TS +LP A +Q + V A+ V C
Sbjct: 176 TSATNLPAASVQRAVMVAASEVPVTC 201
>UNIPROTKB|Q5TH12 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 GO:GO:0046872 GO:GO:0008270
GO:GO:0016301 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AL049540
EMBL:AL031666 UniGene:Hs.446240 UniGene:Hs.658553 UniGene:Hs.668465
HGNC:HGNC:9397 EMBL:AL390212 IPI:IPI00872983 SMR:Q5TH12
STRING:Q5TH12 Ensembl:ENST00000435836 HOVERGEN:HBG105145
Uniprot:Q5TH12
Length = 175
Score = 141 (54.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 31/92 (33%), Positives = 50/92 (54%)
Query: 568 SSRRKPYAHIYTSNGVSLHQLAISLSKGRQYPG------KD----NDDLCTICADGGNLL 617
+ +RK + ++SNG S + S K ++ PG K+ ND C +C G +L
Sbjct: 17 AQKRKFPSPPHSSNGHSPQDTSTSPIKKKKKPGLLNSNNKEQDGRNDFYCWVCHREGQVL 76
Query: 618 PCDGCPRAFHKECASLSSIPQGDWYCKYCQNM 649
C+ CPR +H +C L+S P+GDW+C C+ +
Sbjct: 77 CCELCPRVYHAKCLRLTSEPEGDWFCPECEKI 108
>UNIPROTKB|H0YF52 [details] [associations]
symbol:TRIM66 "Tripartite motif-containing protein 66"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AC091053
EMBL:AC104360 HGNC:HGNC:29005 Ensembl:ENST00000530502
Uniprot:H0YF52
Length = 286
Score = 157 (60.3 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 37/102 (36%), Positives = 59/102 (57%)
Query: 594 KGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKEC--ASLSSIPQGDWYCKYCQNMFE 651
KG P +N+D C +C +GG LL CD CP+ FH C +L S P G+W C C+++ +
Sbjct: 93 KGPPAP-IENEDFCAVCLNGGELLCCDRCPKVFHLSCHVPALLSFPGGEWVCTLCRSLTQ 151
Query: 652 RKRFLQHDA-NAV--EAG-RVS-GVDSVEQITKRCIRIVKNL 688
+ +++D NA + G R S G+ +Q K+C ++V +L
Sbjct: 152 PE--MEYDCENACYNQPGMRASPGLSMYDQ--KKCEKLVLSL 189
>UNIPROTKB|F1NMG7 [details] [associations]
symbol:F1NMG7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR008087 InterPro:IPR019787
Pfam:PF00628 Pfam:PF03172 PRINTS:PR01711 PROSITE:PS50016
PROSITE:PS51414 SMART:SM00249 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0046872 GO:GO:0015629
GO:GO:0008270 GO:GO:0045944 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:NDDECAV GO:GO:0006959
GeneTree:ENSGT00440000034278 EMBL:AADN02024441 EMBL:AADN02024442
IPI:IPI00575755 Ensembl:ENSGALT00000002020 ArrayExpress:F1NMG7
Uniprot:F1NMG7
Length = 584
Score = 163 (62.4 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 26/51 (50%), Positives = 32/51 (62%)
Query: 598 YPGKDNDDLCTICADGGNLLPCDGCPRAFHKECA--SLSSIPQGDWYCKYC 646
+P +DN+D C +C DGG L+ CDGCPRAFH C L +P G W C C
Sbjct: 450 HPRQDNEDECAVCGDGGELICCDGCPRAFHLPCLVPPLPRVPSGTWQCSSC 500
Score = 126 (49.4 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 601 KDNDDLCTICADGGNLLPCDGCPRAFHKEC 630
+DN+D C +C DGG L+ CDGCPRAFH C
Sbjct: 298 QDNEDECAVCGDGGELICCDGCPRAFHLPC 327
Score = 70 (29.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 713 ILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC 746
++ CD C R FH+ CL + L +P G W C
Sbjct: 468 LICCDGCPRAFHLPCL----VPPLPRVPSGTWQC 497
>UNIPROTKB|F1NH79 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02061139 EMBL:AADN02061140 EMBL:AADN02061141
EMBL:AADN02061142 EMBL:AADN02061143 IPI:IPI00598956
Ensembl:ENSGALT00000023339 OMA:DGEHEHQ Uniprot:F1NH79
Length = 1895
Score = 132 (51.5 bits), Expect = 5.3e-08, Sum P(3) = 5.3e-08
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQ 647
D+ D C +C GG ++ CD CPRA+H C + P+G W C +C+
Sbjct: 338 DHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCE 385
Score = 90 (36.7 bits), Expect = 5.3e-08, Sum P(3) = 5.3e-08
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 698 CRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCSRINS 755
CR C K G G +L CD C +H+ CL L E+P G+W C C C +
Sbjct: 422 CRVC---KDG-GE--LLCCDACPSSYHIHCLNP----PLPEIPNGEWLCPRCT-CPALKG 470
Query: 756 VLQNLLV 762
+Q +L+
Sbjct: 471 KVQKILI 477
Score = 50 (22.7 bits), Expect = 5.3e-08, Sum P(3) = 5.3e-08
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 48 KVNGFIVYSRVKRSRFSNSDDL-LEDDVIDKRINS-KIHEGRINK 90
K+ GF S+ KRS S DDL +E D D INS + +G ++
Sbjct: 266 KLGGF--GSKRKRSS-SEDDDLDVESDFDDASINSYSVSDGSTSR 307
Score = 46 (21.3 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 18/70 (25%), Positives = 29/70 (41%)
Query: 120 VIEETVKGKKAPICKEEPIS-KVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPVEVL 178
V+E V A + + P+ + KEG + K + P KPK + V L
Sbjct: 205 VVESMVTNVDA-VLPQPPVDVPLRKAKTKEGKGPNARRKPKGSPRIPDMKKPKTKKVAPL 263
Query: 179 VTQSEGFGNE 188
+ GFG++
Sbjct: 264 KIKLGGFGSK 273
Score = 38 (18.4 bits), Expect = 8.4e-07, Sum P(3) = 8.4e-07
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 367 KKPQGTMTYTTGIRIRASGPKLVSRSSENDSM 398
KKP+ I++ G K SSE+D +
Sbjct: 253 KKPKTKKVAPLKIKLGGFGSKRKRSSSEDDDL 284
>UNIPROTKB|C9JL37 [details] [associations]
symbol:AIRE "Autoimmune regulator" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AP001060 HGNC:HGNC:360
HOGENOM:HOG000060093 IPI:IPI00480202 ProteinModelPortal:C9JL37
SMR:C9JL37 STRING:C9JL37 Ensembl:ENST00000355347
ArrayExpress:C9JL37 Bgee:C9JL37 Uniprot:C9JL37
Length = 338
Score = 161 (61.7 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 27/51 (52%), Positives = 31/51 (60%)
Query: 598 YPGKDNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYC 646
+P N+D C +C DGG L+ CDGCPRAFH C S L IP G W C C
Sbjct: 83 HPSPKNEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSC 133
Score = 38 (18.4 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 13/39 (33%), Positives = 14/39 (35%)
Query: 713 ILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCS 751
+L C C FH C H A P G C CS
Sbjct: 236 VLRCTHCAAAFHWRC---HFPAGTSR-P-GTGLRCRSCS 269
>UNIPROTKB|F1SNJ6 [details] [associations]
symbol:LOC100620590 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0002039 "p53
binding" evidence=IEA] [GO:0071391 "cellular response to estrogen
stimulus" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] [GO:0070562 "regulation of vitamin D receptor
signaling pathway" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0034056 "estrogen response element binding" evidence=IEA]
[GO:0031647 "regulation of protein stability" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005726 "perichromatin
fibrils" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0005737 GO:GO:0045892 GO:GO:0045893 GO:GO:0008285
GO:GO:0042981 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0046777 GO:GO:0003682 GO:GO:0004672 GO:GO:0031647
GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 GO:GO:0055074
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0071391 GO:GO:0034056 GO:GO:0070562
GO:GO:0005726 EMBL:FP236752 Ensembl:ENSSSCT00000017986
Uniprot:F1SNJ6
Length = 301
Score = 154 (59.3 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 30/90 (33%), Positives = 52/90 (57%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKEC--ASLSSIPQGDWYCKYCQNMFERKRFLQHDA 660
N+D C +C +GG LL C+ CP+ FH C +L++ P G+W C +C+++ K +++D
Sbjct: 76 NEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLANFPSGEWICTFCRDL--SKPEVEYDC 133
Query: 661 NAV----EAGRVSGVDSVEQITKR-CIRIV 685
+A E + G+ + I KR C R++
Sbjct: 134 DAPSHNSEKKKTEGLVKLTPIDKRKCERLL 163
>UNIPROTKB|I3LQA6 [details] [associations]
symbol:AIRE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006959 "humoral
immune response" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0045182 "translation regulator activity"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00184 SMART:SM00249 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0046872 GO:GO:0015629
GO:GO:0008270 GO:GO:0045944 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:NDDECAV GO:GO:0006959 Gene3D:3.10.390.10
InterPro:IPR010919 SUPFAM:SSF63763 GeneTree:ENSGT00440000034278
EMBL:FP312783 Ensembl:ENSSSCT00000030488 Uniprot:I3LQA6
Length = 564
Score = 159 (61.0 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 27/50 (54%), Positives = 31/50 (62%)
Query: 599 PGKDNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYC 646
P + N+D C +C DGG L+ CDGCPRAFH C S L IP G W C C
Sbjct: 299 PHQKNEDECAVCRDGGELICCDGCPRAFHLACLSPPLRDIPSGTWRCSSC 348
>UNIPROTKB|F1NBP6 [details] [associations]
symbol:F1NBP6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0010369 "chromocenter"
evidence=IEA] [GO:0016235 "aggresome" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
Prosite:PS00518 GO:GO:0005634 GO:GO:0045892 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016235 InterPro:IPR017907 Gene3D:1.20.920.10
SUPFAM:SSF47370 GO:GO:0010369 GeneTree:ENSGT00530000062982
OMA:HMENERA EMBL:AADN02030565 IPI:IPI00595769
Ensembl:ENSGALT00000009581 Uniprot:F1NBP6
Length = 1025
Score = 157 (60.3 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 33/93 (35%), Positives = 53/93 (56%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKEC--ASLSSIPQGDWYCKYCQNMFERKRFLQHD 659
+N+D C +C +GG LL CD CP+ FH C +L S P G+W C C+N + + +++D
Sbjct: 781 ENEDFCAVCLNGGELLCCDHCPKVFHLSCHVPALLSFPVGEWVCTLCRNPMKPE--VEYD 838
Query: 660 A-NAVEAGRVS---GVDSVEQITKRCIRIVKNL 688
N A + G+D +Q K+C ++V +L
Sbjct: 839 CENTRYAHSYNAQYGLDDYDQ--KKCEKLVLSL 869
Score = 56 (24.8 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 24/81 (29%), Positives = 40/81 (49%)
Query: 46 VTKVNGFIVYSRVKRSRFSNSDDLLEDDVIDKRINSKIHEGR---INKVVK--NVLNENG 100
VTKV S ++ S D LLE + KR+ ++I + IN++ K N+L E
Sbjct: 209 VTKVEE--KKSGIQVSAKQIEDRLLEVKHLYKRVENQIKMAKMVLINEINKRANILLEQ- 265
Query: 101 ILESVVEEENQLVQMTVENVI 121
LE + E Q ++ ++ V+
Sbjct: 266 -LEKITNERRQKLEQQLQGVV 285
Score = 47 (21.6 bits), Expect = 4.4e-06, Sum P(3) = 4.4e-06
Identities = 29/139 (20%), Positives = 51/139 (36%)
Query: 266 CSCSLCNGC--RVIPPSKFEIHACKQYRRAS-QYICFENGKSLLEVLRAC--RSVPLPML 320
C S C C +PP F+ + + + I S L + C R V
Sbjct: 25 CLHSFCKDCLPEEMPPCNFKCPITPGFNSGNVERIGI---LSCLACKQTCFARDVVENCF 81
Query: 321 KATLQSALSSLPEEKSFACVRCKGTFPITCVGKTGPGPLCNSCVKSKKPQGTMTYTTGIR 380
+A S++ +E + +C CK P + + LC++C + + G I
Sbjct: 82 LKDFPTANSAMAKEGNQSCSMCKEKRPAHSLCTSCNKWLCSTCTEEHR-HGKFVRVQLI- 139
Query: 381 IRASGPKLVSRSSENDSMC 399
++ G +SE +C
Sbjct: 140 LKVEGVATEEEASELPLLC 158
Score = 45 (20.9 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 22/106 (20%), Positives = 41/106 (38%)
Query: 366 SKKPQGTMTYTTGIRIRASGPKLVSRSSENDSMCISYQNNXXXXXXXXXXXXADXXXXXX 425
SK + +T + + ++ + + S++ SMCI + + +D
Sbjct: 661 SKSQASSRKISTTMSLNSNSGAIRNDKSQDTSMCILLKPSLHRKVTTFIHLMSDLNLISS 720
Query: 426 XXXXXXRNLL--KTRSPWELTRNSSRPGLIANSTPVT-SVHKSSQS 468
NL+ ++S W + S L+ +S V SV SS S
Sbjct: 721 KSSFHV-NLIPANSKSQWNYSCKQSGLSLLESSLQVVGSVCHSSAS 765
Score = 42 (19.8 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 27 QASDCVKAACENVRCKRFKVTKVNGFIVYSRVKRSRFSNSDDLLEDDVIDKRINSKIHEG 86
Q S+ V + CE + K + K+ G ++ S+SD LL +V + + + ++ G
Sbjct: 351 QLSNFVNSVCEEWKYKPYTPVKIIGGFT---MEGGHTSHSDVLLCGNV--QGLQTPLYHG 405
Query: 87 RINKV 91
+ V
Sbjct: 406 HCSPV 410
Score = 39 (18.8 bits), Expect = 5.7e-07, Sum P(3) = 5.7e-07
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 531 YAC---GQKLLEGYKNGLGIICH 550
Y+C G LLE +G +CH
Sbjct: 739 YSCKQSGLSLLESSLQVVGSVCH 761
>UNIPROTKB|I3LF49 [details] [associations]
symbol:I3LF49 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 Ensembl:ENSSSCT00000030965
Uniprot:I3LF49
Length = 591
Score = 162 (62.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 37/116 (31%), Positives = 63/116 (54%)
Query: 585 LHQLAISLSKGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKEC--ASLSSIPQGDWY 642
+H+ A G N+D C +C +GG+LL C+ CP+ FH C +L S P GDW
Sbjct: 349 MHRSARIGGDGSNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWI 408
Query: 643 CKYCQNMFERKRFLQHDANAVEAGR----VSGVDSVEQITKRCIRIVKNLEA-ELS 693
C +C+++ K +++D + ++ + V G+ V+Q ++C R++ L ELS
Sbjct: 409 CTFCRDI--GKPEVEYDCDNLQHSKKGKTVQGLSPVDQ--RKCERLLLYLYCHELS 460
Score = 43 (20.2 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 466 SQSQRQRKITKKSKKTVLISKPFENASPPLS 496
S + +Q K + ++S P + +PPLS
Sbjct: 270 SGAVKQEKTEDGRRSACMLSSPESSLTPPLS 300
Score = 37 (18.1 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 313 RSVPLPMLKATLQSALSSLPEEKS 336
++ P M ++ QS LSSL KS
Sbjct: 320 KTEPTDMNESCKQSGLSSLVNGKS 343
>UNIPROTKB|F1MFF9 [details] [associations]
symbol:Bt.62145 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:DAAA02043090 IPI:IPI00688794
Ensembl:ENSBTAT00000010688 Uniprot:F1MFF9
Length = 1852
Score = 133 (51.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQ 647
D+ D C +C GG ++ CD CPRA+H C L P+G W C +C+
Sbjct: 286 DHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCE 333
Score = 84 (34.6 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 23/66 (34%), Positives = 31/66 (46%)
Query: 698 CRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCSRINS 755
CR C K G G +L CD C +H+ CL L E+P G+W C C C +
Sbjct: 364 CRVC---KDG-GE--LLCCDACPSSYHLHCLNP----PLPEIPNGEWLCPRCT-CPPLKG 412
Query: 756 VLQNLL 761
+Q +L
Sbjct: 413 KVQRIL 418
>UNIPROTKB|F1P5H8 [details] [associations]
symbol:TRIM33 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0017015 "regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0030514 "negative regulation of BMP signaling
pathway" evidence=IEA] [GO:0070410 "co-SMAD binding" evidence=IEA]
[GO:0070412 "R-SMAD binding" evidence=IEA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 GO:GO:0030514 GO:GO:0017015
GeneTree:ENSGT00530000062982 OMA:PIRSLMH EMBL:AADN02045019
IPI:IPI00589805 Ensembl:ENSGALT00000003070 Uniprot:F1P5H8
Length = 947
Score = 166 (63.5 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 37/116 (31%), Positives = 66/116 (56%)
Query: 585 LHQLAISLSKGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKEC--ASLSSIPQGDWY 642
+H+ A + +G N+D C +C +GG+LL C+ CP+ FH C +L S P GDW
Sbjct: 705 MHRSARTGGEGTNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWI 764
Query: 643 CKYCQNMFERKRFLQHDANAVE---AGRVS-GVDSVEQITKRCIRIVKNLEA-ELS 693
C +C+++ K +++D + ++ G+ + G+ V+Q ++C R++ L ELS
Sbjct: 765 CTFCRDL--SKPEVEYDCDNLQHSKKGKTAQGLSPVDQ--RKCERLLLYLYCHELS 816
Score = 43 (20.2 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 466 SQSQRQRKITKKSKKTVLISKPFENASPPLS 496
S + +Q K + ++S P + +PPLS
Sbjct: 627 SGAVKQEKTEDGRRSACMLSSPESSLTPPLS 657
>UNIPROTKB|E1BIC4 [details] [associations]
symbol:AIRE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006959 "humoral
immune response" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0045182 "translation regulator activity"
evidence=IEA] InterPro:IPR000770 InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR008087 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01342 Pfam:PF03172 PRINTS:PR01711
PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249
SMART:SM00258 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0006417 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
GO:GO:0045944 GO:GO:0003682 GO:GO:0045182 GO:GO:0044212
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 OMA:NDDECAV
GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763
GeneTree:ENSGT00440000034278 EMBL:DAAA02003438 EMBL:DAAA02003439
IPI:IPI00693894 Ensembl:ENSBTAT00000031852 Uniprot:E1BIC4
Length = 561
Score = 154 (59.3 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 27/46 (58%), Positives = 29/46 (63%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYC 646
N+D C C DGG LL CDGCPRAFH C + LS IP G W C C
Sbjct: 303 NEDECAACRDGGELLCCDGCPRAFHLACLTPPLSEIPSGTWRCSNC 348
>UNIPROTKB|H7C0U2 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
EMBL:CH471077 GO:GO:0046872 GO:GO:0008270 GO:GO:0016301
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR000313
PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666 UniGene:Hs.446240
UniGene:Hs.658553 UniGene:Hs.668465 HGNC:HGNC:9397
InterPro:IPR021931 Pfam:PF12064 EMBL:AL390212 SMR:H7C0U2
Ensembl:ENST00000446994 Uniprot:H7C0U2
Length = 1105
Score = 155 (59.6 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 53/201 (26%), Positives = 92/201 (45%)
Query: 568 SSRRKPYAHIYTSNGVSLHQLAISLSKGRQYPG------KD----NDDLCTICADGGNLL 617
+ +RK + ++SNG S + S K ++ PG K+ ND C +C G +L
Sbjct: 17 AQKRKFPSPPHSSNGHSPQDTSTSPIKKKKKPGLLNSNNKEQDGRNDFYCWVCHREGQVL 76
Query: 618 PCDGCPRAFHKECASLSSIPQGDWYCKYCQ-NMFERKRFL-QHDANAVEAGRVSGVDSVE 675
C+ CPR +H +C L+S P+GDW+C C+ + F++ L QH A + ++E
Sbjct: 77 CCELCPRVYHAKCLRLTSEPEGDWFCPECETDAFQKPVPLEQHPDYAEYIFHPMDLCTLE 136
Query: 676 QITKR----CIR-IVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKK 730
+ K+ C + + + L C++ G + + I +C+ E V C +
Sbjct: 137 KNAKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIEV-CPEC 195
Query: 731 HKMADLRELPKGKWFCCMDCS 751
+ A + + WFC CS
Sbjct: 196 YLAACQK---RDNWFC-EPCS 212
>UNIPROTKB|I3LBT0 [details] [associations]
symbol:I3LBT0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 Ensembl:ENSSSCT00000029002
Uniprot:I3LBT0
Length = 945
Score = 162 (62.1 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 37/116 (31%), Positives = 63/116 (54%)
Query: 585 LHQLAISLSKGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKEC--ASLSSIPQGDWY 642
+H+ A G N+D C +C +GG+LL C+ CP+ FH C +L S P GDW
Sbjct: 686 MHRSARIGGDGSNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWI 745
Query: 643 CKYCQNMFERKRFLQHDANAVEAGR----VSGVDSVEQITKRCIRIVKNLEA-ELS 693
C +C+++ K +++D + ++ + V G+ V+Q ++C R++ L ELS
Sbjct: 746 CTFCRDI--GKPEVEYDCDNLQHSKKGKTVQGLSPVDQ--RKCERLLLYLYCHELS 797
Score = 43 (20.2 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 466 SQSQRQRKITKKSKKTVLISKPFENASPPLS 496
S + +Q K + ++S P + +PPLS
Sbjct: 607 SGAVKQEKTEDGRRSACMLSSPESSLTPPLS 637
Score = 37 (18.1 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 313 RSVPLPMLKATLQSALSSLPEEKS 336
++ P M ++ QS LSSL KS
Sbjct: 657 KTEPTDMNESCKQSGLSSLVNGKS 680
>UNIPROTKB|I3LD78 [details] [associations]
symbol:I3LD78 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 Ensembl:ENSSSCT00000022292 OMA:HCLELED
Uniprot:I3LD78
Length = 948
Score = 162 (62.1 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 37/116 (31%), Positives = 63/116 (54%)
Query: 585 LHQLAISLSKGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKEC--ASLSSIPQGDWY 642
+H+ A G N+D C +C +GG+LL C+ CP+ FH C +L S P GDW
Sbjct: 689 MHRSARIGGDGSNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWI 748
Query: 643 CKYCQNMFERKRFLQHDANAVEAGR----VSGVDSVEQITKRCIRIVKNLEA-ELS 693
C +C+++ K +++D + ++ + V G+ V+Q ++C R++ L ELS
Sbjct: 749 CTFCRDI--GKPEVEYDCDNLQHSKKGKTVQGLSPVDQ--RKCERLLLYLYCHELS 800
Score = 43 (20.2 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 466 SQSQRQRKITKKSKKTVLISKPFENASPPLS 496
S + +Q K + ++S P + +PPLS
Sbjct: 610 SGAVKQEKTEDGRRSACMLSSPESSLTPPLS 640
Score = 37 (18.1 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 313 RSVPLPMLKATLQSALSSLPEEKS 336
++ P M ++ QS LSSL KS
Sbjct: 660 KTEPTDMNESCKQSGLSSLVNGKS 683
>MGI|MGI:1338803 [details] [associations]
symbol:Aire "autoimmune regulator (autoimmune
polyendocrinopathy candidiasis ectodermal dystrophy)" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005622 "intracellular"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006959 "humoral
immune response" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045182 "translation regulator activity" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP;IDA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000770 InterPro:IPR001965 InterPro:IPR004865
InterPro:IPR008087 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342
Pfam:PF03172 PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864
PROSITE:PS51414 SMART:SM00184 SMART:SM00249 SMART:SM00258
MGI:MGI:1338803 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0006417 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
GO:GO:0045944 GO:GO:0006351 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 CTD:326 eggNOG:NOG317492 HOVERGEN:HBG014961
KO:K10603 OMA:NDDECAV GO:GO:0042393 GO:GO:0006959
Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763 EMBL:AF105002
EMBL:AF128772 EMBL:AF128773 EMBL:AJ007715 EMBL:AF079536
EMBL:AJ132243 EMBL:AF128115 EMBL:AF128116 EMBL:AF128117
EMBL:AF128118 EMBL:AF128119 EMBL:AF128120 EMBL:AF128121
EMBL:AF128122 EMBL:AF128123 EMBL:AF128124 EMBL:AF128125
EMBL:AJ243821 IPI:IPI00129025 IPI:IPI00223523 IPI:IPI00223524
IPI:IPI00223525 IPI:IPI00230215 IPI:IPI00230216 IPI:IPI00230217
IPI:IPI00230218 IPI:IPI00230219 IPI:IPI00230220 IPI:IPI00230221
IPI:IPI00400171 RefSeq:NP_001258478.1 RefSeq:NP_001258479.1
RefSeq:NP_001258480.1 RefSeq:NP_001258481.1 RefSeq:NP_001258482.1
RefSeq:NP_001258483.1 RefSeq:NP_001258484.1 RefSeq:NP_001258485.1
RefSeq:NP_001258486.1 RefSeq:NP_001258487.1 RefSeq:NP_001258488.1
RefSeq:NP_033776.1 UniGene:Mm.35300 ProteinModelPortal:Q9Z0E3
SMR:Q9Z0E3 DIP:DIP-31030N IntAct:Q9Z0E3 STRING:Q9Z0E3
PhosphoSite:Q9Z0E3 PRIDE:Q9Z0E3 Ensembl:ENSMUST00000019257
Ensembl:ENSMUST00000105395 Ensembl:ENSMUST00000105396
Ensembl:ENSMUST00000128241 Ensembl:ENSMUST00000130972
Ensembl:ENSMUST00000140636 Ensembl:ENSMUST00000145975
Ensembl:ENSMUST00000148469 Ensembl:ENSMUST00000154374
Ensembl:ENSMUST00000155021 Ensembl:ENSMUST00000156417 GeneID:11634
KEGG:mmu:11634 UCSC:uc007fws.1 UCSC:uc007fwt.1 UCSC:uc007fwu.1
UCSC:uc007fwv.1 UCSC:uc007fww.1 UCSC:uc007fwx.1 UCSC:uc007fwz.1
UCSC:uc007fxa.1 UCSC:uc007fxb.1 GeneTree:ENSGT00440000034278
InParanoid:Q9Z0E3 ChiTaRS:AIRE NextBio:279201 Bgee:Q9Z0E3
Genevestigator:Q9Z0E3 GermOnline:ENSMUSG00000000731 Uniprot:Q9Z0E3
Length = 552
Score = 151 (58.2 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 26/46 (56%), Positives = 29/46 (63%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYC 646
N+D C +C DGG L+ CDGCPRAFH C S L IP G W C C
Sbjct: 297 NEDECAVCHDGGELICCDGCPRAFHLACLSPPLQEIPSGLWRCSCC 342
>UNIPROTKB|E7EN20 [details] [associations]
symbol:TRIM33 "E3 ubiquitin-protein ligase TRIM33"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 EMBL:AL390241 EMBL:AL035410 HGNC:HGNC:16290
ChiTaRS:TRIM33 IPI:IPI00748247 ProteinModelPortal:E7EN20 SMR:E7EN20
Ensembl:ENST00000450349 UCSC:uc010owr.2 ArrayExpress:E7EN20
Bgee:E7EN20 Uniprot:E7EN20
Length = 759
Score = 160 (61.4 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 37/116 (31%), Positives = 64/116 (55%)
Query: 585 LHQLAISLSKGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKEC--ASLSSIPQGDWY 642
+H+ A G N+D C +C +GG+LL C+ CP+ FH C +L S P GDW
Sbjct: 500 MHRSARIGGDGNNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWI 559
Query: 643 CKYCQNMFERKRFLQHDANAVE---AGRVS-GVDSVEQITKRCIRIVKNLEA-ELS 693
C +C+++ K +++D + ++ G+ + G+ V+Q ++C R++ L ELS
Sbjct: 560 CTFCRDI--GKPEVEYDCDNLQHSKKGKTAQGLSPVDQ--RKCERLLLYLYCHELS 611
Score = 42 (19.8 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 470 RQRKITKKSKKTVLISKPFENASPPLS 496
+Q K + ++S P + +PPLS
Sbjct: 425 KQEKTEDGRRSACMLSSPESSLTPPLS 451
>UNIPROTKB|O15164 [details] [associations]
symbol:TRIM24 "Transcription intermediary factor 1-alpha"
species:9606 "Homo sapiens" [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0005719 "nuclear euchromatin" evidence=IEA]
[GO:0005726 "perichromatin fibrils" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0016922 "ligand-dependent nuclear receptor binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IEA] [GO:0070562 "regulation of vitamin D
receptor signaling pathway" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0003713 "transcription coactivator activity"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0071391 "cellular response to estrogen stimulus" evidence=IDA]
[GO:0034056 "estrogen response element binding" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0035064
"methylated histone residue binding" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0002039 "p53 binding"
evidence=IPI] [GO:0042981 "regulation of apoptotic process"
evidence=IMP] [GO:0031647 "regulation of protein stability"
evidence=IMP] [GO:0030163 "protein catabolic process" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005102
"receptor binding" evidence=TAS] [GO:0006366 "transcription from
RNA polymerase II promoter" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005829 GO:GO:0005634 Reactome:REACT_116125 GO:GO:0045892
GO:GO:0045893 GO:GO:0008285 GO:GO:0042981 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0005102 GO:GO:0046777
GO:GO:0003682 GO:GO:0004672 GO:GO:0031647 GO:GO:0003713
GO:GO:0006366 GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 EMBL:CH236950
EMBL:CH471070 GO:GO:0055074 InterPro:IPR017907 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577
InterPro:IPR018359 GO:GO:0071391 MIM:188550 Orphanet:146
GO:GO:0034056 PDB:3O34 PDB:3O35 PDB:3O37 PDBsum:3O34 PDBsum:3O35
PDBsum:3O37 PDB:3O36 PDBsum:3O36 GO:GO:0070562 GO:GO:0005726
EMBL:AC013429 EMBL:AF009353 EMBL:AF119042 EMBL:AK075306
EMBL:AC008265 EMBL:BC028689 IPI:IPI00005184 IPI:IPI00184317
RefSeq:NP_003843.3 RefSeq:NP_056989.2 UniGene:Hs.490287 PDB:2YYN
PDB:3O33 PDBsum:2YYN PDBsum:3O33 ProteinModelPortal:O15164
SMR:O15164 DIP:DIP-52713N IntAct:O15164 STRING:O15164
PhosphoSite:O15164 PaxDb:O15164 PRIDE:O15164 DNASU:8805
Ensembl:ENST00000343526 Ensembl:ENST00000415680 GeneID:8805
KEGG:hsa:8805 UCSC:uc003vub.3 UCSC:uc003vuc.3 CTD:8805
GeneCards:GC07P138144 HGNC:HGNC:11812 HPA:HPA043495 MIM:603406
neXtProt:NX_O15164 PharmGKB:PA36519 HOGENOM:HOG000252971
HOVERGEN:HBG054599 InParanoid:O15164 KO:K08881 OMA:FWAQNIF
OrthoDB:EOG4P8FH9 PhylomeDB:O15164 ChiTaRS:TRIM24
EvolutionaryTrace:O15164 GenomeRNAi:8805 NextBio:33028
ArrayExpress:O15164 Bgee:O15164 CleanEx:HS_TRIM24
Genevestigator:O15164 GermOnline:ENSG00000122779 Uniprot:O15164
Length = 1050
Score = 154 (59.3 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 30/90 (33%), Positives = 52/90 (57%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKEC--ASLSSIPQGDWYCKYCQNMFERKRFLQHDA 660
N+D C +C +GG LL C+ CP+ FH C +L++ P G+W C +C+++ K +++D
Sbjct: 825 NEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDL--SKPEVEYDC 882
Query: 661 NAV----EAGRVSGVDSVEQITKR-CIRIV 685
+A E + G+ + I KR C R++
Sbjct: 883 DAPSHNSEKKKTEGLVKLTPIDKRKCERLL 912
>UNIPROTKB|E2RNG5 [details] [associations]
symbol:LOC609728 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00249 SMART:SM00297 SMART:SM00336
SMART:SM00502 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 OMA:FWAQNIF
GeneTree:ENSGT00530000062982 EMBL:AAEX03010233
Ensembl:ENSCAFT00000006974 Uniprot:E2RNG5
Length = 1052
Score = 154 (59.3 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 30/90 (33%), Positives = 52/90 (57%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKEC--ASLSSIPQGDWYCKYCQNMFERKRFLQHDA 660
N+D C +C +GG LL C+ CP+ FH C +L++ P G+W C +C+++ K +++D
Sbjct: 827 NEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLANFPSGEWICTFCRDL--SKPEVEYDC 884
Query: 661 NAV----EAGRVSGVDSVEQITKR-CIRIV 685
+A E + G+ + I KR C R++
Sbjct: 885 DAPSHNSEKKKTEGLVKLTPIDKRKCERLL 914
>DICTYBASE|DDB_G0277341 [details] [associations]
symbol:DDB_G0277341 "PHD zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 dictyBase:DDB_G0277341 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AAFI02000019 eggNOG:NOG145066
RefSeq:XP_642746.2 ProteinModelPortal:Q86K47 SMR:Q86K47
EnsemblProtists:DDB0219998 GeneID:8620936 KEGG:ddi:DDB_G0277341
InParanoid:Q86K47 OMA:ASMPSEF Uniprot:Q86K47
Length = 914
Score = 147 (56.8 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 34/93 (36%), Positives = 48/93 (51%)
Query: 556 VSPSQFEAHAGWSSRRKPYAHIYTSNGVSLHQLAISLSKGRQYPGKDNDDLCTICADGGN 615
V PS ++ +R+P + S QL + K ++ G NDD C+ C DGG+
Sbjct: 21 VDPSNTNSNLPQKRQRRPSSEYLES------QLPKTNLKNKR--GVINDDYCSGCGDGGD 72
Query: 616 LLPCDGCPRAFHKECAS--LSSIPQGDWYCKYC 646
LL CD C +FH C + L+ IP GDW+C C
Sbjct: 73 LLCCDNCQASFHLICLNPPLNEIPSGDWFCDSC 105
Score = 57 (25.1 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 699 RGCDFSKSGFGPRTILLCDQCEREFHVGCLK 729
+GC K I+ C++C FH CL+
Sbjct: 195 KGCQSCKDSSNQTDIVQCNRCNSCFHTFCLE 225
>UNIPROTKB|J3QQU3 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AC024267 HGNC:HGNC:20816
ChiTaRS:PHF12 ProteinModelPortal:J3QQU3 Ensembl:ENST00000583524
Uniprot:J3QQU3
Length = 129
Score = 126 (49.4 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECAS--LSS--IPQGDWYCKYC 646
N D C C +GG+LL CD CP AFH +C + LS +P G+W C C
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
>UNIPROTKB|O15016 [details] [associations]
symbol:TRIM66 "Tripartite motif-containing protein 66"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0016235 "aggresome" evidence=IDA]
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00502 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016235 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 EMBL:AJ400879 EMBL:AC091053
EMBL:AB002296 EMBL:AC104360 IPI:IPI00004420 IPI:IPI00941834
RefSeq:NP_055633.1 UniGene:Hs.130836 ProteinModelPortal:O15016
SMR:O15016 STRING:O15016 PhosphoSite:O15016 PaxDb:O15016
PRIDE:O15016 Ensembl:ENST00000299550 GeneID:9866 KEGG:hsa:9866
UCSC:uc010rbo.2 CTD:9866 GeneCards:GC11M008595 H-InvDB:HIX0201585
HGNC:HGNC:29005 HPA:HPA027420 MIM:612000 neXtProt:NX_O15016
PharmGKB:PA134954583 HOGENOM:HOG000074104 HOVERGEN:HBG057849
KO:K12032 GenomeRNAi:9866 NextBio:37189 ArrayExpress:O15016
Bgee:O15016 CleanEx:HS_TRIM66 Genevestigator:O15016
GermOnline:ENSG00000166436 Uniprot:O15016
Length = 1216
Score = 157 (60.3 bits), Expect = 8.2e-07, Sum P(3) = 8.2e-07
Identities = 37/102 (36%), Positives = 59/102 (57%)
Query: 594 KGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKEC--ASLSSIPQGDWYCKYCQNMFE 651
KG P +N+D C +C +GG LL CD CP+ FH C +L S P G+W C C+++ +
Sbjct: 961 KGPPAP-IENEDFCAVCLNGGELLCCDRCPKVFHLSCHVPALLSFPGGEWVCTLCRSLTQ 1019
Query: 652 RKRFLQHDA-NAV--EAG-RVS-GVDSVEQITKRCIRIVKNL 688
+ +++D NA + G R S G+ +Q K+C ++V +L
Sbjct: 1020 PE--MEYDCENACYNQPGMRASPGLSMYDQ--KKCEKLVLSL 1057
Score = 48 (22.0 bits), Expect = 8.2e-07, Sum P(3) = 8.2e-07
Identities = 19/73 (26%), Positives = 29/73 (39%)
Query: 145 PRKEGGSEVSNGLNKKCLKRP---SAMKPKVEPVEVLVTQSEGFGNESMSLIEVEAIAEG 201
PR + N L K L+ P S KP + PV T + + N E E +G
Sbjct: 783 PRDGADPSLENALCKVKLEEPINLSVKKPPLAPVVSTSTALQQYQNPK----ECENFEQG 838
Query: 202 SALTSPKKNLELK 214
+ K+N ++
Sbjct: 839 ALELDAKENQSIR 851
Score = 48 (22.0 bits), Expect = 8.2e-07, Sum P(3) = 8.2e-07
Identities = 16/71 (22%), Positives = 35/71 (49%)
Query: 59 KRSRFSNSDDLLEDDVIDKRINSKIHEGRINK---VVKNVLNE--NGI---LESVVEEEN 110
K+S S +ED + + + + E +I V+ N LN+ NG+ LE + E
Sbjct: 122 KKSSLQTSAKQIEDRIFEVKHQHRKVENQIKMAKMVLMNELNKQANGLIEELEGITNERK 181
Query: 111 QLVQMTVENVI 121
+ ++ +++++
Sbjct: 182 RKLEQQLQSIM 192
Score = 40 (19.1 bits), Expect = 5.1e-06, Sum P(3) = 5.1e-06
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 317 LPMLKATLQ-SALSSLPEEKSFAC 339
+P +LQ SAL LP EK AC
Sbjct: 354 VPQQLGSLQCSAL--LPREKELAC 375
Score = 38 (18.4 bits), Expect = 9.8e-05, Sum P(3) = 9.8e-05
Identities = 5/23 (21%), Positives = 18/23 (78%)
Query: 468 SQRQRKITKKSKKTVLISKPFEN 490
++R+RK+ ++ + +++++ FE+
Sbjct: 178 NERKRKLEQQLQSIMVLNRQFEH 200
Score = 37 (18.1 bits), Expect = 6.2e-05, Sum P(3) = 6.2e-05
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 133 CKEE----PISKVECFPRKEGGSEVSNG 156
C EE P+ FPR + GS NG
Sbjct: 29 CTEEHRHSPVPGGPFFPRAQKGSPGVNG 56
>TAIR|locus:2162509 [details] [associations]
symbol:AT5G22760 "AT5G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009630 "gravitropism" evidence=RCA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 Prosite:PS00018 EMBL:CP002688 GO:GO:0046872
GO:GO:0008270 InterPro:IPR018247 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 IPI:IPI00532034 RefSeq:NP_197668.2 UniGene:At.43647
PRIDE:F4KBB1 EnsemblPlants:AT5G22760.1 GeneID:832339
KEGG:ath:AT5G22760 OMA:SHFPSIV Uniprot:F4KBB1
Length = 1566
Score = 131 (51.2 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 24/51 (47%), Positives = 27/51 (52%)
Query: 599 PGKD-NDDLCTICADGGNLLPCDGCPRAFHKECASLSS--IPQGDWYCKYC 646
P D N D C +C G LL CDGCP A+H C + IP G WYC C
Sbjct: 407 PDLDANSDECRLCGMDGTLLCCDGCPLAYHSRCIGVVKMYIPDGPWYCPEC 457
Score = 78 (32.5 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 33/133 (24%), Positives = 57/133 (42%)
Query: 701 CDFSKSGFGPR-TILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRINSV--- 756
C K + P T + C C+ +H+ +K + ++P+ F C C RI S
Sbjct: 1245 CWICKLPYNPGLTYIHCTSCDMWYHIEAVKLEES----KIPEVVGFKCCRCRRIRSPDCP 1300
Query: 757 LQNLLVQEAEKLPEFHLNAIKKYAGNSLETVSDIDVRWRLLSGKAATPETRLLLSQAVAI 816
+ ++E +++ + K GN T D D R+ K + P T LS+ +
Sbjct: 1301 YMDPKLKEQKQMKQVFFRRQKHGQGN---TGIDSDSE-RMSEPKDSLPSTPSFLSEDTFV 1356
Query: 817 FHDCFDPIVDSIS 829
D DP++ S+S
Sbjct: 1357 PED--DPLLVSVS 1367
>ZFIN|ZDB-GENE-030131-2773 [details] [associations]
symbol:trim33 "tripartite motif-containing 33"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0033333
"fin development" evidence=IMP] [GO:0030218 "erythrocyte
differentiation" evidence=IGI;IMP] [GO:0034243 "regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IGI] [GO:0035162 "embryonic hemopoiesis" evidence=IMP]
[GO:0035166 "post-embryonic hemopoiesis" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00249 SMART:SM00297 SMART:SM00336
SMART:SM00502 Prosite:PS00518 ZFIN:ZDB-GENE-030131-2773
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 GO:GO:0030218
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0034243
GO:GO:0035166 GO:GO:0060215 HOGENOM:HOG000252971 HOVERGEN:HBG054599
GeneTree:ENSGT00530000062982 CTD:51592 KO:K08883 GO:GO:0033333
EMBL:BX321886 IPI:IPI00512685 RefSeq:NP_001002871.2
UniGene:Dr.80165 SMR:B0S5U2 Ensembl:ENSDART00000020116
GeneID:324053 KEGG:dre:324053 NextBio:20808565 Uniprot:B0S5U2
Length = 1176
Score = 153 (58.9 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKEC--ASLSSIPQGDWYCKYCQNM 649
N+D C +C +GG LL CD CP+ FH C +L S P GDW C +C+N+
Sbjct: 933 NEDWCAVCQNGGELLCCDHCPKVFHITCHIPTLKSSPSGDWMCTFCRNL 981
>UNIPROTKB|H0Y612 [details] [associations]
symbol:TRIM33 "E3 ubiquitin-protein ligase TRIM33"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AL390241
EMBL:AL035410 HGNC:HGNC:16290 ChiTaRS:TRIM33
ProteinModelPortal:H0Y612 PRIDE:H0Y612 Ensembl:ENST00000448034
Bgee:H0Y612 Uniprot:H0Y612
Length = 888
Score = 160 (61.4 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 37/116 (31%), Positives = 64/116 (55%)
Query: 585 LHQLAISLSKGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKEC--ASLSSIPQGDWY 642
+H+ A G N+D C +C +GG+LL C+ CP+ FH C +L S P GDW
Sbjct: 629 MHRSARIGGDGNNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWI 688
Query: 643 CKYCQNMFERKRFLQHDANAVE---AGRVS-GVDSVEQITKRCIRIVKNLEA-ELS 693
C +C+++ K +++D + ++ G+ + G+ V+Q ++C R++ L ELS
Sbjct: 689 CTFCRDI--GKPEVEYDCDNLQHSKKGKTAQGLSPVDQ--RKCERLLLYLYCHELS 740
Score = 42 (19.8 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 470 RQRKITKKSKKTVLISKPFENASPPLS 496
+Q K + ++S P + +PPLS
Sbjct: 554 KQEKTEDGRRSACMLSSPESSLTPPLS 580
>RGD|1307339 [details] [associations]
symbol:Trim33 "tripartite motif-containing 33" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0017015 "regulation of transforming growth factor
beta receptor signaling pathway" evidence=ISO] [GO:0030514
"negative regulation of BMP signaling pathway" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0070410 "co-SMAD binding" evidence=ISO]
[GO:0070412 "R-SMAD binding" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
Pfam:PF13639 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 RGD:1307339
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 IPI:IPI00957392
Ensembl:ENSRNOT00000025600 UCSC:RGD:1307339 NextBio:688291
ArrayExpress:D3ZUM5 Uniprot:D3ZUM5
Length = 1127
Score = 160 (61.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 37/116 (31%), Positives = 64/116 (55%)
Query: 585 LHQLAISLSKGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKEC--ASLSSIPQGDWY 642
+H+ A G N+D C +C +GG+LL C+ CP+ FH C +L S P GDW
Sbjct: 885 MHRSARIGGDGNSKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWI 944
Query: 643 CKYCQNMFERKRFLQHDANAVE---AGRVS-GVDSVEQITKRCIRIVKNLEA-ELS 693
C +C+++ K +++D + ++ G+ + G+ V+Q ++C R++ L ELS
Sbjct: 945 CTFCRDI--GKPEVEYDCDNMQHSKKGKTAQGLSPVDQ--RKCERLLLYLYCHELS 996
Score = 43 (20.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 466 SQSQRQRKITKKSKKTVLISKPFENASPPLS 496
S + +Q K + ++S P + +PPLS
Sbjct: 806 SGAVKQEKTEDGRRSACMLSSPESSLTPPLS 836
Score = 42 (19.8 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 26/89 (29%), Positives = 42/89 (47%)
Query: 150 GSEVSNGLNKKCLKRPSAMKPKVEPVEVLVTQSEGFGNESMSL---IEVEAIAEG--SA- 203
GS S G + + ++ SA K + V+V Q G E S ++ E +G SA
Sbjct: 766 GSRGSCGSSGRTAEK-SAHSFKSDQVKV--KQEPGTEEEICSFSGAVKQEKTEDGRRSAC 822
Query: 204 -LTSPKKNLELKMSKKISLNKKPMTVTEL 231
L+SP+ +L +S + L + T+T L
Sbjct: 823 MLSSPESSLTPPLSTNLHLESELDTLTSL 851
>FB|FBgn0029861 [details] [associations]
symbol:CG3815 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0070822 "Sin3-type complex" evidence=IDA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 EMBL:AE014298 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0070822 HSSP:Q14839
eggNOG:NOG145066 GeneTree:ENSGT00440000033777 EMBL:AY069054
RefSeq:NP_572311.1 UniGene:Dm.2312 SMR:Q9W410 IntAct:Q9W410
MINT:MINT-921456 STRING:Q9W410 EnsemblMetazoa:FBtr0070899
GeneID:31571 KEGG:dme:Dmel_CG3815 UCSC:CG3815-RA
FlyBase:FBgn0029861 InParanoid:Q9W410 OMA:SEFGTEV OrthoDB:EOG45HQC9
GenomeRNAi:31571 NextBio:774240 Uniprot:Q9W410
Length = 878
Score = 138 (53.6 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 31/80 (38%), Positives = 40/80 (50%)
Query: 599 PGKD-NDDLCTICADGGNLLPCDGCPRAFHKEC----ASLSSIPQGDWYCKYCQNMFERK 653
PG+ N D C C +GGNLL CD CP +FH +C S IP G W C C+
Sbjct: 47 PGRGHNHDYCDACEEGGNLLCCDRCPSSFHLQCHDPPLSEEDIPSGQWLCHSCR----MS 102
Query: 654 RFLQHDANAVEAGRVSGVDS 673
+ Q A++ +A V V S
Sbjct: 103 KLSQPPASSSKASSVERVPS 122
Score = 63 (27.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 18/63 (28%), Positives = 23/63 (36%)
Query: 686 KNLEAELSGC--LLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGK 743
K E + G L + C + ++ CD C FH CL L LP G
Sbjct: 242 KPFELDAQGLVPLPAKTCFYCTRSCKRAPLISCDYCPLYFHQDCLDP----PLTALPAGL 297
Query: 744 WFC 746
W C
Sbjct: 298 WMC 300
>MGI|MGI:2137357 [details] [associations]
symbol:Trim33 "tripartite motif-containing 33" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0017015 "regulation
of transforming growth factor beta receptor signaling pathway"
evidence=ISO] [GO:0030514 "negative regulation of BMP signaling
pathway" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0070410 "co-SMAD binding" evidence=ISO]
[GO:0070412 "R-SMAD binding" evidence=ISO] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 Pfam:PF13639 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
UniPathway:UPA00143 MGI:MGI:2137357 Prosite:PS00518 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0070412 InterPro:IPR017907
Gene3D:1.20.920.10 SUPFAM:SSF47370 eggNOG:COG5076 GO:GO:0030514
GO:GO:0017015 GO:GO:0070410 HOGENOM:HOG000252971 HOVERGEN:HBG054599
CTD:51592 KO:K08883 OrthoDB:EOG4SN1N0 EMBL:AY458590 EMBL:AK129293
EMBL:AF220138 IPI:IPI00409904 IPI:IPI00480381 RefSeq:NP_001073299.1
RefSeq:NP_444400.2 UniGene:Mm.195036 ProteinModelPortal:Q99PP7
SMR:Q99PP7 DIP:DIP-59674N IntAct:Q99PP7 STRING:Q99PP7
PhosphoSite:Q99PP7 PaxDb:Q99PP7 PRIDE:Q99PP7 GeneID:94093
KEGG:mmu:94093 UCSC:uc008qsv.1 UCSC:uc008qsw.1 InParanoid:Q99PP7
NextBio:352085 Bgee:Q99PP7 CleanEx:MM_TRIM33 Genevestigator:Q99PP7
GermOnline:ENSMUSG00000033014 Uniprot:Q99PP7
Length = 1142
Score = 160 (61.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 37/116 (31%), Positives = 64/116 (55%)
Query: 585 LHQLAISLSKGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKEC--ASLSSIPQGDWY 642
+H+ A G N+D C +C +GG+LL C+ CP+ FH C +L S P GDW
Sbjct: 883 MHRSARIGGDGNSKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWI 942
Query: 643 CKYCQNMFERKRFLQHDANAVE---AGRVS-GVDSVEQITKRCIRIVKNLEA-ELS 693
C +C+++ K +++D + ++ G+ + G+ V+Q ++C R++ L ELS
Sbjct: 943 CTFCRDI--GKPEVEYDCDNMQHSKKGKTAQGLSPVDQ--RKCERLLLYLYCHELS 994
Score = 43 (20.2 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 466 SQSQRQRKITKKSKKTVLISKPFENASPPLS 496
S + +Q K + ++S P + +PPLS
Sbjct: 804 SGAVKQEKTEDGRRSACMLSSPESSLTPPLS 834
Score = 40 (19.1 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 26/89 (29%), Positives = 42/89 (47%)
Query: 150 GSEVSNGLNKKCLKRPSAMKPKVEPVEVLVTQSEGFGNESMSL---IEVEAIAEG--SA- 203
GS S G + + ++ SA K + V+V Q G E S ++ E +G SA
Sbjct: 764 GSRGSCGSSGRTAEK-SAHSFKSDQVKV--KQEPGTEEEICSFSGAVKQEKTEDGRRSAC 820
Query: 204 -LTSPKKNLELKMSKKISLNKKPMTVTEL 231
L+SP+ +L +S + L + T+T L
Sbjct: 821 MLSSPESSLTPPLSTNLHLESELDTLTGL 849
>UNIPROTKB|C9J9G2 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AC024267 HGNC:HGNC:20816
HOGENOM:HOG000220810 ChiTaRS:PHF12 IPI:IPI00952567
ProteinModelPortal:C9J9G2 STRING:C9J9G2 Ensembl:ENST00000378879
UCSC:uc002hdh.1 ArrayExpress:C9J9G2 Uniprot:C9J9G2
Length = 705
Score = 131 (51.2 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 33/82 (40%), Positives = 44/82 (53%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECAS--LSS--IPQGDWYCKYCQNMFERKRFLQH 658
N D C C +GG+LL CD CP AFH +C + LS +P G+W C C RK+ Q
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT--VRRKKREQK 112
Query: 659 DANAVEAGRVSGVDSVEQITKR 680
E G V+G+ V++ KR
Sbjct: 113 K----ELGHVNGL--VDKSGKR 128
Score = 67 (28.6 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 713 ILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC 746
++ CD C FH+ CL+ L +P G+W C
Sbjct: 286 LIQCDYCPLLFHMDCLEP----PLTAMPLGRWMC 315
>UNIPROTKB|Q9UPN9 [details] [associations]
symbol:TRIM33 "E3 ubiquitin-protein ligase TRIM33"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0008270 "zinc ion binding" evidence=NAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0017015
"regulation of transforming growth factor beta receptor signaling
pathway" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030514 "negative regulation of BMP signaling pathway"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070410 "co-SMAD
binding" evidence=IPI] [GO:0070412 "R-SMAD binding" evidence=IPI]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] Reactome:REACT_71
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 Pfam:PF13639 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00249 SMART:SM00297 SMART:SM00336
SMART:SM00502 UniPathway:UPA00143 EMBL:AF119043 Prosite:PS00518
Reactome:REACT_111102 GO:GO:0005654 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0000122 GO:GO:0007179 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0004842 GO:GO:0006367
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0030514 GO:GO:0017015
MIM:188550 Orphanet:146 PDB:3U5N PDB:3U5O PDB:3U5P PDBsum:3U5N
PDBsum:3U5O PDBsum:3U5P EMBL:AL390241 HOVERGEN:HBG054599
EMBL:AF220136 EMBL:AF220137 EMBL:AB029036 EMBL:AL035410
EMBL:AJ132948 IPI:IPI00010252 IPI:IPI00221114 RefSeq:NP_056990.3
RefSeq:NP_148980.2 UniGene:Hs.26837 PDB:3U5M PDBsum:3U5M
ProteinModelPortal:Q9UPN9 SMR:Q9UPN9 DIP:DIP-54262N IntAct:Q9UPN9
STRING:Q9UPN9 PhosphoSite:Q9UPN9 DMDM:12643365 PaxDb:Q9UPN9
PRIDE:Q9UPN9 Ensembl:ENST00000358465 Ensembl:ENST00000369543
GeneID:51592 KEGG:hsa:51592 UCSC:uc001eew.3 UCSC:uc001eex.3
CTD:51592 GeneCards:GC01M114935 H-InvDB:HIX0000910 HGNC:HGNC:16290
HPA:HPA004345 MIM:605769 neXtProt:NX_Q9UPN9 PharmGKB:PA38118
InParanoid:Q9UPN9 KO:K08883 OMA:PIRSLMH OrthoDB:EOG4SN1N0
PhylomeDB:Q9UPN9 ChiTaRS:TRIM33 GenomeRNAi:51592 NextBio:55433
PMAP-CutDB:Q9UPN9 ArrayExpress:Q9UPN9 Bgee:Q9UPN9 CleanEx:HS_TRIM33
Genevestigator:Q9UPN9 GermOnline:ENSG00000197323 Uniprot:Q9UPN9
Length = 1127
Score = 160 (61.4 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 37/116 (31%), Positives = 64/116 (55%)
Query: 585 LHQLAISLSKGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKEC--ASLSSIPQGDWY 642
+H+ A G N+D C +C +GG+LL C+ CP+ FH C +L S P GDW
Sbjct: 868 MHRSARIGGDGNNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWI 927
Query: 643 CKYCQNMFERKRFLQHDANAVE---AGRVS-GVDSVEQITKRCIRIVKNLEA-ELS 693
C +C+++ K +++D + ++ G+ + G+ V+Q ++C R++ L ELS
Sbjct: 928 CTFCRDI--GKPEVEYDCDNLQHSKKGKTAQGLSPVDQ--RKCERLLLYLYCHELS 979
Score = 42 (19.8 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 470 RQRKITKKSKKTVLISKPFENASPPLS 496
+Q K + ++S P + +PPLS
Sbjct: 793 KQEKTEDGRRSACMLSSPESSLTPPLS 819
>UNIPROTKB|F1MNE1 [details] [associations]
symbol:TRIM33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070412 "R-SMAD binding" evidence=IEA] [GO:0070410
"co-SMAD binding" evidence=IEA] [GO:0030514 "negative regulation of
BMP signaling pathway" evidence=IEA] [GO:0017015 "regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
Pfam:PF13639 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR017907
Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0030514 GO:GO:0017015
GeneTree:ENSGT00530000062982 CTD:51592 KO:K08883 OMA:PIRSLMH
EMBL:DAAA02007465 EMBL:DAAA02007466 EMBL:DAAA02007467
IPI:IPI00717094 RefSeq:NP_001192947.1 UniGene:Bt.91873
ProteinModelPortal:F1MNE1 PRIDE:F1MNE1 Ensembl:ENSBTAT00000001967
GeneID:533296 KEGG:bta:533296 NextBio:20875989 Uniprot:F1MNE1
Length = 1126
Score = 159 (61.0 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 37/116 (31%), Positives = 64/116 (55%)
Query: 585 LHQLAISLSKGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKEC--ASLSSIPQGDWY 642
+H+ A G N+D C +C +GG+LL C+ CP+ FH C +L S P GDW
Sbjct: 867 MHRSARIGGDGSSKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWI 926
Query: 643 CKYCQNMFERKRFLQHDANAVE---AGRVS-GVDSVEQITKRCIRIVKNLEA-ELS 693
C +C+++ K +++D + ++ G+ + G+ V+Q ++C R++ L ELS
Sbjct: 927 CTFCRDI--GKPEVEYDCDNLQHSKKGKTAQGLSPVDQ--RKCERLLLYLYCHELS 978
Score = 43 (20.2 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 466 SQSQRQRKITKKSKKTVLISKPFENASPPLS 496
S + +Q K + ++S P + +PPLS
Sbjct: 788 SGAVKQEKTEDGRRSACMLSSPESSLTPPLS 818
Score = 42 (19.8 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 176 EVLVTQSEGFGNESMSL---IEVEAIAEG--SA--LTSPKKNLELKMSKKISLNKKPMTV 228
+V V Q G +E S ++ E +G SA L+SP+ +L +S + L + T+
Sbjct: 771 QVKVKQEPGTEDEICSFSGAVKQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESELDTL 830
Query: 229 TEL 231
T L
Sbjct: 831 TSL 833
>FB|FBgn0023395 [details] [associations]
symbol:Chd3 "Chd3" species:7227 "Drosophila melanogaster"
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS;NAS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:AE014296 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0006333
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 GeneTree:ENSGT00560000076896
InterPro:IPR009463 Pfam:PF06465 EMBL:AY071503 EMBL:AF007780
RefSeq:NP_649111.1 ProteinModelPortal:O16102 SMR:O16102
DIP:DIP-21327N MINT:MINT-1651376 STRING:O16102 PaxDb:O16102
EnsemblMetazoa:FBtr0074998 GeneID:40111 KEGG:dme:Dmel_CG9594
UCSC:CG9594-RA CTD:1107 FlyBase:FBgn0023395 InParanoid:O16102
OMA:IKWRDLA OrthoDB:EOG4JH9WN PhylomeDB:O16102 GenomeRNAi:40111
NextBio:817050 Bgee:O16102 GermOnline:CG9594 Uniprot:O16102
Length = 892
Score = 149 (57.5 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYC 646
+++ C +C+DGG+LL CD CP +H+ C S L SIP+GDW C C
Sbjct: 34 DEEYCKVCSDGGDLLCCDSCPSVYHRTCLSPPLKSIPKGDWICPRC 79
>MGI|MGI:1924057 [details] [associations]
symbol:Phf12 "PHD finger protein 12" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0001106 "RNA
polymerase II transcription corepressor activity" evidence=ISO]
[GO:0001222 "transcription corepressor binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016580 "Sin3 complex" evidence=ISO]
[GO:0017053 "transcriptional repressor complex" evidence=ISO]
[GO:0035091 "phosphatidylinositol binding" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR008984
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00249 MGI:MGI:1924057 GO:GO:0017053 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 EMBL:AL669840 CTD:57649 eggNOG:NOG145066
HOGENOM:HOG000220810 HOVERGEN:HBG057884 OMA:MSSQAQG
OrthoDB:EOG4VHK63 ChiTaRS:PHF12 EMBL:AL845484 EMBL:BC043080
EMBL:AK129383 IPI:IPI00330525 IPI:IPI00515364 RefSeq:NP_777277.2
UniGene:Mm.274329 ProteinModelPortal:Q5SPL2 SMR:Q5SPL2
DIP:DIP-59633N PhosphoSite:Q5SPL2 PRIDE:Q5SPL2
Ensembl:ENSMUST00000049167 Ensembl:ENSMUST00000108360 GeneID:268448
KEGG:mmu:268448 GeneTree:ENSGT00440000033777 InParanoid:Q5SPL2
NextBio:392291 Bgee:Q5SPL2 CleanEx:MM_PHF12 Genevestigator:Q5SPL2
GermOnline:ENSMUSG00000037791 Uniprot:Q5SPL2
Length = 1003
Score = 134 (52.2 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 33/82 (40%), Positives = 45/82 (54%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECAS--LSS--IPQGDWYCKYCQNMFERKRFLQH 658
N D C C +GG+LL CD CP AFH +C + LS +P G+W C C RK+ Q
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT--VRRKKREQK 112
Query: 659 DANAVEAGRVSGVDSVEQITKR 680
E G V+G+ V++ +KR
Sbjct: 113 K----ELGHVNGL--VDKSSKR 128
Score = 67 (28.6 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 713 ILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC 746
++ CD C FH+ CL+ L +P G+W C
Sbjct: 286 LIQCDYCPLLFHMDCLEP----PLTAMPLGRWMC 315
>UNIPROTKB|F1PLN6 [details] [associations]
symbol:TRIM33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070412 "R-SMAD binding" evidence=IEA]
[GO:0070410 "co-SMAD binding" evidence=IEA] [GO:0030514 "negative
regulation of BMP signaling pathway" evidence=IEA] [GO:0017015
"regulation of transforming growth factor beta receptor signaling
pathway" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00184
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0030514
GO:GO:0017015 GeneTree:ENSGT00530000062982 OMA:PIRSLMH
EMBL:AAEX03010993 Ensembl:ENSCAFT00000015037 Uniprot:F1PLN6
Length = 995
Score = 157 (60.3 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 34/98 (34%), Positives = 59/98 (60%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKEC--ASLSSIPQGDWYCKYCQNMFERKRFLQHDA 660
N+D C +C +GG+LL C+ CP+ FH C +L S P GDW C +C+++ K +++D
Sbjct: 754 NEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDI--GKPEVEYDC 811
Query: 661 NAVE---AGRVS-GVDSVEQITKRCIRIVKNLEA-ELS 693
+ ++ G+ + G+ V+Q ++C R++ L ELS
Sbjct: 812 DNLQHSKKGKTAQGLSPVDQ--RKCERLLLYLYCHELS 847
Score = 43 (20.2 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 466 SQSQRQRKITKKSKKTVLISKPFENASPPLS 496
S + +Q K + ++S P + +PPLS
Sbjct: 657 SGAVKQEKTEDGRRSACMLSSPESSLTPPLS 687
>ZFIN|ZDB-GENE-030131-3876 [details] [associations]
symbol:phf12a "PHD finger protein 12a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR008984
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00249 ZFIN:ZDB-GENE-030131-3876 GO:GO:0046872 GO:GO:0008270
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GeneTree:ENSGT00440000033777
EMBL:CU694807 IPI:IPI00897047 RefSeq:XP_001919955.3
UniGene:Dr.79049 Ensembl:ENSDART00000111104 GeneID:562152
KEGG:dre:562152 CTD:562152 NextBio:20884273 Uniprot:E7EXI6
Length = 941
Score = 136 (52.9 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 26/56 (46%), Positives = 35/56 (62%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECAS--LSS--IPQGDWYCKYCQNMFERKR 654
N D+C C +GG+LL CD CP AFH +C + LS +P GDW C C + ++KR
Sbjct: 55 NHDICDSCREGGDLLCCDHCPAAFHLQCCNPPLSREMLPSGDWMCHRC-TVRKKKR 109
Score = 64 (27.6 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 22/69 (31%), Positives = 27/69 (39%)
Query: 685 VKNLEAELSGCLL-------CRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLR 737
VK + EL C L C C S P ++ CD C FH+ CL L
Sbjct: 265 VKRPQHELDSCGLVPLPVKVCYTCSRS-CRLAP--LIQCDFCPLLFHMDCLDP----PLT 317
Query: 738 ELPKGKWFC 746
P G+W C
Sbjct: 318 AFPTGRWMC 326
Score = 44 (20.5 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 16/51 (31%), Positives = 20/51 (39%)
Query: 701 CDFS-KSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDC 750
CDFS K P + LL + C KK + L +P K M C
Sbjct: 802 CDFSEKMSQSPSSNLLTKV--QNIIRRCRKKEQEDSLNSVPSAKEVTHMSC 850
Score = 39 (18.8 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 729 KKHKMADLRELPKGKWFCCMDCSRINSVLQNL 760
+KH A RE+ FC + + +N ++L
Sbjct: 715 RKHGEAQNREVQARASFCSVSGNAVNMCYRSL 746
>FB|FBgn0262519 [details] [associations]
symbol:Mi-2 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=IDA;NAS] [GO:0005634
"nucleus" evidence=ISS;IDA;NAS] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0016581 "NuRD complex" evidence=ISS;TAS]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS;IDA] [GO:0003678 "DNA
helicase activity" evidence=ISS] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0031491 "nucleosome binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0070615
"nucleosome-dependent ATPase activity" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 EMBL:AE014296 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0000122
GO:GO:0048813 GO:GO:0007517 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005700 GO:GO:0042766 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF119716 EMBL:AY113368 RefSeq:NP_001163476.1
RefSeq:NP_649154.2 UniGene:Dm.28317 ProteinModelPortal:O97159
SMR:O97159 DIP:DIP-22862N IntAct:O97159 MINT:MINT-864813
STRING:O97159 PaxDb:O97159 EnsemblMetazoa:FBtr0074919
EnsemblMetazoa:FBtr0302046 GeneID:40170 KEGG:dme:Dmel_CG8103
CTD:40170 FlyBase:FBgn0262519 InParanoid:O97159 OrthoDB:EOG4T76J4
ChiTaRS:Mi-2 GenomeRNAi:40170 NextBio:817384 Bgee:O97159
GermOnline:CG8103 Uniprot:O97159
Length = 1982
Score = 138 (53.6 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYC 646
++ + C +C DGG LL CD CP A+H C + L +IP GDW C C
Sbjct: 435 EHQEFCRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRC 481
Score = 134 (52.2 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 592 LSKGRQYP-GKDND----DLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCK 644
L K + +P G+D + D C +C GG ++ CD CPRA+H C L P+G W C
Sbjct: 360 LKKTKNFPEGEDGEHEHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCP 419
Query: 645 YCQ 647
+C+
Sbjct: 420 HCE 422
Score = 73 (30.8 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 26/103 (25%), Positives = 40/103 (38%)
Query: 698 CRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCSRINS 755
CR C K G G +L CD C +H CL L +P G W C C C +
Sbjct: 440 CRVC---KDG-GE--LLCCDSCPSAYHTFCLNP----PLDTIPDGDWRCPRC-SCPPLTG 488
Query: 756 VLQNLLVQEAEKLPEFHLNAIKKYAGNSLETVSDIDVRWRLLS 798
+ ++ + + K + NS V + ++W +S
Sbjct: 489 KAEKIITWRWAQRSNDDGPSTSKGSKNSNSRVREYFIKWHNMS 531
>TAIR|locus:2173179 [details] [associations]
symbol:AT5G13660 "AT5G13660" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 EMBL:AB006704 eggNOG:NOG12793
UniGene:At.32033 UniGene:At.66715 IPI:IPI00892118
RefSeq:NP_001119218.1 EnsemblPlants:AT5G13660.2 GeneID:831211
KEGG:ath:AT5G13660 TAIR:At5g13660 HOGENOM:HOG000064604 OMA:EQHANCK
PhylomeDB:B3H544 ProtClustDB:CLSN2702252 Genevestigator:B3H544
Uniprot:B3H544
Length = 537
Score = 145 (56.1 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 42/135 (31%), Positives = 63/135 (46%)
Query: 204 LTSPKKNLELKMSKKISLNKKPMTVTELFETGLLDGVSVVYMGGIKFQASXXXXXXXXXX 263
L PK + K +KK S N P V L TG+ DGV+V Y + Q +
Sbjct: 379 LLVPKIK-DTKTAKKGSTNTFPSNVKSLLSTGIFDGVTVKYYSWSREQRNLKGMIKGTGY 437
Query: 264 XXCSCSLCNGCRVIPPSKFEIHA-CKQYRRASQYICFENGKSLLEVLRACRSVPLPMLKA 322
C C C +V+ +FE HA CK + + +I FENGK++ V++ ++ P L
Sbjct: 438 L-CGCGNCKLNKVLNAYEFEQHANCKT-KHPNNHIYFENGKTIYGVVQELKNTPQEKLFD 495
Query: 323 TLQSALSSLPEEKSF 337
+Q+ S K+F
Sbjct: 496 AIQNVTGSDINHKNF 510
>UNIPROTKB|F1PT90 [details] [associations]
symbol:TRIM66 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 OMA:HMENERA EMBL:AAEX03012891
Ensembl:ENSCAFT00000011106 Uniprot:F1PT90
Length = 1374
Score = 154 (59.3 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 35/106 (33%), Positives = 57/106 (53%)
Query: 590 ISLSKGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKEC--ASLSSIPQGDWYCKYCQ 647
+ KG P +N+D C +C +GG LL CD CP+ FH C +L P GDW C C+
Sbjct: 1115 LGAKKGPPVP-IENEDFCAVCLNGGELLCCDRCPKVFHLSCHLPALLGFPGGDWVCTLCR 1173
Query: 648 NMFERKRFLQHDA-NA--VEAGR--VSGVDSVEQITKRCIRIVKNL 688
++ + + +++D NA + G G+ +Q K+C ++V +L
Sbjct: 1174 SLTQPE--MEYDCENARYYQPGMRDTPGLSIYDQ--KKCEKLVLSL 1215
Score = 48 (22.0 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 443 LTRNSSR--PGLIANSTPVTSVHKSSQSQRQRKITKKSKKTV--LISKPFENASPPLS 496
L R + R PGL+++S+ + S SQ + K+ +T+ L + P ++ PP S
Sbjct: 835 LVRGTPRTVPGLMSDSSQAITSLASDHSQARPKLMSGPTQTLPSLATCPLQSM-PPAS 891
Score = 48 (22.0 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 16/71 (22%), Positives = 35/71 (49%)
Query: 59 KRSRFSNSDDLLEDDVIDKRINSKIHEGRINK---VVKNVLNE--NGI---LESVVEEEN 110
K+S S +ED + + + + E +I V+ N LN+ NG+ LE + E
Sbjct: 258 KKSTLQTSAKQIEDRIFEVKHQHRKVENQIKMAKMVLMNELNKQANGLIEELEGITNERK 317
Query: 111 QLVQMTVENVI 121
+ ++ +++++
Sbjct: 318 RKLEQQLQSIM 328
Score = 38 (18.4 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 5/23 (21%), Positives = 18/23 (78%)
Query: 468 SQRQRKITKKSKKTVLISKPFEN 490
++R+RK+ ++ + +++++ FE+
Sbjct: 314 NERKRKLEQQLQSIMVLNRQFEH 336
>UNIPROTKB|F1NX04 [details] [associations]
symbol:PHF12 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001106
"RNA polymerase II transcription corepressor activity"
evidence=IEA] [GO:0001222 "transcription corepressor binding"
evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0035091
"phosphatidylinositol binding" evidence=IEA] InterPro:IPR000253
InterPro:IPR001965 InterPro:IPR008984 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016 SMART:SM00240
SMART:SM00249 GO:GO:0017053 GO:GO:0046872 GO:GO:0008270
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 OMA:MSSQAQG GeneTree:ENSGT00440000033777
EMBL:AADN02025853 IPI:IPI00589363 Ensembl:ENSGALT00000006417
Uniprot:F1NX04
Length = 1007
Score = 133 (51.9 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 33/82 (40%), Positives = 45/82 (54%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECAS--LSS--IPQGDWYCKYCQNMFERKRFLQH 658
N D C C +GG+LL CD CP AFH +C + LS +P G+W C C RK+ Q
Sbjct: 53 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT--VRRKKREQK 110
Query: 659 DANAVEAGRVSGVDSVEQITKR 680
E G+V+G+ V++ KR
Sbjct: 111 K----ELGQVNGL--VDKTGKR 126
Score = 67 (28.6 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 713 ILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC 746
++ CD C FH+ CL+ L +P G+W C
Sbjct: 282 LIQCDYCPLLFHMDCLEP----PLTAMPLGRWMC 311
>CGD|CAL0003038 [details] [associations]
symbol:orf19.6506 species:5476 "Candida albicans" [GO:0032221
"Rpd3S complex" evidence=IEA] [GO:0033698 "Rpd3L complex"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0060195 "negative
regulation of antisense RNA transcription" evidence=IEA]
[GO:0030174 "regulation of DNA-dependent DNA replication
initiation" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 CGD:CAL0003038 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AACQ01000020 EMBL:AACQ01000016
eggNOG:NOG145066 RefSeq:XP_720831.1 RefSeq:XP_721344.1
RefSeq:XP_888831.1 ProteinModelPortal:Q5AH34 GeneID:3637022
GeneID:3637451 GeneID:3703842 KEGG:cal:CaO19.13859
KEGG:cal:CaO19.6506 KEGG:cal:CaO19_6506 Uniprot:Q5AH34
Length = 688
Score = 126 (49.4 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 23/70 (32%), Positives = 35/70 (50%)
Query: 579 TSNGVSLHQLAISLSKGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSI 636
TSNG + Q + + K+NDD C C G + C+ CP++FH C +
Sbjct: 245 TSNGSIVKQEKDKHHEEEEEEVKENDDFCFACGMPGIFICCEKCPKSFHFTCCDPPIEEA 304
Query: 637 PQGDWYCKYC 646
P+ +WYC+ C
Sbjct: 305 PEDEWYCREC 314
Score = 70 (29.7 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 697 LCRGCDFSKSGFGPRTILLCDQCEREFHVGCL 728
LC C SG RT++ CD C +H+ CL
Sbjct: 411 LCHKC--GGSGLNRRTLIHCDYCPLVYHIDCL 440
>UNIPROTKB|Q2TAK2 [details] [associations]
symbol:PHF12 "PHF12 protein" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AC024267 UniGene:Hs.444173 HGNC:HGNC:20816
HOVERGEN:HBG057884 ChiTaRS:PHF12 IPI:IPI00952567 EMBL:BC110882
ProteinModelPortal:Q2TAK2 SMR:Q2TAK2 STRING:Q2TAK2
Ensembl:ENST00000577226 UCSC:uc002hdi.1 Bgee:Q2TAK2 Uniprot:Q2TAK2
Length = 849
Score = 131 (51.2 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 33/82 (40%), Positives = 44/82 (53%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECAS--LSS--IPQGDWYCKYCQNMFERKRFLQH 658
N D C C +GG+LL CD CP AFH +C + LS +P G+W C C RK+ Q
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT--VRRKKREQK 112
Query: 659 DANAVEAGRVSGVDSVEQITKR 680
E G V+G+ V++ KR
Sbjct: 113 K----ELGHVNGL--VDKSGKR 128
Score = 67 (28.6 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 713 ILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC 746
++ CD C FH+ CL+ L +P G+W C
Sbjct: 286 LIQCDYCPLLFHMDCLEP----PLTAMPLGRWMC 315
>UNIPROTKB|O43918 [details] [associations]
symbol:AIRE "Autoimmune regulator" species:9606 "Homo
sapiens" [GO:0045182 "translation regulator activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0042393 "histone binding" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0006955 "immune
response" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0015629 "actin cytoskeleton" evidence=IDA] InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00249 SMART:SM00258 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0006955 GO:GO:0006417
GO:GO:0046872 GO:GO:0015629 GO:GO:0008270 GO:GO:0045944
EMBL:CH471079 GO:GO:0006351 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AB006682 EMBL:AB006683 EMBL:AB006684
EMBL:AB006685 EMBL:Z97990 EMBL:AJ009610 EMBL:AP001754 EMBL:AP001060
EMBL:BC137268 EMBL:BC137270 IPI:IPI00015149 IPI:IPI00031178
IPI:IPI00031188 RefSeq:NP_000374.1 UniGene:Hs.129829 PDB:1XWH
PDB:2KE1 PDB:2KFT PDB:2LRI PDBsum:1XWH PDBsum:2KE1 PDBsum:2KFT
PDBsum:2LRI ProteinModelPortal:O43918 SMR:O43918 DIP:DIP-47504N
IntAct:O43918 MINT:MINT-6542056 STRING:O43918 PhosphoSite:O43918
PRIDE:O43918 Ensembl:ENST00000291582 Ensembl:ENST00000337909
Ensembl:ENST00000397994 Ensembl:ENST00000468282 GeneID:326
KEGG:hsa:326 UCSC:uc002zei.2 CTD:326 GeneCards:GC21P045705
HGNC:HGNC:360 HPA:HPA038267 MIM:109100 MIM:240300 MIM:607358
neXtProt:NX_O43918 Orphanet:3453 PharmGKB:PA24654 eggNOG:NOG317492
HOGENOM:HOG000060093 HOVERGEN:HBG014961 InParanoid:O43918 KO:K10603
OMA:NDDECAV OrthoDB:EOG4VX25M PhylomeDB:O43918
EvolutionaryTrace:O43918 GenomeRNAi:326 NextBio:1337
ArrayExpress:O43918 Bgee:O43918 CleanEx:HS_AIRE
Genevestigator:O43918 GermOnline:ENSG00000160224 GO:GO:0042393
GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763
Uniprot:O43918
Length = 545
Score = 154 (59.3 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 26/46 (56%), Positives = 29/46 (63%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYC 646
N+D C +C DGG L+ CDGCPRAFH C S L IP G W C C
Sbjct: 295 NEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSC 340
Score = 38 (18.4 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 13/39 (33%), Positives = 14/39 (35%)
Query: 713 ILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCS 751
+L C C FH C H A P G C CS
Sbjct: 443 VLRCTHCAAAFHWRC---HFPAGTSR-P-GTGLRCRSCS 476
>UNIPROTKB|D4AB82 [details] [associations]
symbol:Trim24 "Protein Trim24" species:10116 "Rattus
norvegicus" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 RGD:1560596
Prosite:PS00518 GO:GO:0005737 GO:GO:0045892 GO:GO:0045893
GO:GO:0008285 GO:GO:0042981 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0046777 GO:GO:0003682 GO:GO:0004672
GO:GO:0031647 GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 GO:GO:0055074
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071391 GO:GO:0034056
GO:GO:0070562 GO:GO:0005726 OrthoDB:EOG4P8FH9 IPI:IPI00566577
Ensembl:ENSRNOT00000017848 ArrayExpress:D4AB82 Uniprot:D4AB82
Length = 1048
Score = 148 (57.2 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 29/90 (32%), Positives = 51/90 (56%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKEC--ASLSSIPQGDWYCKYCQNMFERKRFLQHDA 660
N+D C +C +GG LL C+ CP+ FH C +L+ P G+W C +C+++ K +++D
Sbjct: 824 NEDWCAVCQNGGELLCCEKCPKVFHLTCHVPTLTHFPSGEWICTFCRDL--SKPEVEYDC 881
Query: 661 NAV----EAGRVSGVDSVEQITKR-CIRIV 685
+A + + G+ + I KR C R++
Sbjct: 882 DAPSHNSDKRKSEGLTKLTPIDKRKCERLL 911
>UNIPROTKB|H0Y9U6 [details] [associations]
symbol:WHSC1 "Histone-lysine N-methyltransferase NSD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 EMBL:AL132868 EMBL:AC105448
HGNC:HGNC:12766 ChiTaRS:WHSC1 Ensembl:ENST00000514329
Uniprot:H0Y9U6
Length = 284
Score = 139 (54.0 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 594 KGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQ 647
KG+++ N C +C+ GG+LL C+ CP AFH +C ++ +P G W+C C+
Sbjct: 145 KGKRHHAHVNVSWCFVCSKGGSLLCCESCPAAFHPDCLNIE-MPDGSWFCNDCR 197
Score = 107 (42.7 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 28/95 (29%), Positives = 43/95 (45%)
Query: 553 NSEVSPSQFEAHAGWSSRRKPYAHIYTSNGVSLHQLAISLSKGRQYPGKDNDDLCTICAD 612
+S S S E S +P Y S + ++++S K + + +C +C
Sbjct: 29 SSSPSASLTENEVSDSPGDEPSESPYESADETQTEVSVSSKKSERGVTAKKEYVCQLCEK 88
Query: 613 GGNLLPCDG-CPRAFHKECASLSSIPQGDWYCKYC 646
G+LL C+G C AFH C LS P+G + C C
Sbjct: 89 PGSLLLCEGPCCGAFHLACLGLSRRPEGRFTCSEC 123
Score = 77 (32.2 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 21/59 (35%), Positives = 27/59 (45%)
Query: 692 LSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDC 750
+S C +C SK G ++L C+ C FH CL E+P G WFC DC
Sbjct: 155 VSWCFVC-----SKGG----SLLCCESCPAAFHPDCLNI-------EMPDGSWFC-NDC 196
>RGD|1311139 [details] [associations]
symbol:Aire "autoimmune regulator" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006959 "humoral immune response"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA;ISO] [GO:0015629 "actin
cytoskeleton" evidence=IEA;ISO] [GO:0042393 "histone binding"
evidence=IEA;ISO] [GO:0042802 "identical protein binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045182 "translation regulator
activity" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000770 InterPro:IPR001965 InterPro:IPR004865
InterPro:IPR008087 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342
Pfam:PF03172 PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864
PROSITE:PS51414 SMART:SM00249 SMART:SM00258 RGD:1311139
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0006417
GO:GO:0046872 GO:GO:0015629 GO:GO:0008270 GO:GO:0045944
GO:GO:0003682 GO:GO:0045182 GO:GO:0044212 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 OMA:NDDECAV OrthoDB:EOG4VX25M
GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763
GeneTree:ENSGT00440000034278 IPI:IPI00360526
Ensembl:ENSRNOT00000001611 UCSC:RGD:1311139 Uniprot:D3ZV49
Length = 551
Score = 151 (58.2 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 26/46 (56%), Positives = 29/46 (63%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYC 646
N+D C +C DGG L+ CDGCPRAFH C S L IP G W C C
Sbjct: 297 NEDECAVCHDGGELICCDGCPRAFHLACLSPPLQEIPSGLWRCSCC 342
Score = 41 (19.5 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 14/39 (35%), Positives = 16/39 (41%)
Query: 713 ILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCS 751
+L C C FH C MA +R P G C CS
Sbjct: 443 VLRCAHCAAAFHWRC--HFPMAAVR--P-GTNLRCKSCS 476
Score = 40 (19.1 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 8/22 (36%), Positives = 9/22 (40%)
Query: 701 CDFSKSGFGPRTILLCDQCERE 722
C F + P T L C C E
Sbjct: 457 CHFPMAAVRPGTNLRCKSCSAE 478
>UNIPROTKB|E2QYC0 [details] [associations]
symbol:PHF12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 OMA:MSSQAQG
GeneTree:ENSGT00440000033777 EMBL:AAEX03006672
Ensembl:ENSCAFT00000029911 Uniprot:E2QYC0
Length = 910
Score = 131 (51.2 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 33/82 (40%), Positives = 44/82 (53%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECAS--LSS--IPQGDWYCKYCQNMFERKRFLQH 658
N D C C +GG+LL CD CP AFH +C + LS +P G+W C C RK+ Q
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT--VRRKKREQK 112
Query: 659 DANAVEAGRVSGVDSVEQITKR 680
E G V+G+ V++ KR
Sbjct: 113 K----ELGHVNGL--VDKSGKR 128
Score = 67 (28.6 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 713 ILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC 746
++ CD C FH+ CL+ L +P G+W C
Sbjct: 286 LIQCDYCPLLFHMDCLEP----PLTAMPLGRWMC 315
>UNIPROTKB|K7EQP5 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AC024267 HGNC:HGNC:20816
Ensembl:ENST00000583747 Uniprot:K7EQP5
Length = 117
Score = 120 (47.3 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 22/45 (48%), Positives = 28/45 (62%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECAS--LSS--IPQGDWYC 643
N D C C +GG+LL CD CP AFH +C + LS +P G+W C
Sbjct: 73 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMC 117
>UNIPROTKB|F1PPM4 [details] [associations]
symbol:AIRE "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00249 SMART:SM00258 GO:GO:0005634 GO:GO:0005737
GO:GO:0006417 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0045182 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:NDDECAV GO:GO:0006959 Gene3D:3.10.390.10
InterPro:IPR010919 SUPFAM:SSF63763 GeneTree:ENSGT00440000034278
EMBL:AAEX03016632 Ensembl:ENSCAFT00000017065 Uniprot:F1PPM4
Length = 547
Score = 154 (59.3 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 26/46 (56%), Positives = 29/46 (63%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYC 646
N+D C +C DGG L+ CDGCPRAFH C S L IP G W C C
Sbjct: 295 NEDECAVCRDGGELICCDGCPRAFHLACLSPPLHDIPSGTWRCSSC 340
Score = 37 (18.1 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 6/15 (40%), Positives = 7/15 (46%)
Query: 713 ILLCDQCEREFHVGC 727
+L C C FH C
Sbjct: 441 VLRCTHCAAAFHWRC 455
>MGI|MGI:109275 [details] [associations]
symbol:Trim24 "tripartite motif-containing 24" species:10090
"Mus musculus" [GO:0002039 "p53 binding" evidence=ISO;IPI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=ISO;IDA] [GO:0003713 "transcription coactivator
activity" evidence=ISO;IDA] [GO:0004672 "protein kinase activity"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin" evidence=IDA]
[GO:0005726 "perichromatin fibrils" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=ISO] [GO:0008285 "negative
regulation of cell proliferation" evidence=IGI;IMP] [GO:0010628
"positive regulation of gene expression" evidence=IGI;IMP]
[GO:0016567 "protein ubiquitination" evidence=ISO;IDA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0016922 "ligand-dependent
nuclear receptor binding" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=ISO;IMP] [GO:0031647 "regulation of
protein stability" evidence=ISO;IMP] [GO:0034056 "estrogen response
element binding" evidence=ISO] [GO:0042981 "regulation of apoptotic
process" evidence=ISO;IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IGI]
[GO:0046777 "protein autophosphorylation" evidence=IDA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IMP] [GO:0070562 "regulation of vitamin D
receptor signaling pathway" evidence=IMP] [GO:0070577 "histone
acetyl-lysine binding" evidence=ISO] [GO:0071391 "cellular response
to estrogen stimulus" evidence=ISO] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 UniPathway:UPA00143
MGI:MGI:109275 Prosite:PS00518 GO:GO:0005737 GO:GO:0045892
GO:GO:0045893 GO:GO:0008285 GO:GO:0042981 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0046777 GO:GO:0006351
GO:GO:0003682 GO:GO:0004672 GO:GO:0031647 GO:GO:0003713
GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 GO:GO:0055074
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359
GO:GO:0016922 GO:GO:0071391 GO:GO:0034056 GO:GO:0070562
GO:GO:0005726 CTD:8805 HOGENOM:HOG000252971 HOVERGEN:HBG054599
KO:K08881 OMA:FWAQNIF OrthoDB:EOG4P8FH9 ChiTaRS:TRIM24 EMBL:S78221
EMBL:S78219 EMBL:BC056959 IPI:IPI00131130 IPI:IPI00227778
PIR:S55259 RefSeq:NP_001258993.1 RefSeq:NP_659542.3
UniGene:Mm.41063 ProteinModelPortal:Q64127 SMR:Q64127
DIP:DIP-31476N IntAct:Q64127 STRING:Q64127 PhosphoSite:Q64127
PaxDb:Q64127 PRIDE:Q64127 Ensembl:ENSMUST00000031859
Ensembl:ENSMUST00000120428 GeneID:21848 KEGG:mmu:21848
UCSC:uc009bjk.1 UCSC:uc009bjl.1 GeneTree:ENSGT00530000062982
InParanoid:Q64127 NextBio:301326 Bgee:Q64127 CleanEx:MM_TRIM24
Genevestigator:Q64127 GermOnline:ENSMUSG00000029833 Uniprot:Q64127
Length = 1051
Score = 147 (56.8 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 28/88 (31%), Positives = 50/88 (56%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKEC--ASLSSIPQGDWYCKYCQNMFERKRFLQHD- 659
N+D C +C +GG LL C+ CP+ FH C +L++ P G+W C +C+++ + + D
Sbjct: 826 NEDWCAVCQNGGELLCCEKCPKVFHLTCHVPTLTNFPSGEWICTFCRDLSKPEVDYDCDV 885
Query: 660 -ANAVEAGRVSGVDSVEQITKR-CIRIV 685
++ E + G+ + I KR C R++
Sbjct: 886 PSHHSEKRKSEGLTKLTPIDKRKCERLL 913
>UNIPROTKB|H7C2H0 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000953 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50013 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00298 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR023780 HGNC:HGNC:1918 ChiTaRS:CHD3 EMBL:AC104581
GO:GO:0016818 Ensembl:ENST00000452447 Uniprot:H7C2H0
Length = 525
Score = 143 (55.4 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 33/109 (30%), Positives = 47/109 (43%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQNMFERKRFLQHD 659
D+ D C +C GG ++ CD CPRA+H C L P+G W C +C+ + + +
Sbjct: 248 DHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQWEAKEEE 307
Query: 660 ANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGF 708
E G G E R+ K+ G LLC CD S +
Sbjct: 308 EEYEEEGEEEGEKEEEDDHMEYCRVCKD-----GGELLC--CDACISSY 349
Score = 123 (48.4 bits), Expect = 0.00058, P = 0.00058
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 594 KGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYC 646
+G + D+ + C +C DGG LL CD C ++H C + L IP G+W C C
Sbjct: 317 EGEKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRC 371
>ZFIN|ZDB-GENE-030131-5913 [details] [associations]
symbol:trim24 "tripartite motif-containing 24"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 Prosite:PS00518
ZFIN:ZDB-GENE-030131-5913 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AY598454
IPI:IPI00483547 UniGene:Dr.16482 ProteinModelPortal:Q6E2N2
SMR:Q6E2N2 HOVERGEN:HBG097569 ArrayExpress:Q6E2N2 Uniprot:Q6E2N2
Length = 961
Score = 158 (60.7 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 31/93 (33%), Positives = 50/93 (53%)
Query: 575 AHIYTSNGVSLHQLAISLSKGRQYPGKD---NDDLCTICADGGNLLPCDGCPRAFHKEC- 630
A + S GV + + + P D N+D C +C +GG L+ CD CP+ FH C
Sbjct: 665 ASLPDSTGVQSQSVQPGEQQSEKTPEADEDPNEDWCAVCQNGGELICCDKCPKVFHLSCH 724
Query: 631 -ASLSSIPQGDWYCKYCQNMFERKRFLQHDANA 662
SL++ P G+WYC C+++ + +Q++ NA
Sbjct: 725 VPSLTASPSGEWYCTLCRDLNSPE--MQYNVNA 755
Score = 39 (18.8 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 315 VPLPMLKATLQSALSSLPE-EKSFACVRCKGTFPITCV 351
VP ++ + Q +S E S CV C +TC+
Sbjct: 122 VPSSTMEKSCQLCMSCDDNTEASGFCVECVEFLCVTCI 159
>UNIPROTKB|F1P4C7 [details] [associations]
symbol:TRIM24 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0002039 "p53 binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0031647 "regulation
of protein stability" evidence=IEA] [GO:0034056 "estrogen response
element binding" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IEA] [GO:0070562 "regulation of vitamin D
receptor signaling pathway" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IEA] [GO:0071391 "cellular response
to estrogen stimulus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=ISS] InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 GO:GO:0005737
GO:GO:0045892 GO:GO:0045893 GO:GO:0008285 GO:GO:0042981
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0046777
GO:GO:0003682 GO:GO:0004672 GO:GO:0031647 GO:GO:0030163
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0005719
GO:GO:0004842 GO:GO:0055074 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0016922 GO:GO:0071391
GO:GO:0034056 GO:GO:0070562 GO:GO:0005726 OMA:FWAQNIF
GeneTree:ENSGT00530000062982 EMBL:AADN02006351 EMBL:AADN02006352
IPI:IPI00591737 Ensembl:ENSGALT00000020916 Uniprot:F1P4C7
Length = 928
Score = 146 (56.5 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKEC--ASLSSIPQGDWYCKYCQNM 649
N+D C +C +GG LL C+ CP+ FH C SL S P G+W C +C+++
Sbjct: 703 NEDWCAVCQNGGELLCCEKCPKVFHLSCHVPSLMSFPSGEWICTFCRDL 751
>UNIPROTKB|E1B7A1 [details] [associations]
symbol:PHF12 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035091 "phosphatidylinositol binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0016580 "Sin3 complex" evidence=IEA] [GO:0001222 "transcription
corepressor binding" evidence=IEA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000253 InterPro:IPR001965
InterPro:IPR008984 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006
PROSITE:PS50016 SMART:SM00249 GO:GO:0017053 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 CTD:57649 OMA:MSSQAQG GeneTree:ENSGT00440000033777
EMBL:DAAA02048610 IPI:IPI00688031 RefSeq:NP_001179060.1
UniGene:Bt.52047 PRIDE:E1B7A1 Ensembl:ENSBTAT00000021255
GeneID:507057 KEGG:bta:507057 NextBio:20867881 Uniprot:E1B7A1
Length = 1004
Score = 131 (51.2 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 33/82 (40%), Positives = 44/82 (53%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECAS--LSS--IPQGDWYCKYCQNMFERKRFLQH 658
N D C C +GG+LL CD CP AFH +C + LS +P G+W C C RK+ Q
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT--VRRKKREQK 112
Query: 659 DANAVEAGRVSGVDSVEQITKR 680
E G V+G+ V++ KR
Sbjct: 113 K----ELGHVNGL--VDKSGKR 128
Score = 67 (28.6 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 713 ILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC 746
++ CD C FH+ CL+ L +P G+W C
Sbjct: 286 LIQCDYCPLLFHMDCLEP----PLTAMPLGRWMC 315
>UNIPROTKB|Q96QT6 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001222
"transcription corepressor binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0035091 "phosphatidylinositol binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0001106 "RNA
polymerase II transcription corepressor activity" evidence=IDA]
[GO:0016580 "Sin3 complex" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000253 InterPro:IPR001965
InterPro:IPR008984 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006
PROSITE:PS50016 SMART:SM00249 GO:GO:0017053 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 EMBL:CH471159
GO:GO:0001106 GO:GO:0016580 PDB:2LKM PDBsum:2LKM EMBL:AY030283
EMBL:AK024290 EMBL:AK160370 EMBL:BC001657 EMBL:BC121044
EMBL:AB040956 IPI:IPI00290033 IPI:IPI00292750 IPI:IPI00441976
IPI:IPI00607816 RefSeq:NP_001028733.1 RefSeq:NP_065940.1
UniGene:Hs.444173 PDB:2L9S PDBsum:2L9S ProteinModelPortal:Q96QT6
SMR:Q96QT6 DIP:DIP-59632N IntAct:Q96QT6 STRING:Q96QT6
PhosphoSite:Q96QT6 DMDM:71153050 PaxDb:Q96QT6 PRIDE:Q96QT6
Ensembl:ENST00000268756 Ensembl:ENST00000332830 GeneID:57649
KEGG:hsa:57649 UCSC:uc002hdg.1 UCSC:uc002hdj.1 CTD:57649
GeneCards:GC17M027232 H-InvDB:HIX0202392 HGNC:HGNC:20816
HPA:HPA021410 neXtProt:NX_Q96QT6 PharmGKB:PA134954478
eggNOG:NOG145066 HOGENOM:HOG000220810 HOVERGEN:HBG057884
InParanoid:Q96QT6 OMA:MSSQAQG OrthoDB:EOG4VHK63 ChiTaRS:PHF12
EvolutionaryTrace:Q96QT6 GenomeRNAi:57649 NextBio:64390
ArrayExpress:Q96QT6 Bgee:Q96QT6 CleanEx:HS_PHF12
Genevestigator:Q96QT6 GermOnline:ENSG00000109118 Uniprot:Q96QT6
Length = 1004
Score = 131 (51.2 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 33/82 (40%), Positives = 44/82 (53%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECAS--LSS--IPQGDWYCKYCQNMFERKRFLQH 658
N D C C +GG+LL CD CP AFH +C + LS +P G+W C C RK+ Q
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT--VRRKKREQK 112
Query: 659 DANAVEAGRVSGVDSVEQITKR 680
E G V+G+ V++ KR
Sbjct: 113 K----ELGHVNGL--VDKSGKR 128
Score = 67 (28.6 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 713 ILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC 746
++ CD C FH+ CL+ L +P G+W C
Sbjct: 286 LIQCDYCPLLFHMDCLEP----PLTAMPLGRWMC 315
>UNIPROTKB|F1RNA4 [details] [associations]
symbol:PHF12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035091 "phosphatidylinositol binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0016580 "Sin3 complex" evidence=IEA] [GO:0001222 "transcription
corepressor binding" evidence=IEA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000253 InterPro:IPR001965
InterPro:IPR008984 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006
PROSITE:PS50016 SMART:SM00249 GO:GO:0017053 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 CTD:57649 OMA:MSSQAQG GeneTree:ENSGT00440000033777
EMBL:FP236132 RefSeq:XP_003131823.2 UniGene:Ssc.50204
Ensembl:ENSSSCT00000019351 GeneID:100515341 KEGG:ssc:100515341
Uniprot:F1RNA4
Length = 1004
Score = 131 (51.2 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 33/82 (40%), Positives = 44/82 (53%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECAS--LSS--IPQGDWYCKYCQNMFERKRFLQH 658
N D C C +GG+LL CD CP AFH +C + LS +P G+W C C RK+ Q
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT--VRRKKREQK 112
Query: 659 DANAVEAGRVSGVDSVEQITKR 680
E G V+G+ V++ KR
Sbjct: 113 K----ELGHVNGL--VDKSGKR 128
Score = 67 (28.6 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 713 ILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC 746
++ CD C FH+ CL+ L +P G+W C
Sbjct: 286 LIQCDYCPLLFHMDCLEP----PLTAMPLGRWMC 315
>UNIPROTKB|E9PTL0 [details] [associations]
symbol:Zmynd8 "Protein Zmynd8" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
IPI:IPI00769023 Ensembl:ENSRNOT00000055139 RGD:1309544
ArrayExpress:E9PTL0 Uniprot:E9PTL0
Length = 1073
Score = 146 (56.5 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 32/92 (34%), Positives = 50/92 (54%)
Query: 568 SSRRKPYAHIYTSNGVSLHQLAISLSKGRQYPG------KD----NDDLCTICADGGNLL 617
+ +RK + ++SNG S + S K ++ PG KD ND C +C G +L
Sbjct: 17 AQKRKVPSPPHSSNGHSPQDSSTSPIKKKKKPGLLNSSSKDQDGRNDFYCWVCHREGQVL 76
Query: 618 PCDGCPRAFHKECASLSSIPQGDWYCKYCQNM 649
C+ CPR +H +C L+S P+GDW+C C+ +
Sbjct: 77 CCELCPRVYHAKCLRLTSEPEGDWFCPECEKI 108
>TAIR|locus:2195945 [details] [associations]
symbol:AT1G77250 "AT1G77250" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 EMBL:BT025330
IPI:IPI00544228 RefSeq:NP_177849.2 UniGene:At.50042
ProteinModelPortal:Q1JPM3 SMR:Q1JPM3 PaxDb:Q1JPM3 PRIDE:Q1JPM3
EnsemblPlants:AT1G77250.1 GeneID:844061 KEGG:ath:AT1G77250
TAIR:At1g77250 eggNOG:NOG147697 HOGENOM:HOG000090483
InParanoid:Q1JPM3 OMA:CQHAFLN PhylomeDB:Q1JPM3
Genevestigator:Q1JPM3 Uniprot:Q1JPM3
Length = 522
Score = 104 (41.7 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 31/105 (29%), Positives = 50/105 (47%)
Query: 677 ITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADL 736
+T R I++ + S CL CR C K I+LCD C+ +H+ C++
Sbjct: 386 LTSRQIKL-HGVRWYCSSCL-CRNCLTDKDD---DKIVLCDGCDDAYHIYCMRP----PC 436
Query: 737 RELPKGKWFCCMDCSRINSVLQNLLVQEAEKLPEFHLNAIKKYAG 781
+P G+WFC C ++L+ VQ+A K E + ++K G
Sbjct: 437 ESVPNGEWFCTA-CKA--AILK---VQKARKAFEKKMETVQKQKG 475
Score = 83 (34.3 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 605 DLCTIC---ADGGNLLPCDGCPRAFHKECASLSS--IPQGDWYCKYC 646
D+C +C A+ + L CD C +H CA +P WYC C
Sbjct: 241 DICKLCGEKAEARDCLACDHCEDMYHVSCAQPGGKGMPTHSWYCLDC 287
Score = 47 (21.6 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 18/80 (22%), Positives = 31/80 (38%)
Query: 9 LAGSLDETSTQSLPQAGIQASDCVKAACENVRCKRFKVTKVNGFIVYSRVKRSRFSNS-- 66
L G L + + + P + + V A C++V V F +R+
Sbjct: 99 LTGELPKPPSPNKPSSESTNHETVTAGCQHVLSH---VLASKEFASLNRLLSENLQGVKI 155
Query: 67 DDLLEDDVIDKRINSKIHEG 86
DD +ID R+ ++EG
Sbjct: 156 DDFTSRTLIDTRMKEGVYEG 175
>UNIPROTKB|B5MCJ9 [details] [associations]
symbol:TRIM66 "Tripartite motif-containing protein 66"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010369 "chromocenter" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0016235 "aggresome" evidence=IDA]
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
GO:GO:0005634 GO:GO:0045892 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016235
Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0010369 EMBL:AC091053
EMBL:AC104360 IPI:IPI00941834 HGNC:HGNC:29005 HOGENOM:HOG000074104
HOVERGEN:HBG057849 ProteinModelPortal:B5MCJ9 SMR:B5MCJ9
STRING:B5MCJ9 PRIDE:B5MCJ9 Ensembl:ENST00000402157 OMA:HMENERA
OrthoDB:EOG42V8FR ArrayExpress:B5MCJ9 Bgee:B5MCJ9 Uniprot:B5MCJ9
Length = 1245
Score = 157 (60.3 bits), Expect = 5.5e-06, Sum P(3) = 5.5e-06
Identities = 37/102 (36%), Positives = 59/102 (57%)
Query: 594 KGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKEC--ASLSSIPQGDWYCKYCQNMFE 651
KG P +N+D C +C +GG LL CD CP+ FH C +L S P G+W C C+++ +
Sbjct: 990 KGPPAP-IENEDFCAVCLNGGELLCCDRCPKVFHLSCHVPALLSFPGGEWVCTLCRSLTQ 1048
Query: 652 RKRFLQHDA-NAV--EAG-RVS-GVDSVEQITKRCIRIVKNL 688
+ +++D NA + G R S G+ +Q K+C ++V +L
Sbjct: 1049 PE--MEYDCENACYNQPGMRASPGLSMYDQ--KKCEKLVLSL 1086
Score = 48 (22.0 bits), Expect = 5.5e-06, Sum P(3) = 5.5e-06
Identities = 16/71 (22%), Positives = 35/71 (49%)
Query: 59 KRSRFSNSDDLLEDDVIDKRINSKIHEGRINK---VVKNVLNE--NGI---LESVVEEEN 110
K+S S +ED + + + + E +I V+ N LN+ NG+ LE + E
Sbjct: 120 KKSSLQTSAKQIEDRIFEVKHQHRKVENQIKMAKMVLMNELNKQANGLIEELEGITNERK 179
Query: 111 QLVQMTVENVI 121
+ ++ +++++
Sbjct: 180 RKLEQQLQSIM 190
Score = 40 (19.1 bits), Expect = 5.5e-06, Sum P(3) = 5.5e-06
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 317 LPMLKATLQ-SALSSLPEEKSFAC 339
+P +LQ SAL LP EK AC
Sbjct: 352 VPQQLGSLQCSAL--LPREKELAC 373
Score = 38 (18.4 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 5/23 (21%), Positives = 18/23 (78%)
Query: 468 SQRQRKITKKSKKTVLISKPFEN 490
++R+RK+ ++ + +++++ FE+
Sbjct: 176 NERKRKLEQQLQSIMVLNRQFEH 198
Score = 37 (18.1 bits), Expect = 6.8e-05, Sum P(3) = 6.8e-05
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 133 CKEE----PISKVECFPRKEGGSEVSNG 156
C EE P+ FPR + GS NG
Sbjct: 29 CTEEHRHSPVPGGPFFPRAQKGSPGVNG 56
>SGD|S000004680 [details] [associations]
symbol:RCO1 "Essential subunit of the histone deacetylase
Rpd3S complex" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0060195 "negative regulation of
antisense RNA transcription" evidence=IMP] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0033698 "Rpd3L complex" evidence=IDA] [GO:0016575
"histone deacetylation" evidence=IMP] [GO:0032221 "Rpd3S complex"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0030174 "regulation of DNA-dependent DNA
replication initiation" evidence=IMP] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=IGI]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
SGD:S000004680 GO:GO:0046872 GO:GO:0008270 EMBL:Z48952
EMBL:BK006946 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006368 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0033698 GO:GO:0016575 GO:GO:0030174
GO:GO:0032221 GO:GO:0060195 eggNOG:NOG145066
GeneTree:ENSGT00440000033777 PIR:S52835 RefSeq:NP_013791.1
ProteinModelPortal:Q04779 SMR:Q04779 DIP:DIP-1959N IntAct:Q04779
MINT:MINT-497703 STRING:Q04779 PaxDb:Q04779 PeptideAtlas:Q04779
EnsemblFungi:YMR075W GeneID:855097 KEGG:sce:YMR075W CYGD:YMR075w
HOGENOM:HOG000066043 OMA:FLCCDTC OrthoDB:EOG4TQQJV NextBio:978414
Genevestigator:Q04779 GermOnline:YMR075W Uniprot:Q04779
Length = 684
Score = 124 (48.7 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKECASL----SSIPQGDWYCKYCQ 647
+N+D C+ C G+ L CD CP++FH C +++P+GDW+C C+
Sbjct: 258 ENEDFCSACNQSGSFLCCDTCPKSFHFLCLDPPIDPNNLPKGDWHCNECK 307
Score = 65 (27.9 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 16/56 (28%), Positives = 27/56 (48%)
Query: 696 LLCRGCDFSKSGF-----GPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC 746
L+C C+ ++ G R I+ CD C+ +H+ C+ + A + L KW C
Sbjct: 415 LICYKCNQTRLGSWSHPENSRLIMTCDYCQTPWHLDCVPR---ASFKNLGS-KWKC 466
Score = 48 (22.0 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 28/83 (33%), Positives = 38/83 (45%)
Query: 154 SNGLNKKCLKRPSAMKPKVEPVEVLVTQSEG----FGNESMSLIEVEAIAEGSALTSPKK 209
S+ KK KR S+ + + SEG F NE +L + I E PK+
Sbjct: 28 SSSKEKKRPKRLSSQNVNYDLKRRKIITSEGIERSFKNEHSNLAVEDNIPE----EEPKE 83
Query: 210 NLELKMSKK--ISLNKKPMTVTE 230
LE K SK I LN+ P T++E
Sbjct: 84 LLE-KDSKGNIIKLNE-PSTISE 104
Score = 37 (18.1 bits), Expect = 7.0e-05, Sum P(3) = 7.0e-05
Identities = 9/33 (27%), Positives = 20/33 (60%)
Query: 445 RNSSRPGLIANSTPVTSVHKSSQSQRQRKITKK 477
++++R +NS+ +S SS S +++K K+
Sbjct: 6 KDTTRSPSHSNSSSPSSSSLSSSSSKEKKRPKR 38
>UNIPROTKB|Q96L73 [details] [associations]
symbol:NSD1 "Histone-lysine N-methyltransferase, H3
lysine-36 and H4 lysine-20 specific" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001702 "gastrulation with mouth forming second" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0016571 "histone methylation" evidence=ISS] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=ISS]
[GO:0042799 "histone methyltransferase activity (H4-K20 specific)"
evidence=ISS] [GO:0042974 "retinoic acid receptor binding"
evidence=ISS] [GO:0046965 "retinoid X receptor binding"
evidence=ISS] [GO:0046966 "thyroid hormone receptor binding"
evidence=ISS] [GO:0046975 "histone methyltransferase activity
(H3-K36 specific)" evidence=ISS;IDA] [GO:0050681 "androgen receptor
binding" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0003712
"transcription cofactor activity" evidence=IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0030331 "estrogen receptor binding"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0010452 "histone H3-K36 methylation" evidence=ISS;IDA]
[GO:0034770 "histone H4-K20 methylation" evidence=ISS]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 GO:GO:0005634 GO:GO:0003714 GO:GO:0005694
GO:GO:0045893 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0050681 GO:GO:0030331
GO:GO:0046966 eggNOG:COG2940 InterPro:IPR003616 SMART:SM00508
PROSITE:PS50868 GO:GO:0042799 InterPro:IPR000313 PROSITE:PS50812
GO:GO:0016922 GO:GO:0046965 SMART:SM00293 GO:GO:0046975 MIM:130650
Orphanet:3447 Orphanet:821 EMBL:AF380302 EMBL:AY049721
EMBL:AF395588 EMBL:AF322907 IPI:IPI00102107 IPI:IPI00173901
IPI:IPI00332367 RefSeq:NP_071900.2 RefSeq:NP_758859.1
UniGene:Hs.106861 PDB:3OOI PDBsum:3OOI ProteinModelPortal:Q96L73
SMR:Q96L73 DIP:DIP-58517N IntAct:Q96L73 STRING:Q96L73
PhosphoSite:Q96L73 DMDM:32469769 PaxDb:Q96L73 PRIDE:Q96L73
Ensembl:ENST00000347982 Ensembl:ENST00000354179
Ensembl:ENST00000361032 Ensembl:ENST00000439151 GeneID:64324
KEGG:hsa:64324 UCSC:uc003mfr.4 UCSC:uc003mfs.1 UCSC:uc003mft.4
CTD:64324 GeneCards:GC05P176560 HGNC:HGNC:14234 MIM:117550
MIM:277590 MIM:606681 neXtProt:NX_Q96L73 Orphanet:228415
Orphanet:238613 PharmGKB:PA31790 HOGENOM:HOG000113857
HOVERGEN:HBG007518 InParanoid:Q96L73 KO:K15588 OMA:NIDKMRH
OrthoDB:EOG49GKFN PhylomeDB:Q96L73 ChiTaRS:NSD1 GenomeRNAi:64324
NextBio:66241 ArrayExpress:Q96L73 Bgee:Q96L73 CleanEx:HS_NSD1
Genevestigator:Q96L73 GermOnline:ENSG00000165671 Uniprot:Q96L73
Length = 2696
Score = 152 (58.6 bits), Expect = 5.8e-06, Sum P(5) = 5.8e-06
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQ 647
N C +C++GG+LL CD CP AFH+EC ++ IP+G+WYC C+
Sbjct: 1706 NVSWCFVCSEGGSLLCCDSCPAAFHRECLNID-IPEGNWYCNDCK 1749
Score = 54 (24.1 bits), Expect = 5.8e-06, Sum P(5) = 5.8e-06
Identities = 18/81 (22%), Positives = 39/81 (48%)
Query: 64 SNSDDLLEDDVIDKRINSKIHEGRINKVVKNVLNENGILESVVEEENQLVQMTVENVIEE 123
S SD + + + +SK+ + ++VKN +N + + NQL +T++ V++
Sbjct: 1011 SRSDCVTRRNCGRSKPSSKLRDAFSAQMVKNTVNRKALKTERKRKLNQLPSVTLDAVLQG 1070
Query: 124 ------TVKGKKAPICKEEPI 138
+++G KE+P+
Sbjct: 1071 DRERGGSLRGGAEDPSKEDPL 1091
Score = 53 (23.7 bits), Expect = 6.3e-05, Sum P(5) = 6.3e-05
Identities = 42/197 (21%), Positives = 72/197 (36%)
Query: 40 RCKRFKVTKVNGFIVYSRVKRSRFSNSDDLLEDDVIDKRINSKIHEGRINKVVKNVLNEN 99
+C R K + S+VK D+ D I S ++ + + ++N
Sbjct: 601 KCSREKNKPQRSLVCGSKVKLCYIGAGDEEKRSDSISICTTSDDGSSDLDPIEHSSESDN 660
Query: 100 GILE---SVVEEENQLVQMTVENV-------IEETVKGKKAPICKEEPISKVE-CFPRKE 148
+LE + EN L E + VK K+ P+ + C E
Sbjct: 661 SVLEIPDAFDRTENMLSMQKNEKIKYSRFAATNTRVKAKQKPLISNSHTDHLMGCTKSAE 720
Query: 149 GGSEVSNGLNKKCLKRPSAM-KPKVEPVEVLVTQSEGFGNESMSLIEVEAIAEGSALTSP 207
G+E S +N LK + + KP+ + + S F N S S+ ++ +G A
Sbjct: 721 PGTETSQ-VNLSDLKASTLVHKPQSDFTNDAL--SPKF-NLSSSISSENSLIKGGAANQA 776
Query: 208 KKNLELKMSKKISLNKK 224
+ + K K S+ K
Sbjct: 777 LLHSKSKQPKFRSIKCK 793
Score = 49 (22.3 bits), Expect = 5.8e-06, Sum P(5) = 5.8e-06
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 719 CEREFHVGCLKKHKMADLRELPKGKWFC 746
C + +H CL +L + P GKW C
Sbjct: 2138 CPKVYHADCL------NLTKRPAGKWEC 2159
Score = 46 (21.3 bits), Expect = 5.8e-06, Sum P(5) = 5.8e-06
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 341 RCKGTFPITCVGKTG-P-GP-LCNSC 363
+C G F + C+G T P G +CN C
Sbjct: 1561 QCCGAFHLECLGLTEMPRGKFICNEC 1586
Score = 45 (20.9 bits), Expect = 5.8e-06, Sum P(5) = 5.8e-06
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 4 ELDYELAGSLDETSTQSLPQAGIQASDCV 32
EL L G L + + LP +G SDCV
Sbjct: 990 ELSASLPGLLSDK--RDLPASGKSRSDCV 1016
Score = 42 (19.8 bits), Expect = 2.5e-05, Sum P(6) = 2.5e-05
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 447 SSRPGLIANSTPVTSVHKSSQSQRQRKITKK 477
S RP L + V + + +S+RQRK TKK
Sbjct: 1382 SPRPALESEELLVKTPG-NYESKRQRKPTKK 1411
Score = 42 (19.8 bits), Expect = 0.00014, Sum P(4) = 0.00014
Identities = 19/65 (29%), Positives = 27/65 (41%)
Query: 121 IEETVKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPVEVLVT 180
+ E +GK IC E CF K+ G +V L C K + V+ V
Sbjct: 1573 LTEMPRGKF--ICNECRTGIHTCFVCKQSGEDVKRCLLPLCGK--FYHEECVQKYPPTVM 1628
Query: 181 QSEGF 185
Q++GF
Sbjct: 1629 QNKGF 1633
Score = 39 (18.8 bits), Expect = 2.5e-05, Sum P(6) = 2.5e-05
Identities = 10/23 (43%), Positives = 10/23 (43%)
Query: 357 GPLCNSCVKSKKPQGTMTYTTGI 379
GP N C KS G M GI
Sbjct: 1231 GPRLNVCDKSSASIGDMEKEPGI 1253
Score = 39 (18.8 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 8/42 (19%), Positives = 23/42 (54%)
Query: 448 SRPGLIANS-TPVTSVHKSSQSQRQRKITKKSKKTVLISKPF 488
SR G + + P+ ++ +++++ ++ ++K L+ PF
Sbjct: 217 SRHGAVKSPFLPLAPQTETQKNKQRNEVDGSNEKAALLPAPF 258
Score = 37 (18.1 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 444 TRNSSRPGLIANSTPVTSVHKSSQSQRQRKITKKSKKTVLISKP 487
+ NS G AN +H S+ + R I K K+ ++++P
Sbjct: 763 SENSLIKGGAANQA---LLHSKSKQPKFRSIKCKHKENPVMAEP 803
>UNIPROTKB|D4AC30 [details] [associations]
symbol:D4AC30 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 IPI:IPI00781625
Ensembl:ENSRNOT00000035130 ArrayExpress:D4AC30 Uniprot:D4AC30
Length = 786
Score = 126 (49.4 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECAS--LSS--IPQGDWYCKYC 646
N D C C +GG+LL CD CP AFH +C + LS +P G+W C C
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
Score = 67 (28.6 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 713 ILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC 746
++ CD C FH+ CL+ L +P G+W C
Sbjct: 285 LIQCDYCPLLFHMDCLEP----PLTAMPLGRWMC 314
>UNIPROTKB|F1ST12 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 CTD:1107 KO:K11642 OMA:EPEPGYR
EMBL:CU972380 RefSeq:XP_003132000.1 UniGene:Ssc.1663
Ensembl:ENSSSCT00000019548 GeneID:100188906 KEGG:ssc:100188906
Uniprot:F1ST12
Length = 2002
Score = 147 (56.8 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 34/109 (31%), Positives = 48/109 (44%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQNMFERKRFLQHD 659
D+ D C +C GG ++ CD CPRA+H C L P+G W C +C+ + + D
Sbjct: 377 DHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQWEAKEED 436
Query: 660 ANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGF 708
+ E G G E R+ K+ G LLC CD S +
Sbjct: 437 DDYEEEGEEEGEKEEEDDHMEYCRVCKD-----GGELLC--CDACISSY 478
>UNIPROTKB|K7EJ43 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AC024267 HGNC:HGNC:20816
Ensembl:ENST00000584685 Uniprot:K7EJ43
Length = 215
Score = 131 (51.2 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 33/82 (40%), Positives = 44/82 (53%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECAS--LSS--IPQGDWYCKYCQNMFERKRFLQH 658
N D C C +GG+LL CD CP AFH +C + LS +P G+W C C RK+ Q
Sbjct: 79 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT--VRRKKREQK 136
Query: 659 DANAVEAGRVSGVDSVEQITKR 680
E G V+G+ V++ KR
Sbjct: 137 K----ELGHVNGL--VDKSGKR 152
>ZFIN|ZDB-GENE-030131-2581 [details] [associations]
symbol:whsc1 "Wolf-Hirschhorn syndrome candidate
1" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0018024 "histone-lysine N-methyltransferase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IMP] [GO:0010452
"histone H3-K36 methylation" evidence=IMP] [GO:0048706 "embryonic
skeletal system development" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 ZFIN:ZDB-GENE-030131-2581
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0051216
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
GO:GO:0048706 SMART:SM00293 EMBL:CR556722 KO:K11424 GO:GO:0010452
CTD:7468 EMBL:CT573111 IPI:IPI00492725 RefSeq:NP_001076020.1
UniGene:Dr.78031 Ensembl:ENSDART00000009499 GeneID:100000709
KEGG:dre:100000709 HOVERGEN:HBG106834 OMA:FESECLN NextBio:20784754
Uniprot:B8JIA4
Length = 1461
Score = 136 (52.9 bits), Expect = 8.8e-06, Sum P(3) = 8.8e-06
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 594 KGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQN 648
KG + N C IC+ GG LL C+ CP AFH +C +++ +P G W+C C++
Sbjct: 913 KGYSHHSHVNVSWCFICSKGGRLLCCESCPAAFHPDCLNIA-MPDGSWFCNDCRS 966
Score = 59 (25.8 bits), Expect = 8.8e-06, Sum P(3) = 8.8e-06
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 713 ILLCDQ--CEREFHVGCLKKHKMADLRELPKGKWFC 746
++LCD+ C + +H+ CL + K P G+W C
Sbjct: 1339 LVLCDKKGCTKAYHLSCLDRTKR------PFGRWDC 1368
Score = 51 (23.0 bits), Expect = 8.8e-06, Sum P(3) = 8.8e-06
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 439 SPWELTRNSSRPGLIANSTPVTSVHKSSQSQRQRKITKKSKKT 481
SP + S+ P L +N P+ S S ++ RK K S KT
Sbjct: 454 SPTNSSTTSTIPSLFSN--PIDSSTSSGKTALPRKARKPSVKT 494
Score = 48 (22.0 bits), Expect = 6.4e-05, Sum P(4) = 6.4e-05
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 334 EKSFACV-RCKGTFPITCVG--KTGPGPLCNSC 363
E C +C GT+ + C+G ++ LC +C
Sbjct: 770 EDIVTCAGQCYGTYHLHCIGVERSAEKILCTAC 802
Score = 39 (18.8 bits), Expect = 0.00046, Sum P(4) = 0.00046
Identities = 24/104 (23%), Positives = 41/104 (39%)
Query: 296 YICFENGKSLLEVLRACR-SVPLPMLKATLQSALSSLPEEKSF-----ACVRCKGTFPIT 349
++CF KS EV R C +A ++ + ++ E + F C+ C +
Sbjct: 807 HVCFTCKKSEGEVRRCCALHCGRFYHEACVRLSALTVFENRGFRCPLHTCLSCHYSGRAA 866
Query: 350 CVGKTGPGPLCNSCVKSKKPQGTMTYTTGIRIRASGPKLVSRSS 393
C G C C P + Y G A+G +++S S+
Sbjct: 867 CKATKGKMMRCLRC-----P---VAYHVGDLCVAAGSEMISSSA 902
Score = 38 (18.4 bits), Expect = 6.4e-05, Sum P(4) = 6.4e-05
Identities = 12/57 (21%), Positives = 22/57 (38%)
Query: 93 KNVLNENGILESVVEEENQLVQMTVENVIEETVKGKKAPICKEEPISKVECFPRKEG 149
K L SV + T+E ++ E K+ P+ + +V +K+G
Sbjct: 480 KTALPRKARKPSVKTNRRKQRSSTIEWIVTEASSAKQMPLTESTVQCEVNTEHKKKG 536
>MGI|MGI:2152406 [details] [associations]
symbol:Trim66 "tripartite motif-containing 66" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010369 "chromocenter" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249
SMART:SM00297 SMART:SM00502 MGI:MGI:2152406 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 GO:GO:0010369
EMBL:AJ307670 GeneTree:ENSGT00530000062982 CTD:9866
HOGENOM:HOG000074104 HOVERGEN:HBG057849 KO:K12032 EMBL:AY572455
EMBL:AC124457 IPI:IPI00776191 IPI:IPI00853877 RefSeq:NP_862901.3
UniGene:Mm.183528 ProteinModelPortal:Q924W6 SMR:Q924W6
STRING:Q924W6 PhosphoSite:Q924W6 PRIDE:Q924W6
Ensembl:ENSMUST00000033339 GeneID:330627 KEGG:mmu:330627
InParanoid:Q924W6 NextBio:399482 Bgee:Q924W6 CleanEx:MM_TRIM66
Genevestigator:Q924W6 Uniprot:Q924W6
Length = 1242
Score = 152 (58.6 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 31/94 (32%), Positives = 53/94 (56%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKEC--ASLSSIPQGDWYCKYCQNMFERKRFLQHD 659
+N+D C +C +GG LL CD CP+ +H C +L S P G+W C C+++ + + +++D
Sbjct: 994 ENEDFCAVCINGGELLCCDRCPKVYHLSCHVPALLSFPGGEWVCTLCRSLTQPE--MEYD 1051
Query: 660 ANAVEAG----RV-SGVDSVEQITKRCIRIVKNL 688
G RV G+ +Q K+C ++V +L
Sbjct: 1052 CENARYGHPGVRVLPGLSMYDQ--KKCEKLVLSL 1083
Score = 48 (22.0 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 16/71 (22%), Positives = 35/71 (49%)
Query: 59 KRSRFSNSDDLLEDDVIDKRINSKIHEGRINK---VVKNVLNE--NGI---LESVVEEEN 110
K+S S +ED + + + + E +I V+ N LN+ NG+ LE + E
Sbjct: 122 KKSSLQTSAKQIEDRIFEVKHQHRKVENQIKMAKMVLMNELNKQANGLIEELEGITNERK 181
Query: 111 QLVQMTVENVI 121
+ ++ +++++
Sbjct: 182 RKLEQQLQSIM 192
Score = 43 (20.2 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 286 ACKQYRRASQYICFENGKSLLEV-----LRACRSVP-LPMLK 321
A +QYR +Y FE G L+ +RA S P +P ++
Sbjct: 849 ALQQYRNPKEYENFEQGALELDTKENSDIRAISSEPKIPYVR 890
Score = 38 (18.4 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 5/23 (21%), Positives = 18/23 (78%)
Query: 468 SQRQRKITKKSKKTVLISKPFEN 490
++R+RK+ ++ + +++++ FE+
Sbjct: 178 NERKRKLEQQLQSIMVLNRQFEH 200
>UNIPROTKB|F1RGC2 [details] [associations]
symbol:TRIM66 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0016235 "aggresome" evidence=IEA]
[GO:0010369 "chromocenter" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00502 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016235 Gene3D:1.20.920.10
SUPFAM:SSF47370 GO:GO:0010369 GeneTree:ENSGT00530000062982
OMA:HMENERA EMBL:FP102759 Ensembl:ENSSSCT00000015917 Uniprot:F1RGC2
Length = 1238
Score = 151 (58.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 35/102 (34%), Positives = 58/102 (56%)
Query: 594 KGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKEC--ASLSSIPQGDWYCKYCQNMFE 651
KG P +N+D C +C +GG LL CD CP+ +H C +L S P GDW C C+++ +
Sbjct: 983 KGPPAP-VENEDFCAVCLNGGELLCCDRCPKVYHLSCHLPALLSFPGGDWVCTLCRSLTQ 1041
Query: 652 RKRFLQHDA-NAV--EAGRVS--GVDSVEQITKRCIRIVKNL 688
+ +++D NA + G + G+ +Q K+C ++V +L
Sbjct: 1042 PE--MEYDCENARYDQPGARAPPGLSLCDQ--KKCEKLVLSL 1079
Score = 44 (20.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 7/23 (30%), Positives = 18/23 (78%)
Query: 468 SQRQRKITKKSKKTVLISKPFEN 490
++R+RK+ ++ + +L+S+ FE+
Sbjct: 188 NERKRKLEQQLQSIMLLSRQFEH 210
Score = 37 (18.1 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 13/58 (22%), Positives = 26/58 (44%)
Query: 174 PVEVLVTQSEGFGNESMSLIEVEAIAEGSALTSPKKNLELKMSKKISLNKKPMTVTEL 231
PV L Q + + +IE A + ++ P+ + K+S+ +L + + V L
Sbjct: 899 PVFKLKPQKDDQDGRLLLIIECGAESSSMSIQVPQTHFLPKVSQAPNLGGRKVAVESL 956
>UNIPROTKB|F1LPP8 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000953 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50013 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00298 Pfam:PF00385 RGD:1311923 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 GO:GO:0016818 IPI:IPI00779114
Ensembl:ENSRNOT00000057058 ArrayExpress:F1LPP8 Uniprot:F1LPP8
Length = 710
Score = 140 (54.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 32/109 (29%), Positives = 50/109 (45%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQNMFERKRFLQHD 659
D+ D C +C GG ++ CD CPRA+H C L P+G W C +C+ + + +
Sbjct: 391 DHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQWEAKEEE 450
Query: 660 ANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGF 708
+ E G + + + C R+ K+ G LLC CD S +
Sbjct: 451 EDYEEEGEEGEKEEEDDHMEYC-RVCKD-----GGELLC--CDACISSY 491
Score = 123 (48.4 bits), Expect = 0.00088, P = 0.00088
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 594 KGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYC 646
+G + D+ + C +C DGG LL CD C ++H C + L IP G+W C C
Sbjct: 459 EGEKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRC 513
>MGI|MGI:1276574 [details] [associations]
symbol:Whsc1 "Wolf-Hirschhorn syndrome candidate 1 (human)"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0003149 "membranous septum morphogenesis" evidence=IMP]
[GO:0003289 "atrial septum primum morphogenesis" evidence=IMP]
[GO:0003290 "atrial septum secundum morphogenesis" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IDA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0018022 "peptidyl-lysine methylation" evidence=IDA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IDA]
[GO:0032259 "methylation" evidence=IEA] [GO:0034968 "histone lysine
methylation" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0060348 "bone development" evidence=IMP]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 MGI:MGI:1276574 Pfam:PF00855 Pfam:PF00505
GO:GO:0005634 GO:GO:0005694 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0031965 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060348 eggNOG:COG2940
GO:GO:0018024 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0003149 GO:GO:0003290 KO:K11424
UniGene:Mm.332320 HSSP:Q9BYU8 CTD:7468 OMA:DVKRCVV ChiTaRS:WHSC1
EMBL:EU733655 EMBL:AK129287 EMBL:AC163329 EMBL:AK078622
EMBL:BC046473 EMBL:BC053454 IPI:IPI00107975 IPI:IPI00671804
IPI:IPI00762411 IPI:IPI00902751 RefSeq:NP_001074571.2
RefSeq:NP_780440.2 UniGene:Mm.19892 UniGene:Mm.490310
ProteinModelPortal:Q8BVE8 SMR:Q8BVE8 STRING:Q8BVE8
PhosphoSite:Q8BVE8 PaxDb:Q8BVE8 PRIDE:Q8BVE8
Ensembl:ENSMUST00000058096 Ensembl:ENSMUST00000066854
Ensembl:ENSMUST00000075812 GeneID:107823 KEGG:mmu:107823
UCSC:uc008xbm.2 UCSC:uc012duw.1 HOGENOM:HOG000230893
HOVERGEN:HBG079979 NextBio:359529 Bgee:Q8BVE8 CleanEx:MM_WHSC1
Genevestigator:Q8BVE8 GermOnline:ENSMUSG00000057406 Uniprot:Q8BVE8
Length = 1365
Score = 137 (53.3 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 594 KGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQ 647
KG+++ N C +C+ GG+LL C+ CP AFH +C ++ +P G W+C C+
Sbjct: 821 KGKRHHTHVNVSWCFVCSKGGSLLCCEACPAAFHPDCLNIE-MPDGSWFCNDCR 873
Score = 59 (25.8 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 713 ILLCDQ--CEREFHVGCLKKHKMADLRELPKGKWFC 746
++LCD+ C + +H+ CL L + P GKW C
Sbjct: 1251 LVLCDRKFCTKAYHLSCL------GLGKRPFGKWEC 1280
Score = 47 (21.6 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 15/52 (28%), Positives = 22/52 (42%)
Query: 192 LIEVEAIAEGSALTSPKKNLELKMSKKISLNKK-PMTVTELFETGLLDGVSV 242
L E +G+A S + E K K N+K + L E GL++ V
Sbjct: 138 LFESSICGDGAADVSQSEENEQKSDNKTRRNRKRSIKYDSLLEQGLVEAALV 189
Score = 42 (19.8 bits), Expect = 0.00012, Sum P(4) = 0.00012
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 56 SRVKRSRFSNSDDLLEDDVIDKRINSKIHEGRINKV 91
+R R R D LLE +++ + SKI K+
Sbjct: 165 TRRNRKRSIKYDSLLEQGLVEAALVSKISSPADKKI 200
Score = 39 (18.8 bits), Expect = 0.00012, Sum P(4) = 0.00012
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 194 EVEAIAEGSALTSPKKNLELKMSKKIS 220
+ E + + SA +P K ++K+ K IS
Sbjct: 289 QFEKLCQESAKQAPTKAEKIKLLKPIS 315
>UNIPROTKB|F1LM99 [details] [associations]
symbol:F1LM99 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR008984
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00249 GO:GO:0017053 GO:GO:0046872 GO:GO:0008270
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 OMA:MSSQAQG GeneTree:ENSGT00440000033777
IPI:IPI00369959 Ensembl:ENSRNOT00000056234 ArrayExpress:F1LM99
Uniprot:F1LM99
Length = 1003
Score = 126 (49.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECAS--LSS--IPQGDWYCKYC 646
N D C C +GG+LL CD CP AFH +C + LS +P G+W C C
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
Score = 67 (28.6 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 713 ILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC 746
++ CD C FH+ CL+ L +P G+W C
Sbjct: 285 LIQCDYCPLLFHMDCLEP----PLTAMPLGRWMC 314
>RGD|1595847 [details] [associations]
symbol:Trim66 "tripartite motif-containing 66" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010369 "chromocenter" evidence=ISO] [GO:0016235
"aggresome" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 RGD:1595847 GO:GO:0005634 GO:GO:0045892
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016235 Gene3D:1.20.920.10 SUPFAM:SSF47370
GO:GO:0010369 GeneTree:ENSGT00530000062982 IPI:IPI00366002
PRIDE:F1M6Z0 Ensembl:ENSRNOT00000019368 UCSC:RGD:1595847
NextBio:676966 ArrayExpress:F1M6Z0 Uniprot:F1M6Z0
Length = 1307
Score = 147 (56.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 31/95 (32%), Positives = 55/95 (57%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKEC--ASLSSIPQGDWYCKYCQNMFERKRFLQHD 659
+N+D C +C +GG LL CD CP+ +H C +L S P G+W C C+++ + + +++D
Sbjct: 1059 ENEDFCAVCINGGELLCCDRCPKVYHLSCHVPALLSFPGGEWVCTLCRSLTQPE--MEYD 1116
Query: 660 ANAVEAGRVS--GVDSVEQIT----KRCIRIVKNL 688
E R S GV ++ ++ K+C ++V +L
Sbjct: 1117 C---ENARYSHPGVRALPGLSMYDQKKCEKLVLSL 1148
Score = 48 (22.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 16/71 (22%), Positives = 35/71 (49%)
Query: 59 KRSRFSNSDDLLEDDVIDKRINSKIHEGRINK---VVKNVLNE--NGI---LESVVEEEN 110
K+S S +ED + + + + E +I V+ N LN+ NG+ LE + E
Sbjct: 186 KKSSLQTSAKQIEDRIFEVKHQHRKVENQIKMAKMVLMNELNKQANGLIEELEGITNERK 245
Query: 111 QLVQMTVENVI 121
+ ++ +++++
Sbjct: 246 RKLEQQLQSIM 256
Score = 41 (19.5 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 12/48 (25%), Positives = 19/48 (39%)
Query: 5 LDYELAGSLDETSTQSLPQAGIQASDCVKAACENVRCKRFKVTKVNGF 52
+D A SL +TS + P + + + NV K + GF
Sbjct: 647 VDKNTATSLSQTSGEETPHSAPSVDSSSQHSSPNVVRKHATSVSIMGF 694
Score = 38 (18.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 5/23 (21%), Positives = 18/23 (78%)
Query: 468 SQRQRKITKKSKKTVLISKPFEN 490
++R+RK+ ++ + +++++ FE+
Sbjct: 242 NERKRKLEQQLQSIMVLNRQFEH 264
>UNIPROTKB|F1SBF4 [details] [associations]
symbol:ZMYND8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 OMA:VDNIRRK EMBL:CU607040
Ensembl:ENSSSCT00000008158 Uniprot:F1SBF4
Length = 931
Score = 141 (54.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 31/92 (33%), Positives = 50/92 (54%)
Query: 568 SSRRKPYAHIYTSNGVSLHQLAISLSKGRQYPG------KD----NDDLCTICADGGNLL 617
+ +RK + ++SNG S + S K ++ PG K+ ND C +C G +L
Sbjct: 17 AQKRKFPSPPHSSNGHSPQDTSTSPIKKKKKPGLLNSNNKEQDGRNDFYCWVCHREGQVL 76
Query: 618 PCDGCPRAFHKECASLSSIPQGDWYCKYCQNM 649
C+ CPR +H +C L+S P+GDW+C C+ +
Sbjct: 77 CCELCPRVYHAKCLRLTSEPEGDWFCPECEKI 108
>UNIPROTKB|B7ZM62 [details] [associations]
symbol:ZMYND8 "ZMYND8 protein" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR002893 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01753 PRINTS:PR00503
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666
UniGene:Hs.446240 UniGene:Hs.658553 UniGene:Hs.668465
HGNC:HGNC:9397 HOVERGEN:HBG031823 InterPro:IPR021931 Pfam:PF12064
EMBL:AL390212 EMBL:BC136608 EMBL:BC144289 IPI:IPI00922821
SMR:B7ZM62 STRING:B7ZM62 Ensembl:ENST00000458360 UCSC:uc010zxz.1
HOGENOM:HOG000230951 Uniprot:B7ZM62
Length = 1054
Score = 141 (54.7 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 31/92 (33%), Positives = 50/92 (54%)
Query: 568 SSRRKPYAHIYTSNGVSLHQLAISLSKGRQYPG------KD----NDDLCTICADGGNLL 617
+ +RK + ++SNG S + S K ++ PG K+ ND C +C G +L
Sbjct: 37 AQKRKFPSPPHSSNGHSPQDTSTSPIKKKKKPGLLNSNNKEQDGRNDFYCWVCHREGQVL 96
Query: 618 PCDGCPRAFHKECASLSSIPQGDWYCKYCQNM 649
C+ CPR +H +C L+S P+GDW+C C+ +
Sbjct: 97 CCELCPRVYHAKCLRLTSEPEGDWFCPECEKI 128
>UNIPROTKB|F1N544 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:DAAA02048806
IPI:IPI00716282 Ensembl:ENSBTAT00000019119 ArrayExpress:F1N544
Uniprot:F1N544
Length = 1998
Score = 144 (55.7 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 33/109 (30%), Positives = 48/109 (44%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQNMFERKRFLQHD 659
D+ D C +C GG ++ CD CPRA+H C L P+G W C +C+ + + +
Sbjct: 373 DHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQWEAKEEE 432
Query: 660 ANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGF 708
+ E G G E R+ K+ G LLC CD S +
Sbjct: 433 EDYEEEGEEEGEKEEEDDHMEYCRVCKD-----GGELLC--CDACISSY 474
>UNIPROTKB|Q2HXV1 [details] [associations]
symbol:ZMYND8 "RACK7 isoform l" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR002893 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01753 PROSITE:PS01360
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865 SMART:SM00249
SMART:SM00297 Pfam:PF00855 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR000313
PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666 UniGene:Hs.446240
UniGene:Hs.658553 UniGene:Hs.668465 HGNC:HGNC:9397
HOVERGEN:HBG031823 InterPro:IPR021931 Pfam:PF12064 EMBL:AL390212
EMBL:DQ368680 IPI:IPI01009867 SMR:Q2HXV1 Ensembl:ENST00000540497
UCSC:uc002xsv.1 Uniprot:Q2HXV1
Length = 1134
Score = 141 (54.7 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 31/92 (33%), Positives = 50/92 (54%)
Query: 568 SSRRKPYAHIYTSNGVSLHQLAISLSKGRQYPG------KD----NDDLCTICADGGNLL 617
+ +RK + ++SNG S + S K ++ PG K+ ND C +C G +L
Sbjct: 37 AQKRKFPSPPHSSNGHSPQDTSTSPIKKKKKPGLLNSNNKEQDGRNDFYCWVCHREGQVL 96
Query: 618 PCDGCPRAFHKECASLSSIPQGDWYCKYCQNM 649
C+ CPR +H +C L+S P+GDW+C C+ +
Sbjct: 97 CCELCPRVYHAKCLRLTSEPEGDWFCPECEKI 128
>UNIPROTKB|Q2HXV3 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666
UniGene:Hs.446240 UniGene:Hs.658553 UniGene:Hs.668465
HGNC:HGNC:9397 HOVERGEN:HBG031823 InterPro:IPR021931 Pfam:PF12064
EMBL:AL390212 EMBL:DQ368678 IPI:IPI00941004 SMR:Q2HXV3
STRING:Q2HXV3 Ensembl:ENST00000372023 UCSC:uc010ghr.1
Uniprot:Q2HXV3
Length = 1136
Score = 141 (54.7 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 31/92 (33%), Positives = 50/92 (54%)
Query: 568 SSRRKPYAHIYTSNGVSLHQLAISLSKGRQYPG------KD----NDDLCTICADGGNLL 617
+ +RK + ++SNG S + S K ++ PG K+ ND C +C G +L
Sbjct: 37 AQKRKFPSPPHSSNGHSPQDTSTSPIKKKKKPGLLNSNNKEQDGRNDFYCWVCHREGQVL 96
Query: 618 PCDGCPRAFHKECASLSSIPQGDWYCKYCQNM 649
C+ CPR +H +C L+S P+GDW+C C+ +
Sbjct: 97 CCELCPRVYHAKCLRLTSEPEGDWFCPECEKI 128
>UNIPROTKB|E2R8R1 [details] [associations]
symbol:ZMYND8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 EMBL:AAEX03013984 EMBL:AAEX03013985
Ensembl:ENSCAFT00000017108 OMA:PTINKGR Uniprot:E2R8R1
Length = 1143
Score = 141 (54.7 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 31/92 (33%), Positives = 50/92 (54%)
Query: 568 SSRRKPYAHIYTSNGVSLHQLAISLSKGRQYPG------KD----NDDLCTICADGGNLL 617
+ +RK + ++SNG S + S K ++ PG K+ ND C +C G +L
Sbjct: 37 AQKRKFPSPPHSSNGHSPQDTSTSPIKKKKKPGLLNNNNKEQDGRNDFYCWVCHREGQVL 96
Query: 618 PCDGCPRAFHKECASLSSIPQGDWYCKYCQNM 649
C+ CPR +H +C L+S P+GDW+C C+ +
Sbjct: 97 CCELCPRVYHAKCLRLTSEPEGDWFCPECEKI 128
>UNIPROTKB|J3KPU3 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666
HGNC:HGNC:9397 InterPro:IPR021931 Pfam:PF12064 EMBL:AL390212
ProteinModelPortal:J3KPU3 Ensembl:ENST00000396281 Uniprot:J3KPU3
Length = 1186
Score = 141 (54.7 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 31/92 (33%), Positives = 50/92 (54%)
Query: 568 SSRRKPYAHIYTSNGVSLHQLAISLSKGRQYPG------KD----NDDLCTICADGGNLL 617
+ +RK + ++SNG S + S K ++ PG K+ ND C +C G +L
Sbjct: 42 AQKRKFPSPPHSSNGHSPQDTSTSPIKKKKKPGLLNSNNKEQDGRNDFYCWVCHREGQVL 101
Query: 618 PCDGCPRAFHKECASLSSIPQGDWYCKYCQNM 649
C+ CPR +H +C L+S P+GDW+C C+ +
Sbjct: 102 CCELCPRVYHAKCLRLTSEPEGDWFCPECEKI 133
>UNIPROTKB|Q12873 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0004386 "helicase activity" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007051 "spindle organization" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0051297 "centrosome organization" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0016581 "NuRD complex" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
EMBL:CH471108 GO:GO:0005730 GO:GO:0051297 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006357 GO:GO:0006351
GO:GO:0016568 Gene3D:1.10.30.10 GO:GO:0045111 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003
InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007051 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 EMBL:U91543 EMBL:AF006515 EMBL:U08379 IPI:IPI00373870
IPI:IPI00411592 RefSeq:NP_001005271.2 RefSeq:NP_001005273.1
RefSeq:NP_005843.2 UniGene:Hs.25601 ProteinModelPortal:Q12873
SMR:Q12873 DIP:DIP-32496N IntAct:Q12873 MINT:MINT-1185641
STRING:Q12873 PhosphoSite:Q12873 DMDM:88911273 PaxDb:Q12873
PRIDE:Q12873 Ensembl:ENST00000330494 Ensembl:ENST00000358181
GeneID:1107 KEGG:hsa:1107 UCSC:uc002gje.2 UCSC:uc002gjf.2
GeneCards:GC17P007788 H-InvDB:HIX0013516 HGNC:HGNC:1918
HPA:HPA043368 MIM:602120 neXtProt:NX_Q12873 PharmGKB:PA26454
HOVERGEN:HBG005326 KO:K11642 PhylomeDB:Q12873 ChiTaRS:CHD3
GenomeRNAi:1107 NextBio:4590 ArrayExpress:Q12873 Bgee:Q12873
CleanEx:HS_CHD3 Genevestigator:Q12873 GermOnline:ENSG00000170004
Uniprot:Q12873
Length = 2000
Score = 143 (55.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 33/109 (30%), Positives = 47/109 (43%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQNMFERKRFLQHD 659
D+ D C +C GG ++ CD CPRA+H C L P+G W C +C+ + + +
Sbjct: 377 DHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQWEAKEEE 436
Query: 660 ANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGF 708
E G G E R+ K+ G LLC CD S +
Sbjct: 437 EEYEEEGEEEGEKEEEDDHMEYCRVCKD-----GGELLC--CDACISSY 478
>UNIPROTKB|E9PG89 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006333 "chromatin assembly or
disassembly" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IDA] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005730 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 GO:GO:0045111
GO:GO:0006333 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 RefSeq:NP_001005271.2 UniGene:Hs.25601 GeneID:1107
KEGG:hsa:1107 HGNC:HGNC:1918 KO:K11642 ChiTaRS:CHD3 GenomeRNAi:1107
NextBio:4590 EMBL:AC104581 IPI:IPI00465222
ProteinModelPortal:E9PG89 SMR:E9PG89 PRIDE:E9PG89
Ensembl:ENST00000380358 UCSC:uc002gjd.2 OMA:EPEPGYR
ArrayExpress:E9PG89 Bgee:E9PG89 Uniprot:E9PG89
Length = 2059
Score = 143 (55.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 33/109 (30%), Positives = 47/109 (43%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQNMFERKRFLQHD 659
D+ D C +C GG ++ CD CPRA+H C L P+G W C +C+ + + +
Sbjct: 436 DHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQWEAKEEE 495
Query: 660 ANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGF 708
E G G E R+ K+ G LLC CD S +
Sbjct: 496 EEYEEEGEEEGEKEEEDDHMEYCRVCKD-----GGELLC--CDACISSY 537
>POMBASE|SPAC2F7.07c [details] [associations]
symbol:cph2 "Clr6 histone deacetylase associated PHD
protein-2 Cph2" species:4896 "Schizosaccharomyces pombe"
[GO:0005634 "nucleus" evidence=IDA] [GO:0005819 "spindle"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016575 "histone
deacetylation" evidence=ISO] [GO:0019787 "small conjugating protein
ligase activity" evidence=ISM] [GO:0032221 "Rpd3S complex"
evidence=IDA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 PomBase:SPAC2F7.07c EMBL:CU329670
GO:GO:0005819 GO:GO:0046872 GO:GO:0008270 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0019787
GO:GO:0016575 GO:GO:0032221 eggNOG:NOG145066 OrthoDB:EOG4TQQJV
PIR:T38555 RefSeq:NP_592978.1 ProteinModelPortal:Q09698
DIP:DIP-29347N STRING:Q09698 EnsemblFungi:SPAC2F7.07c.1
GeneID:2541422 KEGG:spo:SPAC2F7.07c NextBio:20802526 Uniprot:Q09698
Length = 607
Score = 119 (46.9 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 597 QYPGKDNDDLCTICADGGNLLPCDGCPRAFHKECASL----SSIPQGDWYCKYCQN 648
+YP + N+D C+ C GN L C+ CP +FH C ++P WYC C++
Sbjct: 256 EYPYRYNNDYCSACHGPGNFLCCETCPNSFHFTCIDPPIEEKNLPDDAWYCNECKH 311
Score = 67 (28.6 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 19/53 (35%), Positives = 23/53 (43%)
Query: 696 LLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKG--KWFC 746
+LC C KS ++IL CD C +H CL L LP KW C
Sbjct: 407 ILCFRCH--KSALVSQSILACDYCNSYWHPDCLNP----PLATLPSNLRKWKC 453
>ZFIN|ZDB-GENE-121031-4 [details] [associations]
symbol:chd3 "chromodomain helicase DNA binding
protein 3" species:7955 "Danio rerio" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 ZFIN:ZDB-GENE-121031-4
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016818 EMBL:BC127572
EMBL:BC127574 IPI:IPI00488488 UniGene:Dr.66871 eggNOG:NOG299768
InParanoid:A0PJQ7 OMA:DSTHEET Uniprot:A0PJQ7
Length = 430
Score = 133 (51.9 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQ 647
D+ D C +C GG ++ CD CPRA+H C L P+G W C +C+
Sbjct: 381 DHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELEKAPEGKWSCPHCE 428
Score = 48 (22.0 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 59 KRSRFSNSDDLLEDDVIDKRINSKIHEGRI 88
KR + S+S+++ EDD ++ NS +H +
Sbjct: 319 KRKKSSSSEEVDEDD--SEQENSSVHSSSV 346
Score = 45 (20.9 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 12/45 (26%), Positives = 21/45 (46%)
Query: 448 SRPGLIANSTPVTSVHKSSQSQRQRKITKKSKKTVLISKPFENAS 492
S P NS S + + ++++ KK KKT K E+++
Sbjct: 111 SEPDYAMNSDSAASDYGGEKKKKKKHKDKKEKKTKKKKKEDEDST 155
>MGI|MGI:1276545 [details] [associations]
symbol:Nsd1 "nuclear receptor-binding SET-domain protein 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0001702 "gastrulation with mouth forming second" evidence=IMP]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0003712
"transcription cofactor activity" evidence=ISO;IDA] [GO:0003714
"transcription corepressor activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=ISO] [GO:0010452 "histone H3-K36
methylation" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IPI]
[GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=IEA] [GO:0030331 "estrogen receptor binding" evidence=IPI]
[GO:0032259 "methylation" evidence=IEA] [GO:0035097 "histone
methyltransferase complex" evidence=IC] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0042799 "histone
methyltransferase activity (H4-K20 specific)" evidence=IDA]
[GO:0042974 "retinoic acid receptor binding" evidence=IPI]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046965 "retinoid X receptor binding" evidence=IPI] [GO:0046966
"thyroid hormone receptor binding" evidence=IPI] [GO:0046975
"histone methyltransferase activity (H3-K36 specific)"
evidence=ISO;IDA] [GO:0050681 "androgen receptor binding"
evidence=ISO] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
EMBL:AF064553 MGI:MGI:1276545 Pfam:PF00855 GO:GO:0003714
GO:GO:0005694 GO:GO:0045893 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 GO:GO:0000122 UniGene:Mm.12964
GO:GO:0001702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0050681 eggNOG:COG2940 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GO:GO:0042799 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 GO:GO:0046975 GO:GO:0035097
HOGENOM:HOG000113857 HOVERGEN:HBG007518 OrthoDB:EOG49GKFN
ChiTaRS:NSD1 EMBL:AK082820 EMBL:AK004485 IPI:IPI00131111 PIR:T14342
UniGene:Mm.168965 ProteinModelPortal:O88491 SMR:O88491
STRING:O88491 PhosphoSite:O88491 PaxDb:O88491 PRIDE:O88491
UCSC:uc007qqd.1 CleanEx:MM_NSD1 Genevestigator:O88491
GermOnline:ENSMUSG00000021488 Uniprot:O88491
Length = 2588
Score = 152 (58.6 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQ 647
N C +C++GG+LL CD CP AFH+EC ++ IP+G+WYC C+
Sbjct: 1604 NVSWCFVCSEGGSLLCCDSCPAAFHRECLNID-IPEGNWYCNDCK 1647
Score = 49 (22.3 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 719 CEREFHVGCLKKHKMADLRELPKGKWFC 746
C + +H CL +L + P GKW C
Sbjct: 2036 CPKVYHADCL------NLTKRPAGKWEC 2057
Score = 48 (22.0 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 20/65 (30%), Positives = 28/65 (43%)
Query: 121 IEETVKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPVEVLVT 180
+ E +GK IC E CF K+ G +V L C K + V+ VT
Sbjct: 1471 LPEMPRGKF--ICNECHTGIHTCFVCKQSGEDVKRCLLPLCGK--FYHEECVQKYPPTVT 1526
Query: 181 QSEGF 185
Q++GF
Sbjct: 1527 QNKGF 1531
Score = 42 (19.8 bits), Expect = 0.00067, Sum P(4) = 0.00067
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 447 SSRPGLIANSTPVTSVHKSSQSQRQRKITKK 477
S RP L + V + + +S+RQRK TKK
Sbjct: 1280 SPRPALESEELLVKTPG-NYESKRQRKPTKK 1309
Score = 41 (19.5 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 341 RCKGTFPITCVG--KTGPGP-LCNSC 363
+C G F + C+G + G +CN C
Sbjct: 1459 QCCGAFHLECLGLPEMPRGKFICNEC 1484
Score = 37 (18.1 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 6/27 (22%), Positives = 15/27 (55%)
Query: 455 NSTPVTSVHKSSQSQRQRKITKKSKKT 481
N +P+ ++ KS + + + + +KT
Sbjct: 716 NGSPLANISKSGKGEGLKLLNNMHEKT 742
Score = 37 (18.1 bits), Expect = 0.00067, Sum P(4) = 0.00067
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 358 PLCNSCVKSKKPQGTMTYTTGI 379
P N C KS G + TGI
Sbjct: 1130 PRLNVCEKSSVGMGDVEKETGI 1151
>UNIPROTKB|F1NH78 [details] [associations]
symbol:F1NH78 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02040929 EMBL:AADN02040930 IPI:IPI00571784
Ensembl:ENSGALT00000023340 ArrayExpress:F1NH78 Uniprot:F1NH78
Length = 1781
Score = 142 (55.0 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 36/119 (30%), Positives = 52/119 (43%)
Query: 592 LSKGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQNM 649
+ +G Y D+ D C +C GG ++ CD CPRA+H C L P+G W C +C+
Sbjct: 262 IEEGDGYE-TDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCE-- 318
Query: 650 FERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGF 708
K +Q + E G + E R+ K+ G LLC CD S +
Sbjct: 319 ---KEGIQWEPKEEEDEEEEGGEEEEDDHMEFCRVCKD-----GGELLC--CDTCPSSY 367
Score = 132 (51.5 bits), Expect = 0.00029, P = 0.00029
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 594 KGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYC 646
+G + D+ + C +C DGG LL CD CP ++H C + L IP G+W C C
Sbjct: 335 EGGEEEEDDHMEFCRVCKDGGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRC 389
>UNIPROTKB|I3LDB0 [details] [associations]
symbol:I3LDB0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0001967
"suckling behavior" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00384
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 OMA:SCTVNCN
GeneTree:ENSGT00530000063984 EMBL:FP101987
Ensembl:ENSSSCT00000023373 Uniprot:I3LDB0
Length = 563
Score = 136 (52.9 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 590 ISLSKGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQ 647
+SL G ++D C++C G LL CD C R +H +C L +IP+G W C CQ
Sbjct: 354 VSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQ 413
Query: 648 NMFERK 653
+ +K
Sbjct: 414 DQMLKK 419
>UNIPROTKB|F1M5S0 [details] [associations]
symbol:RGD1560612 "Protein RGD1560612" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GeneTree:ENSGT00530000063984 IPI:IPI00947688
Ensembl:ENSRNOT00000066219 ArrayExpress:F1M5S0 Uniprot:F1M5S0
Length = 573
Score = 136 (52.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 590 ISLSKGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQ 647
+SL G ++D C++C G LL CD C R +H +C L +IP+G W C CQ
Sbjct: 368 VSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLEPPLKTIPKGMWICPRCQ 427
Query: 648 NMFERK 653
+ +K
Sbjct: 428 DQMLKK 433
>UNIPROTKB|F1NP02 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GeneTree:ENSGT00530000063984 EMBL:AADN02033506
EMBL:AADN02033505 IPI:IPI00680686 Ensembl:ENSGALT00000030514
ArrayExpress:F1NP02 Uniprot:F1NP02
Length = 603
Score = 136 (52.9 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 590 ISLSKGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQ 647
+SL G ++D C++C G LL CD C R +H +C L +IP+G W C CQ
Sbjct: 398 VSLPSPSSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPKCQ 457
Query: 648 NMFERK 653
+ +K
Sbjct: 458 DQMLKK 463
>RGD|1307748 [details] [associations]
symbol:Nsd1 "nuclear receptor binding SET domain protein 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0001702 "gastrulation with mouth forming second"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003712
"transcription cofactor activity" evidence=IEA;ISO] [GO:0003714
"transcription corepressor activity" evidence=ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA;ISO] [GO:0010452
"histone H3-K36 methylation" evidence=ISO] [GO:0016571 "histone
methylation" evidence=ISO] [GO:0016922 "ligand-dependent nuclear
receptor binding" evidence=ISO] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0042054 "histone
methyltransferase activity" evidence=ISO] [GO:0042799 "histone
methyltransferase activity (H4-K20 specific)" evidence=ISO]
[GO:0042974 "retinoic acid receptor binding" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0046965 "retinoid X receptor binding"
evidence=ISO] [GO:0046966 "thyroid hormone receptor binding"
evidence=ISO] [GO:0046975 "histone methyltransferase activity
(H3-K36 specific)" evidence=ISO] [GO:0050681 "androgen receptor
binding" evidence=IEA;ISO] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 RGD:1307748 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:CH474032
CTD:64324 KO:K15588 OrthoDB:EOG49GKFN IPI:IPI00779102
RefSeq:NP_001100807.1 UniGene:Rn.224915 Ensembl:ENSRNOT00000060928
GeneID:306764 KEGG:rno:306764 UCSC:RGD:1307748 NextBio:656473
Uniprot:D4AA06
Length = 2381
Score = 152 (58.6 bits), Expect = 2.8e-05, Sum P(4) = 2.8e-05
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQ 647
N C +C++GG+LL CD CP AFH+EC ++ IP+G+WYC C+
Sbjct: 1396 NVSWCFVCSEGGSLLCCDSCPAAFHRECLNID-IPEGNWYCNDCK 1439
Score = 49 (22.3 bits), Expect = 2.8e-05, Sum P(4) = 2.8e-05
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 719 CEREFHVGCLKKHKMADLRELPKGKWFC 746
C + +H CL +L + P GKW C
Sbjct: 1828 CPKVYHADCL------NLTKRPAGKWEC 1849
Score = 46 (21.3 bits), Expect = 2.8e-05, Sum P(4) = 2.8e-05
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 341 RCKGTFPITCVGKTG-P-GP-LCNSC 363
+C G F + C+G T P G +CN C
Sbjct: 1251 QCCGAFHLECLGLTEMPRGKFICNEC 1276
Score = 46 (21.3 bits), Expect = 2.8e-05, Sum P(4) = 2.8e-05
Identities = 52/261 (19%), Positives = 95/261 (36%)
Query: 4 ELDYELAGSLDETSTQSLPQAGIQASDCVKA----ACENVRCKRFKVTKVNGFIVYSRVK 59
E D L G L + S A + C K+ + +N+ KR V K G + + K
Sbjct: 159 EHDLLLNGCLKSLAFDSEHSADEKEKPCAKSRVRKSSDNI--KRTSVKK--GLMPFEAQK 214
Query: 60 RSRFSNSDDLLEDDVIDKRINSKIHEGRINKVVKNVLNENGILESVVEEENQLVQMTVEN 119
R S + L D + ++ K ++++ ++ + + + Q T +
Sbjct: 215 EERRGKSPENLGLDFLSGGVSDKQASNELSRIANSLTGSSAAPGQFLF--SSCGQNTAKT 272
Query: 120 VIEETVKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPVEVLV 179
E + + + ISK +K +V + + C + + + V V
Sbjct: 273 DFETPNCDSLSGLSESALISKHSGEKKKLQPGQVCSSKVQLCYVGAGDEEKRSDSVSVCT 332
Query: 180 TQSEGFG-------NESM--SLIEV-EAIAEGSALTSPKKNLELKMSKKISLN----KKP 225
T +G N S++EV +A+ + S KN E K S+ + N K+
Sbjct: 333 TSDDGSSDLDPTEHNSEFHKSVLEVTDALDKTENALSMHKN-ETKYSRYPATNRVKEKQK 391
Query: 226 MTVTELFETGLLDGVSVVYMG 246
+T L+D V G
Sbjct: 392 SLITNSHTDHLMDSTKTVEPG 412
Score = 45 (20.9 bits), Expect = 3.5e-05, Sum P(4) = 3.5e-05
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 455 NSTPVTSVHKSSQSQRQRKITKKSKKT 481
N +P+TS+ KS + + + + +KT
Sbjct: 511 NGSPMTSISKSGKGEGLKLLNNMHEKT 537
Score = 44 (20.5 bits), Expect = 4.4e-05, Sum P(4) = 4.4e-05
Identities = 10/23 (43%), Positives = 11/23 (47%)
Query: 357 GPLCNSCVKSKKPQGTMTYTTGI 379
GP N C KS G + TGI
Sbjct: 920 GPRLNVCDKSSVSMGDLEKETGI 942
Score = 43 (20.2 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 19/65 (29%), Positives = 27/65 (41%)
Query: 121 IEETVKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPVEVLVT 180
+ E +GK IC E CF K+ G +V L C K + V+ V
Sbjct: 1263 LTEMPRGKF--ICNECRTGIHTCFVCKQSGEDVKRCLLPLCGK--FYHEECVQKYPPTVV 1318
Query: 181 QSEGF 185
Q++GF
Sbjct: 1319 QNKGF 1323
Score = 40 (19.1 bits), Expect = 0.00011, Sum P(4) = 0.00011
Identities = 19/67 (28%), Positives = 28/67 (41%)
Query: 125 VKGKKAPICKEEPISKVECFPRKEG--GSEVSNGLNKKCL-KRPSAMKPKVEPV--EVLV 179
+KG KEEP+ +++ +E S+V K L K PS K V E+ +
Sbjct: 773 LKGGAQDPAKEEPLQQMDLLRNEETHFDSKVKQSDPDKILEKEPSFENRKGPEVGSEINI 832
Query: 180 TQSEGFG 186
E G
Sbjct: 833 ENDEPHG 839
>UNIPROTKB|F1MS13 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0001967
"suckling behavior" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00384
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0001967
GO:GO:0003682 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0000118 OMA:SCTVNCN
GeneTree:ENSGT00530000063984 EMBL:DAAA02041566 EMBL:DAAA02041567
IPI:IPI00716921 Ensembl:ENSBTAT00000012652 Uniprot:F1MS13
Length = 631
Score = 136 (52.9 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 590 ISLSKGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQ 647
+SL G ++D C++C G LL CD C R +H +C L +IP+G W C CQ
Sbjct: 422 VSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQ 481
Query: 648 NMFERK 653
+ +K
Sbjct: 482 DQMLKK 487
>RGD|1560612 [details] [associations]
symbol:Phf21a "PHD finger protein 21A" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0001967
"suckling behavior" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00384
RGD:1560612 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
GeneTree:ENSGT00530000063984 IPI:IPI00952132
Ensembl:ENSRNOT00000067664 UCSC:RGD:1560612 ArrayExpress:F1M6K4
Uniprot:F1M6K4
Length = 639
Score = 136 (52.9 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 590 ISLSKGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQ 647
+SL G ++D C++C G LL CD C R +H +C L +IP+G W C CQ
Sbjct: 434 VSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLEPPLKTIPKGMWICPRCQ 493
Query: 648 NMFERK 653
+ +K
Sbjct: 494 DQMLKK 499
>UNIPROTKB|F1MD96 [details] [associations]
symbol:F1MD96 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0016235 "aggresome" evidence=IEA]
[GO:0010369 "chromocenter" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
GO:GO:0005634 GO:GO:0045892 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016235
Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0010369
GeneTree:ENSGT00530000062982 OMA:HMENERA EMBL:DAAA02040745
EMBL:DAAA02040746 IPI:IPI01003121 Ensembl:ENSBTAT00000027831
Uniprot:F1MD96
Length = 1268
Score = 151 (58.2 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 36/102 (35%), Positives = 58/102 (56%)
Query: 594 KGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKEC--ASLSSIPQGDWYCKYCQNMFE 651
KG P +N+D C +C +GG LL CD CP+ +H C +L S P GDW C C+++ +
Sbjct: 1013 KGPPVP-IENEDFCAVCLNGGELLCCDRCPKVYHLSCHLPALLSFPGGDWVCTLCRSLTQ 1071
Query: 652 RKRFLQHDA-NA--VEAG-RVS-GVDSVEQITKRCIRIVKNL 688
+ +++D NA + G R G+ +Q K+C ++V +L
Sbjct: 1072 PE--VEYDCENARFSQPGVRAPPGLSIYDQ--KKCEKLVLSL 1109
Score = 48 (22.0 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 16/71 (22%), Positives = 35/71 (49%)
Query: 59 KRSRFSNSDDLLEDDVIDKRINSKIHEGRINK---VVKNVLNE--NGI---LESVVEEEN 110
K+S S +ED + + + + E +I V+ N LN+ NG+ LE + E
Sbjct: 144 KKSSLQTSAKQIEDRIFEVKHQHRKVENQIKMAKMVLMNELNKQANGLIEELEGITNERK 203
Query: 111 QLVQMTVENVI 121
+ ++ +++++
Sbjct: 204 RKLEQQLQSIM 214
Score = 39 (18.8 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 286 ACKQYRRASQYICFENG 302
A +QYR +Y FE G
Sbjct: 874 ALQQYRSPKEYENFEQG 890
Score = 38 (18.4 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 5/23 (21%), Positives = 18/23 (78%)
Query: 468 SQRQRKITKKSKKTVLISKPFEN 490
++R+RK+ ++ + +++++ FE+
Sbjct: 200 NERKRKLEQQLQSIMVLNRQFEH 222
>UNIPROTKB|F1P5P6 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003682 GO:GO:0000122 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0000118
GeneTree:ENSGT00530000063984 EMBL:AADN02033506 EMBL:AADN02033505
IPI:IPI00574652 Ensembl:ENSGALT00000013689 ArrayExpress:F1P5P6
Uniprot:F1P5P6
Length = 651
Score = 136 (52.9 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 590 ISLSKGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQ 647
+SL G ++D C++C G LL CD C R +H +C L +IP+G W C CQ
Sbjct: 446 VSLPSPSSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPKCQ 505
Query: 648 NMFERK 653
+ +K
Sbjct: 506 DQMLKK 511
>MGI|MGI:2384756 [details] [associations]
symbol:Phf21a "PHD finger protein 21A" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0001967 "suckling
behavior" evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 MGI:MGI:2384756 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0001967 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 CTD:51317
eggNOG:NOG310379 HOVERGEN:HBG080293 EMBL:AB105178 EMBL:AK129424
EMBL:AK037174 EMBL:BC019181 EMBL:AY206982 IPI:IPI00124469
IPI:IPI00228265 IPI:IPI00453806 IPI:IPI00742280 IPI:IPI00742299
IPI:IPI00742330 IPI:IPI00742344 IPI:IPI00742352 IPI:IPI00742439
RefSeq:NP_001103161.1 RefSeq:NP_620094.2 UniGene:Mm.330408
ProteinModelPortal:Q6ZPK0 SMR:Q6ZPK0 STRING:Q6ZPK0
PhosphoSite:Q6ZPK0 PRIDE:Q6ZPK0 GeneID:192285 KEGG:mmu:192285
UCSC:uc008kxi.2 HOGENOM:HOG000231466 ChiTaRS:PHF21A NextBio:371282
CleanEx:MM_PHF21A Genevestigator:Q6ZPK0
GermOnline:ENSMUSG00000058318 Uniprot:Q6ZPK0
Length = 659
Score = 136 (52.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 590 ISLSKGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQ 647
+SL G ++D C++C G LL CD C R +H +C L +IP+G W C CQ
Sbjct: 454 VSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLEPPLKTIPKGMWICPRCQ 513
Query: 648 NMFERK 653
+ +K
Sbjct: 514 DQMLKK 519
>UNIPROTKB|F1PQV6 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:SCTVNCN GeneTree:ENSGT00530000063984
EMBL:AAEX03011503 EMBL:AAEX03011502 Ensembl:ENSCAFT00000014853
Uniprot:F1PQV6
Length = 680
Score = 136 (52.9 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 590 ISLSKGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQ 647
+SL G ++D C++C G LL CD C R +H +C L +IP+G W C CQ
Sbjct: 474 VSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQ 533
Query: 648 NMFERK 653
+ +K
Sbjct: 534 DQMLKK 539
>UNIPROTKB|Q96BD5 [details] [associations]
symbol:PHF21A "PHD finger protein 21A" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0001967 "suckling behavior"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007596 "blood coagulation" evidence=TAS] Reactome:REACT_604
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016
SMART:SM00184 SMART:SM00249 SMART:SM00384 EMBL:CH471064
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0007596
GO:GO:0008270 GO:GO:0001967 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0000118 EMBL:AY090777 EMBL:AB051483
EMBL:AK021530 EMBL:AK023258 EMBL:BC015714 EMBL:BX648236
EMBL:AF208848 IPI:IPI00041959 IPI:IPI00054460 IPI:IPI00737174
RefSeq:NP_001095272.1 RefSeq:NP_057705.3 UniGene:Hs.502458 PDB:2PUY
PDB:2YQL PDBsum:2PUY PDBsum:2YQL ProteinModelPortal:Q96BD5
SMR:Q96BD5 IntAct:Q96BD5 MINT:MINT-1469147 STRING:Q96BD5
PhosphoSite:Q96BD5 DMDM:74731224 PaxDb:Q96BD5 PRIDE:Q96BD5
DNASU:51317 Ensembl:ENST00000257821 Ensembl:ENST00000323180
Ensembl:ENST00000418153 GeneID:51317 KEGG:hsa:51317 UCSC:uc001ncb.4
UCSC:uc001ncc.4 UCSC:uc001nce.2 CTD:51317 GeneCards:GC11M045950
HGNC:HGNC:24156 HPA:HPA023580 MIM:608325 neXtProt:NX_Q96BD5
PharmGKB:PA134977844 eggNOG:NOG310379 HOVERGEN:HBG080293
InParanoid:Q96BD5 OMA:SCTVNCN OrthoDB:EOG4KWJSH PhylomeDB:Q96BD5
EvolutionaryTrace:Q96BD5 GenomeRNAi:51317 NextBio:54681
ArrayExpress:Q96BD5 Bgee:Q96BD5 CleanEx:HS_PHF21A
Genevestigator:Q96BD5 GermOnline:ENSG00000135365 Uniprot:Q96BD5
Length = 680
Score = 136 (52.9 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 590 ISLSKGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQ 647
+SL G ++D C++C G LL CD C R +H +C L +IP+G W C CQ
Sbjct: 474 VSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQ 533
Query: 648 NMFERK 653
+ +K
Sbjct: 534 DQMLKK 539
>RGD|1311923 [details] [associations]
symbol:Chd3 "chromodomain helicase DNA binding protein 3"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005813 "centrosome" evidence=ISO]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISO]
[GO:0007051 "spindle organization" evidence=ISO] [GO:0016581 "NuRD
complex" evidence=ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=ISO] [GO:0051297 "centrosome organization"
evidence=ISO] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326
IPI:IPI00369880 EMBL:AY903245 EMBL:AY903246 UniGene:Rn.232095
STRING:Q2KML1 UCSC:RGD:1311923 Genevestigator:Q2KML1 Uniprot:Q2KML1
Length = 1925
Score = 140 (54.3 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 32/109 (29%), Positives = 50/109 (45%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQNMFERKRFLQHD 659
D+ D C +C GG ++ CD CPRA+H C L P+G W C +C+ + + +
Sbjct: 334 DHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQWEAKEEE 393
Query: 660 ANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGF 708
+ E G + + + C R+ K+ G LLC CD S +
Sbjct: 394 EDYEEEGEEGEKEEEDDHMEYC-RVCKD-----GGELLC--CDACISSY 434
>RGD|1307955 [details] [associations]
symbol:Whsc1 "Wolf-Hirschhorn syndrome candidate 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003149 "membranous septum morphogenesis" evidence=ISO]
[GO:0003289 "atrial septum primum morphogenesis" evidence=ISO]
[GO:0003290 "atrial septum secundum morphogenesis" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0016568 "chromatin modification" evidence=ISO]
[GO:0018022 "peptidyl-lysine methylation" evidence=ISO] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=ISO] [GO:0034968 "histone
lysine methylation" evidence=ISO] [GO:0060348 "bone development"
evidence=ISO] REFSEQ:NM_001191552 Ncbi:NP_001178481
Length = 1346
Score = 140 (54.3 bits), Expect = 4.4e-05, Sum P(4) = 4.4e-05
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 594 KGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQ 647
KG+++ N C +C+ GG+LL C+ CP AFH +C S+ +P G W+C C+
Sbjct: 802 KGKRHHTHVNVSWCFVCSKGGSLLCCEACPAAFHPDCLSIE-MPDGSWFCNDCR 854
Score = 59 (25.8 bits), Expect = 4.4e-05, Sum P(4) = 4.4e-05
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 713 ILLCDQ--CEREFHVGCLKKHKMADLRELPKGKWFC 746
++LCD+ C + +H+ CL L + P GKW C
Sbjct: 1232 LVLCDRKFCTKAYHLSCL------GLGKRPFGKWEC 1261
Score = 43 (20.2 bits), Expect = 4.4e-05, Sum P(4) = 4.4e-05
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 56 SRVKRSRFSNSDDLLEDDVIDKRINSKIHEGRINKV 91
+R R R D LLE +++ + SKI K+
Sbjct: 145 TRRNRKRSIKYDSLLEQGLVEAALVSKISSPEDKKI 180
Score = 39 (18.8 bits), Expect = 4.4e-05, Sum P(4) = 4.4e-05
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 194 EVEAIAEGSALTSPKKNLELKMSKKIS 220
+ E + + SA +P K ++K+ K IS
Sbjct: 269 QFEKLCQESAKQAPTKAEKIKLLKPIS 295
>UNIPROTKB|F1S3C1 [details] [associations]
symbol:NSD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050681 "androgen receptor binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 GO:GO:0005634
GO:GO:0045893 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682
GO:GO:0001702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0003712 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 OMA:NIDKMRH
EMBL:CU915382 Ensembl:ENSSSCT00000015341 Uniprot:F1S3C1
Length = 2394
Score = 152 (58.6 bits), Expect = 4.4e-05, Sum P(5) = 4.4e-05
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQ 647
N C +C++GG+LL CD CP AFH+EC ++ IP+G+WYC C+
Sbjct: 1403 NVSWCFVCSEGGSLLCCDSCPAAFHRECLNID-IPEGNWYCNDCK 1446
Score = 49 (22.3 bits), Expect = 4.4e-05, Sum P(5) = 4.4e-05
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 719 CEREFHVGCLKKHKMADLRELPKGKWFC 746
C + +H CL +L + P GKW C
Sbjct: 1835 CPKVYHADCL------NLTKRPAGKWEC 1856
Score = 47 (21.6 bits), Expect = 4.4e-05, Sum P(5) = 4.4e-05
Identities = 28/144 (19%), Positives = 60/144 (41%)
Query: 105 VVEEENQLVQMTVENVIEETVKGKKAPICKEEPISKVECFPRKEGG--SEVSNGLNKKCL 162
+ E + Q+ + ++ T+ K + + +S P G S + G + L
Sbjct: 409 IAEPGTETSQVNIADLKVSTLVRKPQSDFRNDGLSPKFNTPSSISGDNSLIKGGATNQAL 468
Query: 163 KRPSAMKPKVEPVEVLVTQSEGFG-----NESMSLIEVEAIAEGSALTSPKKNLELKMSK 217
+ +PK+ ++ ++ G NE SL + +GS L S K+ ++ K
Sbjct: 469 LHSKSKQPKIRSIKCKHKENPVVGEPPVANEDCSLKCCSSDTKGSPLASISKSGKMDGLK 528
Query: 218 KIS-LNKKPMTVTELFETGLLDGV 240
+S +++K ++ ET ++ V
Sbjct: 529 LLSNMHEKTRDSNDI-ETAVVKHV 551
Score = 46 (21.3 bits), Expect = 4.4e-05, Sum P(5) = 4.4e-05
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 341 RCKGTFPITCVGKTG-P-GP-LCNSC 363
+C G F + C+G T P G +CN C
Sbjct: 1258 QCCGAFHLECLGLTEMPRGKFICNEC 1283
Score = 46 (21.3 bits), Expect = 4.4e-05, Sum P(5) = 4.4e-05
Identities = 17/54 (31%), Positives = 25/54 (46%)
Query: 447 SSRPGLIANSTPVTSVHKSSQSQRQRKITKKSKKTVLISKPFENASPPLSFPNK 500
S RP L + V + + +S+RQRK TKK ++ + F L P K
Sbjct: 1077 SPRPALESEELLVKTPG-NYESKRQRKPTKKLLESNDLDPGFMPKKGDLGLPKK 1129
Score = 43 (20.2 bits), Expect = 0.00010, Sum P(5) = 0.00010
Identities = 10/42 (23%), Positives = 22/42 (52%)
Query: 81 SKIHEGRINKVVKNVLNENGILESVVEEENQLVQMTVENVIE 122
SK+ +G +V +N +N + + N+L +T+E ++
Sbjct: 718 SKLRDGFSAQVGRNTVNRKALKTERKRKLNRLPAVTLEAALQ 759
Score = 42 (19.8 bits), Expect = 0.00024, Sum P(5) = 0.00024
Identities = 19/65 (29%), Positives = 27/65 (41%)
Query: 121 IEETVKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPVEVLVT 180
+ E +GK IC E CF K+ G +V L C K + V+ V
Sbjct: 1270 LTEMPRGKF--ICNECRTGIHTCFVCKQSGEDVKRCLLPLCGK--FYHEECVQKYPPTVM 1325
Query: 181 QSEGF 185
Q++GF
Sbjct: 1326 QNKGF 1330
Score = 40 (19.1 bits), Expect = 4.4e-05, Sum P(5) = 4.4e-05
Identities = 21/85 (24%), Positives = 35/85 (41%)
Query: 4 ELDYELAGSLDETSTQSLPQAGIQASDCVKAACENV--RCKRFKVTKVN-GFIVYSRVKR 60
E D L G L + S A + CVK+ KR V K + F + +R
Sbjct: 158 EHDLLLNGCLKSLAFDSEHSADEKEKPCVKSRARKSSDNPKRTSVKKGHMQFEAHKEERR 217
Query: 61 SRFSNSDDL--LEDDVIDKRINSKI 83
+ + L + DV DK+ ++++
Sbjct: 218 GKIPENLGLNFISGDVSDKQASNEL 242
>UNIPROTKB|F1LPP7 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 IPI:IPI00369880
Ensembl:ENSRNOT00000057060 Uniprot:F1LPP7
Length = 2020
Score = 140 (54.3 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 32/109 (29%), Positives = 50/109 (45%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQNMFERKRFLQHD 659
D+ D C +C GG ++ CD CPRA+H C L P+G W C +C+ + + +
Sbjct: 429 DHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQWEAKEEE 488
Query: 660 ANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGF 708
+ E G + + + C R+ K+ G LLC CD S +
Sbjct: 489 EDYEEEGEEGEKEEEDDHMEYC-RVCKD-----GGELLC--CDACISSY 529
>RGD|1583154 [details] [associations]
symbol:LOC686349 "similar to Wolf-Hirschhorn syndrome candidate
1 protein isoform 3" species:10116 "Rattus norvegicus" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003149 "membranous septum
morphogenesis" evidence=IEA] [GO:0003289 "atrial septum primum
morphogenesis" evidence=IEA] [GO:0003290 "atrial septum secundum
morphogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0060348 "bone development"
evidence=IEA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 Pfam:PF00505 RGD:1583154
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0031965
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060348 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0003149 GO:GO:0003290 IPI:IPI00779496
Ensembl:ENSRNOT00000021952 OrthoDB:EOG4V6ZFW ArrayExpress:D4A9J4
Uniprot:D4A9J4
Length = 1366
Score = 140 (54.3 bits), Expect = 4.7e-05, Sum P(4) = 4.7e-05
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 594 KGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQ 647
KG+++ N C +C+ GG+LL C+ CP AFH +C S+ +P G W+C C+
Sbjct: 822 KGKRHHTHVNVSWCFVCSKGGSLLCCEACPAAFHPDCLSIE-MPDGSWFCNDCR 874
Score = 59 (25.8 bits), Expect = 4.7e-05, Sum P(4) = 4.7e-05
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 713 ILLCDQ--CEREFHVGCLKKHKMADLRELPKGKWFC 746
++LCD+ C + +H+ CL L + P GKW C
Sbjct: 1252 LVLCDRKFCTKAYHLSCL------GLGKRPFGKWEC 1281
Score = 43 (20.2 bits), Expect = 4.7e-05, Sum P(4) = 4.7e-05
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 56 SRVKRSRFSNSDDLLEDDVIDKRINSKIHEGRINKV 91
+R R R D LLE +++ + SKI K+
Sbjct: 165 TRRNRKRSIKYDSLLEQGLVEAALVSKISSPEDKKI 200
Score = 39 (18.8 bits), Expect = 4.7e-05, Sum P(4) = 4.7e-05
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 194 EVEAIAEGSALTSPKKNLELKMSKKIS 220
+ E + + SA +P K ++K+ K IS
Sbjct: 289 QFEKLCQESAKQAPTKAEKIKLLKPIS 315
>UNIPROTKB|F1M7Q0 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR
IPI:IPI00959834 Ensembl:ENSRNOT00000012983 Uniprot:F1M7Q0
Length = 2054
Score = 140 (54.3 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 32/109 (29%), Positives = 50/109 (45%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQNMFERKRFLQHD 659
D+ D C +C GG ++ CD CPRA+H C L P+G W C +C+ + + +
Sbjct: 429 DHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQWEAKEEE 488
Query: 660 ANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGF 708
+ E G + + + C R+ K+ G LLC CD S +
Sbjct: 489 EDYEEEGEEGEKEEEDDHMEYC-RVCKD-----GGELLC--CDACISSY 529
>UNIPROTKB|J9NVX7 [details] [associations]
symbol:NSD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:AAEX03002967
EMBL:AAEX03002968 EMBL:AAEX03002969 EMBL:AAEX03002970
Ensembl:ENSCAFT00000045272 Uniprot:J9NVX7
Length = 2429
Score = 152 (58.6 bits), Expect = 4.7e-05, Sum P(4) = 4.7e-05
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQ 647
N C +C++GG+LL CD CP AFH+EC ++ IP+G+WYC C+
Sbjct: 1438 NVSWCFVCSEGGSLLCCDSCPAAFHRECLNID-IPEGNWYCNDCK 1481
Score = 49 (22.3 bits), Expect = 4.7e-05, Sum P(4) = 4.7e-05
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 719 CEREFHVGCLKKHKMADLRELPKGKWFC 746
C + +H CL +L + P GKW C
Sbjct: 1870 CPKVYHADCL------NLTKRPAGKWEC 1891
Score = 46 (21.3 bits), Expect = 4.7e-05, Sum P(4) = 4.7e-05
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 341 RCKGTFPITCVGKTG-P-GP-LCNSC 363
+C G F + C+G T P G +CN C
Sbjct: 1293 QCCGAFHLECLGLTEMPRGKFICNEC 1318
Score = 44 (20.5 bits), Expect = 4.7e-05, Sum P(4) = 4.7e-05
Identities = 11/51 (21%), Positives = 25/51 (49%)
Query: 94 NVLNENGILESVVEEENQLVQMTVENVIEET-VKGKKAPICKEEPISKVEC 143
++ +EN +++S + L + + I K K+ P+ E P++ +C
Sbjct: 491 SISSENSLIKSGATNQALLHAKSKQPKIRSIKCKHKENPVVVEPPVTNEDC 541
Score = 42 (19.8 bits), Expect = 7.3e-05, Sum P(4) = 7.3e-05
Identities = 18/81 (22%), Positives = 38/81 (46%)
Query: 49 VNGFIVYSR-VKRSRFSNSDDLLEDDVIDKRINSKIHEGRINKVVKNVLNENGILESVVE 107
V G + R V S S+SD + + + +SK+ + ++ +N LN +
Sbjct: 726 VPGLVSDRRDVPASSKSHSDCVTRRNCGRSKPSSKLRDSFAAQMGRNTLNRKALKTERKR 785
Query: 108 EENQLVQMTVENVIE-ETVKG 127
+ ++L +T+E ++ + V G
Sbjct: 786 KLSRLPAVTLEAALQGDRVSG 806
Score = 42 (19.8 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 19/65 (29%), Positives = 27/65 (41%)
Query: 121 IEETVKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPVEVLVT 180
+ E +GK IC E CF K+ G +V L C K + V+ V
Sbjct: 1305 LTEMPRGKF--ICNECRTGIHTCFVCKQSGEDVKRCLLPLCGK--FYHEECVQKYPPTVM 1360
Query: 181 QSEGF 185
Q++GF
Sbjct: 1361 QNKGF 1365
Score = 41 (19.5 bits), Expect = 9.1e-05, Sum P(4) = 9.1e-05
Identities = 22/96 (22%), Positives = 42/96 (43%)
Query: 151 SEVSNGLNKKCLKRPSAMKPKVEPV-----EVLVTQSEGFGNESMSLIEVEAIAEGSALT 205
S + +G + L + +PK+ + E V NE SL + +GS L
Sbjct: 497 SLIKSGATNQALLHAKSKQPKIRSIKCKHKENPVVVEPPVTNEDCSLKCCSSDTKGSPLA 556
Query: 206 SPKKNLELKMSKKIS-LNKKPMTVTELFETGLLDGV 240
S K+ ++ K +S +++K ++ ET ++ V
Sbjct: 557 SISKSGKVDGLKLLSNMHEKTRDSNDI-ETAVVKHV 591
Score = 41 (19.5 bits), Expect = 0.00014, Sum P(4) = 0.00014
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 447 SSRPGLIANSTPVTSVHKSSQSQRQRKITKK 477
S RP ++ + + + +S+RQRK TKK
Sbjct: 1117 SPRP-ILESEELLVKTPGNYESKRQRKPTKK 1146
>DICTYBASE|DDB_G0282711 [details] [associations]
symbol:DDB_G0282711 "PHD zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 dictyBase:DDB_G0282711 EMBL:AAFI02000047
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 eggNOG:NOG79337 RefSeq:XP_640220.1
ProteinModelPortal:Q54S19 EnsemblProtists:DDB0216408 GeneID:8623760
KEGG:ddi:DDB_G0282711 InParanoid:Q54S19 OMA:EREYNDE Uniprot:Q54S19
Length = 1361
Score = 107 (42.7 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 607 CTICADGG----NLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQNMFERK 653
C +C+ G NL+ C C +HK C + IP+G+WYC C+ ERK
Sbjct: 4 CIVCSKVGQYPLNLVKCYECKSYYHKFCLQSTKIPRGEWYCSSCE--IERK 52
Score = 84 (34.6 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 22/67 (32%), Positives = 31/67 (46%)
Query: 696 LLCRGCDFSKSGFGPRTILLCD--QCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRI 753
L+C C+ K ILLCD C R +H+ CL+ + +PKG W C D R
Sbjct: 321 LVCSSCNTGKD---EDKILLCDTDNCSRGYHMYCLRY----PITSVPKGDWIC--DFCRF 371
Query: 754 NSVLQNL 760
+ +L
Sbjct: 372 GDISADL 378
>ZFIN|ZDB-GENE-040724-145 [details] [associations]
symbol:trim66 "tripartite motif containing 66"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 ZFIN:ZDB-GENE-040724-145
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 GeneTree:ENSGT00530000062982 EMBL:BX323591
IPI:IPI00516161 Ensembl:ENSDART00000076510 Uniprot:F1QYE4
Length = 1119
Score = 149 (57.5 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 30/91 (32%), Positives = 52/91 (57%)
Query: 599 PGKDNDDLCTICADGGNLLPCDGCPRAFHKEC--ASLSSIPQGDWYCKYCQNMFERKRFL 656
P +N+D C +C GG+LL CD CP+ FH C L S P GDW C C+++ + + +
Sbjct: 898 PEIENEDFCAVCLIGGDLLCCDRCPKVFHLSCHVPPLHSFPVGDWICTLCRDVEQPE--V 955
Query: 657 QHDANAVE--AGRVS-GVDSVEQITKRCIRI 684
++D V+ G + G+ + +Q ++C ++
Sbjct: 956 EYDCENVQMSTGTMPYGLSACDQ--RKCEKL 984
Score = 44 (20.5 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 194 EVEAIAEGSALTSPKKNLELKMSKKI---SLNKKPMTVTELFET 234
+++ G +T K ++KM+K I LNK+ + E E+
Sbjct: 137 QIQGRLHGIKITQRKAENQIKMAKMIMMNELNKRANLLIEQLES 180
Score = 41 (19.5 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 268 CSLCNGCRVIPPSKFEIHACKQYRRAS 294
C C + +P KF + RR+S
Sbjct: 330 CLHCRPAQTVPLEKFPAQCAQATRRSS 356
>ASPGD|ASPL0000000577 [details] [associations]
symbol:AN6675 species:162425 "Emericella nidulans"
[GO:0033100 "NuA3 histone acetyltransferase complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016573 "histone acetylation"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 EMBL:BN001301
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 eggNOG:COG5141 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR019542 Pfam:PF10513 OrthoDB:EOG4QNR4V KO:K11380
EMBL:AACD01000111 RefSeq:XP_664279.1 ProteinModelPortal:Q5AYF5
EnsemblFungi:CADANIAT00007460 GeneID:2870462 KEGG:ani:AN6675.2
HOGENOM:HOG000180669 OMA:WTLKREA Uniprot:Q5AYF5
Length = 1173
Score = 137 (53.3 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 25/54 (46%), Positives = 31/54 (57%)
Query: 599 PGKDNDDLCTICADG----GNLLP-CDGCPRAFHKECASLSSIPQGDWYCKYCQ 647
PG+D D C IC DG N + CDGC A H+EC + IP+G W C+ CQ
Sbjct: 424 PGEDQDTKCAICDDGDCENANAIVFCDGCDLAVHQECYGVPFIPEGQWLCRKCQ 477
>ZFIN|ZDB-GENE-050417-474 [details] [associations]
symbol:zgc:113411 "zgc:113411" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000770 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342
PROSITE:PS50016 PROSITE:PS50864 SMART:SM00249 SMART:SM00258
ZFIN:ZDB-GENE-050417-474 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 Gene3D:1.20.920.10 EMBL:BC093591 IPI:IPI00570096
UniGene:Dr.31417 ProteinModelPortal:Q566E8 HOVERGEN:HBG099637
InParanoid:Q566E8 Uniprot:Q566E8
Length = 408
Score = 131 (51.2 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 28/82 (34%), Positives = 40/82 (48%)
Query: 573 PYAHIYTSNGVSLHQLAISLSKGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKECAS 632
P + + LH + ++ NDD+C +C GNL+ CD CPRAFH C
Sbjct: 219 PLGRLIKKKVLELHTINCDCEICQELDQHLNDDVCFVCNSEGNLVCCDECPRAFHHHC-H 277
Query: 633 LSSIPQ---GDWYCKYC--QNM 649
L ++P+ G W C C +NM
Sbjct: 278 LPAVPEDSSGKWSCIICVLKNM 299
>UNIPROTKB|E2RTI2 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:AAEX03003635
EMBL:AAEX03003636 Ensembl:ENSCAFT00000026729 Uniprot:E2RTI2
Length = 1998
Score = 139 (54.0 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 34/110 (30%), Positives = 49/110 (44%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQNMFERKRF-LQH 658
D+ D C +C GG ++ CD CPRA+H C L P+G W C +C+ E ++ +
Sbjct: 376 DHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEK--EGVQWEAKE 433
Query: 659 DANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGF 708
+ E G G E R+ K+ G LLC CD S +
Sbjct: 434 EEEEYEEGEEEGEKEEEDDHMEYCRVCKD-----GGELLC--CDACISSY 476
>WB|WBGene00000482 [details] [associations]
symbol:chd-3 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] [GO:0046580 "negative regulation of Ras protein
signal transduction" evidence=IMP] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0000118 "histone deacetylase
complex" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=TAS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0001709 GO:GO:0046580 GO:GO:0008026 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0000118 GeneTree:ENSGT00560000076896
EMBL:AF308444 EMBL:Z67884 EMBL:Z67881 PIR:T20160 RefSeq:NP_510140.1
UniGene:Cel.16950 ProteinModelPortal:Q22516 SMR:Q22516
STRING:Q22516 PaxDb:Q22516 EnsemblMetazoa:T14G8.1 GeneID:181421
KEGG:cel:CELE_T14G8.1 UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1
HOGENOM:HOG000231124 InParanoid:Q22516 OMA:INIIMEL NextBio:913870
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
Uniprot:Q22516
Length = 1787
Score = 114 (45.2 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 601 KDNDDLCTICADGGNLLPCDGCPRAFHKECA--SLSSIPQGDWYCKYCQ 647
+++ + C +C G L+ CD C RA+H C ++ P+GDW C +C+
Sbjct: 262 ENHQENCEVCNQDGELMLCDTCTRAYHVACIDENMEQPPEGDWSCPHCE 310
Score = 78 (32.5 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 713 ILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CM---DCSRINSVL 757
ILLCD C +H C+ L E+P+G+W C C+ RI +L
Sbjct: 340 ILLCDTCPSSYHAYCIDP----PLTEIPEGEWSCPRCIIPEPAQRIEKIL 385
>UNIPROTKB|Q22516 [details] [associations]
symbol:chd-3 "Chromodomain-helicase-DNA-binding protein 3
homolog" species:6239 "Caenorhabditis elegans" [GO:0032508 "DNA
duplex unwinding" evidence=ISS] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003682 GO:GO:0006338 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0001709 GO:GO:0046580
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598 GO:GO:0000118
GeneTree:ENSGT00560000076896 EMBL:AF308444 EMBL:Z67884 EMBL:Z67881
PIR:T20160 RefSeq:NP_510140.1 UniGene:Cel.16950
ProteinModelPortal:Q22516 SMR:Q22516 STRING:Q22516 PaxDb:Q22516
EnsemblMetazoa:T14G8.1 GeneID:181421 KEGG:cel:CELE_T14G8.1
UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1 HOGENOM:HOG000231124
InParanoid:Q22516 OMA:INIIMEL NextBio:913870 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 Uniprot:Q22516
Length = 1787
Score = 114 (45.2 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 601 KDNDDLCTICADGGNLLPCDGCPRAFHKECA--SLSSIPQGDWYCKYCQ 647
+++ + C +C G L+ CD C RA+H C ++ P+GDW C +C+
Sbjct: 262 ENHQENCEVCNQDGELMLCDTCTRAYHVACIDENMEQPPEGDWSCPHCE 310
Score = 78 (32.5 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 713 ILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CM---DCSRINSVL 757
ILLCD C +H C+ L E+P+G+W C C+ RI +L
Sbjct: 340 ILLCDTCPSSYHAYCIDP----PLTEIPEGEWSCPRCIIPEPAQRIEKIL 385
>FB|FBgn0023097 [details] [associations]
symbol:bon "bonus" species:7227 "Drosophila melanogaster"
[GO:0003713 "transcription coactivator activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0007422 "peripheral
nervous system development" evidence=TAS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0048666
"neuron development" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 GO:GO:0005634 GO:GO:0007411
GO:GO:0046872 GO:GO:0008270 GO:GO:0007422 GO:GO:0003682
GO:GO:0048813 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0006325 Gene3D:1.20.920.10 SUPFAM:SSF47370
HSSP:Q9UIG0 FlyBase:FBgn0023097 EMBL:AF210315
ProteinModelPortal:Q9U3Y7 SMR:Q9U3Y7 STRING:Q9U3Y7 PRIDE:Q9U3Y7
InParanoid:Q9U3Y7 OrthoDB:EOG48KPS6 ArrayExpress:Q9U3Y7 Bgee:Q9U3Y7
Uniprot:Q9U3Y7
Length = 1133
Score = 140 (54.3 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 28/95 (29%), Positives = 49/95 (51%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKEC--ASLSSIPQGD--WYCKYCQNMFERKRFLQH 658
N+D C +C DGG L+ CD CP+ FH+ C ++SS+P W C C N+ E +
Sbjct: 896 NEDWCAVCLDGGELMCCDKCPKVFHQNCHIPAISSLPDESESWQCLLCVNIKELTK--TE 953
Query: 659 DANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELS 693
+ +G +S ++ + + + C+ + E L+
Sbjct: 954 GSEKSSSGELSALE-LRILQRICLELYCQYEQSLN 987
Score = 47 (21.6 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 10/47 (21%), Positives = 21/47 (44%)
Query: 441 WELTRNSSRPGLIANSTPVTSVHKSSQSQRQRKITKKSKKTVLISKP 487
W + +++ + + + P+ Q+ KI+ KS T+ S P
Sbjct: 727 WHIPQSAQQSNMCSQQGPLLPFANGRQTSENFKISLKSPNTLKNSTP 773
>UNIPROTKB|E2R3Q9 [details] [associations]
symbol:NSD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 CTD:64324
KO:K15588 OMA:NIDKMRH EMBL:AAEX03002967 EMBL:AAEX03002968
EMBL:AAEX03002969 EMBL:AAEX03002970 RefSeq:XP_865778.1
Ensembl:ENSCAFT00000026110 GeneID:489094 KEGG:cfa:489094
Uniprot:E2R3Q9
Length = 2698
Score = 152 (58.6 bits), Expect = 7.1e-05, Sum P(4) = 7.1e-05
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQ 647
N C +C++GG+LL CD CP AFH+EC ++ IP+G+WYC C+
Sbjct: 1707 NVSWCFVCSEGGSLLCCDSCPAAFHRECLNID-IPEGNWYCNDCK 1750
Score = 49 (22.3 bits), Expect = 7.1e-05, Sum P(4) = 7.1e-05
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 719 CEREFHVGCLKKHKMADLRELPKGKWFC 746
C + +H CL +L + P GKW C
Sbjct: 2139 CPKVYHADCL------NLTKRPAGKWEC 2160
Score = 46 (21.3 bits), Expect = 7.1e-05, Sum P(4) = 7.1e-05
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 341 RCKGTFPITCVGKTG-P-GP-LCNSC 363
+C G F + C+G T P G +CN C
Sbjct: 1562 QCCGAFHLECLGLTEMPRGKFICNEC 1587
Score = 44 (20.5 bits), Expect = 7.1e-05, Sum P(4) = 7.1e-05
Identities = 11/51 (21%), Positives = 25/51 (49%)
Query: 94 NVLNENGILESVVEEENQLVQMTVENVIEET-VKGKKAPICKEEPISKVEC 143
++ +EN +++S + L + + I K K+ P+ E P++ +C
Sbjct: 760 SISSENSLIKSGATNQALLHAKSKQPKIRSIKCKHKENPVVVEPPVTNEDC 810
Score = 42 (19.8 bits), Expect = 0.00011, Sum P(4) = 0.00011
Identities = 18/81 (22%), Positives = 38/81 (46%)
Query: 49 VNGFIVYSR-VKRSRFSNSDDLLEDDVIDKRINSKIHEGRINKVVKNVLNENGILESVVE 107
V G + R V S S+SD + + + +SK+ + ++ +N LN +
Sbjct: 995 VPGLVSDRRDVPASSKSHSDCVTRRNCGRSKPSSKLRDSFAAQMGRNTLNRKALKTERKR 1054
Query: 108 EENQLVQMTVENVIE-ETVKG 127
+ ++L +T+E ++ + V G
Sbjct: 1055 KLSRLPAVTLEAALQGDRVSG 1075
Score = 42 (19.8 bits), Expect = 0.00027, Sum P(4) = 0.00027
Identities = 19/65 (29%), Positives = 27/65 (41%)
Query: 121 IEETVKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPVEVLVT 180
+ E +GK IC E CF K+ G +V L C K + V+ V
Sbjct: 1574 LTEMPRGKF--ICNECRTGIHTCFVCKQSGEDVKRCLLPLCGK--FYHEECVQKYPPTVM 1629
Query: 181 QSEGF 185
Q++GF
Sbjct: 1630 QNKGF 1634
Score = 41 (19.5 bits), Expect = 0.00014, Sum P(4) = 0.00014
Identities = 22/96 (22%), Positives = 42/96 (43%)
Query: 151 SEVSNGLNKKCLKRPSAMKPKVEPV-----EVLVTQSEGFGNESMSLIEVEAIAEGSALT 205
S + +G + L + +PK+ + E V NE SL + +GS L
Sbjct: 766 SLIKSGATNQALLHAKSKQPKIRSIKCKHKENPVVVEPPVTNEDCSLKCCSSDTKGSPLA 825
Query: 206 SPKKNLELKMSKKIS-LNKKPMTVTELFETGLLDGV 240
S K+ ++ K +S +++K ++ ET ++ V
Sbjct: 826 SISKSGKVDGLKLLSNMHEKTRDSNDI-ETAVVKHV 860
Score = 41 (19.5 bits), Expect = 0.00021, Sum P(4) = 0.00021
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 447 SSRPGLIANSTPVTSVHKSSQSQRQRKITKK 477
S RP ++ + + + +S+RQRK TKK
Sbjct: 1386 SPRP-ILESEELLVKTPGNYESKRQRKPTKK 1415
Score = 39 (18.8 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 8/42 (19%), Positives = 23/42 (54%)
Query: 448 SRPGLIANS-TPVTSVHKSSQSQRQRKITKKSKKTVLISKPF 488
SR G + + P+ ++ +++++ ++ ++K L+ PF
Sbjct: 217 SRHGAVKSPFLPLAPQTETQKNKQRNEVDGSNEKAALLPAPF 258
>UNIPROTKB|F1MP49 [details] [associations]
symbol:TRIM24 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071391 "cellular response to estrogen stimulus"
evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] [GO:0070562 "regulation of vitamin D receptor
signaling pathway" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0034056 "estrogen response element binding" evidence=IEA]
[GO:0031647 "regulation of protein stability" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005726 "perichromatin
fibrils" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0002039 "p53
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0045893 GO:GO:0008285 GO:GO:0042981
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0046777
GO:GO:0003682 GO:GO:0004672 GO:GO:0031647 GO:GO:0030163
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0005719
GO:GO:0004842 GO:GO:0055074 InterPro:IPR017907 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071391
GO:GO:0034056 GO:GO:0070562 GO:GO:0005726 OMA:FWAQNIF
GeneTree:ENSGT00530000062982 EMBL:DAAA02011697 EMBL:DAAA02011696
IPI:IPI01000481 Ensembl:ENSBTAT00000003151 Uniprot:F1MP49
Length = 1053
Score = 148 (57.2 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 29/90 (32%), Positives = 50/90 (55%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKEC--ASLSSIPQGDWYCKYCQNMFERKRFLQHDA 660
N+D C +C +GG LL C+ CP+ FH C +L++ P G+W C +C+++ K +++D
Sbjct: 828 NEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLANFPSGEWICTFCRDL--SKPEVEYDC 885
Query: 661 NAV----EAGRVSGVDSVEQITKR-CIRIV 685
+ E + G + I KR C R++
Sbjct: 886 DVPVHNSEKRKTEGFVKLTPIDKRKCERLL 915
Score = 38 (18.4 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 15/76 (19%), Positives = 27/76 (35%)
Query: 318 PMLKATLQSALSSLPEEKSFACVRCKGTFPITCVGKTGPGPLCNSCVKSKKPQGTMTYTT 377
P + T + A+ P + +F + P + P + S T+T
Sbjct: 541 PSNQNTPRQAMKPNPLQMAFLAQQAIKQLPQWQISSGHAAPSTANSTSSTPSSPTITSAA 600
Query: 378 GIRIRASGPKLVSRSS 393
G +A G ++ SS
Sbjct: 601 GYDAKAFGSPVIDLSS 616
>UNIPROTKB|O96028 [details] [associations]
symbol:WHSC1 "Histone-lysine N-methyltransferase NSD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003149 "membranous
septum morphogenesis" evidence=IEA] [GO:0003289 "atrial septum
primum morphogenesis" evidence=IEA] [GO:0003290 "atrial septum
secundum morphogenesis" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0060348 "bone development" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0009653 "anatomical structure morphogenesis"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 Pfam:PF00855 Pfam:PF00505 GO:GO:0005737 GO:GO:0005694
GO:GO:0005730 EMBL:CH471131 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0031965 GO:GO:0006351 GO:GO:0003682
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0009653 GO:GO:0060348 eggNOG:COG2940
GO:GO:0018024 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:AL132868
GO:GO:0003149 GO:GO:0003290 Orphanet:280 KO:K11424 EMBL:AF071593
EMBL:AF071594 EMBL:AF083386 EMBL:AF083387 EMBL:AF083388
EMBL:AF083389 EMBL:AF083390 EMBL:AF083391 EMBL:AF178206
EMBL:AF178199 EMBL:AF178198 EMBL:AF178202 EMBL:AF178204
EMBL:AF178205 EMBL:AF178203 EMBL:AF178201 EMBL:AF178200
EMBL:AF178219 EMBL:AF178207 EMBL:AF178216 EMBL:AF178215
EMBL:AF178214 EMBL:AF178213 EMBL:AF178212 EMBL:AF178211
EMBL:AF178210 EMBL:AF178209 EMBL:AF178208 EMBL:AF178218
EMBL:AF178217 EMBL:AF330040 EMBL:AY694128 EMBL:AJ007042
EMBL:AB029013 EMBL:AK289697 EMBL:AC105448 EMBL:BC052254
EMBL:BC070176 EMBL:BC094825 EMBL:BC141815 EMBL:BC152412
IPI:IPI00107486 IPI:IPI00107487 IPI:IPI00218240 IPI:IPI00334604
IPI:IPI00470433 IPI:IPI00790144 IPI:IPI00792674
RefSeq:NP_001035889.1 RefSeq:NP_015627.1 RefSeq:NP_579877.1
RefSeq:NP_579878.1 RefSeq:NP_579889.1 RefSeq:NP_579890.1
UniGene:Hs.113876 HSSP:Q9BYU8 ProteinModelPortal:O96028 SMR:O96028
IntAct:O96028 MINT:MINT-7103764 STRING:O96028 PhosphoSite:O96028
PaxDb:O96028 PRIDE:O96028 DNASU:7468 Ensembl:ENST00000312087
Ensembl:ENST00000353275 Ensembl:ENST00000382888
Ensembl:ENST00000382891 Ensembl:ENST00000382892
Ensembl:ENST00000382895 Ensembl:ENST00000398261
Ensembl:ENST00000420906 Ensembl:ENST00000436793
Ensembl:ENST00000503128 Ensembl:ENST00000508803
Ensembl:ENST00000512700 Ensembl:ENST00000514045 GeneID:7468
KEGG:hsa:7468 UCSC:uc003gdx.3 UCSC:uc003gdy.1 UCSC:uc003gdz.4
UCSC:uc003geg.1 UCSC:uc003geh.1 UCSC:uc003gei.4 CTD:7468
GeneCards:GC04P001840 HGNC:HGNC:12766 HPA:HPA015315 HPA:HPA015801
MIM:602952 neXtProt:NX_O96028 PharmGKB:PA37369 HOVERGEN:HBG053345
InParanoid:O96028 OMA:DVKRCVV ChiTaRS:WHSC1 GenomeRNAi:7468
NextBio:29246 ArrayExpress:O96028 Bgee:O96028 Genevestigator:O96028
GermOnline:ENSG00000109685 Uniprot:O96028
Length = 1365
Score = 139 (54.0 bits), Expect = 7.3e-05, Sum P(4) = 7.3e-05
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 594 KGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQ 647
KG+++ N C +C+ GG+LL C+ CP AFH +C ++ +P G W+C C+
Sbjct: 821 KGKRHHAHVNVSWCFVCSKGGSLLCCESCPAAFHPDCLNIE-MPDGSWFCNDCR 873
Score = 59 (25.8 bits), Expect = 7.3e-05, Sum P(4) = 7.3e-05
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 713 ILLCDQ--CEREFHVGCLKKHKMADLRELPKGKWFC 746
++LCD+ C + +H+ CL L + P GKW C
Sbjct: 1251 LVLCDRKFCTKAYHLSCL------GLGKRPFGKWEC 1280
Score = 42 (19.8 bits), Expect = 7.3e-05, Sum P(4) = 7.3e-05
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 56 SRVKRSRFSNSDDLLEDDVIDKRINSKIHEGRINKV 91
+R R R D LLE +++ + SKI K+
Sbjct: 165 ARRNRKRSIKYDSLLEQGLVEAALVSKISSPSDKKI 200
Score = 39 (18.8 bits), Expect = 7.3e-05, Sum P(4) = 7.3e-05
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 194 EVEAIAEGSALTSPKKNLELKMSKKIS 220
+ E + + SA +P K ++K+ K IS
Sbjct: 289 QFEKLCQESAKQAPTKAEKIKLLKPIS 315
>UNIPROTKB|E1BM66 [details] [associations]
symbol:NSD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050681 "androgen receptor binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 GO:GO:0005634 GO:GO:0045893 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0003712
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 OMA:NIDKMRH EMBL:DAAA02020051 EMBL:DAAA02020048
EMBL:DAAA02020049 EMBL:DAAA02020050 IPI:IPI00716946
Ensembl:ENSBTAT00000034204 Uniprot:E1BM66
Length = 2698
Score = 152 (58.6 bits), Expect = 7.8e-05, Sum P(5) = 7.8e-05
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQ 647
N C +C++GG+LL CD CP AFH+EC ++ IP+G+WYC C+
Sbjct: 1709 NVSWCFVCSEGGSLLCCDSCPAAFHRECLNID-IPEGNWYCNDCK 1752
Score = 49 (22.3 bits), Expect = 7.8e-05, Sum P(5) = 7.8e-05
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 719 CEREFHVGCLKKHKMADLRELPKGKWFC 746
C + +H CL +L + P GKW C
Sbjct: 2141 CPKVYHADCL------NLTKRPAGKWEC 2162
Score = 46 (21.3 bits), Expect = 7.8e-05, Sum P(5) = 7.8e-05
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 341 RCKGTFPITCVGKTG-P-GP-LCNSC 363
+C G F + C+G T P G +CN C
Sbjct: 1564 QCCGAFHLECLGLTEMPRGKFICNEC 1589
Score = 46 (21.3 bits), Expect = 7.8e-05, Sum P(5) = 7.8e-05
Identities = 11/51 (21%), Positives = 25/51 (49%)
Query: 94 NVLNENGILESVVEEENQLVQMTVENVIEET-VKGKKAPICKEEPISKVEC 143
++ +EN I++ + + L + + I K K+ P+ E P++ +C
Sbjct: 760 SISSENSIIKGGAKNQALLHSKSKQPKIRSIKCKHKENPVVAEPPVANEDC 810
Score = 45 (20.9 bits), Expect = 9.7e-05, Sum P(5) = 9.7e-05
Identities = 24/94 (25%), Positives = 44/94 (46%)
Query: 148 EGGSEVSNGLNKKCLKRPSAMKPKVEPVEVLVTQSEGFGNESMSLIEVEAIAEGSALTSP 207
+GG++ L+ K K+P K + E V NE SL + +GS L S
Sbjct: 769 KGGAKNQALLHSKS-KQPKIRSIKCKHKENPVVAEPPVANEDCSLKCCSSDNKGSPLASI 827
Query: 208 KKNLELKMSKKIS-LNKKPMTVTELFETGLLDGV 240
K+ ++ K +S +++K +++ ET ++ V
Sbjct: 828 SKSGKVDGLKLLSNMHEKTRDSSDI-ETAVVKHV 860
Score = 42 (19.8 bits), Expect = 0.00033, Sum P(4) = 0.00033
Identities = 19/65 (29%), Positives = 27/65 (41%)
Query: 121 IEETVKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPVEVLVT 180
+ E +GK IC E CF K+ G +V L C K + V+ V
Sbjct: 1576 LTEMPRGKF--ICNECRTGIHTCFVCKQSGEDVKRCLLPLCGK--FYHEECVQKYPPTVM 1631
Query: 181 QSEGF 185
Q++GF
Sbjct: 1632 QNKGF 1636
Score = 41 (19.5 bits), Expect = 7.8e-05, Sum P(5) = 7.8e-05
Identities = 21/71 (29%), Positives = 27/71 (38%)
Query: 267 SCSLCNGCRVIPPSKFEIHACKQYRRASQYICFENGKSL-LEVLRACRSVPLPMLKATLQ 325
+C C PSKF Q + + N K+L E R +P L+A LQ
Sbjct: 1014 NCVTRRNCGRSKPSKFRDGFSAQMGKNTV-----NRKALKTERRRKLNELPAVTLEAALQ 1068
Query: 326 SALSSLPEEKS 336
S EKS
Sbjct: 1069 GDRESRGSEKS 1079
Score = 41 (19.5 bits), Expect = 0.00014, Sum P(4) = 0.00014
Identities = 10/42 (23%), Positives = 21/42 (50%)
Query: 81 SKIHEGRINKVVKNVLNENGILESVVEEENQLVQMTVENVIE 122
SK +G ++ KN +N + + N+L +T+E ++
Sbjct: 1027 SKFRDGFSAQMGKNTVNRKALKTERRRKLNELPAVTLEAALQ 1068
Score = 40 (19.1 bits), Expect = 0.00069, Sum P(6) = 0.00069
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 447 SSRPGLIANSTPVTSVHKSSQSQRQRKITKK 477
S RP L + V + +S+RQRK TKK
Sbjct: 1385 SPRPALESEELLVKPPG-NYESKRQRKPTKK 1414
Score = 37 (18.1 bits), Expect = 0.00069, Sum P(6) = 0.00069
Identities = 11/32 (34%), Positives = 12/32 (37%)
Query: 357 GPLCNSCVKSKKPQGTMTYTTGIRIRASGPKL 388
GP N C KS M GI P+L
Sbjct: 1234 GPRLNVCDKSNASNEEMEKEPGIPSLTPQPEL 1265
>UNIPROTKB|J9NRN3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 EMBL:AAEX03003895
EMBL:AAEX03003896 EMBL:AAEX03003897 Ensembl:ENSCAFT00000044104
Uniprot:J9NRN3
Length = 1195
Score = 135 (52.6 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 34/109 (31%), Positives = 49/109 (44%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQNMFERKRFLQHD 659
D+ D C +C GG ++ CD CPRA+H C L P+G W C +C+ E ++ D
Sbjct: 315 DHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEK--EGIQWEPKD 372
Query: 660 ANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGF 708
+ E G + E R+ K+ G LLC CD S +
Sbjct: 373 DDDEE--EEGGCEEEEDDHMEFCRVCKD-----GGELLC--CDACPSSY 412
Score = 133 (51.9 bits), Expect = 0.00014, P = 0.00014
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYC 646
D+ + C +C DGG LL CD CP ++H C + L IP G+W C C
Sbjct: 388 DHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRC 434
>UNIPROTKB|F2Z2R5 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 EMBL:AL035406 HGNC:HGNC:16816
ChiTaRS:CHD5 IPI:IPI00444866 ProteinModelPortal:F2Z2R5 SMR:F2Z2R5
Ensembl:ENST00000496404 ArrayExpress:F2Z2R5 Bgee:F2Z2R5
Uniprot:F2Z2R5
Length = 1225
Score = 135 (52.6 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 34/109 (31%), Positives = 49/109 (44%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQNMFERKRFLQHD 659
D+ D C +C GG ++ CD CPRA+H C L P+G W C +C+ E ++ D
Sbjct: 341 DHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEK--EGIQWEPKD 398
Query: 660 ANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGF 708
+ E G + E R+ K+ G LLC CD S +
Sbjct: 399 DDDEE--EEGGCEEEEDDHMEFCRVCKD-----GGELLC--CDACPSSY 438
Score = 133 (51.9 bits), Expect = 0.00015, P = 0.00015
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYC 646
D+ + C +C DGG LL CD CP ++H C + L IP G+W C C
Sbjct: 414 DHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRC 460
>UNIPROTKB|E1C765 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003149 "membranous septum
morphogenesis" evidence=IEA] [GO:0003289 "atrial septum primum
morphogenesis" evidence=IEA] [GO:0003290 "atrial septum secundum
morphogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0031965 "nuclear membrane" evidence=IEA] [GO:0060348 "bone
development" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855 Pfam:PF00505
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0031965
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 OMA:DVKRCVV
EMBL:AADN02014946 IPI:IPI00588925 Ensembl:ENSGALT00000025327
Uniprot:E1C765
Length = 1372
Score = 136 (52.9 bits), Expect = 9.5e-05, Sum P(4) = 9.5e-05
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 594 KGRQYPGKDNDDLCTICA-DGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQ 647
KG+ + N C +C+ +GG+LL C+ CP AFH +C ++ +P G WYC C+
Sbjct: 826 KGKSHHAHVNVSWCFVCSKEGGSLLCCESCPAAFHPDCLNIE-MPDGSWYCNDCR 879
Score = 60 (26.2 bits), Expect = 9.5e-05, Sum P(4) = 9.5e-05
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 702 DFSKSGFGPRTILLCDQ--CEREFHVGCLKKHKMADLRELPKGKWFC 746
D + G G + ++LCD+ C + +H+ CL K R GKW C
Sbjct: 1247 DCFRCGDGGQ-LVLCDRKSCTKAYHLSCLDLAK----RPFVIGKWEC 1288
Score = 43 (20.2 bits), Expect = 9.5e-05, Sum P(4) = 9.5e-05
Identities = 14/71 (19%), Positives = 30/71 (42%)
Query: 57 RVKRSRFSNSDDLLEDDVIDKRINSKIHEGRINKVVKNVLNENGILESVVEEENQLVQMT 116
R R R D LLE +++ + SK NK + ++ +++ L++
Sbjct: 166 RRNRKRSIKYDSLLEQGLVEAALVSKTSSSPENKAPAK---RDSTQSTIKDDKVHLLKYN 222
Query: 117 VENVIEETVKG 127
+ +++ V G
Sbjct: 223 IGDLVWSKVSG 233
Score = 39 (18.8 bits), Expect = 9.5e-05, Sum P(4) = 9.5e-05
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 342 CKGTFPITCVGKTG-PGP--LCNSC 363
C F ++C+G +G P +C+ C
Sbjct: 691 CYRAFHVSCLGLSGRPAGKFVCSEC 715
Score = 39 (18.8 bits), Expect = 0.00023, Sum P(4) = 0.00023
Identities = 14/52 (26%), Positives = 21/52 (40%)
Query: 192 LIEVEAIAEGSALTSPKKNLELKMSKKISLNKK-PMTVTELFETGLLDGVSV 242
L E + A S + E K + K N+K + L E GL++ V
Sbjct: 138 LFESSICGDNGADVSQSEENEQKTTNKERRNRKRSIKYDSLLEQGLVEAALV 189
Score = 38 (18.4 bits), Expect = 0.00012, Sum P(4) = 0.00012
Identities = 18/67 (26%), Positives = 25/67 (37%)
Query: 455 NSTPVTSVHKSSQSQRQRKITKKSKKTVLISKPFENASPPLSFPNKSRWNITPKDQRLHK 514
NST VT ++S SQ+ + TK K AS S + +P
Sbjct: 575 NSTKVT---ETSSSQKNQSATKNLSDACKPLKKRNRASAAESSTLAFSKSSSPSASLTEN 631
Query: 515 LVFDESG 521
+FD G
Sbjct: 632 EIFDGPG 638
Score = 37 (18.1 bits), Expect = 0.00035, Sum P(4) = 0.00035
Identities = 8/42 (19%), Positives = 21/42 (50%)
Query: 65 NSDDLLEDDVIDKRINSKIHEGRINKVVKNVLNENGILESVV 106
N D+ + + +++ +K R + + L E G++E+ +
Sbjct: 147 NGADVSQSEENEQKTTNKERRNRKRSIKYDSLLEQGLVEAAL 188
>UNIPROTKB|H7C4X9 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50865 SMART:SM00249 SMART:SM00297
Pfam:PF00855 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540
EMBL:AL031666 HGNC:HGNC:9397 InterPro:IPR021931 Pfam:PF12064
EMBL:AL390212 ProteinModelPortal:H7C4X9 PRIDE:H7C4X9
Ensembl:ENST00000467200 Uniprot:H7C4X9
Length = 1096
Score = 134 (52.2 bits), Expect = 0.00010, P = 0.00010
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQNM 649
ND C +C G +L C+ CPR +H +C L+S P+GDW+C C+ +
Sbjct: 14 NDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKI 60
>UNIPROTKB|Q9ULU4 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISS] [GO:0070491 "repressing
transcription factor binding" evidence=ISS] [GO:0001106 "RNA
polymerase II transcription corepressor activity" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISS] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR002893 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01753 PROSITE:PS01360
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865 SMART:SM00249
SMART:SM00297 EMBL:U48251 Pfam:PF00855 GO:GO:0005634 EMBL:CH471077
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0001106 Gene3D:1.20.920.10 SUPFAM:SSF47370
eggNOG:COG5076 InterPro:IPR000313 PROSITE:PS50812 GO:GO:0070491
EMBL:AL049540 EMBL:AL022342 EMBL:AF233453 EMBL:AF454056
EMBL:AF273045 EMBL:DQ082998 EMBL:DQ082999 EMBL:DQ368673
EMBL:DQ368674 EMBL:DQ368679 EMBL:DQ368669 EMBL:DQ368670
EMBL:DQ368671 EMBL:AB032951 EMBL:AK299899 EMBL:BX641005
EMBL:AL031666 EMBL:BC030721 IPI:IPI00385321 IPI:IPI00418316
IPI:IPI00640598 IPI:IPI00718938 IPI:IPI00719508 IPI:IPI00741204
IPI:IPI00789719 IPI:IPI00941061 IPI:IPI00946867 IPI:IPI01008745
IPI:IPI01008942 IPI:IPI01008945 IPI:IPI01008959 IPI:IPI01014325
RefSeq:NP_036540.3 RefSeq:NP_898868.1 RefSeq:NP_898869.1
UniGene:Hs.446240 UniGene:Hs.658553 UniGene:Hs.668465
ProteinModelPortal:Q9ULU4 SMR:Q9ULU4 IntAct:Q9ULU4
MINT:MINT-1183677 STRING:Q9ULU4 PhosphoSite:Q9ULU4 DMDM:25453223
PaxDb:Q9ULU4 PRIDE:Q9ULU4 Ensembl:ENST00000311275
Ensembl:ENST00000352431 Ensembl:ENST00000355972
Ensembl:ENST00000360911 Ensembl:ENST00000461685 GeneID:23613
KEGG:hsa:23613 UCSC:uc002xsu.1 UCSC:uc002xsw.1 UCSC:uc002xsx.1
UCSC:uc002xta.1 UCSC:uc002xtb.1 UCSC:uc002xtc.1 UCSC:uc002xtd.1
UCSC:uc002xte.1 UCSC:uc002xtf.1 UCSC:uc010zya.1 CTD:23613
GeneCards:GC20M045837 H-InvDB:HIX0015888 HGNC:HGNC:9397
HPA:HPA020949 neXtProt:NX_Q9ULU4 PharmGKB:PA162409890
HOVERGEN:HBG031823 GenomeRNAi:23613 NextBio:46322
ArrayExpress:Q9ULU4 Bgee:Q9ULU4 CleanEx:HS_ZMYND8
Genevestigator:Q9ULU4 GermOnline:ENSG00000101040 InterPro:IPR021931
Pfam:PF12064 Uniprot:Q9ULU4
Length = 1186
Score = 134 (52.2 bits), Expect = 0.00011, P = 0.00011
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQNM 649
ND C +C G +L C+ CPR +H +C L+S P+GDW+C C+ +
Sbjct: 87 NDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKI 133
>UNIPROTKB|F1MY77 [details] [associations]
symbol:ZMYND8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 OMA:VDNIRRK EMBL:DAAA02036805
IPI:IPI00727342 UniGene:Bt.52435 Ensembl:ENSBTAT00000004258
NextBio:20867417 Uniprot:F1MY77
Length = 1193
Score = 134 (52.2 bits), Expect = 0.00011, P = 0.00011
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQNM 649
ND C +C G +L C+ CPR +H +C L+S P+GDW+C C+ +
Sbjct: 107 NDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKI 153
>ZFIN|ZDB-GENE-041111-187 [details] [associations]
symbol:chd4a "chromodomain helicase DNA binding
protein 4a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-041111-187
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX004850
IPI:IPI00962864 Ensembl:ENSDART00000005453 ArrayExpress:F1QWV5
Bgee:F1QWV5 Uniprot:F1QWV5
Length = 1930
Score = 143 (55.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 35/111 (31%), Positives = 54/111 (48%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQNMFERKRFLQHD 659
D+ D C +C GG ++ CD CPRA+H C + P+G W C +C+ M + + D
Sbjct: 351 DHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGTWSCPHCEKMGIQWE-ARED 409
Query: 660 ANAVEAGRVSGVDSVEQI--TKRCIRIVKNLEAELSGCLLCRGCDFSKSGF 708
A+ E +G ++ E + C R+ K+ G LLC CD S +
Sbjct: 410 ASEGEEDNEAGGEAEEDDHHMEFC-RVCKD-----GGELLC--CDSCPSSY 452
Score = 47 (21.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 30/117 (25%), Positives = 49/117 (41%)
Query: 22 PQAGIQASDCVKAACENVRCKRFKVTKVN--GFIVYSRVKRSRFSNSDDLLEDDVIDKRI 79
P A ++ K + V+ K+ K+ GF KR R S+S+ EDDV D +
Sbjct: 256 PNARKKSKPAPKPQEKKVKTKKVAPLKIKLGGF----NSKRKR-SSSE---EDDV-D--V 304
Query: 80 NSKIHEGRINKV-VKNVLNENGILESVVEEENQLVQMTVENVIEETVKGKKAPICKE 135
+S +G IN V V N N S ++ + + + ET +C++
Sbjct: 305 DSDFDDGSINSVSVSNGSNSRSSRSSAKKKPKKKTKKDEDGDGYETDHQDYCEVCQQ 361
Score = 44 (20.5 bits), Expect = 0.00095, Sum P(3) = 0.00095
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 104 SVVEEENQLVQMTVENVIEETVKGKKAP-ICKEEPISKVECFPRKEGG 150
SV++EE+ L + EN + K KKA +E SK R+E G
Sbjct: 15 SVMQEEDDLEEELSENDAPKVKKKKKAKKSSRESKGSKRNRSRREEIG 62
Score = 42 (19.8 bits), Expect = 0.00095, Sum P(3) = 0.00095
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 455 NSTPVT--SVHKSSQSQRQRKITKKSKK 480
NS V+ S +SS+S ++K KK+KK
Sbjct: 314 NSVSVSNGSNSRSSRSSAKKKPKKKTKK 341
Score = 41 (19.5 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 452 LIANSTP-VTSVHKSSQSQRQRKITKKSK---KTVLISKPFENASPPLSFPNKSR 502
L N P V K+ +S R+ K +K+++ + + IS P P L + R
Sbjct: 27 LSENDAPKVKKKKKAKKSSRESKGSKRNRSRREEIGISSPEPGEGPDLDDGEEDR 81
>UNIPROTKB|F1M0S9 [details] [associations]
symbol:Zmynd8 "Protein Zmynd8" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
RGD:1309544 IPI:IPI00949507 Ensembl:ENSRNOT00000065165
ArrayExpress:F1M0S9 Uniprot:F1M0S9
Length = 1226
Score = 134 (52.2 bits), Expect = 0.00011, P = 0.00011
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQNM 649
ND C +C G +L C+ CPR +H +C L+S P+GDW+C C+ +
Sbjct: 84 NDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKI 130
>WB|WBGene00002637 [details] [associations]
symbol:let-418 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IGI] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0016581 "NuRD complex"
evidence=ISS] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 132 (51.5 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 24/57 (42%), Positives = 32/57 (56%)
Query: 592 LSKGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKECA--SLSSIPQGDWYCKYC 646
L KG + +N+D C C G LL CD CPRA+H C ++ P+GDW C +C
Sbjct: 247 LEKGEE---AENNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHC 300
Score = 69 (29.3 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 18/70 (25%), Positives = 31/70 (44%)
Query: 702 DFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRINSV--LQN 759
+F K +LLCD C FH C+ L E+PK + + C C + ++
Sbjct: 318 EFCKICKETENLLLCDSCVCSFHAYCIDP----PLTEVPKEETWSCPRCETVKPEHKIEK 373
Query: 760 LLVQEAEKLP 769
+L +++P
Sbjct: 374 ILCWRWKEIP 383
Score = 37 (18.1 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 10/42 (23%), Positives = 19/42 (45%)
Query: 63 FSNSDDLLEDDVIDKRINSKIHEGRINKVVKNVLNENGILES 104
F + LEDD++ + + RI + + + G LE+
Sbjct: 202 FIKQQEQLEDDLVKDK-----EDARIKRAAEREEKKKGALEA 238
>UNIPROTKB|G5EBZ4 [details] [associations]
symbol:let-418 "Protein let-418" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 132 (51.5 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 24/57 (42%), Positives = 32/57 (56%)
Query: 592 LSKGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKECA--SLSSIPQGDWYCKYC 646
L KG + +N+D C C G LL CD CPRA+H C ++ P+GDW C +C
Sbjct: 247 LEKGEE---AENNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHC 300
Score = 69 (29.3 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 18/70 (25%), Positives = 31/70 (44%)
Query: 702 DFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRINSV--LQN 759
+F K +LLCD C FH C+ L E+PK + + C C + ++
Sbjct: 318 EFCKICKETENLLLCDSCVCSFHAYCIDP----PLTEVPKEETWSCPRCETVKPEHKIEK 373
Query: 760 LLVQEAEKLP 769
+L +++P
Sbjct: 374 ILCWRWKEIP 383
Score = 37 (18.1 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 10/42 (23%), Positives = 19/42 (45%)
Query: 63 FSNSDDLLEDDVIDKRINSKIHEGRINKVVKNVLNENGILES 104
F + LEDD++ + + RI + + + G LE+
Sbjct: 202 FIKQQEQLEDDLVKDK-----EDARIKRAAEREEKKKGALEA 238
>UNIPROTKB|F5H0X3 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666
IPI:IPI00418316 HGNC:HGNC:9397 InterPro:IPR021931 Pfam:PF12064
EMBL:AL390212 ProteinModelPortal:F5H0X3 SMR:F5H0X3 PRIDE:F5H0X3
Ensembl:ENST00000536340 UCSC:uc010zxy.1 OMA:VDNIRRK
ArrayExpress:F5H0X3 Bgee:F5H0X3 Uniprot:F5H0X3
Length = 1241
Score = 134 (52.2 bits), Expect = 0.00012, P = 0.00012
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQNM 649
ND C +C G +L C+ CPR +H +C L+S P+GDW+C C+ +
Sbjct: 114 NDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKI 160
>RGD|1582725 [details] [associations]
symbol:Chd5 "chromodomain helicase DNA binding protein 5"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1582725 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OrthoDB:EOG4WH8JX
IPI:IPI00948282 Ensembl:ENSRNOT00000067364 UCSC:RGD:1582725
ArrayExpress:D4A5U0 Uniprot:D4A5U0
Length = 1940
Score = 136 (52.9 bits), Expect = 0.00012, P = 0.00012
Identities = 34/109 (31%), Positives = 49/109 (44%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQNMFERKRFLQHD 659
D+ D C +C GG ++ CD CPRA+H C L P+G W C +C+ E ++ D
Sbjct: 339 DHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEK--EGIQWEPKD 396
Query: 660 ANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGF 708
+ E G + E R+ K+ G LLC CD S +
Sbjct: 397 DDEEE--EEGGCEEEEDDHMEFCRVCKD-----GGELLC--CDACPSSY 436
Score = 133 (51.9 bits), Expect = 0.00025, P = 0.00025
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYC 646
D+ + C +C DGG LL CD CP ++H C + L IP G+W C C
Sbjct: 412 DHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRC 458
>UNIPROTKB|F1N7W5 [details] [associations]
symbol:LOC788840 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 OMA:SDKQALG
GeneTree:ENSGT00530000063984 EMBL:DAAA02014921 IPI:IPI00842008
Ensembl:ENSBTAT00000042589 Uniprot:F1N7W5
Length = 501
Score = 129 (50.5 bits), Expect = 0.00012, P = 0.00012
Identities = 23/53 (43%), Positives = 29/53 (54%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQNMFERK 653
+D+LC C G NL PC CPRA+H C L + P+G W C CQ +K
Sbjct: 321 HDELCAACKRGTNLQPCGTCPRAYHLSCLDPPLKTAPKGVWVCPKCQQKALKK 373
>UNIPROTKB|J9NUG7 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR009071 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 Pfam:PF00855 Pfam:PF00505 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:AAEX03002459
Ensembl:ENSCAFT00000043831 Uniprot:J9NUG7
Length = 1359
Score = 139 (54.0 bits), Expect = 0.00014, Sum P(4) = 0.00014
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 594 KGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQ 647
KG+++ N C +C+ GG+LL C+ CP AFH +C ++ +P G W+C C+
Sbjct: 815 KGKRHHAHVNVSWCFVCSKGGSLLCCESCPAAFHPDCLNID-MPDGSWFCNDCR 867
Score = 59 (25.8 bits), Expect = 0.00014, Sum P(4) = 0.00014
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 713 ILLCDQ--CEREFHVGCLKKHKMADLRELPKGKWFC 746
++LCD+ C + +H+ CL L + P GKW C
Sbjct: 1245 LVLCDRKSCTKAYHLSCL------GLGKRPFGKWEC 1274
Score = 39 (18.8 bits), Expect = 0.00014, Sum P(4) = 0.00014
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 194 EVEAIAEGSALTSPKKNLELKMSKKIS 220
+ E + + SA +P K ++K+ K IS
Sbjct: 284 QFEKLCQESAKQAPTKAEKIKLLKPIS 310
Score = 39 (18.8 bits), Expect = 0.00014, Sum P(4) = 0.00014
Identities = 15/72 (20%), Positives = 31/72 (43%)
Query: 56 SRVKRSRFSNSDDLLEDDVIDKRINSKIHEGRINKVVKNVLNENGILESVVEEENQLVQM 115
+R R R D LE +++ + SKI K+ E+ + +++ L++
Sbjct: 160 ARRSRKRSIKYDSFLEQGLVEAALVSKISSPSDKKIAAK--KES--CPNTGRDKDHLLKY 215
Query: 116 TVENVIEETVKG 127
V +++ V G
Sbjct: 216 NVGDLVWSKVSG 227
>UNIPROTKB|F1PK46 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR009071 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 Pfam:PF00855 Pfam:PF00505 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 OMA:DVKRCVV
EMBL:AAEX03002459 Ensembl:ENSCAFT00000023738 Uniprot:F1PK46
Length = 1362
Score = 139 (54.0 bits), Expect = 0.00014, Sum P(4) = 0.00014
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 594 KGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQ 647
KG+++ N C +C+ GG+LL C+ CP AFH +C ++ +P G W+C C+
Sbjct: 818 KGKRHHAHVNVSWCFVCSKGGSLLCCESCPAAFHPDCLNID-MPDGSWFCNDCR 870
Score = 59 (25.8 bits), Expect = 0.00014, Sum P(4) = 0.00014
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 713 ILLCDQ--CEREFHVGCLKKHKMADLRELPKGKWFC 746
++LCD+ C + +H+ CL L + P GKW C
Sbjct: 1248 LVLCDRKSCTKAYHLSCL------GLGKRPFGKWEC 1277
Score = 39 (18.8 bits), Expect = 0.00014, Sum P(4) = 0.00014
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 194 EVEAIAEGSALTSPKKNLELKMSKKIS 220
+ E + + SA +P K ++K+ K IS
Sbjct: 287 QFEKLCQESAKQAPTKAEKIKLLKPIS 313
Score = 39 (18.8 bits), Expect = 0.00014, Sum P(4) = 0.00014
Identities = 15/72 (20%), Positives = 31/72 (43%)
Query: 56 SRVKRSRFSNSDDLLEDDVIDKRINSKIHEGRINKVVKNVLNENGILESVVEEENQLVQM 115
+R R R D LE +++ + SKI K+ E+ + +++ L++
Sbjct: 160 ARRSRKRSIKYDSFLEQGLVEAALVSKISSPSDKKIAAK--KES--CPNTGRDKDHLLKY 215
Query: 116 TVENVIEETVKG 127
V +++ V G
Sbjct: 216 NVGDLVWSKVSG 227
>UNIPROTKB|E2R1M3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:AAEX03003895 EMBL:AAEX03003896 EMBL:AAEX03003897
Ensembl:ENSCAFT00000031086 Uniprot:E2R1M3
Length = 1812
Score = 135 (52.6 bits), Expect = 0.00014, P = 0.00014
Identities = 34/109 (31%), Positives = 49/109 (44%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQNMFERKRFLQHD 659
D+ D C +C GG ++ CD CPRA+H C L P+G W C +C+ E ++ D
Sbjct: 204 DHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEK--EGIQWEPKD 261
Query: 660 ANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGF 708
+ E G + E R+ K+ G LLC CD S +
Sbjct: 262 DDDEE--EEGGCEEEEDDHMEFCRVCKD-----GGELLC--CDACPSSY 301
Score = 133 (51.9 bits), Expect = 0.00023, P = 0.00023
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYC 646
D+ + C +C DGG LL CD CP ++H C + L IP G+W C C
Sbjct: 277 DHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRC 323
>ZFIN|ZDB-GENE-080519-3 [details] [associations]
symbol:nsd1a "nuclear receptor binding SET domain
protein 1a" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 ZFIN:ZDB-GENE-080519-3 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 KO:K15588
EMBL:CU633762 EMBL:CU655965 EMBL:CU659412 IPI:IPI00512787
RefSeq:XP_683890.4 UniGene:Dr.83733 Ensembl:ENSDART00000084114
GeneID:556086 KEGG:dre:556086 CTD:556086 NextBio:20881309
ArrayExpress:F1QA79 Bgee:F1QA79 Uniprot:F1QA79
Length = 2055
Score = 143 (55.4 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 21/45 (46%), Positives = 32/45 (71%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQ 647
N C +C++GG+LL C+ CP AFH+EC ++ +PQG W+C C+
Sbjct: 1389 NVSWCFVCSEGGSLLCCESCPAAFHRECLNIE-MPQGSWFCNDCR 1432
Score = 55 (24.4 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 713 ILLCDQ--CEREFHVGCLKKHKMADLRELPKGKWFC----CMDCSR 752
I+ C + C + +H CL +L + P G+W C C +C R
Sbjct: 1812 IVSCKKPGCPKVYHADCL------NLSKRPAGRWECPWHQCNECGR 1851
Score = 43 (20.2 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 341 RCKGTFPITCVG--KTGPGP-LCNSC 363
+C G F + C+G +T G +C C
Sbjct: 1244 QCCGAFHLQCIGLTETPKGRFICQEC 1269
Score = 42 (19.8 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 20/68 (29%), Positives = 27/68 (39%)
Query: 122 EETVKGKKAPICKEEPISKVECFPRKEGGSEVSNG----LNKKCLKRPSAMKPKVEPVEV 177
+E VKG+ A K+ SK +C R +E + NK K + P P V
Sbjct: 170 DEDVKGEVATF-KDT--SK-KCQKRNVAKTETQSSHRLDANKHSSKNTAKSDPPASPFHV 225
Query: 178 LVTQSEGF 185
T E F
Sbjct: 226 PFTMMEDF 233
>UNIPROTKB|J9P6F3 [details] [associations]
symbol:WHSC1L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 EMBL:AAEX03010393 Ensembl:ENSCAFT00000048373
Uniprot:J9P6F3
Length = 850
Score = 117 (46.2 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 39/144 (27%), Positives = 61/144 (42%)
Query: 591 SLSKGRQYPGKDNDDLCTIC-ADGGNLLPCDG-CPRAFHKECASLSSIPQGDWYCKYCQN 648
SLS+ R D +C IC + G +L+PC+G C + FH EC L+S+P G + C C+
Sbjct: 101 SLSR-RGIGVSKKDTVCQICESSGDSLIPCEGECCKHFHLECLGLASVPDGKFICIECKT 159
Query: 649 MFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSG--CL--LCRGCDFS 704
+ F + + R S + + C+R E G C C C
Sbjct: 160 G-QHPCF-SCKVSGTDVKRCSVGACGKFYHEACVRKFPTAIFESKGFRCPQHCCSACSME 217
Query: 705 KSGF--GPRTILLCDQCEREFHVG 726
K + ++ C +C +H G
Sbjct: 218 KDIYKASKGRMMRCLRCPVAYHSG 241
Score = 64 (27.6 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 713 ILLCDQ--CEREFHVGCLKKHKMADLRELPKGKWFC----CMDCS 751
+++CD+ C + +H+ CL +L + P GKW C C +CS
Sbjct: 746 LVMCDKKDCPKAYHLLCL------NLTQPPYGKWECPWHQCEECS 784
>UNIPROTKB|D5LMF5 [details] [associations]
symbol:zmynd8 "Zinc finger and MYND domain containing
protein 8" species:8355 "Xenopus laevis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50865 SMART:SM00249 SMART:SM00297
Pfam:PF00855 GO:GO:0005634 GO:GO:0007399 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0001106 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 CTD:23613 InterPro:IPR021931
Pfam:PF12064 EMBL:GU942747 RefSeq:NP_001170911.1 UniGene:Xl.18946
GeneID:733267 KEGG:xla:733267 Xenbase:XB-GENE-6253445
Uniprot:D5LMF5
Length = 1165
Score = 132 (51.5 bits), Expect = 0.00018, P = 0.00018
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQNM 649
ND C +C G +L C+ CPR +H +C L++ P+GDW+C C+ +
Sbjct: 127 NDFYCWVCHREGQVLCCELCPRVYHAKCLKLTAEPEGDWFCPECEKI 173
>ZFIN|ZDB-GENE-041119-1 [details] [associations]
symbol:zmynd8 "zinc finger, MYND-type containing 8"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
ZFIN:ZDB-GENE-041119-1 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR000313
PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 EMBL:BX296530 IPI:IPI00512740
Ensembl:ENSDART00000040235 Bgee:E7FBQ3 Uniprot:E7FBQ3
Length = 1201
Score = 132 (51.5 bits), Expect = 0.00018, P = 0.00018
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQNM 649
ND C +C G +L C+ CPR +H +C L++ P+GDW+C C+ +
Sbjct: 108 NDFYCWVCHREGQVLCCELCPRVYHAKCLKLAAEPEGDWFCPECEKI 154
>UNIPROTKB|F1N9E9 [details] [associations]
symbol:Gga.18314 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 EMBL:AADN02028734 EMBL:AADN02028735 EMBL:AADN02028736
EMBL:AADN02028737 EMBL:AADN02028738 EMBL:AADN02028739
EMBL:AADN02028740 EMBL:AADN02028741 EMBL:AADN02028742
EMBL:AADN02028743 EMBL:AADN02070525 IPI:IPI00597924
Ensembl:ENSGALT00000004685 ArrayExpress:F1N9E9 Uniprot:F1N9E9
Length = 2114
Score = 144 (55.7 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 21/45 (46%), Positives = 32/45 (71%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQ 647
N C +C++GG+LL C+ CP AFH+EC ++ +P+G WYC C+
Sbjct: 1310 NVSWCFVCSEGGSLLCCESCPAAFHRECLNIE-MPEGSWYCNDCK 1353
Score = 49 (22.3 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 719 CEREFHVGCLKKHKMADLRELPKGKWFC 746
C + +H CL +L + P GKW C
Sbjct: 1745 CPKVYHADCL------NLTKRPAGKWEC 1766
Score = 45 (20.9 bits), Expect = 0.00063, Sum P(4) = 0.00063
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 461 SVHKSSQSQRQRKITKKSKKTVLISKPFENASPPLSFPNKSRWNITPK 508
S+ + +S+RQRK TKK +L S + A P K W PK
Sbjct: 1001 SIAGNFESKRQRKPTKK----LLESNDLDTAF----MPKKEEWT-PPK 1039
Score = 44 (20.5 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 332 PEEKSFACVRCKGTFPITCVGKTG-P-GP-LCNSC 363
P E +C G F + C+G + P G +CN C
Sbjct: 1156 PGELLLCEAQCCGAFHLQCLGLSEMPTGKFICNEC 1190
Score = 42 (19.8 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 16/54 (29%), Positives = 22/54 (40%)
Query: 132 ICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPVEVLVTQSEGF 185
IC E CF K G +V L C K + ++ VTQ++GF
Sbjct: 1186 ICNECSTGVHTCFVCKNCGQDVKRCLLPLCGKYYH--EECIQKYPPTVTQNKGF 1237
Score = 39 (18.8 bits), Expect = 0.00063, Sum P(4) = 0.00063
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 382 RASGPKLVSRSSENDSMCISYQN 404
R L S++ DS C+S N
Sbjct: 683 RKESVDLTEHSTDEDSACLSDDN 705
Score = 39 (18.8 bits), Expect = 0.00063, Sum P(3) = 0.00063
Identities = 15/52 (28%), Positives = 23/52 (44%)
Query: 464 KSSQSQRQRKITKKSKKTVLISKPFENASPPLSFPNKSRWNITPKDQRLHKL 515
KSS+S+++ ++ KKS SK P S N P+ H+L
Sbjct: 88 KSSESRKRTRV-KKSGMREEASKGEIQEETPESIVNNMIVGDLPEKHASHEL 138
Score = 39 (18.8 bits), Expect = 0.00063, Sum P(3) = 0.00063
Identities = 26/101 (25%), Positives = 39/101 (38%)
Query: 450 PGLIANSTPVTSVHKSSQSQRQRKITKKSKKTVLISKPFENASPPLSFPNKSRWNITPK- 508
P I N+ V + + S R+I K ++ S SF + NIT K
Sbjct: 117 PESIVNNMIVGDLPEKHASHELRRIAK----SITASNSTRENHLLSSFGERRFENITLKS 172
Query: 509 DQRLHKLVFDESGLPDGTEVGYYACGQKLLEGYKNGLGIIC 549
D HK L + + ++ LE K+ LGI+C
Sbjct: 173 DYGSHK----SDALKNTLQGDLFSNAS--LEREKSSLGILC 207
>UNIPROTKB|F1N972 [details] [associations]
symbol:Gga.18314 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0001702 "gastrulation with mouth forming second" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003712
"transcription cofactor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 Pfam:PF00855 GO:GO:0005634 GO:GO:0045893
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0003712
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 EMBL:AADN02028734 EMBL:AADN02028735 EMBL:AADN02028736
EMBL:AADN02028737 EMBL:AADN02028738 EMBL:AADN02028739
EMBL:AADN02028740 EMBL:AADN02028741 EMBL:AADN02028742
EMBL:AADN02028743 EMBL:AADN02070525 IPI:IPI00581947
Ensembl:ENSGALT00000004699 OMA:KYYHEEC ArrayExpress:F1N972
Uniprot:F1N972
Length = 2205
Score = 144 (55.7 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 21/45 (46%), Positives = 32/45 (71%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQ 647
N C +C++GG+LL C+ CP AFH+EC ++ +P+G WYC C+
Sbjct: 1417 NVSWCFVCSEGGSLLCCESCPAAFHRECLNIE-MPEGSWYCNDCK 1460
Score = 49 (22.3 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 719 CEREFHVGCLKKHKMADLRELPKGKWFC 746
C + +H CL +L + P GKW C
Sbjct: 1852 CPKVYHADCL------NLTKRPAGKWEC 1873
Score = 44 (20.5 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 332 PEEKSFACVRCKGTFPITCVGKTG-P-GP-LCNSC 363
P E +C G F + C+G + P G +CN C
Sbjct: 1263 PGELLLCEAQCCGAFHLQCLGLSEMPTGKFICNEC 1297
Score = 42 (19.8 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 16/54 (29%), Positives = 22/54 (40%)
Query: 132 ICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPVEVLVTQSEGF 185
IC E CF K G +V L C K + ++ VTQ++GF
Sbjct: 1293 ICNECSTGVHTCFVCKNCGQDVKRCLLPLCGKYYH--EECIQKYPPTVTQNKGF 1344
Score = 39 (18.8 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 15/52 (28%), Positives = 23/52 (44%)
Query: 464 KSSQSQRQRKITKKSKKTVLISKPFENASPPLSFPNKSRWNITPKDQRLHKL 515
KSS+S+++ ++ KKS SK P S N P+ H+L
Sbjct: 193 KSSESRKRTRV-KKSGMREEASKGEIQEETPESIVNNMIVGDLPEKHASHEL 243
Score = 39 (18.8 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 26/101 (25%), Positives = 39/101 (38%)
Query: 450 PGLIANSTPVTSVHKSSQSQRQRKITKKSKKTVLISKPFENASPPLSFPNKSRWNITPK- 508
P I N+ V + + S R+I K ++ S SF + NIT K
Sbjct: 222 PESIVNNMIVGDLPEKHASHELRRIAK----SITASNSTRENHLLSSFGERRFENITLKS 277
Query: 509 DQRLHKLVFDESGLPDGTEVGYYACGQKLLEGYKNGLGIIC 549
D HK L + + ++ LE K+ LGI+C
Sbjct: 278 DYGSHK----SDALKNTLQGDLFSNAS--LEREKSSLGILC 312
>UNIPROTKB|G4MUP6 [details] [associations]
symbol:MGG_10196 "Bromodomain containing 1" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001965 InterPro:IPR019787 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:CM001232 InterPro:IPR019542
Pfam:PF10513 KO:K11380 RefSeq:XP_003713826.1
ProteinModelPortal:G4MUP6 EnsemblFungi:MGG_10196T0 GeneID:2681768
KEGG:mgr:MGG_10196 Uniprot:G4MUP6
Length = 1217
Score = 129 (50.5 bits), Expect = 0.00039, P = 0.00039
Identities = 24/58 (41%), Positives = 32/58 (55%)
Query: 595 GRQYPGKDNDDLCTICADGG----N-LLPCDGCPRAFHKECASLSSIPQGDWYCKYCQ 647
G G++ D C IC DG N ++ CDGC A H+EC + IP+G W C+ CQ
Sbjct: 429 GETQAGEEQDSKCAICDDGDCENTNAIVFCDGCDLAVHQECYGVPFIPEGQWLCRKCQ 486
>ZFIN|ZDB-GENE-030131-6456 [details] [associations]
symbol:phf21ab "PHD finger protein 21Ab"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0060324
"face development" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00384
ZFIN:ZDB-GENE-030131-6456 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060324
GeneTree:ENSGT00530000063984 EMBL:BX088562 IPI:IPI00499307
UniGene:Dr.80349 Ensembl:ENSDART00000021577 NextBio:20885937
Bgee:E7F750 Uniprot:E7F750
Length = 796
Score = 138 (53.6 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 583 VSLHQLAISLSKGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGD 640
+S+H ++ G ++D CT+C G LL CD C R +H +C L +IP+G
Sbjct: 440 LSVHPHSVPQPSPSSGDGDIHEDFCTVCRRSGQLLMCDTCSRVYHLDCLDPPLKNIPKGM 499
Query: 641 WYCKYCQNMFERK 653
W C CQ+ +K
Sbjct: 500 WICPKCQDQILKK 512
Score = 38 (18.4 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 5/19 (26%), Positives = 15/19 (78%)
Query: 468 SQRQRKITKKSKKTVLISK 486
S++Q+K+ ++ +K +L+ +
Sbjct: 48 SEKQKKVVEQLRKELLVKQ 66
>UNIPROTKB|F1NX82 [details] [associations]
symbol:PHF21B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 OMA:SDKQALG
GeneTree:ENSGT00530000063984 EMBL:AADN02006727 IPI:IPI00584515
Ensembl:ENSGALT00000022994 Uniprot:F1NX82
Length = 447
Score = 132 (51.5 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 29/83 (34%), Positives = 43/83 (51%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQNMFERKRFLQHDA 660
+D+ CT C G NL PC CPRA+H C L + P+G W C CQ ++ L+ D
Sbjct: 265 HDEYCTACKRGVNLQPCGTCPRAYHLNCLDPPLKTAPKGVWVCPKCQ-----QKVLKKDD 319
Query: 661 NAVEAGRVSGVDSVEQITKRCIR 683
N G ++ V S +T + ++
Sbjct: 320 NVPWTGTLAIVHSY--VTHKTVK 340
Score = 37 (18.1 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 449 RPGLIANSTPVTSVHKSSQSQRQRKI-TKK 477
+P LI+ + V + Q+Q + K+ TKK
Sbjct: 141 QPLLISADSKVIIIQPQVQTQTESKVETKK 170
>UNIPROTKB|H0YCN2 [details] [associations]
symbol:RSF1 "Remodeling and spacing factor 1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 EMBL:AP000580
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 EMBL:AP000609
EMBL:AP002343 HGNC:HGNC:18118 ChiTaRS:RSF1 Ensembl:ENST00000526324
Bgee:H0YCN2 Uniprot:H0YCN2
Length = 803
Score = 109 (43.4 bits), Expect = 0.00046, Sum P(3) = 0.00046
Identities = 29/95 (30%), Positives = 41/95 (43%)
Query: 698 CRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMD---CSR 752
C+ C P ILLCD C+ +H CL+ M +P G+WFC C C +
Sbjct: 695 CKKCGLPNH---PELILLCDSCDSGYHTACLRPPLMI----IPDGEWFCPPCQHKLLCEK 747
Query: 753 INSVLQNLLVQEAEKLPEFHLNAIKKYAGNSLETV 787
+ LQ+L V +K Y G S+E +
Sbjct: 748 LEEQLQDLDVALKKKERAERRKERLVYVGISIENI 782
Score = 74 (31.1 bits), Expect = 0.00046, Sum P(3) = 0.00046
Identities = 41/147 (27%), Positives = 65/147 (44%)
Query: 89 NKVVKNVLNENGILESVVEEENQLVQMTVENVIEETVKGKKAPICKEEPISKVECFPRKE 148
N+ NVL E + + E+E +LV++ V +E K P +E+ I K E KE
Sbjct: 65 NRSTANVLEETTVKKEK-EDEKELVKLPVIVKLE-----KPLPENEEKKIIKEESDSFKE 118
Query: 149 GGSEVSNGLNKKCLKRPSAMKPKVE-PVEVLVTQSEGFGNESMSLIEVEAIAEGSALTSP 207
+ + K+C P K +E PV + E FG S E I E S T
Sbjct: 119 NVKPIKVEV-KECRADPKDTKSSMEKPVAQEPERIE-FGGNIKSSHE---ITEKS--TEE 171
Query: 208 KKNLELKMSKKISLNKKPMTVTELFET 234
+ L+ KI L K+ + +++ F++
Sbjct: 172 TEKLKNDQQAKIPLKKREIKLSDDFDS 198
Score = 38 (18.4 bits), Expect = 0.00046, Sum P(3) = 0.00046
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 361 NSCVKSKKPQGTMTYTTGIRIR 382
NS V KP+G + +T G R R
Sbjct: 632 NSKVSKVKPKGKVRWT-GSRTR 652
>RGD|620289 [details] [associations]
symbol:Trim28 "tripartite motif-containing 28" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000785 "chromatin" evidence=ISO] [GO:0001837 "epithelial to
mesenchymal transition" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;ISS] [GO:0003713
"transcription coactivator activity" evidence=IEA;ISO] [GO:0003714
"transcription corepressor activity" evidence=IEA;ISO] [GO:0004672
"protein kinase activity" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005654 "nucleoplasm"
evidence=IEA;ISO] [GO:0005719 "nuclear euchromatin"
evidence=IEA;ISO] [GO:0005720 "nuclear heterochromatin"
evidence=IEA;ISO] [GO:0006281 "DNA repair" evidence=IEA;ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=ISO] [GO:0008270
"zinc ion binding" evidence=IEA;ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0016925 "protein sumoylation"
evidence=IEA;ISO] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO;ISS] [GO:0045739 "positive regulation of DNA repair"
evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO;ISS]
[GO:0046777 "protein autophosphorylation" evidence=IEA;ISO]
[GO:0051259 "protein oligomerization" evidence=IEA;ISO] [GO:0060028
"convergent extension involved in axis elongation"
evidence=IEA;ISO] [GO:0060669 "embryonic placenta morphogenesis"
evidence=IEA;ISO] [GO:0070087 "chromo shadow domain binding"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 UniPathway:UPA00886
RGD:620289 Prosite:PS00518 GO:GO:0005634 GO:GO:0045893
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0006351
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0001837
Gene3D:1.20.920.10 PROSITE:PS00633 GO:GO:0016925
GeneTree:ENSGT00530000062982 CTD:10155 eggNOG:NOG284491
HOGENOM:HOG000137674 HOVERGEN:HBG055353 KO:K08882 OrthoDB:EOG4320XK
EMBL:BC166843 EMBL:U95041 IPI:IPI00194567 RefSeq:NP_446368.1
UniGene:Rn.198494 ProteinModelPortal:O08629 SMR:O08629
STRING:O08629 PhosphoSite:O08629 PRIDE:O08629
Ensembl:ENSRNOT00000029996 GeneID:116698 KEGG:rno:116698
UCSC:RGD:620289 InParanoid:O08629 NextBio:619598
Genevestigator:O08629 GermOnline:ENSRNOG00000027487 Uniprot:O08629
Length = 835
Score = 104 (41.7 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 27/94 (28%), Positives = 44/94 (46%)
Query: 599 PG--KDNDDLCTICADGGNLLPCDGCPRAFHKEC--ASLSSIPQGDWYCKYCQ---NMFE 651
PG D+ +C +C G+L+ C+ C FH +C SL +P +W C C ++ E
Sbjct: 619 PGILDDSATICRVCQKPGDLVMCNQCEFCFHLDCHLPSLQDVPGEEWSCSLCHVLPDLKE 678
Query: 652 RKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIV 685
L D A G V+ + Q ++C R++
Sbjct: 679 EDGSLSLDG-ADSTGVVAKLSPANQ--RKCERVL 709
Score = 73 (30.8 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 20/74 (27%), Positives = 33/74 (44%)
Query: 326 SALSSLPEEKSFACVRCKGTFPITCVGKTGPGPLCNSCVKSKKPQGTMTYTTGIRIRASG 385
S SS ++ + C C+ P T PLC +CV++ + + YT +R++G
Sbjct: 142 SKASSDSQDANQCCTSCEDNAPATSYCVECSEPLCETCVEAHQ---RVKYTKDHTVRSTG 198
Query: 386 PKLVSRSSENDSMC 399
P +R E C
Sbjct: 199 PAK-TRDGERTVYC 211
>UNIPROTKB|E2QUJ0 [details] [associations]
symbol:WHSC1L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 OMA:MEKDIHK
EMBL:AAEX03010393 Ensembl:ENSCAFT00000009828 Uniprot:E2QUJ0
Length = 1438
Score = 117 (46.2 bits), Expect = 0.00052, Sum P(4) = 0.00052
Identities = 39/144 (27%), Positives = 61/144 (42%)
Query: 591 SLSKGRQYPGKDNDDLCTIC-ADGGNLLPCDG-CPRAFHKECASLSSIPQGDWYCKYCQN 648
SLS+ R D +C IC + G +L+PC+G C + FH EC L+S+P G + C C+
Sbjct: 688 SLSR-RGIGVSKKDTVCQICESSGDSLIPCEGECCKHFHLECLGLASVPDGKFICIECKT 746
Query: 649 MFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSG--CL--LCRGCDFS 704
+ F + + R S + + C+R E G C C C
Sbjct: 747 G-QHPCF-SCKVSGTDVKRCSVGACGKFYHEACVRKFPTAIFESKGFRCPQHCCSACSME 804
Query: 705 KSGF--GPRTILLCDQCEREFHVG 726
K + ++ C +C +H G
Sbjct: 805 KDIYKASKGRMMRCLRCPVAYHSG 828
Score = 64 (27.6 bits), Expect = 0.00052, Sum P(4) = 0.00052
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 713 ILLCDQ--CEREFHVGCLKKHKMADLRELPKGKWFC----CMDCS 751
+++CD+ C + +H+ CL +L + P GKW C C +CS
Sbjct: 1334 LVMCDKKDCPKAYHLLCL------NLTQPPYGKWECPWHQCEECS 1372
Score = 50 (22.7 bits), Expect = 0.00052, Sum P(4) = 0.00052
Identities = 25/87 (28%), Positives = 41/87 (47%)
Query: 60 RSRFSNS--DDLLEDDVIDKRINSKIHEGRINKVVKNVLNENGILESVVEEENQLVQMTV 117
R F +S DLL + + SK HE R K K+ N++ S + +++ ++
Sbjct: 165 RELFESSLCGDLLNEVQASEHTKSK-HESRKEKRKKS--NKHDSCRSEERKSHKIPKLEP 221
Query: 118 E-----NVIEETV--KGKKAPICKEEP 137
E N +TV K ++ P+ KEEP
Sbjct: 222 EEQNRPNERVDTVSEKPREEPVPKEEP 248
Score = 41 (19.5 bits), Expect = 0.00052, Sum P(4) = 0.00052
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 313 RSVPLPMLKATLQSALSSLPEEKSFACVRCK-GTFPITCVGKTGPGPLCNSCVKSKKPQ 370
R P+P + +Q LSS+P + A V+ + G + VG P C+ S PQ
Sbjct: 239 REEPVPKEEPPVQPILSSVPTTEVSAGVKFQVGDLVWSKVGTYPWWP----CMVSSDPQ 293
>ZFIN|ZDB-GENE-030131-4532 [details] [associations]
symbol:chd4b "chromodomain helicase DNA binding
protein 4b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-030131-4532
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX511250
IPI:IPI00931161 RefSeq:XP_685699.4 UniGene:Dr.75373
Ensembl:ENSDART00000092902 Ensembl:ENSDART00000148389 GeneID:560622
KEGG:dre:560622 CTD:560622 NextBio:20883532 Uniprot:F1RBT2
Length = 1953
Score = 145 (56.1 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 42/130 (32%), Positives = 58/130 (44%)
Query: 602 DNDDLCTICADGGNLLPCDGCPRAFHKECAS--LSSIPQGDWYCKYCQNMFERKRFLQHD 659
D+ D C +C GG ++ CD CPRA+H C + P+G W C +C+ K +Q
Sbjct: 373 DHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMERAPEGTWSCPHCE-----KEGIQW- 426
Query: 660 ANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCL-LCRGCDFSKSGFGPRTILLCDQ 718
EA S E R R ++E E + CR C K G G +L CD
Sbjct: 427 ----EAREESSEGEEENDDGR--RDDGDVEEEDDHHMEFCRVC---KDG-GE--LLCCDT 474
Query: 719 CEREFHVGCL 728
C +H+ CL
Sbjct: 475 CPSSYHLHCL 484
Score = 38 (18.4 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 8/34 (23%), Positives = 18/34 (52%)
Query: 457 TPVTSVHKSSQSQRQRKITKKSK---KTVLISKP 487
TP + K ++ R+ + +K+ K + + +S P
Sbjct: 27 TPKSKKKKKAKKSRESRTSKRQKVIREEIAVSSP 60
>UNIPROTKB|F1MWC1 [details] [associations]
symbol:DPF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
Gene3D:3.30.160.60 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
GeneTree:ENSGT00530000063194 EMBL:DAAA02046989 EMBL:DAAA02046990
EMBL:DAAA02046991 EMBL:DAAA02046992 IPI:IPI01024694
Ensembl:ENSBTAT00000009493 ArrayExpress:F1MWC1 Uniprot:F1MWC1
Length = 387
Score = 120 (47.3 bits), Expect = 0.00076, P = 0.00076
Identities = 34/117 (29%), Positives = 51/117 (43%)
Query: 636 IPQGDWYCKYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGC 695
IP G YC +C ++ + + + GR SG S Q T V+ + C
Sbjct: 269 IPNG--YCDFCLGGSKKTGCPEDLISCADCGR-SGHPSCLQFTVNMTAAVRTYRWQ---C 322
Query: 696 LLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSR 752
+ C+ C + +L CD C+R +H+ CL MA E P+G W C + C R
Sbjct: 323 IECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSP-PMA---EPPEGSWSCHL-CLR 374
>MGI|MGI:1352748 [details] [associations]
symbol:Dpf1 "D4, zinc and double PHD fingers family 1"
species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=ISO;IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IDA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
MGI:MGI:1352748 GO:GO:0005737 GO:GO:0007399 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0003676
Gene3D:3.30.160.60 GO:GO:0071565 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS01359 CTD:8193 HOVERGEN:HBG004475 InterPro:IPR025750
Pfam:PF14051 eggNOG:NOG271547 HOGENOM:HOG000217918
OrthoDB:EOG4T4CX1 EMBL:U48238 EMBL:U48239 EMBL:AF108133
IPI:IPI00134511 IPI:IPI00227453 IPI:IPI00227454 RefSeq:NP_038902.1
UniGene:Mm.101885 UniGene:Mm.453136 UniGene:Mm.453137
ProteinModelPortal:Q9QX66 SMR:Q9QX66 STRING:Q9QX66
PhosphoSite:Q9QX66 PRIDE:Q9QX66 Ensembl:ENSMUST00000049977
Ensembl:ENSMUST00000065181 GeneID:29861 KEGG:mmu:29861
GeneTree:ENSGT00530000063194 NextBio:307066 Bgee:Q9QX66
CleanEx:MM_DPF1 Genevestigator:Q9QX66 GermOnline:ENSMUSG00000030584
Uniprot:Q9QX66
Length = 387
Score = 120 (47.3 bits), Expect = 0.00076, P = 0.00076
Identities = 34/117 (29%), Positives = 51/117 (43%)
Query: 636 IPQGDWYCKYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGC 695
IP G YC +C ++ + + + GR SG S Q T V+ + C
Sbjct: 269 IPNG--YCDFCLGGSKKTGCPEDLISCADCGR-SGHPSCLQFTVNMTAAVRTYRWQ---C 322
Query: 696 LLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSR 752
+ C+ C + +L CD C+R +H+ CL MA E P+G W C + C R
Sbjct: 323 IECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSP-PMA---EPPEGSWSCHL-CLR 374
>UNIPROTKB|F1MED1 [details] [associations]
symbol:DPF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
GO:GO:0007399 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:3.30.160.60 GO:GO:0071565 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR025750 Pfam:PF14051 OMA:HAPGQLY
GeneTree:ENSGT00530000063194 EMBL:DAAA02046989 EMBL:DAAA02046990
EMBL:DAAA02046991 EMBL:DAAA02046992 IPI:IPI01024694
Ensembl:ENSBTAT00000054713 ArrayExpress:F1MED1 Uniprot:F1MED1
Length = 388
Score = 120 (47.3 bits), Expect = 0.00077, P = 0.00077
Identities = 34/117 (29%), Positives = 51/117 (43%)
Query: 636 IPQGDWYCKYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGC 695
IP G YC +C ++ + + + GR SG S Q T V+ + C
Sbjct: 270 IPNG--YCDFCLGGSKKTGCPEDLISCADCGR-SGHPSCLQFTVNMTAAVRTYRWQ---C 323
Query: 696 LLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSR 752
+ C+ C + +L CD C+R +H+ CL MA E P+G W C + C R
Sbjct: 324 IECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSP-PMA---EPPEGSWSCHL-CLR 375
>UNIPROTKB|J3KQY6 [details] [associations]
symbol:DPF1 "Zinc finger protein neuro-d4" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
Gene3D:3.30.160.60 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
EMBL:AC011479 HGNC:HGNC:20225 ProteinModelPortal:J3KQY6
Ensembl:ENST00000456296 Uniprot:J3KQY6
Length = 388
Score = 120 (47.3 bits), Expect = 0.00077, P = 0.00077
Identities = 34/117 (29%), Positives = 51/117 (43%)
Query: 636 IPQGDWYCKYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGC 695
IP G YC +C ++ + + + GR SG S Q T V+ + C
Sbjct: 270 IPNG--YCDFCLGGSKKTGCPEDLISCADCGR-SGHPSCLQFTVNMTAAVRTYRWQ---C 323
Query: 696 LLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSR 752
+ C+ C + +L CD C+R +H+ CL MA E P+G W C + C R
Sbjct: 324 IECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSP-PMA---EPPEGSWSCHL-CLR 375
>UNIPROTKB|I3L6G5 [details] [associations]
symbol:DPF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
GO:GO:0007399 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:3.30.160.60 GO:GO:0071565 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR025750 Pfam:PF14051 OMA:HAPGQLY
GeneTree:ENSGT00530000063194 EMBL:FP565378
Ensembl:ENSSSCT00000025066 Uniprot:I3L6G5
Length = 417
Score = 120 (47.3 bits), Expect = 0.00086, P = 0.00086
Identities = 34/117 (29%), Positives = 51/117 (43%)
Query: 636 IPQGDWYCKYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGC 695
IP G YC +C ++ + + + GR SG S Q T V+ + C
Sbjct: 299 IPNG--YCDFCLGGSKKTGCPEDLISCADCGR-SGHPSCLQFTVNMTAAVRTYRWQ---C 352
Query: 696 LLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSR 752
+ C+ C + +L CD C+R +H+ CL MA E P+G W C + C R
Sbjct: 353 IECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSP-PMA---EPPEGSWSCHL-CLR 404
>UNIPROTKB|F1S8S0 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060348 "bone development" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003290 "atrial septum secundum morphogenesis" evidence=IEA]
[GO:0003289 "atrial septum primum morphogenesis" evidence=IEA]
[GO:0003149 "membranous septum morphogenesis" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855 Pfam:PF00505
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0031965
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060348 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0003149 GO:GO:0003290 OMA:DVKRCVV EMBL:FP102229
EMBL:FP102127 Ensembl:ENSSSCT00000009499 Uniprot:F1S8S0
Length = 1361
Score = 139 (54.0 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 594 KGRQYPGKDNDDLCTICADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQ 647
KG+++ N C +C+ GG+LL C+ CP AFH +C ++ +P G W+C C+
Sbjct: 817 KGKRHHAHVNVSWCFVCSKGGSLLCCESCPAAFHPDCLNIE-MPDGSWFCNDCR 869
Score = 39 (18.8 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 194 EVEAIAEGSALTSPKKNLELKMSKKIS 220
+ E + + SA +P K ++K+ K IS
Sbjct: 292 QFEKLCQESAKQAPTKAEKIKLLKPIS 318
>UNIPROTKB|F1RZJ3 [details] [associations]
symbol:WHSC1L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 OMA:MEKDIHK EMBL:CU570721 Ensembl:ENSSSCT00000017228
Uniprot:F1RZJ3
Length = 1437
Score = 112 (44.5 bits), Expect = 0.00094, Sum P(3) = 0.00094
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 610 CADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQ 647
C GG LL C+ CP +FH EC S+ +P+G W C C+
Sbjct: 917 CEKGGRLLCCESCPASFHPECLSIE-MPEGCWNCNDCK 953
Score = 62 (26.9 bits), Expect = 0.00094, Sum P(3) = 0.00094
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 713 ILLCDQ--CEREFHVGCLKKHKMADLRELPKGKWFC----CMDCS 751
+++CD+ C + +H+ CL +L + P GKW C C +CS
Sbjct: 1333 LVMCDRKDCPKAYHLLCL------NLPQPPYGKWECPWHQCDECS 1371
Score = 52 (23.4 bits), Expect = 0.00094, Sum P(3) = 0.00094
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 444 TRNSSRPGLIANSTPVTSVHKSSQSQRQRKITKKSKKTVLISK 486
T+N S P A S P SV K Q + R ++ K T ++ K
Sbjct: 555 TQNMSSPE--ATSGPTGSVEKKQQRRSIRTRSESEKSTEVVPK 595
>MGI|MGI:109274 [details] [associations]
symbol:Trim28 "tripartite motif-containing 28" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IDA] [GO:0000785
"chromatin" evidence=IDA] [GO:0001837 "epithelial to mesenchymal
transition" evidence=IDA] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO] [GO:0004672 "protein kinase activity"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005654 "nucleoplasm" evidence=IDA]
[GO:0005719 "nuclear euchromatin" evidence=IDA] [GO:0005720
"nuclear heterochromatin" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IDA] [GO:0008270
"zinc ion binding" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0016925 "protein sumoylation" evidence=ISO]
[GO:0031625 "ubiquitin protein ligase binding" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0045739 "positive regulation of DNA repair" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0046777 "protein
autophosphorylation" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051259 "protein oligomerization" evidence=ISO]
[GO:0060028 "convergent extension involved in axis elongation"
evidence=IMP] [GO:0060669 "embryonic placenta morphogenesis"
evidence=IMP] [GO:0070087 "chromo shadow domain binding"
evidence=ISO] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
UniPathway:UPA00886 MGI:MGI:109274 Prosite:PS00518 GO:GO:0051259
GO:GO:0003714 GO:GO:0045893 GO:GO:0005654 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 GO:GO:0005720
GO:GO:0046777 GO:GO:0006351 GO:GO:0000122 GO:GO:0004672
GO:GO:0003713 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 GO:GO:0001837
GO:GO:0045739 Gene3D:1.20.920.10 PROSITE:PS00633 GO:GO:0016925
GO:GO:0060028 GO:GO:0060669 GeneTree:ENSGT00530000062982 CTD:10155
eggNOG:NOG284491 HOGENOM:HOG000137674 HOVERGEN:HBG055353 KO:K08882
OMA:PGMAIVK OrthoDB:EOG4320XK EMBL:X99644 EMBL:U67303 EMBL:AF230878
EMBL:AF230391 EMBL:AF230392 EMBL:BC058391 EMBL:AK089084
IPI:IPI00312128 IPI:IPI00453895 RefSeq:NP_035718.2 UniGene:Mm.15701
UniGene:Mm.398345 ProteinModelPortal:Q62318 SMR:Q62318
DIP:DIP-31477N IntAct:Q62318 STRING:Q62318 PhosphoSite:Q62318
REPRODUCTION-2DPAGE:IPI00312128 REPRODUCTION-2DPAGE:Q62318
PaxDb:Q62318 PRIDE:Q62318 Ensembl:ENSMUST00000005705 GeneID:21849
KEGG:mmu:21849 InParanoid:Q62318 ChiTaRS:TRIM28 NextBio:301330
PMAP-CutDB:Q62318 Bgee:Q62318 CleanEx:MM_TRIM28
Genevestigator:Q62318 GermOnline:ENSMUSG00000005566 Uniprot:Q62318
Length = 834
Score = 101 (40.6 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 26/94 (27%), Positives = 44/94 (46%)
Query: 599 PG--KDNDDLCTICADGGNLLPCDGCPRAFHKEC--ASLSSIPQGDWYCKYCQ---NMFE 651
PG D+ +C +C G+L+ C+ C FH +C +L +P +W C C ++ E
Sbjct: 618 PGILDDSATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLPDLKE 677
Query: 652 RKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIV 685
L D A G V+ + Q ++C R++
Sbjct: 678 EDGSLSLDG-ADSTGVVAKLSPANQ--RKCERVL 708
Score = 73 (30.8 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 20/74 (27%), Positives = 33/74 (44%)
Query: 326 SALSSLPEEKSFACVRCKGTFPITCVGKTGPGPLCNSCVKSKKPQGTMTYTTGIRIRASG 385
S SS ++ + C C+ P T PLC +CV++ + + YT +R++G
Sbjct: 141 SKASSDSQDANQCCTSCEDNAPATSYCVECSEPLCETCVEAHQ---RVKYTKDHTVRSTG 197
Query: 386 PKLVSRSSENDSMC 399
P +R E C
Sbjct: 198 PAK-TRDGERTVYC 210
>UNIPROTKB|H0YEI1 [details] [associations]
symbol:DPF2 "Zinc finger protein ubi-d4" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
HGNC:HGNC:9964 ChiTaRS:DPF2 EMBL:AP000944 Ensembl:ENST00000531989
Bgee:H0YEI1 Uniprot:H0YEI1
Length = 116
Score = 97 (39.2 bits), Expect = 0.00097, P = 0.00097
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 608 TICADGGNLLPCDGCPRAFHKECA--SLSSIPQGDWYCKYCQNMFERKRFLQHDANA 662
T+ A LL CD C R +H C S+S P+G W C C ++ + K + + N+
Sbjct: 60 TVAAQD-QLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLCLDLLKEKASIYQNQNS 115
>ZFIN|ZDB-GENE-030131-2199 [details] [associations]
symbol:prkcbp1l "protein kinase C binding protein
1, like" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR002893 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01753 PRINTS:PR00503
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 ZFIN:ZDB-GENE-030131-2199
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 EMBL:BX324190 IPI:IPI00611878
Ensembl:ENSDART00000124510 ArrayExpress:F1QYK7 Bgee:F1QYK7
Uniprot:F1QYK7
Length = 1131
Score = 132 (51.5 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 603 NDDLCTICADGGNLLPCDGCPRAFHKECASLSSIPQGDWYCKYCQNM 649
ND C +C G +L C+ CPR +H +C L++ P+GDW+C C+ +
Sbjct: 107 NDFYCWVCHREGQVLCCELCPRVYHAKCLKLAAEPEGDWFCPECEKI 153
Score = 44 (20.5 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 570 RRKPYAHIYTSNGVSLHQLAISLSKGRQYPG--KDNDDLCTI 609
+RK + ++SNG S + S +K ++ PG N D C +
Sbjct: 39 KRKAPSPPHSSNGHSPSDTSPSPTKKKKKPGLVNSNKDQCEL 80
>ZFIN|ZDB-GENE-041014-190 [details] [associations]
symbol:dpf3 "D4, zinc and double PHD fingers,
family 3" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0042393 "histone binding" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;IMP] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0048644 "muscle organ morphogenesis" evidence=IMP] [GO:0016568
"chromatin modification" evidence=IEA;ISS] [GO:0055008 "cardiac
muscle tissue morphogenesis" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028
PROSITE:PS50016 PROSITE:PS50157 SMART:SM00184 SMART:SM00249
ZFIN:ZDB-GENE-041014-190 GO:GO:0007399 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0016514
GO:GO:0055008 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0042393
HOVERGEN:HBG004475 InterPro:IPR025750 Pfam:PF14051 eggNOG:NOG271547
HOGENOM:HOG000217918 GeneTree:ENSGT00530000063194 CTD:8110
EMBL:EU245032 EMBL:BX255881 IPI:IPI00488271 RefSeq:NP_001104639.1
UniGene:Dr.81131 ProteinModelPortal:A9LMC0 STRING:A9LMC0
Ensembl:ENSDART00000123387 GeneID:562738 KEGG:dre:562738
InParanoid:Q5RIJ2 OMA:AEVEPRS OrthoDB:EOG49KFR1 NextBio:20884558
Bgee:A9LMC0 Uniprot:A9LMC0
Length = 391
Score = 119 (46.9 bits), Expect = 0.0010, P = 0.0010
Identities = 36/131 (27%), Positives = 59/131 (45%)
Query: 627 HK-ECASLSSIPQGDWYCKYC--QNMFERKRFLQHD-ANAVEAGRVSGVDSVEQITKRCI 682
HK + A SI D YC +C + RK + + + GR SG S Q T +
Sbjct: 260 HKPQKAPDGSIIPND-YCDFCLGDSGSNRKTGQAEELVSCSDCGR-SGHPSCLQFTDNMM 317
Query: 683 RIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKG 742
+ V+ + + C+ C+ C + +L CD C+R +H+ CLK + + P+G
Sbjct: 318 QAVRTYQWQ---CIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLKP----PMTQPPEG 370
Query: 743 KWFCCMDCSRI 753
W C + C +
Sbjct: 371 SWSCHL-CQNL 380
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 999 963 0.00095 122 3 11 22 0.40 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 173
No. of states in DFA: 628 (67 KB)
Total size of DFA: 484 KB (2224 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 85.32u 0.08s 85.40t Elapsed: 00:00:04
Total cpu time: 85.34u 0.09s 85.43t Elapsed: 00:00:04
Start: Thu May 9 16:18:56 2013 End: Thu May 9 16:19:00 2013
WARNINGS ISSUED: 1