Query 001895
Match_columns 999
No_of_seqs 738 out of 4669
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 03:35:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001895.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001895hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3e7a_A PP-1A, serine/threonine 100.0 1.2E-71 4E-76 608.9 29.6 291 648-954 8-298 (299)
2 1fjm_A Protein serine/threonin 100.0 3.7E-68 1.3E-72 591.2 29.8 319 648-992 9-328 (330)
3 3h63_A Serine/threonine-protei 100.0 6.9E-68 2.4E-72 583.2 29.5 291 644-958 12-308 (315)
4 3icf_A PPT, serine/threonine-p 100.0 4.6E-68 1.6E-72 588.6 27.8 291 644-958 13-322 (335)
5 3ll8_A Serine/threonine-protei 100.0 1.1E-67 3.9E-72 586.6 29.9 288 648-958 30-328 (357)
6 2ie4_C PP2A-alpha;, serine/thr 100.0 1.2E-64 3.9E-69 560.2 29.9 287 647-957 9-295 (309)
7 1aui_A Calcineurin, serine/thr 100.0 1.8E-64 6E-69 579.8 30.3 288 648-958 43-341 (521)
8 1wao_1 Serine/threonine protei 100.0 5.9E-58 2E-62 542.9 31.1 289 646-958 167-461 (477)
9 1zgk_A Kelch-like ECH-associat 100.0 4.6E-38 1.6E-42 350.4 32.6 278 84-440 7-287 (308)
10 2xn4_A Kelch-like protein 2; s 100.0 4.7E-36 1.6E-40 332.6 34.5 261 113-440 15-276 (302)
11 3ii7_A Kelch-like protein 7; p 100.0 7.2E-36 2.5E-40 331.7 34.9 258 113-440 11-272 (306)
12 2vpj_A Kelch-like protein 12; 100.0 1.6E-35 5.4E-40 328.0 35.7 262 113-440 14-278 (301)
13 2uvk_A YJHT; unknown function, 100.0 2.8E-36 9.5E-41 342.5 29.4 280 86-440 4-342 (357)
14 2xn4_A Kelch-like protein 2; s 100.0 1E-34 3.6E-39 321.7 33.8 254 86-418 46-302 (302)
15 3ii7_A Kelch-like protein 7; p 100.0 1.4E-34 4.6E-39 321.5 32.2 254 84-416 38-295 (306)
16 1zgk_A Kelch-like ECH-associat 100.0 2.6E-34 9E-39 320.0 32.4 256 84-414 53-308 (308)
17 2z72_A Protein-tyrosine-phosph 100.0 1.8E-36 6.3E-41 342.2 13.7 242 687-944 60-322 (342)
18 4asc_A Kelch repeat and BTB do 100.0 6.5E-35 2.2E-39 325.8 25.5 267 87-423 31-305 (315)
19 2vpj_A Kelch-like protein 12; 100.0 9.2E-34 3.2E-38 313.8 32.3 251 86-415 47-300 (301)
20 4asc_A Kelch repeat and BTB do 100.0 2.3E-34 7.8E-39 321.4 27.1 247 151-440 14-277 (315)
21 2woz_A Kelch repeat and BTB do 100.0 6.2E-34 2.1E-38 318.3 30.1 247 151-440 25-287 (318)
22 2woz_A Kelch repeat and BTB do 100.0 4.5E-34 1.5E-38 319.4 27.1 267 87-423 42-315 (318)
23 2zwa_A Leucine carboxyl methyl 100.0 1.5E-33 5.2E-38 348.2 29.6 293 86-439 383-693 (695)
24 2uvk_A YJHT; unknown function, 100.0 1.8E-29 6.3E-34 286.3 23.9 248 86-381 49-351 (357)
25 2dfj_A Diadenosinetetraphospha 100.0 8.5E-31 2.9E-35 287.3 -0.6 200 699-914 2-211 (280)
26 1k3i_A Galactose oxidase precu 99.9 5.3E-27 1.8E-31 288.4 25.3 275 88-425 182-531 (656)
27 2zwa_A Leucine carboxyl methyl 99.9 1.3E-26 4.4E-31 286.3 27.6 230 171-440 385-635 (695)
28 2qjc_A Diadenosine tetraphosph 99.9 2E-23 6.7E-28 227.2 9.8 187 685-887 6-207 (262)
29 1k3i_A Galactose oxidase precu 99.9 8.6E-22 2.9E-26 242.1 21.2 247 152-440 168-497 (656)
30 1g5b_A Serine/threonine protei 99.8 4.6E-20 1.6E-24 195.6 1.1 122 698-830 13-145 (221)
31 3rqz_A Metallophosphoesterase; 99.4 5.5E-13 1.9E-17 143.4 13.8 189 698-951 4-218 (246)
32 1nnw_A Hypothetical protein; s 99.4 5.5E-12 1.9E-16 135.7 16.8 199 698-951 2-222 (252)
33 3qfm_A SAPH, putative uncharac 99.3 4.4E-12 1.5E-16 138.2 7.3 118 699-827 13-139 (270)
34 1su1_A Hypothetical protein YF 98.7 3.5E-08 1.2E-12 103.1 8.7 69 698-776 26-102 (208)
35 1s3l_A Hypothetical protein MJ 98.6 7.4E-07 2.5E-11 91.6 16.3 65 698-777 26-90 (190)
36 1uf3_A Hypothetical protein TT 98.6 8.3E-07 2.8E-11 92.9 16.4 73 698-777 6-78 (228)
37 2kkn_A Uncharacterized protein 98.3 2.9E-07 1E-11 93.6 4.9 62 698-775 23-86 (178)
38 3ck2_A Conserved uncharacteriz 98.3 4.1E-06 1.4E-10 84.7 12.7 58 698-775 7-64 (176)
39 2a22_A Vacuolar protein sortin 98.3 2.4E-05 8.3E-10 81.8 18.1 120 697-907 25-153 (215)
40 3ib7_A ICC protein; metallopho 97.9 5.8E-05 2E-09 83.6 14.0 71 698-774 26-112 (330)
41 1xm7_A Hypothetical protein AQ 97.9 1.1E-05 3.9E-10 82.8 7.5 69 698-776 2-85 (195)
42 1z2w_A Vacuolar protein sortin 97.9 1.3E-05 4.5E-10 82.2 7.5 64 698-776 11-77 (192)
43 2yvt_A Hypothetical protein AQ 97.9 6.6E-06 2.2E-10 88.1 4.5 73 698-777 6-104 (260)
44 3rl5_A Metallophosphoesterase 97.3 0.0051 1.8E-07 67.0 16.7 63 698-776 60-124 (296)
45 3d03_A Phosphohydrolase; glyce 97.2 0.0005 1.7E-08 73.7 8.0 67 699-775 2-84 (274)
46 3mbr_X Glutamine cyclotransfer 97.0 0.096 3.3E-06 55.3 23.1 185 113-352 30-224 (243)
47 3q7m_A Lipoprotein YFGL, BAMB; 97.0 0.6 2E-05 51.7 31.7 186 151-377 64-265 (376)
48 2nxf_A Putative dimetal phosph 97.0 0.00038 1.3E-08 76.2 4.0 71 699-775 7-100 (322)
49 2q8u_A Exonuclease, putative; 97.0 0.00064 2.2E-08 75.9 5.8 71 698-776 19-110 (336)
50 3dsm_A Uncharacterized protein 96.9 0.19 6.6E-06 55.0 25.4 183 150-375 64-256 (328)
51 3dsm_A Uncharacterized protein 96.8 0.32 1.1E-05 53.3 26.5 228 149-439 16-252 (328)
52 3av0_A DNA double-strand break 96.8 0.0013 4.5E-08 74.9 6.8 72 698-776 21-109 (386)
53 3q7m_A Lipoprotein YFGL, BAMB; 96.8 0.54 1.8E-05 52.1 28.1 178 149-374 152-339 (376)
54 1ii7_A MRE11 nuclease; RAD50, 96.7 0.0014 4.8E-08 73.0 6.4 70 699-775 2-88 (333)
55 2xmo_A LMO2642 protein; phosph 96.3 0.0031 1E-07 73.0 5.9 61 883-944 261-322 (443)
56 3mbr_X Glutamine cyclotransfer 96.3 1.4 4.9E-05 46.3 25.5 208 178-440 24-235 (243)
57 3nol_A Glutamine cyclotransfer 96.2 0.23 7.8E-06 53.0 18.9 185 113-352 52-245 (262)
58 2iwa_A Glutamine cyclotransfer 96.2 1.2 4E-05 47.7 24.7 185 150-373 44-238 (266)
59 3bws_A Protein LP49; two-domai 95.9 0.76 2.6E-05 51.4 23.2 188 151-377 145-339 (433)
60 3nok_A Glutaminyl cyclase; bet 95.9 0.3 1E-05 52.1 18.0 182 113-352 64-255 (268)
61 1kb0_A Quinohemoprotein alcoho 95.8 0.53 1.8E-05 57.4 22.4 114 151-272 88-208 (677)
62 3tho_B Exonuclease, putative; 95.8 0.004 1.4E-07 70.7 3.2 68 699-774 2-90 (379)
63 4fbk_A DNA repair and telomere 95.6 0.0099 3.4E-07 68.6 5.6 52 699-756 78-141 (472)
64 3t1i_A Double-strand break rep 95.5 0.011 3.7E-07 67.8 5.8 73 698-776 33-153 (431)
65 4fbw_A DNA repair protein RAD3 95.4 0.014 4.9E-07 66.5 6.1 53 698-756 14-78 (417)
66 2ad6_A Methanol dehydrogenase 95.2 1.5 5E-05 52.3 23.0 112 151-272 74-194 (571)
67 3nol_A Glutamine cyclotransfer 95.1 2.5 8.5E-05 44.9 21.9 207 178-440 46-256 (262)
68 1l0q_A Surface layer protein; 95.0 1.8 6E-05 47.6 21.9 178 150-378 12-195 (391)
69 2hqs_A Protein TOLB; TOLB, PAL 95.0 2 6.8E-05 48.5 22.5 191 150-380 159-352 (415)
70 2iwa_A Glutamine cyclotransfer 94.9 3.9 0.00013 43.6 22.9 209 178-440 24-237 (266)
71 3vgz_A Uncharacterized protein 94.4 6.3 0.00022 42.1 27.1 187 150-378 111-309 (353)
72 2ojh_A Uncharacterized protein 94.4 1.8 6.1E-05 44.7 18.9 190 148-380 20-214 (297)
73 1ute_A Protein (II purple acid 94.3 0.019 6.6E-07 62.2 3.3 21 885-905 203-223 (313)
74 1gxr_A ESG1, transducin-like e 94.3 3.5 0.00012 43.6 21.4 179 150-376 119-300 (337)
75 1l0q_A Surface layer protein; 94.3 3 0.0001 45.7 21.3 178 150-376 54-237 (391)
76 3no2_A Uncharacterized protein 94.2 2.5 8.4E-05 45.0 19.8 181 150-377 15-202 (276)
77 2qfp_A Purple acid phosphatase 94.0 0.057 2E-06 61.9 6.6 69 699-776 121-198 (424)
78 1yiq_A Quinohemoprotein alcoho 94.0 11 0.00039 45.6 27.4 113 151-271 81-200 (689)
79 1w6s_A Methanol dehydrogenase 93.9 3 0.0001 49.9 21.7 113 151-272 74-200 (599)
80 1kv9_A Type II quinohemoprotei 93.7 11 0.00039 45.4 26.6 113 151-272 77-196 (668)
81 1p22_A F-BOX/WD-repeat protein 93.6 7.1 0.00024 43.8 23.1 176 150-375 153-328 (435)
82 4aez_A CDC20, WD repeat-contai 93.6 8.4 0.00029 42.6 23.5 190 148-381 154-345 (401)
83 3u4y_A Uncharacterized protein 93.2 6.5 0.00022 41.8 21.0 187 148-375 18-210 (331)
84 3bws_A Protein LP49; two-domai 93.2 4.5 0.00015 45.0 20.5 194 151-378 102-298 (433)
85 2ovr_B FBW7, F-BOX/WD repeat p 93.1 13 0.00046 41.5 25.1 180 148-377 217-396 (445)
86 1xzw_A Purple acid phosphatase 93.1 0.094 3.2E-06 60.2 6.3 69 699-776 128-205 (426)
87 3nok_A Glutaminyl cyclase; bet 93.0 5.8 0.0002 42.2 19.5 156 178-377 58-215 (268)
88 3vgz_A Uncharacterized protein 92.9 11 0.00039 40.1 27.1 193 149-380 68-270 (353)
89 2hqs_A Protein TOLB; TOLB, PAL 92.6 4 0.00014 46.0 19.1 191 150-381 203-396 (415)
90 3no2_A Uncharacterized protein 92.5 4.3 0.00015 43.1 18.2 151 185-374 5-156 (276)
91 3vl1_A 26S proteasome regulato 92.1 16 0.00056 40.0 23.1 94 150-264 119-213 (420)
92 3jrp_A Fusion protein of prote 91.9 5 0.00017 43.2 18.2 196 151-381 80-297 (379)
93 4aez_A CDC20, WD repeat-contai 91.7 4.9 0.00017 44.6 18.2 183 150-377 113-298 (401)
94 3jrp_A Fusion protein of prote 91.6 16 0.00056 39.0 23.4 95 151-264 34-135 (379)
95 3hfq_A Uncharacterized protein 91.3 13 0.00043 40.0 20.6 96 151-262 19-116 (347)
96 1gxr_A ESG1, transducin-like e 91.2 7.8 0.00027 40.8 18.5 151 184-377 108-260 (337)
97 1flg_A Protein (quinoprotein e 91.1 10 0.00035 45.0 21.0 111 151-271 79-201 (582)
98 3g4e_A Regucalcin; six bladed 90.8 19 0.00064 38.1 23.0 187 150-380 35-237 (297)
99 3ow8_A WD repeat-containing pr 90.7 20 0.00068 38.3 21.8 181 149-376 101-283 (321)
100 3scy_A Hypothetical bacterial 90.7 18 0.00062 39.0 21.3 98 151-263 30-129 (361)
101 1jmx_B Amine dehydrogenase; ox 90.3 6.1 0.00021 42.0 16.8 104 150-264 21-135 (349)
102 2ad6_A Methanol dehydrogenase 90.3 34 0.0012 40.3 25.3 81 185-270 247-342 (571)
103 1got_B GT-beta; complex (GTP-b 90.0 17 0.00059 39.0 20.2 179 151-375 78-260 (340)
104 2ovr_B FBW7, F-BOX/WD repeat p 89.9 28 0.00095 38.8 23.1 173 151-376 140-312 (445)
105 1k8k_C P40, ARP2/3 complex 41 89.6 12 0.00041 40.1 18.5 134 150-302 30-164 (372)
106 1pjx_A Dfpase, DIISOPROPYLFLUO 89.6 22 0.00075 37.1 21.1 104 149-262 45-161 (314)
107 3jro_A Fusion protein of prote 89.5 5.5 0.00019 48.7 17.4 95 151-264 32-133 (753)
108 2ecf_A Dipeptidyl peptidase IV 89.4 5 0.00017 48.5 16.8 106 149-274 63-190 (741)
109 4ery_A WD repeat-containing pr 89.3 24 0.00081 37.0 25.4 180 151-376 46-227 (312)
110 2z3z_A Dipeptidyl aminopeptida 89.1 28 0.00095 41.6 23.1 114 253-379 234-351 (706)
111 4ery_A WD repeat-containing pr 88.7 26 0.00088 36.8 24.2 180 150-375 87-271 (312)
112 1r5m_A SIR4-interacting protei 88.1 21 0.00071 38.8 19.5 183 148-374 169-363 (425)
113 3hfq_A Uncharacterized protein 88.1 15 0.00051 39.4 17.9 201 150-381 63-281 (347)
114 3tgh_A Glideosome-associated p 88.0 0.15 5.2E-06 56.7 1.6 68 699-775 5-86 (342)
115 3zwl_B Eukaryotic translation 87.7 31 0.0011 36.5 21.1 191 151-378 55-255 (369)
116 4gga_A P55CDC, cell division c 87.7 19 0.00066 39.9 19.1 95 148-264 123-219 (420)
117 1sq9_A Antiviral protein SKI8; 87.4 35 0.0012 36.8 20.7 199 151-377 92-327 (397)
118 2z3z_A Dipeptidyl aminopeptida 87.3 26 0.00091 41.8 21.2 160 200-379 234-398 (706)
119 4gqb_B Methylosome protein 50; 87.0 11 0.00037 41.2 16.1 191 184-443 138-336 (344)
120 3qfk_A Uncharacterized protein 86.8 0.37 1.3E-05 56.9 4.0 67 698-774 20-112 (527)
121 1p22_A F-BOX/WD-repeat protein 86.7 17 0.00057 40.6 17.9 147 184-376 142-289 (435)
122 3ow8_A WD repeat-containing pr 86.7 36 0.0012 36.3 21.3 149 185-376 92-241 (321)
123 3zwl_B Eukaryotic translation 86.5 36 0.0012 36.0 21.8 196 150-374 96-306 (369)
124 1ri6_A Putative isomerase YBHE 86.4 35 0.0012 35.8 22.4 99 151-269 61-165 (343)
125 2ojh_A Uncharacterized protein 86.3 16 0.00055 37.2 16.2 198 151-380 63-266 (297)
126 1ri6_A Putative isomerase YBHE 86.3 26 0.00089 36.8 18.4 96 150-262 15-114 (343)
127 3mkq_A Coatomer beta'-subunit; 86.2 62 0.0021 39.0 23.9 179 151-375 36-220 (814)
128 1hp1_A 5'-nucleotidase; metall 86.2 0.3 1E-05 57.4 2.9 71 698-774 9-94 (516)
129 3v9f_A Two-component system se 86.1 31 0.001 42.1 21.2 188 150-381 427-620 (781)
130 1r5m_A SIR4-interacting protei 85.1 35 0.0012 36.9 19.2 181 151-377 131-324 (425)
131 3v7d_B Cell division control p 84.8 41 0.0014 37.5 20.0 173 150-370 290-463 (464)
132 3pe7_A Oligogalacturonate lyas 84.7 19 0.00065 39.0 16.7 201 151-381 61-282 (388)
133 3c5m_A Oligogalacturonate lyas 84.7 47 0.0016 35.7 21.2 114 253-381 167-282 (396)
134 2vdu_B TRNA (guanine-N(7)-)-me 84.0 59 0.002 36.3 21.0 63 185-264 210-272 (450)
135 3mkq_A Coatomer beta'-subunit; 83.4 44 0.0015 40.3 20.8 183 150-377 77-264 (814)
136 2xdw_A Prolyl endopeptidase; a 83.0 53 0.0018 39.5 21.1 200 150-374 151-370 (710)
137 1qhu_A Protein (hemopexin); be 82.7 38 0.0013 38.8 18.3 48 151-210 168-215 (460)
138 3c5m_A Oligogalacturonate lyas 82.6 15 0.0005 39.9 14.6 207 148-380 166-392 (396)
139 3fm0_A Protein CIAO1; WDR39,SG 82.5 20 0.00068 38.7 15.5 162 184-381 27-190 (345)
140 4a2l_A BT_4663, two-component 82.2 57 0.002 39.8 21.2 189 150-380 427-622 (795)
141 1yfq_A Cell cycle arrest prote 81.8 51 0.0017 34.5 18.3 193 150-376 79-286 (342)
142 2ecf_A Dipeptidyl peptidase IV 81.2 38 0.0013 40.6 18.8 110 255-379 264-375 (741)
143 4g56_B MGC81050 protein; prote 81.1 8.3 0.00028 42.2 11.8 151 184-377 150-306 (357)
144 1w6s_A Methanol dehydrogenase 80.6 1E+02 0.0034 36.6 27.0 83 184-271 252-350 (599)
145 2ynn_A Coatomer subunit beta'; 80.3 60 0.0021 34.0 18.1 93 151-264 36-129 (304)
146 4h2g_A 5'-nucleotidase; dimer, 80.2 1.1 3.7E-05 53.2 4.3 68 697-774 25-117 (546)
147 3vl1_A 26S proteasome regulato 79.9 73 0.0025 34.6 20.9 96 184-302 108-203 (420)
148 3jro_A Fusion protein of prote 79.2 18 0.00061 44.1 15.1 197 150-381 77-295 (753)
149 3dwl_C Actin-related protein 2 79.1 19 0.00063 38.9 13.8 133 151-302 34-168 (377)
150 1k8k_C P40, ARP2/3 complex 41 79.0 70 0.0024 33.9 22.3 97 151-262 75-172 (372)
151 3iuj_A Prolyl endopeptidase; h 78.9 55 0.0019 39.3 19.2 200 150-379 155-366 (693)
152 2z1a_A 5'-nucleotidase; metal- 78.8 1.5 5.2E-05 51.9 5.0 68 698-775 30-119 (552)
153 2vdu_B TRNA (guanine-N(7)-)-me 78.6 80 0.0027 35.1 19.4 155 185-377 115-276 (450)
154 2pm9_A Protein WEB1, protein t 78.3 50 0.0017 35.8 17.2 162 185-376 126-298 (416)
155 2dg1_A DRP35, lactonase; beta 78.1 72 0.0025 33.5 22.4 110 150-271 66-177 (333)
156 3i2n_A WD repeat-containing pr 78.0 13 0.00043 39.6 11.8 181 150-373 44-244 (357)
157 1sq9_A Antiviral protein SKI8; 77.9 78 0.0027 34.0 18.5 94 150-263 36-157 (397)
158 2xdw_A Prolyl endopeptidase; a 77.8 1.1E+02 0.0039 36.4 21.6 202 148-380 206-424 (710)
159 4d9s_A UVB-resistance protein 77.7 93 0.0032 34.6 23.5 63 229-300 182-252 (406)
160 4a11_B DNA excision repair pro 77.1 30 0.001 37.3 14.8 93 150-264 122-219 (408)
161 2aq5_A Coronin-1A; WD40 repeat 76.9 29 0.00099 38.0 14.7 159 186-380 145-309 (402)
162 3azo_A Aminopeptidase; POP fam 76.6 60 0.0021 38.2 18.4 203 149-381 160-378 (662)
163 4aow_A Guanine nucleotide-bind 76.6 76 0.0026 33.0 19.4 178 151-376 109-290 (340)
164 2bkl_A Prolyl endopeptidase; m 76.5 44 0.0015 40.1 17.3 243 149-438 93-349 (695)
165 1rwi_B Serine/threonine-protei 76.1 69 0.0024 32.3 22.1 177 150-374 46-224 (270)
166 3odt_A Protein DOA1; ubiquitin 76.1 74 0.0025 32.6 19.3 177 150-375 39-217 (313)
167 1vyh_C Platelet-activating fac 75.8 99 0.0034 34.0 20.8 123 151-302 131-256 (410)
168 1kb0_A Quinohemoprotein alcoho 75.8 1.4E+02 0.0048 35.7 28.6 83 184-271 254-354 (677)
169 2hes_X YDR267CP; beta-propelle 75.1 36 0.0012 36.3 14.5 163 184-379 118-287 (330)
170 3ive_A Nucleotidase; structura 75.1 1.5 5.2E-05 51.4 3.5 66 698-774 7-96 (509)
171 3mmy_A MRNA export factor; mRN 74.8 63 0.0021 34.0 16.4 99 150-273 108-209 (368)
172 3ztv_A NAD nucleotidase, NADN; 74.7 2.4 8.1E-05 50.6 5.1 68 697-774 12-105 (579)
173 3fm0_A Protein CIAO1; WDR39,SG 73.7 53 0.0018 35.2 15.6 131 151-302 39-172 (345)
174 4gqb_B Methylosome protein 50; 73.5 44 0.0015 36.2 14.9 95 149-264 148-247 (344)
175 1jmx_B Amine dehydrogenase; ox 73.4 93 0.0032 32.5 18.3 102 150-265 65-177 (349)
176 3hxj_A Pyrrolo-quinoline quino 73.3 92 0.0031 32.4 17.4 169 150-376 117-289 (330)
177 1got_B GT-beta; complex (GTP-b 73.3 1E+02 0.0034 32.8 23.3 139 201-374 164-303 (340)
178 3ei3_B DNA damage-binding prot 73.0 1E+02 0.0036 32.9 19.1 181 150-374 96-284 (383)
179 1pgu_A Actin interacting prote 72.7 1.3E+02 0.0045 34.4 19.6 114 241-378 175-289 (615)
180 2pbi_B Guanine nucleotide-bind 72.5 1.1E+02 0.0037 32.9 18.8 180 151-375 87-274 (354)
181 3azo_A Aminopeptidase; POP fam 72.1 1.6E+02 0.0053 34.5 20.5 111 253-381 160-283 (662)
182 4d9s_A UVB-resistance protein 72.0 1.3E+02 0.0043 33.5 20.6 65 229-300 130-200 (406)
183 1erj_A Transcriptional repress 71.7 1.2E+02 0.0041 33.0 18.6 93 150-264 145-239 (393)
184 4e54_B DNA damage-binding prot 70.5 14 0.00049 41.3 10.2 97 151-264 143-241 (435)
185 4gga_A P55CDC, cell division c 70.4 1.3E+02 0.0045 32.9 22.0 96 148-264 167-262 (420)
186 3iz6_a 40S ribosomal protein R 70.4 78 0.0027 34.3 16.2 188 150-378 88-286 (380)
187 3e5z_A Putative gluconolactona 69.8 1.1E+02 0.0036 31.7 22.2 187 149-379 49-253 (296)
188 1qks_A Cytochrome CD1 nitrite 69.6 1.8E+02 0.006 34.1 22.1 93 148-264 175-276 (567)
189 1t71_A Phosphatase, conserved 69.4 2.7 9.4E-05 45.1 3.6 68 697-775 4-75 (281)
190 4g56_B MGC81050 protein; prote 69.3 6.5 0.00022 43.0 6.8 160 184-374 53-215 (357)
191 1yr2_A Prolyl oligopeptidase; 69.0 96 0.0033 37.4 17.9 203 150-378 189-401 (741)
192 3pe7_A Oligogalacturonate lyas 68.7 29 0.001 37.4 12.1 112 148-271 166-279 (388)
193 1nir_A Nitrite reductase; hemo 68.5 52 0.0018 38.3 14.8 131 149-299 247-389 (543)
194 3v7d_B Cell division control p 68.2 1.5E+02 0.0051 32.7 27.0 147 185-377 280-426 (464)
195 1kv9_A Type II quinohemoprotei 67.4 2.1E+02 0.0071 34.1 27.7 120 150-272 127-288 (668)
196 2pm9_A Protein WEB1, protein t 66.9 46 0.0016 36.1 13.3 67 185-264 178-250 (416)
197 2aq5_A Coronin-1A; WD40 repeat 66.6 1.5E+02 0.005 32.1 18.5 156 184-374 93-256 (402)
198 2bkl_A Prolyl endopeptidase; m 66.5 1.2E+02 0.004 36.3 17.8 200 150-378 147-357 (695)
199 2gop_A Trilobed protease; beta 65.9 1.4E+02 0.0046 31.4 18.1 191 148-380 41-259 (347)
200 3c9f_A 5'-nucleotidase; 2',3'- 65.6 2.9 0.0001 49.5 3.1 71 698-775 16-107 (557)
201 3ott_A Two-component system se 65.6 2.3E+02 0.0079 34.0 21.4 194 147-378 389-592 (758)
202 3i2n_A WD repeat-containing pr 65.5 1.3E+02 0.0046 31.2 16.8 67 185-264 31-100 (357)
203 3dwl_C Actin-related protein 2 65.2 45 0.0015 35.8 12.6 96 151-262 78-176 (377)
204 2pbi_B Guanine nucleotide-bind 65.2 1.5E+02 0.0051 31.7 21.0 104 240-374 211-317 (354)
205 4a11_B DNA excision repair pro 65.1 1.4E+02 0.0048 31.7 16.8 100 149-264 165-277 (408)
206 1yiq_A Quinohemoprotein alcoho 64.8 2.4E+02 0.008 33.8 29.8 121 150-272 131-293 (689)
207 3sfz_A APAF-1, apoptotic pepti 64.8 2.7E+02 0.0091 35.5 21.8 123 151-302 638-765 (1249)
208 1pex_A Collagenase-3, MMP-13; 64.6 1.2E+02 0.0042 30.5 19.6 157 178-377 27-197 (207)
209 2ynn_A Coatomer subunit beta'; 64.4 1.4E+02 0.0047 31.0 18.2 93 150-264 77-173 (304)
210 3gve_A YFKN protein; alpha-bet 63.8 4.3 0.00015 44.9 3.8 68 697-774 11-111 (341)
211 1q7f_A NHL, brain tumor CG1071 63.7 1.3E+02 0.0045 30.6 31.4 189 150-378 51-244 (286)
212 2wdc_A SOXB, sulfur oxidation 63.7 3.6 0.00012 48.8 3.4 36 733-774 126-166 (562)
213 2gop_A Trilobed protease; beta 63.3 1.5E+02 0.0051 31.0 17.4 137 150-314 85-250 (347)
214 3iz6_a 40S ribosomal protein R 62.5 1.7E+02 0.0059 31.5 23.5 189 148-372 178-375 (380)
215 2xyi_A Probable histone-bindin 62.3 1.4E+02 0.0047 33.0 16.4 66 187-264 196-264 (430)
216 3scy_A Hypothetical bacterial 62.1 1.6E+02 0.0056 31.1 21.0 100 151-264 78-187 (361)
217 2z2n_A Virginiamycin B lyase; 61.5 1.4E+02 0.0049 30.2 25.0 179 151-378 79-260 (299)
218 1qks_A Cytochrome CD1 nitrite 61.5 1E+02 0.0035 36.2 15.5 249 150-442 266-540 (567)
219 1nir_A Nitrite reductase; hemo 61.2 2.4E+02 0.0081 32.6 19.9 194 150-381 200-416 (543)
220 3jyf_A 2',3'-cyclic nucleotide 61.1 5.6 0.00019 43.9 4.1 68 697-774 8-104 (339)
221 2z2n_A Virginiamycin B lyase; 60.2 1.5E+02 0.0051 30.0 27.0 181 150-378 36-218 (299)
222 1yr2_A Prolyl oligopeptidase; 59.8 2.3E+02 0.0077 34.0 18.8 151 200-380 293-449 (741)
223 3sfz_A APAF-1, apoptotic pepti 59.0 2.3E+02 0.0079 36.1 19.6 94 149-264 678-775 (1249)
224 2ymu_A WD-40 repeat protein; u 58.7 2.4E+02 0.0082 31.9 19.1 122 150-302 366-489 (577)
225 1vyh_C Platelet-activating fac 57.5 2.2E+02 0.0075 31.1 18.5 64 184-264 203-266 (410)
226 2pm7_B Protein transport prote 56.7 1.8E+02 0.0063 29.9 17.8 119 240-381 171-295 (297)
227 3u4y_A Uncharacterized protein 56.2 1.9E+02 0.0064 29.9 18.2 191 151-381 109-313 (331)
228 3dr2_A Exported gluconolactona 54.2 2.1E+02 0.007 29.8 17.9 193 150-379 67-274 (305)
229 3dm0_A Maltose-binding peripla 53.5 3.1E+02 0.011 32.3 18.4 97 186-302 396-494 (694)
230 3o4h_A Acylamino-acid-releasin 53.0 91 0.0031 36.0 13.2 179 152-378 134-320 (582)
231 3v9f_A Two-component system se 53.0 81 0.0028 38.3 13.2 129 150-300 515-646 (781)
232 2pm7_B Protein transport prote 52.7 2.1E+02 0.0072 29.4 17.5 64 185-264 67-133 (297)
233 3dm0_A Maltose-binding peripla 51.9 3.5E+02 0.012 31.8 21.6 184 148-377 450-637 (694)
234 4h5i_A Guanine nucleotide-exch 51.9 2.5E+02 0.0086 30.1 17.2 146 201-375 157-303 (365)
235 1itv_A MMP9; adaptive molecula 51.9 1.9E+02 0.0065 28.7 17.9 156 178-374 10-176 (195)
236 2dg1_A DRP35, lactonase; beta 51.6 2.3E+02 0.0077 29.5 15.9 129 231-378 48-177 (333)
237 2xbg_A YCF48-like protein; pho 51.5 2.5E+02 0.0084 29.9 17.4 133 214-380 26-159 (327)
238 3b7f_A Glycosyl hydrolase, BNR 50.5 2.8E+02 0.0095 30.2 19.2 195 151-380 32-270 (394)
239 2qc5_A Streptogramin B lactona 50.2 2.1E+02 0.0073 28.8 25.4 180 150-378 83-265 (300)
240 3hxj_A Pyrrolo-quinoline quino 50.0 2.3E+02 0.008 29.2 16.0 165 152-374 80-246 (330)
241 1itv_A MMP9; adaptive molecula 49.8 84 0.0029 31.4 10.4 103 184-317 64-174 (195)
242 3oyo_A Hemopexin fold protein 48.4 64 0.0022 33.1 9.5 109 183-316 69-197 (225)
243 2mad_H Methylamine dehydrogena 48.1 3E+02 0.01 29.9 28.7 103 151-264 48-157 (373)
244 3bg1_A Protein SEC13 homolog; 47.2 2.6E+02 0.0091 29.0 15.7 69 185-270 71-142 (316)
245 4ggc_A P55CDC, cell division c 47.2 2.4E+02 0.0083 28.6 20.0 94 150-264 89-182 (318)
246 3bg1_A Protein SEC13 homolog; 47.0 56 0.0019 34.5 9.2 59 150-217 81-142 (316)
247 1pex_A Collagenase-3, MMP-13; 46.8 1.1E+02 0.0037 31.0 10.7 106 184-318 79-193 (207)
248 1pjx_A Dfpase, DIISOPROPYLFLUO 46.6 2.5E+02 0.0087 28.6 16.3 149 201-376 46-212 (314)
249 2qc5_A Streptogramin B lactona 45.9 2.5E+02 0.0085 28.3 26.3 180 150-378 41-223 (300)
250 1yfq_A Cell cycle arrest prote 45.9 2.7E+02 0.0092 28.7 14.8 73 185-273 23-97 (342)
251 3k26_A Polycomb protein EED; W 45.4 2.8E+02 0.0095 28.7 17.3 144 201-374 44-194 (366)
252 2z06_A Putative uncharacterize 45.2 22 0.00074 37.4 5.3 66 699-776 2-70 (252)
253 4e54_B DNA damage-binding prot 44.8 1.4E+02 0.0047 33.0 12.5 21 239-264 308-328 (435)
254 1q7f_A NHL, brain tumor CG1071 44.8 2.6E+02 0.009 28.2 23.1 178 150-372 100-280 (286)
255 1xfd_A DIP, dipeptidyl aminope 43.6 4.6E+02 0.016 30.7 19.1 62 148-219 89-150 (723)
256 2mad_H Methylamine dehydrogena 43.1 1.3E+02 0.0045 32.9 11.8 69 184-264 278-351 (373)
257 2xbg_A YCF48-like protein; pho 42.8 3.3E+02 0.011 28.8 22.5 176 159-380 108-287 (327)
258 4a2l_A BT_4663, two-component 42.0 5.3E+02 0.018 31.0 23.7 196 147-380 279-488 (795)
259 1t70_A Phosphatase; crystal, X 41.8 28 0.00096 36.6 5.5 65 699-775 2-69 (255)
260 3k26_A Polycomb protein EED; W 41.5 2.8E+02 0.0097 28.7 13.9 63 185-264 85-148 (366)
261 3e5z_A Putative gluconolactona 41.1 3.1E+02 0.01 28.0 17.0 154 185-375 40-206 (296)
262 1k32_A Tricorn protease; prote 40.8 6.3E+02 0.021 31.5 21.5 180 150-379 226-416 (1045)
263 3iuj_A Prolyl endopeptidase; h 40.3 5.3E+02 0.018 30.5 19.3 152 201-381 259-414 (693)
264 2yeq_A Apased, PHOD, alkaline 40.1 30 0.001 40.4 6.0 24 883-906 358-383 (527)
265 3odt_A Protein DOA1; ubiquitin 39.6 3.1E+02 0.011 27.6 19.6 105 240-378 156-261 (313)
266 2hz6_A Endoplasmic reticulum t 39.6 8.7 0.0003 42.5 1.2 143 94-297 1-145 (369)
267 1k32_A Tricorn protease; prote 38.7 6.7E+02 0.023 31.2 22.9 197 151-380 34-243 (1045)
268 3of7_A Regulator of chromosome 38.6 4.7E+02 0.016 29.4 18.8 65 228-301 265-341 (473)
269 4ggc_A P55CDC, cell division c 38.2 3.3E+02 0.011 27.5 17.2 52 151-211 46-99 (318)
270 4aow_A Guanine nucleotide-bind 37.8 3.5E+02 0.012 27.7 17.5 99 185-302 51-150 (340)
271 3ba0_A Macrophage metalloelast 37.6 4.4E+02 0.015 28.8 18.7 160 178-377 184-355 (365)
272 1rwi_B Serine/threonine-protei 37.3 3.2E+02 0.011 27.1 17.8 149 184-377 34-185 (270)
273 2ece_A 462AA long hypothetical 36.0 5.3E+02 0.018 29.3 17.6 73 236-318 93-174 (462)
274 3ei3_B DNA damage-binding prot 35.3 4.2E+02 0.014 27.9 19.1 146 186-372 87-236 (383)
275 2ece_A 462AA long hypothetical 35.1 5.5E+02 0.019 29.2 15.5 113 148-264 104-238 (462)
276 1pby_B Quinohemoprotein amine 34.6 3.8E+02 0.013 27.2 20.8 104 149-264 10-125 (337)
277 3f3f_A Nucleoporin SEH1; struc 34.6 3.8E+02 0.013 27.1 23.0 67 185-264 71-144 (351)
278 1xfd_A DIP, dipeptidyl aminope 34.5 3.7E+02 0.012 31.6 14.7 109 151-272 38-150 (723)
279 4h1s_A 5'-nucleotidase; hydrol 34.1 37 0.0013 39.6 5.6 66 699-774 5-95 (530)
280 3kci_A Probable E3 ubiquitin-p 34.0 4.1E+02 0.014 28.9 14.1 64 229-301 274-345 (389)
281 1gen_A Gelatinase A; hydrolase 33.0 4E+02 0.014 26.9 18.0 157 177-374 33-204 (218)
282 3f3f_A Nucleoporin SEH1; struc 32.6 4.1E+02 0.014 26.9 17.0 66 185-264 23-91 (351)
283 3hrp_A Uncharacterized protein 32.0 5.4E+02 0.018 28.2 26.6 193 150-380 152-362 (409)
284 1flg_A Protein (quinoprotein e 32.0 1.5E+02 0.0052 34.7 10.5 81 200-297 465-545 (582)
285 2xyi_A Probable histone-bindin 32.0 3.7E+02 0.013 29.4 13.4 26 233-263 134-160 (430)
286 2ghs_A AGR_C_1268P; regucalcin 30.8 4.8E+02 0.017 27.2 22.0 147 185-371 61-209 (326)
287 2p9w_A MAL S 1 allergenic prot 28.5 5.9E+02 0.02 27.5 13.6 147 184-354 147-306 (334)
288 3fvz_A Peptidyl-glycine alpha- 28.5 5.2E+02 0.018 26.9 26.5 203 150-378 69-283 (329)
289 3lrv_A PRE-mRNA-splicing facto 28.5 5.2E+02 0.018 26.9 20.6 64 185-264 139-202 (343)
290 3c7x_A Matrix metalloproteinas 28.3 4.4E+02 0.015 26.0 12.7 110 184-318 61-176 (196)
291 1su3_A Interstitial collagenas 27.8 7E+02 0.024 28.1 17.9 156 179-377 267-437 (450)
292 2ghs_A AGR_C_1268P; regucalcin 27.7 5.4E+02 0.019 26.8 27.0 101 150-271 71-174 (326)
293 3o4h_A Acylamino-acid-releasin 27.2 7.2E+02 0.025 28.1 15.5 95 202-318 133-228 (582)
294 3kci_A Probable E3 ubiquitin-p 27.2 4.3E+02 0.015 28.8 12.7 19 282-300 116-134 (389)
295 2ymu_A WD-40 repeat protein; u 26.0 7.3E+02 0.025 27.7 20.9 123 150-302 284-407 (577)
296 3sjl_D Methylamine dehydrogena 25.5 1.3E+02 0.0044 33.5 7.8 105 148-264 245-364 (386)
297 3gre_A Serine/threonine-protei 25.5 6.5E+02 0.022 27.0 15.0 144 113-302 181-350 (437)
298 1su3_A Interstitial collagenas 25.3 3.4E+02 0.012 30.7 11.4 106 184-318 318-433 (450)
299 1gen_A Gelatinase A; hydrolase 24.8 5.4E+02 0.018 25.8 14.1 65 184-264 87-154 (218)
300 2hes_X YDR267CP; beta-propelle 24.3 6.1E+02 0.021 26.2 18.1 162 187-381 26-193 (330)
301 1qhu_A Protein (hemopexin); be 22.7 8.6E+02 0.03 27.5 16.3 59 184-264 158-216 (460)
302 3c0t_A Mediator of RNA polymer 22.7 59 0.002 32.8 3.7 39 881-922 103-141 (207)
303 4h5i_A Guanine nucleotide-exch 22.3 7.1E+02 0.024 26.3 19.1 183 150-371 157-342 (365)
304 2p4o_A Hypothetical protein; p 22.2 6.5E+02 0.022 25.8 24.8 185 151-378 54-247 (306)
305 3g4e_A Regucalcin; six bladed 21.6 6.5E+02 0.022 25.6 18.1 153 184-375 24-185 (297)
306 3ott_A Two-component system se 21.2 6.2E+02 0.021 30.1 13.5 98 150-270 493-591 (758)
No 1
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=100.00 E-value=1.2e-71 Score=608.95 Aligned_cols=291 Identities=47% Similarity=0.851 Sum_probs=276.2
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 001895 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (999)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~L~~il~~~g~~~~~~ 727 (999)
++++|++|++.+.|++.. .+.|+++++..||++|+++|++||+++++.+|++||||||||+.+|+++|+..|+++.+
T Consensus 8 ~d~~i~~l~~~~~~~~~~--~~~l~~~~~~~l~~~~~~il~~ep~ll~~~~~i~viGDIHG~~~~L~~ll~~~g~~~~~- 84 (299)
T 3e7a_A 8 LDSIIGRLLEVQGSRPGK--NVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES- 84 (299)
T ss_dssp HHHHHHHHHTTTTSCTTC--CCCCCHHHHHHHHHHHHHHHHHSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCSTTSS-
T ss_pred HHHHHHHHHhccccCCCc--ccCCCHHHHHHHHHHHHHHHHhCCCeeecCCCEEEEecCCCCHHHHHHHHHHhCCCCCc-
Confidence 789999999988776542 45689999999999999999999999999999999999999999999999999998765
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhhhhhhhhhh
Q 001895 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (999)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (999)
+|||||||||||++|+||+.+|++||++||++|++||||||.+.++..|||++||.++|+ ..+|+.+.++|
T Consensus 85 -----~~vfLGD~VDrG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~i~~~ygF~~e~~~ky~----~~l~~~~~~~f 155 (299)
T 3e7a_A 85 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN----IKLWKTFTDCF 155 (299)
T ss_dssp -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHHSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred -----cEEeCCcccCCCCCcHHHHHHHHHHHhhCCCcEEEEecCchhhhhcccccchHHHHHHhh----HHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999995 46999999999
Q ss_pred cccceeEEEcCcEEEecCCccCcccCHHHhhhccCCcccCCCCceeeecccCCCCCCCCCCCCccCCCCCCceeeCHHHH
Q 001895 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (999)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (999)
++||+++++++++|||||||+|.+.++++|+++.||.+++..+ +++|||||||.+ ...+|.+|.||.| +.||++++
T Consensus 156 ~~LPlaaii~~~il~vHGGlsp~~~~l~~i~~i~R~~~~p~~~-~~~dllWsDP~~--~~~~~~~~~RG~~-~~fG~~~~ 231 (299)
T 3e7a_A 156 NCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQG-LLCDLLWSDPDK--DVQGWGENDRGVS-FTFGAEVV 231 (299)
T ss_dssp TTCCCEEEETTTEEEESSCCCTTCCCTHHHHTCCSSCCCCSSS-HHHHHHHCEECT--TCSSEEECTTSSS-EEECHHHH
T ss_pred hhCCceEEECCeEEEEcCccCcccCCHHHHHhccCCCcCCcch-hhhhhhcCCccc--cccCcccCCCCcc-eeeCHHHH
Confidence 9999999999999999999999999999999999999988765 899999999985 3579999999999 68999999
Q ss_pred HHHHHHcCCcEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEcCCceEEeEEeccC
Q 001895 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPL 954 (999)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvFSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~ 954 (999)
++||++||+++||||||++++||+++++++|||||||||||+.++|+||||.+++++.+++++|+|.
T Consensus 232 ~~fl~~n~l~~IiR~Hq~v~~Gy~~~~~~~~iTvfSapnY~~~~~N~~a~l~~~~~~~~~~~~~~~~ 298 (299)
T 3e7a_A 232 AKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 298 (299)
T ss_dssp HHHHHHHTCSEEEECCSCCTTSEEEETTTTEEEEBCCSSGGGTCCCCEEEEEECTTCCEEEEEECCC
T ss_pred HHHHHHCCCeEEEEcCeeeecceEEecCCeEEEEECCcccCCCCCccEEEEEECCCCcEEEEEecCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999874
No 2
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=100.00 E-value=3.7e-68 Score=591.21 Aligned_cols=319 Identities=44% Similarity=0.785 Sum_probs=274.3
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 001895 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (999)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~L~~il~~~g~~~~~~ 727 (999)
++++|++|++.+.+++. ....|+++++..||++|+++|++||+++++.+|++||||||||+++|+++|+..|+++.+
T Consensus 9 ~d~~i~~l~~~~~~~~~--~~~~l~~~~~~~l~~~~~~il~~e~~l~~~~~~i~viGDIHG~~~~L~~ll~~~g~~~~~- 85 (330)
T 1fjm_A 9 LDSIIGRLLEVQGSRPG--KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES- 85 (330)
T ss_dssp HHHHHHHHHHTTTTCTT--CCCCCCHHHHHHHHHHHHHHHHHSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCSTTSS-
T ss_pred HHHHHHHHHhccccCCc--ccCCCCHHHHHHHHHHHHHHHHhCCCeEeecCceEEecCCCCCHHHHHHHHHHhCCCCcc-
Confidence 78899999987665543 234689999999999999999999999999999999999999999999999999998765
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhhhhhhhhhh
Q 001895 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (999)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (999)
+|||||||||||++|+|||.+|++||+.||.+|++||||||.+.++..|||++||.++|+. .+|+.+.++|
T Consensus 86 -----~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~~gf~~e~~~~y~~----~l~~~~~~~f 156 (330)
T 1fjm_A 86 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNI----KLWKTFTDCF 156 (330)
T ss_dssp -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHHSHHHHHHHHSCH----HHHHHHHHHH
T ss_pred -----eEEeCCCcCCCCCChHHHHHHHHHhhhhcCCceEEecCCchHhhhhhhhhhhhhhhhhccH----HHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999853 5899999999
Q ss_pred cccceeEEEcCcEEEecCCccCcccCHHHhhhccCCcccCCCCceeeecccCCCCCCCCCCCCccCCCCCCceeeCHHHH
Q 001895 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (999)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (999)
++||+++++++++||||||++|.+.++++|+.+.||.+++..+ +++|+|||||.. ...+|.+|.||.+ +.||++++
T Consensus 157 ~~LPl~~~i~~~i~~vHgGl~p~~~~l~qi~~i~r~~e~~~~g-~~~dlLWsdp~~--~~~~w~~~~rG~~-~~fG~~~~ 232 (330)
T 1fjm_A 157 NCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQG-LLCDLLWSDPDK--DVQGWGENDRGVS-FTFGAEVV 232 (330)
T ss_dssp TTCCCEEEETTTEEEESSCCCTTCSCHHHHHHCCSSCCCCSSS-HHHHHHHCEECT--TCSSEEECTTSSS-EEECHHHH
T ss_pred HhCCceEEEcCcEEEEccCCCcccCCHHHHhhhhcCccCcccc-hHHHHHhcCCcc--ccCCcCcccCCCc-eeeChHHH
Confidence 9999999999999999999999999999999999999887654 889999999986 3578999999999 78999999
Q ss_pred HHHHHHcCCcEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEcCCceEEeEEeccCCCCCCCCCCCCcc
Q 001895 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPER 967 (999)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvFSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 967 (999)
++||+++++++||||||++++||+++++++|||||||||||+.++|+||||.|++++.+.+++|+|.+...
T Consensus 233 ~~fl~~~~l~liir~Hq~v~~Gy~~~~~~~lvTvfSapnY~~~~~N~ga~l~i~~~~~~~~~~~~~~~~~~--------- 303 (330)
T 1fjm_A 233 AKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKNK--------- 303 (330)
T ss_dssp HHHHHHHTCSEEEECCSCCTTSEEEETTTTEEEEBCCTTCCSSSCCCEEEEEECTTCCEEEEEECCCC------------
T ss_pred HHHHHhCCCceEecccccccCCeEEccCCeEEEEeCCcccccCCCCcEEEEEECCCCcEeEEEecCCcccc---------
Confidence 99999999999999999999999999999999999999999999999999999999999999999876531
Q ss_pred cchhhHHHH-hhcCCCCCCCCCCCCC
Q 001895 968 HIEDTWMQE-LNANRPPTPTRGRPQN 992 (999)
Q Consensus 968 ~~~~~~~~~-~~~~~~~~p~~~~~~~ 992 (999)
....|+.+ ....||+||||++|+.
T Consensus 304 -~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (330)
T 1fjm_A 304 -GKYGQFSGLNPGGRPITPPRNSAKA 328 (330)
T ss_dssp --------------------------
T ss_pred -cccccccccccccCCCCCCCCcccc
Confidence 01123332 2257999999998863
No 3
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=100.00 E-value=6.9e-68 Score=583.23 Aligned_cols=291 Identities=32% Similarity=0.581 Sum_probs=271.2
Q ss_pred CChhHHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCC----eEEEecCCCCHHHHHHHHHH
Q 001895 644 INSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAP----IKIFGDLHGQFGDLMRLFDE 719 (999)
Q Consensus 644 ~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~e~~~l~~~~~----i~vvGDiHG~~~~L~~il~~ 719 (999)
..++++++|+++.+.+ .|+++++.+||.+|+++|++||++++++.| ++||||||||+.+|+++|+.
T Consensus 12 ~~~~~~~~~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~l~~l~~p~~~ri~viGDIHG~~~~L~~ll~~ 81 (315)
T 3h63_A 12 TISFMKELMQWYKDQK----------KLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFEL 81 (315)
T ss_dssp CHHHHHHHHHHHHTTC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCCTTCEEEEECCCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHHhCCCeEEEecCCCceEEEEecCCCCHHHHHHHHHH
Confidence 3467899999997753 578999999999999999999999999887 99999999999999999999
Q ss_pred hCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhh
Q 001895 720 YGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWA 799 (999)
Q Consensus 720 ~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~ 799 (999)
.|+++... +|||||||||||++|+||+.+|++||++||++|++||||||.+.++..|||.+||.++|+ ..+
T Consensus 82 ~g~~~~~~-----~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~ygf~~e~~~k~~----~~l 152 (315)
T 3h63_A 82 NGLPSETN-----PYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYT----AQM 152 (315)
T ss_dssp HCCCBTTB-----CEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHSC----HHH
T ss_pred hCCCCCCC-----EEEEeCCccCCCcChHHHHHHHHHhhhhcCCcEEEEecCcccccccccccccHHHHHHhh----hHH
Confidence 99987652 599999999999999999999999999999999999999999999999999999999995 469
Q ss_pred hhhhhhhhcccceeEEEcCcEEEecCCc-cCcccCHHHhhhccCCcccCCCCceeeecccCCCCCCCCCCCCccCCCCCC
Q 001895 800 WHRINRLFNWLPLAALIEKKIICMHGGI-GRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPG 878 (999)
Q Consensus 800 ~~~~~~~f~~LPlaa~i~~~il~vHgGi-~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~ 878 (999)
|+.+.++|++||+++++++++||||||| ++.+.++++|+++.|+.+++..+ +++|||||||.+ ..+|.+|.||.|
T Consensus 153 ~~~~~~~f~~LPla~ii~~~il~vHGGl~sp~~~~l~~i~~i~R~~~~p~~g-~~~dllWsDP~~---~~g~~~s~RG~g 228 (315)
T 3h63_A 153 YELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG-PMCDLLWSDPQP---QNGRSISKRGVS 228 (315)
T ss_dssp HHHHHHHHTTSCSEEEETTTEEECSSCCCSSTTCCHHHHHHCCCSSCCCSSS-HHHHHHHCEECS---SSSEEECTTSSS
T ss_pred HHHHHHHHhcCCcEEEEcCCEEEeCCCCCCcccCCHHHHHhCcccccccccc-hhhhheecCCCC---CCCcCcCCCCce
Confidence 9999999999999999999999999999 78899999999999999887765 899999999985 468999999999
Q ss_pred ceeeCHHHHHHHHHHcCCcEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEc-CCceEEeEEeccCCCC
Q 001895 879 LVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLG-RDLVVVPKLIHPLPPA 957 (999)
Q Consensus 879 ~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvFSa~~y~~~~~n~ga~l~~~-~~~~~~~~~~~~~~~~ 957 (999)
+.||++++++||++||+++||||||++++||+++++++|||||||||||+.++|+||+|.++ +++...++.|.+.|..
T Consensus 229 -~~fg~~~~~~fl~~n~l~~iiR~Hq~~~~Gy~~~~~~~~iTvfSapnY~~~~~N~~a~~~~~~~~~~~~~~~f~~~~~~ 307 (315)
T 3h63_A 229 -CQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHP 307 (315)
T ss_dssp -EEECHHHHHHHHHHHTCSEEEECCSCCTTSEEEEGGGTEEEECCCTTGGGTSCCCEEEEEEETTEEEEEEEEECCCCCC
T ss_pred -EEECHHHHHHHHHHcCCcEEEEeceeecCCeEEecCCeEEEEECCcccCCCCCccEEEEEEECCCCeEeeEEEecCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999996 6788899999887665
Q ss_pred C
Q 001895 958 I 958 (999)
Q Consensus 958 ~ 958 (999)
.
T Consensus 308 ~ 308 (315)
T 3h63_A 308 N 308 (315)
T ss_dssp S
T ss_pred C
Confidence 4
No 4
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.6e-68 Score=588.57 Aligned_cols=291 Identities=35% Similarity=0.629 Sum_probs=269.9
Q ss_pred CChhHHHHH-HHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCC------eEEEecCCCCHHHHHHH
Q 001895 644 INSVPKKVI-AHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAP------IKIFGDLHGQFGDLMRL 716 (999)
Q Consensus 644 ~~~~~~~~i-~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~e~~~l~~~~~------i~vvGDiHG~~~~L~~i 716 (999)
+.++++++| ++|.+.+ .|+++++..||++|+++|++||+++++..| ++||||||||+.+|+++
T Consensus 13 ~~~~~~~~i~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~~~~l~~p~~~~~ri~viGDIHG~~~~L~~l 82 (335)
T 3icf_A 13 SQEFISKMVNDLFLKGK----------YLPKKYVAAIISHADTLFRQEPSMVELENNSTPDVKISVCGDTHGQFYDVLNL 82 (335)
T ss_dssp CHHHHHHHHHHTGGGTC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCSSSTTCEEEEECCCTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHHhCCCeEEecCCcccCceEEEEecCCCCHHHHHHH
Confidence 556789999 7775532 578999999999999999999999999999 99999999999999999
Q ss_pred HHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccc
Q 001895 717 FDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDG 796 (999)
Q Consensus 717 l~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~ 796 (999)
|+.+|+++... +|||||||||||++|+||+.+|++||++||++|++||||||.+.++..|||..||.++|+
T Consensus 83 l~~~g~~~~~~-----~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~ygf~~e~~~k~~---- 153 (335)
T 3icf_A 83 FRKFGKVGPKH-----TYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHESDNMNKIYGFEDECKYKYS---- 153 (335)
T ss_dssp HHHHCCCBTTE-----EEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHHSHHHHHHHHSC----
T ss_pred HHHcCCCCCCc-----EEEEeCCccCCCcChHHHHHHHHHHhhhCCCcEEEecCchhhhhhhhccccchHhHhhcc----
Confidence 99999986542 699999999999999999999999999999999999999999999999999999999995
Q ss_pred hhhhhhhhhhhcccceeEEEcCcEEEecCCc-cCcccCHHHhhhccCCcccCCCCceeeecccCCCCCCCCCCCCccCCC
Q 001895 797 IWAWHRINRLFNWLPLAALIEKKIICMHGGI-GRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNAR 875 (999)
Q Consensus 797 ~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi-~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~~~~~~~n~r 875 (999)
..+|+.+.++|++||+++++++++||||||| +|.+.++++|+.+.|+.+++..+ +++|||||||.+ ..+|.+|.|
T Consensus 154 ~~l~~~~~~~f~~LPlaaii~~~il~vHGGl~sp~~~~ld~i~~i~R~~~~p~~g-~~~dlLWSDP~~---~~g~~~s~R 229 (335)
T 3icf_A 154 QRIFNMFAQSFESLPLATLINNDYLVMHGGLPSDPSATLSDFKNIDRFAQPPRDG-AFMELLWADPQE---ANGMGPSQR 229 (335)
T ss_dssp HHHHHHHHHHHTTSCSEEEETTTEEECSSCCCSCTTCCHHHHHTCCCSSCCCSSS-HHHHHHHCEECS---SSSEEECCC
T ss_pred HHHHHHHHHHHhhcceeEEEcCcEEEecCCcCCCccCCHHHHHhCcccccccccc-chhhhhccCCCC---cCCcccCCC
Confidence 4699999999999999999999999999999 78999999999999999887765 899999999985 468999999
Q ss_pred CCCceeeCHHHHHHHHHHcCCcEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEcC-----------Cc
Q 001895 876 GPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGR-----------DL 944 (999)
Q Consensus 876 g~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvFSa~~y~~~~~n~ga~l~~~~-----------~~ 944 (999)
|.| +.||++++++||++|++++||||||++++||+++++++|||||||||||+.++|+||||.|++ ++
T Consensus 230 G~g-~~FG~~~~~~fl~~n~l~~IiR~Hq~~~~Gy~~~~~~~liTvfSapnYc~~~~N~~a~~~i~~~~~~~~~~~~~~~ 308 (335)
T 3icf_A 230 GLG-HAFGPDITDRFLRNNKLRKIFRSHELRMGGVQFEQKGKLMTVFSAPNYCDSQGNLGGVIHVVPGHGILQAGRNDDQ 308 (335)
T ss_dssp C---EEECHHHHHHHHHHTTCSEEEECSSCCTEEEEEEGGGTEEEECCCTTGGGTSCCEEEEEEECTTCCCCBTTTBCCT
T ss_pred CCc-eeeCHHHHHHHHHHCCCeEEEEcCceecCeEEEecCCcEEEEECCcccCCCCCCceEEEEEecccccccccccccC
Confidence 999 689999999999999999999999999999999999999999999999999999999999999 88
Q ss_pred eEEeEEeccCCCCC
Q 001895 945 VVVPKLIHPLPPAI 958 (999)
Q Consensus 945 ~~~~~~~~~~~~~~ 958 (999)
.+.++.|.+.|...
T Consensus 309 ~~~~~~f~~~~~~~ 322 (335)
T 3icf_A 309 NLIIETFEAVEHPD 322 (335)
T ss_dssp TEEEEEECCCCCCS
T ss_pred ceeEEEEecCCCCC
Confidence 99999999877654
No 5
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=100.00 E-value=1.1e-67 Score=586.63 Aligned_cols=288 Identities=36% Similarity=0.615 Sum_probs=266.3
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 001895 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (999)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~L~~il~~~g~~~~~~ 727 (999)
++.+++++++.+ .|+++++.+||++|+++|++||+++++.+|++||||||||+.+|+++|+..+.++.+
T Consensus 30 ~~~~~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~ll~~~~pi~ViGDIHG~~~dL~~ll~~~g~~~~~- 98 (357)
T 3ll8_A 30 VDILKAHLMKEG----------RLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT- 98 (357)
T ss_dssp HHHHHHHHHTTC----------CBCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTC-
T ss_pred HHHHHHHHHhCC----------CCCHHHHHHHHHHHHHHHHhCCCeEEecccceeeccCCCCHHHHHHHHHhcCCCCCc-
Confidence 788899998753 578999999999999999999999999999999999999999999999999988765
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhhhhhhhhhh
Q 001895 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (999)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (999)
+|||||||||||++|+||+.+|++||++||++|++||||||.+.++..|||++||.++|+ ..+|+.+.++|
T Consensus 99 -----~~vfLGD~VDRG~~s~Evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~ygF~~E~~~ky~----~~l~~~~~~~f 169 (357)
T 3ll8_A 99 -----RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS----ERVYDACMDAF 169 (357)
T ss_dssp -----CEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHSSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred -----EEEECCCccCCCcChHHHHHHHHHhhhhcCCcEEEEeCchhhhhhhcccCchhhhhhccc----hhHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999995 46999999999
Q ss_pred cccceeEEEcCcEEEecCCccCcccCHHHhhhccCCcccCCCCceeeecccCCCCCCCC----CCCCcc-CCCCCCceee
Q 001895 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDS----VEGLRP-NARGPGLVTF 882 (999)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~----~~~~~~-n~rg~~~~~f 882 (999)
++||+++++++++|||||||+|.+.++++|+++.||.+++..+ +++|||||||.+... ..+|.+ +.||+| +.|
T Consensus 170 ~~LPlaaii~~~il~vHGGlsp~l~~ld~I~~i~R~~e~p~~g-~~~DlLWSDP~~~~~~~~~~~~~~~~s~RG~g-~~F 247 (357)
T 3ll8_A 170 DCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG-PMCDILWSDPLEDFGNEKTQEHFTHNTVRGCS-YFY 247 (357)
T ss_dssp HTSCSEEEETTTEEECSSCCCTTCCSHHHHHTCCCSSCCCSSS-HHHHHHHCEECTTTTSCSCCCSEEECTTTTSS-EEE
T ss_pred HhCCcceEEcccEEEEecCcCcccCCHHHHhhccccccCCccC-chhHhhccCccccccccccccccccCCCCCCc-eEE
Confidence 9999999999999999999999999999999999999988766 799999999986422 245764 589999 689
Q ss_pred CHHHHHHHHHHcCCcEEEEeccccccceEEecCC------eEEEEecccccCCCCCCeEEEEEEcCCceEEeEEeccCCC
Q 001895 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQG------HLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPP 956 (999)
Q Consensus 883 g~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~------~~iTvFSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~ 956 (999)
|++++++||++||+++||||||++++||++++++ +|||||||||||+.++|+||||.+++++ +.+++|.+.|.
T Consensus 248 G~~~~~~Fl~~n~l~~IiRaHq~~~~Gy~~~~~~~~~g~~~liTvFSApnYc~~~~N~~a~l~~~~~~-~~~~~f~~~~h 326 (357)
T 3ll8_A 248 SYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSPH 326 (357)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSCCTTSEEECCBCTTTSSBSEEEECCCTTGGGTSCCCEEEEEEETTE-EEEEEECCCCC
T ss_pred ChHHHHHHHHHCCCeEEEEeccccccceEEecCCcCCCCCcEEEEECCCccCCCCCccEEEEEEECCc-ceEEEecCCCC
Confidence 9999999999999999999999999999999887 6999999999999999999999998876 67888987766
Q ss_pred CC
Q 001895 957 AI 958 (999)
Q Consensus 957 ~~ 958 (999)
.+
T Consensus 327 p~ 328 (357)
T 3ll8_A 327 PY 328 (357)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 6
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=100.00 E-value=1.2e-64 Score=560.21 Aligned_cols=287 Identities=39% Similarity=0.726 Sum_probs=269.6
Q ss_pred hHHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHhCCCCCC
Q 001895 647 VPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTA 726 (999)
Q Consensus 647 ~~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~L~~il~~~g~~~~~ 726 (999)
.++++|++|++.+ .|+++++.+||++|+++|++||+++++..|++||||||||+++|+++|+..+.++.+
T Consensus 9 ~~~~~i~~~~~~~----------~l~~~~~~~l~~~~~~il~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~ 78 (309)
T 2ie4_C 9 ELDQWIEQLNECK----------QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDT 78 (309)
T ss_dssp HHHHHHHHHTTTC----------CCCHHHHHHHHHHHHHHHHHSCTTEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTS
T ss_pred HHHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHHhCCCEEeccCCEEEEecCCCCHHHHHHHHHHcCCCCCC
Confidence 4788999997542 589999999999999999999999999999999999999999999999999987765
Q ss_pred CCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhhhhhhhhh
Q 001895 727 GDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRL 806 (999)
Q Consensus 727 ~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~ 806 (999)
+|||||||||||++|+|||.+|++||++||++|++||||||.+.++..|||.+||.++||.. .+|+.+.++
T Consensus 79 ------~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~~gf~~e~~~~yg~~---~l~~~~~~~ 149 (309)
T 2ie4_C 79 ------NYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNA---NVWKYFTDL 149 (309)
T ss_dssp ------CEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSTTGGGTSSHHHHHHHHSSST---HHHHHHHHH
T ss_pred ------EEEEeCCccCCCCChHHHHHHHHHHHhhCCCcEEEEeCCCCHHHHhhhhhhhHHHHhhcccH---HHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999863 599999999
Q ss_pred hcccceeEEEcCcEEEecCCccCcccCHHHhhhccCCcccCCCCceeeecccCCCCCCCCCCCCccCCCCCCceeeCHHH
Q 001895 807 FNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDR 886 (999)
Q Consensus 807 f~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~ 886 (999)
|++||+++++++++|||||||+|.+.++++|+.++|+.+++..+ .++|+|||||.+ ..+|.++.||.| +.||+++
T Consensus 150 ~~~LPl~~~i~~~il~vHgGl~p~~~~~~~i~~i~r~~~~~~~~-~~~dllWsdp~~---~~~~~~s~RG~g-~~fG~~~ 224 (309)
T 2ie4_C 150 FDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEG-PMCDLLWSDPDD---RGGWGISPRGAG-YTFGQDI 224 (309)
T ss_dssp TTSSCSCEEETTTEEECSSCCCTTCCSHHHHHTSCCSSCCCSSS-HHHHHHHCEECS---SSSEEECTTSSS-EEECHHH
T ss_pred HHhCCceEEEcCcEEEECCCCCCcccCHHHHHhhcccccCChhH-HHHHHhhCCCcc---ccccccCCCCcc-cccCHHH
Confidence 99999999999999999999999999999999999999887655 789999999985 478999999999 6899999
Q ss_pred HHHHHHHcCCcEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEEcCCceEEeEEeccCCCC
Q 001895 887 VMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPA 957 (999)
Q Consensus 887 ~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvFSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~~ 957 (999)
+++||++||+++||||||++++||+++++++|||||||||||+.++|+||+|.+++++.+.+++|.|.+..
T Consensus 225 ~~~fl~~n~l~~iir~Hq~~~~G~~~~~~~~~iTvfSa~ny~~~~~N~~a~l~i~~~~~~~~~~~~~~~~~ 295 (309)
T 2ie4_C 225 SETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRR 295 (309)
T ss_dssp HHHHHHHTTCSEEEECCSCCTEEEEEETTTTEEEECCCSSGGGTSCCEEEEEEECTTCCEEEEEECCCC--
T ss_pred HHHHHHHcCCeEEEecCcceeCCEEEecCCeEEEEECCcccccCCCCeEEEEEECCCCcEeEEEEeCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999987653
No 7
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=100.00 E-value=1.8e-64 Score=579.83 Aligned_cols=288 Identities=37% Similarity=0.620 Sum_probs=266.5
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 001895 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (999)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~e~~~l~~~~~i~vvGDiHG~~~~L~~il~~~g~~~~~~ 727 (999)
++.+|++|++.+ .|+++++.+||++|+++|++||+++++..|++|||||||||++|+++|+..+.++.+
T Consensus 43 ~d~l~~~~~~~~----------~l~~~~i~~L~~~a~~il~~Ep~ll~l~~pI~VIGDIHGq~~dL~~LL~~~g~p~~d- 111 (521)
T 1aui_A 43 VDILKAHLMKEG----------RLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT- 111 (521)
T ss_dssp HHHHHHHHHTTC----------CBCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTC-
T ss_pred HHHHHHHHHhCC----------CCCHHHHHHHHHHHHHHHHhCCCeEeeccceeeccCCCCCHHHHHHHHHhcCCCCcc-
Confidence 678899987643 578999999999999999999999999999999999999999999999998887755
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhhhhhhhhhh
Q 001895 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (999)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (999)
+|||||||||||++|+|||.+|++||++||++|++||||||.+.++..|||+.||..+|+ ..+|+.+.++|
T Consensus 112 -----~yVFLGDyVDRGp~S~Evl~lL~aLk~~~P~~v~lLRGNHE~~~l~~~ygF~~E~~~ky~----~~l~~~~~~~f 182 (521)
T 1aui_A 112 -----RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS----ERVYDACMDAF 182 (521)
T ss_dssp -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHSSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred -----eEEEcCCcCCCCCCHHHHHHHHHHHhhhCCCeEEEecCCccHHHHHHHhCccHHHHHhhh----hHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999996 36999999999
Q ss_pred cccceeEEEcCcEEEecCCccCcccCHHHhhhccCCcccCCCCceeeecccCCCCCCCC----CCCCccC-CCCCCceee
Q 001895 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDS----VEGLRPN-ARGPGLVTF 882 (999)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~----~~~~~~n-~rg~~~~~f 882 (999)
++||+++++++++|||||||+|.+.++++|+++.|+.+++..+ +++|||||||.+... ..+|.+| .||+| +.|
T Consensus 183 ~~LPlaaii~~~il~VHGGlsP~~~sld~I~~I~R~~e~p~~g-~~~DLLWSDP~~~~g~~~~~~~f~~ns~RG~g-~~F 260 (521)
T 1aui_A 183 DCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG-PMCDILWSDPLEDFGNEKTQEHFTHNTVRGCS-YFY 260 (521)
T ss_dssp TTSCCEEEETTTEEEESSCCCTTCCSHHHHHHSCCSSSCCSSS-HHHHHHHCEECTTTTSCSSCCCEEECTTTTSS-EEE
T ss_pred HhCCceEEecCCceEECCCcCcccCCHHHhhhccCCcCCCccc-hhhhheecCccccccccccCcceecccCCCcc-ccc
Confidence 9999999999999999999999999999999999999887765 899999999986421 2568887 79999 689
Q ss_pred CHHHHHHHHHHcCCcEEEEeccccccceEEecCC------eEEEEecccccCCCCCCeEEEEEEcCCceEEeEEeccCCC
Q 001895 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQG------HLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPP 956 (999)
Q Consensus 883 g~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~------~~iTvFSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~ 956 (999)
|++++++||++||+++||||||++++||++++++ +|||||||||||+.++|+||||.|+++ .+.+++|.+.+.
T Consensus 261 G~d~v~~FL~~n~l~lIIRaHq~v~~Gy~~~~~~~~~g~~kliTVFSApNYc~~~~N~gAvl~i~~~-~~~~~~f~~~~~ 339 (521)
T 1aui_A 261 SYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENN-VMNIRQFNCSPH 339 (521)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSCCTTSEEECCBCTTTSSBSEEEECCCSSGGGTSCCCEEEEEEETT-EEEEEEECCCCC
T ss_pred CHHHHHHHHHHcCCcEEEEccchhccceeeecCCcCCCCCeEEEEeCCcccCCCCCceEEEEEEeCC-cceEEEecCCCC
Confidence 9999999999999999999999999999999987 599999999999999999999999988 578899988765
Q ss_pred CC
Q 001895 957 AI 958 (999)
Q Consensus 957 ~~ 958 (999)
.+
T Consensus 340 p~ 341 (521)
T 1aui_A 340 PY 341 (521)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 8
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=100.00 E-value=5.9e-58 Score=542.94 Aligned_cols=289 Identities=33% Similarity=0.599 Sum_probs=267.6
Q ss_pred hhHHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCC----eEEEecCCCCHHHHHHHHHHhC
Q 001895 646 SVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAP----IKIFGDLHGQFGDLMRLFDEYG 721 (999)
Q Consensus 646 ~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~e~~~l~~~~~----i~vvGDiHG~~~~L~~il~~~g 721 (999)
..++++++.+.+.+ .++++++..||.++.++|.+||++++++.| ++||||||||+.+|+++|+..|
T Consensus 167 ~~l~~lie~l~~~~----------~l~e~~v~~L~~~a~eil~~e~~~~~~~~~~~~~~~vigDiHG~~~~l~~~l~~~~ 236 (477)
T 1wao_1 167 SFMKELMQWYKDQK----------KLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNG 236 (477)
T ss_dssp HHHHHHHHHHHTCC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCCSSCEEEEECBCTTCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHccCCCeEEeecCCCcceEEEeCCCCCHHHHHHHHHHcC
Confidence 45778888886542 478999999999999999999999999877 9999999999999999999999
Q ss_pred CCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchhhhcCChHHHHHHhCCccchhhhh
Q 001895 722 SPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWH 801 (999)
Q Consensus 722 ~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~ 801 (999)
+++... .|||||||||||++|+||+.+|++||++||.+|++||||||.+.++..|||..||.++|+. .+|+
T Consensus 237 ~~~~~~-----~~v~lGD~vdrG~~s~e~~~~l~~l~~~~~~~~~~lrGNHE~~~~~~~~g~~~~~~~~~~~----~~~~ 307 (477)
T 1wao_1 237 LPSETN-----PYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTA----QMYE 307 (477)
T ss_dssp CCBTTB-----CEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHSCT----THHH
T ss_pred CCCCcC-----eEEEeccccCCCcchHHHHHHHHHHHhhCCCceEeecCCccHHHHhhhcChHHHHHHHhhH----HHHH
Confidence 886542 5999999999999999999999999999999999999999999999999999999999975 5999
Q ss_pred hhhhhhcccceeEEEcCcEEEecCCc-cCcccCHHHhhhccCCcccCCCCceeeecccCCCCCCCCCCCCccCCCCCCce
Q 001895 802 RINRLFNWLPLAALIEKKIICMHGGI-GRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLV 880 (999)
Q Consensus 802 ~~~~~f~~LPlaa~i~~~il~vHgGi-~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~~~ 880 (999)
.+.++|++||+++++++++||||||| ++...++++|+++.|+.+++..+ +++|+|||||.. ..+|.++.||.| +
T Consensus 308 ~~~~~~~~lp~~~~~~~~~~~vHgg~~~~~~~~l~~i~~~~r~~~~~~~~-~~~dllWsdp~~---~~~~~~~~rg~~-~ 382 (477)
T 1wao_1 308 LFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG-PMCDLLWSDPQP---QNGRSISKRGVS-C 382 (477)
T ss_dssp HHHHHHTTSCSEEEETTTEEECSSCCCSSSCCCHHHHHTCCCSSCCCSSS-HHHHHHHCEECS---SSSCEECTTSSS-E
T ss_pred HHHHHhccCCcEEEEcCcEEEECCCCCccccCCHHHHHhccCCCCCchhh-hhhhhccCCCCc---cCCcCcCCCCCc-e
Confidence 99999999999999999999999999 77888999999999998887654 899999999985 468999999999 5
Q ss_pred eeCHHHHHHHHHHcCCcEEEEeccccccceEEecCCeEEEEecccccCCCCCCeEEEEEE-cCCceEEeEEeccCCCCC
Q 001895 881 TFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVL-GRDLVVVPKLIHPLPPAI 958 (999)
Q Consensus 881 ~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvFSa~~y~~~~~n~ga~l~~-~~~~~~~~~~~~~~~~~~ 958 (999)
.||++++++||++||+++||||||++++||+++++|+|||||||||||+.++|+||||.| ++++.+.++.|.+.+...
T Consensus 383 ~fg~~~~~~fl~~~~~~~iir~H~~~~~g~~~~~~~~~~tvfsa~~y~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (477)
T 1wao_1 383 QFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHPN 461 (477)
T ss_dssp EECHHHHHHHHHHTTCCEEEECCSCCTEEEEEEGGGTEEEEBCCTTTTSSSCCEEEEEEEETTEEEEEEEEECCCCCCS
T ss_pred eECHHHHHHHHHHcCCeEEEECCCCCcCCeEEecCCeEEEEeCCcccccCCCccEEEEEEECCCCeEEEEEEeCCCCCC
Confidence 899999999999999999999999999999999999999999999999999999999999 688999999999876543
No 9
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=4.6e-38 Score=350.40 Aligned_cols=278 Identities=19% Similarity=0.318 Sum_probs=229.6
Q ss_pred ccCCCCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEE
Q 001895 84 KKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWS 163 (999)
Q Consensus 84 ~~~~~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~ 163 (999)
..+..|.+|.+|+++.+ +++||+|||. ... .++++++||+.+++|+
T Consensus 7 ~~~~~~~~~~~~~~~~~------------~~~i~v~GG~-~~~---------------------~~~~~~~~d~~~~~W~ 52 (308)
T 1zgk_A 7 HHHSSGLVPRGSHAPKV------------GRLIYTAGGY-FRQ---------------------SLSYLEAYNPSNGTWL 52 (308)
T ss_dssp --------------CCC------------CCCEEEECCB-SSS---------------------BCCCEEEEETTTTEEE
T ss_pred ccccCCeeeCCccccCC------------CCEEEEEeCc-CCC---------------------CcceEEEEcCCCCeEe
Confidence 44567889999999998 7899999998 211 7789999999999999
Q ss_pred EecCCCCCCCCCcCcEEEEeCCEEEEEcccC---CCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcE
Q 001895 164 RITPFGEPPTPRAAHVATAVGTMVVIQGGIG---PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRY 240 (999)
Q Consensus 164 ~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~---~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~ 240 (999)
.+..+ |.+|.+|++++++++|||+||.. ......+++++||+.++ +|+.++ ++|.+|..|+++++++ +
T Consensus 53 ~~~~~---p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~--~W~~~~---~~p~~r~~~~~~~~~~-~ 123 (308)
T 1zgk_A 53 RLADL---QVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTN--QWSPCA---PMSVPRNRIGVGVIDG-H 123 (308)
T ss_dssp ECCCC---SSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTT--EEEECC---CCSSCCBTCEEEEETT-E
T ss_pred ECCCC---CcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCC--eEeECC---CCCcCccccEEEEECC-E
Confidence 99654 88999999999999999999984 33445689999999986 599997 8999999999999987 8
Q ss_pred EEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCe
Q 001895 241 LMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGR 320 (999)
Q Consensus 241 Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~ 320 (999)
|||+||.++...++++|+||+.++ +|+.+.++ |.+|..|++++ .+++||++||.++.. .+++++.|+..++
T Consensus 124 iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~~~-~~~~iyv~GG~~~~~-~~~~~~~yd~~~~-- 194 (308)
T 1zgk_A 124 IYAVGGSHGCIHHNSVERYEPERD--EWHLVAPM---LTRRIGVGVAV-LNRLLYAVGGFDGTN-RLNSAECYYPERN-- 194 (308)
T ss_dssp EEEECCEETTEECCCEEEEETTTT--EEEECCCC---SSCCBSCEEEE-ETTEEEEECCBCSSC-BCCCEEEEETTTT--
T ss_pred EEEEcCCCCCcccccEEEECCCCC--eEeECCCC---CccccceEEEE-ECCEEEEEeCCCCCC-cCceEEEEeCCCC--
Confidence 999999988888999999999999 99999765 34455555554 599999999998765 4899999999888
Q ss_pred EEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCCCc
Q 001895 321 WEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAA 400 (999)
Q Consensus 321 W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~ 400 (999)
+|...+.+ |.+|..|++++++++|||+||.+.... .+++++||+++++|+.+..+
T Consensus 195 -~W~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~~----~~~v~~yd~~~~~W~~~~~~------------------- 249 (308)
T 1zgk_A 195 -EWRMITAM-NTIRSGAGVCVLHNCIYAAGGYDGQDQ----LNSVERYDVETETWTFVAPM------------------- 249 (308)
T ss_dssp -EEEECCCC-SSCCBSCEEEEETTEEEEECCBCSSSB----CCCEEEEETTTTEEEECCCC-------------------
T ss_pred -eEeeCCCC-CCccccceEEEECCEEEEEeCCCCCCc----cceEEEEeCCCCcEEECCCC-------------------
Confidence 77777655 789999999999999999999875432 78999999999999999876
Q ss_pred cCCCCcceeEEEEECCEEEEEcCCCCCcCcCcEEEeeccc
Q 001895 401 VELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLA 440 (999)
Q Consensus 401 ~~p~~R~~hsa~~~~~~LyV~GG~~~~~~l~Dv~~ld~~~ 440 (999)
|.+|..|++++++++|||+||+++...+++++++|...
T Consensus 250 --p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~ 287 (308)
T 1zgk_A 250 --KHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDT 287 (308)
T ss_dssp --SSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred --CCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCC
Confidence 67999999999999999999998888899999999754
No 10
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=4.7e-36 Score=332.62 Aligned_cols=261 Identities=23% Similarity=0.368 Sum_probs=224.9
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcc
Q 001895 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (999)
Q Consensus 113 ~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG 192 (999)
+++||+|||.... .++++++||+.+++|+.+..+ |.+|.+|++++++++|||+||
T Consensus 15 ~~~i~v~GG~~~~----------------------~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~~~lyv~GG 69 (302)
T 2xn4_A 15 PKLMVVVGGQAPK----------------------AIRSVECYDFKEERWHQVAEL---PSRRCRAGMVYMAGLVFAVGG 69 (302)
T ss_dssp CEEEEEECCBSSS----------------------BCCCEEEEETTTTEEEEECCC---SSCCBSCEEEEETTEEEEESC
T ss_pred CCEEEEECCCCCC----------------------CCCcEEEEcCcCCcEeEcccC---CcccccceEEEECCEEEEEeC
Confidence 5789999997531 677999999999999999765 889999999999999999999
Q ss_pred cCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcc
Q 001895 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (999)
Q Consensus 193 ~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (999)
.... ...+++++||+.++ +|+.++ ++|.+|+.|+++++++ +|||+||.++...++++|+||+.++ +|+.+.
T Consensus 70 ~~~~-~~~~~~~~~d~~~~--~W~~~~---~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~d~~~~--~W~~~~ 140 (302)
T 2xn4_A 70 FNGS-LRVRTVDSYDPVKD--QWTSVA---NMRDRRSTLGAAVLNG-LLYAVGGFDGSTGLSSVEAYNIKSN--EWFHVA 140 (302)
T ss_dssp BCSS-SBCCCEEEEETTTT--EEEEEC---CCSSCCBSCEEEEETT-EEEEEEEECSSCEEEEEEEEETTTT--EEEEEC
T ss_pred cCCC-ccccceEEECCCCC--ceeeCC---CCCccccceEEEEECC-EEEEEcCCCCCccCceEEEEeCCCC--eEeecC
Confidence 8643 45689999999986 599997 8999999999999988 8999999988888999999999999 999997
Q ss_pred cCCCCCCCccceEEEEEeCCEEEEEeccCCCC-CCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcC
Q 001895 273 PEGEGPPPCMYATASARSDGLLLLCGGRDASS-VPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGG 351 (999)
Q Consensus 273 ~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~-~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG 351 (999)
+++ .+|..|.+ +..+++||++||.+... ..+++++.|+..++ +|.....+ |.+|..|++++++++|||+||
T Consensus 141 ~~p---~~r~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~---~W~~~~~~-p~~r~~~~~~~~~~~iyv~GG 212 (302)
T 2xn4_A 141 PMN---TRRSSVGV-GVVGGLLYAVGGYDVASRQCLSTVECYNATTN---EWTYIAEM-STRRSGAGVGVLNNLLYAVGG 212 (302)
T ss_dssp CCS---SCCBSCEE-EEETTEEEEECCEETTTTEECCCEEEEETTTT---EEEEECCC-SSCCBSCEEEEETTEEEEECC
T ss_pred CCC---CcccCceE-EEECCEEEEEeCCCCCCCccccEEEEEeCCCC---cEEECCCC-ccccccccEEEECCEEEEECC
Confidence 654 34555544 55699999999987654 34789999999887 66666554 789999999999999999999
Q ss_pred cCCCCCCcccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCCCcCcC
Q 001895 352 ALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLD 431 (999)
Q Consensus 352 ~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~~~~l~ 431 (999)
.++.. ..+++++||+++++|+.+..+ |.+|..|++++++++|||+||.++...++
T Consensus 213 ~~~~~----~~~~~~~yd~~~~~W~~~~~~---------------------~~~r~~~~~~~~~~~i~v~GG~~~~~~~~ 267 (302)
T 2xn4_A 213 HDGPL----VRKSVEVYDPTTNAWRQVADM---------------------NMCRRNAGVCAVNGLLYVVGGDDGSCNLA 267 (302)
T ss_dssp BSSSS----BCCCEEEEETTTTEEEEECCC---------------------SSCCBSCEEEEETTEEEEECCBCSSSBCC
T ss_pred CCCCc----ccceEEEEeCCCCCEeeCCCC---------------------CCccccCeEEEECCEEEEECCcCCCcccc
Confidence 87643 268899999999999999876 56899999999999999999998888899
Q ss_pred cEEEeeccc
Q 001895 432 DLLVAEDLA 440 (999)
Q Consensus 432 Dv~~ld~~~ 440 (999)
+++++|...
T Consensus 268 ~v~~yd~~~ 276 (302)
T 2xn4_A 268 SVEYYNPTT 276 (302)
T ss_dssp CEEEEETTT
T ss_pred cEEEEcCCC
Confidence 999998754
No 11
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=7.2e-36 Score=331.74 Aligned_cols=258 Identities=19% Similarity=0.299 Sum_probs=224.5
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcc
Q 001895 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (999)
Q Consensus 113 ~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG 192 (999)
.+.||+|||.. ..+++++||+.+++|+.+..+ |.+|.+|++++++++|||+||
T Consensus 11 ~~~l~~~GG~~------------------------~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~~~lyv~GG 63 (306)
T 3ii7_A 11 HDYRIALFGGS------------------------QPQSCRYFNPKDYSWTDIRCP---FEKRRDAACVFWDNVVYILGG 63 (306)
T ss_dssp CCEEEEEECCS------------------------STTSEEEEETTTTEEEECCCC---SCCCBSCEEEEETTEEEEECC
T ss_pred cceEEEEeCCC------------------------CCceEEEecCCCCCEecCCCC---CcccceeEEEEECCEEEEEeC
Confidence 47899999964 256999999999999999765 789999999999999999999
Q ss_pred cCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCC-CCCCCCeEEEEECCCCCceEEEc
Q 001895 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGND-GKRPLADVWALDTAAKPYEWRKL 271 (999)
Q Consensus 193 ~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~-g~~~~ndv~~yDl~s~~~~W~~v 271 (999)
.. ....+++++||+.++ +|+.++ ++|.+|++|+++++++ +|||+||.+ +...++++|+||+.++ +|+.+
T Consensus 64 ~~--~~~~~~~~~~d~~~~--~W~~~~---~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~d~~~~--~W~~~ 133 (306)
T 3ii7_A 64 SQ--LFPIKRMDCYNVVKD--SWYSKL---GPPTPRDSLAACAAEG-KIYTSGGSEVGNSALYLFECYDTRTE--SWHTK 133 (306)
T ss_dssp BS--SSBCCEEEEEETTTT--EEEEEE---CCSSCCBSCEEEEETT-EEEEECCBBTTBSCCCCEEEEETTTT--EEEEE
T ss_pred CC--CCCcceEEEEeCCCC--eEEECC---CCCccccceeEEEECC-EEEEECCCCCCCcEeeeEEEEeCCCC--ceEeC
Confidence 87 566799999999986 599997 8999999999999987 899999997 6677999999999999 99999
Q ss_pred ccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCC---cccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEE
Q 001895 272 EPEGEGPPPCMYATASARSDGLLLLCGGRDASSVP---LASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHV 348 (999)
Q Consensus 272 ~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~---~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V 348 (999)
.+++ .+|..|.+ +..+++||++||.+..... +++++.|+..++ +|...+.+ |.+|..|++++++++|||
T Consensus 134 ~~~p---~~r~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~---~W~~~~~~-p~~r~~~~~~~~~~~i~v 205 (306)
T 3ii7_A 134 PSML---TQRCSHGM-VEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATE---TWTELCPM-IEARKNHGLVFVKDKIFA 205 (306)
T ss_dssp CCCS---SCCBSCEE-EEETTEEEEECCEESCTTTCEECCCEEEEETTTT---EEEEECCC-SSCCBSCEEEEETTEEEE
T ss_pred CCCc---CCcceeEE-EEECCEEEEECCCCCCCCcccccceEEEeCCCCC---eEEECCCc-cchhhcceEEEECCEEEE
Confidence 7653 44555555 4569999999998766533 899999999988 66676654 789999999999999999
Q ss_pred EcCcCCCCCCcccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCCCc
Q 001895 349 SGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGV 428 (999)
Q Consensus 349 ~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~~~ 428 (999)
+||.+... ..+++++||+++++|+.+..+ |.+|..|++++++++|||+||+++..
T Consensus 206 ~GG~~~~~----~~~~~~~yd~~~~~W~~~~~~---------------------p~~r~~~~~~~~~~~i~v~GG~~~~~ 260 (306)
T 3ii7_A 206 VGGQNGLG----GLDNVEYYDIKLNEWKMVSPM---------------------PWKGVTVKCAAVGSIVYVLAGFQGVG 260 (306)
T ss_dssp ECCEETTE----EBCCEEEEETTTTEEEECCCC---------------------SCCBSCCEEEEETTEEEEEECBCSSS
T ss_pred EeCCCCCC----CCceEEEeeCCCCcEEECCCC---------------------CCCccceeEEEECCEEEEEeCcCCCe
Confidence 99987653 268899999999999999876 67999999999999999999998888
Q ss_pred CcCcEEEeeccc
Q 001895 429 LLDDLLVAEDLA 440 (999)
Q Consensus 429 ~l~Dv~~ld~~~ 440 (999)
.+++++++|...
T Consensus 261 ~~~~~~~yd~~~ 272 (306)
T 3ii7_A 261 RLGHILEYNTET 272 (306)
T ss_dssp BCCEEEEEETTT
T ss_pred eeeeEEEEcCCC
Confidence 899999999754
No 12
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.6e-35 Score=327.98 Aligned_cols=262 Identities=21% Similarity=0.327 Sum_probs=225.6
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcc
Q 001895 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (999)
Q Consensus 113 ~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG 192 (999)
+++||+|||...... .++++++||+.+++|..++.+ |.+|.+|++++++++||++||
T Consensus 14 ~~~i~~~GG~~~~~~--------------------~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~~~l~v~GG 70 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQS--------------------PIDVVEKYDPKTQEWSFLPSI---TRKRRYVASVSLHDRIYVIGG 70 (301)
T ss_dssp CEEEEEECCEETTTE--------------------ECCCEEEEETTTTEEEECCCC---SSCCBSCEEEEETTEEEEECC
T ss_pred CCEEEEEeCccCCCc--------------------ceeEEEEEcCCCCeEEeCCCC---ChhhccccEEEECCEEEEEcC
Confidence 679999999432221 788999999999999999865 789999999999999999999
Q ss_pred cCCCCCCcCcEEEEecCCCCCc---eEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEE
Q 001895 193 IGPAGLSAEDLHVLDLTQQRPR---WHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWR 269 (999)
Q Consensus 193 ~~~~~~~~~dv~vyD~~t~t~k---W~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~ 269 (999)
.. .....+++++||+.++ + |+.++ ++|.+|..|+++++++ +||++||.++...++++|+||+.++ +|+
T Consensus 71 ~~-~~~~~~~~~~~d~~~~--~~~~W~~~~---~~p~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~d~~~~--~W~ 141 (301)
T 2vpj_A 71 YD-GRSRLSSVECLDYTAD--EDGVWYSVA---PMNVRRGLAGATTLGD-MIYVSGGFDGSRRHTSMERYDPNID--QWS 141 (301)
T ss_dssp BC-SSCBCCCEEEEETTCC--TTCCCEEEC---CCSSCCBSCEEEEETT-EEEEECCBCSSCBCCEEEEEETTTT--EEE
T ss_pred CC-CCccCceEEEEECCCC--CCCeeEECC---CCCCCccceeEEEECC-EEEEEcccCCCcccceEEEEcCCCC--eEE
Confidence 86 3456789999999885 6 99996 8999999999999987 8999999998888999999999999 999
Q ss_pred EcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEE
Q 001895 270 KLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVS 349 (999)
Q Consensus 270 ~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~ 349 (999)
.+.+++ .+|..|.++ ..+++||++||.++.. .+++++.|++.++ +|.....+ |.+|..|+++.++++|||+
T Consensus 142 ~~~~~p---~~r~~~~~~-~~~~~iyv~GG~~~~~-~~~~~~~~d~~~~---~W~~~~~~-p~~r~~~~~~~~~~~i~v~ 212 (301)
T 2vpj_A 142 MLGDMQ---TAREGAGLV-VASGVIYCLGGYDGLN-ILNSVEKYDPHTG---HWTNVTPM-ATKRSGAGVALLNDHIYVV 212 (301)
T ss_dssp EEEECS---SCCBSCEEE-EETTEEEEECCBCSSC-BCCCEEEEETTTT---EEEEECCC-SSCCBSCEEEEETTEEEEE
T ss_pred ECCCCC---CCcccceEE-EECCEEEEECCCCCCc-ccceEEEEeCCCC---cEEeCCCC-CcccccceEEEECCEEEEE
Confidence 997654 345555554 5599999999987765 6899999999887 66666554 7899999999999999999
Q ss_pred cCcCCCCCCcccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCCCcC
Q 001895 350 GGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVL 429 (999)
Q Consensus 350 GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~~~~ 429 (999)
||.+.... .+++++||+++++|..+..+ |.+|+.|++++++++|||+||+++...
T Consensus 213 GG~~~~~~----~~~v~~yd~~~~~W~~~~~~---------------------p~~r~~~~~~~~~~~i~v~GG~~~~~~ 267 (301)
T 2vpj_A 213 GGFDGTAH----LSSVEAYNIRTDSWTTVTSM---------------------TTPRCYVGATVLRGRLYAIAGYDGNSL 267 (301)
T ss_dssp CCBCSSSB----CCCEEEEETTTTEEEEECCC---------------------SSCCBSCEEEEETTEEEEECCBCSSSB
T ss_pred eCCCCCcc----cceEEEEeCCCCcEEECCCC---------------------CCcccceeEEEECCEEEEEcCcCCCcc
Confidence 99876542 78999999999999999876 679999999999999999999988888
Q ss_pred cCcEEEeeccc
Q 001895 430 LDDLLVAEDLA 440 (999)
Q Consensus 430 l~Dv~~ld~~~ 440 (999)
+++++++|...
T Consensus 268 ~~~v~~yd~~~ 278 (301)
T 2vpj_A 268 LSSIECYDPII 278 (301)
T ss_dssp EEEEEEEETTT
T ss_pred cccEEEEcCCC
Confidence 89999999653
No 13
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=2.8e-36 Score=342.52 Aligned_cols=280 Identities=18% Similarity=0.209 Sum_probs=223.0
Q ss_pred CCCCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECC--CCcEE
Q 001895 86 EDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVL--TNKWS 163 (999)
Q Consensus 86 ~~~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~--t~~W~ 163 (999)
...|.+|.+|+++.+ +++||||||.. .+++|+||+. +++|+
T Consensus 4 ~~lP~~r~~~~~~~~------------~~~iyv~GG~~-------------------------~~~~~~~d~~~~~~~W~ 46 (357)
T 2uvk_A 4 PETPVPFKSGTGAID------------NDTVYIGLGSA-------------------------GTAWYKLDTQAKDKKWT 46 (357)
T ss_dssp CCCSSCCCSCEEEEE------------TTEEEEECGGG-------------------------TTCEEEEETTSSSCCEE
T ss_pred CCCCccccceEEEEE------------CCEEEEEeCcC-------------------------CCeEEEEccccCCCCee
Confidence 467999999999998 79999999963 2489999998 49999
Q ss_pred EecCCCCCC-CCCcCcEEEEeCCEEEEEcccC----CCCCCcCcEEEEecCCCCCceEEEeecCCCC-CCCcccEEEEEC
Q 001895 164 RITPFGEPP-TPRAAHVATAVGTMVVIQGGIG----PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP-GPRYGHVMALVG 237 (999)
Q Consensus 164 ~l~~~g~~P-~pR~~hsa~~~g~~iyv~GG~~----~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P-~~R~~h~~~v~~ 237 (999)
.++.+ | .+|.+|++++++++||||||.+ ......+++|+||+.++ +|+.++ +++ .+|++|++++++
T Consensus 47 ~~~~~---p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~--~W~~~~---~~~p~~r~~~~~~~~~ 118 (357)
T 2uvk_A 47 ALAAF---PGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN--SWVKLM---SHAPMGMAGHVTFVHN 118 (357)
T ss_dssp ECCCC---TTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTT--EEEECS---CCCSSCCSSEEEEEET
T ss_pred ECCCC---CCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCC--cEEECC---CCCCcccccceEEEEC
Confidence 99876 6 7999999999999999999982 23345789999999996 599998 444 999999999988
Q ss_pred CcEEEEEccCCCC----------------------------------CCCCeEEEEECCCCCceEEEcccCCCCCCCccc
Q 001895 238 QRYLMAIGGNDGK----------------------------------RPLADVWALDTAAKPYEWRKLEPEGEGPPPCMY 283 (999)
Q Consensus 238 ~~~Lyv~GG~~g~----------------------------------~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~ 283 (999)
+ +|||+||.++. ..++++++||+.++ +|+.+.+++ .+++.
T Consensus 119 ~-~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~--~W~~~~~~p---~~~~~ 192 (357)
T 2uvk_A 119 G-KAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQ--QWSYAGESP---WYGTA 192 (357)
T ss_dssp T-EEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTT--EEEEEEECS---SCCCB
T ss_pred C-EEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCC--cEEECCCCC---CCCcc
Confidence 7 89999998754 25789999999999 999997653 34566
Q ss_pred eEEEEEeCCEEEEEeccCCCCCCcccEEEEec--CCCCeEEEEECCCCC-CCCcceeEEEEECCEEEEEcCcCCCCC---
Q 001895 284 ATASARSDGLLLLCGGRDASSVPLASAYGLAK--HRDGRWEWAIAPGVS-PSPRYQHAAVFVNARLHVSGGALGGGR--- 357 (999)
Q Consensus 284 ~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~--~~~~~W~w~~~~g~~-P~~R~~hsav~~~~~L~V~GG~~~~~~--- 357 (999)
++++++.+++||+|||.+......++++.|+. .++ +|.....++ |..|..|++++++++|||+||.+..+.
T Consensus 193 ~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~---~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~ 269 (357)
T 2uvk_A 193 GAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNL---KWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSREN 269 (357)
T ss_dssp SCEEEEETTEEEEECCEEETTEECCCEEEEECC---C---EEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHH
T ss_pred cccEEEECCEEEEEeeecCCCcccCceEEEEecCCCC---cEEecCCCCCCcccccceEEEECCEEEEEcCccccCCccc
Confidence 56666679999999998766556788988875 545 666666542 345678889999999999999754321
Q ss_pred ----------CcccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCCC
Q 001895 358 ----------MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGG 427 (999)
Q Consensus 358 ----------~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~~ 427 (999)
.....+++++||+++++|+.+..+ |.+|+.|++++++++||||||++..
T Consensus 270 ~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~---------------------p~~r~~~~~~~~~~~i~v~GG~~~~ 328 (357)
T 2uvk_A 270 YQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGEL---------------------SQGRAYGVSLPWNNSLLIIGGETAG 328 (357)
T ss_dssp HHTTCSSTTTTCCCEECCEEEECC---CEEEEEC---------------------SSCCBSSEEEEETTEEEEEEEECGG
T ss_pred ccccceeccccccceeeEEEEecCCCceeeCCCC---------------------CCCcccceeEEeCCEEEEEeeeCCC
Confidence 011246799999999999999877 6799999999999999999998754
Q ss_pred -cCcCcEEEeeccc
Q 001895 428 -VLLDDLLVAEDLA 440 (999)
Q Consensus 428 -~~l~Dv~~ld~~~ 440 (999)
..++|++.++...
T Consensus 329 ~~~~~~v~~l~~~~ 342 (357)
T 2uvk_A 329 GKAVTDSVLITVKD 342 (357)
T ss_dssp GCEEEEEEEEEC-C
T ss_pred CCEeeeEEEEEEcC
Confidence 4589999887653
No 14
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1e-34 Score=321.73 Aligned_cols=254 Identities=19% Similarity=0.310 Sum_probs=216.2
Q ss_pred CCCCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEe
Q 001895 86 EDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRI 165 (999)
Q Consensus 86 ~~~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l 165 (999)
...|.+|.+|+++.+ +++||||||..... .++++++||+.+++|+.+
T Consensus 46 ~~~p~~r~~~~~~~~------------~~~lyv~GG~~~~~---------------------~~~~~~~~d~~~~~W~~~ 92 (302)
T 2xn4_A 46 AELPSRRCRAGMVYM------------AGLVFAVGGFNGSL---------------------RVRTVDSYDPVKDQWTSV 92 (302)
T ss_dssp CCCSSCCBSCEEEEE------------TTEEEEESCBCSSS---------------------BCCCEEEEETTTTEEEEE
T ss_pred ccCCcccccceEEEE------------CCEEEEEeCcCCCc---------------------cccceEEECCCCCceeeC
Confidence 578999999999988 78999999986432 678999999999999999
Q ss_pred cCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEc
Q 001895 166 TPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIG 245 (999)
Q Consensus 166 ~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~G 245 (999)
..+ |.+|..|++++++++||++||... ....+++++||+.++ +|+.++ ++|.+|+.|+++++++ +||++|
T Consensus 93 ~~~---p~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~~d~~~~--~W~~~~---~~p~~r~~~~~~~~~~-~iyv~G 162 (302)
T 2xn4_A 93 ANM---RDRRSTLGAAVLNGLLYAVGGFDG-STGLSSVEAYNIKSN--EWFHVA---PMNTRRSSVGVGVVGG-LLYAVG 162 (302)
T ss_dssp CCC---SSCCBSCEEEEETTEEEEEEEECS-SCEEEEEEEEETTTT--EEEEEC---CCSSCCBSCEEEEETT-EEEEEC
T ss_pred CCC---CccccceEEEEECCEEEEEcCCCC-CccCceEEEEeCCCC--eEeecC---CCCCcccCceEEEECC-EEEEEe
Confidence 875 789999999999999999999864 345689999999986 599997 8899999999999988 899999
Q ss_pred cCCCCC--CCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEE
Q 001895 246 GNDGKR--PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEW 323 (999)
Q Consensus 246 G~~g~~--~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w 323 (999)
|.++.. .++++++||+.++ +|+.+.++ |.+|..| ++++.+++||++||.++.. ..++++.|+..++ +|
T Consensus 163 G~~~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~-~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~---~W 232 (302)
T 2xn4_A 163 GYDVASRQCLSTVECYNATTN--EWTYIAEM---STRRSGA-GVGVLNNLLYAVGGHDGPL-VRKSVEVYDPTTN---AW 232 (302)
T ss_dssp CEETTTTEECCCEEEEETTTT--EEEEECCC---SSCCBSC-EEEEETTEEEEECCBSSSS-BCCCEEEEETTTT---EE
T ss_pred CCCCCCCccccEEEEEeCCCC--cEEECCCC---ccccccc-cEEEECCEEEEECCCCCCc-ccceEEEEeCCCC---CE
Confidence 997654 4899999999999 99999765 3445555 4455699999999987654 5789999999887 66
Q ss_pred EECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcc-cCcCCCCCCCcccccCCCCCccC
Q 001895 324 AIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTK-SVVTSPRTGRYSADAAGGDAAVE 402 (999)
Q Consensus 324 ~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~-~~~~~p~~~~~~~~~~~~~~~~~ 402 (999)
.....+ |.+|..|+++.++++|||+||.+... ..+++++||+++++|+.++ .+
T Consensus 233 ~~~~~~-~~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~~--------------------- 286 (302)
T 2xn4_A 233 RQVADM-NMCRRNAGVCAVNGLLYVVGGDDGSC----NLASVEYYNPTTDKWTVVSSCM--------------------- 286 (302)
T ss_dssp EEECCC-SSCCBSCEEEEETTEEEEECCBCSSS----BCCCEEEEETTTTEEEECSSCC---------------------
T ss_pred eeCCCC-CCccccCeEEEECCEEEEECCcCCCc----ccccEEEEcCCCCeEEECCccc---------------------
Confidence 666654 68999999999999999999987543 2789999999999999987 44
Q ss_pred CCCcceeEEEEECCEE
Q 001895 403 LTRRCRHAAAAVGDLI 418 (999)
Q Consensus 403 p~~R~~hsa~~~~~~L 418 (999)
|.+|+.|++++++++|
T Consensus 287 ~~~r~~~~~~~~~~~i 302 (302)
T 2xn4_A 287 STGRSYAGVTVIDKRL 302 (302)
T ss_dssp SSCCBSCEEEEEEC--
T ss_pred CcccccceEEEecccC
Confidence 6799999999998765
No 15
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.4e-34 Score=321.46 Aligned_cols=254 Identities=19% Similarity=0.238 Sum_probs=219.6
Q ss_pred ccCCCCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEE
Q 001895 84 KKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWS 163 (999)
Q Consensus 84 ~~~~~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~ 163 (999)
.....|.+|.+|+++.+ +++||||||.. .. .++++++||+.+++|+
T Consensus 38 ~~~~~p~~r~~~~~~~~------------~~~lyv~GG~~-~~---------------------~~~~~~~~d~~~~~W~ 83 (306)
T 3ii7_A 38 DIRCPFEKRRDAACVFW------------DNVVYILGGSQ-LF---------------------PIKRMDCYNVVKDSWY 83 (306)
T ss_dssp ECCCCSCCCBSCEEEEE------------TTEEEEECCBS-SS---------------------BCCEEEEEETTTTEEE
T ss_pred cCCCCCcccceeEEEEE------------CCEEEEEeCCC-CC---------------------CcceEEEEeCCCCeEE
Confidence 44578999999999998 78999999986 21 7889999999999999
Q ss_pred EecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEE
Q 001895 164 RITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMA 243 (999)
Q Consensus 164 ~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv 243 (999)
.+..+ |.+|.+|++++++++|||+||........+++++||+.++ +|+.++ ++|.+|+.|+++++++ +||+
T Consensus 84 ~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~--~W~~~~---~~p~~r~~~~~~~~~~-~iyv 154 (306)
T 3ii7_A 84 SKLGP---PTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTE--SWHTKP---SMLTQRCSHGMVEANG-LIYV 154 (306)
T ss_dssp EEECC---SSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTT--EEEEEC---CCSSCCBSCEEEEETT-EEEE
T ss_pred ECCCC---CccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCC--ceEeCC---CCcCCcceeEEEEECC-EEEE
Confidence 99775 8999999999999999999998756667899999999986 599996 8999999999999988 8999
Q ss_pred EccCCCCCC----CCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCC
Q 001895 244 IGGNDGKRP----LADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDG 319 (999)
Q Consensus 244 ~GG~~g~~~----~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~ 319 (999)
+||.++... ++++|+||+.++ +|+.+.+++ .+|..|.++ ..+++||++||.+... .+++++.|+..++
T Consensus 155 ~GG~~~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p---~~r~~~~~~-~~~~~i~v~GG~~~~~-~~~~~~~yd~~~~- 226 (306)
T 3ii7_A 155 CGGSLGNNVSGRVLNSCEVYDPATE--TWTELCPMI---EARKNHGLV-FVKDKIFAVGGQNGLG-GLDNVEYYDIKLN- 226 (306)
T ss_dssp ECCEESCTTTCEECCCEEEEETTTT--EEEEECCCS---SCCBSCEEE-EETTEEEEECCEETTE-EBCCEEEEETTTT-
T ss_pred ECCCCCCCCcccccceEEEeCCCCC--eEEECCCcc---chhhcceEE-EECCEEEEEeCCCCCC-CCceEEEeeCCCC-
Confidence 999977665 899999999999 999998653 345555554 4599999999987664 5789999999988
Q ss_pred eEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCCC
Q 001895 320 RWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA 399 (999)
Q Consensus 320 ~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~ 399 (999)
+|..+..+ |.+|..|++++++++|||+||.+... ..+++++||+++++|..+..+
T Consensus 227 --~W~~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~~~~yd~~~~~W~~~~~~------------------ 281 (306)
T 3ii7_A 227 --EWKMVSPM-PWKGVTVKCAAVGSIVYVLAGFQGVG----RLGHILEYNTETDKWVANSKV------------------ 281 (306)
T ss_dssp --EEEECCCC-SCCBSCCEEEEETTEEEEEECBCSSS----BCCEEEEEETTTTEEEEEEEE------------------
T ss_pred --cEEECCCC-CCCccceeEEEECCEEEEEeCcCCCe----eeeeEEEEcCCCCeEEeCCCc------------------
Confidence 77777655 78999999999999999999987654 378999999999999999887
Q ss_pred ccCCCCcceeEEEEECC
Q 001895 400 AVELTRRCRHAAAAVGD 416 (999)
Q Consensus 400 ~~~p~~R~~hsa~~~~~ 416 (999)
|.+|.+|+++++.+
T Consensus 282 ---~~~r~~~~~~~~~~ 295 (306)
T 3ii7_A 282 ---RAFPVTSCLICVVD 295 (306)
T ss_dssp ---ECCSCTTCEEEEEE
T ss_pred ---ccccceeEEEEECC
Confidence 56899999888744
No 16
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=2.6e-34 Score=320.00 Aligned_cols=256 Identities=22% Similarity=0.342 Sum_probs=217.2
Q ss_pred ccCCCCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEE
Q 001895 84 KKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWS 163 (999)
Q Consensus 84 ~~~~~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~ 163 (999)
.....|.+|.+|+++.+ +++||||||....... ...++++++||+.+++|+
T Consensus 53 ~~~~~p~~r~~~~~~~~------------~~~lyv~GG~~~~~~~-----------------~~~~~~~~~~d~~~~~W~ 103 (308)
T 1zgk_A 53 RLADLQVPRSGLAGCVV------------GGLLYAVGGRNNSPDG-----------------NTDSSALDCYNPMTNQWS 103 (308)
T ss_dssp ECCCCSSCCBSCEEEEE------------TTEEEEECCEEEETTE-----------------EEECCCEEEEETTTTEEE
T ss_pred ECCCCCcccccceEEEE------------CCEEEEECCCcCCCCC-----------------CeecceEEEECCCCCeEe
Confidence 33578999999999988 7899999997311000 017789999999999999
Q ss_pred EecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEE
Q 001895 164 RITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMA 243 (999)
Q Consensus 164 ~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv 243 (999)
++.++ |.+|..|++++++++|||+||.... ...+++++||+.++ +|+.++ ++|.+|++|+++++++ +||+
T Consensus 104 ~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~~~~--~W~~~~---~~p~~r~~~~~~~~~~-~iyv 173 (308)
T 1zgk_A 104 PCAPM---SVPRNRIGVGVIDGHIYAVGGSHGC-IHHNSVERYEPERD--EWHLVA---PMLTRRIGVGVAVLNR-LLYA 173 (308)
T ss_dssp ECCCC---SSCCBTCEEEEETTEEEEECCEETT-EECCCEEEEETTTT--EEEECC---CCSSCCBSCEEEEETT-EEEE
T ss_pred ECCCC---CcCccccEEEEECCEEEEEcCCCCC-cccccEEEECCCCC--eEeECC---CCCccccceEEEEECC-EEEE
Confidence 99875 7899999999999999999998643 35689999999986 599997 8899999999999987 9999
Q ss_pred EccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEE
Q 001895 244 IGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEW 323 (999)
Q Consensus 244 ~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w 323 (999)
+||.++...++++++||+.++ +|+.+.++ |.+|..|.++ +.+++||++||.++.. .+++++.|+..++ +|
T Consensus 174 ~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~~-~~~~~iyv~GG~~~~~-~~~~v~~yd~~~~---~W 243 (308)
T 1zgk_A 174 VGGFDGTNRLNSAECYYPERN--EWRMITAM---NTIRSGAGVC-VLHNCIYAAGGYDGQD-QLNSVERYDVETE---TW 243 (308)
T ss_dssp ECCBCSSCBCCCEEEEETTTT--EEEECCCC---SSCCBSCEEE-EETTEEEEECCBCSSS-BCCCEEEEETTTT---EE
T ss_pred EeCCCCCCcCceEEEEeCCCC--eEeeCCCC---CCccccceEE-EECCEEEEEeCCCCCC-ccceEEEEeCCCC---cE
Confidence 999998888999999999999 99999765 3446656554 4599999999998654 5899999999988 77
Q ss_pred EECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCCCccCC
Q 001895 324 AIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVEL 403 (999)
Q Consensus 324 ~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p 403 (999)
.....+ |.+|..|++++++++|||+||.+... ..+++++||+++++|+.+..+ |
T Consensus 244 ~~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~---------------------p 297 (308)
T 1zgk_A 244 TFVAPM-KHRRSALGITVHQGRIYVLGGYDGHT----FLDSVECYDPDTDTWSEVTRM---------------------T 297 (308)
T ss_dssp EECCCC-SSCCBSCEEEEETTEEEEECCBCSSC----BCCEEEEEETTTTEEEEEEEC---------------------S
T ss_pred EECCCC-CCCccceEEEEECCEEEEEcCcCCCc----ccceEEEEcCCCCEEeecCCC---------------------C
Confidence 777755 78999999999999999999987643 378999999999999999877 6
Q ss_pred CCcceeEEEEE
Q 001895 404 TRRCRHAAAAV 414 (999)
Q Consensus 404 ~~R~~hsa~~~ 414 (999)
.+|+.|+++++
T Consensus 298 ~~r~~~~~~~l 308 (308)
T 1zgk_A 298 SGRSGVGVAVT 308 (308)
T ss_dssp SCCBSCEEEEC
T ss_pred CCcccceeEeC
Confidence 79999999874
No 17
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=100.00 E-value=1.8e-36 Score=342.17 Aligned_cols=242 Identities=19% Similarity=0.209 Sum_probs=190.4
Q ss_pred HhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHhCCCCCCCCc--cceeEEEeccccCCCCChHHHHHHHHHhhh---cC
Q 001895 687 FSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDI--AYIDYLFLGDYVDRGQHSLETITLLLALKV---EY 761 (999)
Q Consensus 687 ~~~e~~~l~~~~~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~--~~~~~vfLGDyVDRG~~s~evl~ll~~lk~---~~ 761 (999)
|++|+++++...+|+|||||||++.+|.++|+..++++....| ....+||||||||||++++||+.+|++|+. ++
T Consensus 60 ~~~~~~~~~~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~evl~~l~~l~~~~~~~ 139 (342)
T 2z72_A 60 KQIMPDTYLGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMYQLDQQARDA 139 (342)
T ss_dssp TSCCCSEECCCCEEEEECCCTTCHHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHHHHHHHHHHHHHHHHT
T ss_pred cccCcceecCCCCEEEEECCCCCHHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 8899999999999999999999999999999999886543222 122799999999999999999999999996 79
Q ss_pred CCCEEEecCCccccchhhhcC----ChHHHHHHhCCccchhhhhh---hhhhhcccceeEEEcCcEEEecCCccCccc--
Q 001895 762 PNNVHLIRGNHEAADINALFG----FRIECIERMGERDGIWAWHR---INRLFNWLPLAALIEKKIICMHGGIGRSIN-- 832 (999)
Q Consensus 762 P~~v~llrGNHE~~~~~~~~g----f~~e~~~~~g~~~~~~~~~~---~~~~f~~LPlaa~i~~~il~vHgGi~~~~~-- 832 (999)
|.++++||||||.+.++..++ .+..+.+.++.. ...+|.. ..++|..||++++++ +++|||||++|.+.
T Consensus 140 ~~~v~~v~GNHE~~~l~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~L~~lP~~~~~~-~~~~vHgGl~p~~~~~ 217 (342)
T 2z72_A 140 GGMVHLLMGNHEQMVLGGDLRYVHQRYDIATTLINRP-YNKLYSADTEIGQWLRSKNTIIKIN-DVLYMHGGISSEWISR 217 (342)
T ss_dssp TCEEEECCCHHHHHHHHTCCTTSCTTHHHHHHHTTSC-GGGGGSTTBHHHHHHHTCCSEEEET-TEEEESSCCCHHHHHT
T ss_pred CCeEEEEecCCcHHHhhCcccccccccchHHHHhccc-HHHHHHHhHHHHHHHhhCCeEEEEC-CEEEEECCCChhhccc
Confidence 999999999999998864211 222222223221 2346554 445566669999887 79999999999864
Q ss_pred --CHHHhhhccCCccc-----CCCCceeeecccCCCCCCCCCCCCccCCCCCCceeeCHHHHHHHHHHcCCcEEEEeccc
Q 001895 833 --HVEQIENLQRPITM-----EAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHEC 905 (999)
Q Consensus 833 --~~~~i~~i~rp~~~-----~~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~ 905 (999)
++++|+.+.|+... ... ..++++||+||.. .| .||.....||++++++||+.+++++|||||++
T Consensus 218 ~~~l~~i~~~~r~~~~~~~~~~~~-~~~~~~lwsd~~~-----~w---~R~~~~~~fg~~~~~~fl~~~~~~~IV~GHt~ 288 (342)
T 2z72_A 218 ELTLDKANALYRANVDASKKSLKA-DDLLNFLFFGNGP-----TW---YRGYFSETFTEAELDTILQHFNVNHIVVGHTS 288 (342)
T ss_dssp TCCHHHHHHHHHHHTTSCHHHHHH-SHHHHHHHSTTST-----TT---CCGGGSTTCCHHHHHHHHHHHTCSEEEECSSC
T ss_pred CCCHHHHHHHhhhhcccccccccc-CHHHHhccCCCCC-----CC---cCCcccccCChHHHHHHHHHCCCcEEEECCCc
Confidence 89999998886321 111 2567999999864 24 46662246999999999999999999999999
Q ss_pred cccceEEecCCeEEEEecccccCCCCCCeEEEEEEcCCc
Q 001895 906 VMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL 944 (999)
Q Consensus 906 ~~~G~~~~~~~~~iTvFSa~~y~~~~~n~ga~l~~~~~~ 944 (999)
+++ +...+++++|||||+++|. |.+++|.|+++.
T Consensus 289 ~~~-~~~~~~~~~i~Idsg~~~g----g~la~l~i~~~~ 322 (342)
T 2z72_A 289 QER-VLGLFHNKVIAVDSSIKVG----KSGELLLLENNR 322 (342)
T ss_dssp CSS-CEEETTTTEEECCCCGGGS----SCCCEEEEETTE
T ss_pred ccc-hhhhcCCCEEEEECCCCCC----CcEEEEEEECCE
Confidence 976 6677899999999999994 667888887763
No 18
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=6.5e-35 Score=325.78 Aligned_cols=267 Identities=18% Similarity=0.255 Sum_probs=220.3
Q ss_pred CCCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEec
Q 001895 87 DGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRIT 166 (999)
Q Consensus 87 ~~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l~ 166 (999)
..|.+|.+|+++.+ +++||||||........ .....+++++||+.+++|+.++
T Consensus 31 ~~p~~r~~~~~~~~------------~~~iyv~GG~~~~~~~~---------------~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 31 SSQVPKNHVSLVTK------------ENQVFVAGGLFYNEDNK---------------EDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp CCCSCSSEEEEECT------------TCCEEEEEEEEECSSCS---------------SSCEEEEEEEEETTTTEEEECC
T ss_pred CCCCCccceEEEEE------------CCEEEEEcCcccCCCCC---------------ccccccceEEecCCCCeEEECC
Confidence 44789999999987 78999999963211100 0015678999999999999997
Q ss_pred CCCCCCCCCcCcEEEEeCCEEEEEcccC--CCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEE
Q 001895 167 PFGEPPTPRAAHVATAVGTMVVIQGGIG--PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAI 244 (999)
Q Consensus 167 ~~g~~P~pR~~hsa~~~g~~iyv~GG~~--~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~ 244 (999)
++ |.+|.+|++++++++|||+||.. ......+++++||+.++ +|+.++ ++|.+|++|+++++++ +|||+
T Consensus 84 ~~---p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~--~W~~~~---~~p~~r~~~~~~~~~~-~iyv~ 154 (315)
T 4asc_A 84 PL---PSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSF--KWGESD---PLPYVVYGHTVLSHMD-LVYVI 154 (315)
T ss_dssp CB---SSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTT--EEEECC---CCSSCCBSCEEEEETT-EEEEE
T ss_pred CC---CcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCC--cEeECC---CCCCcccceeEEEECC-EEEEE
Confidence 75 89999999999999999999975 34567899999999986 599987 8999999999999998 89999
Q ss_pred ccC-CCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEE
Q 001895 245 GGN-DGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEW 323 (999)
Q Consensus 245 GG~-~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w 323 (999)
||. ++...++++|+||+.++ +|+.++++ |.+|..|.++ ..+++||++||.+... .+++++.|++.++ +|
T Consensus 155 GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~~-~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~---~W 224 (315)
T 4asc_A 155 GGKGSDRKCLNKMCVYDPKKF--EWKELAPM---QTARSLFGAT-VHDGRIIVAAGVTDTG-LTSSAEVYSITDN---KW 224 (315)
T ss_dssp CCBCTTSCBCCCEEEEETTTT--EEEECCCC---SSCCBSCEEE-EETTEEEEEEEECSSS-EEEEEEEEETTTT---EE
T ss_pred eCCCCCCcccceEEEEeCCCC--eEEECCCC---CCchhceEEE-EECCEEEEEeccCCCC-ccceEEEEECCCC---eE
Confidence 999 56677999999999999 99999865 3445555554 5599999999997765 5789999999887 66
Q ss_pred EECCCCCCCCcceeEEEEECCEEEEEcCcCCC----CC-CcccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCC
Q 001895 324 AIAPGVSPSPRYQHAAVFVNARLHVSGGALGG----GR-MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGD 398 (999)
Q Consensus 324 ~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~----~~-~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~ 398 (999)
.....+ |.+|..|+++.++++|||+||.+.. +. .....+++++||+++++|+.+.
T Consensus 225 ~~~~~~-p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~------------------- 284 (315)
T 4asc_A 225 APFEAF-PQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVL------------------- 284 (315)
T ss_dssp EEECCC-SSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEE-------------------
T ss_pred EECCCC-CCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhc-------------------
Confidence 666654 7999999999999999999998542 11 0123688999999999999983
Q ss_pred CccCCCCcceeEEEEECCEEEEEcC
Q 001895 399 AAVELTRRCRHAAAAVGDLIFIYGG 423 (999)
Q Consensus 399 ~~~~p~~R~~hsa~~~~~~LyV~GG 423 (999)
+.+|..|++++++++|||+..
T Consensus 285 ----~~~r~~~~~~~~~~~l~v~~~ 305 (315)
T 4asc_A 285 ----REIAYAAGATFLPVRLNVLRL 305 (315)
T ss_dssp ----SCSSCCSSCEEEEEEECGGGS
T ss_pred ----cCCcCccceEEeCCEEEEEEe
Confidence 348999999999999999875
No 19
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=9.2e-34 Score=313.75 Aligned_cols=251 Identities=21% Similarity=0.344 Sum_probs=216.4
Q ss_pred CCCCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCc---E
Q 001895 86 EDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNK---W 162 (999)
Q Consensus 86 ~~~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~---W 162 (999)
...|.+|.+|+++.+ +++||+|||..... .++++++||+.+++ |
T Consensus 47 ~~~p~~r~~~~~~~~------------~~~l~v~GG~~~~~---------------------~~~~~~~~d~~~~~~~~W 93 (301)
T 2vpj_A 47 PSITRKRRYVASVSL------------HDRIYVIGGYDGRS---------------------RLSSVECLDYTADEDGVW 93 (301)
T ss_dssp CCCSSCCBSCEEEEE------------TTEEEEECCBCSSC---------------------BCCCEEEEETTCCTTCCC
T ss_pred CCCChhhccccEEEE------------CCEEEEEcCCCCCc---------------------cCceEEEEECCCCCCCee
Confidence 467889999999998 78999999986432 78899999999999 9
Q ss_pred EEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEE
Q 001895 163 SRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLM 242 (999)
Q Consensus 163 ~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Ly 242 (999)
+.+..+ |.+|..|++++++++||++||.... ...+++++||+.++ +|+.++ ++|.+|..|+++++++ +||
T Consensus 94 ~~~~~~---p~~r~~~~~~~~~~~lyv~GG~~~~-~~~~~~~~~d~~~~--~W~~~~---~~p~~r~~~~~~~~~~-~iy 163 (301)
T 2vpj_A 94 YSVAPM---NVRRGLAGATTLGDMIYVSGGFDGS-RRHTSMERYDPNID--QWSMLG---DMQTAREGAGLVVASG-VIY 163 (301)
T ss_dssp EEECCC---SSCCBSCEEEEETTEEEEECCBCSS-CBCCEEEEEETTTT--EEEEEE---ECSSCCBSCEEEEETT-EEE
T ss_pred EECCCC---CCCccceeEEEECCEEEEEcccCCC-cccceEEEEcCCCC--eEEECC---CCCCCcccceEEEECC-EEE
Confidence 999765 7899999999999999999998643 34789999999986 599997 7899999999999987 899
Q ss_pred EEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEE
Q 001895 243 AIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWE 322 (999)
Q Consensus 243 v~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~ 322 (999)
++||.++...++++++||+.++ +|+.+.++ |.+|..|.+ +..+++||++||.+... .+++++.|+..++ +
T Consensus 164 v~GG~~~~~~~~~~~~~d~~~~--~W~~~~~~---p~~r~~~~~-~~~~~~i~v~GG~~~~~-~~~~v~~yd~~~~---~ 233 (301)
T 2vpj_A 164 CLGGYDGLNILNSVEKYDPHTG--HWTNVTPM---ATKRSGAGV-ALLNDHIYVVGGFDGTA-HLSSVEAYNIRTD---S 233 (301)
T ss_dssp EECCBCSSCBCCCEEEEETTTT--EEEEECCC---SSCCBSCEE-EEETTEEEEECCBCSSS-BCCCEEEEETTTT---E
T ss_pred EECCCCCCcccceEEEEeCCCC--cEEeCCCC---CcccccceE-EEECCEEEEEeCCCCCc-ccceEEEEeCCCC---c
Confidence 9999998888999999999999 99999755 444555554 45599999999998765 4889999999887 6
Q ss_pred EEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCCCccC
Q 001895 323 WAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVE 402 (999)
Q Consensus 323 w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~ 402 (999)
|.....+ |.+|..|++++++++|||+||.+... ..+++++||+++++|..+..+
T Consensus 234 W~~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~--------------------- 287 (301)
T 2vpj_A 234 WTTVTSM-TTPRCYVGATVLRGRLYAIAGYDGNS----LLSSIECYDPIIDSWEVVTSM--------------------- 287 (301)
T ss_dssp EEEECCC-SSCCBSCEEEEETTEEEEECCBCSSS----BEEEEEEEETTTTEEEEEEEE---------------------
T ss_pred EEECCCC-CCcccceeEEEECCEEEEEcCcCCCc----ccccEEEEcCCCCeEEEcCCC---------------------
Confidence 6666654 78999999999999999999987643 268899999999999999887
Q ss_pred CCCcceeEEEEEC
Q 001895 403 LTRRCRHAAAAVG 415 (999)
Q Consensus 403 p~~R~~hsa~~~~ 415 (999)
|.+|+.|+++++.
T Consensus 288 ~~~r~~~~~~~~~ 300 (301)
T 2vpj_A 288 GTQRCDAGVCVLR 300 (301)
T ss_dssp EEEEESCEEEEEE
T ss_pred CcccccceEEEeC
Confidence 6799999999874
No 20
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=2.3e-34 Score=321.39 Aligned_cols=247 Identities=18% Similarity=0.267 Sum_probs=208.4
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccC-----CCCCCcCcEEEEecCCCCCceEEEeecCCCC
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIG-----PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~-----~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P 225 (999)
++++||+.+++|.. ..+ ..|.+|.+|++++++++|||+||.. ......+++++||+.++ +|+.++ ++|
T Consensus 14 ~~~~yd~~~~~W~~-~~~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~--~W~~~~---~~p 86 (315)
T 4asc_A 14 GAVAYDPAANECYC-ASL-SSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDS--EWLGMP---PLP 86 (315)
T ss_dssp EEEEEETTTTEEEE-EEC-CCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTT--EEEECC---CBS
T ss_pred ceEEECCCCCeEec-CCC-CCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCC--eEEECC---CCC
Confidence 89999999999997 333 2367999999999999999999962 22334567999999986 599987 899
Q ss_pred CCCcccEEEEECCcEEEEEccCC---CCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCC
Q 001895 226 GPRYGHVMALVGQRYLMAIGGND---GKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (999)
Q Consensus 226 ~~R~~h~~~v~~~~~Lyv~GG~~---g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~ 302 (999)
.+|++|+++++++ +|||+||.+ +...++++|+||+.++ +|+.+.+++ .+|..|+++ ..+++||++||.+.
T Consensus 87 ~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~~~~d~~~~--~W~~~~~~p---~~r~~~~~~-~~~~~iyv~GG~~~ 159 (315)
T 4asc_A 87 SPRCLFGLGEALN-SIYVVGGREIKDGERCLDSVMCYDRLSF--KWGESDPLP---YVVYGHTVL-SHMDLVYVIGGKGS 159 (315)
T ss_dssp SCEESCEEEEETT-EEEEECCEESSTTCCBCCCEEEEETTTT--EEEECCCCS---SCCBSCEEE-EETTEEEEECCBCT
T ss_pred cchhceeEEEECC-EEEEEeCCcCCCCCcccceEEEECCCCC--cEeECCCCC---CcccceeEE-EECCEEEEEeCCCC
Confidence 9999999999988 899999974 4677999999999999 999998653 445555554 56999999999966
Q ss_pred CCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccCc
Q 001895 303 SSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVV 382 (999)
Q Consensus 303 ~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~ 382 (999)
....+++++.|++.++ +|...+.+ |.+|..|++++++++|||+||.+.... .+++++||+++++|+.+..+
T Consensus 160 ~~~~~~~~~~yd~~~~---~W~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~~----~~~~~~yd~~~~~W~~~~~~- 230 (315)
T 4asc_A 160 DRKCLNKMCVYDPKKF---EWKELAPM-QTARSLFGATVHDGRIIVAAGVTDTGL----TSSAEVYSITDNKWAPFEAF- 230 (315)
T ss_dssp TSCBCCCEEEEETTTT---EEEECCCC-SSCCBSCEEEEETTEEEEEEEECSSSE----EEEEEEEETTTTEEEEECCC-
T ss_pred CCcccceEEEEeCCCC---eEEECCCC-CCchhceEEEEECCEEEEEeccCCCCc----cceEEEEECCCCeEEECCCC-
Confidence 6667899999999988 77777765 789999999999999999999876542 67999999999999999876
Q ss_pred CCCCCCCcccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCCC---------cCcCcEEEeeccc
Q 001895 383 TSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGG---------VLLDDLLVAEDLA 440 (999)
Q Consensus 383 ~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~~---------~~l~Dv~~ld~~~ 440 (999)
|.+|..|++++++++|||+||.++. ..++|+|++|...
T Consensus 231 --------------------p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~ 277 (315)
T 4asc_A 231 --------------------PQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEE 277 (315)
T ss_dssp --------------------SSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTT
T ss_pred --------------------CCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCC
Confidence 6799999999999999999997532 4689999999654
No 21
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=6.2e-34 Score=318.28 Aligned_cols=247 Identities=17% Similarity=0.280 Sum_probs=206.1
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCC-----CCCcCcEEEEecCCCCCceEEEeecCCCC
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPA-----GLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~-----~~~~~dv~vyD~~t~t~kW~~v~~~g~~P 225 (999)
++++||+.+++|...... .|.+|.+|++++++++||++||.... ....+++++||+.++ +|+.++ ++|
T Consensus 25 ~~~~yd~~~~~W~~~~~~--~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~--~W~~~~---~~p 97 (318)
T 2woz_A 25 AAVAYDPMENECYLTALA--EQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSS--EWVGLP---PLP 97 (318)
T ss_dssp EEEEEETTTTEEEEEEEC--TTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTT--EEEECS---CBS
T ss_pred ceEEECCCCCceecccCC--ccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCC--cEEECC---CCC
Confidence 479999999999985322 46899999999999999999996321 123456999999986 599986 899
Q ss_pred CCCcccEEEEECCcEEEEEccCC--CCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCC
Q 001895 226 GPRYGHVMALVGQRYLMAIGGND--GKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDAS 303 (999)
Q Consensus 226 ~~R~~h~~~v~~~~~Lyv~GG~~--g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~ 303 (999)
.+|+.|+++++++ +|||+||.+ +...++++|+||+.++ +|+.+.++ |.+|..|+++ +.+++||++||.+..
T Consensus 98 ~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~~-~~~~~iyv~GG~~~~ 170 (318)
T 2woz_A 98 SARCLFGLGEVDD-KIYVVAGKDLQTEASLDSVLCYDPVAA--KWSEVKNL---PIKVYGHNVI-SHNGMIYCLGGKTDD 170 (318)
T ss_dssp SCBCSCEEEEETT-EEEEEEEEBTTTCCEEEEEEEEETTTT--EEEEECCC---SSCEESCEEE-EETTEEEEECCEESS
T ss_pred ccccccceEEECC-EEEEEcCccCCCCcccceEEEEeCCCC--CEeECCCC---CCcccccEEE-EECCEEEEEcCCCCC
Confidence 9999999999987 899999986 4567899999999999 99999765 3445555554 479999999998766
Q ss_pred CCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccCcC
Q 001895 304 SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVT 383 (999)
Q Consensus 304 ~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~ 383 (999)
...+++++.|+..++ +|...+.+ |.+|..|++++++++|||+||.+... ..+++++||+++++|+.+..+
T Consensus 171 ~~~~~~~~~yd~~~~---~W~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~----~~~~~~~yd~~~~~W~~~~~~-- 240 (318)
T 2woz_A 171 KKCTNRVFIYNPKKG---DWKDLAPM-KTPRSMFGVAIHKGKIVIAGGVTEDG----LSASVEAFDLKTNKWEVMTEF-- 240 (318)
T ss_dssp SCBCCCEEEEETTTT---EEEEECCC-SSCCBSCEEEEETTEEEEEEEEETTE----EEEEEEEEETTTCCEEECCCC--
T ss_pred CCccceEEEEcCCCC---EEEECCCC-CCCcccceEEEECCEEEEEcCcCCCC----ccceEEEEECCCCeEEECCCC--
Confidence 667899999999988 66666654 78999999999999999999987643 267899999999999999876
Q ss_pred CCCCCCcccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCCC---------cCcCcEEEeeccc
Q 001895 384 SPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGG---------VLLDDLLVAEDLA 440 (999)
Q Consensus 384 ~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~~---------~~l~Dv~~ld~~~ 440 (999)
|.+|..|++++++++|||+||.+.. ..++|+|++|...
T Consensus 241 -------------------p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~ 287 (318)
T 2woz_A 241 -------------------PQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDK 287 (318)
T ss_dssp -------------------SSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTT
T ss_pred -------------------CCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCC
Confidence 6789999999999999999997642 4689999999754
No 22
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=4.5e-34 Score=319.42 Aligned_cols=267 Identities=17% Similarity=0.276 Sum_probs=217.5
Q ss_pred CCCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEec
Q 001895 87 DGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRIT 166 (999)
Q Consensus 87 ~~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l~ 166 (999)
..|.||.+|+++.+ +++||||||........ .....+++++||+.+++|+.+.
T Consensus 42 ~~~~~r~~~~~~~~------------~~~lyv~GG~~~~~~~~---------------~~~~~~~~~~~d~~~~~W~~~~ 94 (318)
T 2woz_A 42 AEQIPRNHSSIVTQ------------QNQVYVVGGLYVDEENK---------------DQPLQSYFFQLDNVSSEWVGLP 94 (318)
T ss_dssp CTTSCSSEEEEECS------------SSCEEEEESSCC----------------------CCCBEEEEEETTTTEEEECS
T ss_pred CccCCccceEEEEE------------CCEEEEECCcccCcccc---------------CCCccccEEEEeCCCCcEEECC
Confidence 45689999999887 78999999964321100 0014567999999999999997
Q ss_pred CCCCCCCCCcCcEEEEeCCEEEEEcccCC-CCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEc
Q 001895 167 PFGEPPTPRAAHVATAVGTMVVIQGGIGP-AGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIG 245 (999)
Q Consensus 167 ~~g~~P~pR~~hsa~~~g~~iyv~GG~~~-~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~G 245 (999)
.+ |.+|..|++++++++|||+||... .....+++++||+.++ +|+.+. ++|.+|++|+++++++ +|||+|
T Consensus 95 ~~---p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~--~W~~~~---~~p~~r~~~~~~~~~~-~iyv~G 165 (318)
T 2woz_A 95 PL---PSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAA--KWSEVK---NLPIKVYGHNVISHNG-MIYCLG 165 (318)
T ss_dssp CB---SSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTT--EEEEEC---CCSSCEESCEEEEETT-EEEEEC
T ss_pred CC---CccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCC--CEeECC---CCCCcccccEEEEECC-EEEEEc
Confidence 65 889999999999999999999863 4556789999999986 599997 8999999999999988 899999
Q ss_pred cCC-CCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEE
Q 001895 246 GND-GKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWA 324 (999)
Q Consensus 246 G~~-g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~ 324 (999)
|.+ +...++++|+||+.++ +|+.++++ |.+|..|.+ ++.+++||++||.+... .+++++.|+..++ +|.
T Consensus 166 G~~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~-~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~---~W~ 235 (318)
T 2woz_A 166 GKTDDKKCTNRVFIYNPKKG--DWKDLAPM---KTPRSMFGV-AIHKGKIVIAGGVTEDG-LSASVEAFDLKTN---KWE 235 (318)
T ss_dssp CEESSSCBCCCEEEEETTTT--EEEEECCC---SSCCBSCEE-EEETTEEEEEEEEETTE-EEEEEEEEETTTC---CEE
T ss_pred CCCCCCCccceEEEEcCCCC--EEEECCCC---CCCcccceE-EEECCEEEEEcCcCCCC-ccceEEEEECCCC---eEE
Confidence 984 4557899999999999 99999765 344555555 45699999999987654 5789999999877 677
Q ss_pred ECCCCCCCCcceeEEEEECCEEEEEcCcCCCCC-----CcccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCCC
Q 001895 325 IAPGVSPSPRYQHAAVFVNARLHVSGGALGGGR-----MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA 399 (999)
Q Consensus 325 ~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~-----~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~ 399 (999)
....+ |.+|..|++++++++|||+||.+.... .....+++|+||+++++|+.+ +
T Consensus 236 ~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~------------------ 294 (318)
T 2woz_A 236 VMTEF-PQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM--L------------------ 294 (318)
T ss_dssp ECCCC-SSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE--E------------------
T ss_pred ECCCC-CCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh--c------------------
Confidence 77654 789999999999999999999865210 012378999999999999998 3
Q ss_pred ccCCCCcceeEEEEECCEEEEEcC
Q 001895 400 AVELTRRCRHAAAAVGDLIFIYGG 423 (999)
Q Consensus 400 ~~~p~~R~~hsa~~~~~~LyV~GG 423 (999)
+.+|+.|++++++++|||+..
T Consensus 295 ---~~~r~~~~~~~~~~~iyi~~~ 315 (318)
T 2woz_A 295 ---KEIRYASGASCLATRLNLFKL 315 (318)
T ss_dssp ---SCCGGGTTCEEEEEEEEGGGC
T ss_pred ---ccccccccceeeCCEEEEEEe
Confidence 458999999999999999853
No 23
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=1.5e-33 Score=348.22 Aligned_cols=293 Identities=14% Similarity=0.169 Sum_probs=234.6
Q ss_pred CCCCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEe
Q 001895 86 EDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRI 165 (999)
Q Consensus 86 ~~~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l 165 (999)
...|..|++|+++ + +++||||||... . .++++|+||+.+++|+.+
T Consensus 383 ~~~p~rr~g~~~~-~------------~~~iyv~GG~~~-~---------------------~~~~v~~yd~~~~~W~~~ 427 (695)
T 2zwa_A 383 ECPINRKFGDVDV-A------------GNDVFYMGGSNP-Y---------------------RVNEILQLSIHYDKIDMK 427 (695)
T ss_dssp CCTTCCBSCEEEE-C------------SSCEEEECCBSS-S---------------------BCCCEEEEEECSSCEEEE
T ss_pred CCCCCCceeEEEE-E------------CCEEEEECCCCC-C---------------------CcCcEEEEECCCCeEEEe
Confidence 4677788888766 5 688999999865 2 778999999999999999
Q ss_pred c-C--CCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcE
Q 001895 166 T-P--FGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRY 240 (999)
Q Consensus 166 ~-~--~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~ 240 (999)
. + .+..|.+|.+|+++++ +++|||+||.+......+++|+||+.++ +|+.+. ++|.+|++|+++++.+++
T Consensus 428 ~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~--~W~~~~---~~p~~R~~h~~~~~~~~~ 502 (695)
T 2zwa_A 428 NIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTR--EWSMIK---SLSHTRFRHSACSLPDGN 502 (695)
T ss_dssp ECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTT--EEEECC---CCSBCCBSCEEEECTTSC
T ss_pred ccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCC--cEEECC---CCCCCcccceEEEEcCCE
Confidence 8 5 2456899999999999 9999999999776667899999999996 599996 899999999999973348
Q ss_pred EEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEe-C-CEEEEEeccCCCC-CCcccEEEEecCC
Q 001895 241 LMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS-D-GLLLLCGGRDASS-VPLASAYGLAKHR 317 (999)
Q Consensus 241 Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~-~-~~LyvfGG~~~~~-~~~~d~~~~~~~~ 317 (999)
|||+||.++.. ++|+||+.++ +|+.+.+.+..|.+|..|+++++. + ++||+|||..... ..++++|.|+..+
T Consensus 503 iyv~GG~~~~~---~v~~yd~~t~--~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~ 577 (695)
T 2zwa_A 503 VLILGGVTEGP---AMLLYNVTEE--IFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDA 577 (695)
T ss_dssp EEEECCBCSSC---SEEEEETTTT--EEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECT
T ss_pred EEEECCCCCCC---CEEEEECCCC--ceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccC
Confidence 99999998765 9999999999 999999877677788888766654 2 8999999986554 5689999999987
Q ss_pred CCeE----EEEECCCCCCCCcceeEEEEEC-CEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccCcCCCCCCCccc
Q 001895 318 DGRW----EWAIAPGVSPSPRYQHAAVFVN-ARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSA 392 (999)
Q Consensus 318 ~~~W----~w~~~~g~~P~~R~~hsav~~~-~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~ 392 (999)
+ +| +|.....+++.+|+.|++++++ ++|||+||.+.... ....+++++||+.+++|+.+...... +
T Consensus 578 ~-~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~-~~~~~~v~~yd~~t~~W~~~~~p~~~-----~-- 648 (695)
T 2zwa_A 578 E-NATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGL-FDRTNSIISLDPLSETLTSIPISRRI-----W-- 648 (695)
T ss_dssp T-CSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCC-CCTTTSEEEEETTTTEEEECCCCHHH-----H--
T ss_pred C-ccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCC-CCCCCeEEEEECCCCeEEEeeccccc-----c--
Confidence 7 43 4666655546899999999999 99999999875432 13478999999999999964322000 0
Q ss_pred ccCCCCCccCCCCcceeEEEEECC-EEEEEcC----CCCCcCcCcEEEeecc
Q 001895 393 DAAGGDAAVELTRRCRHAAAAVGD-LIFIYGG----LRGGVLLDDLLVAEDL 439 (999)
Q Consensus 393 ~~~~~~~~~~p~~R~~hsa~~~~~-~LyV~GG----~~~~~~l~Dv~~ld~~ 439 (999)
...+..+.+|+++.+++ +|||+|| ++-+.+++++|.+|+.
T Consensus 649 -------~~~~p~~~gh~~~~~~~g~i~v~GGg~~cfsfGt~~n~i~~ldl~ 693 (695)
T 2zwa_A 649 -------EDHSLMLAGFSLVSTSMGTIHIIGGGATCYGFGSVTNVGLKLIAI 693 (695)
T ss_dssp -------HHSCCCCSSCEEECC---CEEEECCEEECTTSCEEECCCEEEEEC
T ss_pred -------CCCCccceeeeEEEeCCCEEEEEeCCccCcCccccccceEEEEEE
Confidence 00112677899998877 9999999 3446778899999864
No 24
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.97 E-value=1.8e-29 Score=286.33 Aligned_cols=248 Identities=22% Similarity=0.290 Sum_probs=190.9
Q ss_pred CCCC-CCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCC-CCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEE
Q 001895 86 EDGP-GPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATA-LEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWS 163 (999)
Q Consensus 86 ~~~P-~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~ 163 (999)
...| .+|.+|+++.+ +++||||||... ..+. ...++++|+||+.+++|+
T Consensus 49 ~~~p~~~R~~~~~~~~------------~~~lyv~GG~~~~~~~~-----------------~~~~~~v~~yd~~~~~W~ 99 (357)
T 2uvk_A 49 AAFPGGPRDQATSAFI------------DGNLYVFGGIGKNSEGL-----------------TQVFNDVHKYNPKTNSWV 99 (357)
T ss_dssp CCCTTCCCBSCEEEEE------------TTEEEEECCEEECTTSC-----------------EEECCCEEEEETTTTEEE
T ss_pred CCCCCCcCccceEEEE------------CCEEEEEcCCCCCCCcc-----------------ceeeccEEEEeCCCCcEE
Confidence 4577 79999999999 789999999822 1100 017899999999999999
Q ss_pred EecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCC---------------------------------CCcCcEEEEecCC
Q 001895 164 RITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAG---------------------------------LSAEDLHVLDLTQ 210 (999)
Q Consensus 164 ~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~---------------------------------~~~~dv~vyD~~t 210 (999)
++.++. |.+|.+|++++++++|||+||..... ...+++++||+.+
T Consensus 100 ~~~~~~--p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~ 177 (357)
T 2uvk_A 100 KLMSHA--PMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPST 177 (357)
T ss_dssp ECSCCC--SSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTT
T ss_pred ECCCCC--CcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCC
Confidence 999874 79999999999999999999975321 2458999999998
Q ss_pred CCCceEEEeecCCCCCCCc-ccEEEEECCcEEEEEccCCCC-CCCCeEEEEEC--CCCCceEEEcccCCCCCCCccceEE
Q 001895 211 QRPRWHRVVVQGPGPGPRY-GHVMALVGQRYLMAIGGNDGK-RPLADVWALDT--AAKPYEWRKLEPEGEGPPPCMYATA 286 (999)
Q Consensus 211 ~t~kW~~v~~~g~~P~~R~-~h~~~v~~~~~Lyv~GG~~g~-~~~ndv~~yDl--~s~~~~W~~v~~~~~~P~~r~~~~a 286 (999)
+ +|+.+. ++|.+|. +|+++++++ +||||||.++. ...+++|+||+ .++ +|+.+..+.. |.. +..++
T Consensus 178 ~--~W~~~~---~~p~~~~~~~~~~~~~~-~iyv~GG~~~~~~~~~~v~~~d~d~~~~--~W~~~~~~~~-~~~-~~~~~ 247 (357)
T 2uvk_A 178 Q--QWSYAG---ESPWYGTAGAAVVNKGD-KTWLINGEAKPGLRTDAVFELDFTGNNL--KWNKLAPVSS-PDG-VAGGF 247 (357)
T ss_dssp T--EEEEEE---ECSSCCCBSCEEEEETT-EEEEECCEEETTEECCCEEEEECC---C--EEEECCCSST-TTC-CBSCE
T ss_pred C--cEEECC---CCCCCCcccccEEEECC-EEEEEeeecCCCcccCceEEEEecCCCC--cEEecCCCCC-Ccc-cccce
Confidence 6 599997 7787655 599999987 89999998653 35789999987 777 9999987732 222 33445
Q ss_pred EEEeCCEEEEEeccCCC----------------CCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEc
Q 001895 287 SARSDGLLLLCGGRDAS----------------SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSG 350 (999)
Q Consensus 287 ~~~~~~~LyvfGG~~~~----------------~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~G 350 (999)
++..+++||||||.+.. ...+.+++.|+..++ +|..+.. .|.+|..|+++.++++|||+|
T Consensus 248 ~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~---~W~~~~~-~p~~r~~~~~~~~~~~i~v~G 323 (357)
T 2uvk_A 248 AGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNG---KWDKSGE-LSQGRAYGVSLPWNNSLLIIG 323 (357)
T ss_dssp EEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC------CEEEEE-CSSCCBSSEEEEETTEEEEEE
T ss_pred EEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCC---ceeeCCC-CCCCcccceeEEeCCEEEEEe
Confidence 56669999999997432 123578899998876 4555544 478999999999999999999
Q ss_pred CcCCCCCCcccCCeEEEEECCCCeEEEcccC
Q 001895 351 GALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (999)
Q Consensus 351 G~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~ 381 (999)
|.+..+. .++++++|++++++|.+....
T Consensus 324 G~~~~~~---~~~~v~~l~~~~~~~~~~~~~ 351 (357)
T 2uvk_A 324 GETAGGK---AVTDSVLITVKDNKVTVQNLE 351 (357)
T ss_dssp EECGGGC---EEEEEEEEEC-CCSCEEEC--
T ss_pred eeCCCCC---EeeeEEEEEEcCcEeEeeecc
Confidence 9876543 268999999999999998776
No 25
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=99.96 E-value=8.5e-31 Score=287.27 Aligned_cols=200 Identities=21% Similarity=0.340 Sum_probs=161.5
Q ss_pred CeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchh
Q 001895 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADIN 778 (999)
Q Consensus 699 ~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~ 778 (999)
+|+||||||||+.+|.++|+.+++++..+ .+||||||||||++++||+.+|++| |..+++||||||.+.++
T Consensus 2 ~i~vigDiHG~~~~l~~ll~~~~~~~~~d-----~~v~lGD~vdrG~~s~~~l~~l~~l----~~~~~~v~GNHe~~~l~ 72 (280)
T 2dfj_A 2 ATYLIGDVHGCYDELIALLHKVEFTPGKD-----TLWLTGDLVARGPGSLDVLRYVKSL----GDSVRLVLGNHDLHLLA 72 (280)
T ss_dssp CEEEECCCCSCHHHHHHHHHHTTCCTTTC-----EEEECSCCSSSSSCHHHHHHHHHHT----GGGEEECCCHHHHHHHH
T ss_pred eEEEEecCCCCHHHHHHHHHHhCCCCCCC-----EEEEeCCcCCCCCccHHHHHHHHhC----CCceEEEECCCcHHHHh
Confidence 68999999999999999999999843221 7999999999999999999999997 35899999999999999
Q ss_pred hhcCChHHHHHHhCCc--cchhhhhhhhhhhcccceeEEEcC-cEEEecCCccCcccCHHHhhhccCCccc---CCCCce
Q 001895 779 ALFGFRIECIERMGER--DGIWAWHRINRLFNWLPLAALIEK-KIICMHGGIGRSINHVEQIENLQRPITM---EAGSIV 852 (999)
Q Consensus 779 ~~~gf~~e~~~~~g~~--~~~~~~~~~~~~f~~LPlaa~i~~-~il~vHgGi~~~~~~~~~i~~i~rp~~~---~~~~~~ 852 (999)
..+||..+.. +..-. .....+..+.++|+.||+++.+++ +++||||||+|.+ ++++++.+.|+++. ......
T Consensus 73 ~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHaGi~p~~-~l~~~~~~~r~~e~~l~~~~~~~ 150 (280)
T 2dfj_A 73 VFAGISRNKP-KDRLTPLLEAPDADELLNWLRRQPLLQIDEEKKLVMAHAGITPQW-DLQTAKECARDVEAVLSSDSYPF 150 (280)
T ss_dssp HHTTSSCCCG-GGCCHHHHTSTTHHHHHHHHHTSCSEEEETTTTEEEESSCCCTTC-CHHHHHHHHHHHHHHHHSTTHHH
T ss_pred HhcCCcccch-hhhHHHHhhhhHHHHHHHHHHhCCcEEEECCCeEEEEeCCCCcCc-CHHHHHHHHHHHHHhhcCCcHHH
Confidence 9998864211 00000 001134556778888899988887 9999999999997 79999888887652 112235
Q ss_pred eeecccCCCCCCCCCCCCccCCCCCCceeeCHHH--HHHHHHHcC-CcEEEEec-cccccceEEec
Q 001895 853 LMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDR--VMEFCNNND-LQLIVRAH-ECVMDGFERFA 914 (999)
Q Consensus 853 ~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~--~~~fl~~~~-l~~iiR~H-~~~~~G~~~~~ 914 (999)
++|+||+||. ..|.++.||.+.+.||.++ ..+||+.+| +++++|+| |.+++||+.++
T Consensus 151 ~~~~l~~d~~-----~~w~~~~~G~~r~~~~~~~~tr~rf~~~~g~l~~~~r~~~~~~~~g~~~w~ 211 (280)
T 2dfj_A 151 FLDAMYGDMP-----NNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESPEEAPAPLKPWF 211 (280)
T ss_dssp HHHHTTCSCC-----CSCCTTCCHHHHHHHHHHHHHTCCEEETTBEEESSCCSCGGGCCSSCEEGG
T ss_pred HHHHhcCCCC-----CCcCCCCCCceeEEEeccHHHHHHHhhcCCcEeEEeccChhhcCccccchh
Confidence 7899999996 3699999999877899998 577999999 99999999 88999998765
No 26
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.95 E-value=5.3e-27 Score=288.45 Aligned_cols=275 Identities=15% Similarity=0.100 Sum_probs=203.2
Q ss_pred CCCCCCCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEecC
Q 001895 88 GPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITP 167 (999)
Q Consensus 88 ~P~pR~ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l~~ 167 (999)
.|.||.+|+++++.. +++||+|||....... + .....+++++||+.+++|+.+..
T Consensus 182 ~~~P~~~~~~av~~~----------~g~l~v~GG~~~~~~~----------~-----~~~~~~~~~~yd~~t~~w~~~~~ 236 (656)
T 1k3i_A 182 IDLPIVPAAAAIEPT----------SGRVLMWSSYRNDAFG----------G-----SPGGITLTSSWDPSTGIVSDRTV 236 (656)
T ss_dssp EECSSCCSEEEEETT----------TTEEEEEEECCCTTTC----------S-----CCCSEEEEEEECTTTCCBCCCEE
T ss_pred ccCCCCceeEEEEec----------CCEEEEEecccccccc----------c-----CCCCeEEEEEEeCCCCcEEeCcc
Confidence 356788888887732 5899999998653210 0 00134589999999999999877
Q ss_pred CCCCCCCCcCcE--EEE-eCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEE
Q 001895 168 FGEPPTPRAAHV--ATA-VGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAI 244 (999)
Q Consensus 168 ~g~~P~pR~~hs--a~~-~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~ 244 (999)
+ |.+|..|+ +++ .+++||++||... .++++||+.++ +|+.++ ++|.+|+.|+++++.+++|||+
T Consensus 237 ~---~~~~~~~~~~~~~~~~g~lyv~GG~~~-----~~v~~yd~~t~--~W~~~~---~~~~~R~~~s~~~~~dg~iyv~ 303 (656)
T 1k3i_A 237 T---VTKHDMFCPGISMDGNGQIVVTGGNDA-----KKTSLYDSSSD--SWIPGP---DMQVARGYQSSATMSDGRVFTI 303 (656)
T ss_dssp E---ECSCCCSSCEEEECTTSCEEEECSSST-----TCEEEEEGGGT--EEEECC---CCSSCCSSCEEEECTTSCEEEE
T ss_pred c---CCCCCCccccccCCCCCCEEEeCCCCC-----CceEEecCcCC--ceeECC---CCCccccccceEEecCCeEEEE
Confidence 6 55665553 444 4789999999753 37999999986 599987 8999999999999933489999
Q ss_pred cc-CCCCCCCCeEEEEECCCCCceEEEccc-----CCCC-----------------------------------------
Q 001895 245 GG-NDGKRPLADVWALDTAAKPYEWRKLEP-----EGEG----------------------------------------- 277 (999)
Q Consensus 245 GG-~~g~~~~ndv~~yDl~s~~~~W~~v~~-----~~~~----------------------------------------- 277 (999)
|| .++...++++++||+.++ +|+.+.. +...
T Consensus 304 GG~~~~~~~~~~~e~yd~~t~--~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w 381 (656)
T 1k3i_A 304 GGSWSGGVFEKNGEVYSPSSK--TWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGD 381 (656)
T ss_dssp CCCCCSSSCCCCEEEEETTTT--EEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCE
T ss_pred eCcccCCcccccceEeCCCCC--cceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcce
Confidence 99 567778999999999999 9999732 1110
Q ss_pred -------------CCCccceEEEE--EeCCEEEEEeccCCC--CCCcc---cEEEEecCCCCeEEEEECCCCCCCCccee
Q 001895 278 -------------PPPCMYATASA--RSDGLLLLCGGRDAS--SVPLA---SAYGLAKHRDGRWEWAIAPGVSPSPRYQH 337 (999)
Q Consensus 278 -------------P~~r~~~~a~~--~~~~~LyvfGG~~~~--~~~~~---d~~~~~~~~~~~W~w~~~~g~~P~~R~~h 337 (999)
++++..++++. ..+++||+|||.+.. ...++ .++.|++.++ +|..... +.+|.+|..|
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~-~W~~~~~-~~mp~~R~~~ 459 (656)
T 1k3i_A 382 VKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTS-PNTVFAS-NGLYFARTFH 459 (656)
T ss_dssp EEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSC-CEEEECT-TCCSSCCBSC
T ss_pred eecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCC-CeeEEcc-CCCCCCcccC
Confidence 11123444444 258999999997531 12334 5677777665 4544331 3458999999
Q ss_pred EEEEE-CCEEEEEcCcCCCCC--CcccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCCCccCCCCcceeEEEEE
Q 001895 338 AAVFV-NARLHVSGGALGGGR--MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAV 414 (999)
Q Consensus 338 sav~~-~~~L~V~GG~~~~~~--~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~ 414 (999)
+++++ +++|||+||.+.... .....+++++||+++++|+.+..+ +.+|.+|+++++
T Consensus 460 ~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~---------------------~~~R~~hs~a~l 518 (656)
T 1k3i_A 460 TSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPN---------------------SIVRVYHSISLL 518 (656)
T ss_dssp EEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCC---------------------SSCCCTTEEEEE
T ss_pred CeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCC---------------------CCccccccHhhc
Confidence 99888 999999999763210 113378899999999999998876 679999999888
Q ss_pred --CCEEEEEcCCC
Q 001895 415 --GDLIFIYGGLR 425 (999)
Q Consensus 415 --~~~LyV~GG~~ 425 (999)
+++|||+||..
T Consensus 519 l~dg~v~v~GG~~ 531 (656)
T 1k3i_A 519 LPDGRVFNGGGGL 531 (656)
T ss_dssp CTTSCEEEEECCC
T ss_pred CCCcEEEecCCCC
Confidence 99999999953
No 27
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.95 E-value=1.3e-26 Score=286.32 Aligned_cols=230 Identities=17% Similarity=0.235 Sum_probs=189.6
Q ss_pred CCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEe-e--cCCCCCCCcccEEEEE--CCcEEEEEc
Q 001895 171 PPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVV-V--QGPGPGPRYGHVMALV--GQRYLMAIG 245 (999)
Q Consensus 171 ~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~-~--~g~~P~~R~~h~~~v~--~~~~Lyv~G 245 (999)
.|.+|++|++ +++++|||+||.+. ...+++|+||+.++ +|+.++ . .+.+|.+|++|+++++ ++ +|||+|
T Consensus 385 ~p~rr~g~~~-~~~~~iyv~GG~~~--~~~~~v~~yd~~~~--~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~-~lyv~G 458 (695)
T 2zwa_A 385 PINRKFGDVD-VAGNDVFYMGGSNP--YRVNEILQLSIHYD--KIDMKNIEVSSSEVPVARMCHTFTTISRNN-QLLLIG 458 (695)
T ss_dssp TTCCBSCEEE-ECSSCEEEECCBSS--SBCCCEEEEEECSS--CEEEEECCCCCSCCCCCCBSCEEEEETTTT-EEEEEC
T ss_pred CCCCceeEEE-EECCEEEEECCCCC--CCcCcEEEEECCCC--eEEEeccCCCCCCCCccccceEEEEEccCC-EEEEEc
Confidence 4666666554 48999999999866 66799999999986 499998 3 3679999999999999 66 899999
Q ss_pred cCCCCC-CCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEE
Q 001895 246 GNDGKR-PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWA 324 (999)
Q Consensus 246 G~~g~~-~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~ 324 (999)
|.++.. .++++|+||+.++ +|+.+.++ |.+|..|+++++.+++||||||.+... +++.|++.++ +|.
T Consensus 459 G~~~~~~~~~dv~~yd~~t~--~W~~~~~~---p~~R~~h~~~~~~~~~iyv~GG~~~~~----~v~~yd~~t~---~W~ 526 (695)
T 2zwa_A 459 GRKAPHQGLSDNWIFDMKTR--EWSMIKSL---SHTRFRHSACSLPDGNVLILGGVTEGP----AMLLYNVTEE---IFK 526 (695)
T ss_dssp CBSSTTCBCCCCEEEETTTT--EEEECCCC---SBCCBSCEEEECTTSCEEEECCBCSSC----SEEEEETTTT---EEE
T ss_pred CCCCCCCccccEEEEeCCCC--cEEECCCC---CCCcccceEEEEcCCEEEEECCCCCCC----CEEEEECCCC---ceE
Confidence 998755 7999999999999 99999765 445777777766699999999997665 8999999887 555
Q ss_pred ECC--CCCCCCcceeEEEEEC---CEEEEEcCcCCCCCCcccCCeEEEEECCCCe------EEEcccCcCCCCCCCcccc
Q 001895 325 IAP--GVSPSPRYQHAAVFVN---ARLHVSGGALGGGRMVEDSSSVAVLDTAAGV------WCDTKSVVTSPRTGRYSAD 393 (999)
Q Consensus 325 ~~~--g~~P~~R~~hsav~~~---~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~------W~~v~~~~~~p~~~~~~~~ 393 (999)
... +..|.+|+.|++++++ ++|||+||....+. ...+++|+||+.+++ |+.+..++
T Consensus 527 ~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~--~~~~~v~~yd~~~~~w~~~~~W~~~~~~p----------- 593 (695)
T 2zwa_A 527 DVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQT--TVSDKAIIFKYDAENATEPITVIKKLQHP----------- 593 (695)
T ss_dssp ECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSS--CBCCEEEEEEECTTCSSCCEEEEEEEECG-----------
T ss_pred EccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCC--eeeCcEEEEEccCCccccceEEEEcCCCC-----------
Confidence 555 3468899999988877 89999999865442 237899999999999 88887641
Q ss_pred cCCCCCccCCCCcceeEEEEEC-CEEEEEcCCCCC---cCcCcEEEeeccc
Q 001895 394 AAGGDAAVELTRRCRHAAAAVG-DLIFIYGGLRGG---VLLDDLLVAEDLA 440 (999)
Q Consensus 394 ~~~~~~~~~p~~R~~hsa~~~~-~~LyV~GG~~~~---~~l~Dv~~ld~~~ 440 (999)
+.+|++|++++++ ++|||+||.++. ..+++++++|...
T Consensus 594 ---------~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t 635 (695)
T 2zwa_A 594 ---------LFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLS 635 (695)
T ss_dssp ---------GGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTT
T ss_pred ---------CCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCC
Confidence 3689999999999 999999998755 3689999999764
No 28
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=99.88 E-value=2e-23 Score=227.23 Aligned_cols=187 Identities=19% Similarity=0.307 Sum_probs=128.2
Q ss_pred HHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHhCCCCC-CCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCC
Q 001895 685 RIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPST-AGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPN 763 (999)
Q Consensus 685 ~~~~~e~~~l~~~~~i~vvGDiHG~~~~L~~il~~~g~~~~-~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~ 763 (999)
.+|.++++++++..+|+|||||||++.+|.++|+.++.... + .+||+|||||||++++|++.+|.++
T Consensus 6 ~~~~~~~~l~~~~~~i~visDiHg~~~~l~~~l~~~~~~~~~d------~ii~~GD~vd~g~~~~~~l~~l~~~------ 73 (262)
T 2qjc_A 6 QGYANVVTLPNVTGRVIIVGDIHGCRAQLEDLLRAVSFKQGSD------TLVAVGDLVNKGPDSFGVVRLLKRL------ 73 (262)
T ss_dssp --CCCEEECTTCCSCEEEECCCTTCHHHHHHHHHHHTCCTTTS------EEEECSCCSSSSSCHHHHHHHHHHH------
T ss_pred cccCChhhhcCCCCeEEEEeCCCCCHHHHHHHHHHHhccCCCC------EEEEecCCCCCCCCHHHHHHHHHHC------
Confidence 46788999999999999999999999999999999987653 3 7999999999999999999999875
Q ss_pred CEEEecCCccccchhhhcCChHH-HHHHhCCccc-----hhhhhhhhhhhcccceeEEEc-CcEEEecCCccCccc----
Q 001895 764 NVHLIRGNHEAADINALFGFRIE-CIERMGERDG-----IWAWHRINRLFNWLPLAALIE-KKIICMHGGIGRSIN---- 832 (999)
Q Consensus 764 ~v~llrGNHE~~~~~~~~gf~~e-~~~~~g~~~~-----~~~~~~~~~~f~~LPlaa~i~-~~il~vHgGi~~~~~---- 832 (999)
.+++|+||||.+.++..+++..+ +..+++.... ..+.....++|+.||+++.++ ++++|||||+.|.+.
T Consensus 74 ~~~~v~GNHd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lP~~~~i~~~~i~~vHgg~~p~~~~~~~ 153 (262)
T 2qjc_A 74 GAYSVLGNHDAKLLKLVKKLGKKECLKGRDAKSSLAPLAQSIPTDVETYLSQLPHIIRIPAHNVMVAHAGLHPQRPVDRQ 153 (262)
T ss_dssp TCEECCCHHHHHHHHHHHCC-------------CHHHHHHHCCHHHHHHHHTCCSEEEEGGGTEEEESSCCCTTSCGGGC
T ss_pred CCEEEeCcChHHHHhhhcCCCccccccccchHHHHHHHHhhhhHHHHHHHHcCCcEEEECCCcEEEEECCCCCCCCcccC
Confidence 59999999999999888887654 3444443211 223456678889999998886 599999999988653
Q ss_pred CHHHhhhcc---CCcccCCCCceeeecccCCCCCCCCCCCCccCCCCCCceeeCHHHH
Q 001895 833 HVEQIENLQ---RPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (999)
Q Consensus 833 ~~~~i~~i~---rp~~~~~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (999)
..+++..+. ++...+..+ ..++|+||... ....|..+.||...++||+..+
T Consensus 154 ~~~~l~~ir~~~~~~~~~~~G---~~~~~~d~~~~-~~~~w~~~~~g~~~vvfGHt~~ 207 (262)
T 2qjc_A 154 YEDEVTTMRNLIEKEQEATGG---VTLTATEETND-GGKPWASMWRGPETVVFGHDAR 207 (262)
T ss_dssp CHHHHHHCCEEEEC----------CCEEEESCSTT-CCEEGGGGCCCSSEEEECCCGG
T ss_pred CHHHHhhhhhcccccccCCCC---ccccccCCCCc-CCCChhhccCCCCEEEECCCcc
Confidence 233333332 221111112 14789999542 3455666666655445555443
No 29
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.87 E-value=8.6e-22 Score=242.10 Aligned_cols=247 Identities=13% Similarity=0.109 Sum_probs=179.5
Q ss_pred EEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCC-----CCcCcEEEEecCCCCCceEEEeecCCC
Q 001895 152 VHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAG-----LSAEDLHVLDLTQQRPRWHRVVVQGPG 224 (999)
Q Consensus 152 v~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~-----~~~~dv~vyD~~t~t~kW~~v~~~g~~ 224 (999)
+..||+.+++|..+.++ ||..|+++++ +++||++||..... ....++++||+.++ +|+.+. .+
T Consensus 168 ~~~~dp~~~~W~~~~~~-----P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~--~w~~~~---~~ 237 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDL-----PIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTG--IVSDRT---VT 237 (656)
T ss_dssp CCCCCTTSCEEEEEEEC-----SSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTC--CBCCCE---EE
T ss_pred cccCCCCCCeeeeeccC-----CCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCC--cEEeCc---cc
Confidence 45578889999998654 5567777777 88999999975432 12357999999996 499887 56
Q ss_pred CCCCcccE--EEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCC
Q 001895 225 PGPRYGHV--MALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (999)
Q Consensus 225 P~~R~~h~--~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~ 302 (999)
|.+|..|+ ++++.+++||++||.++. ++++||+.++ +|+.+.++. .+|.+|+++++.+++||++||...
T Consensus 238 ~~~~~~~~~~~~~~~~g~lyv~GG~~~~----~v~~yd~~t~--~W~~~~~~~---~~R~~~s~~~~~dg~iyv~GG~~~ 308 (656)
T 1k3i_A 238 VTKHDMFCPGISMDGNGQIVVTGGNDAK----KTSLYDSSSD--SWIPGPDMQ---VARGYQSSATMSDGRVFTIGGSWS 308 (656)
T ss_dssp ECSCCCSSCEEEECTTSCEEEECSSSTT----CEEEEEGGGT--EEEECCCCS---SCCSSCEEEECTTSCEEEECCCCC
T ss_pred CCCCCCccccccCCCCCCEEEeCCCCCC----ceEEecCcCC--ceeECCCCC---ccccccceEEecCCeEEEEeCccc
Confidence 67776554 555555589999998653 7999999999 999997654 446666666666999999999644
Q ss_pred CCCCcccEEEEecCCCCeEEEEEC---CCCC-------------------------------------------------
Q 001895 303 SSVPLASAYGLAKHRDGRWEWAIA---PGVS------------------------------------------------- 330 (999)
Q Consensus 303 ~~~~~~d~~~~~~~~~~~W~w~~~---~g~~------------------------------------------------- 330 (999)
....+++++.|++.++ +|+.... .++.
T Consensus 309 ~~~~~~~~e~yd~~t~-~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~ 387 (656)
T 1k3i_A 309 GGVFEKNGEVYSPSSK-TWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGK 387 (656)
T ss_dssp SSSCCCCEEEEETTTT-EEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEE
T ss_pred CCcccccceEeCCCCC-cceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCc
Confidence 4446889999999876 5544311 1110
Q ss_pred -------CCCcceeEEEE---ECCEEEEEcCcCCCCCCcccCC---eEEEEECCCCeEEEcc--cCcCCCCCCCcccccC
Q 001895 331 -------PSPRYQHAAVF---VNARLHVSGGALGGGRMVEDSS---SVAVLDTAAGVWCDTK--SVVTSPRTGRYSADAA 395 (999)
Q Consensus 331 -------P~~R~~hsav~---~~~~L~V~GG~~~~~~~~~~~~---~v~vyD~~t~~W~~v~--~~~~~p~~~~~~~~~~ 395 (999)
+.++..+++++ ++++|||+||...... ...++ .+++||+.+++|..+. .+
T Consensus 388 ~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~-~~~~~~~~~v~~yd~~~~~W~~~~~~~m-------------- 452 (656)
T 1k3i_A 388 RQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQD-SDATTNAHIITLGEPGTSPNTVFASNGL-------------- 452 (656)
T ss_dssp CEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSS-SBCCCCEEEEECCSTTSCCEEEECTTCC--------------
T ss_pred cccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCC-CCcCCcceEEEcCCCCCCCeeEEccCCC--------------
Confidence 01123345554 4899999999753211 11234 7999999999999986 44
Q ss_pred CCCCccCCCCcceeEEEEE-CCEEEEEcCCCC------CcCcCcEEEeeccc
Q 001895 396 GGDAAVELTRRCRHAAAAV-GDLIFIYGGLRG------GVLLDDLLVAEDLA 440 (999)
Q Consensus 396 ~~~~~~~p~~R~~hsa~~~-~~~LyV~GG~~~------~~~l~Dv~~ld~~~ 440 (999)
|.+|..|+++++ +++|||+||.+. ...+++++++|...
T Consensus 453 -------p~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t 497 (656)
T 1k3i_A 453 -------YFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQ 497 (656)
T ss_dssp -------SSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGG
T ss_pred -------CCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCC
Confidence 679999999998 999999999653 35678899998643
No 30
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=99.76 E-value=4.6e-20 Score=195.58 Aligned_cols=122 Identities=27% Similarity=0.324 Sum_probs=93.4
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccch
Q 001895 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (999)
.+|+|||||||++.+|.++|+.++..+..+ .+||+|||||||+++.|++.+|.. ..+++|+||||.+.+
T Consensus 13 ~~i~visDiHg~~~~l~~~l~~~~~~~~~d-----~~i~~GD~~~~g~~~~~~~~~l~~------~~~~~v~GNhd~~~~ 81 (221)
T 1g5b_A 13 RNIWVVGDLHGCYTNLMNKLDTIGFDNKKD-----LLISVGDLVDRGAENVECLELITF------PWFRAVRGNHEQMMI 81 (221)
T ss_dssp SCEEEECCCTTCHHHHHHHHHHHTCCTTTC-----EEEECSCCSSSSSCHHHHHGGGGS------TTEEECCCHHHHHHH
T ss_pred ceEEEEEcCCCCHHHHHHHHHHccCCCCCC-----EEEEeCCccCCCCChHHHHHHHhc------CCEEEEccCcHHHHH
Confidence 579999999999999999999998753221 789999999999999999988754 379999999999887
Q ss_pred hhhcCChHH-HHHHhCCc-------cchhhhhhhhhhhcccceeEEE---cCcEEEecCCccCc
Q 001895 778 NALFGFRIE-CIERMGER-------DGIWAWHRINRLFNWLPLAALI---EKKIICMHGGIGRS 830 (999)
Q Consensus 778 ~~~~gf~~e-~~~~~g~~-------~~~~~~~~~~~~f~~LPlaa~i---~~~il~vHgGi~~~ 830 (999)
+..+++... .+...+.. ....+++.+.++|+.||+++++ +.+++|||||+++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lP~~~~~~~~~~~i~~vHgg~~~~ 145 (221)
T 1g5b_A 82 DGLSERGNVNHWLLNGGGWFFNLDYDKEILAKALAHKADELPLIIELVSKDKKYVICHADYPFD 145 (221)
T ss_dssp HHHSTTCCCHHHHTTTGGGGGGSCHHHHHHHHHHHHHHTTCCSEEEEEETTEEEEECSSCCCSS
T ss_pred hhhccCCcHHHHHHcCCCchhhcCHHHHHHHHHHHHHHHhCCcEEEEEecCCeEEEEecCCChh
Confidence 755433211 12222211 1123557888999999999877 56899999999764
No 31
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=99.43 E-value=5.5e-13 Score=143.37 Aligned_cols=189 Identities=19% Similarity=0.157 Sum_probs=126.3
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccch
Q 001895 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (999)
.+|.+||||||++.+|.++++.+. ..+ .+|++||++|+|+++.|++.+|..++ .+++++||||....
T Consensus 4 mri~~isDiHg~~~~l~~~l~~~~--~~d------~ii~~GDl~~~g~~~~~~~~~l~~~~-----~~~~v~GNhD~~~~ 70 (246)
T 3rqz_A 4 MRILIISDVHANLVALEAVLSDAG--RVD------DIWSLGDIVGYGPRPRECVELVRVLA-----PNISVIGNHDWACI 70 (246)
T ss_dssp CCEEEECCCTTCHHHHHHHHHHHC--SCS------EEEECSCCSSSSSCHHHHHHHHHHHC-----SSEECCCHHHHHHT
T ss_pred cEEEEEeecCCCHHHHHHHHHhcc--CCC------EEEECCCcCCCCCCHHHHHHHHHhcC-----CCEEEeCchHHHHh
Confidence 579999999999999999999987 222 79999999999999999999999884 37999999999876
Q ss_pred hhhcC--Ch---HHHHHHhCCccchhhhhhhhhhhcccceeEEEcCcEEEecCCccCcccCHHHhhhccCCcccCCCCce
Q 001895 778 NALFG--FR---IECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIV 852 (999)
Q Consensus 778 ~~~~g--f~---~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~ 852 (999)
..... +. .+... + ....+.....+++..||.....+ +++|+||++....
T Consensus 71 ~~~~~~~~~~~~~~~~~-~---~~~~l~~~~~~~L~~lp~~~~~~-~i~~~Hg~p~~~~--------------------- 124 (246)
T 3rqz_A 71 GRLSLDEFNPVARFASY-W---TTMQLQAEHLQYLESLPNRMIDG-DWTVVHGSPRHPI--------------------- 124 (246)
T ss_dssp CCCCCC--CGGGGCHHH-H---HHHHCCHHHHHHHHHCCSEEEET-TEEEESSCSSSTT---------------------
T ss_pred ccCCccccCHHHHHHHH-H---HHHHcCHHHHHHHHhCCcEEEEC-CEEEEECCcCCcc---------------------
Confidence 54322 10 00000 0 01123355667888999886654 8999999864210
Q ss_pred eeecccCCCCCCCCCCCCccCCCCCCceeeCHHHHHHHHHHcCCcEEEEeccccccceEE--------------------
Q 001895 853 LMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFER-------------------- 912 (999)
Q Consensus 853 ~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~-------------------- 912 (999)
| . +.+....+.+.++..+.+++|-||.=.+.-+..
T Consensus 125 -----~----~----------------~~~~~~~~~~~l~~~~~~l~i~GHtH~p~~~~~~~~~~~~~~~~~~~~~~~~l 179 (246)
T 3rqz_A 125 -----W----E----------------YIYNARIAALNFPAFDTPLCFVGHTHVPLYIREDEALSNVAPHHPNDGEVLDV 179 (246)
T ss_dssp -----T----C----------------CCCSHHHHHHHGGGCCSSEEECCSSSSEEEEEHHHHHTTCCCBCCCTTCEEEC
T ss_pred -----c----c----------------ccCChHHHHHHHhccCCCEEEECCcCcccEEEecccccccccccccccceeec
Confidence 0 0 122345667778888999999999876543331
Q ss_pred ecCCeEEEEecccccCCCCCCeEEEEEEcCC-ceEEeEEe
Q 001895 913 FAQGHLITLFSATNYCGTANNAGAILVLGRD-LVVVPKLI 951 (999)
Q Consensus 913 ~~~~~~iTvFSa~~y~~~~~n~ga~l~~~~~-~~~~~~~~ 951 (999)
..+..+|..=|.-.-- .....+++++++.+ ..++++.+
T Consensus 180 ~~g~~ivNpGSVG~Pr-dg~p~A~Y~i~d~~~~~v~~~rv 218 (246)
T 3rqz_A 180 SSGRYIINPGAVGQPR-DGDPRASYAIFEPDAQRVTFHRV 218 (246)
T ss_dssp SSSCEEEEECCSSCCC-SSCCSEEEEEEEGGGTEEEEEEE
T ss_pred CCCeEEEECCccCCCC-CcCCcceEEEEECCCCEEEEEEe
Confidence 1134455555442211 23456888888754 34555444
No 32
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=99.38 E-value=5.5e-12 Score=135.72 Aligned_cols=199 Identities=12% Similarity=0.048 Sum_probs=121.9
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhC---CC--CCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCc
Q 001895 698 APIKIFGDLHGQFGDLMRLFDEYG---SP--STAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNH 772 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~il~~~g---~~--~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNH 772 (999)
.+|++||||||++..|.++++.+. .. ..+ .+|++||++|+|+++.|++.+|..|+... .+++++|||
T Consensus 2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d------~ii~~GD~~~~g~~~~~~~~~l~~l~~~~--~~~~v~GNh 73 (252)
T 1nnw_A 2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIE------KYYILGNIVGLFPYPKEVIEVIKDLTKKE--NVKIIRGKY 73 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEE------EEEEESCSSSSSSCHHHHHHHHHHHHHHS--CEEEECCHH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCC------EEEEeCccCCCCCCHHHHHHHHHhhHhhc--CeeEEecch
Confidence 468999999999999999998775 32 112 68999999999999999999999987543 499999999
Q ss_pred cccchhhhcCCh-----------HHHHHHhCCccchhhhhhhhhhhcccceeEEE--cC-cEEEecCCccCcccCHHHhh
Q 001895 773 EAADINALFGFR-----------IECIERMGERDGIWAWHRINRLFNWLPLAALI--EK-KIICMHGGIGRSINHVEQIE 838 (999)
Q Consensus 773 E~~~~~~~~gf~-----------~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i--~~-~il~vHgGi~~~~~~~~~i~ 838 (999)
|.........+. ......+ ......+-....++++.||....+ ++ +|+++||++....
T Consensus 74 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~L~~lp~~~~~~~~~~~i~~~H~~p~~~~------- 145 (252)
T 1nnw_A 74 DQIIAMSDPHATDPGYIDKLELPGHVKKAL-KFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSPINPF------- 145 (252)
T ss_dssp HHHHHHSCTTCSSSGGGGGSSCCHHHHHHH-HHHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEESSCSSCTT-------
T ss_pred HHHhhccccccCCcccccchhhhHHHHHHH-HHHHHHCCHHHHHHHHhCCceEEEeeCCcEEEEEcCCCCCCc-------
Confidence 987654321110 0000000 000112234455778889987654 33 8999999862110
Q ss_pred hccCCcccCCCCceeeecccCCCCCCCCCCCCccCCCCCCceeeCHHHHHHHHHHc-CCcEEEEeccccccceEEecCCe
Q 001895 839 NLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNN-DLQLIVRAHECVMDGFERFAQGH 917 (999)
Q Consensus 839 ~i~rp~~~~~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~-~l~~iiR~H~~~~~G~~~~~~~~ 917 (999)
. +.+|. .-+.+.+.++++.. +.+++|-||.-....... ++.
T Consensus 146 ----------~-----~~~~~---------------------~~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~~--~~~ 187 (252)
T 1nnw_A 146 ----------D-----GEVLA---------------------EQPTSYYEAIMRPVKDYEMLIVASPMYPVDAMT--RYG 187 (252)
T ss_dssp ----------T-----CCCCS---------------------SCCHHHHHHHHGGGTTSSEEEESTTCSEEEEEE--TTE
T ss_pred ----------c-----cccCC---------------------CCCHHHHHHHHhcCCCCCEEEECCccccceEec--CCe
Confidence 0 00010 01235677788887 999999999887654432 443
Q ss_pred E-EEEecccccCCCCCCeEEEEEEcCC-ceEEeEEe
Q 001895 918 L-ITLFSATNYCGTANNAGAILVLGRD-LVVVPKLI 951 (999)
Q Consensus 918 ~-iTvFSa~~y~~~~~n~ga~l~~~~~-~~~~~~~~ 951 (999)
+ |..=| ..+.-.....+++++++-+ ..+.++.+
T Consensus 188 ~~in~Gs-~~~~~~~~~~~~y~il~~~~~~v~~~~v 222 (252)
T 1nnw_A 188 RVVCPGS-VGFPPGKEHKATFALVDVDTLKPKFIEV 222 (252)
T ss_dssp EEEEECC-SSSCSSSSCCEEEEEEETTTCCEEEEEE
T ss_pred EEEECCC-ccCCCCCCCcceEEEEECCCCeEEEEEe
Confidence 3 22211 1111111225677777543 55555444
No 33
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=99.25 E-value=4.4e-12 Score=138.23 Aligned_cols=118 Identities=16% Similarity=0.086 Sum_probs=86.8
Q ss_pred CeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccchh
Q 001895 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADIN 778 (999)
Q Consensus 699 ~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~ 778 (999)
+|.||+||||++..|.++|+.+.....+ .+||+||+|++|+++.||+.+|.+++ .+++++||||...++
T Consensus 13 ~i~~iSDiHg~~~~l~~vl~~~~~~~~D------~ii~~GDlv~~g~~~~~~~~~l~~~~-----~~~~v~GNhD~~~~~ 81 (270)
T 3qfm_A 13 KIALLSDIHGNTTALEAVLADARQLGVD------EYWLLGDILMPGTGRRRILDLLDQLP-----ITARVLGNWEDSLWH 81 (270)
T ss_dssp EEEEECCCTTCHHHHHHHHHHHHHTTCC------EEEECSCCSSSSSCSHHHHHHHHTSC-----EEEECCCHHHHHHHH
T ss_pred EEEEEecCCCCHHHHHHHHHHHHhcCCC------EEEEcCCCCCCCCCHHHHHHHHHccC-----CEEEEcCChHHHHHH
Confidence 5899999999999999999988644333 79999999999999999999998873 589999999998776
Q ss_pred hhc---CChHHHHHHhC---CccchhhhhhhhhhhcccceeEEE--c-CcEEEecCCc
Q 001895 779 ALF---GFRIECIERMG---ERDGIWAWHRINRLFNWLPLAALI--E-KKIICMHGGI 827 (999)
Q Consensus 779 ~~~---gf~~e~~~~~g---~~~~~~~~~~~~~~f~~LPlaa~i--~-~~il~vHgGi 827 (999)
... +|.......+. ......+.....+++..||....+ + .+|+++||-.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~L~~LP~~~~~~~~g~~i~lvHg~p 139 (270)
T 3qfm_A 82 GVRKELDSTRPSQRYLLRQCQYVLEEISLEEIEVLHNQPLQIHRQFGDLTVGISHHLP 139 (270)
T ss_dssp HHTTCSCTTSHHHHHHHHHHHHHHTTSCHHHHHHHHSCCSEEEEEETTEEEEEESSBT
T ss_pred hhccccCCCcHHHHHHHHHHHHHHHHcCHHHHHHHHhCCCceEEEECCcEEEEEECCC
Confidence 433 33322111110 001123445677889999998755 3 3899999654
No 34
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=98.66 E-value=3.5e-08 Score=103.07 Aligned_cols=69 Identities=19% Similarity=0.374 Sum_probs=56.7
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCC--------ChHHHHHHHHHhhhcCCCCEEEec
Q 001895 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQ--------HSLETITLLLALKVEYPNNVHLIR 769 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~--------~s~evl~ll~~lk~~~P~~v~llr 769 (999)
.++.+++|+||++..|.++++.+.....+ .+|++||++|+|+ ...+++.+|.+++ ..+++++
T Consensus 26 mki~~iSD~H~~~~~l~~~l~~~~~~~~d------~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~~----~~v~~V~ 95 (208)
T 1su1_A 26 MKLMFASDIHGSLPATERVLELFAQSGAQ------WLVILGDVLNHGPRNALPEGYAPAKVVERLNEVA----HKVIAVR 95 (208)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHHTCS------EEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTG----GGEEECC
T ss_pred EEEEEEEcCCCCHHHHHHHHHHHHhcCCC------EEEECCCccccCcccccccccCHHHHHHHHHhcC----CceEEEE
Confidence 57999999999999999999876422222 7899999999998 4689999988875 3699999
Q ss_pred CCccccc
Q 001895 770 GNHEAAD 776 (999)
Q Consensus 770 GNHE~~~ 776 (999)
||||...
T Consensus 96 GNHD~~~ 102 (208)
T 1su1_A 96 GNCDSEV 102 (208)
T ss_dssp CTTCCHH
T ss_pred CCCchHH
Confidence 9999854
No 35
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=98.60 E-value=7.4e-07 Score=91.58 Aligned_cols=65 Identities=18% Similarity=0.323 Sum_probs=50.6
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccch
Q 001895 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (999)
.++.+++|+||++..|.++++.+.....+ .+|++||++|. +++..|.++ ...+++++||||....
T Consensus 26 m~i~~iSD~Hg~~~~l~~~l~~~~~~~~D------~ii~~GDl~~~-----~~~~~l~~l----~~~~~~V~GNhD~~~~ 90 (190)
T 1s3l_A 26 MKIGIMSDTHDHLPNIRKAIEIFNDENVE------TVIHCGDFVSL-----FVIKEFENL----NANIIATYGNNDGERC 90 (190)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHSCCS------EEEECSCCCST-----HHHHHGGGC----SSEEEEECCTTCCCHH
T ss_pred eEEEEEeeCCCCHHHHHHHHHHHhhcCCC------EEEECCCCCCH-----HHHHHHHhc----CCCEEEEeCCCcchHH
Confidence 47999999999999999999887432222 68899999984 666666543 2469999999998654
No 36
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=98.58 E-value=8.3e-07 Score=92.90 Aligned_cols=73 Identities=11% Similarity=0.127 Sum_probs=54.3
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccccch
Q 001895 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (999)
.+|.+++|+|+.+..|.++++.+.....+ -+|++||++|+|....++..++-.|+.. +..+++++||||....
T Consensus 6 mri~~iSD~H~~~~~~~~~~~~~~~~~~D------~vi~~GDl~~~~~~~~~~~~~~~~l~~~-~~pv~~v~GNHD~~~~ 78 (228)
T 1uf3_A 6 RYILATSNPMGDLEALEKFVKLAPDTGAD------AIALIGNLMPKAAKSRDYAAFFRILSEA-HLPTAYVPGPQDAPIW 78 (228)
T ss_dssp CEEEEEECCTTCHHHHHHHHTHHHHHTCS------EEEEESCSSCTTCCHHHHHHHHHHHGGG-CSCEEEECCTTSCSHH
T ss_pred EEEEEEeeccCCHHHHHHHHHHHhhcCCC------EEEECCCCCCCCCCHHHHHHHHHHHHhc-CCcEEEECCCCCchhH
Confidence 57999999999999998888765321122 6889999999997666555555555433 3459999999998643
No 37
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=98.33 E-value=2.9e-07 Score=93.60 Aligned_cols=62 Identities=23% Similarity=0.258 Sum_probs=48.8
Q ss_pred CCeEEEecCCC--CHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCcccc
Q 001895 698 APIKIFGDLHG--QFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAA 775 (999)
Q Consensus 698 ~~i~vvGDiHG--~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~ 775 (999)
.+|.+++|+|| +...|.++++.+. ...+ .+|++||++|+ |++.+|..+. ..+++++||||..
T Consensus 23 mri~~iSD~Hg~~~~~~l~~~l~~~~-~~~D------~ii~~GD~~~~-----~~~~~l~~~~----~~v~~V~GNhD~~ 86 (178)
T 2kkn_A 23 KRFLLISDSHVPVRMASLPDEILNSL-KEYD------GVIGLGDYVDL-----DTVILLEKFS----KEFYGVHGNMDYP 86 (178)
T ss_dssp EEEEEECCCCBTTTTCCCCHHHHHGG-GGCS------EEEESSCBSCH-----HHHHHHHHHT----SSEEECCCSSSCG
T ss_pred eEEEEEecccCCCCHHHHHHHHHHHh-cCCC------EEEECCCCCCH-----HHHHHHHhcC----CCEEEEECCCCcH
Confidence 36899999997 7778888887753 2222 68999999984 8888888763 3699999999975
No 38
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=98.30 E-value=4.1e-06 Score=84.73 Aligned_cols=58 Identities=19% Similarity=0.235 Sum_probs=43.2
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCcccc
Q 001895 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAA 775 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~ 775 (999)
.++.+++|+||++..|.++++.+.. ..+ .++++||+.- +++. .++ ..+++++||||..
T Consensus 7 m~i~~isD~H~~~~~~~~~~~~~~~-~~d------~i~~~GD~~~------~~l~---~l~----~~~~~v~GNhD~~ 64 (176)
T 3ck2_A 7 QTIIVMSDSHGDSLIVEEVRDRYVG-KVD------AVFHNGDSEL------RPDS---PLW----EGIRVVKGNMDFY 64 (176)
T ss_dssp EEEEEECCCTTCHHHHHHHHHHHTT-TSS------EEEECSCCCS------CTTC---GGG----TTEEECCCTTCCS
T ss_pred cEEEEEecCCCCHHHHHHHHHHhhc-CCC------EEEECCCCch------HHHH---hhh----CCeEEecCcccch
Confidence 4689999999999999999998853 222 6889999731 2222 222 2699999999975
No 39
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=98.27 E-value=2.4e-05 Score=81.78 Aligned_cols=120 Identities=22% Similarity=0.342 Sum_probs=79.1
Q ss_pred cCCeEEEecCCCCHH------HHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecC
Q 001895 697 KAPIKIFGDLHGQFG------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRG 770 (999)
Q Consensus 697 ~~~i~vvGDiHG~~~------~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrG 770 (999)
..++.+++|+|+++. .|.++++. ...+ .+|++||++| .|++.+|..+. ..+++++|
T Consensus 25 ~m~i~~iSD~H~~~~~~~l~~~l~~~~~~---~~~D------~vi~~GDl~~-----~~~l~~l~~~~----~~v~~V~G 86 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAKELPSNFRELLAT---DKIN------YVLCTGNVCS-----QEYVEMLKNIT----KNVYIVSG 86 (215)
T ss_dssp CEEEEEECCCCTTTTCSSCCGGGHHHHHC---TTCC------EEEECSCCCC-----HHHHHHHHHHC----SCEEECCC
T ss_pred CcEEEEEecCCCCCChHHHHHHHHHHHhc---CCCC------EEEECCCCCC-----HHHHHHHHHcC----CCEEEecC
Confidence 357999999999863 33334331 1122 6889999998 58888887763 36999999
Q ss_pred CccccchhhhcCChHHHHHHhCCccchhhhhhhhhhhcccceeEEE--c-CcEEEecCCccCcccCHHHhhhccCCcccC
Q 001895 771 NHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALI--E-KKIICMHGGIGRSINHVEQIENLQRPITME 847 (999)
Q Consensus 771 NHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i--~-~~il~vHgGi~~~~~~~~~i~~i~rp~~~~ 847 (999)
|||....... .+++..||....+ + .+|+++||.... |
T Consensus 87 NHD~~~~~~~-----------------------~~~~~~lp~~~~~~~~~~~i~l~Hg~~~~-------------~---- 126 (215)
T 2a22_A 87 DLDSAIFNPD-----------------------PESNGVFPEYVVVQIGEFKIGLMHGNQVL-------------P---- 126 (215)
T ss_dssp TTCCSCCBCC-----------------------GGGTBCCCSEEEEEETTEEEEEECSTTSS-------------S----
T ss_pred CCcCcccccC-----------------------hhhHhhCCceEEEecCCeEEEEEcCCccC-------------C----
Confidence 9998654310 0123456654333 2 379999986411 0
Q ss_pred CCCceeeecccCCCCCCCCCCCCccCCCCCCceeeCHHHHHHHHHHcCCcEEEEeccccc
Q 001895 848 AGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVM 907 (999)
Q Consensus 848 ~~~~~~~dllWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~ 907 (999)
| .+.+.+.++++..+.++++-||.-..
T Consensus 127 ----------~-----------------------~~~~~l~~~~~~~~~d~vl~GHtH~~ 153 (215)
T 2a22_A 127 ----------W-----------------------DDPGSLEQWQRRLDCDILVTGHTHKL 153 (215)
T ss_dssp ----------T-----------------------TCHHHHHHHHHHHTCSEEEECSSCCC
T ss_pred ----------C-----------------------CCHHHHHHHHhhcCCCEEEECCcCCC
Confidence 0 13456777888889999999997654
No 40
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=97.95 E-value=5.8e-05 Score=83.55 Aligned_cols=71 Identities=18% Similarity=0.280 Sum_probs=47.0
Q ss_pred CCeEEEecCCC------------CHHHHHHHHHHhCC--CCCCCCccceeEEEeccccCCCCCh-HH-HHHHHHHhhhcC
Q 001895 698 APIKIFGDLHG------------QFGDLMRLFDEYGS--PSTAGDIAYIDYLFLGDYVDRGQHS-LE-TITLLLALKVEY 761 (999)
Q Consensus 698 ~~i~vvGDiHG------------~~~~L~~il~~~g~--~~~~~~~~~~~~vfLGDyVDRG~~s-~e-vl~ll~~lk~~~ 761 (999)
.+|++++|+|. ....|.++++.+.. ...+ -+|++||++|.|... .+ +..+|-.|....
T Consensus 26 ~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d------~vi~~GDl~~~~~~~~~~~~~~~l~~l~~~~ 99 (330)
T 3ib7_A 26 YVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPD------AIVFTGDLADKGEPAAYRKLRGLVEPFAAQL 99 (330)
T ss_dssp EEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCS------EEEECSCCBTTCCHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCC------EEEECCCCCCCCCHHHHHHHHHHHHHHHhhc
Confidence 46999999996 26677777776642 2222 588899999998742 22 233333332222
Q ss_pred CCCEEEecCCccc
Q 001895 762 PNNVHLIRGNHEA 774 (999)
Q Consensus 762 P~~v~llrGNHE~ 774 (999)
.-.+++++||||.
T Consensus 100 ~~pv~~v~GNHD~ 112 (330)
T 3ib7_A 100 GAELVWVMGNHDD 112 (330)
T ss_dssp TCEEEECCCTTSC
T ss_pred CCCEEEeCCCCCC
Confidence 3459999999997
No 41
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=97.95 E-value=1.1e-05 Score=82.82 Aligned_cols=69 Identities=19% Similarity=0.246 Sum_probs=48.3
Q ss_pred CCeEEEecCCCCHHHH-------------HHHHHHhCC--CCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCC
Q 001895 698 APIKIFGDLHGQFGDL-------------MRLFDEYGS--PSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYP 762 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~L-------------~~il~~~g~--~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P 762 (999)
.++.+++|+|+....+ .++++.+.. ...+ .+|++||++++|+...+++.+|..+.
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D------~vi~~GDl~~~~~~~~~~~~~l~~l~---- 71 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPED------TLYHLGDFTWHFNDKNEYLRIWKALP---- 71 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTC------EEEECSCCBSCSCCTTSHHHHHHHSS----
T ss_pred cEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCC------EEEECCCCCCCchhHHHHHHHHHHCC----
Confidence 4689999999644332 223333221 1222 68899999999987778888887763
Q ss_pred CCEEEecCCccccc
Q 001895 763 NNVHLIRGNHEAAD 776 (999)
Q Consensus 763 ~~v~llrGNHE~~~ 776 (999)
..+++++||||...
T Consensus 72 ~~~~~v~GNhD~~~ 85 (195)
T 1xm7_A 72 GRKILVMGNHDKDK 85 (195)
T ss_dssp SEEEEECCTTCCCH
T ss_pred CCEEEEeCCCCCch
Confidence 35999999999854
No 42
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=97.93 E-value=1.3e-05 Score=82.23 Aligned_cols=64 Identities=23% Similarity=0.366 Sum_probs=43.9
Q ss_pred CCeEEEecCCCCHH--HHHHHHHH-hCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCccc
Q 001895 698 APIKIFGDLHGQFG--DLMRLFDE-YGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEA 774 (999)
Q Consensus 698 ~~i~vvGDiHG~~~--~L~~il~~-~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~ 774 (999)
.++.+++|+|++.. ++.+.|.. +.....+ .+|++||++| .+++.+|..+. ..+++++||||.
T Consensus 11 m~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d------~ii~~GDl~~-----~~~~~~l~~~~----~~~~~v~GNhD~ 75 (192)
T 1z2w_A 11 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQ------HILCTGNLCT-----KESYDYLKTLA----GDVHIVRGDFDE 75 (192)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCS------EEEECSCCBS-----HHHHHHHHHHC----SEEEECCCTTCC
T ss_pred eEEEEEecCCCCccchhHHHHHHHHhccCCCC------EEEEcCCCCC-----HHHHHHHHhcC----CCEEEEcCCcCc
Confidence 56899999999753 23333332 2211122 6888999997 68888877663 369999999997
Q ss_pred cc
Q 001895 775 AD 776 (999)
Q Consensus 775 ~~ 776 (999)
..
T Consensus 76 ~~ 77 (192)
T 1z2w_A 76 NL 77 (192)
T ss_dssp CT
T ss_pred cc
Confidence 54
No 43
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=97.88 E-value=6.6e-06 Score=88.14 Aligned_cols=73 Identities=8% Similarity=0.096 Sum_probs=52.0
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCCh--------------------------HHHH
Q 001895 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS--------------------------LETI 751 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s--------------------------~evl 751 (999)
.+|.+++|||+++..|.++++.+.....+ -+|++||++|+|..+ .+..
T Consensus 6 mri~~iSDlH~~~~~~~~~l~~~~~~~~D------~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 79 (260)
T 2yvt_A 6 RKVLAIKNFKERFDLLPKLKGVIAEKQPD------ILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLD 79 (260)
T ss_dssp CEEEEEECCTTCGGGHHHHHHHHHHHCCS------EEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred EEEEEEeecCCChHHHHHHHHHHHhcCCC------EEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHH
Confidence 57999999999999998888876322222 688999999999652 1233
Q ss_pred HHHHHhhhcCCCCEEEecCCccccch
Q 001895 752 TLLLALKVEYPNNVHLIRGNHEAADI 777 (999)
Q Consensus 752 ~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (999)
.+|-.|+. .+..+++++||||....
T Consensus 80 ~~l~~l~~-~~~pv~~v~GNHD~~~~ 104 (260)
T 2yvt_A 80 KFFREIGE-LGVKTFVVPGKNDAPLK 104 (260)
T ss_dssp HHHHHHHT-TCSEEEEECCTTSCCHH
T ss_pred HHHHHHHh-cCCcEEEEcCCCCchhh
Confidence 44444443 23469999999998643
No 44
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=97.27 E-value=0.0051 Score=67.04 Aligned_cols=63 Identities=24% Similarity=0.263 Sum_probs=43.1
Q ss_pred CCeEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCCh--HHHHHHHHHhhhcCCCCEEEecCCcccc
Q 001895 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS--LETITLLLALKVEYPNNVHLIRGNHEAA 775 (999)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s--~evl~ll~~lk~~~P~~v~llrGNHE~~ 775 (999)
.+|++|+|+||+...| ..+..+ -+|++||++|+|... .+++.+|..+. + ..++++.||||..
T Consensus 60 mri~~iSD~H~~~~~l-------~i~~~D------~vi~aGDl~~~g~~~e~~~~~~~L~~l~--~-~~v~~V~GNHD~~ 123 (296)
T 3rl5_A 60 TRFVCISDTRSRTDGI-------QMPYGD------ILLHTGDFTELGLPSEVKKFNDWLGNLP--Y-EYKIVIAGNHELT 123 (296)
T ss_dssp EEEEEEBCCTTCCTTC-------CCCSCS------EEEECSCCSSSCCHHHHHHHHHHHHTSC--C-SEEEECCCTTCGG
T ss_pred eEEEEEeeCCCCcchh-------ccCCCC------EEEECCcccCCCCHHHHHHHHHHHHhCC--C-CeEEEEcCCcccc
Confidence 4699999999998653 223332 688899999999742 23344444432 1 2489999999985
Q ss_pred c
Q 001895 776 D 776 (999)
Q Consensus 776 ~ 776 (999)
.
T Consensus 124 ~ 124 (296)
T 3rl5_A 124 F 124 (296)
T ss_dssp G
T ss_pred c
Confidence 3
No 45
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=97.22 E-value=0.0005 Score=73.72 Aligned_cols=67 Identities=19% Similarity=0.220 Sum_probs=46.3
Q ss_pred CeEEEecCCCCH------------HHHHHHHHHhCCC--CCCCCccceeEEEeccccCCCCChH--HHHHHHHHhhhcCC
Q 001895 699 PIKIFGDLHGQF------------GDLMRLFDEYGSP--STAGDIAYIDYLFLGDYVDRGQHSL--ETITLLLALKVEYP 762 (999)
Q Consensus 699 ~i~vvGDiHG~~------------~~L~~il~~~g~~--~~~~~~~~~~~vfLGDyVDRG~~s~--evl~ll~~lk~~~P 762 (999)
+|.+++|+|+.. ..|.++++.+... ..+ -+|++||+++.|.... ++..+|..| +
T Consensus 2 ri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d------~vi~~GDl~~~~~~~~~~~~~~~l~~l----~ 71 (274)
T 3d03_A 2 LLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPD------AVVVSGDIVNCGRPEEYQVARQILGSL----N 71 (274)
T ss_dssp EEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCS------EEEEESCCBSSCCHHHHHHHHHHHTTC----S
T ss_pred EEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCC------EEEECCCCCCCCCHHHHHHHHHHHHhc----C
Confidence 589999999985 6788888776432 122 6889999999987421 222333222 3
Q ss_pred CCEEEecCCcccc
Q 001895 763 NNVHLIRGNHEAA 775 (999)
Q Consensus 763 ~~v~llrGNHE~~ 775 (999)
-.++.++||||..
T Consensus 72 ~p~~~v~GNHD~~ 84 (274)
T 3d03_A 72 YPLYLIPGNHDDK 84 (274)
T ss_dssp SCEEEECCTTSCH
T ss_pred CCEEEECCCCCCH
Confidence 3599999999984
No 46
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.03 E-value=0.096 Score=55.30 Aligned_cols=185 Identities=17% Similarity=0.098 Sum_probs=116.8
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcc
Q 001895 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (999)
Q Consensus 113 ~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG 192 (999)
++.||+-.|..+. +.+..+|+.+++-..-... |..-.+.+.+..+++||+...
T Consensus 30 ~~~LyestG~~g~------------------------S~v~~vD~~tgkv~~~~~l---~~~~fgeGi~~~~~~ly~ltw 82 (243)
T 3mbr_X 30 RGHLYESTGETGR------------------------SSVRKVDLETGRILQRAEV---PPPYFGAGIVAWRDRLIQLTW 82 (243)
T ss_dssp TTEEEEEECCTTS------------------------CEEEEEETTTCCEEEEEEC---CTTCCEEEEEEETTEEEEEES
T ss_pred CCEEEEECCCCCC------------------------ceEEEEECCCCCEEEEEeC---CCCcceeEEEEeCCEEEEEEe
Confidence 6799999997543 3788999999986655443 344566778888999999865
Q ss_pred cCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcc
Q 001895 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (999)
Q Consensus 193 ~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (999)
. .+.+++||..+. ..+. ..+.+..+.+++.-++ +||+.=| .+.++.+|+.+.. .-..+.
T Consensus 83 ~------~~~v~v~D~~tl----~~~~---ti~~~~~Gwglt~dg~-~L~vSdg------s~~l~~iDp~t~~-~~~~I~ 141 (243)
T 3mbr_X 83 R------NHEGFVYDLATL----TPRA---RFRYPGEGWALTSDDS-HLYMSDG------TAVIRKLDPDTLQ-QVGSIK 141 (243)
T ss_dssp S------SSEEEEEETTTT----EEEE---EEECSSCCCEEEECSS-CEEEECS------SSEEEEECTTTCC-EEEEEE
T ss_pred e------CCEEEEEECCcC----cEEE---EEeCCCCceEEeeCCC-EEEEECC------CCeEEEEeCCCCe-EEEEEE
Confidence 3 368999999884 2222 2233346777775554 7888644 3579999998862 122222
Q ss_pred cCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCC--------CcceeEEEEE--
Q 001895 273 PEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPS--------PRYQHAAVFV-- 342 (999)
Q Consensus 273 ~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~--------~R~~hsav~~-- 342 (999)
.. ..+.+...-......+++||+--- ..+++...|+.+...-.|....+..|. .-.-.+.+..
T Consensus 142 V~-~~g~~~~~lNeLe~~~G~lyanvw------~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~ 214 (243)
T 3mbr_X 142 VT-AGGRPLDNLNELEWVNGELLANVW------LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAE 214 (243)
T ss_dssp CE-ETTEECCCEEEEEEETTEEEEEET------TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETT
T ss_pred Ec-cCCcccccceeeEEeCCEEEEEEC------CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCC
Confidence 21 111112222334455889886432 245788888887666678877754322 1233445554
Q ss_pred CCEEEEEcCc
Q 001895 343 NARLHVSGGA 352 (999)
Q Consensus 343 ~~~L~V~GG~ 352 (999)
+++|||.|=.
T Consensus 215 ~~~lfVTGK~ 224 (243)
T 3mbr_X 215 HDRLFVTGKR 224 (243)
T ss_dssp TTEEEEEETT
T ss_pred CCEEEEECCC
Confidence 4789998754
No 47
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.03 E-value=0.6 Score=51.67 Aligned_cols=186 Identities=16% Similarity=0.194 Sum_probs=102.7
Q ss_pred eEEEEECCCCc--EEEecCCCCC----CCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCC
Q 001895 151 DVHCYDVLTNK--WSRITPFGEP----PTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPG 224 (999)
Q Consensus 151 dv~~yD~~t~~--W~~l~~~g~~----P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~ 224 (999)
.+++||..+++ |+.-...... .......+.++.++.||+.... ..++.||..+....|+.-.. +
T Consensus 64 ~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~-------g~l~a~d~~tG~~~W~~~~~-~-- 133 (376)
T 3q7m_A 64 LVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK-------AQVYALNTSDGTVAWQTKVA-G-- 133 (376)
T ss_dssp EEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETT-------SEEEEEETTTCCEEEEEECS-S--
T ss_pred eEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCC-------CEEEEEECCCCCEEEEEeCC-C--
Confidence 78899998764 7765432100 0122233445567888886432 47999999887667876431 1
Q ss_pred CCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCC
Q 001895 225 PGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASS 304 (999)
Q Consensus 225 P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~ 304 (999)
....+.++.++ .+|+... + ..++.||..+....|+.-...... ........++.++.+|+ |..+
T Consensus 134 ---~~~~~p~~~~~-~v~v~~~-~-----g~l~~~d~~tG~~~W~~~~~~~~~--~~~~~~~~~~~~~~v~~-g~~~--- 197 (376)
T 3q7m_A 134 ---EALSRPVVSDG-LVLIHTS-N-----GQLQALNEADGAVKWTVNLDMPSL--SLRGESAPTTAFGAAVV-GGDN--- 197 (376)
T ss_dssp ---CCCSCCEEETT-EEEEECT-T-----SEEEEEETTTCCEEEEEECCC-------CCCCCCEEETTEEEE-CCTT---
T ss_pred ---ceEcCCEEECC-EEEEEcC-C-----CeEEEEECCCCcEEEEEeCCCCce--eecCCCCcEEECCEEEE-EcCC---
Confidence 11222334455 6776432 2 379999998887789875432210 01112233444777776 3221
Q ss_pred CCcccEEEEecCCCCeEEEEECCCCCCCCc--------ceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCC--e
Q 001895 305 VPLASAYGLAKHRDGRWEWAIAPGVSPSPR--------YQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAG--V 374 (999)
Q Consensus 305 ~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R--------~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~--~ 374 (999)
..++.++.. +++-.|...... |... .....++.++.+|+.+. ...+++||++++ .
T Consensus 198 ---g~l~~~d~~-tG~~~w~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~v~~~~~----------~g~l~~~d~~tG~~~ 262 (376)
T 3q7m_A 198 ---GRVSAVLME-QGQMIWQQRISQ-ATGSTEIDRLSDVDTTPVVVNGVVFALAY----------NGNLTALDLRSGQIM 262 (376)
T ss_dssp ---TEEEEEETT-TCCEEEEEECCC------------CCCCCCEEETTEEEEECT----------TSCEEEEETTTCCEE
T ss_pred ---CEEEEEECC-CCcEEEEEeccc-CCCCcccccccccCCCcEEECCEEEEEec----------CcEEEEEECCCCcEE
Confidence 246666654 455566554322 1111 22334566888888642 234899999877 4
Q ss_pred EEE
Q 001895 375 WCD 377 (999)
Q Consensus 375 W~~ 377 (999)
|..
T Consensus 263 w~~ 265 (376)
T 3q7m_A 263 WKR 265 (376)
T ss_dssp EEE
T ss_pred eec
Confidence 664
No 48
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=96.95 E-value=0.00038 Score=76.21 Aligned_cols=71 Identities=20% Similarity=0.185 Sum_probs=47.7
Q ss_pred CeEEEecCCCCH-------------------HHHHHHHHHhCCCCCCCCccceeEEEeccccCCCC----ChHHHHHHHH
Q 001895 699 PIKIFGDLHGQF-------------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQ----HSLETITLLL 755 (999)
Q Consensus 699 ~i~vvGDiHG~~-------------------~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~----~s~evl~ll~ 755 (999)
++++++|+|... ..|.++++.+.....+ -+|++||++|.|. ...+.+..++
T Consensus 7 ~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d------~vi~~GD~~~~~~~~~~~~~~~~~~~~ 80 (322)
T 2nxf_A 7 TFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQ------CVVQLGDIIDGHNRRRDASDRALDTVM 80 (322)
T ss_dssp EEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCS------EEEECSCCBCTHHHHTTCHHHHHHHHH
T ss_pred EEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCC------EEEECCCccCCCCCcchHHHHHHHHHH
Confidence 589999999876 5566666655322222 5889999999875 1234444444
Q ss_pred HhhhcCCCCEEEecCCcccc
Q 001895 756 ALKVEYPNNVHLIRGNHEAA 775 (999)
Q Consensus 756 ~lk~~~P~~v~llrGNHE~~ 775 (999)
.+-...+..++++.||||..
T Consensus 81 ~~l~~~~~p~~~v~GNHD~~ 100 (322)
T 2nxf_A 81 AELDACSVDVHHVWGNHEFY 100 (322)
T ss_dssp HHHHTTCSEEEECCCHHHHH
T ss_pred HHHHhcCCcEEEecCCCCcc
Confidence 33333445799999999985
No 49
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=96.95 E-value=0.00064 Score=75.88 Aligned_cols=71 Identities=23% Similarity=0.263 Sum_probs=44.2
Q ss_pred CCeEEEecCC-C----C-----------HHHHHHHHHHhCCCCCCCCccceeEEEecc-ccCCCCChHHH----HHHHHH
Q 001895 698 APIKIFGDLH-G----Q-----------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGD-YVDRGQHSLET----ITLLLA 756 (999)
Q Consensus 698 ~~i~vvGDiH-G----~-----------~~~L~~il~~~g~~~~~~~~~~~~~vfLGD-yVDRG~~s~ev----l~ll~~ 756 (999)
.+|+.++|+| | . ...|.++++.+.-...+ -+|+.|| ++|++..+.+. ..+|..
T Consensus 19 mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D------~vliaGD~l~d~~~~~~~~~~~~~~~l~~ 92 (336)
T 2q8u_A 19 LKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVD------LILLTGDLLHSRNNPSVVALHDLLDYLKR 92 (336)
T ss_dssp EEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCS------EEEEESCSBSCSSCCCHHHHHHHHHHHHH
T ss_pred eEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCC------EEEECCccccCCCCCCHHHHHHHHHHHHH
Confidence 4799999999 8 3 34455555544321222 5888999 99999887764 455555
Q ss_pred hhhcCCCCEEEecCCccccc
Q 001895 757 LKVEYPNNVHLIRGNHEAAD 776 (999)
Q Consensus 757 lk~~~P~~v~llrGNHE~~~ 776 (999)
|+.. -.|+++.||||...
T Consensus 93 L~~~--~pv~~i~GNHD~~~ 110 (336)
T 2q8u_A 93 MMRT--APVVVLPGNHDWKG 110 (336)
T ss_dssp HHHH--SCEEECCC------
T ss_pred HHhc--CCEEEECCCCCccc
Confidence 5533 35999999999865
No 50
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.90 E-value=0.19 Score=55.05 Aligned_cols=183 Identities=11% Similarity=0.005 Sum_probs=100.9
Q ss_pred CeEEEEECCCCcEE-EecCCCCCCCCCcCcEEEE-eCCEEEEEcccCCCCCCcCcEEEEecCCCCCceE-EEeecCCCC-
Q 001895 150 ADVHCYDVLTNKWS-RITPFGEPPTPRAAHVATA-VGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWH-RVVVQGPGP- 225 (999)
Q Consensus 150 ~dv~~yD~~t~~W~-~l~~~g~~P~pR~~hsa~~-~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~-~v~~~g~~P- 225 (999)
+.+.++|+.+.+-. .+... ..-+.++. -++++|+.... .+.++++|+.+.+ -. .++ .+...
T Consensus 64 ~~v~viD~~t~~~~~~i~~~------~~p~~i~~~~~g~lyv~~~~------~~~v~~iD~~t~~--~~~~i~-~g~~~~ 128 (328)
T 3dsm_A 64 HVIFAIDINTFKEVGRITGF------TSPRYIHFLSDEKAYVTQIW------DYRIFIINPKTYE--ITGYIE-CPDMDM 128 (328)
T ss_dssp TEEEEEETTTCCEEEEEECC------SSEEEEEEEETTEEEEEEBS------CSEEEEEETTTTE--EEEEEE-CTTCCT
T ss_pred CEEEEEECcccEEEEEcCCC------CCCcEEEEeCCCeEEEEECC------CCeEEEEECCCCe--EEEEEE-cCCccc
Confidence 47899999988763 34221 22234444 56799988742 3689999998853 22 222 22200
Q ss_pred CCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCC
Q 001895 226 GPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSV 305 (999)
Q Consensus 226 ~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~ 305 (999)
....-+.+++.++ +||+..- ..-+.+.++|+.+. +....-..+..| +......++++|+.........
T Consensus 129 ~~~~p~~i~~~~~-~lyv~~~----~~~~~v~viD~~t~--~~~~~i~~g~~p-----~~i~~~~dG~l~v~~~~~~~~~ 196 (328)
T 3dsm_A 129 ESGSTEQMVQYGK-YVYVNCW----SYQNRILKIDTETD--KVVDELTIGIQP-----TSLVMDKYNKMWTITDGGYEGS 196 (328)
T ss_dssp TTCBCCCEEEETT-EEEEEEC----TTCCEEEEEETTTT--EEEEEEECSSCB-----CCCEECTTSEEEEEBCCBCTTC
T ss_pred cCCCcceEEEECC-EEEEEcC----CCCCEEEEEECCCC--eEEEEEEcCCCc-----cceEEcCCCCEEEEECCCccCC
Confidence 0002334545444 8999842 12357999999988 544332222222 1223344688888753221111
Q ss_pred C----cccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE--CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeE
Q 001895 306 P----LASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (999)
Q Consensus 306 ~----~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~--~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W 375 (999)
. ...++.++..+. +....... |....-..+++. ++.||+..+ .+++||+.+.+.
T Consensus 197 ~~~~~~~~v~~id~~t~-~v~~~~~~---~~g~~p~~la~~~d~~~lyv~~~------------~v~~~d~~t~~~ 256 (328)
T 3dsm_A 197 PYGYEAPSLYRIDAETF-TVEKQFKF---KLGDWPSEVQLNGTRDTLYWINN------------DIWRMPVEADRV 256 (328)
T ss_dssp SSCBCCCEEEEEETTTT-EEEEEEEC---CTTCCCEEEEECTTSCEEEEESS------------SEEEEETTCSSC
T ss_pred ccccCCceEEEEECCCC-eEEEEEec---CCCCCceeEEEecCCCEEEEEcc------------EEEEEECCCCce
Confidence 1 256888887654 33322111 122223455555 567888643 489999998875
No 51
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.83 E-value=0.32 Score=53.28 Aligned_cols=228 Identities=8% Similarity=-0.036 Sum_probs=126.2
Q ss_pred cCeEEEEECCCCcEEEecCC--CCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCC
Q 001895 149 TADVHCYDVLTNKWSRITPF--GEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (999)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~--g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~ 226 (999)
.+.+..||+.++++..-... ...+.....+.++..++++|+.... .+.+.++|+.+.... ..++ .
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~------~~~v~viD~~t~~~~-~~i~---~--- 82 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNN------SHVIFAIDINTFKEV-GRIT---G--- 82 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGG------GTEEEEEETTTCCEE-EEEE---C---
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcC------CCEEEEEECcccEEE-EEcC---C---
Confidence 35789999999987653210 0113334456677789999998753 257999999885311 2232 1
Q ss_pred CCcccEEEE-ECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCC--CCccceEEEEEeCCEEEEEeccCCC
Q 001895 227 PRYGHVMAL-VGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGP--PPCMYATASARSDGLLLLCGGRDAS 303 (999)
Q Consensus 227 ~R~~h~~~v-~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P--~~r~~~~a~~~~~~~LyvfGG~~~~ 303 (999)
...-+.+++ -++ ++|+.... -+.+.++|+.+....++. . .+... ...-.+ +++.++++|+..-.
T Consensus 83 ~~~p~~i~~~~~g-~lyv~~~~-----~~~v~~iD~~t~~~~~~i-~-~g~~~~~~~~p~~--i~~~~~~lyv~~~~--- 149 (328)
T 3dsm_A 83 FTSPRYIHFLSDE-KAYVTQIW-----DYRIFIINPKTYEITGYI-E-CPDMDMESGSTEQ--MVQYGKYVYVNCWS--- 149 (328)
T ss_dssp CSSEEEEEEEETT-EEEEEEBS-----CSEEEEEETTTTEEEEEE-E-CTTCCTTTCBCCC--EEEETTEEEEEECT---
T ss_pred CCCCcEEEEeCCC-eEEEEECC-----CCeEEEEECCCCeEEEEE-E-cCCccccCCCcce--EEEECCEEEEEcCC---
Confidence 222334444 455 89998743 357999999988333322 1 11100 001112 22268999998421
Q ss_pred CCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCC-CcccCCeEEEEECCCCeEEEcccC
Q 001895 304 SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGR-MVEDSSSVAVLDTAAGVWCDTKSV 381 (999)
Q Consensus 304 ~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~-~~~~~~~v~vyD~~t~~W~~v~~~ 381 (999)
..+.+..++..+. +..+....+..| +.+++- ++++|+......... .....+.|+++|+++.+....-..
T Consensus 150 --~~~~v~viD~~t~-~~~~~i~~g~~p-----~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~ 221 (328)
T 3dsm_A 150 --YQNRILKIDTETD-KVVDELTIGIQP-----TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKF 221 (328)
T ss_dssp --TCCEEEEEETTTT-EEEEEEECSSCB-----CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEEC
T ss_pred --CCCEEEEEECCCC-eEEEEEEcCCCc-----cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEec
Confidence 1245777777654 444433322222 223332 588888754321110 001136799999999986643222
Q ss_pred cCCCCCCCcccccCCCCCccCCCCcceeEEEEE--CCEEEEEcCCCCCcCcCcEEEeecc
Q 001895 382 VTSPRTGRYSADAAGGDAAVELTRRCRHAAAAV--GDLIFIYGGLRGGVLLDDLLVAEDL 439 (999)
Q Consensus 382 ~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~--~~~LyV~GG~~~~~~l~Dv~~ld~~ 439 (999)
+....-.++++. +++||+..+ .++++|..
T Consensus 222 ---------------------~~g~~p~~la~~~d~~~lyv~~~--------~v~~~d~~ 252 (328)
T 3dsm_A 222 ---------------------KLGDWPSEVQLNGTRDTLYWINN--------DIWRMPVE 252 (328)
T ss_dssp ---------------------CTTCCCEEEEECTTSCEEEEESS--------SEEEEETT
T ss_pred ---------------------CCCCCceeEEEecCCCEEEEEcc--------EEEEEECC
Confidence 111122344554 568888754 67888764
No 52
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=96.80 E-value=0.0013 Score=74.92 Aligned_cols=72 Identities=15% Similarity=0.159 Sum_probs=48.8
Q ss_pred CCeEEEecCCCCH-------------HHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHH----HHHHHHhhhc
Q 001895 698 APIKIFGDLHGQF-------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLET----ITLLLALKVE 760 (999)
Q Consensus 698 ~~i~vvGDiHG~~-------------~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~ev----l~ll~~lk~~ 760 (999)
.+|++++|+|+.. ..|.++++.+.....+ -+|+.||++|++.-+.+. +.+|..|+..
T Consensus 21 mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D------~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~~ 94 (386)
T 3av0_A 21 MMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPD------VVLHSGDLFNDLRPPVKALRIAMQAFKKLHEN 94 (386)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCS------EEEECSCSBSSSSCCHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCC------EEEECCCCCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 4699999999762 3466777665432222 688899999999555443 3444445331
Q ss_pred CCCCEEEecCCccccc
Q 001895 761 YPNNVHLIRGNHEAAD 776 (999)
Q Consensus 761 ~P~~v~llrGNHE~~~ 776 (999)
+-.|+++.||||...
T Consensus 95 -~~pv~~v~GNHD~~~ 109 (386)
T 3av0_A 95 -NIKVYIVAGNHEMPR 109 (386)
T ss_dssp -TCEEEECCCGGGSCS
T ss_pred -CCcEEEEcCCCCCCc
Confidence 236999999999854
No 53
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.76 E-value=0.54 Score=52.07 Aligned_cols=178 Identities=13% Similarity=0.187 Sum_probs=104.2
Q ss_pred cCeEEEEECCCCc--EEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCC
Q 001895 149 TADVHCYDVLTNK--WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (999)
Q Consensus 149 ~~dv~~yD~~t~~--W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~ 226 (999)
...++.||+.+++ |+.-.... ....+...+.++.++.+|+ |.. ...++.||..+....|..-. ..|.
T Consensus 152 ~g~l~~~d~~tG~~~W~~~~~~~-~~~~~~~~~~~~~~~~v~~-g~~------~g~l~~~d~~tG~~~w~~~~---~~~~ 220 (376)
T 3q7m_A 152 NGQLQALNEADGAVKWTVNLDMP-SLSLRGESAPTTAFGAAVV-GGD------NGRVSAVLMEQGQMIWQQRI---SQAT 220 (376)
T ss_dssp TSEEEEEETTTCCEEEEEECCC------CCCCCCEEETTEEEE-CCT------TTEEEEEETTTCCEEEEEEC---CC--
T ss_pred CCeEEEEECCCCcEEEEEeCCCC-ceeecCCCCcEEECCEEEE-EcC------CCEEEEEECCCCcEEEEEec---ccCC
Confidence 4469999998875 88654321 1111222344555777666 321 24699999988766788654 2221
Q ss_pred CC--------cccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEe
Q 001895 227 PR--------YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCG 298 (999)
Q Consensus 227 ~R--------~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfG 298 (999)
.. .....++.++ .+|+.+ .+ ..+++||+.+....|+.-.. ........++.+|+..
T Consensus 221 ~~~~~~~~~~~~~~p~~~~~-~v~~~~-~~-----g~l~~~d~~tG~~~w~~~~~---------~~~~~~~~~~~l~~~~ 284 (376)
T 3q7m_A 221 GSTEIDRLSDVDTTPVVVNG-VVFALA-YN-----GNLTALDLRSGQIMWKRELG---------SVNDFIVDGNRIYLVD 284 (376)
T ss_dssp ---------CCCCCCEEETT-EEEEEC-TT-----SCEEEEETTTCCEEEEECCC---------CEEEEEEETTEEEEEE
T ss_pred CCcccccccccCCCcEEECC-EEEEEe-cC-----cEEEEEECCCCcEEeeccCC---------CCCCceEECCEEEEEc
Confidence 11 1223334454 677754 22 36899999888778986421 1233455688898875
Q ss_pred ccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCe
Q 001895 299 GRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (999)
Q Consensus 299 G~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~ 374 (999)
. ...++.++.. +++-.|..... ..+...+.++.++.||+... ...+++||+.+++
T Consensus 285 ~-------~g~l~~~d~~-tG~~~w~~~~~---~~~~~~~~~~~~~~l~v~~~----------~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 285 Q-------NDRVMALTID-GGVTLWTQSDL---LHRLLTSPVLYNGNLVVGDS----------EGYLHWINVEDGR 339 (376)
T ss_dssp T-------TCCEEEEETT-TCCEEEEECTT---TTSCCCCCEEETTEEEEECT----------TSEEEEEETTTCC
T ss_pred C-------CCeEEEEECC-CCcEEEeeccc---CCCcccCCEEECCEEEEEeC----------CCeEEEEECCCCc
Confidence 3 1246777765 44656765421 12233345567888888632 2359999999886
No 54
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=96.74 E-value=0.0014 Score=73.03 Aligned_cols=70 Identities=21% Similarity=0.235 Sum_probs=45.8
Q ss_pred CeEEEecCCCCH-------------HHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHH----HHHHhhhcC
Q 001895 699 PIKIFGDLHGQF-------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETIT----LLLALKVEY 761 (999)
Q Consensus 699 ~i~vvGDiHG~~-------------~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~----ll~~lk~~~ 761 (999)
++++++|+|... ..|.++++.+.....+ -+|+.||++|++..+.+.+. +|..|+. .
T Consensus 2 kilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D------~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~-~ 74 (333)
T 1ii7_A 2 KFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVD------FILIAGDLFHSSRPSPGTLKKAIALLQIPKE-H 74 (333)
T ss_dssp EEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCS------EEEEESCSBSSSSCCHHHHHHHHHHHHHHHT-T
T ss_pred EEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCC------EEEECCCcCCCCCCCHHHHHHHHHHHHHHHH-C
Confidence 588999999874 3455555544322222 68889999999855544443 3444432 1
Q ss_pred CCCEEEecCCcccc
Q 001895 762 PNNVHLIRGNHEAA 775 (999)
Q Consensus 762 P~~v~llrGNHE~~ 775 (999)
.-.|+++.||||..
T Consensus 75 ~~~v~~v~GNHD~~ 88 (333)
T 1ii7_A 75 SIPVFAIEGNHDRT 88 (333)
T ss_dssp TCCEEEECCTTTCC
T ss_pred CCcEEEeCCcCCCc
Confidence 23599999999985
No 55
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=96.32 E-value=0.0031 Score=73.02 Aligned_cols=61 Identities=8% Similarity=-0.003 Sum_probs=37.1
Q ss_pred CHHHHHHHHHHcCCcEEEEeccccccceEEe-cCCeEEEEecccccCCCCCCeEEEEEEcCCc
Q 001895 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFERF-AQGHLITLFSATNYCGTANNAGAILVLGRDL 944 (999)
Q Consensus 883 g~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~-~~~~~iTvFSa~~y~~~~~n~ga~l~~~~~~ 944 (999)
+.+.+.+.+++.++++++-||.=........ .+|+-+.++.+.-.+. ..+.=+++.++++.
T Consensus 261 ~~~~l~~ll~~~~v~lvl~GH~H~~~~~~~~~~~g~~~~~i~~gs~~~-~p~~y~il~i~~~~ 322 (443)
T 2xmo_A 261 YNQQVIDALTEGAMDFSLSGHIHTQNIRSAKSTDGKEITDIVTNALSV-FPHKYGNITYSAKN 322 (443)
T ss_dssp THHHHHHHHHHTTCCEEEECSSCSCEEEEEECTTSCEEEEEECCCTTS-TTCEEEEEEEETTT
T ss_pred cHHHHHHHHHHcCCeEEEECCcccCchhhcccCCCCceEEEEcCcccc-CCCCeEEEEEeCCC
Confidence 5678889999999999999997654332221 2444344443333332 23344667776654
No 56
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.26 E-value=1.4 Score=46.29 Aligned_cols=208 Identities=16% Similarity=0.062 Sum_probs=123.5
Q ss_pred cEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEE
Q 001895 178 HVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVW 257 (999)
Q Consensus 178 hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~ 257 (999)
+.....++.+|+..|..+ .+.+.++|+.+.. -..-. ++|..-++.+++..++ +||+....+ +.++
T Consensus 24 qGL~~~~~~LyestG~~g----~S~v~~vD~~tgk--v~~~~---~l~~~~fgeGi~~~~~-~ly~ltw~~-----~~v~ 88 (243)
T 3mbr_X 24 EGLFYLRGHLYESTGETG----RSSVRKVDLETGR--ILQRA---EVPPPYFGAGIVAWRD-RLIQLTWRN-----HEGF 88 (243)
T ss_dssp EEEEEETTEEEEEECCTT----SCEEEEEETTTCC--EEEEE---ECCTTCCEEEEEEETT-EEEEEESSS-----SEEE
T ss_pred ccEEEECCEEEEECCCCC----CceEEEEECCCCC--EEEEE---eCCCCcceeEEEEeCC-EEEEEEeeC-----CEEE
Confidence 466777889999988643 2579999999863 33322 4566667788888887 899986543 5899
Q ss_pred EEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCC-cce
Q 001895 258 ALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSP-RYQ 336 (999)
Q Consensus 258 ~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~-R~~ 336 (999)
+||+.+. +-..--+.+ ...-+++..+++||+.-| .+.++.+|+.+...-.-..+... +.+ +.-
T Consensus 89 v~D~~tl--~~~~ti~~~------~~Gwglt~dg~~L~vSdg-------s~~l~~iDp~t~~~~~~I~V~~~-g~~~~~l 152 (243)
T 3mbr_X 89 VYDLATL--TPRARFRYP------GEGWALTSDDSHLYMSDG-------TAVIRKLDPDTLQQVGSIKVTAG-GRPLDNL 152 (243)
T ss_dssp EEETTTT--EEEEEEECS------SCCCEEEECSSCEEEECS-------SSEEEEECTTTCCEEEEEECEET-TEECCCE
T ss_pred EEECCcC--cEEEEEeCC------CCceEEeeCCCEEEEECC-------CCeEEEEeCCCCeEEEEEEEccC-Ccccccc
Confidence 9999886 332221111 122345555778888744 23577888876644444444321 222 222
Q ss_pred eEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccCcC-CCCCCCcccccCCCCCccCCCCcceeEEEEE-
Q 001895 337 HAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVT-SPRTGRYSADAAGGDAAVELTRRCRHAAAAV- 414 (999)
Q Consensus 337 hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~-~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~- 414 (999)
.-+...+++||+--- ..++|.+.|+++++-...-.+.. .+.... ...+..-.--+.+..
T Consensus 153 NeLe~~~G~lyanvw---------~s~~I~vIDp~tG~V~~~idl~~l~~~~~~----------~~~~~~~vlNGIA~d~ 213 (243)
T 3mbr_X 153 NELEWVNGELLANVW---------LTSRIARIDPASGKVVAWIDLQALVPDADA----------LTDSTNDVLNGIAFDA 213 (243)
T ss_dssp EEEEEETTEEEEEET---------TTTEEEEECTTTCBEEEEEECGGGSTTTTS----------CCCTTSSCEEEEEEET
T ss_pred eeeEEeCCEEEEEEC---------CCCeEEEEECCCCCEEEEEECCcCcccccc----------ccCCcCCceEEEEEcC
Confidence 335566899886421 25789999999986443332211 110000 000112233455555
Q ss_pred -CCEEEEEcCCCCCcCcCcEEEeeccc
Q 001895 415 -GDLIFIYGGLRGGVLLDDLLVAEDLA 440 (999)
Q Consensus 415 -~~~LyV~GG~~~~~~l~Dv~~ld~~~ 440 (999)
+++|||.|= +...+|.+.+.+
T Consensus 214 ~~~~lfVTGK-----~wp~~~~v~~~~ 235 (243)
T 3mbr_X 214 EHDRLFVTGK-----RWPMLYEIRLTP 235 (243)
T ss_dssp TTTEEEEEET-----TCSEEEEEEECC
T ss_pred CCCEEEEECC-----CCCcEEEEEEec
Confidence 679999985 467777777654
No 57
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.18 E-value=0.23 Score=52.97 Aligned_cols=185 Identities=11% Similarity=-0.010 Sum_probs=113.0
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcc
Q 001895 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (999)
Q Consensus 113 ~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG 192 (999)
++.||+-.|..+. +.+..+|+.+++-..-... +..-.+.+.+..+++||+...
T Consensus 52 ~~~LyestG~~g~------------------------S~v~~vD~~Tgkv~~~~~l---~~~~FgeGit~~g~~ly~ltw 104 (262)
T 3nol_A 52 NGYFYESTGLNGR------------------------SSIRKVDIESGKTLQQIEL---GKRYFGEGISDWKDKIVGLTW 104 (262)
T ss_dssp TTEEEEEEEETTE------------------------EEEEEECTTTCCEEEEEEC---CTTCCEEEEEEETTEEEEEES
T ss_pred CCEEEEECCCCCC------------------------ceEEEEECCCCcEEEEEec---CCccceeEEEEeCCEEEEEEe
Confidence 5789999886432 3788999999876554443 333455667888999999965
Q ss_pred cCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcc
Q 001895 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (999)
Q Consensus 193 ~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (999)
. .+.+++||..+.. .-.+++ .+-.+.+++.-++ .||+.-| .+.++.+|+.+.. .-..+.
T Consensus 105 ~------~~~v~v~D~~t~~-~~~ti~------~~~eG~glt~dg~-~L~~SdG------s~~i~~iDp~T~~-v~~~I~ 163 (262)
T 3nol_A 105 K------NGLGFVWNIRNLR-QVRSFN------YDGEGWGLTHNDQ-YLIMSDG------TPVLRFLDPESLT-PVRTIT 163 (262)
T ss_dssp S------SSEEEEEETTTCC-EEEEEE------CSSCCCCEEECSS-CEEECCS------SSEEEEECTTTCS-EEEEEE
T ss_pred e------CCEEEEEECccCc-EEEEEE------CCCCceEEecCCC-EEEEECC------CCeEEEEcCCCCe-EEEEEE
Confidence 3 3689999999853 223332 2336666765554 7888643 3579999998862 223332
Q ss_pred cCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCC-------CcceeEEEEE--C
Q 001895 273 PEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPS-------PRYQHAAVFV--N 343 (999)
Q Consensus 273 ~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~-------~R~~hsav~~--~ 343 (999)
.... ..+...-......+++||+--- ..+.+...|+.+...-.|....+..|. .-.-.+.++. .
T Consensus 164 V~~~-g~~~~~lNELe~~~G~lyan~w------~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~ 236 (262)
T 3nol_A 164 VTAH-GEELPELNELEWVDGEIFANVW------QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEH 236 (262)
T ss_dssp CEET-TEECCCEEEEEEETTEEEEEET------TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTT
T ss_pred eccC-CccccccceeEEECCEEEEEEc------cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCC
Confidence 2111 0011111123344889886421 245788888877656677777654321 1233555555 4
Q ss_pred CEEEEEcCc
Q 001895 344 ARLHVSGGA 352 (999)
Q Consensus 344 ~~L~V~GG~ 352 (999)
++|||.|-.
T Consensus 237 ~~lfVTGK~ 245 (262)
T 3nol_A 237 HRLFVTGKL 245 (262)
T ss_dssp TEEEEEETT
T ss_pred CEEEEECCC
Confidence 789998754
No 58
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.17 E-value=1.2 Score=47.69 Aligned_cols=185 Identities=10% Similarity=0.033 Sum_probs=107.6
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCc
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~ 229 (999)
+.+..+|+.+++-..-... +....+.+.+..++.+|+..-. .+.+++||..+.. .-..++ .+ .| .
T Consensus 44 s~v~~iD~~tg~v~~~i~l---~~~~fgeGi~~~g~~lyv~t~~------~~~v~viD~~t~~-v~~~i~-~g-~~---~ 108 (266)
T 2iwa_A 44 SSVRQVALQTGKVENIHKM---DDSYFGEGLTLLNEKLYQVVWL------KNIGFIYDRRTLS-NIKNFT-HQ-MK---D 108 (266)
T ss_dssp CEEEEEETTTCCEEEEEEC---CTTCCEEEEEEETTEEEEEETT------CSEEEEEETTTTE-EEEEEE-CC-SS---S
T ss_pred CEEEEEECCCCCEEEEEec---CCCcceEEEEEeCCEEEEEEec------CCEEEEEECCCCc-EEEEEE-CC-CC---C
Confidence 4799999999886554333 2333456777888999998643 3689999998752 112222 12 22 3
Q ss_pred ccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCccc
Q 001895 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLAS 309 (999)
Q Consensus 230 ~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d 309 (999)
+.+++. ++.++|+.-| .+.++.+|+.+.. .-..+... ..+.+...-....+.++++|+--. ..+.
T Consensus 109 g~glt~-Dg~~l~vs~g------s~~l~viD~~t~~-v~~~I~Vg-~~~~p~~~~nele~~dg~lyvn~~------~~~~ 173 (266)
T 2iwa_A 109 GWGLAT-DGKILYGSDG------TSILYEIDPHTFK-LIKKHNVK-YNGHRVIRLNELEYINGEVWANIW------QTDC 173 (266)
T ss_dssp CCEEEE-CSSSEEEECS------SSEEEEECTTTCC-EEEEEECE-ETTEECCCEEEEEEETTEEEEEET------TSSE
T ss_pred eEEEEE-CCCEEEEECC------CCeEEEEECCCCc-EEEEEEEC-CCCcccccceeEEEECCEEEEecC------CCCe
Confidence 444544 4447888643 3689999998862 12222221 111111112223334888887532 2457
Q ss_pred EEEEecCCCCeEEEEECCCCC--------CCCcceeEEEEE--CCEEEEEcCcCCCCCCcccCCeEEEEECCCC
Q 001895 310 AYGLAKHRDGRWEWAIAPGVS--------PSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAG 373 (999)
Q Consensus 310 ~~~~~~~~~~~W~w~~~~g~~--------P~~R~~hsav~~--~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~ 373 (999)
+..+|+.+...-.|....+.. +..-.-++.++. ++++||.|+. .+.|++.++.+.
T Consensus 174 V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~---------~~~v~~i~l~~~ 238 (266)
T 2iwa_A 174 IARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKL---------WPKLFEIKLHLV 238 (266)
T ss_dssp EEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETT---------CSEEEEEEEEEC
T ss_pred EEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCC---------CCeEEEEEEecc
Confidence 888888876556677664321 111233455555 4689999875 355777776543
No 59
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=95.90 E-value=0.76 Score=51.45 Aligned_cols=188 Identities=14% Similarity=0.063 Sum_probs=94.1
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
.+++||+.+++.......+........-..+.+ ++.+|+.|+. ...+++||+.+....+ .+. ....
T Consensus 145 ~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~------d~~v~~~d~~~~~~~~-~~~-----~~~~ 212 (433)
T 3bws_A 145 GMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQ------ANAVHVFDLKTLAYKA-TVD-----LTGK 212 (433)
T ss_dssp SEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGG------GTEEEEEETTTCCEEE-EEE-----CSSS
T ss_pred eEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECC------CCEEEEEECCCceEEE-EEc-----CCCC
Confidence 589999998887765332110011111122233 5688887764 2579999998753122 222 1112
Q ss_pred cccEEEEE-CCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCC--
Q 001895 229 YGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSV-- 305 (999)
Q Consensus 229 ~~h~~~v~-~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~-- 305 (999)
.-.+++.. ++..+|+.++.++ .+.+||+.+. +....-.... .....+...++..+++++......
T Consensus 213 ~~~~~~~~~~~~~l~~~~~~~~-----~i~~~d~~~~--~~~~~~~~~~-----~~~~~~~~~~g~~l~~~~~~~~~~~~ 280 (433)
T 3bws_A 213 WSKILLYDPIRDLVYCSNWISE-----DISVIDRKTK--LEIRKTDKIG-----LPRGLLLSKDGKELYIAQFSASNQES 280 (433)
T ss_dssp SEEEEEEETTTTEEEEEETTTT-----EEEEEETTTT--EEEEECCCCS-----EEEEEEECTTSSEEEEEEEESCTTCS
T ss_pred CeeEEEEcCCCCEEEEEecCCC-----cEEEEECCCC--cEEEEecCCC-----CceEEEEcCCCCEEEEEECCCCcccc
Confidence 22333343 3346777765544 7999999887 5443322211 122222333554555555433221
Q ss_pred CcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE--CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEE
Q 001895 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (999)
Q Consensus 306 ~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~--~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~ 377 (999)
....++.++..+. +..+.... +..-..+++. +..+|+.++. .+.+.+||+.+.+-..
T Consensus 281 ~dg~i~~~d~~~~-~~~~~~~~-----~~~~~~~~~~~~g~~l~~~~~~---------~~~v~v~d~~~~~~~~ 339 (433)
T 3bws_A 281 GGGRLGIYSMDKE-KLIDTIGP-----PGNKRHIVSGNTENKIYVSDMC---------CSKIEVYDLKEKKVQK 339 (433)
T ss_dssp CCEEEEEEETTTT-EEEEEEEE-----EECEEEEEECSSTTEEEEEETT---------TTEEEEEETTTTEEEE
T ss_pred CCCeEEEEECCCC-cEEeeccC-----CCCcceEEECCCCCEEEEEecC---------CCEEEEEECCCCcEEE
Confidence 1235666665543 22222110 0111223332 3368887654 3469999999876443
No 60
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.86 E-value=0.3 Score=52.14 Aligned_cols=182 Identities=7% Similarity=-0.069 Sum_probs=109.4
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcc
Q 001895 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (999)
Q Consensus 113 ~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG 192 (999)
++.||+-.|.. ..+..+|+.+++-..-. . +..-.+.+.+..+++||+...
T Consensus 64 ~~~Ly~stG~~--------------------------g~v~~iD~~Tgkv~~~~-l---~~~~FgeGit~~g~~Ly~ltw 113 (268)
T 3nok_A 64 QGHFFESTGHQ--------------------------GTLRQLSLESAQPVWME-R---LGNIFAEGLASDGERLYQLTW 113 (268)
T ss_dssp TTEEEEEETTT--------------------------TEEEECCSSCSSCSEEE-E---CTTCCEEEEEECSSCEEEEES
T ss_pred CCEEEEEcCCC--------------------------CEEEEEECCCCcEEeEE-C---CCCcceeEEEEeCCEEEEEEc
Confidence 68999999953 24888999988643332 2 233345668888999999865
Q ss_pred cCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcc
Q 001895 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (999)
Q Consensus 193 ~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (999)
. .+.+++||..+.. .-.+++ .+-.+.+++.-++ +||+.-| .+.++.+|+.+.. .-..+.
T Consensus 114 ~------~~~v~V~D~~Tl~-~~~ti~------~~~eGwGLt~Dg~-~L~vSdG------s~~l~~iDp~T~~-v~~~I~ 172 (268)
T 3nok_A 114 T------EGLLFTWSGMPPQ-RERTTR------YSGEGWGLCYWNG-KLVRSDG------GTMLTFHEPDGFA-LVGAVQ 172 (268)
T ss_dssp S------SCEEEEEETTTTE-EEEEEE------CSSCCCCEEEETT-EEEEECS------SSEEEEECTTTCC-EEEEEE
T ss_pred c------CCEEEEEECCcCc-EEEEEe------CCCceeEEecCCC-EEEEECC------CCEEEEEcCCCCe-EEEEEE
Confidence 3 3689999998852 122232 2334677776665 8998754 3589999998862 222222
Q ss_pred cCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCC--------CCCcceeEEEEE--
Q 001895 273 PEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVS--------PSPRYQHAAVFV-- 342 (999)
Q Consensus 273 ~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~--------P~~R~~hsav~~-- 342 (999)
... .+.+...-......+++||+-- + ..+.+..+|+.+...-.|....+.. +..-.-.+.+..
T Consensus 173 V~~-~g~~v~~lNeLe~~dG~lyanv-w-----~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~ 245 (268)
T 3nok_A 173 VKL-RGQPVELINELECANGVIYANI-W-----HSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPG 245 (268)
T ss_dssp CEE-TTEECCCEEEEEEETTEEEEEE-T-----TCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTT
T ss_pred eCC-CCcccccccccEEeCCEEEEEE-C-----CCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCC
Confidence 211 1111112223344588888632 1 2457888888776556677765321 111233444444
Q ss_pred CCEEEEEcCc
Q 001895 343 NARLHVSGGA 352 (999)
Q Consensus 343 ~~~L~V~GG~ 352 (999)
+++|||.|=.
T Consensus 246 ~~rlfVTGK~ 255 (268)
T 3nok_A 246 SGRIFMTGKL 255 (268)
T ss_dssp TCCEEEEETT
T ss_pred CCEEEEeCCC
Confidence 4689988754
No 61
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.77 E-value=0.53 Score=57.36 Aligned_cols=114 Identities=15% Similarity=0.159 Sum_probs=66.7
Q ss_pred eEEEEECCCCc--EEEecCCCCCCC-----CCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCC
Q 001895 151 DVHCYDVLTNK--WSRITPFGEPPT-----PRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGP 223 (999)
Q Consensus 151 dv~~yD~~t~~--W~~l~~~g~~P~-----pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~ 223 (999)
.++.+|..+++ |+.-........ .....+.++.+++||+... ...++.+|..+....|+.-.....
T Consensus 88 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~-------dg~l~alD~~tG~~~W~~~~~~~~ 160 (677)
T 1kb0_A 88 VVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW-------DGRLIALDAATGKEVWHQNTFEGQ 160 (677)
T ss_dssp CEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEETTTTC
T ss_pred eEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC-------CCEEEEEECCCCCEEeeecCCcCc
Confidence 68999998875 887543210000 0122345667888888643 257999999887777987531000
Q ss_pred CCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcc
Q 001895 224 GPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (999)
Q Consensus 224 ~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (999)
........+.++.++ .+|+..+......-..++.||..+....|+.-.
T Consensus 161 ~~~~~~~~~p~v~~~-~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 161 KGSLTITGAPRVFKG-KVIIGNGGAEYGVRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp CSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CcCcccccCcEEECC-EEEEEecccccCCCCEEEEEECCCCcEEEEecc
Confidence 111112223345565 676654322222346799999999887898754
No 62
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=95.75 E-value=0.004 Score=70.70 Aligned_cols=68 Identities=21% Similarity=0.235 Sum_probs=45.4
Q ss_pred CeEEEecCCCCHH----------------HHHHHHHHhCCCCCCCCccceeEEEecccc-CCCCChHHHH----HHHHHh
Q 001895 699 PIKIFGDLHGQFG----------------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYV-DRGQHSLETI----TLLLAL 757 (999)
Q Consensus 699 ~i~vvGDiHG~~~----------------~L~~il~~~g~~~~~~~~~~~~~vfLGDyV-DRG~~s~evl----~ll~~l 757 (999)
+|+.++|+|.... .|.++++.+.....+ -+|+.||++ |++..+.+.+ .+|..|
T Consensus 2 rilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D------~vliaGDl~hd~~~~~~~~~~~~~~~l~~l 75 (379)
T 3tho_B 2 KILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVD------LILLTGDLLHSRNNPSVVALHDLLDYLKRM 75 (379)
T ss_dssp EEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCS------EEEECSCCBSCSSSCCHHHHHHHHHHHHHH
T ss_pred eEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCC------EEEECCCccccCCCCCHHHHHHHHHHHHHH
Confidence 5889999997554 455555443211122 588899999 9987776544 344444
Q ss_pred hhcCCCCEEEecCCccc
Q 001895 758 KVEYPNNVHLIRGNHEA 774 (999)
Q Consensus 758 k~~~P~~v~llrGNHE~ 774 (999)
+.. -.|+++.||||.
T Consensus 76 ~~~--~~v~~i~GNHD~ 90 (379)
T 3tho_B 76 MRT--APVVVLPGNQDW 90 (379)
T ss_dssp HHH--SCEEECCCTTSC
T ss_pred HhC--CCEEEEcCCCcc
Confidence 433 469999999994
No 63
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=95.59 E-value=0.0099 Score=68.59 Aligned_cols=52 Identities=19% Similarity=0.162 Sum_probs=37.2
Q ss_pred CeEEEecCCCC------------HHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHH
Q 001895 699 PIKIFGDLHGQ------------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLA 756 (999)
Q Consensus 699 ~i~vvGDiHG~------------~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~ 756 (999)
+|+.++|+|-. +..|.++++.+.....+ -+|+.||++|++.-+.+++..++.
T Consensus 78 rilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D------~VliaGDLfd~~~ps~~a~~~~~~ 141 (472)
T 4fbk_A 78 RILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVD------MILLGGDIFHDNKPSRKALYQALR 141 (472)
T ss_dssp EEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCS------EEEECSCSBSSSSCCHHHHHHHHH
T ss_pred EEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCC------EEEEcCccccCCCCCHHHHHHHHH
Confidence 58999999964 33566666665332222 688999999999999888765443
No 64
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=95.54 E-value=0.011 Score=67.84 Aligned_cols=73 Identities=23% Similarity=0.223 Sum_probs=50.4
Q ss_pred CCeEEEecCCCCH------------HHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhc-----
Q 001895 698 APIKIFGDLHGQF------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVE----- 760 (999)
Q Consensus 698 ~~i~vvGDiHG~~------------~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~----- 760 (999)
.+|+.++|+|-.. ..|.++++.+.....+ -+|+.||++|++..+.+++..++.+-.+
T Consensus 33 mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D------~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~~~ 106 (431)
T 3t1i_A 33 FKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVD------FILLGGDLFHENKPSRKTLHTCLELLRKYCMGD 106 (431)
T ss_dssp EEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCS------EEEECSCCBSSSSCCHHHHHHHHHHHHHHHBCS
T ss_pred EEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCC------EEEEcCccccCCCCCHHHHHHHHHHHHHHhccC
Confidence 4589999999532 3556666554322222 6889999999999888877665554321
Q ss_pred -------------------------------CCCCEEEecCCccccc
Q 001895 761 -------------------------------YPNNVHLIRGNHEAAD 776 (999)
Q Consensus 761 -------------------------------~P~~v~llrGNHE~~~ 776 (999)
..-.||++.||||...
T Consensus 107 ~~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~~ 153 (431)
T 3t1i_A 107 RPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPT 153 (431)
T ss_dssp SCCCCEECSCC------------------CCBCSCEEECCCSSSCCB
T ss_pred CcccceeccchhhccccccccccccccccccCCCcEEEEccCCCCcc
Confidence 1236999999999864
No 65
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=95.39 E-value=0.014 Score=66.55 Aligned_cols=53 Identities=19% Similarity=0.154 Sum_probs=37.9
Q ss_pred CCeEEEecCCCC------------HHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHH
Q 001895 698 APIKIFGDLHGQ------------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLA 756 (999)
Q Consensus 698 ~~i~vvGDiHG~------------~~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~ 756 (999)
.+++.++|+|-. +..|.++++.+.....+ -+|+.||++|++.-+.+++..++.
T Consensus 14 mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D------~VliaGDLfd~~~p~~~~~~~~~~ 78 (417)
T 4fbw_A 14 IRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVD------MILLGGDIFHDNKPSRKALYQALR 78 (417)
T ss_dssp EEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCS------EEEECSCCBSSSSCCHHHHHHHHH
T ss_pred eEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCC------EEEEcCccccCCCCCHHHHHHHHH
Confidence 358999999975 34566666665332222 688999999999999887765443
No 66
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.17 E-value=1.5 Score=52.28 Aligned_cols=112 Identities=12% Similarity=0.101 Sum_probs=65.4
Q ss_pred eEEEEEC-CCCc--EEEecCCCCCCC--C---CcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecC
Q 001895 151 DVHCYDV-LTNK--WSRITPFGEPPT--P---RAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG 222 (999)
Q Consensus 151 dv~~yD~-~t~~--W~~l~~~g~~P~--p---R~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g 222 (999)
.+++||. .+.+ |+.-........ . ....+.++.+++||+... ...++.+|..+....|+.-..
T Consensus 74 ~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------dg~l~alD~~tG~~~W~~~~~-- 144 (571)
T 2ad6_A 74 NTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA-------NGHLLALDAKTGKINWEVEVC-- 144 (571)
T ss_dssp CEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECC--
T ss_pred EEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC-------CCEEEEEECCCCCEEEEecCC--
Confidence 7899999 7764 887533210000 0 112345667888888743 247999999887677986531
Q ss_pred CCCCC-CcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcc
Q 001895 223 PGPGP-RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (999)
Q Consensus 223 ~~P~~-R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (999)
..+.. ....+.++.++ .+|+..+......-..++.||..+....|+.-.
T Consensus 145 ~~~~~~~~~~~P~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 145 DPKVGSTLTQAPFVAKD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp CGGGTCBCCSCCEEETT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred CCCccceeccCCEEECC-EEEEEecCCccCCCCEEEEEECCCCcEEEEEcc
Confidence 11111 11223345565 777654321111235799999998887897643
No 67
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=95.12 E-value=2.5 Score=44.95 Aligned_cols=207 Identities=8% Similarity=0.032 Sum_probs=118.8
Q ss_pred cEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEE
Q 001895 178 HVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVW 257 (999)
Q Consensus 178 hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~ 257 (999)
.+....++.+|+..|..+ .+.+.++|+.+.. -..-. +++..-++.+++..++ +||+....+ +.++
T Consensus 46 qGL~~~~~~LyestG~~g----~S~v~~vD~~Tgk--v~~~~---~l~~~~FgeGit~~g~-~ly~ltw~~-----~~v~ 110 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNG----RSSIRKVDIESGK--TLQQI---ELGKRYFGEGISDWKD-KIVGLTWKN-----GLGF 110 (262)
T ss_dssp EEEEEETTEEEEEEEETT----EEEEEEECTTTCC--EEEEE---ECCTTCCEEEEEEETT-EEEEEESSS-----SEEE
T ss_pred ceEEEECCEEEEECCCCC----CceEEEEECCCCc--EEEEE---ecCCccceeEEEEeCC-EEEEEEeeC-----CEEE
Confidence 445556889999988632 2478999999863 32222 3444455677778877 899986543 5899
Q ss_pred EEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCC-cce
Q 001895 258 ALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSP-RYQ 336 (999)
Q Consensus 258 ~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~-R~~ 336 (999)
+||+.+.. .=..++..+ ...+++..+++||+.-| .+.++.+|+.+.....-+.+... +.+ +.-
T Consensus 111 v~D~~t~~-~~~ti~~~~-------eG~glt~dg~~L~~SdG-------s~~i~~iDp~T~~v~~~I~V~~~-g~~~~~l 174 (262)
T 3nol_A 111 VWNIRNLR-QVRSFNYDG-------EGWGLTHNDQYLIMSDG-------TPVLRFLDPESLTPVRTITVTAH-GEELPEL 174 (262)
T ss_dssp EEETTTCC-EEEEEECSS-------CCCCEEECSSCEEECCS-------SSEEEEECTTTCSEEEEEECEET-TEECCCE
T ss_pred EEECccCc-EEEEEECCC-------CceEEecCCCEEEEECC-------CCeEEEEcCCCCeEEEEEEeccC-Ccccccc
Confidence 99998862 112222211 22344455677888643 24578888876644444444321 111 111
Q ss_pred eEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccCcC-CCCCCCcccccCCCCCccCCCCcceeEEEEE-
Q 001895 337 HAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVT-SPRTGRYSADAAGGDAAVELTRRCRHAAAAV- 414 (999)
Q Consensus 337 hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~-~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~- 414 (999)
.-+...+++||+-- ...++|.+.|+++++-...-.+.. .+... ...+..-.-.+.+..
T Consensus 175 NELe~~~G~lyan~---------w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~-----------~~~~~~~vlNGIA~dp 234 (262)
T 3nol_A 175 NELEWVDGEIFANV---------WQTNKIVRIDPETGKVTGIIDLNGILAEAG-----------PLPSPIDVLNGIAWDK 234 (262)
T ss_dssp EEEEEETTEEEEEE---------TTSSEEEEECTTTCBEEEEEECTTGGGGSC-----------SCCSSCCCEEEEEEET
T ss_pred ceeEEECCEEEEEE---------ccCCeEEEEECCCCcEEEEEECCcCccccc-----------cccCcCCceEEEEEcC
Confidence 12445589988632 125789999999997544333210 00000 000112233556655
Q ss_pred -CCEEEEEcCCCCCcCcCcEEEeeccc
Q 001895 415 -GDLIFIYGGLRGGVLLDDLLVAEDLA 440 (999)
Q Consensus 415 -~~~LyV~GG~~~~~~l~Dv~~ld~~~ 440 (999)
+++|||.|-+ ...+|.+.+.+
T Consensus 235 ~~~~lfVTGK~-----Wp~~~ev~~~~ 256 (262)
T 3nol_A 235 EHHRLFVTGKL-----WPKVFEITLTQ 256 (262)
T ss_dssp TTTEEEEEETT-----CSEEEEEEEEE
T ss_pred CCCEEEEECCC-----CCceEEEEEec
Confidence 5799999853 56677766644
No 68
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=95.03 E-value=1.8 Score=47.61 Aligned_cols=178 Identities=16% Similarity=0.156 Sum_probs=92.8
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~ 227 (999)
+.++++|+.+++-....... ..-++++.. +..+|+.|+.+ ..+++||+.+.. ....-.. +
T Consensus 12 ~~v~v~d~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~d------~~i~v~d~~~~~--~~~~~~~-----~ 73 (391)
T 1l0q_A 12 DNISVIDVTSNKVTATIPVG-----SNPMGAVISPDGTKVYVANAHS------NDVSIIDTATNN--VIATVPA-----G 73 (391)
T ss_dssp TEEEEEETTTTEEEEEEECS-----SSEEEEEECTTSSEEEEEEGGG------TEEEEEETTTTE--EEEEEEC-----S
T ss_pred CEEEEEECCCCeEEEEeecC-----CCcceEEECCCCCEEEEECCCC------CeEEEEECCCCe--EEEEEEC-----C
Confidence 47899999988655443221 112333333 33677777542 579999998753 3222211 1
Q ss_pred CcccEEEEEC-CcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeC-CEEEEEeccCCCCC
Q 001895 228 RYGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSD-GLLLLCGGRDASSV 305 (999)
Q Consensus 228 R~~h~~~v~~-~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~-~~LyvfGG~~~~~~ 305 (999)
..-.+++... +.+||+.|..+ ..+.+||+.+. +......... .....+...+ ..+|+.++.+
T Consensus 74 ~~v~~~~~spdg~~l~~~~~~~-----~~v~v~d~~~~--~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~~~---- 137 (391)
T 1l0q_A 74 SSPQGVAVSPDGKQVYVTNMAS-----STLSVIDTTSN--TVAGTVKTGK-----SPLGLALSPDGKKLYVTNNGD---- 137 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTT-----TEEEEEETTTT--EEEEEEECSS-----SEEEEEECTTSSEEEEEETTT----
T ss_pred CCccceEECCCCCEEEEEECCC-----CEEEEEECCCC--eEEEEEeCCC-----CcceEEECCCCCEEEEEeCCC----
Confidence 1223343433 33566665443 46999999887 4433322221 1122222234 4566776543
Q ss_pred CcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE--CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEc
Q 001895 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (999)
Q Consensus 306 ~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~--~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v 378 (999)
..++.++..+. +..+....+. .-..+++. +..||+.++. .+.|.+||+.+.+....
T Consensus 138 --~~v~~~d~~~~-~~~~~~~~~~-----~~~~~~~~~dg~~l~~~~~~---------~~~v~~~d~~~~~~~~~ 195 (391)
T 1l0q_A 138 --KTVSVINTVTK-AVINTVSVGR-----SPKGIAVTPDGTKVYVANFD---------SMSISVIDTVTNSVIDT 195 (391)
T ss_dssp --TEEEEEETTTT-EEEEEEECCS-----SEEEEEECTTSSEEEEEETT---------TTEEEEEETTTTEEEEE
T ss_pred --CEEEEEECCCC-cEEEEEecCC-----CcceEEECCCCCEEEEEeCC---------CCEEEEEECCCCeEEEE
Confidence 24556665443 4333332221 11334443 3467777653 24599999998875543
No 69
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=94.95 E-value=2 Score=48.51 Aligned_cols=191 Identities=13% Similarity=0.025 Sum_probs=96.9
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
..++.+|+....-..+.... .. -.+.+.. +++.+++++.... ...++++|+.+.. ...+. ..+ .
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~----~~-v~~~~~Spdg~~la~~s~~~~---~~~i~~~d~~tg~--~~~l~---~~~--~ 223 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSP----QP-LMSPAWSPDGSKLAYVTFESG---RSALVIQTLANGA--VRQVA---SFP--R 223 (415)
T ss_dssp EEEEEEETTSCSCEEEEEES----SC-EEEEEECTTSSEEEEEECTTS---SCEEEEEETTTCC--EEEEE---CCS--S
T ss_pred ceEEEEcCCCCCCEEEeCCC----Cc-ceeeEEcCCCCEEEEEEecCC---CcEEEEEECCCCc--EEEee---cCC--C
Confidence 58899998876555553221 11 1122222 3455555553221 2589999998753 55443 111 1
Q ss_pred cccEEEEEC-CcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCc
Q 001895 229 YGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPL 307 (999)
Q Consensus 229 ~~h~~~v~~-~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~ 307 (999)
...+.+.-. +.+|++.+..++ ...+|.+|+.+. +...+..... .........+++.+++++.... .
T Consensus 224 ~~~~~~~spdg~~la~~~~~~g---~~~i~~~d~~~~--~~~~l~~~~~-----~~~~~~~spdg~~l~~~s~~~g---~ 290 (415)
T 2hqs_A 224 HNGAPAFSPDGSKLAFALSKTG---SLNLYVMDLASG--QIRQVTDGRS-----NNTEPTWFPDSQNLAFTSDQAG---R 290 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTS---SCEEEEEETTTC--CEEECCCCSS-----CEEEEEECTTSSEEEEEECTTS---S
T ss_pred cccCEEEcCCCCEEEEEEecCC---CceEEEEECCCC--CEEeCcCCCC-----cccceEECCCCCEEEEEECCCC---C
Confidence 222333333 334555554443 247999999887 6666543321 1222233346665566553221 2
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEccc
Q 001895 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKS 380 (999)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~ 380 (999)
..+|.++..+. . ...... ......+.++. +++.+++++.... ...|+++|+.+.+...+..
T Consensus 291 ~~i~~~d~~~~-~--~~~l~~---~~~~~~~~~~spdG~~l~~~~~~~g------~~~i~~~d~~~~~~~~l~~ 352 (415)
T 2hqs_A 291 PQVYKVNINGG-A--PQRITW---EGSQNQDADVSSDGKFMVMVSSNGG------QQHIAKQDLATGGVQVLSS 352 (415)
T ss_dssp CEEEEEETTSS-C--CEECCC---SSSEEEEEEECTTSSEEEEEEECSS------CEEEEEEETTTCCEEECCC
T ss_pred cEEEEEECCCC-C--EEEEec---CCCcccCeEECCCCCEEEEEECcCC------ceEEEEEECCCCCEEEecC
Confidence 35677766543 1 112211 12222233332 5665555554321 3469999999998876543
No 70
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=94.87 E-value=3.9 Score=43.58 Aligned_cols=209 Identities=10% Similarity=-0.014 Sum_probs=115.7
Q ss_pred cEEEEeC-CEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeE
Q 001895 178 HVATAVG-TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADV 256 (999)
Q Consensus 178 hsa~~~g-~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv 256 (999)
|..+..+ +.+|+..|... .+.+.++|+.+.. -...- +++....+.+++..++ +||+..-. -+.+
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~----~s~v~~iD~~tg~--v~~~i---~l~~~~fgeGi~~~g~-~lyv~t~~-----~~~v 88 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG----RSSVRQVALQTGK--VENIH---KMDDSYFGEGLTLLNE-KLYQVVWL-----KNIG 88 (266)
T ss_dssp EEEEECSTTEEEEEECSTT----TCEEEEEETTTCC--EEEEE---ECCTTCCEEEEEEETT-EEEEEETT-----CSEE
T ss_pred ccEEEeCCCeEEEECCCCC----CCEEEEEECCCCC--EEEEE---ecCCCcceEEEEEeCC-EEEEEEec-----CCEE
Confidence 6677666 69999877421 2679999999864 22222 2344445567777776 89998643 3579
Q ss_pred EEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCc-c
Q 001895 257 WALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPR-Y 335 (999)
Q Consensus 257 ~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R-~ 335 (999)
++||+.+....-+ ++. + .| ...+....++++|+.-| .+.++.+|+.+...-.-..+... +.+. .
T Consensus 89 ~viD~~t~~v~~~-i~~-g-~~----~g~glt~Dg~~l~vs~g-------s~~l~viD~~t~~v~~~I~Vg~~-~~p~~~ 153 (266)
T 2iwa_A 89 FIYDRRTLSNIKN-FTH-Q-MK----DGWGLATDGKILYGSDG-------TSILYEIDPHTFKLIKKHNVKYN-GHRVIR 153 (266)
T ss_dssp EEEETTTTEEEEE-EEC-C-SS----SCCEEEECSSSEEEECS-------SSEEEEECTTTCCEEEEEECEET-TEECCC
T ss_pred EEEECCCCcEEEE-EEC-C-CC----CeEEEEECCCEEEEECC-------CCeEEEEECCCCcEEEEEEECCC-Cccccc
Confidence 9999987622221 221 1 11 12334455678888643 34678888876533333333321 1111 1
Q ss_pred eeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccCcC-CCCCCCcccccCCCCCccCCCCcceeEEEEE
Q 001895 336 QHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVT-SPRTGRYSADAAGGDAAVELTRRCRHAAAAV 414 (999)
Q Consensus 336 ~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~-~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~ 414 (999)
-..+.+.++++|+--. ..++|.+.|+++++-...-.+.. .+.. . ....+..-.-.+++..
T Consensus 154 ~nele~~dg~lyvn~~---------~~~~V~vID~~tg~V~~~I~~~g~~~~~------~----~~~~~~~~v~nGIa~~ 214 (266)
T 2iwa_A 154 LNELEYINGEVWANIW---------QTDCIARISAKDGTLLGWILLPNLRKKL------I----DEGFRDIDVLNGIAWD 214 (266)
T ss_dssp EEEEEEETTEEEEEET---------TSSEEEEEETTTCCEEEEEECHHHHHHH------H----HTTCTTCCCEEEEEEE
T ss_pred ceeEEEECCEEEEecC---------CCCeEEEEECCCCcEEEEEECCCccccc------c----cccccccCceEEEEEc
Confidence 2234455888887532 15789999999986433222200 0000 0 0000011122555555
Q ss_pred --CCEEEEEcCCCCCcCcCcEEEeeccc
Q 001895 415 --GDLIFIYGGLRGGVLLDDLLVAEDLA 440 (999)
Q Consensus 415 --~~~LyV~GG~~~~~~l~Dv~~ld~~~ 440 (999)
++++||-|+.. +.++++++..
T Consensus 215 ~~~~~lfVTgk~~-----~~v~~i~l~~ 237 (266)
T 2iwa_A 215 QENKRIFVTGKLW-----PKLFEIKLHL 237 (266)
T ss_dssp TTTTEEEEEETTC-----SEEEEEEEEE
T ss_pred CCCCEEEEECCCC-----CeEEEEEEec
Confidence 56999999864 5566666554
No 71
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=94.42 E-value=6.3 Score=42.08 Aligned_cols=187 Identities=16% Similarity=0.096 Sum_probs=92.4
Q ss_pred CeEEEEECCCCcEEEecCCCCCCC-----CCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPT-----PRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG 222 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~-----pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g 222 (999)
+.++.||+.+.+-......+.... +..-+.++.. ++.+|+.+... ...+++||+.+... -..++.
T Consensus 111 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~~i~~~d~~~~~~-~~~~~~-- 182 (353)
T 3vgz_A 111 SAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK-----ESVIWVVDGGNIKL-KTAIQN-- 182 (353)
T ss_dssp TEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS-----SCEEEEEETTTTEE-EEEECC--
T ss_pred CEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC-----CceEEEEcCCCCce-EEEecC--
Confidence 478999998877433322211111 1112334443 45777776321 24699999987531 111210
Q ss_pred CCCCCCcccEEEEE-CCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEE-EEe-CCEEEEEec
Q 001895 223 PGPGPRYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATAS-ARS-DGLLLLCGG 299 (999)
Q Consensus 223 ~~P~~R~~h~~~v~-~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~-~~~-~~~LyvfGG 299 (999)
....-+.++.. ++++||+... + +.+++||+.+....|..... ...+ ......+ ... ++.+|+...
T Consensus 183 ---~~~~~~~~~~s~dg~~l~~~~~-~-----~~i~~~d~~~~~~~~~~~~~-~~~~--~~~~~~~~~s~dg~~l~~~~~ 250 (353)
T 3vgz_A 183 ---TGKMSTGLALDSEGKRLYTTNA-D-----GELITIDTADNKILSRKKLL-DDGK--EHFFINISLDTARQRAFITDS 250 (353)
T ss_dssp ---CCTTCCCCEEETTTTEEEEECT-T-----SEEEEEETTTTEEEEEEECC-CSSS--CCCEEEEEEETTTTEEEEEES
T ss_pred ---CCCccceEEECCCCCEEEEEcC-C-----CeEEEEECCCCeEEEEEEcC-CCCC--CcccceEEECCCCCEEEEEeC
Confidence 12222333343 3446776543 2 47889999887433433221 1111 1122222 222 455666542
Q ss_pred cCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE--CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEE
Q 001895 300 RDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (999)
Q Consensus 300 ~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~--~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~ 377 (999)
. ...++.++..+. +..+....+ .+ ..+++. ++.+|+.+.. .+.|.+||+.+.+...
T Consensus 251 ~------~~~v~~~d~~~~-~~~~~~~~~---~~---~~~~~s~dg~~l~v~~~~---------~~~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 251 K------AAEVLVVDTRNG-NILAKVAAP---ES---LAVLFNPARNEAYVTHRQ---------AGKVSVIDAKSYKVVK 308 (353)
T ss_dssp S------SSEEEEEETTTC-CEEEEEECS---SC---CCEEEETTTTEEEEEETT---------TTEEEEEETTTTEEEE
T ss_pred C------CCEEEEEECCCC-cEEEEEEcC---CC---ceEEECCCCCEEEEEECC---------CCeEEEEECCCCeEEE
Confidence 2 245677776544 333222222 12 223333 3468887542 3569999999987665
Q ss_pred c
Q 001895 378 T 378 (999)
Q Consensus 378 v 378 (999)
.
T Consensus 309 ~ 309 (353)
T 3vgz_A 309 T 309 (353)
T ss_dssp E
T ss_pred E
Confidence 4
No 72
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=94.42 E-value=1.8 Score=44.72 Aligned_cols=190 Identities=11% Similarity=0.047 Sum_probs=94.9
Q ss_pred ccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCC-CCCceEEEeecCCCC
Q 001895 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQ-QRPRWHRVVVQGPGP 225 (999)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t-~t~kW~~v~~~g~~P 225 (999)
....++++|+.+++...+.... ..-.+++.. +++.+++++. ..+++||+.+ .. ...+. ...
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~-----~~v~~~~~spdg~~l~~~~~-------~~i~~~d~~~~~~--~~~~~---~~~ 82 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTP-----ELFEAPNWSPDGKYLLLNSE-------GLLYRLSLAGDPS--PEKVD---TGF 82 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEES-----SCCEEEEECTTSSEEEEEET-------TEEEEEESSSCCS--CEECC---CTT
T ss_pred cceeEEEEeCCCCceeeeccCC-----cceEeeEECCCCCEEEEEcC-------CeEEEEeCCCCCC--ceEec---ccc
Confidence 5568999999998877664321 112223322 3455555542 4799999987 53 44432 112
Q ss_pred CCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCE-EEEEeccCCCC
Q 001895 226 GPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGL-LLLCGGRDASS 304 (999)
Q Consensus 226 ~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~-LyvfGG~~~~~ 304 (999)
....-..++...++..+++++.+.. ....+|.+|+.+. ....+.... . ........+++ |++.++.++
T Consensus 83 ~~~~~~~~~~spdg~~l~~~~~~~~-~~~~l~~~~~~~~--~~~~~~~~~-----~-~~~~~~spdg~~l~~~~~~~~-- 151 (297)
T 2ojh_A 83 ATICNNDHGISPDGALYAISDKVEF-GKSAIYLLPSTGG--TPRLMTKNL-----P-SYWHGWSPDGKSFTYCGIRDQ-- 151 (297)
T ss_dssp CCCBCSCCEECTTSSEEEEEECTTT-SSCEEEEEETTCC--CCEECCSSS-----S-EEEEEECTTSSEEEEEEEETT--
T ss_pred ccccccceEECCCCCEEEEEEeCCC-CcceEEEEECCCC--ceEEeecCC-----C-ccceEECCCCCEEEEEECCCC--
Confidence 1122223334334345555553322 3468999998776 444443321 1 12222333444 444454432
Q ss_pred CCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCE-EEEEcCcCCCCCCcccCCeEEEEECCCCeEEEccc
Q 001895 305 VPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NAR-LHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKS 380 (999)
Q Consensus 305 ~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~-L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~ 380 (999)
...+|.++.... . ....... ......+++. +++ |++.+..++ ...+|.+++.+.....+..
T Consensus 152 --~~~l~~~~~~~~-~--~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~~~-------~~~i~~~~~~~~~~~~~~~ 214 (297)
T 2ojh_A 152 --VFDIYSMDIDSG-V--ETRLTHG---EGRNDGPDYSPDGRWIYFNSSRTG-------QMQIWRVRVDGSSVERITD 214 (297)
T ss_dssp --EEEEEEEETTTC-C--EEECCCS---SSCEEEEEECTTSSEEEEEECTTS-------SCEEEEEETTSSCEEECCC
T ss_pred --ceEEEEEECCCC-c--ceEcccC---CCccccceECCCCCEEEEEecCCC-------CccEEEECCCCCCcEEEec
Confidence 235666665433 2 2222211 1112233332 454 444443322 3568999988877766543
No 73
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=94.33 E-value=0.019 Score=62.25 Aligned_cols=21 Identities=5% Similarity=0.267 Sum_probs=18.0
Q ss_pred HHHHHHHHHcCCcEEEEeccc
Q 001895 885 DRVMEFCNNNDLQLIVRAHEC 905 (999)
Q Consensus 885 ~~~~~fl~~~~l~~iiR~H~~ 905 (999)
+.+.+.++++++++++-||.=
T Consensus 203 ~~l~~~l~~~~v~~~l~GH~H 223 (313)
T 1ute_A 203 KQLLPLLTTHKVTAYLCGHDH 223 (313)
T ss_dssp HHTHHHHHHTTCSEEEECSSS
T ss_pred HHHHHHHHHcCCcEEEECChh
Confidence 567778999999999999974
No 74
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=94.27 E-value=3.5 Score=43.57 Aligned_cols=179 Identities=13% Similarity=0.085 Sum_probs=89.1
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcC-cEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAA-HVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~-hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~ 227 (999)
..+.+||+.+.++....... ..... .+++.. ++..++.|+.+ ..+.+||+.+.. ....- ... .
T Consensus 119 ~~i~~~d~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~d------g~v~~~d~~~~~--~~~~~---~~~-~ 183 (337)
T 1gxr_A 119 STLSIWDLAAPTPRIKAELT---SSAPACYALAISPDSKVCFSCCSD------GNIAVWDLHNQT--LVRQF---QGH-T 183 (337)
T ss_dssp SEEEEEECCCC--EEEEEEE---CSSSCEEEEEECTTSSEEEEEETT------SCEEEEETTTTE--EEEEE---CCC-S
T ss_pred CcEEEEECCCCCcceeeecc---cCCCceEEEEECCCCCEEEEEeCC------CcEEEEeCCCCc--eeeee---ecc-c
Confidence 47889999888754433221 11111 122222 34566666642 469999998742 22221 111 1
Q ss_pred CcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCc
Q 001895 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPL 307 (999)
Q Consensus 228 R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~ 307 (999)
..-.+++...++.+++.|+.++ .+..||+.+. +-........ .........++.++++|+.++
T Consensus 184 ~~i~~~~~~~~~~~l~~~~~dg-----~i~~~d~~~~--~~~~~~~~~~-----~v~~~~~s~~~~~l~~~~~~~----- 246 (337)
T 1gxr_A 184 DGASCIDISNDGTKLWTGGLDN-----TVRSWDLREG--RQLQQHDFTS-----QIFSLGYCPTGEWLAVGMESS----- 246 (337)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----EEEEEETTTT--EEEEEEECSS-----CEEEEEECTTSSEEEEEETTS-----
T ss_pred CceEEEEECCCCCEEEEEecCC-----cEEEEECCCC--ceEeeecCCC-----ceEEEEECCCCCEEEEEcCCC-----
Confidence 1222333333445677777654 6889999877 3322211111 122223334677777777543
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEE
Q 001895 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (999)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~ 376 (999)
.+..++........ ... ....-.++++. ++++++.|+.+ ..+.+||+.+.+-.
T Consensus 247 -~i~~~~~~~~~~~~---~~~---~~~~v~~~~~~~~~~~l~~~~~d---------g~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 247 -NVEVLHVNKPDKYQ---LHL---HESCVLSLKFAYCGKWFVSTGKD---------NLLNAWRTPYGASI 300 (337)
T ss_dssp -CEEEEETTSSCEEE---ECC---CSSCEEEEEECTTSSEEEEEETT---------SEEEEEETTTCCEE
T ss_pred -cEEEEECCCCCeEE---EcC---CccceeEEEECCCCCEEEEecCC---------CcEEEEECCCCeEE
Confidence 24455554442221 111 11122333333 46677777642 35889999887655
No 75
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=94.26 E-value=3 Score=45.74 Aligned_cols=178 Identities=16% Similarity=0.096 Sum_probs=90.5
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~ 227 (999)
+.++++|+.+++.......+ . .-.+++.. +..||+.|.. ...+++||+.+.. ...... ..
T Consensus 54 ~~i~v~d~~~~~~~~~~~~~---~--~v~~~~~spdg~~l~~~~~~------~~~v~v~d~~~~~--~~~~~~-----~~ 115 (391)
T 1l0q_A 54 NDVSIIDTATNNVIATVPAG---S--SPQGVAVSPDGKQVYVTNMA------SSTLSVIDTTSNT--VAGTVK-----TG 115 (391)
T ss_dssp TEEEEEETTTTEEEEEEECS---S--SEEEEEECTTSSEEEEEETT------TTEEEEEETTTTE--EEEEEE-----CS
T ss_pred CeEEEEECCCCeEEEEEECC---C--CccceEECCCCCEEEEEECC------CCEEEEEECCCCe--EEEEEe-----CC
Confidence 47899999988765543332 1 22233333 3466666543 2579999998853 322221 11
Q ss_pred CcccEEEEEC-CcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeC-CEEEEEeccCCCCC
Q 001895 228 RYGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSD-GLLLLCGGRDASSV 305 (999)
Q Consensus 228 R~~h~~~v~~-~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~-~~LyvfGG~~~~~~ 305 (999)
..-.+++... +..||+.++.++ .+++||+.+. +....-..... . ...+...+ +.||+.++.+
T Consensus 116 ~~~~~~~~s~dg~~l~~~~~~~~-----~v~~~d~~~~--~~~~~~~~~~~----~-~~~~~~~dg~~l~~~~~~~---- 179 (391)
T 1l0q_A 116 KSPLGLALSPDGKKLYVTNNGDK-----TVSVINTVTK--AVINTVSVGRS----P-KGIAVTPDGTKVYVANFDS---- 179 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTT-----EEEEEETTTT--EEEEEEECCSS----E-EEEEECTTSSEEEEEETTT----
T ss_pred CCcceEEECCCCCEEEEEeCCCC-----EEEEEECCCC--cEEEEEecCCC----c-ceEEECCCCCEEEEEeCCC----
Confidence 2223444433 336777776543 7999999887 54443332221 1 22222233 4666766543
Q ss_pred CcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CC-EEEEEcCcCCCCCCcccCCeEEEEECCCCeEE
Q 001895 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NA-RLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (999)
Q Consensus 306 ~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~-~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~ 376 (999)
..++.++..+. ........ ...-.++++. ++ .||+.+. .. ....|.+||+.+.+-.
T Consensus 180 --~~v~~~d~~~~-~~~~~~~~-----~~~~~~~~~~~~g~~l~~~~~-~~------~~~~v~~~d~~~~~~~ 237 (391)
T 1l0q_A 180 --MSISVIDTVTN-SVIDTVKV-----EAAPSGIAVNPEGTKAYVTNV-DK------YFNTVSMIDTGTNKIT 237 (391)
T ss_dssp --TEEEEEETTTT-EEEEEEEC-----SSEEEEEEECTTSSEEEEEEE-CS------SCCEEEEEETTTTEEE
T ss_pred --CEEEEEECCCC-eEEEEEec-----CCCccceEECCCCCEEEEEec-Cc------CCCcEEEEECCCCeEE
Confidence 23566665543 22222111 1112233333 34 4555442 11 1456999999988644
No 76
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=94.22 E-value=2.5 Score=45.02 Aligned_cols=181 Identities=10% Similarity=0.101 Sum_probs=96.1
Q ss_pred CeEEEEECCCCc--EEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCC
Q 001895 150 ADVHCYDVLTNK--WSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (999)
Q Consensus 150 ~dv~~yD~~t~~--W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~ 226 (999)
+.++.+|..+++ |+.-... ....|.+.+. ++.+|+.+ .+.++.||. +....|+.-. +.
T Consensus 15 ~~v~~~d~~tG~~~w~~~~~~-----~~~~~~~~~~pdG~ilvs~--------~~~V~~~d~-~G~~~W~~~~-----~~ 75 (276)
T 3no2_A 15 NKIAIINKDTKEIVWEYPLEK-----GWECNSVAATKAGEILFSY--------SKGAKMITR-DGRELWNIAA-----PA 75 (276)
T ss_dssp SEEEEEETTTTEEEEEEECCT-----TCCCCEEEECTTSCEEEEC--------BSEEEEECT-TSCEEEEEEC-----CT
T ss_pred CEEEEEECCCCeEEEEeCCCc-----cCCCcCeEECCCCCEEEeC--------CCCEEEECC-CCCEEEEEcC-----CC
Confidence 478899997775 7654321 1123444444 55777732 246999999 4444677543 22
Q ss_pred CCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCC-CCCCccceEEEEEeCCEEEEEeccCCCCC
Q 001895 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGE-GPPPCMYATASARSDGLLLLCGGRDASSV 305 (999)
Q Consensus 227 ~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~-~P~~r~~~~a~~~~~~~LyvfGG~~~~~~ 305 (999)
...-+++....++.+++....+ ...++.||... ...|+.-..... .+. ...+.+....++.+++....
T Consensus 76 ~~~~~~~~~~~dG~~lv~~~~~----~~~v~~vd~~G-k~l~~~~~~~~~~~~~-~~~~~v~~~~~G~~lv~~~~----- 144 (276)
T 3no2_A 76 GCEMQTARILPDGNALVAWCGH----PSTILEVNMKG-EVLSKTEFETGIERPH-AQFRQINKNKKGNYLVPLFA----- 144 (276)
T ss_dssp TCEEEEEEECTTSCEEEEEEST----TEEEEEECTTS-CEEEEEEECCSCSSGG-GSCSCCEECTTSCEEEEETT-----
T ss_pred CccccccEECCCCCEEEEecCC----CCEEEEEeCCC-CEEEEEeccCCCCccc-ccccCceECCCCCEEEEecC-----
Confidence 2234455555555566554321 23678888743 345654322111 110 01112233445666655432
Q ss_pred CcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCe--EEE
Q 001895 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGV--WCD 377 (999)
Q Consensus 306 ~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~--W~~ 377 (999)
...+..|+.. |+..|....+..| +++... ++.++|.+.. ...|..||+++++ |+.
T Consensus 145 -~~~v~~~d~~--G~~~w~~~~~~~~-----~~~~~~~~g~~~v~~~~---------~~~v~~~d~~tG~~~w~~ 202 (276)
T 3no2_A 145 -TSEVREIAPN--GQLLNSVKLSGTP-----FSSAFLDNGDCLVACGD---------AHCFVQLNLESNRIVRRV 202 (276)
T ss_dssp -TTEEEEECTT--SCEEEEEECSSCC-----CEEEECTTSCEEEECBT---------TSEEEEECTTTCCEEEEE
T ss_pred -CCEEEEECCC--CCEEEEEECCCCc-----cceeEcCCCCEEEEeCC---------CCeEEEEeCcCCcEEEEe
Confidence 2346777765 5555655443211 334444 6788887653 2348999999664 554
No 77
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=94.02 E-value=0.057 Score=61.93 Aligned_cols=69 Identities=19% Similarity=0.155 Sum_probs=42.2
Q ss_pred CeEEEecCCCCHHHHHHHHHHhCCC--CCCCCccceeEEEeccccCCCCC------hH-HHHHHHHHhhhcCCCCEEEec
Q 001895 699 PIKIFGDLHGQFGDLMRLFDEYGSP--STAGDIAYIDYLFLGDYVDRGQH------SL-ETITLLLALKVEYPNNVHLIR 769 (999)
Q Consensus 699 ~i~vvGDiHG~~~~L~~il~~~g~~--~~~~~~~~~~~vfLGDyVDRG~~------s~-evl~ll~~lk~~~P~~v~llr 769 (999)
+++++||+|....... +++.+... ..+ -+|++||+++.+.. .. +...+|-.+.... -++.+.
T Consensus 121 ~f~~igD~~~~~~~~~-~l~~~~~~~~~~D------~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~~~--P~~~v~ 191 (424)
T 2qfp_A 121 TFGLIGDLGQSFDSNT-TLSHYELSPKKGQ------TVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQ--PWIWTA 191 (424)
T ss_dssp EEEEECSCTTBHHHHH-HHHHHHTCSSCCC------EEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHTTS--CEEECC
T ss_pred EEEEEEeCCCCCChHH-HHHHHHhCCCCCC------EEEEcCccccccccccccchHHHHHHHHHHHHHhcC--CeEeec
Confidence 4899999998875442 34433211 111 57889999986432 11 2233444444333 499999
Q ss_pred CCccccc
Q 001895 770 GNHEAAD 776 (999)
Q Consensus 770 GNHE~~~ 776 (999)
||||...
T Consensus 192 GNHD~~~ 198 (424)
T 2qfp_A 192 GNHEIEF 198 (424)
T ss_dssp CHHHHCC
T ss_pred CCccccc
Confidence 9999863
No 78
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=93.96 E-value=11 Score=45.58 Aligned_cols=113 Identities=12% Similarity=0.048 Sum_probs=65.3
Q ss_pred eEEEEECCCCc--EEEecCCCCCCC-----CCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCC
Q 001895 151 DVHCYDVLTNK--WSRITPFGEPPT-----PRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGP 223 (999)
Q Consensus 151 dv~~yD~~t~~--W~~l~~~g~~P~-----pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~ 223 (999)
.++.+|..+++ |+.-........ .....+.++.+++||+... ...++.||..+....|+.-.....
T Consensus 81 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-------dg~l~AlDa~TG~~~W~~~~~~~~ 153 (689)
T 1yiq_A 81 VVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-------DGRLEAIDAKTGQRAWSVDTRADH 153 (689)
T ss_dssp CEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECCSCT
T ss_pred eEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc-------CCEEEEEECCCCCEeeeecCcCCC
Confidence 68999998765 886433210000 0112234566788887653 257999999887777987642011
Q ss_pred CCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEc
Q 001895 224 GPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKL 271 (999)
Q Consensus 224 ~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v 271 (999)
........+.++.++ .+|+..+......-..++.||..+....|+.-
T Consensus 154 ~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 154 KRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp TSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 111122223345666 67664322111234579999999987789864
No 79
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=93.95 E-value=3 Score=49.91 Aligned_cols=113 Identities=8% Similarity=0.040 Sum_probs=63.0
Q ss_pred eEEEEEC-CCCc--EEEecCCCCC--CCC---CcCcEEEE--eCCE----EEEEcccCCCCCCcCcEEEEecCCCCCceE
Q 001895 151 DVHCYDV-LTNK--WSRITPFGEP--PTP---RAAHVATA--VGTM----VVIQGGIGPAGLSAEDLHVLDLTQQRPRWH 216 (999)
Q Consensus 151 dv~~yD~-~t~~--W~~l~~~g~~--P~p---R~~hsa~~--~g~~----iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~ 216 (999)
.+++||. .+.+ |+.-...... +.. ....+.++ .+++ ||+... ...++.+|..+....|+
T Consensus 74 ~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~-------dg~l~AlDa~TG~~~W~ 146 (599)
T 1w6s_A 74 NTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL-------DGNVAALNAETGETVWK 146 (599)
T ss_dssp CEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT-------TSEEEEEETTTCCEEEE
T ss_pred EEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC-------CCEEEEEECCCCCEEEe
Confidence 6899999 7764 8875432100 000 11223444 5666 776533 24799999988777798
Q ss_pred EEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcc
Q 001895 217 RVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (999)
Q Consensus 217 ~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (999)
.-... ..+......+-++.++ .+|+..+......-..++.||..+....|+.-.
T Consensus 147 ~~~~~-~~~~~~~~ssP~v~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 147 VENSD-IKVGSTLTIAPYVVKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp EECCC-GGGTCBCCSCCEEETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred ecCCC-CCccceeecCCEEECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 64311 0000111223345565 676643221111245799999999877898753
No 80
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=93.71 E-value=11 Score=45.41 Aligned_cols=113 Identities=16% Similarity=0.139 Sum_probs=65.8
Q ss_pred eEEEEECCCCc--EEEecCCCCC-----CCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCC
Q 001895 151 DVHCYDVLTNK--WSRITPFGEP-----PTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGP 223 (999)
Q Consensus 151 dv~~yD~~t~~--W~~l~~~g~~-----P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~ 223 (999)
.++.+|..+++ |+.-...... .......+.++.+++||+... ...++.||..+....|+.-... .
T Consensus 77 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------dg~l~alD~~tG~~~W~~~~~~-~ 148 (668)
T 1kv9_A 77 RVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL-------DGRLIALDAKTGKAIWSQQTTD-P 148 (668)
T ss_dssp EEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT-------TSEEEEEETTTCCEEEEEECSC-T
T ss_pred eEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC-------CCEEEEEECCCCCEeeeeccCC-C
Confidence 68899988765 8864332100 000112334566788887643 2579999999877789875411 1
Q ss_pred CCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcc
Q 001895 224 GPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (999)
Q Consensus 224 ~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (999)
........+.++.++ .+|+..+......-..++.||..+....|+.-.
T Consensus 149 ~~~~~~~~~P~v~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 149 AKPYSITGAPRVVKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp TSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCcceecCCCEEECC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 111122233345565 676643321112345799999999888898753
No 81
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=93.55 E-value=7.1 Score=43.77 Aligned_cols=176 Identities=15% Similarity=0.113 Sum_probs=86.7
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCc
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~ 229 (999)
+.+.+||..+.+-...-.. ....-.+...++.+++.|+.+ ..+.+||+.+.. -...- .....
T Consensus 153 g~i~iwd~~~~~~~~~~~~-----h~~~v~~l~~~~~~l~sg~~d------g~i~vwd~~~~~--~~~~~-----~~h~~ 214 (435)
T 1p22_A 153 NTIKIWDKNTLECKRILTG-----HTGSVLCLQYDERVIITGSSD------STVRVWDVNTGE--MLNTL-----IHHCE 214 (435)
T ss_dssp SCEEEEESSSCCEEEEECC-----CSSCEEEEECCSSEEEEEETT------SCEEEEESSSCC--EEEEE-----CCCCS
T ss_pred CeEEEEeCCCCeEEEEEcC-----CCCcEEEEEECCCEEEEEcCC------CeEEEEECCCCc--EEEEE-----cCCCC
Confidence 3788899887764433221 111223344466777777643 579999998753 22211 11122
Q ss_pred ccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCccc
Q 001895 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLAS 309 (999)
Q Consensus 230 ~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d 309 (999)
.-..+.+.+ .+++.|+.++ .+..||+.+...........+. .....++.. ++..++.|+.++ .
T Consensus 215 ~v~~l~~~~-~~l~s~s~dg-----~i~vwd~~~~~~~~~~~~~~~~----~~~v~~~~~-~~~~l~s~~~dg------~ 277 (435)
T 1p22_A 215 AVLHLRFNN-GMMVTCSKDR-----SIAVWDMASPTDITLRRVLVGH----RAAVNVVDF-DDKYIVSASGDR------T 277 (435)
T ss_dssp CEEEEECCT-TEEEEEETTS-----CEEEEECSSSSCCEEEEEECCC----SSCEEEEEE-ETTEEEEEETTS------E
T ss_pred cEEEEEEcC-CEEEEeeCCC-----cEEEEeCCCCCCceeeeEecCC----CCcEEEEEe-CCCEEEEEeCCC------e
Confidence 223334455 4777777765 5788888765211111111111 112223333 555666666543 2
Q ss_pred EEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeE
Q 001895 310 AYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (999)
Q Consensus 310 ~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W 375 (999)
+..++..+. .-..... + ... ...++..++.+++.|+.+ +.|.+||+.+++-
T Consensus 278 i~vwd~~~~-~~~~~~~-~---~~~-~v~~~~~~~~~l~~g~~d---------g~i~iwd~~~~~~ 328 (435)
T 1p22_A 278 IKVWNTSTC-EFVRTLN-G---HKR-GIACLQYRDRLVVSGSSD---------NTIRLWDIECGAC 328 (435)
T ss_dssp EEEEETTTC-CEEEEEE-C---CSS-CEEEEEEETTEEEEEETT---------SCEEEEETTTCCE
T ss_pred EEEEECCcC-cEEEEEc-C---CCC-cEEEEEeCCCEEEEEeCC---------CeEEEEECCCCCE
Confidence 344444332 1111111 1 111 122333456677777753 3488999988753
No 82
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=93.55 E-value=8.4 Score=42.59 Aligned_cols=190 Identities=14% Similarity=0.096 Sum_probs=90.3
Q ss_pred ccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCC
Q 001895 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (999)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~ 227 (999)
....+.+||+.+.+....-.. ....-.....++.+++.|+.+ ..+.+||+......-..+. + ..
T Consensus 154 ~dg~i~iwd~~~~~~~~~~~~-----~~~~v~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~--~---~~ 217 (401)
T 4aez_A 154 GNGLVDIYDVESQTKLRTMAG-----HQARVGCLSWNRHVLSSGSRS------GAIHHHDVRIANHQIGTLQ--G---HS 217 (401)
T ss_dssp TTSCEEEEETTTCCEEEEECC-----CSSCEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEE--C---CS
T ss_pred CCCeEEEEECcCCeEEEEecC-----CCCceEEEEECCCEEEEEcCC------CCEEEEecccCcceeeEEc--C---CC
Confidence 345788899887764433221 111222333355566666642 5789999985321122221 1 11
Q ss_pred CcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCc
Q 001895 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPL 307 (999)
Q Consensus 228 R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~ 307 (999)
..-.+++...++.+++.|+.++ .+..||+.+....+...... . .....+..-.+..+++.||...+
T Consensus 218 ~~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~~~~~~~~~~~-~----~v~~~~~~p~~~~ll~~~~gs~d---- 283 (401)
T 4aez_A 218 SEVCGLAWRSDGLQLASGGNDN-----VVQIWDARSSIPKFTKTNHN-A----AVKAVAWCPWQSNLLATGGGTMD---- 283 (401)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEETTCSSEEEEECCCS-S----CCCEEEECTTSTTEEEEECCTTT----
T ss_pred CCeeEEEEcCCCCEEEEEeCCC-----eEEEccCCCCCccEEecCCc-c----eEEEEEECCCCCCEEEEecCCCC----
Confidence 1122333333446777888765 68889998763333322111 1 11122222224567777652211
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CC-EEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccC
Q 001895 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NA-RLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (999)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~-~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~ 381 (999)
..+..++..+. ........ ...-.++++. ++ .|++.+|.. .+.|.+||..+.....+..+
T Consensus 284 ~~i~i~d~~~~-~~~~~~~~-----~~~v~~~~~s~~~~~l~~~~g~~--------dg~i~v~~~~~~~~~~~~~~ 345 (401)
T 4aez_A 284 KQIHFWNAATG-ARVNTVDA-----GSQVTSLIWSPHSKEIMSTHGFP--------DNNLSIWSYSSSGLTKQVDI 345 (401)
T ss_dssp CEEEEEETTTC-CEEEEEEC-----SSCEEEEEECSSSSEEEEEECTT--------TCEEEEEEEETTEEEEEEEE
T ss_pred CEEEEEECCCC-CEEEEEeC-----CCcEEEEEECCCCCeEEEEeecC--------CCcEEEEecCCccceeEEEe
Confidence 23445554433 22222111 1112233332 33 455544432 24588999988877765443
No 83
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=93.17 E-value=6.5 Score=41.77 Aligned_cols=187 Identities=10% Similarity=0.054 Sum_probs=91.5
Q ss_pred ccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCC
Q 001895 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (999)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P 225 (999)
..+.+..||+.+++.......+ .....++.. ++.+|+.+.. .+.+++||+.+....-..+. .+..|
T Consensus 18 ~~~~v~~~d~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~------~~~i~~~d~~~~~~~~~~~~-~~~~~ 85 (331)
T 3u4y_A 18 HLRRISFFSTDTLEILNQITLG-----YDFVDTAITSDCSNVVVTSDF------CQTLVQIETQLEPPKVVAIQ-EGQSS 85 (331)
T ss_dssp GGTEEEEEETTTCCEEEEEECC-----CCEEEEEECSSSCEEEEEEST------TCEEEEEECSSSSCEEEEEE-ECSSC
T ss_pred CCCeEEEEeCcccceeeeEEcc-----CCcceEEEcCCCCEEEEEeCC------CCeEEEEECCCCceeEEecc-cCCCC
Confidence 3458999999999887665432 111133332 3357776652 24899999988642122222 22222
Q ss_pred CCCcccEEEEE-CCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCC-EEEEEeccCCC
Q 001895 226 GPRYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDG-LLLLCGGRDAS 303 (999)
Q Consensus 226 ~~R~~h~~~v~-~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~-~LyvfGG~~~~ 303 (999)
.++++.. ++.+|| .+..++ ....+++||+.+. +....-.... ..+..+...++ .+|+.+..+..
T Consensus 86 ----~~~~~~s~dg~~l~-~~~~~~--~~~~i~v~d~~~~--~~~~~~~~~~-----~~~~~~~spdg~~l~~~~~~~~~ 151 (331)
T 3u4y_A 86 ----MADVDITPDDQFAV-TVTGLN--HPFNMQSYSFLKN--KFISTIPIPY-----DAVGIAISPNGNGLILIDRSSAN 151 (331)
T ss_dssp ----CCCEEECTTSSEEE-ECCCSS--SSCEEEEEETTTT--EEEEEEECCT-----TEEEEEECTTSSCEEEEEETTTT
T ss_pred ----ccceEECCCCCEEE-EecCCC--CcccEEEEECCCC--CeEEEEECCC-----CccceEECCCCCEEEEEecCCCc
Confidence 2323333 333566 332221 1237999999887 5544333322 12333334455 47766543221
Q ss_pred CCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CC-EEEEEcCcCCCCCCcccCCeEEEEECCCCeE
Q 001895 304 SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NA-RLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (999)
Q Consensus 304 ~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~-~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W 375 (999)
.++.|+...++...... ....+....-..+++. ++ .+|+.+.. .+.|.+||+.+.+.
T Consensus 152 -----~i~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~spdg~~l~v~~~~---------~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 152 -----TVRRFKIDADGVLFDTG-QEFISGGTRPFNITFTPDGNFAFVANLI---------GNSIGILETQNPEN 210 (331)
T ss_dssp -----EEEEEEECTTCCEEEEE-EEEECSSSSEEEEEECTTSSEEEEEETT---------TTEEEEEECSSTTS
T ss_pred -----eEEEEEECCCCcEeecC-CccccCCCCccceEECCCCCEEEEEeCC---------CCeEEEEECCCCcc
Confidence 03333333333222111 0000112222334443 34 57776532 35699999988775
No 84
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=93.16 E-value=4.5 Score=44.97 Aligned_cols=194 Identities=10% Similarity=-0.021 Sum_probs=94.2
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCc
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~ 229 (999)
.+|.+|+.+..+..+.... ....-++++.. ++.+++.++.+ ..+++||+.+.. .......+.......
T Consensus 102 ~l~~~d~~~~~~~~~~~~~---~~~~~~~~~~s~~~~~~~~~~~~------~~i~~~d~~~g~--~~~~~~~~~~~~~~~ 170 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFK---TGFQPKSVRFIDNTRLAIPLLED------EGMDVLDINSGQ--TVRLSPPEKYKKKLG 170 (433)
T ss_dssp CEEECCBTTCSEEEEEEEE---CSSCBCCCEESSSSEEEEEBTTS------SSEEEEETTTCC--EEEECCCHHHHTTCC
T ss_pred EEEEECCCCCcceEEEEEc---CCCCceEEEEeCCCeEEEEeCCC------CeEEEEECCCCe--EeeecCcccccccCC
Confidence 7888888777665554321 11112233333 56788777642 469999998753 433221101111111
Q ss_pred c-cEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcc
Q 001895 230 G-HVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (999)
Q Consensus 230 ~-h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~ 308 (999)
. .+++.-.++.+|+.|+.++ .+.+||+.+....++.. .... .....+..-.+..+|+.++.++
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d~-----~v~~~d~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~l~~~~~~~~------ 234 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQAN-----AVHVFDLKTLAYKATVD-LTGK----WSKILLYDPIRDLVYCSNWISE------ 234 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGGT-----EEEEEETTTCCEEEEEE-CSSS----SEEEEEEETTTTEEEEEETTTT------
T ss_pred ceeEEEEcCCCEEEEEECCCC-----EEEEEECCCceEEEEEc-CCCC----CeeEEEEcCCCCEEEEEecCCC------
Confidence 1 2233333447888877554 68999998763333332 1111 1112222222456666665432
Q ss_pred cEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEc
Q 001895 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (999)
Q Consensus 309 d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v 378 (999)
.++.++..+. +..+... ....-.++++. +++.+++++...... ......|++||+.+.+-...
T Consensus 235 ~i~~~d~~~~-~~~~~~~-----~~~~~~~~~~~~~g~~l~~~~~~~~~~-~~~dg~i~~~d~~~~~~~~~ 298 (433)
T 3bws_A 235 DISVIDRKTK-LEIRKTD-----KIGLPRGLLLSKDGKELYIAQFSASNQ-ESGGGRLGIYSMDKEKLIDT 298 (433)
T ss_dssp EEEEEETTTT-EEEEECC-----CCSEEEEEEECTTSSEEEEEEEESCTT-CSCCEEEEEEETTTTEEEEE
T ss_pred cEEEEECCCC-cEEEEec-----CCCCceEEEEcCCCCEEEEEECCCCcc-ccCCCeEEEEECCCCcEEee
Confidence 4566665543 3332211 11122334443 454444544322211 00135799999998865443
No 85
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=93.10 E-value=13 Score=41.45 Aligned_cols=180 Identities=11% Similarity=0.043 Sum_probs=88.2
Q ss_pred ccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCC
Q 001895 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (999)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~ 227 (999)
....+..||+.+.+-...-.. ....-.+...++..++.|+.+ ..+.+||+.+.. .+.. +...
T Consensus 217 ~dg~i~~wd~~~~~~~~~~~~-----~~~~v~~~~~~~~~l~~~~~d------g~i~iwd~~~~~----~~~~---~~~~ 278 (445)
T 2ovr_B 217 RDATLRVWDIETGQCLHVLMG-----HVAAVRCVQYDGRRVVSGAYD------FMVKVWDPETET----CLHT---LQGH 278 (445)
T ss_dssp TTSEEEEEESSSCCEEEEEEC-----CSSCEEEEEECSSCEEEEETT------SCEEEEEGGGTE----EEEE---ECCC
T ss_pred CCCEEEEEECCCCcEEEEEcC-----CcccEEEEEECCCEEEEEcCC------CEEEEEECCCCc----EeEE---ecCC
Confidence 345677788776653322111 111222333455566666642 568999987742 2221 1111
Q ss_pred CcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCc
Q 001895 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPL 307 (999)
Q Consensus 228 R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~ 307 (999)
...-..+.+++ ..++.|+.++ .+..||+.+....++.... .....+... ++.+++.|+.++
T Consensus 279 ~~~v~~~~~~~-~~l~~~~~d~-----~i~i~d~~~~~~~~~~~~~-------~~~v~~~~~-~~~~l~~~~~dg----- 339 (445)
T 2ovr_B 279 TNRVYSLQFDG-IHVVSGSLDT-----SIRVWDVETGNCIHTLTGH-------QSLTSGMEL-KDNILVSGNADS----- 339 (445)
T ss_dssp SSCEEEEEECS-SEEEEEETTS-----CEEEEETTTCCEEEEECCC-------CSCEEEEEE-ETTEEEEEETTS-----
T ss_pred CCceEEEEECC-CEEEEEeCCC-----eEEEEECCCCCEEEEEcCC-------cccEEEEEE-eCCEEEEEeCCC-----
Confidence 12222333455 5667777665 5888999877323322111 111222333 445666676543
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEE
Q 001895 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (999)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~ 377 (999)
.+..++..+. +-........ .....-.++..++.+++.|+.+ ..|.+||+.+++...
T Consensus 340 -~i~vwd~~~~-~~~~~~~~~~--~~~~~v~~~~~~~~~l~s~~~d---------g~v~iwd~~~~~~~~ 396 (445)
T 2ovr_B 340 -TVKIWDIKTG-QCLQTLQGPN--KHQSAVTCLQFNKNFVITSSDD---------GTVKLWDLKTGEFIR 396 (445)
T ss_dssp -CEEEEETTTC-CEEEEECSTT--SCSSCEEEEEECSSEEEEEETT---------SEEEEEETTTCCEEE
T ss_pred -eEEEEECCCC-cEEEEEccCC--CCCCCEEEEEECCCEEEEEeCC---------CeEEEEECCCCceee
Confidence 2344444332 2222221111 1112223344467777777753 358899999887654
No 86
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=93.10 E-value=0.094 Score=60.18 Aligned_cols=69 Identities=16% Similarity=0.158 Sum_probs=40.4
Q ss_pred CeEEEecCCCCHHHHHHHHHHhC-CC-CCCCCccceeEEEeccccCCCCC-----h-HH-HHHHHHHhhhcCCCCEEEec
Q 001895 699 PIKIFGDLHGQFGDLMRLFDEYG-SP-STAGDIAYIDYLFLGDYVDRGQH-----S-LE-TITLLLALKVEYPNNVHLIR 769 (999)
Q Consensus 699 ~i~vvGDiHG~~~~L~~il~~~g-~~-~~~~~~~~~~~vfLGDyVDRG~~-----s-~e-vl~ll~~lk~~~P~~v~llr 769 (999)
+++++||+|..... .+.++.+. .+ ..+ -+|++||+++.+.. . .+ ...+|-.+.... -++.+.
T Consensus 128 ~f~~~gD~~~~~~~-~~~l~~i~~~~~~~D------~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~~~--P~~~v~ 198 (426)
T 1xzw_A 128 VFGLIGDIGQTHDS-NTTLTHYEQNSAKGQ------AVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQ--PWIWTA 198 (426)
T ss_dssp EEEEECSCTTBHHH-HHHHHHHHHCTTCCS------EEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTS--CEECCC
T ss_pred EEEEEEeCCCCCch-HHHHHHHHhCCCCCC------EEEeCCChhhcccCCcccchHHHHHHHHHHHHHhcC--CEEEec
Confidence 48899999987532 22233221 11 111 58889999975322 1 11 233444444333 499999
Q ss_pred CCccccc
Q 001895 770 GNHEAAD 776 (999)
Q Consensus 770 GNHE~~~ 776 (999)
||||...
T Consensus 199 GNHD~~~ 205 (426)
T 1xzw_A 199 GNHEIDY 205 (426)
T ss_dssp CGGGCCC
T ss_pred ccccccc
Confidence 9999864
No 87
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=93.05 E-value=5.8 Score=42.19 Aligned_cols=156 Identities=14% Similarity=0.049 Sum_probs=95.6
Q ss_pred cEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEE
Q 001895 178 HVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVW 257 (999)
Q Consensus 178 hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~ 257 (999)
++....++.||+..|.. ..+.++|+.+....-+. ++..-++.+++..++ +||+....+ +.++
T Consensus 58 qGL~~~~~~Ly~stG~~------g~v~~iD~~Tgkv~~~~------l~~~~FgeGit~~g~-~Ly~ltw~~-----~~v~ 119 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQ------GTLRQLSLESAQPVWME------RLGNIFAEGLASDGE-RLYQLTWTE-----GLLF 119 (268)
T ss_dssp EEEEEETTEEEEEETTT------TEEEECCSSCSSCSEEE------ECTTCCEEEEEECSS-CEEEEESSS-----CEEE
T ss_pred ceEEEECCEEEEEcCCC------CEEEEEECCCCcEEeEE------CCCCcceeEEEEeCC-EEEEEEccC-----CEEE
Confidence 45666688999999863 23899999986422222 233445666777776 899986543 5899
Q ss_pred EEECCCCCceEEE-cccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCc-c
Q 001895 258 ALDTAAKPYEWRK-LEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPR-Y 335 (999)
Q Consensus 258 ~yDl~s~~~~W~~-v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R-~ 335 (999)
+||+.+. +-.. ++..+ ...+++..+++||+.-| .+.++.+|+.+...-.-+.+... +.+. .
T Consensus 120 V~D~~Tl--~~~~ti~~~~-------eGwGLt~Dg~~L~vSdG-------s~~l~~iDp~T~~v~~~I~V~~~-g~~v~~ 182 (268)
T 3nok_A 120 TWSGMPP--QRERTTRYSG-------EGWGLCYWNGKLVRSDG-------GTMLTFHEPDGFALVGAVQVKLR-GQPVEL 182 (268)
T ss_dssp EEETTTT--EEEEEEECSS-------CCCCEEEETTEEEEECS-------SSEEEEECTTTCCEEEEEECEET-TEECCC
T ss_pred EEECCcC--cEEEEEeCCC-------ceeEEecCCCEEEEECC-------CCEEEEEcCCCCeEEEEEEeCCC-Cccccc
Confidence 9999887 3322 22211 12344456788999754 23577788776644444444321 1221 1
Q ss_pred eeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEE
Q 001895 336 QHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (999)
Q Consensus 336 ~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~ 377 (999)
-.-+...+++||+-- ...++|.+.|+++++-..
T Consensus 183 lNeLe~~dG~lyanv---------w~s~~I~vIDp~TG~V~~ 215 (268)
T 3nok_A 183 INELECANGVIYANI---------WHSSDVLEIDPATGTVVG 215 (268)
T ss_dssp EEEEEEETTEEEEEE---------TTCSEEEEECTTTCBEEE
T ss_pred ccccEEeCCEEEEEE---------CCCCeEEEEeCCCCcEEE
Confidence 123455688988631 125789999999996443
No 88
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=92.91 E-value=11 Score=40.05 Aligned_cols=193 Identities=10% Similarity=0.023 Sum_probs=96.4
Q ss_pred cCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCC
Q 001895 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (999)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~ 226 (999)
.+.++.+|+.+.+.......+. ..++.+.. ++.+|+.++. .+.+++||+.+....+. +.. +....
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~v~~~~------~~~v~~~d~~~~~~~~~-~~~-~~~~~ 134 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDL-----KPFGATINNTTQTLWFGNTV------NSAVTAIDAKTGEVKGR-LVL-DDRKR 134 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-----CCCSEEEETTTTEEEEEETT------TTEEEEEETTTCCEEEE-EES-CCCCC
T ss_pred CccEEEEcCCCCeEEEEEecCC-----CcceEEECCCCCEEEEEecC------CCEEEEEeCCCCeeEEE-Eec-CCCcc
Confidence 4579999999887544433221 12333433 3467777653 24799999988642222 221 11111
Q ss_pred -----CCcccEEEEE-CCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEecc
Q 001895 227 -----PRYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 300 (999)
Q Consensus 227 -----~R~~h~~~v~-~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~ 300 (999)
+..-+.+++. +++++|+.+..+ -..+++||+.+....+.. ...+.. ....+..-.++.+|+...
T Consensus 135 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~----~~~i~~~d~~~~~~~~~~-~~~~~~----~~~~~~s~dg~~l~~~~~- 204 (353)
T 3vgz_A 135 TEEVRPLQPRELVADDATNTVYISGIGK----ESVIWVVDGGNIKLKTAI-QNTGKM----STGLALDSEGKRLYTTNA- 204 (353)
T ss_dssp CSSCCCCEEEEEEEETTTTEEEEEEESS----SCEEEEEETTTTEEEEEE-CCCCTT----CCCCEEETTTTEEEEECT-
T ss_pred ccccCCCCCceEEECCCCCEEEEEecCC----CceEEEEcCCCCceEEEe-cCCCCc----cceEEECCCCCEEEEEcC-
Confidence 1112334443 334677776322 246999999887333332 212211 122222223455666532
Q ss_pred CCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE--CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEc
Q 001895 301 DASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (999)
Q Consensus 301 ~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~--~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v 378 (999)
...++.++..+. +-.+....+.........++++. ++.+|+.... .+.|++||+.+.+....
T Consensus 205 ------~~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~---------~~~v~~~d~~~~~~~~~ 268 (353)
T 3vgz_A 205 ------DGELITIDTADN-KILSRKKLLDDGKEHFFINISLDTARQRAFITDSK---------AAEVLVVDTRNGNILAK 268 (353)
T ss_dssp ------TSEEEEEETTTT-EEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS---------SSEEEEEETTTCCEEEE
T ss_pred ------CCeEEEEECCCC-eEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC---------CCEEEEEECCCCcEEEE
Confidence 134566666543 33333322211112222334444 4567776532 35699999998876544
Q ss_pred cc
Q 001895 379 KS 380 (999)
Q Consensus 379 ~~ 380 (999)
-.
T Consensus 269 ~~ 270 (353)
T 3vgz_A 269 VA 270 (353)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 89
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=92.62 E-value=4 Score=46.01 Aligned_cols=191 Identities=10% Similarity=0.105 Sum_probs=99.1
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CC-EEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GT-MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~-~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~ 227 (999)
..++++|+.+++...+.... ....+.+.. ++ .|++.+... ....+|++|+.+.. ...+. .. .
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~-----~~~~~~~~spdg~~la~~~~~~----g~~~i~~~d~~~~~--~~~l~---~~--~ 266 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFP-----RHNGAPAFSPDGSKLAFALSKT----GSLNLYVMDLASGQ--IRQVT---DG--R 266 (415)
T ss_dssp CEEEEEETTTCCEEEEECCS-----SCEEEEEECTTSSEEEEEECTT----SSCEEEEEETTTCC--EEECC---CC--S
T ss_pred cEEEEEECCCCcEEEeecCC-----CcccCEEEcCCCCEEEEEEecC----CCceEEEEECCCCC--EEeCc---CC--C
Confidence 48999999998887765431 111222222 33 555554432 12479999998753 44443 11 1
Q ss_pred CcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCc
Q 001895 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPL 307 (999)
Q Consensus 228 R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~ 307 (999)
......+...+++.+++++..+ ....+|.+|+.+. +-..+.... ..........+++.+++++.+.. .
T Consensus 267 ~~~~~~~~spdg~~l~~~s~~~--g~~~i~~~d~~~~--~~~~l~~~~-----~~~~~~~~spdG~~l~~~~~~~g---~ 334 (415)
T 2hqs_A 267 SNNTEPTWFPDSQNLAFTSDQA--GRPQVYKVNINGG--APQRITWEG-----SQNQDADVSSDGKFMVMVSSNGG---Q 334 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTT--SSCEEEEEETTSS--CCEECCCSS-----SEEEEEEECTTSSEEEEEEECSS---C
T ss_pred CcccceEECCCCCEEEEEECCC--CCcEEEEEECCCC--CEEEEecCC-----CcccCeEECCCCCEEEEEECcCC---c
Confidence 1112223333334444444322 1347999999887 444443221 12222333446666666665432 3
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccC
Q 001895 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (999)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~ 381 (999)
..++.++..+. .. ...... . ...+.++. +++++++++.... ...|+++|+.......+...
T Consensus 335 ~~i~~~d~~~~-~~--~~l~~~---~-~~~~~~~spdg~~l~~~s~~~~------~~~l~~~d~~g~~~~~l~~~ 396 (415)
T 2hqs_A 335 QHIAKQDLATG-GV--QVLSST---F-LDETPSLAPNGTMVIYSSSQGM------GSVLNLVSTDGRFKARLPAT 396 (415)
T ss_dssp EEEEEEETTTC-CE--EECCCS---S-SCEEEEECTTSSEEEEEEEETT------EEEEEEEETTSCCEEECCCS
T ss_pred eEEEEEECCCC-CE--EEecCC---C-CcCCeEEcCCCCEEEEEEcCCC------ccEEEEEECCCCcEEEeeCC
Confidence 45666766544 33 233221 1 22233333 5677777664332 23699999998887776543
No 90
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=92.50 E-value=4.3 Score=43.06 Aligned_cols=151 Identities=13% Similarity=0.132 Sum_probs=83.0
Q ss_pred CEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCC
Q 001895 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
+++++.|.. ...++++|..+.+..|+.-. ......|.+.+..++.+|+.+ -+.++.||+ +.
T Consensus 5 ~~~lv~~~~------~~~v~~~d~~tG~~~w~~~~-----~~~~~~~~~~~~pdG~ilvs~-------~~~V~~~d~-~G 65 (276)
T 3no2_A 5 QHLLVGGSG------WNKIAIINKDTKEIVWEYPL-----EKGWECNSVAATKAGEILFSY-------SKGAKMITR-DG 65 (276)
T ss_dssp CEEEEECTT------CSEEEEEETTTTEEEEEEEC-----CTTCCCCEEEECTTSCEEEEC-------BSEEEEECT-TS
T ss_pred CcEEEeeCC------CCEEEEEECCCCeEEEEeCC-----CccCCCcCeEECCCCCEEEeC-------CCCEEEECC-CC
Confidence 567777653 26899999977655687653 111234555566555777732 245999999 66
Q ss_pred CceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCC-CCCCcceeEEEEEC
Q 001895 265 PYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGV-SPSPRYQHAAVFVN 343 (999)
Q Consensus 265 ~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~-~P~~R~~hsav~~~ 343 (999)
...|+.-.... ...+.+....++.+++....+ ...++.++....-.|++...... .+...........+
T Consensus 66 ~~~W~~~~~~~-----~~~~~~~~~~dG~~lv~~~~~-----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~ 135 (276)
T 3no2_A 66 RELWNIAAPAG-----CEMQTARILPDGNALVAWCGH-----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKK 135 (276)
T ss_dssp CEEEEEECCTT-----CEEEEEEECTTSCEEEEEEST-----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTT
T ss_pred CEEEEEcCCCC-----ccccccEECCCCCEEEEecCC-----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCC
Confidence 66888654211 123344455677777764431 23466676543334555433221 01111122233446
Q ss_pred CEEEEEcCcCCCCCCcccCCeEEEEECCCCe
Q 001895 344 ARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (999)
Q Consensus 344 ~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~ 374 (999)
+.++|.... ...|.+||++ ++
T Consensus 136 G~~lv~~~~---------~~~v~~~d~~-G~ 156 (276)
T 3no2_A 136 GNYLVPLFA---------TSEVREIAPN-GQ 156 (276)
T ss_dssp SCEEEEETT---------TTEEEEECTT-SC
T ss_pred CCEEEEecC---------CCEEEEECCC-CC
Confidence 666665432 3458999997 53
No 91
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=92.07 E-value=16 Score=40.00 Aligned_cols=94 Identities=11% Similarity=0.077 Sum_probs=49.9
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
..+.+||+.+..-...... ....-.+++.. ++.+++.|+.+ ..+.+||+.+... -..+. + ...
T Consensus 119 g~i~iwd~~~~~~~~~~~~----h~~~v~~~~~~~~~~~l~s~s~d------~~i~iwd~~~~~~-~~~~~--~---h~~ 182 (420)
T 3vl1_A 119 GDIKVLDSNFNLQREIDQA----HVSEITKLKFFPSGEALISSSQD------MQLKIWSVKDGSN-PRTLI--G---HRA 182 (420)
T ss_dssp SCEEEECTTSCEEEEETTS----SSSCEEEEEECTTSSEEEEEETT------SEEEEEETTTCCC-CEEEE--C---CSS
T ss_pred CCEEEEeCCCcceeeeccc----ccCccEEEEECCCCCEEEEEeCC------CeEEEEeCCCCcC-ceEEc--C---CCC
Confidence 3678888887765444211 11111222222 34566666642 4799999987531 12221 0 111
Q ss_pred cccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCC
Q 001895 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 229 ~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
.-.+++...++.+++.|+.++ .+..||+.+.
T Consensus 183 ~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~ 213 (420)
T 3vl1_A 183 TVTDIAIIDRGRNVLSASLDG-----TIRLWECGTG 213 (420)
T ss_dssp CEEEEEEETTTTEEEEEETTS-----CEEEEETTTT
T ss_pred cEEEEEEcCCCCEEEEEcCCC-----cEEEeECCCC
Confidence 122334444445677777765 5788898876
No 92
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=91.91 E-value=5 Score=43.22 Aligned_cols=196 Identities=10% Similarity=0.117 Sum_probs=97.7
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--C--CEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCC
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--G--TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g--~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~ 226 (999)
.+.+||+.+.+|..+.... .....-..+.+ . +.+++.|+.+ ..+.+||+.+.. ........+ .
T Consensus 80 ~v~iwd~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~l~~~~~d------~~i~v~d~~~~~-~~~~~~~~~---~ 146 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHA---VHSASVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKENG-TTSPIIIDA---H 146 (379)
T ss_dssp CEEEEEEETTEEEEEEEEC---CCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEECCTTS-CCCEEEEEC---C
T ss_pred EEEEEEcCCCceeEeeeec---CCCcceEEEEeCCCCCCCEEEEecCC------CcEEEEecCCCC-ceeeEEecC---C
Confidence 6888999999887765542 11112222222 2 4566666642 578899988752 122211111 1
Q ss_pred CCcccEEEEEC-------------CcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeC--
Q 001895 227 PRYGHVMALVG-------------QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSD-- 291 (999)
Q Consensus 227 ~R~~h~~~v~~-------------~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~-- 291 (999)
...-.+++... ++.+++.|+.++ .+..||+.+....|..+....... ......+...+
T Consensus 147 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~h~--~~v~~~~~sp~~~ 219 (379)
T 3jrp_A 147 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGHS--DWVRDVAWSPTVL 219 (379)
T ss_dssp TTCEEEEEECCCC----------CTTCEEEEEETTS-----CEEEEEEETTTTEEEEEEEECCCS--SCEEEEEECCCCS
T ss_pred CCceEEEEEcCccccccccccCCCCCCEEEEEeCCC-----eEEEEEecCCCcceeeEEEEeccc--CcEeEEEECCCCC
Confidence 11112222222 236778888776 577788765543565553322110 11122223334
Q ss_pred -CEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEE
Q 001895 292 -GLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLD 369 (999)
Q Consensus 292 -~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD 369 (999)
+.+++.|+.++. ..+|.+..... .+........ .....-.++++. ++.++++|+.++ .|.+||
T Consensus 220 ~~~~l~s~~~dg~----i~iwd~~~~~~-~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~~~~dg---------~i~iw~ 284 (379)
T 3jrp_A 220 LRSYLASVSQDRT----CIIWTQDNEQG-PWKKTLLKEE-KFPDVLWRASWSLSGNVLALSGGDN---------KVTLWK 284 (379)
T ss_dssp SSEEEEEEETTSC----EEEEEESSTTS-CCEEEESSSS-CCSSCEEEEEECSSSCCEEEEESSS---------SEEEEE
T ss_pred CCCeEEEEeCCCE----EEEEeCCCCCc-cceeeeeccc-cCCCcEEEEEEcCCCCEEEEecCCC---------cEEEEe
Confidence 788888887653 23444433221 2222222211 122222333333 567777776532 377777
Q ss_pred CC-CCeEEEcccC
Q 001895 370 TA-AGVWCDTKSV 381 (999)
Q Consensus 370 ~~-t~~W~~v~~~ 381 (999)
+. ...|..+...
T Consensus 285 ~~~~~~~~~~~~~ 297 (379)
T 3jrp_A 285 ENLEGKWEPAGEV 297 (379)
T ss_dssp EEETTEEEEEEEE
T ss_pred CCCCCccccccce
Confidence 76 5688887665
No 93
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=91.69 E-value=4.9 Score=44.56 Aligned_cols=183 Identities=14% Similarity=0.131 Sum_probs=91.5
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
+.+++||..+++........ ....-.+++.. ++.+++.|+.+ ..+.+||+.+.. ....- ....
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~---~~~~v~~v~~s~~~~~l~~~~~d------g~i~iwd~~~~~--~~~~~-----~~~~ 176 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETD---ESTYVASVKWSHDGSFLSVGLGN------GLVDIYDVESQT--KLRTM-----AGHQ 176 (401)
T ss_dssp TEEEEEETTTCCEEEEEECC---TTCCEEEEEECTTSSEEEEEETT------SCEEEEETTTCC--EEEEE-----CCCS
T ss_pred CeEEEeeCCCCcEeEeeecC---CCCCEEEEEECCCCCEEEEECCC------CeEEEEECcCCe--EEEEe-----cCCC
Confidence 37899999988876664431 11111222222 44566666642 478999998753 22221 1112
Q ss_pred cccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcc
Q 001895 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (999)
Q Consensus 229 ~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~ 308 (999)
..-..+.+++ .+++.|+.++ .+..||+......-..+..... .........++.+++.|+.++.
T Consensus 177 ~~v~~~~~~~-~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~s~~~d~~----- 240 (401)
T 4aez_A 177 ARVGCLSWNR-HVLSSGSRSG-----AIHHHDVRIANHQIGTLQGHSS-----EVCGLAWRSDGLQLASGGNDNV----- 240 (401)
T ss_dssp SCEEEEEEET-TEEEEEETTS-----EEEEEETTSSSCEEEEEECCSS-----CEEEEEECTTSSEEEEEETTSC-----
T ss_pred CceEEEEECC-CEEEEEcCCC-----CEEEEecccCcceeeEEcCCCC-----CeeEEEEcCCCCEEEEEeCCCe-----
Confidence 2223333444 4777777665 6888998743112222221111 1122223336777888876542
Q ss_pred cEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE--CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEE
Q 001895 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (999)
Q Consensus 309 d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~--~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~ 377 (999)
+..++..+. .-...... ....-.++++. +..+++.||-.. ...|.+||+.+.+-..
T Consensus 241 -v~iwd~~~~-~~~~~~~~----~~~~v~~~~~~p~~~~ll~~~~gs~-------d~~i~i~d~~~~~~~~ 298 (401)
T 4aez_A 241 -VQIWDARSS-IPKFTKTN----HNAAVKAVAWCPWQSNLLATGGGTM-------DKQIHFWNAATGARVN 298 (401)
T ss_dssp -EEEEETTCS-SEEEEECC----CSSCCCEEEECTTSTTEEEEECCTT-------TCEEEEEETTTCCEEE
T ss_pred -EEEccCCCC-CccEEecC----CcceEEEEEECCCCCCEEEEecCCC-------CCEEEEEECCCCCEEE
Confidence 344444332 21222211 11112333443 456777775211 3458999998876543
No 94
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=91.59 E-value=16 Score=38.97 Aligned_cols=95 Identities=9% Similarity=0.162 Sum_probs=51.8
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--C--CEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCC
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--G--TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g--~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~ 226 (999)
.+.+||+....+..+.... .....-..+.+ . +.+++.|+.+ ..+.+||+.+. +|..+... ..
T Consensus 34 ~i~iw~~~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~~~l~s~~~d------g~v~iwd~~~~--~~~~~~~~---~~ 99 (379)
T 3jrp_A 34 TIKIFEVEGETHKLIDTLT---GHEGPVWRVDWAHPKFGTILASCSYD------GKVLIWKEENG--RWSQIAVH---AV 99 (379)
T ss_dssp CEEEEEEETTEEEEEEEEC---CCSSCEEEEEECCGGGCSEEEEEETT------SCEEEEEEETT--EEEEEEEE---CC
T ss_pred cEEEEecCCCcceeeeEec---CCCCcEEEEEeCCCCCCCEEEEeccC------CEEEEEEcCCC--ceeEeeee---cC
Confidence 5777888766666654331 11111222233 2 4666666642 46899999885 46665532 21
Q ss_pred CCcc-cEEEEECC--cEEEEEccCCCCCCCCeEEEEECCCC
Q 001895 227 PRYG-HVMALVGQ--RYLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 227 ~R~~-h~~~v~~~--~~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
.... .+++...+ +.+++.|+.++ .+..||+.+.
T Consensus 100 ~~~~v~~~~~~~~~~~~~l~~~~~d~-----~i~v~d~~~~ 135 (379)
T 3jrp_A 100 HSASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEFKEN 135 (379)
T ss_dssp CSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEECCTT
T ss_pred CCcceEEEEeCCCCCCCEEEEecCCC-----cEEEEecCCC
Confidence 2222 22333332 35777777665 6778888665
No 95
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=91.26 E-value=13 Score=39.97 Aligned_cols=96 Identities=5% Similarity=-0.044 Sum_probs=49.2
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCc
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~ 229 (999)
.+|.+|..+++++.+........ -..++.. ++++|+.+..+ ....+++||+.+. ++..+.... .....
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~~---p~~~a~spdg~l~~~~~~~----~~~~v~~~~~~~g--~~~~~~~~~--~~~~~ 87 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQN---PTYLALSAKDCLYSVDKED----DEGGIAAWQIDGQ--TAHKLNTVV--APGTP 87 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECSC---CCCEEECTTCEEEEEEEET----TEEEEEEEEEETT--EEEEEEEEE--EESCC
T ss_pred EEEEEcCCCCeEEEeeeeeccCC---cceEEEccCCeEEEEEecC----CCceEEEEEecCC--cEEEeeeee--cCCCC
Confidence 57888888888877543211111 1223333 45776665321 1357999999764 355544210 01111
Q ss_pred ccEEEEEC-CcEEEEEccCCCCCCCCeEEEEECC
Q 001895 230 GHVMALVG-QRYLMAIGGNDGKRPLADVWALDTA 262 (999)
Q Consensus 230 ~h~~~v~~-~~~Lyv~GG~~g~~~~ndv~~yDl~ 262 (999)
-..+++-. +.+||+.+..+ ..+..||+.
T Consensus 88 p~~~a~spdg~~l~~~~~~~-----~~v~v~~~~ 116 (347)
T 3hfq_A 88 PAYVAVDEARQLVYSANYHK-----GTAEVMKIA 116 (347)
T ss_dssp CSEEEEETTTTEEEEEETTT-----TEEEEEEEC
T ss_pred CEEEEECCCCCEEEEEeCCC-----CEEEEEEeC
Confidence 22334443 33566665322 357777774
No 96
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=91.21 E-value=7.8 Score=40.81 Aligned_cols=151 Identities=15% Similarity=0.057 Sum_probs=74.4
Q ss_pred CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCc-ccEEEEECCcEEEEEccCCCCCCCCeEEEEECC
Q 001895 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY-GHVMALVGQRYLMAIGGNDGKRPLADVWALDTA 262 (999)
Q Consensus 184 g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~-~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~ 262 (999)
++..++.|+.+ ..+.+||+.+.. +...... ..... -.+++...++.+++.|+.++ .+..||+.
T Consensus 108 ~~~~l~~~~~d------~~i~~~d~~~~~--~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~dg-----~v~~~d~~ 171 (337)
T 1gxr_A 108 DGCTLIVGGEA------STLSIWDLAAPT--PRIKAEL---TSSAPACYALAISPDSKVCFSCCSDG-----NIAVWDLH 171 (337)
T ss_dssp TSSEEEEEESS------SEEEEEECCCC----EEEEEE---ECSSSCEEEEEECTTSSEEEEEETTS-----CEEEEETT
T ss_pred CCCEEEEEcCC------CcEEEEECCCCC--cceeeec---ccCCCceEEEEECCCCCEEEEEeCCC-----cEEEEeCC
Confidence 34556666542 579999998753 3222211 11111 12333343445777777665 58899998
Q ss_pred CCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE
Q 001895 263 AKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV 342 (999)
Q Consensus 263 s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~ 342 (999)
+. +....-.... ..........++.+++.|+.++ .+..++.... +-..... ....-.++++.
T Consensus 172 ~~--~~~~~~~~~~----~~i~~~~~~~~~~~l~~~~~dg------~i~~~d~~~~-~~~~~~~-----~~~~v~~~~~s 233 (337)
T 1gxr_A 172 NQ--TLVRQFQGHT----DGASCIDISNDGTKLWTGGLDN------TVRSWDLREG-RQLQQHD-----FTSQIFSLGYC 233 (337)
T ss_dssp TT--EEEEEECCCS----SCEEEEEECTTSSEEEEEETTS------EEEEEETTTT-EEEEEEE-----CSSCEEEEEEC
T ss_pred CC--ceeeeeeccc----CceEEEEECCCCCEEEEEecCC------cEEEEECCCC-ceEeeec-----CCCceEEEEEC
Confidence 87 4333221111 1122222333666777777543 3445555433 2121111 11112233332
Q ss_pred -CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEE
Q 001895 343 -NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (999)
Q Consensus 343 -~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~ 377 (999)
++.++++|+.+ ..+.+||+.+.+-..
T Consensus 234 ~~~~~l~~~~~~---------~~i~~~~~~~~~~~~ 260 (337)
T 1gxr_A 234 PTGEWLAVGMES---------SNVEVLHVNKPDKYQ 260 (337)
T ss_dssp TTSSEEEEEETT---------SCEEEEETTSSCEEE
T ss_pred CCCCEEEEEcCC---------CcEEEEECCCCCeEE
Confidence 56677777642 348899998876433
No 97
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=91.06 E-value=10 Score=45.03 Aligned_cols=111 Identities=16% Similarity=0.261 Sum_probs=61.9
Q ss_pred eEEEEECCCCc--EEEecCCCCCCCC---CcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCC
Q 001895 151 DVHCYDVLTNK--WSRITPFGEPPTP---RAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (999)
Q Consensus 151 dv~~yD~~t~~--W~~l~~~g~~P~p---R~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P 225 (999)
.+++||..+.+ |+.-........+ ....+.++.+++||+... ...++.+|..+....|+.-.. .+
T Consensus 79 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~-------dg~l~AlD~~TG~~~W~~~~~---~~ 148 (582)
T 1flg_A 79 RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL-------DASVVALNKNTGKVVWKKKFA---DH 148 (582)
T ss_dssp EEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET-------TTEEEEEESSSCCEEEEEECS---CG
T ss_pred CEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC-------CCEEEEEECCCCCEEeeecCC---CC
Confidence 48899998765 8875433110001 112344567888887532 257999999987778986531 11
Q ss_pred CCCc--ccEEEEECC----cEEEEEccCCC-CCCCCeEEEEECCCCCceEEEc
Q 001895 226 GPRY--GHVMALVGQ----RYLMAIGGNDG-KRPLADVWALDTAAKPYEWRKL 271 (999)
Q Consensus 226 ~~R~--~h~~~v~~~----~~Lyv~GG~~g-~~~~ndv~~yDl~s~~~~W~~v 271 (999)
...+ ..+-++.++ ..++++|...+ ...-..++.||..+....|+.-
T Consensus 149 ~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~ 201 (582)
T 1flg_A 149 GAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRP 201 (582)
T ss_dssp GGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEE
T ss_pred CcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecC
Confidence 1111 112223332 11344443211 1124579999999988889763
No 98
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=90.75 E-value=19 Score=38.07 Aligned_cols=187 Identities=13% Similarity=0.053 Sum_probs=90.1
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCC-CCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGP-GPGP 227 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~-~P~~ 227 (999)
+.+++||+.+.....+... .+ -.+.+.. ++.+|+..+ +.+++||+.+. +++.+..... .+..
T Consensus 35 ~~i~~~d~~~~~~~~~~~~-----~~-~~~i~~~~dG~l~v~~~--------~~l~~~d~~~g--~~~~~~~~~~~~~~~ 98 (297)
T 3g4e_A 35 KKVCRWDSFTKQVQRVTMD-----AP-VSSVALRQSGGYVATIG--------TKFCALNWKEQ--SAVVLATVDNDKKNN 98 (297)
T ss_dssp TEEEEEETTTCCEEEEECS-----SC-EEEEEEBTTSSEEEEET--------TEEEEEETTTT--EEEEEEECCTTCSSE
T ss_pred CEEEEEECCCCcEEEEeCC-----Cc-eEEEEECCCCCEEEEEC--------CeEEEEECCCC--cEEEEEecCCCCCCC
Confidence 4789999998876554321 11 1223333 345555431 47999999875 4666543211 1222
Q ss_pred CcccEEEEECCcEEEEEccCCC------CCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEE-eC-CEEEEEec
Q 001895 228 RYGHVMALVGQRYLMAIGGNDG------KRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASAR-SD-GLLLLCGG 299 (999)
Q Consensus 228 R~~h~~~v~~~~~Lyv~GG~~g------~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~-~~-~~LyvfGG 299 (999)
|.. .+++-.++.||+..-... ......+|++|.... ...+..... .....++ .+ +.||+...
T Consensus 99 ~~~-di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~---~~~~~~~~~------~pngi~~spdg~~lyv~~~ 168 (297)
T 3g4e_A 99 RFN-DGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH---VKKYFDQVD------ISNGLDWSLDHKIFYYIDS 168 (297)
T ss_dssp EEE-EEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC---EEEEEEEES------BEEEEEECTTSCEEEEEEG
T ss_pred CCC-CEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC---EEEEeeccc------cccceEEcCCCCEEEEecC
Confidence 222 233344446776421111 112457899988532 333221111 1112222 23 46777654
Q ss_pred cCCCCCCcccEEEEecC-CCCeEE----EEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCC
Q 001895 300 RDASSVPLASAYGLAKH-RDGRWE----WAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAG 373 (999)
Q Consensus 300 ~~~~~~~~~d~~~~~~~-~~~~W~----w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~ 373 (999)
. ...++.|+.. .++... +..... ....-.++++- +++|||..-. ...|.+||++++
T Consensus 169 ~------~~~i~~~~~d~~~G~~~~~~~~~~~~~---~~~~p~g~~~d~~G~lwva~~~---------~~~v~~~d~~tG 230 (297)
T 3g4e_A 169 L------SYSVDAFDYDLQTGQISNRRSVYKLEK---EEQIPDGMCIDAEGKLWVACYN---------GGRVIRLDPVTG 230 (297)
T ss_dssp G------GTEEEEEEECTTTCCEEEEEEEEECCG---GGCEEEEEEEBTTSCEEEEEET---------TTEEEEECTTTC
T ss_pred C------CCcEEEEeccCCCCcccCcEEEEECCC---CCCCCCeeEECCCCCEEEEEcC---------CCEEEEEcCCCc
Confidence 2 2345666542 333332 111111 11111233332 5788887421 235999999988
Q ss_pred eEEEccc
Q 001895 374 VWCDTKS 380 (999)
Q Consensus 374 ~W~~v~~ 380 (999)
+....-.
T Consensus 231 ~~~~~i~ 237 (297)
T 3g4e_A 231 KRLQTVK 237 (297)
T ss_dssp CEEEEEE
T ss_pred eEEEEEE
Confidence 7654433
No 99
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=90.70 E-value=20 Score=38.35 Aligned_cols=181 Identities=14% Similarity=0.147 Sum_probs=90.5
Q ss_pred cCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCC
Q 001895 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (999)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~ 227 (999)
...+.++|+.+.+-...-... +. .-.+++.. ++..++.|+. ...+.+||+.+....+. +. ...
T Consensus 101 D~~i~lWd~~~~~~~~~~~~~--~~--~~~~~~~spdg~~l~~g~~------dg~v~i~~~~~~~~~~~-~~-----~~~ 164 (321)
T 3ow8_A 101 DAHIRLWDLENGKQIKSIDAG--PV--DAWTLAFSPDSQYLATGTH------VGKVNIFGVESGKKEYS-LD-----TRG 164 (321)
T ss_dssp TSEEEEEETTTTEEEEEEECC--TT--CCCCEEECTTSSEEEEECT------TSEEEEEETTTCSEEEE-EE-----CSS
T ss_pred CCcEEEEECCCCCEEEEEeCC--Cc--cEEEEEECCCCCEEEEEcC------CCcEEEEEcCCCceeEE-ec-----CCC
Confidence 347888999887644332211 11 11223332 4466666664 25688999987542222 21 111
Q ss_pred CcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCc
Q 001895 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPL 307 (999)
Q Consensus 228 R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~ 307 (999)
..-.+++...++.+++.|+.++ .+..||+.+. +-...-.... ..........++.+++.|+.++.
T Consensus 165 ~~v~~~~~spdg~~lasg~~dg-----~i~iwd~~~~--~~~~~~~~h~----~~v~~l~~spd~~~l~s~s~dg~---- 229 (321)
T 3ow8_A 165 KFILSIAYSPDGKYLASGAIDG-----IINIFDIATG--KLLHTLEGHA----MPIRSLTFSPDSQLLVTASDDGY---- 229 (321)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEETTTT--EEEEEECCCS----SCCCEEEECTTSCEEEEECTTSC----
T ss_pred ceEEEEEECCCCCEEEEEcCCC-----eEEEEECCCC--cEEEEEcccC----CceeEEEEcCCCCEEEEEcCCCe----
Confidence 2223344444456777888775 5888999877 3322111111 01122233346778888876543
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEE
Q 001895 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (999)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~ 376 (999)
+..++.... ..... ..+ ....-.++++. ++.+++.|+.++ .|.+||+.+.+-.
T Consensus 230 --i~iwd~~~~-~~~~~-~~~---h~~~v~~~~~sp~~~~l~s~s~D~---------~v~iwd~~~~~~~ 283 (321)
T 3ow8_A 230 --IKIYDVQHA-NLAGT-LSG---HASWVLNVAFCPDDTHFVSSSSDK---------SVKVWDVGTRTCV 283 (321)
T ss_dssp --EEEEETTTC-CEEEE-ECC---CSSCEEEEEECTTSSEEEEEETTS---------CEEEEETTTTEEE
T ss_pred --EEEEECCCc-ceeEE-EcC---CCCceEEEEECCCCCEEEEEeCCC---------cEEEEeCCCCEEE
Confidence 333443322 11111 111 11112233333 567777777533 4888999887543
No 100
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=90.68 E-value=18 Score=38.95 Aligned_cols=98 Identities=7% Similarity=0.064 Sum_probs=49.2
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
.+|.+|..+.+++.+... ....| ..++.. +..||+.+..+. ....+.+|++...+.+...+..... ...
T Consensus 30 ~~~~~d~~~g~~~~~~~~-~~~~p---~~l~~spdg~~l~~~~~~~~---~~~~v~~~~~~~~~g~~~~~~~~~~--~~~ 100 (361)
T 3scy_A 30 YTFRFNEETGESLPLSDA-EVANP---SYLIPSADGKFVYSVNEFSK---DQAAVSAFAFDKEKGTLHLLNTQKT--MGA 100 (361)
T ss_dssp EEEEEETTTCCEEEEEEE-ECSCC---CSEEECTTSSEEEEEECCSS---TTCEEEEEEEETTTTEEEEEEEEEC--SSS
T ss_pred EEEEEeCCCCCEEEeecc-cCCCC---ceEEECCCCCEEEEEEccCC---CCCcEEEEEEeCCCCcEEEeeEecc--CCC
Confidence 466778888888776543 11111 122322 335666654311 1246766666554334655542210 112
Q ss_pred cccEEEEECCcEEEEEccCCCCCCCCeEEEEECCC
Q 001895 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (999)
Q Consensus 229 ~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s 263 (999)
.-+.++. +++.||+.+..+ ..+.+|++.+
T Consensus 101 ~p~~~~~-dg~~l~~~~~~~-----~~v~~~~~~~ 129 (361)
T 3scy_A 101 DPCYLTT-NGKNIVTANYSG-----GSITVFPIGQ 129 (361)
T ss_dssp CEEEEEE-CSSEEEEEETTT-----TEEEEEEBCT
T ss_pred CcEEEEE-CCCEEEEEECCC-----CEEEEEEeCC
Confidence 2223333 665677765433 3678888764
No 101
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=90.33 E-value=6.1 Score=42.04 Aligned_cols=104 Identities=13% Similarity=0.048 Sum_probs=52.1
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCC-
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG- 226 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~- 226 (999)
+.++++|+.+++.......+ .....+..+.. ++.+|+.+.. ...+++||+.+.. ....-..+..+.
T Consensus 21 ~~v~~~d~~~~~~~~~~~~~---~~~~~~~~~~s~dg~~~~v~~~~------~~~i~~~d~~t~~--~~~~~~~~~~~~~ 89 (349)
T 1jmx_B 21 NNLHVVDVASDTVYKSCVMP---DKFGPGTAMMAPDNRTAYVLNNH------YGDIYGIDLDTCK--NTFHANLSSVPGE 89 (349)
T ss_dssp TEEEEEETTTTEEEEEEECS---SCCSSCEEEECTTSSEEEEEETT------TTEEEEEETTTTE--EEEEEESCCSTTE
T ss_pred CeEEEEECCCCcEEEEEecC---CCCCCceeEECCCCCEEEEEeCC------CCcEEEEeCCCCc--EEEEEEccccccc
Confidence 48999999998765443332 10012344443 3367777642 2579999998753 322221111111
Q ss_pred -CCcccEEEEEC-CcEEEEEccC---CCCC---CCCeEEEEECCCC
Q 001895 227 -PRYGHVMALVG-QRYLMAIGGN---DGKR---PLADVWALDTAAK 264 (999)
Q Consensus 227 -~R~~h~~~v~~-~~~Lyv~GG~---~g~~---~~ndv~~yDl~s~ 264 (999)
...-+.++.-. +.+||+.+.. .... ..+.+++||+.+.
T Consensus 90 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 135 (349)
T 1jmx_B 90 VGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADG 135 (349)
T ss_dssp EEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGG
T ss_pred ccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCc
Confidence 11223444443 3355554421 0000 1257999998763
No 102
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=90.32 E-value=34 Score=40.35 Aligned_cols=81 Identities=11% Similarity=0.034 Sum_probs=45.9
Q ss_pred CEEEEEcccC---------CCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEE----CCc--EEEEEccCCC
Q 001895 185 TMVVIQGGIG---------PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV----GQR--YLMAIGGNDG 249 (999)
Q Consensus 185 ~~iyv~GG~~---------~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~----~~~--~Lyv~GG~~g 249 (999)
+.||+..|.. .+..+...++.+|..+...+|+.-....+...-......+++ ++. ++++++..++
T Consensus 247 g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G 326 (571)
T 2ad6_A 247 NLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNG 326 (571)
T ss_dssp TEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTS
T ss_pred CeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCc
Confidence 5777765531 122234579999999877789875422111111111111222 332 3666665544
Q ss_pred CCCCCeEEEEECCCCCceEEE
Q 001895 250 KRPLADVWALDTAAKPYEWRK 270 (999)
Q Consensus 250 ~~~~ndv~~yDl~s~~~~W~~ 270 (999)
.++++|..+....|..
T Consensus 327 -----~l~~lD~~tG~~~w~~ 342 (571)
T 2ad6_A 327 -----ILYTLNRENGNLIVAE 342 (571)
T ss_dssp -----EEEEEETTTCCEEEEE
T ss_pred -----EEEEEECCCCCEEeee
Confidence 6899999888777875
No 103
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=89.96 E-value=17 Score=39.03 Aligned_cols=179 Identities=15% Similarity=0.110 Sum_probs=83.9
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEee-cCCCCCC
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVV-QGPGPGP 227 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~-~g~~P~~ 227 (999)
.+.++|..+..-...... ....-..+.+ ++.+++.||.+ ..+.+||+.+.......... .+. ..
T Consensus 78 ~v~iWd~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~s~~~d------~~v~iw~~~~~~~~~~~~~~~~~h--~~ 144 (340)
T 1got_B 78 KLIIWDSYTTNKVHAIPL-----RSSWVMTCAYAPSGNYVACGGLD------NICSIYNLKTREGNVRVSRELAGH--TG 144 (340)
T ss_dssp EEEEEETTTCCEEEEEEC-----SSSCEEEEEECTTSSEEEEEETT------CEEEEEETTTCSBSCEEEEEEECC--SS
T ss_pred cEEEEECCCCCcceEeec-----CCccEEEEEECCCCCEEEEEeCC------CeEEEEECccCCCcceeEEEecCC--Cc
Confidence 678888877653322111 1111122222 34666677642 56888998764322222211 110 11
Q ss_pred CcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCc
Q 001895 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPL 307 (999)
Q Consensus 228 R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~ 307 (999)
.-.++....++. ++.|+.++ .+..||+.+. +-...-.... ..........++.+++.|+.++.
T Consensus 145 -~v~~~~~~~~~~-l~s~s~d~-----~i~~wd~~~~--~~~~~~~~h~----~~v~~~~~~~~~~~l~sg~~d~~---- 207 (340)
T 1got_B 145 -YLSCCRFLDDNQ-IVTSSGDT-----TCALWDIETG--QQTTTFTGHT----GDVMSLSLAPDTRLFVSGACDAS---- 207 (340)
T ss_dssp -CEEEEEEEETTE-EEEEETTS-----CEEEEETTTT--EEEEEECCCS----SCEEEEEECTTSSEEEEEETTSC----
T ss_pred -cEEEEEECCCCc-EEEEECCC-----cEEEEECCCC--cEEEEEcCCC----CceEEEEECCCCCEEEEEeCCCc----
Confidence 111222333434 55566554 5788999877 4332211111 11122223346778888886643
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeE
Q 001895 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (999)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W 375 (999)
+..++..+. .-.... .+ ....-.++++. ++.+++.|+.+ ..|.+||+.+.+-
T Consensus 208 --v~~wd~~~~-~~~~~~-~~---h~~~v~~v~~~p~~~~l~s~s~d---------~~v~iwd~~~~~~ 260 (340)
T 1got_B 208 --AKLWDVREG-MCRQTF-TG---HESDINAICFFPNGNAFATGSDD---------ATCRLFDLRADQE 260 (340)
T ss_dssp --EEEEETTTC-SEEEEE-CC---CSSCEEEEEECTTSSEEEEEETT---------SCEEEEETTTTEE
T ss_pred --EEEEECCCC-eeEEEE-cC---CcCCEEEEEEcCCCCEEEEEcCC---------CcEEEEECCCCcE
Confidence 233333322 111111 11 11112233333 56778888753 3488899988754
No 104
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=89.95 E-value=28 Score=38.80 Aligned_cols=173 Identities=13% Similarity=0.100 Sum_probs=85.8
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcc
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYG 230 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~ 230 (999)
.+.+||+.+.+-...-.. ....-.+....+.+++.|+.+ ..+.+||+.+.. -...- ......
T Consensus 140 ~i~vwd~~~~~~~~~~~~-----h~~~v~~~~~~~~~l~s~~~d------g~i~vwd~~~~~--~~~~~-----~~h~~~ 201 (445)
T 2ovr_B 140 TLKVWSAVTGKCLRTLVG-----HTGGVWSSQMRDNIIISGSTD------RTLKVWNAETGE--CIHTL-----YGHTST 201 (445)
T ss_dssp CEEEEETTTCCEEEECCC-----CSSCEEEEEEETTEEEEEETT------SCEEEEETTTTE--EEEEE-----CCCSSC
T ss_pred cEEEEECCCCcEEEEEcC-----CCCCEEEEEecCCEEEEEeCC------CeEEEEECCcCc--EEEEE-----CCCCCc
Confidence 688899887754332211 111112223334456666642 579999998752 21111 111112
Q ss_pred cEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccE
Q 001895 231 HVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASA 310 (999)
Q Consensus 231 h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~ 310 (999)
-.+..+.+ ..++.|+.++ .+..||+.+....+...... ....++.. ++..++.|+.++. +
T Consensus 202 v~~~~~~~-~~l~s~s~dg-----~i~~wd~~~~~~~~~~~~~~-------~~v~~~~~-~~~~l~~~~~dg~------i 261 (445)
T 2ovr_B 202 VRCMHLHE-KRVVSGSRDA-----TLRVWDIETGQCLHVLMGHV-------AAVRCVQY-DGRRVVSGAYDFM------V 261 (445)
T ss_dssp EEEEEEET-TEEEEEETTS-----EEEEEESSSCCEEEEEECCS-------SCEEEEEE-CSSCEEEEETTSC------E
T ss_pred EEEEEecC-CEEEEEeCCC-----EEEEEECCCCcEEEEEcCCc-------ccEEEEEE-CCCEEEEEcCCCE------E
Confidence 22333344 3567777664 68889998763233322111 11222333 6777777776542 3
Q ss_pred EEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEE
Q 001895 311 YGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (999)
Q Consensus 311 ~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~ 376 (999)
..++..+. .-..... + .... -.++..++..++.|+.+ ..|.+||+.+.+-.
T Consensus 262 ~iwd~~~~-~~~~~~~-~---~~~~-v~~~~~~~~~l~~~~~d---------~~i~i~d~~~~~~~ 312 (445)
T 2ovr_B 262 KVWDPETE-TCLHTLQ-G---HTNR-VYSLQFDGIHVVSGSLD---------TSIRVWDVETGNCI 312 (445)
T ss_dssp EEEEGGGT-EEEEEEC-C---CSSC-EEEEEECSSEEEEEETT---------SCEEEEETTTCCEE
T ss_pred EEEECCCC-cEeEEec-C---CCCc-eEEEEECCCEEEEEeCC---------CeEEEEECCCCCEE
Confidence 34444332 2222211 1 1111 22333377777777753 34889999887643
No 105
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=89.59 E-value=12 Score=40.15 Aligned_cols=134 Identities=16% Similarity=0.217 Sum_probs=64.5
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
+.+.+||+.+.+|..+..... ....-.+++.. ++.+++.|+.+ ..+.+||+.+. ++...... .....
T Consensus 30 ~~v~i~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~~~~~d------g~i~vwd~~~~--~~~~~~~~--~~~~~ 97 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHELKE--HNGQVTGVDWAPDSNRIVTCGTD------RNAYVWTLKGR--TWKPTLVI--LRINR 97 (372)
T ss_dssp SEEEEEEEETTEEEEEEEEEC--CSSCEEEEEEETTTTEEEEEETT------SCEEEEEEETT--EEEEEEEC--CCCSS
T ss_pred CEEEEEeCCCCcEEeeeeecC--CCCcccEEEEeCCCCEEEEEcCC------CeEEEEECCCC--eeeeeEEe--ecCCC
Confidence 378899999987666544310 11111222223 34566666542 46899999774 35444311 11122
Q ss_pred cccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCC
Q 001895 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (999)
Q Consensus 229 ~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~ 302 (999)
.-.+++...++.+++.|+.++ .+..||+.+.. .|........ +............++.+++.|+.++
T Consensus 98 ~v~~~~~~~~~~~l~~~~~d~-----~v~i~d~~~~~-~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg 164 (372)
T 1k8k_C 98 AARCVRWAPNEKKFAVGSGSR-----VISICYFEQEN-DWWVCKHIKK-PIRSTVLSLDWHPNSVLLAAGSCDF 164 (372)
T ss_dssp CEEEEEECTTSSEEEEEETTS-----SEEEEEEETTT-TEEEEEEECT-TCCSCEEEEEECTTSSEEEEEETTS
T ss_pred ceeEEEECCCCCEEEEEeCCC-----EEEEEEecCCC-cceeeeeeec-ccCCCeeEEEEcCCCCEEEEEcCCC
Confidence 223333334445777777654 35566665542 2322211111 0011122222333667777777654
No 106
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=89.58 E-value=22 Score=37.13 Aligned_cols=104 Identities=10% Similarity=0.021 Sum_probs=54.5
Q ss_pred cCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-C-CEEEEEcccCCCCCCcCcEEEEecCCCCCceEEE-eecCCCC
Q 001895 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-G-TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRV-VVQGPGP 225 (999)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g-~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v-~~~g~~P 225 (999)
.+.+++||+.++++..+...........-++++.. + +.+|+.... +.+++||.. .+ ...+ .......
T Consensus 45 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~-------~~l~~~d~~-g~--~~~~~~~~~~~~ 114 (314)
T 1pjx_A 45 AGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR-------LGLLVVQTD-GT--FEEIAKKDSEGR 114 (314)
T ss_dssp CCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT-------TEEEEEETT-SC--EEECCSBCTTSC
T ss_pred CCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC-------CCEEEEeCC-CC--EEEEEeccCCCc
Confidence 34789999988888776431000011112334433 3 678887542 368999987 43 5444 2111111
Q ss_pred CCCcccEEEEECCcEEEEEccCCC----------CCCCCeEEEEECC
Q 001895 226 GPRYGHVMALVGQRYLMAIGGNDG----------KRPLADVWALDTA 262 (999)
Q Consensus 226 ~~R~~h~~~v~~~~~Lyv~GG~~g----------~~~~ndv~~yDl~ 262 (999)
....-+.++...++.+|+....++ ......+++||+.
T Consensus 115 ~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (314)
T 1pjx_A 115 RMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD 161 (314)
T ss_dssp BCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT
T ss_pred cccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC
Confidence 112234455555557887654321 1123579999986
No 107
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=89.55 E-value=5.5 Score=48.74 Aligned_cols=95 Identities=9% Similarity=0.162 Sum_probs=53.7
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--C--CEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCC
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--G--TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g--~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~ 226 (999)
.+.+||+.+..+..+.... .....-..+.+ . +.+++.|+.+ ..+.+||+.+. +|..+... ..
T Consensus 32 ~I~vwd~~~~~~~~~~~l~---~h~~~V~~l~~s~~~~~~~l~s~s~D------g~I~vwd~~~~--~~~~~~~~---~~ 97 (753)
T 3jro_A 32 TIKIFEVEGETHKLIDTLT---GHEGPVWRVDWAHPKFGTILASCSYD------GKVLIWKEENG--RWSQIAVH---AV 97 (753)
T ss_dssp EEEEEEEETTEEEEEEEEC---CCSSCEEEEEECCTTSCSEEEEEETT------SCEEEEEEETT--EEEEEEEE---CC
T ss_pred cEEEEecCCCCCccceecc---CCcCceEEEEecCCCCCCEEEEEeCC------CeEEEEECCCC--cccccccc---cC
Confidence 6788888877777665431 11122222332 2 5666677642 56999999885 46665532 22
Q ss_pred CCcc-cEEEEECC--cEEEEEccCCCCCCCCeEEEEECCCC
Q 001895 227 PRYG-HVMALVGQ--RYLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 227 ~R~~-h~~~v~~~--~~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
.... .+++...+ +.+++.|+.++ .+..||+.+.
T Consensus 98 h~~~V~~v~~sp~~~~~~l~sgs~dg-----~I~vwdl~~~ 133 (753)
T 3jro_A 98 HSASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEFKEN 133 (753)
T ss_dssp CSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEECCSS
T ss_pred CCCCeEEEEECCCCCCCEEEEEeCCC-----cEEEEEeecC
Confidence 2222 22333332 35778887765 5778887654
No 108
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=89.45 E-value=5 Score=48.54 Aligned_cols=106 Identities=13% Similarity=0.123 Sum_probs=54.1
Q ss_pred cCeEEEEECCCCcEEEecCCCCCC-C------------CCc-------CcEEEEe-CCEEEEEcccCCCCCCcCcEEEEe
Q 001895 149 TADVHCYDVLTNKWSRITPFGEPP-T------------PRA-------AHVATAV-GTMVVIQGGIGPAGLSAEDLHVLD 207 (999)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P-~------------pR~-------~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD 207 (999)
...++.+|+.+.+...+....... . .|. -.+.+.- +++.++++.. ..++++|
T Consensus 63 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~-------~~i~~~d 135 (741)
T 2ecf_A 63 QLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG-------GELYLYD 135 (741)
T ss_dssp EEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEET-------TEEEEEE
T ss_pred ccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeC-------CcEEEEE
Confidence 458999999999887775431111 0 000 1122222 4444444442 6899999
Q ss_pred cCCCC-CceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccC
Q 001895 208 LTQQR-PRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPE 274 (999)
Q Consensus 208 ~~t~t-~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~ 274 (999)
+.+.. .+-..+. .....-...+.-.+++.++++.. ++++.+|+.+. +...+...
T Consensus 136 ~~~~~~~~~~~l~-----~~~~~~~~~~~SPDG~~la~~~~------~~i~~~d~~~g--~~~~~~~~ 190 (741)
T 2ecf_A 136 LKQEGKAAVRQLT-----HGEGFATDAKLSPKGGFVSFIRG------RNLWVIDLASG--RQMQLTAD 190 (741)
T ss_dssp SSSCSTTSCCBCC-----CSSSCEEEEEECTTSSEEEEEET------TEEEEEETTTT--EEEECCCC
T ss_pred CCCCCcceEEEcc-----cCCcccccccCCCCCCEEEEEeC------CcEEEEecCCC--CEEEeccC
Confidence 98740 0122221 11111222333333344444432 37999999888 77766543
No 109
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=89.26 E-value=24 Score=37.04 Aligned_cols=180 Identities=12% Similarity=0.129 Sum_probs=86.4
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCc
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~ 229 (999)
.+.++|..+.+....-.. ....-.+++.. ++.+++.|+.+ ..+.+||+.+.. .-..+. + ....
T Consensus 46 ~i~iw~~~~~~~~~~~~~----h~~~v~~~~~~~~~~~l~s~~~d------~~i~vwd~~~~~-~~~~~~--~---~~~~ 109 (312)
T 4ery_A 46 LIKIWGAYDGKFEKTISG----HKLGISDVAWSSDSNLLVSASDD------KTLKIWDVSSGK-CLKTLK--G---HSNY 109 (312)
T ss_dssp CEEEEETTTCCEEEEECC----CSSCEEEEEECTTSSEEEEEETT------SEEEEEETTTCC-EEEEEE--C---CSSC
T ss_pred eEEEEeCCCcccchhhcc----CCCceEEEEEcCCCCEEEEECCC------CEEEEEECCCCc-EEEEEc--C---CCCC
Confidence 577788877766554321 11111122222 34666677642 578999998753 111121 1 0111
Q ss_pred ccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCccc
Q 001895 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLAS 309 (999)
Q Consensus 230 ~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d 309 (999)
-.++....++.+++.|+.++ .+..||+.+. +-...-.... ..........++.+++.|+.++.
T Consensus 110 v~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~--~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~d~~------ 172 (312)
T 4ery_A 110 VFCCNFNPQSNLIVSGSFDE-----SVRIWDVKTG--KCLKTLPAHS----DPVSAVHFNRDGSLIVSSSYDGL------ 172 (312)
T ss_dssp EEEEEECSSSSEEEEEETTS-----CEEEEETTTC--CEEEEECCCS----SCEEEEEECTTSSEEEEEETTSC------
T ss_pred EEEEEEcCCCCEEEEEeCCC-----cEEEEECCCC--EEEEEecCCC----CcEEEEEEcCCCCEEEEEeCCCc------
Confidence 12233333345777787765 5888999876 3222111111 01111222335677777776542
Q ss_pred EEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEE
Q 001895 310 AYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (999)
Q Consensus 310 ~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~ 376 (999)
+..++..+. .......... ... -..+++. ++..++.|+. ...|.+||+.+.+-.
T Consensus 173 i~~wd~~~~-~~~~~~~~~~--~~~-~~~~~~~~~~~~l~~~~~---------d~~i~iwd~~~~~~~ 227 (312)
T 4ery_A 173 CRIWDTASG-QCLKTLIDDD--NPP-VSFVKFSPNGKYILAATL---------DNTLKLWDYSKGKCL 227 (312)
T ss_dssp EEEEETTTC-CEEEEECCSS--CCC-EEEEEECTTSSEEEEEET---------TTEEEEEETTTTEEE
T ss_pred EEEEECCCC-ceeeEEeccC--CCc-eEEEEECCCCCEEEEEcC---------CCeEEEEECCCCcEE
Confidence 334444332 2221211111 111 1122222 5666777764 245889999887643
No 110
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=89.13 E-value=28 Score=41.55 Aligned_cols=114 Identities=11% Similarity=-0.018 Sum_probs=56.8
Q ss_pred CCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCC
Q 001895 253 LADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPS 332 (999)
Q Consensus 253 ~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~ 332 (999)
...++++|+.+. +-..+..... ............+++.++++..+... ....++.++..+...+........ ..
T Consensus 234 ~~~l~~~d~~~~--~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~~-~~~~v~~~d~~~g~~~~~~~~~~~-~~ 307 (706)
T 2z3z_A 234 HVTVGIYHLATG--KTVYLQTGEP--KEKFLTNLSWSPDENILYVAEVNRAQ-NECKVNAYDAETGRFVRTLFVETD-KH 307 (706)
T ss_dssp EEEEEEEETTTT--EEEECCCCSC--TTCEEEEEEECTTSSEEEEEEECTTS-CEEEEEEEETTTCCEEEEEEEEEC-SS
T ss_pred eeEEEEEECCCC--ceEeeccCCC--CceeEeeEEEECCCCEEEEEEeCCCC-CeeEEEEEECCCCceeeEEEEccC-CC
Confidence 357999999887 5555432211 11112223333466655555544322 345666676654313332221111 00
Q ss_pred Cc-ceeEEEEE---CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcc
Q 001895 333 PR-YQHAAVFV---NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTK 379 (999)
Q Consensus 333 ~R-~~hsav~~---~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~ 379 (999)
.. ....+++. ++++++.+..++ ...+|.+|........+.
T Consensus 308 ~~~~~~~~~~sp~~dg~~l~~~~~~g-------~~~l~~~~~~~~~~~~l~ 351 (706)
T 2z3z_A 308 YVEPLHPLTFLPGSNNQFIWQSRRDG-------WNHLYLYDTTGRLIRQVT 351 (706)
T ss_dssp CCCCCSCCEECTTCSSEEEEEECTTS-------SCEEEEEETTSCEEEECC
T ss_pred eECccCCceeecCCCCEEEEEEccCC-------ccEEEEEECCCCEEEecC
Confidence 00 01122332 677666665432 356999998777777664
No 111
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=88.74 E-value=26 Score=36.76 Aligned_cols=180 Identities=13% Similarity=0.123 Sum_probs=85.6
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~ 227 (999)
..+.+||+.+.+-...-.. ....-..+.+ ++.+++.|+.+ ..+.+||+.+.. -...- +..
T Consensus 87 ~~i~vwd~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~~--~~~~~-----~~~ 148 (312)
T 4ery_A 87 KTLKIWDVSSGKCLKTLKG-----HSNYVFCCNFNPQSNLIVSGSFD------ESVRIWDVKTGK--CLKTL-----PAH 148 (312)
T ss_dssp SEEEEEETTTCCEEEEEEC-----CSSCEEEEEECSSSSEEEEEETT------SCEEEEETTTCC--EEEEE-----CCC
T ss_pred CEEEEEECCCCcEEEEEcC-----CCCCEEEEEEcCCCCEEEEEeCC------CcEEEEECCCCE--EEEEe-----cCC
Confidence 4788899887653322111 0111112222 34566666642 469999998753 21111 111
Q ss_pred Ccc-cEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCC
Q 001895 228 RYG-HVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVP 306 (999)
Q Consensus 228 R~~-h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~ 306 (999)
... .+++...++.+++.|+.++ .+..||+.+. +....-..... ..........++..++.|+.++
T Consensus 149 ~~~v~~~~~~~~~~~l~~~~~d~-----~i~~wd~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~d~---- 214 (312)
T 4ery_A 149 SDPVSAVHFNRDGSLIVSSSYDG-----LCRIWDTASG--QCLKTLIDDDN---PPVSFVKFSPNGKYILAATLDN---- 214 (312)
T ss_dssp SSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTC--CEEEEECCSSC---CCEEEEEECTTSSEEEEEETTT----
T ss_pred CCcEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCC--ceeeEEeccCC---CceEEEEECCCCCEEEEEcCCC----
Confidence 111 2223333445777787765 5888999876 33221111110 1112222334566677776543
Q ss_pred cccEEEEecCCCCeEEEEECCCCCCCCccee--EEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeE
Q 001895 307 LASAYGLAKHRDGRWEWAIAPGVSPSPRYQH--AAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (999)
Q Consensus 307 ~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~h--sav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W 375 (999)
.+..++..+. .-..... +.. ...... .....++.+++.|+.+ ..|.+||+.+.+=
T Consensus 215 --~i~iwd~~~~-~~~~~~~-~~~-~~~~~~~~~~~~~~~~~l~sg~~d---------g~i~vwd~~~~~~ 271 (312)
T 4ery_A 215 --TLKLWDYSKG-KCLKTYT-GHK-NEKYCIFANFSVTGGKWIVSGSED---------NLVYIWNLQTKEI 271 (312)
T ss_dssp --EEEEEETTTT-EEEEEEC-SSC-CSSSCCCEEEECSSSCEEEECCTT---------SCEEEEETTTCCE
T ss_pred --eEEEEECCCC-cEEEEEE-ecC-CceEEEEEEEEeCCCcEEEEECCC---------CEEEEEECCCchh
Confidence 2344444332 2221111 111 111111 1222357778888753 3488999988753
No 112
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=88.12 E-value=21 Score=38.79 Aligned_cols=183 Identities=11% Similarity=-0.020 Sum_probs=86.0
Q ss_pred ccCeEEEEECCCCcEEEecCCCCCCC-----------CCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceE
Q 001895 148 ATADVHCYDVLTNKWSRITPFGEPPT-----------PRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWH 216 (999)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~-----------pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~ 216 (999)
....+..||+.+.+....-.....+. ...-.+++...+..++.|+.. ..+++||+.+......
T Consensus 169 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------g~i~~~d~~~~~~~~~ 242 (425)
T 1r5m_A 169 VENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPK------GAIFVYQITEKTPTGK 242 (425)
T ss_dssp TTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGG------GCEEEEETTCSSCSEE
T ss_pred cCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCC------CeEEEEEcCCCceeee
Confidence 44578889998776544332211110 000222333333345555542 5799999987532222
Q ss_pred EEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEE
Q 001895 217 RVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLL 296 (999)
Q Consensus 217 ~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~Lyv 296 (999)
+. .....-.+++...++.+++.|+.++ .+..||+.+........... ..........++ +++
T Consensus 243 -~~-----~~~~~i~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~~~~------~~i~~~~~~~~~-~l~ 304 (425)
T 1r5m_A 243 -LI-----GHHGPISVLEFNDTNKLLLSASDDG-----TLRIWHGGNGNSQNCFYGHS------QSIVSASWVGDD-KVI 304 (425)
T ss_dssp -EC-----CCSSCEEEEEEETTTTEEEEEETTS-----CEEEECSSSBSCSEEECCCS------SCEEEEEEETTT-EEE
T ss_pred -ec-----cCCCceEEEEECCCCCEEEEEcCCC-----EEEEEECCCCccceEecCCC------ccEEEEEECCCC-EEE
Confidence 21 1111223344444445777777655 57888887653223221111 112222333356 666
Q ss_pred EeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCe
Q 001895 297 CGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (999)
Q Consensus 297 fGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~ 374 (999)
.|+.++ .+..++..+. +-...... ....-.++++. ++.++++|+.+ ..|.+||+.+..
T Consensus 305 ~~~~d~------~i~i~d~~~~-~~~~~~~~----~~~~i~~~~~s~~~~~l~~~~~d---------g~i~i~~~~~~~ 363 (425)
T 1r5m_A 305 SCSMDG------SVRLWSLKQN-TLLALSIV----DGVPIFAGRISQDGQKYAVAFMD---------GQVNVYDLKKLN 363 (425)
T ss_dssp EEETTS------EEEEEETTTT-EEEEEEEC----TTCCEEEEEECTTSSEEEEEETT---------SCEEEEECHHHH
T ss_pred EEeCCC------cEEEEECCCC-cEeEeccc----CCccEEEEEEcCCCCEEEEEECC---------CeEEEEECCCCc
Confidence 666543 3444554433 22222111 11112233333 46677777643 348888887654
No 113
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=88.12 E-value=15 Score=39.37 Aligned_cols=201 Identities=12% Similarity=0.095 Sum_probs=91.8
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEe---ecCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVV---VQGPG 224 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~---~~g~~ 224 (999)
..++.||+.+.+++.+.... .....-..++.. +..||+.+.. ...+.+||+... .+...+. ..+..
T Consensus 63 ~~v~~~~~~~g~~~~~~~~~--~~~~~p~~~a~spdg~~l~~~~~~------~~~v~v~~~~~~-g~~~~~~~~~~~~~~ 133 (347)
T 3hfq_A 63 GGIAAWQIDGQTAHKLNTVV--APGTPPAYVAVDEARQLVYSANYH------KGTAEVMKIAAD-GALTLTDTVQHSGHG 133 (347)
T ss_dssp EEEEEEEEETTEEEEEEEEE--EESCCCSEEEEETTTTEEEEEETT------TTEEEEEEECTT-SCEEEEEEEECCCCC
T ss_pred ceEEEEEecCCcEEEeeeee--cCCCCCEEEEECCCCCEEEEEeCC------CCEEEEEEeCCC-CCeeecceeecCCCC
Confidence 47899999888877665421 011112233333 3366666532 246888888632 1233332 22223
Q ss_pred CCCC----cccEEEEECCcEEEEEccCCCCCCCCeEEEEECC-CCCceEEEcccCCCCCCCccceEEEEEeCCE-EEEEe
Q 001895 225 PGPR----YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTA-AKPYEWRKLEPEGEGPPPCMYATASARSDGL-LLLCG 298 (999)
Q Consensus 225 P~~R----~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~-s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~-LyvfG 298 (999)
|..| .-+.+++-.++++|+.+..+ +.+++||+. +. +...+......+...- ...+...+++ +|+.+
T Consensus 134 p~~~~~~~~~~~~~~spdg~l~v~~~~~-----~~v~~~~~~~~g--~~~~~~~~~~~~g~~p-~~~~~spdg~~l~v~~ 205 (347)
T 3hfq_A 134 PRPEQDGSHIHYTDLTPDNRLAVIDLGS-----DKVYVYNVSDAG--QLSEQSVLTMEAGFGP-RHLVFSPDGQYAFLAG 205 (347)
T ss_dssp SSTTCSSCCEEEEEECTTSCEEEEETTT-----TEEEEEEECTTS--CEEEEEEEECCTTCCE-EEEEECTTSSEEEEEE
T ss_pred CCccccCCCceEEEECCCCcEEEEeCCC-----CEEEEEEECCCC--cEEEeeeEEcCCCCCC-ceEEECCCCCEEEEEe
Confidence 3222 23445555444677665433 378889987 44 4443321111111011 1223334554 77665
Q ss_pred ccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCC----cceeEEEEE-CC-EEEEEcCcCCCCCCcccCCeEEEEECC-
Q 001895 299 GRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSP----RYQHAAVFV-NA-RLHVSGGALGGGRMVEDSSSVAVLDTA- 371 (999)
Q Consensus 299 G~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~----R~~hsav~~-~~-~L~V~GG~~~~~~~~~~~~~v~vyD~~- 371 (999)
..++ ...+|.++.. ++++.........|.. .....+++. ++ .|||.+.. .+.|.+||+.
T Consensus 206 ~~~~----~v~v~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~---------~~~v~v~~~~~ 271 (347)
T 3hfq_A 206 ELSS----QIASLKYDTQ-TGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRG---------YNTLAVFAVTA 271 (347)
T ss_dssp TTTT----EEEEEEEETT-TTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEET---------TTEEEEEEECG
T ss_pred CCCC----EEEEEEecCC-CCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCC---------CCEEEEEEECC
Confidence 4321 2234444432 3344332221111211 122233333 44 57776532 3458888876
Q ss_pred CCeEEEcccC
Q 001895 372 AGVWCDTKSV 381 (999)
Q Consensus 372 t~~W~~v~~~ 381 (999)
++++..+...
T Consensus 272 ~g~~~~~~~~ 281 (347)
T 3hfq_A 272 DGHLTLIQQI 281 (347)
T ss_dssp GGCEEEEEEE
T ss_pred CCcEEEeEEE
Confidence 3355555443
No 114
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=88.04 E-value=0.15 Score=56.71 Aligned_cols=68 Identities=9% Similarity=0.048 Sum_probs=39.6
Q ss_pred CeEEEecCCCCHHH-------HHHHHHHhCCCCCCCCccceeEEEeccccCCCCChH------HHHHHHHHhh-hcCCCC
Q 001895 699 PIKIFGDLHGQFGD-------LMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSL------ETITLLLALK-VEYPNN 764 (999)
Q Consensus 699 ~i~vvGDiHG~~~~-------L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~------evl~ll~~lk-~~~P~~ 764 (999)
++++|||.|.-... |.++.+.. ..+ -+|++||+++.|..+. +.+..++... ....--
T Consensus 5 ~f~~igD~g~g~~~q~~va~~m~~~~~~~---~pd------~vl~~GD~~y~G~~~~~d~~~~~~f~~~~~~~~~~~~~P 75 (342)
T 3tgh_A 5 RFASLGDWGKDTKGQILNAKYFKQFIKNE---RVT------FIVSPGSNFIDGVKGLNDPAWKNLYEDVYSEEKGDMYMP 75 (342)
T ss_dssp EEEECCSCBSCCHHHHHHHHHHHHHHHHT---TCC------EEEECSCSBTTCCCSTTCTHHHHHTTTTSCCGGGTTCSE
T ss_pred EEEEEecCCCCCchHHHHHHHHHHHHhhc---CCC------EEEECCCcccCCCCcCccHHHHHHHHHHhhhhhhhhCCC
Confidence 58999999975432 22223221 112 5888999998887432 2222222211 122234
Q ss_pred EEEecCCcccc
Q 001895 765 VHLIRGNHEAA 775 (999)
Q Consensus 765 v~llrGNHE~~ 775 (999)
++.+.||||..
T Consensus 76 ~~~vlGNHD~~ 86 (342)
T 3tgh_A 76 FFTVLGTRDWT 86 (342)
T ss_dssp EEECCCHHHHT
T ss_pred EEEeCCCCccC
Confidence 79999999986
No 115
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=87.74 E-value=31 Score=36.51 Aligned_cols=191 Identities=8% Similarity=0.011 Sum_probs=88.0
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
.+.+||+.+.+-...-.. ....-..+.+ ++..++.|+.+ ..+.+||+.+.. ...... ...
T Consensus 55 ~i~vwd~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~l~s~~~d------g~i~iwd~~~~~--~~~~~~-----~~~ 116 (369)
T 3zwl_B 55 SASVWYSLNGERLGTLDG-----HTGTIWSIDVDCFTKYCVTGSAD------YSIKLWDVSNGQ--CVATWK-----SPV 116 (369)
T ss_dssp CEEEEETTTCCEEEEECC-----CSSCEEEEEECTTSSEEEEEETT------TEEEEEETTTCC--EEEEEE-----CSS
T ss_pred EEEEEeCCCchhhhhhhh-----cCCcEEEEEEcCCCCEEEEEeCC------CeEEEEECCCCc--EEEEee-----cCC
Confidence 678889887654433211 1111222222 34566666642 579999998753 222221 111
Q ss_pred cccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCC--ceEEEcccCCC-----CCCCccceEEEEEeCCEEEEEeccC
Q 001895 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKP--YEWRKLEPEGE-----GPPPCMYATASARSDGLLLLCGGRD 301 (999)
Q Consensus 229 ~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~--~~W~~v~~~~~-----~P~~r~~~~a~~~~~~~LyvfGG~~ 301 (999)
.-.+++...++..++.++.+.......+..||+.+.. ..+........ ..............++.+++.|+.+
T Consensus 117 ~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 196 (369)
T 3zwl_B 117 PVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKD 196 (369)
T ss_dssp CEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETT
T ss_pred CeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCC
Confidence 2233334444456666655422233467777765431 12222211100 0000011222233356677777654
Q ss_pred CCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEc
Q 001895 302 ASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (999)
Q Consensus 302 ~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v 378 (999)
+ .+..++....+........ ....-.++++. ++.+++.|+. ...|.+||+.+.+....
T Consensus 197 g------~i~i~d~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~---------d~~i~v~d~~~~~~~~~ 255 (369)
T 3zwl_B 197 G------KISKYDVSNNYEYVDSIDL----HEKSISDMQFSPDLTYFITSSR---------DTNSFLVDVSTLQVLKK 255 (369)
T ss_dssp S------EEEEEETTTTTEEEEEEEC----CSSCEEEEEECTTSSEEEEEET---------TSEEEEEETTTCCEEEE
T ss_pred C------EEEEEECCCCcEeEEEEec----CCCceeEEEECCCCCEEEEecC---------CceEEEEECCCCceeee
Confidence 3 3455555542222222111 11112233333 5666777764 24589999988765443
No 116
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=87.70 E-value=19 Score=39.92 Aligned_cols=95 Identities=13% Similarity=0.145 Sum_probs=52.3
Q ss_pred ccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCC
Q 001895 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (999)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P 225 (999)
.-+.|+++|..+++...+-... .....-.++.+ ++.+++.|+.+ ..+.+||+.+.. -.... .
T Consensus 123 ld~tV~lWd~~tg~~~~~~~~~---~~~~~V~sv~fspdg~~lasgs~D------g~v~iWd~~~~~--~~~~~-----~ 186 (420)
T 4gga_A 123 LDNSVYLWSASSGDILQLLQME---QPGEYISSVAWIKEGNYLAVGTSS------AEVQLWDVQQQK--RLRNM-----T 186 (420)
T ss_dssp ETTEEEEEETTTCCEEEEEECC---STTCCEEEEEECTTSSEEEEEETT------SCEEEEETTTTE--EEEEE-----C
T ss_pred eCCEEEEEECCCCCEEEEEEec---CCCCcEEEEEECCCCCEEEEEECC------CeEEEEEcCCCc--EEEEE-----e
Confidence 3458999999998876654321 11111222333 44666777642 578999998752 22111 1
Q ss_pred CCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCC
Q 001895 226 GPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 226 ~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
.......+...++ .+++.|+.++ .++.+|....
T Consensus 187 ~h~~~v~~~s~~~-~~l~sgs~d~-----~i~~~d~~~~ 219 (420)
T 4gga_A 187 SHSARVGSLSWNS-YILSSGSRSG-----HIHHHDVRVA 219 (420)
T ss_dssp CCSSCEEEEEEET-TEEEEEETTS-----EEEEEETTSS
T ss_pred CCCCceEEEeeCC-CEEEEEeCCC-----ceeEeeeccc
Confidence 1122223334444 5777777664 5677777654
No 117
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=87.41 E-value=35 Score=36.83 Aligned_cols=199 Identities=9% Similarity=0.054 Sum_probs=91.3
Q ss_pred eEEEEECCCCc------EEEecCCCCCCC-CCcCcEEEEe-----CCEE-EEEcccCCCCCCcCcEEEEecCC------C
Q 001895 151 DVHCYDVLTNK------WSRITPFGEPPT-PRAAHVATAV-----GTMV-VIQGGIGPAGLSAEDLHVLDLTQ------Q 211 (999)
Q Consensus 151 dv~~yD~~t~~------W~~l~~~g~~P~-pR~~hsa~~~-----g~~i-yv~GG~~~~~~~~~dv~vyD~~t------~ 211 (999)
.+.+||+.+.. +..+..... .. ...-.+++.. ++.. ++.|+.+ ..+.+||+.+ .
T Consensus 92 ~i~iw~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~ 164 (397)
T 1sq9_A 92 DLLFYRITREDETKKVIFEKLDLLDS-DMKKHSFWALKWGASNDRLLSHRLVATDVK------GTTYIWKFHPFADESNS 164 (397)
T ss_dssp CEEEEEEEECTTTCCEEEEEECCSCT-TGGGSCEEEEEEECCC----CEEEEEEETT------SCEEEEEEESSSSHHHH
T ss_pred CEEEEEccCCcccccccceeeccccc-ccCCCcEEEEEEeeccCCCCceEEEEEeCC------CcEEEEeCCcccccccc
Confidence 67788887766 776654310 00 0112233333 2344 6666642 5688888876 2
Q ss_pred C-CceE---EEee--cCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCC--CCCCCccc
Q 001895 212 R-PRWH---RVVV--QGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEG--EGPPPCMY 283 (999)
Q Consensus 212 t-~kW~---~v~~--~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~--~~P~~r~~ 283 (999)
. .+|. .+.. .........-.+++...++ +++.|+.++ .+..||+.+. +....-... ..+.....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg-----~i~i~d~~~~--~~~~~~~~~~~h~~~~~~i 236 (397)
T 1sq9_A 165 LTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNG-----TVQISELSTL--RPLYNFESQHSMINNSNSI 236 (397)
T ss_dssp TTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTS-----EEEEEETTTT--EEEEEEECCC---CCCCCE
T ss_pred ceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCC-----cEEEEECCCC--ceeEEEeccccccccCCcc
Confidence 1 1222 1110 0001122233455555666 777777665 6889999876 332221110 00000112
Q ss_pred eEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCC---------CCcceeEEEEE-CCEEEEEcCcC
Q 001895 284 ATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSP---------SPRYQHAAVFV-NARLHVSGGAL 353 (999)
Q Consensus 284 ~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P---------~~R~~hsav~~-~~~L~V~GG~~ 353 (999)
.......++.+++.|+.++. ...+..++..+. .-.........+ ....-.++++. ++.+++.|+.
T Consensus 237 ~~i~~~~~~~~l~~~~~d~~---~g~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~- 311 (397)
T 1sq9_A 237 RSVKFSPQGSLLAIAHDSNS---FGCITLYETEFG-ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGW- 311 (397)
T ss_dssp EEEEECSSTTEEEEEEEETT---EEEEEEEETTTC-CEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEET-
T ss_pred ceEEECCCCCEEEEEecCCC---CceEEEEECCCC-cccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeC-
Confidence 22223335677777765411 123455554433 211111110000 11112233333 4667777764
Q ss_pred CCCCCcccCCeEEEEECCCCeEEE
Q 001895 354 GGGRMVEDSSSVAVLDTAAGVWCD 377 (999)
Q Consensus 354 ~~~~~~~~~~~v~vyD~~t~~W~~ 377 (999)
...|.+||+.+.+-..
T Consensus 312 --------dg~i~iwd~~~~~~~~ 327 (397)
T 1sq9_A 312 --------DGKLRFWDVKTKERIT 327 (397)
T ss_dssp --------TSEEEEEETTTTEEEE
T ss_pred --------CCeEEEEEcCCCceeE
Confidence 2458899998876443
No 118
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=87.34 E-value=26 Score=41.76 Aligned_cols=160 Identities=12% Similarity=0.029 Sum_probs=74.8
Q ss_pred cCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCC
Q 001895 200 AEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPP 279 (999)
Q Consensus 200 ~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~ 279 (999)
...++++|+.+.. ...+.. + .....+-..++...+++.++++..+.......++.+|+.+.. .+..+........
T Consensus 234 ~~~l~~~d~~~~~--~~~~~~-~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~-~~~~~~~~~~~~~ 308 (706)
T 2z3z_A 234 HVTVGIYHLATGK--TVYLQT-G-EPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR-FVRTLFVETDKHY 308 (706)
T ss_dssp EEEEEEEETTTTE--EEECCC-C-SCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC-EEEEEEEEECSSC
T ss_pred eeEEEEEECCCCc--eEeecc-C-CCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc-eeeEEEEccCCCe
Confidence 3579999998742 333321 0 111122223333334444455544444445689999997751 3333321111000
Q ss_pred CccceEEEEEe--CCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeE-EEEE-C-CEEEEEcCcCC
Q 001895 280 PCMYATASARS--DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHA-AVFV-N-ARLHVSGGALG 354 (999)
Q Consensus 280 ~r~~~~a~~~~--~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs-av~~-~-~~L~V~GG~~~ 354 (999)
........... ++++++.+..++ ...+|.++.... . ....... ...... .++. + ..||+.+..++
T Consensus 309 ~~~~~~~~~sp~~dg~~l~~~~~~g----~~~l~~~~~~~~-~--~~~l~~~---~~~v~~~~~~spdg~~l~~~~~~~~ 378 (706)
T 2z3z_A 309 VEPLHPLTFLPGSNNQFIWQSRRDG----WNHLYLYDTTGR-L--IRQVTKG---EWEVTNFAGFDPKGTRLYFESTEAS 378 (706)
T ss_dssp CCCCSCCEECTTCSSEEEEEECTTS----SCEEEEEETTSC-E--EEECCCS---SSCEEEEEEECTTSSEEEEEESSSC
T ss_pred ECccCCceeecCCCCEEEEEEccCC----ccEEEEEECCCC-E--EEecCCC---CeEEEeeeEEcCCCCEEEEEecCCC
Confidence 00011223334 777666665543 356777764332 2 2223211 111112 2222 3 35666554422
Q ss_pred CCCCcccCCeEEEEECCCCeEEEcc
Q 001895 355 GGRMVEDSSSVAVLDTAAGVWCDTK 379 (999)
Q Consensus 355 ~~~~~~~~~~v~vyD~~t~~W~~v~ 379 (999)
.. ...||.+|+.+.+...+.
T Consensus 379 ~~-----~~~l~~~d~~~~~~~~l~ 398 (706)
T 2z3z_A 379 PL-----ERHFYCIDIKGGKTKDLT 398 (706)
T ss_dssp TT-----CBEEEEEETTCCCCEESC
T ss_pred Cc-----eEEEEEEEcCCCCceecc
Confidence 11 346999999888766554
No 119
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=87.01 E-value=11 Score=41.16 Aligned_cols=191 Identities=13% Similarity=0.050 Sum_probs=88.0
Q ss_pred CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEE--CCcEEEEEccCCCCCCCCeEEEEEC
Q 001895 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV--GQRYLMAIGGNDGKRPLADVWALDT 261 (999)
Q Consensus 184 g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~--~~~~Lyv~GG~~g~~~~ndv~~yDl 261 (999)
+++.++.|+.+ ..+.+||+.+.. .+.. +......-..+.+ .+..+++.|+.|+ .+..||+
T Consensus 138 dg~~l~sgs~d------~~i~iwd~~~~~----~~~~---~~~h~~~V~~~~~~~~~~~~l~s~s~D~-----~v~iwd~ 199 (344)
T 4gqb_B 138 SGTQAVSGSKD------ICIKVWDLAQQV----VLSS---YRAHAAQVTCVAASPHKDSVFLSCSEDN-----RILLWDT 199 (344)
T ss_dssp TSSEEEEEETT------SCEEEEETTTTE----EEEE---ECCCSSCEEEEEECSSCTTEEEEEETTS-----CEEEEET
T ss_pred CCCEEEEEeCC------CeEEEEECCCCc----EEEE---EcCcCCceEEEEecCCCCCceeeecccc-----ccccccc
Confidence 45666777642 468999998742 2221 1111111112222 2325777787775 5788899
Q ss_pred CCCCceEEEcccCCCCCCCccceEEEEE--eCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEE
Q 001895 262 AAKPYEWRKLEPEGEGPPPCMYATASAR--SDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAA 339 (999)
Q Consensus 262 ~s~~~~W~~v~~~~~~P~~r~~~~a~~~--~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsa 339 (999)
.+.. .-..+..... .....++.. .++.+++.|+.++. +..++..+.....-.. + ....-.++
T Consensus 200 ~~~~-~~~~~~~~~~----~~~~~~~~~~p~~~~~l~sg~~dg~------v~~wd~~~~~~~~~~~--~---h~~~v~~v 263 (344)
T 4gqb_B 200 RCPK-PASQIGCSAP----GYLPTSLAWHPQQSEVFVFGDENGT------VSLVDTKSTSCVLSSA--V---HSQCVTGL 263 (344)
T ss_dssp TSSS-CEEECC--------CCCEEEEEECSSCTTEEEEEETTSE------EEEEESCC--CCEEEE--C---CSSCEEEE
T ss_pred cccc-eeeeeeccee----eccceeeeecCCCCcceEEeccCCc------EEEEECCCCcEEEEEc--C---CCCCEEEE
Confidence 7762 1122211111 111222222 25677888876542 3333333221001011 1 11112233
Q ss_pred EEE-C-CEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccCcCCCCCCCcccccCCCCCccCCCCcceeEEEEE--C
Q 001895 340 VFV-N-ARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAV--G 415 (999)
Q Consensus 340 v~~-~-~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~--~ 415 (999)
++. + .++++.|+.++ .|.+||..+.+-..+... ...-.+++.- +
T Consensus 264 ~fsp~g~~~lasgs~D~---------~i~vwd~~~~~~~~~~~H-----------------------~~~V~~v~~sp~~ 311 (344)
T 4gqb_B 264 VFSPHSVPFLASLSEDC---------SLAVLDSSLSELFRSQAH-----------------------RDFVRDATWSPLN 311 (344)
T ss_dssp EECSSSSCCEEEEETTS---------CEEEECTTCCEEEEECCC-----------------------SSCEEEEEECSSS
T ss_pred EEccCCCeEEEEEeCCC---------eEEEEECCCCcEEEEcCC-----------------------CCCEEEEEEeCCC
Confidence 443 3 35777777533 388899988864433211 1111223222 4
Q ss_pred CEEEEEcCCCCCcCcCcEEEeecccccc
Q 001895 416 DLIFIYGGLRGGVLLDDLLVAEDLAAAE 443 (999)
Q Consensus 416 ~~LyV~GG~~~~~~l~Dv~~ld~~~~~~ 443 (999)
..|++-||.++... +|.++..+++.
T Consensus 312 ~~llas~s~D~~v~---~w~v~~~~~~~ 336 (344)
T 4gqb_B 312 HSLLTTVGWDHQVV---HHVVPTEPLPA 336 (344)
T ss_dssp TTEEEEEETTSCEE---EEECCC-----
T ss_pred CeEEEEEcCCCeEE---EEECCCCCCCC
Confidence 56888888876543 56666555443
No 120
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=86.80 E-value=0.37 Score=56.93 Aligned_cols=67 Identities=13% Similarity=0.107 Sum_probs=42.5
Q ss_pred CCeEEEecCCCCHH----------------HHHHHHHHhCCCCCCCCccceeEEEeccccCCCCCh----------HHHH
Q 001895 698 APIKIFGDLHGQFG----------------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS----------LETI 751 (999)
Q Consensus 698 ~~i~vvGDiHG~~~----------------~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s----------~evl 751 (999)
-.|+.++|+||++. .|..+++...-... ..-+|..||.++..+.+ ..++
T Consensus 20 l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~-----~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~~ 94 (527)
T 3qfk_A 20 IAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYD-----QSFKIDNGDFLQGSPFCNYLIAHSGSSQPLV 94 (527)
T ss_dssp EEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSS-----EEEEEECSCCSSSSHHHHHHHHTTCSSHHHH
T ss_pred EEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCC-----CEEEEECCCcCCCcHHHHHHhhcccCcchHH
Confidence 45889999999863 56666666532211 11345579999987543 3555
Q ss_pred HHHHHhhhcCCCCEEEecCCccc
Q 001895 752 TLLLALKVEYPNNVHLIRGNHEA 774 (999)
Q Consensus 752 ~ll~~lk~~~P~~v~llrGNHE~ 774 (999)
.+|-.+.. -++..||||.
T Consensus 95 ~~ln~lg~-----D~~t~GNHef 112 (527)
T 3qfk_A 95 DFYNRMAF-----DFGTLGNHEF 112 (527)
T ss_dssp HHHHHTCC-----CEECCCGGGG
T ss_pred HHHHhcCC-----cEEecccccc
Confidence 66655532 2456899995
No 121
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=86.72 E-value=17 Score=40.62 Aligned_cols=147 Identities=12% Similarity=0.101 Sum_probs=72.2
Q ss_pred CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCC
Q 001895 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (999)
Q Consensus 184 g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s 263 (999)
++..++.|+.+ ..+.+||+.+.. -...- ......-.+..+++ .+++.|+.++ .+..||+.+
T Consensus 142 d~~~l~~g~~d------g~i~iwd~~~~~--~~~~~-----~~h~~~v~~l~~~~-~~l~sg~~dg-----~i~vwd~~~ 202 (435)
T 1p22_A 142 DDQKIVSGLRD------NTIKIWDKNTLE--CKRIL-----TGHTGSVLCLQYDE-RVIITGSSDS-----TVRVWDVNT 202 (435)
T ss_dssp CSSEEEEEESS------SCEEEEESSSCC--EEEEE-----CCCSSCEEEEECCS-SEEEEEETTS-----CEEEEESSS
T ss_pred CCCEEEEEeCC------CeEEEEeCCCCe--EEEEE-----cCCCCcEEEEEECC-CEEEEEcCCC-----eEEEEECCC
Confidence 55566666642 579999988753 22211 11122223334455 5778888776 588899987
Q ss_pred CCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEE-EECCCCCCCCcceeEEEEE
Q 001895 264 KPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEW-AIAPGVSPSPRYQHAAVFV 342 (999)
Q Consensus 264 ~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w-~~~~g~~P~~R~~hsav~~ 342 (999)
.....+. .. . .....++.. ++.+++.|+.++. +..++......... ....+. .....++..
T Consensus 203 ~~~~~~~-~~-h-----~~~v~~l~~-~~~~l~s~s~dg~------i~vwd~~~~~~~~~~~~~~~~----~~~v~~~~~ 264 (435)
T 1p22_A 203 GEMLNTL-IH-H-----CEAVLHLRF-NNGMMVTCSKDRS------IAVWDMASPTDITLRRVLVGH----RAAVNVVDF 264 (435)
T ss_dssp CCEEEEE-CC-C-----CSCEEEEEC-CTTEEEEEETTSC------EEEEECSSSSCCEEEEEECCC----SSCEEEEEE
T ss_pred CcEEEEE-cC-C-----CCcEEEEEE-cCCEEEEeeCCCc------EEEEeCCCCCCceeeeEecCC----CCcEEEEEe
Confidence 7322221 11 1 112223333 4446666775542 33333332211111 111111 111222333
Q ss_pred CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEE
Q 001895 343 NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (999)
Q Consensus 343 ~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~ 376 (999)
++..++.|+.+ ..|.+||+.+.+-.
T Consensus 265 ~~~~l~s~~~d---------g~i~vwd~~~~~~~ 289 (435)
T 1p22_A 265 DDKYIVSASGD---------RTIKVWNTSTCEFV 289 (435)
T ss_dssp ETTEEEEEETT---------SEEEEEETTTCCEE
T ss_pred CCCEEEEEeCC---------CeEEEEECCcCcEE
Confidence 66666776642 35889999887543
No 122
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=86.71 E-value=36 Score=36.25 Aligned_cols=149 Identities=14% Similarity=0.182 Sum_probs=75.9
Q ss_pred CEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCC
Q 001895 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
+.+++.|+. ...+.+||+.+.. .-..+. ..+ ..-.+++...++.+++.|+.++ .+..||+.+.
T Consensus 92 ~~~l~s~s~------D~~i~lWd~~~~~-~~~~~~---~~~--~~~~~~~~spdg~~l~~g~~dg-----~v~i~~~~~~ 154 (321)
T 3ow8_A 92 LPIAASSSL------DAHIRLWDLENGK-QIKSID---AGP--VDAWTLAFSPDSQYLATGTHVG-----KVNIFGVESG 154 (321)
T ss_dssp SSEEEEEET------TSEEEEEETTTTE-EEEEEE---CCT--TCCCCEEECTTSSEEEEECTTS-----EEEEEETTTC
T ss_pred CCEEEEEeC------CCcEEEEECCCCC-EEEEEe---CCC--ccEEEEEECCCCCEEEEEcCCC-----cEEEEEcCCC
Confidence 356666664 2578999998752 112222 111 1122344444446777777654 5788888876
Q ss_pred CceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-C
Q 001895 265 PYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-N 343 (999)
Q Consensus 265 ~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~ 343 (999)
...+...... ......+...++++++.|+.++. +..++..+. +-.... .+. ...-.++++. +
T Consensus 155 ~~~~~~~~~~------~~v~~~~~spdg~~lasg~~dg~------i~iwd~~~~-~~~~~~-~~h---~~~v~~l~~spd 217 (321)
T 3ow8_A 155 KKEYSLDTRG------KFILSIAYSPDGKYLASGAIDGI------INIFDIATG-KLLHTL-EGH---AMPIRSLTFSPD 217 (321)
T ss_dssp SEEEEEECSS------SCEEEEEECTTSSEEEEEETTSC------EEEEETTTT-EEEEEE-CCC---SSCCCEEEECTT
T ss_pred ceeEEecCCC------ceEEEEEECCCCCEEEEEcCCCe------EEEEECCCC-cEEEEE-ccc---CCceeEEEEcCC
Confidence 3333322111 11222233346778888876543 344444433 221111 111 1111233333 5
Q ss_pred CEEEEEcCcCCCCCCcccCCeEEEEECCCCeEE
Q 001895 344 ARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (999)
Q Consensus 344 ~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~ 376 (999)
+.+++.|+.++ .|.+||+.+.+..
T Consensus 218 ~~~l~s~s~dg---------~i~iwd~~~~~~~ 241 (321)
T 3ow8_A 218 SQLLVTASDDG---------YIKIYDVQHANLA 241 (321)
T ss_dssp SCEEEEECTTS---------CEEEEETTTCCEE
T ss_pred CCEEEEEcCCC---------eEEEEECCCccee
Confidence 77888887533 3888999877644
No 123
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=86.49 E-value=36 Score=35.97 Aligned_cols=196 Identities=9% Similarity=0.021 Sum_probs=84.5
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCC--
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG-- 226 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~-- 226 (999)
..+.+||+.+.+........ . .-.+++.. ++..++.++.. .......+.+||+.+........... ..+.
T Consensus 96 g~i~iwd~~~~~~~~~~~~~---~--~v~~~~~~~~~~~l~~~~~~-~~~~~g~i~~~d~~~~~~~~~~~~~~-~~~~~~ 168 (369)
T 3zwl_B 96 YSIKLWDVSNGQCVATWKSP---V--PVKRVEFSPCGNYFLAILDN-VMKNPGSINIYEIERDSATHELTKVS-EEPIHK 168 (369)
T ss_dssp TEEEEEETTTCCEEEEEECS---S--CEEEEEECTTSSEEEEEECC-BTTBCCEEEEEEEEECTTTCCEEEEC-SSCSEE
T ss_pred CeEEEEECCCCcEEEEeecC---C--CeEEEEEccCCCEEEEecCC-ccCCCCEEEEEEecCCccceeecccc-cceeee
Confidence 47889999887654443221 1 11222222 33445554432 11223578888887542111111111 1110
Q ss_pred -----C-CcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEecc
Q 001895 227 -----P-RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 300 (999)
Q Consensus 227 -----~-R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~ 300 (999)
. ..-.+++...++.+++.|+.++ .+..||+.+..-....+..... .........++.+++.|+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~ 238 (369)
T 3zwl_B 169 IITHEGLDAATVAGWSTKGKYIIAGHKDG-----KISKYDVSNNYEYVDSIDLHEK-----SISDMQFSPDLTYFITSSR 238 (369)
T ss_dssp EECCTTCCCEEEEEECGGGCEEEEEETTS-----EEEEEETTTTTEEEEEEECCSS-----CEEEEEECTTSSEEEEEET
T ss_pred ccCCcCccceeEEEEcCCCCEEEEEcCCC-----EEEEEECCCCcEeEEEEecCCC-----ceeEEEECCCCCEEEEecC
Confidence 0 0222233333345667777664 6889999872112222222111 1222223336667777765
Q ss_pred CCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCc-----ccCCeEEEEECCCCe
Q 001895 301 DASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMV-----EDSSSVAVLDTAAGV 374 (999)
Q Consensus 301 ~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~-----~~~~~v~vyD~~t~~ 374 (999)
++ .+..++..+. ........ ......+++. ++..+++|+..+..... .....+.+||..+.+
T Consensus 239 d~------~i~v~d~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 306 (369)
T 3zwl_B 239 DT------NSFLVDVSTL-QVLKKYET-----DCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE 306 (369)
T ss_dssp TS------EEEEEETTTC-CEEEEEEC-----SSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCC
T ss_pred Cc------eEEEEECCCC-ceeeeecC-----CCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCc
Confidence 43 3444554433 22222111 1111222222 45566666543321100 012268888887775
No 124
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=86.40 E-value=35 Score=35.75 Aligned_cols=99 Identities=14% Similarity=0.076 Sum_probs=49.1
Q ss_pred eEEEEECC--CCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCC
Q 001895 151 DVHCYDVL--TNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (999)
Q Consensus 151 dv~~yD~~--t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~ 226 (999)
.+.+|++. +.++..+.... ....-..++.. +..+|+.+.. ...+++||+... .....+... +.
T Consensus 61 ~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~------~~~i~~~d~~~~-~~~~~~~~~---~~ 127 (343)
T 1ri6_A 61 RVLAYRIAPDDGALTFAAESA---LPGSLTHISTDHQGQFVFVGSYN------AGNVSVTRLEDG-LPVGVVDVV---EG 127 (343)
T ss_dssp EEEEEEECTTTCCEEEEEEEE---CSSCCSEEEECTTSSEEEEEETT------TTEEEEEEEETT-EEEEEEEEE---CC
T ss_pred eEEEEEecCCCCceeeccccc---cCCCCcEEEEcCCCCEEEEEecC------CCeEEEEECCCC-ccccccccc---cC
Confidence 56666665 77777664331 11122333333 3356665532 246889988521 112333221 12
Q ss_pred CCcccEEEEEC-CcEEEEEccCCCCCCCCeEEEEECCC-CCceEE
Q 001895 227 PRYGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAA-KPYEWR 269 (999)
Q Consensus 227 ~R~~h~~~v~~-~~~Lyv~GG~~g~~~~ndv~~yDl~s-~~~~W~ 269 (999)
...-+.++... +..||+.+..+ ..+.+||+.+ . ++.
T Consensus 128 ~~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~--~~~ 165 (343)
T 1ri6_A 128 LDGCHSANISPDNRTLWVPALKQ-----DRICLFTVSDDG--HLV 165 (343)
T ss_dssp CTTBCCCEECTTSSEEEEEEGGG-----TEEEEEEECTTS--CEE
T ss_pred CCCceEEEECCCCCEEEEecCCC-----CEEEEEEecCCC--cee
Confidence 22233344443 33677665333 3688999977 5 454
No 125
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=86.31 E-value=16 Score=37.22 Aligned_cols=198 Identities=8% Similarity=-0.098 Sum_probs=95.4
Q ss_pred eEEEEECCC-CcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCc
Q 001895 151 DVHCYDVLT-NKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (999)
Q Consensus 151 dv~~yD~~t-~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~ 229 (999)
.++++|+.+ .+...+.... ........+..-+++.+++++.... ....+|.+|..+.. ...+. .. . .
T Consensus 63 ~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~--~~~~l~~~~~~~~~--~~~~~---~~-~-~- 130 (297)
T 2ojh_A 63 LLYRLSLAGDPSPEKVDTGF--ATICNNDHGISPDGALYAISDKVEF--GKSAIYLLPSTGGT--PRLMT---KN-L-P- 130 (297)
T ss_dssp EEEEEESSSCCSCEECCCTT--CCCBCSCCEECTTSSEEEEEECTTT--SSCEEEEEETTCCC--CEECC---SS-S-S-
T ss_pred eEEEEeCCCCCCceEecccc--ccccccceEECCCCCEEEEEEeCCC--CcceEEEEECCCCc--eEEee---cC-C-C-
Confidence 789999998 7777664321 1112122222224455555543221 23578888887643 33332 11 1 1
Q ss_pred ccEEEEE-CCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEecc-CCCCCCc
Q 001895 230 GHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR-DASSVPL 307 (999)
Q Consensus 230 ~h~~~v~-~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~-~~~~~~~ 307 (999)
...++.. ++..|++.++.++. ..+|.+|+.+. ....+..... .........++..+++++. ++ .
T Consensus 131 ~~~~~~spdg~~l~~~~~~~~~---~~l~~~~~~~~--~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~~~~----~ 196 (297)
T 2ojh_A 131 SYWHGWSPDGKSFTYCGIRDQV---FDIYSMDIDSG--VETRLTHGEG-----RNDGPDYSPDGRWIYFNSSRTG----Q 196 (297)
T ss_dssp EEEEEECTTSSEEEEEEEETTE---EEEEEEETTTC--CEEECCCSSS-----CEEEEEECTTSSEEEEEECTTS----S
T ss_pred ccceEECCCCCEEEEEECCCCc---eEEEEEECCCC--cceEcccCCC-----ccccceECCCCCEEEEEecCCC----C
Confidence 2223333 33356655655442 47888888776 5655543322 1222233345554444443 32 3
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCc--ccCCeEEEEECCCCeEEEccc
Q 001895 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMV--EDSSSVAVLDTAAGVWCDTKS 380 (999)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~--~~~~~v~vyD~~t~~W~~v~~ 380 (999)
..+|.++.... ....... ........++. +++.+++++........ .....|+++|+.+.+...+..
T Consensus 197 ~~i~~~~~~~~---~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 266 (297)
T 2ojh_A 197 MQIWRVRVDGS---SVERITD---SAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFD 266 (297)
T ss_dssp CEEEEEETTSS---CEEECCC---CSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEE
T ss_pred ccEEEECCCCC---CcEEEec---CCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeec
Confidence 45777764433 2222221 11112222332 55555555543321100 012569999999988766554
No 126
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=86.29 E-value=26 Score=36.77 Aligned_cols=96 Identities=6% Similarity=0.007 Sum_probs=45.9
Q ss_pred CeEEEEECC-CCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCC
Q 001895 150 ADVHCYDVL-TNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (999)
Q Consensus 150 ~dv~~yD~~-t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~ 226 (999)
+.+++||+. +.++..+.... ....-+.++.. +..+|+.+.. ...+.+|++...+.++..+... +.
T Consensus 15 ~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~spdg~~l~~~~~~------~~~v~~~~~~~~~~~~~~~~~~---~~ 82 (343)
T 1ri6_A 15 QQIHVWNLNHEGALTLTQVVD---VPGQVQPMVVSPDKRYLYVGVRP------EFRVLAYRIAPDDGALTFAAES---AL 82 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEEE---CSSCCCCEEECTTSSEEEEEETT------TTEEEEEEECTTTCCEEEEEEE---EC
T ss_pred CeEEEEEECCCCcEEEeeeEe---cCCCCceEEECCCCCEEEEeecC------CCeEEEEEecCCCCceeecccc---cc
Confidence 467888874 45555443321 11122233333 3356655442 1578888887322346655422 11
Q ss_pred CCcccEEEEECC-cEEEEEccCCCCCCCCeEEEEECC
Q 001895 227 PRYGHVMALVGQ-RYLMAIGGNDGKRPLADVWALDTA 262 (999)
Q Consensus 227 ~R~~h~~~v~~~-~~Lyv~GG~~g~~~~ndv~~yDl~ 262 (999)
...-..++...+ ..||+.+..+ ..+..||+.
T Consensus 83 ~~~~~~~~~s~dg~~l~~~~~~~-----~~i~~~d~~ 114 (343)
T 1ri6_A 83 PGSLTHISTDHQGQFVFVGSYNA-----GNVSVTRLE 114 (343)
T ss_dssp SSCCSEEEECTTSSEEEEEETTT-----TEEEEEEEE
T ss_pred CCCCcEEEEcCCCCEEEEEecCC-----CeEEEEECC
Confidence 112233444433 3566655332 357788873
No 127
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=86.22 E-value=62 Score=39.02 Aligned_cols=179 Identities=11% Similarity=0.060 Sum_probs=85.6
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCc
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~ 229 (999)
.+.+||..++.....-.. .... -.+++.. ++..++.|+. ...+.+||+.+.. ....-. + ....
T Consensus 36 ~v~iwd~~~~~~~~~~~~---~~~~-v~~~~~s~~~~~l~~~~~------dg~i~vw~~~~~~--~~~~~~-~---~~~~ 99 (814)
T 3mkq_A 36 RVEIWNYETQVEVRSIQV---TETP-VRAGKFIARKNWIIVGSD------DFRIRVFNYNTGE--KVVDFE-A---HPDY 99 (814)
T ss_dssp EEEEEETTTTEEEEEEEC---CSSC-EEEEEEEGGGTEEEEEET------TSEEEEEETTTCC--EEEEEE-C---CSSC
T ss_pred EEEEEECCCCceEEEEec---CCCc-EEEEEEeCCCCEEEEEeC------CCeEEEEECCCCc--EEEEEe-c---CCCC
Confidence 788899888765443221 0111 1122222 3455666654 2579999998753 322211 1 1111
Q ss_pred ccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEe--CCEEEEEeccCCCCCCc
Q 001895 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS--DGLLLLCGGRDASSVPL 307 (999)
Q Consensus 230 ~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~--~~~LyvfGG~~~~~~~~ 307 (999)
-.+++...++..++.|+.++ .+..||+.+.. .....-.... ....++... ++.+++.|+.++
T Consensus 100 v~~~~~s~~~~~l~~~~~dg-----~i~vw~~~~~~-~~~~~~~~~~-----~~v~~~~~~p~~~~~l~~~~~dg----- 163 (814)
T 3mkq_A 100 IRSIAVHPTKPYVLSGSDDL-----TVKLWNWENNW-ALEQTFEGHE-----HFVMCVAFNPKDPSTFASGCLDR----- 163 (814)
T ss_dssp EEEEEECSSSSEEEEEETTS-----EEEEEEGGGTS-EEEEEEECCS-----SCEEEEEEETTEEEEEEEEETTS-----
T ss_pred EEEEEEeCCCCEEEEEcCCC-----EEEEEECCCCc-eEEEEEcCCC-----CcEEEEEEEcCCCCEEEEEeCCC-----
Confidence 22333333444666776654 57888886641 2222211111 112223332 567777777654
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE---CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeE
Q 001895 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV---NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (999)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~---~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W 375 (999)
.+..++.... ...+..... ....-..+++. ++.++++|+.+ ..|.+||+.+.+-
T Consensus 164 -~v~vwd~~~~-~~~~~~~~~---~~~~v~~~~~~~~~~~~~l~~~~~d---------g~i~~~d~~~~~~ 220 (814)
T 3mkq_A 164 -TVKVWSLGQS-TPNFTLTTG---QERGVNYVDYYPLPDKPYMITASDD---------LTIKIWDYQTKSC 220 (814)
T ss_dssp -EEEEEETTCS-SCSEEEECC---CTTCCCEEEECCSTTCCEEEEECTT---------SEEEEEETTTTEE
T ss_pred -eEEEEECCCC-cceeEEecC---CCCCEEEEEEEECCCCCEEEEEeCC---------CEEEEEECCCCcE
Confidence 2344443222 111111111 11112233333 56777777753 3588999988764
No 128
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=86.18 E-value=0.3 Score=57.44 Aligned_cols=71 Identities=20% Similarity=0.110 Sum_probs=41.5
Q ss_pred CCeEEEecCCCCHH----------HHHHHHHHhCCCCCCCCccceeEEEeccccCCCCC-----hHHHHHHHHHhhhcCC
Q 001895 698 APIKIFGDLHGQFG----------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQH-----SLETITLLLALKVEYP 762 (999)
Q Consensus 698 ~~i~vvGDiHG~~~----------~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~-----s~evl~ll~~lk~~~P 762 (999)
..|+.++|+||.+. .+..+++.+.-.... .....-+|..||+++..+. ...++.+|-.+.
T Consensus 9 l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~-~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~lg---- 83 (516)
T 1hp1_A 9 ITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAA-EGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG---- 83 (516)
T ss_dssp EEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHH-HTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHHT----
T ss_pred EEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhc-cCCCEEEEeCCccCCCcchhhhcCCcHHHHHHhccC----
Confidence 45889999999853 455555544210000 0000146779999976542 234556665553
Q ss_pred CCEEEecCCccc
Q 001895 763 NNVHLIRGNHEA 774 (999)
Q Consensus 763 ~~v~llrGNHE~ 774 (999)
-.++..||||.
T Consensus 84 -~d~~~~GNHEf 94 (516)
T 1hp1_A 84 -YDAMAIGNHEF 94 (516)
T ss_dssp -CCEEECCGGGG
T ss_pred -CCEEeeccccc
Confidence 23677899997
No 129
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=86.10 E-value=31 Score=42.13 Aligned_cols=188 Identities=12% Similarity=0.012 Sum_probs=98.0
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecC--CCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG--PGPG 226 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g--~~P~ 226 (999)
.-+++||+.+++++.+...+ .+. ..-.+.+.. ++.|++... ..+++||..+. +|....... ..+.
T Consensus 427 ~Gl~~~~~~~~~~~~~~~~~-~~~-~~v~~i~~d~~g~lwigt~--------~Gl~~~~~~~~--~~~~~~~~~~~~~~~ 494 (781)
T 3v9f_A 427 GNISYYNTRLKKFQIIELEK-NEL-LDVRVFYEDKNKKIWIGTH--------AGVFVIDLASK--KVIHHYDTSNSQLLE 494 (781)
T ss_dssp EEEEEECSSSCEEEECCSTT-TCC-CCEEEEEECTTSEEEEEET--------TEEEEEESSSS--SCCEEECTTTSSCSC
T ss_pred CCEEEEcCCCCcEEEeccCC-CCC-CeEEEEEECCCCCEEEEEC--------CceEEEeCCCC--eEEecccCccccccc
Confidence 57889999999888875321 111 112223333 347666432 35899998875 366654221 1111
Q ss_pred CCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEE-eCCEEEEEeccCCCCC
Q 001895 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASAR-SDGLLLLCGGRDASSV 305 (999)
Q Consensus 227 ~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~-~~~~LyvfGG~~~~~~ 305 (999)
..-.+++.-.++.||+..-. .-+++||+.+. +|+........|. ....++.. .++.||+...
T Consensus 495 -~~i~~i~~d~~g~lWigt~~------~Gl~~~~~~~~--~~~~~~~~~~l~~--~~i~~i~~d~~g~lWi~T~------ 557 (781)
T 3v9f_A 495 -NFVRSIAQDSEGRFWIGTFG------GGVGIYTPDMQ--LVRKFNQYEGFCS--NTINQIYRSSKGQMWLATG------ 557 (781)
T ss_dssp -SCEEEEEECTTCCEEEEESS------SCEEEECTTCC--EEEEECTTTTCSC--SCEEEEEECTTSCEEEEET------
T ss_pred -ceeEEEEEcCCCCEEEEEcC------CCEEEEeCCCC--eEEEccCCCCCCC--CeeEEEEECCCCCEEEEEC------
Confidence 11223333344467764321 23889999888 8877654222111 11122222 3578888532
Q ss_pred CcccE-EEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccC
Q 001895 306 PLASA-YGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (999)
Q Consensus 306 ~~~d~-~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~ 381 (999)
..+ +.|+..+. ++.......-.|.... .+++.- ++.||+.+. +.+.+||+++.++......
T Consensus 558 --~Glv~~~d~~~~-~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t~-----------~Gl~~~~~~~~~~~~~~~~ 620 (781)
T 3v9f_A 558 --EGLVCFPSARNF-DYQVFQRKEGLPNTHI-RAISEDKNGNIWASTN-----------TGISCYITSKKCFYTYDHS 620 (781)
T ss_dssp --TEEEEESCTTTC-CCEEECGGGTCSCCCC-CEEEECSSSCEEEECS-----------SCEEEEETTTTEEEEECGG
T ss_pred --CCceEEECCCCC-cEEEccccCCCCCceE-EEEEECCCCCEEEEcC-----------CceEEEECCCCceEEeccc
Confidence 123 45555433 3333322211222222 333333 577887642 2388999999998877543
No 130
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=85.11 E-value=35 Score=36.93 Aligned_cols=181 Identities=9% Similarity=0.016 Sum_probs=82.8
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCC----
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP---- 225 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P---- 225 (999)
.+.+||........+... ...-.+++.. ++..++.|+. ...+.+||+.+.. ....-.....+
T Consensus 131 ~i~i~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~------d~~i~iwd~~~~~--~~~~~~~~~~~~~~~ 197 (425)
T 1r5m_A 131 ELRLWNKTGALLNVLNFH-----RAPIVSVKWNKDGTHIISMDV------ENVTILWNVISGT--VMQHFELKETGGSSI 197 (425)
T ss_dssp CEEEEETTSCEEEEECCC-----CSCEEEEEECTTSSEEEEEET------TCCEEEEETTTTE--EEEEECCC-------
T ss_pred eEEEEeCCCCeeeeccCC-----CccEEEEEECCCCCEEEEEec------CCeEEEEECCCCc--EEEEeeccccCccce
Confidence 577788554444444321 1111222222 3455555553 2468899997742 22211110111
Q ss_pred -------CCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEe
Q 001895 226 -------GPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCG 298 (999)
Q Consensus 226 -------~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfG 298 (999)
....-.+++...++ .++.|+.++ .+..||+.+........... ..........++.+++.|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g-----~i~~~d~~~~~~~~~~~~~~------~~i~~~~~~~~~~~l~~~ 265 (425)
T 1r5m_A 198 NAENHSGDGSLGVDVEWVDDD-KFVIPGPKG-----AIFVYQITEKTPTGKLIGHH------GPISVLEFNDTNKLLLSA 265 (425)
T ss_dssp --------CCCBSCCEEEETT-EEEEECGGG-----CEEEEETTCSSCSEEECCCS------SCEEEEEEETTTTEEEEE
T ss_pred eeccccCCcceeeEEEEcCCC-EEEEEcCCC-----eEEEEEcCCCceeeeeccCC------CceEEEEECCCCCEEEEE
Confidence 00012333344443 466666654 68899998763222221111 112222333466677777
Q ss_pred ccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEE
Q 001895 299 GRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (999)
Q Consensus 299 G~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~ 377 (999)
+.++. +..++.... ....... .....-.++++. ++ +++.|+. ...|.+||+.+.+-..
T Consensus 266 ~~d~~------i~i~d~~~~-~~~~~~~----~~~~~i~~~~~~~~~-~l~~~~~---------d~~i~i~d~~~~~~~~ 324 (425)
T 1r5m_A 266 SDDGT------LRIWHGGNG-NSQNCFY----GHSQSIVSASWVGDD-KVISCSM---------DGSVRLWSLKQNTLLA 324 (425)
T ss_dssp ETTSC------EEEECSSSB-SCSEEEC----CCSSCEEEEEEETTT-EEEEEET---------TSEEEEEETTTTEEEE
T ss_pred cCCCE------EEEEECCCC-ccceEec----CCCccEEEEEECCCC-EEEEEeC---------CCcEEEEECCCCcEeE
Confidence 75442 333433321 1111111 111222344444 45 6666664 2458999998876443
No 131
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=84.84 E-value=41 Score=37.47 Aligned_cols=173 Identities=12% Similarity=0.053 Sum_probs=85.0
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
..+.+||+.+.+-...-.. ....-.+++.. ++..++.|+.+ ..+.+||+.+.. .+.. +....
T Consensus 290 ~~i~vwd~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~sg~~d------g~i~vwd~~~~~----~~~~---~~~h~ 352 (464)
T 3v7d_B 290 NTLIVWDVAQMKCLYILSG----HTDRIYSTIYDHERKRCISASMD------TTIRIWDLENGE----LMYT---LQGHT 352 (464)
T ss_dssp SCEEEEETTTTEEEEEECC----CSSCEEEEEEETTTTEEEEEETT------SCEEEEETTTTE----EEEE---ECCCS
T ss_pred CeEEEEECCCCcEEEEecC----CCCCEEEEEEcCCCCEEEEEeCC------CcEEEEECCCCc----EEEE---EeCCC
Confidence 3688899987754333211 11111222222 34556666642 469999998742 2221 11122
Q ss_pred cccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcc
Q 001895 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (999)
Q Consensus 229 ~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~ 308 (999)
..-....+.+ ..++.|+.++ .+..||+.+....+... .. ......+...++.+++.|+ ++
T Consensus 353 ~~v~~~~~~~-~~l~s~s~dg-----~v~vwd~~~~~~~~~~~--~~-----~~~~~~~~~~~~~~l~~~~-dg------ 412 (464)
T 3v7d_B 353 ALVGLLRLSD-KFLVSAAADG-----SIRGWDANDYSRKFSYH--HT-----NLSAITTFYVSDNILVSGS-EN------ 412 (464)
T ss_dssp SCEEEEEECS-SEEEEEETTS-----EEEEEETTTCCEEEEEE--CT-----TCCCEEEEEECSSEEEEEE-TT------
T ss_pred CcEEEEEEcC-CEEEEEeCCC-----cEEEEECCCCceeeeec--CC-----CCccEEEEEeCCCEEEEec-CC------
Confidence 2223344555 5677777665 58889998763233321 11 1223334455677777776 32
Q ss_pred cEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEEC
Q 001895 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDT 370 (999)
Q Consensus 309 d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~ 370 (999)
.+..++..+. +.....- .+....-.++++.++.+++.++.++ ..-++++|.
T Consensus 413 ~i~iwd~~~g---~~~~~~~-~~~~~~v~~v~~~~~~l~~~~~~~g-------~~~i~~ldf 463 (464)
T 3v7d_B 413 QFNIYNLRSG---KLVHANI-LKDADQIWSVNFKGKTLVAAVEKDG-------QSFLEILDF 463 (464)
T ss_dssp EEEEEETTTC---CEEESCT-TTTCSEEEEEEEETTEEEEEEEETT-------EEEEEEEEC
T ss_pred eEEEEECCCC---cEEehhh-ccCCCcEEEEEecCCEEEEEEEeCC-------eEEEEEeec
Confidence 2445554433 2222211 1122233445555666766666433 223666764
No 132
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=84.68 E-value=19 Score=39.01 Aligned_cols=201 Identities=12% Similarity=0.008 Sum_probs=94.2
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCC-EEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCc
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGT-MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~-~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~ 229 (999)
.+|.+|+.+.+...+.... .......+..-++ .|++... + ..++++|+.+.. -..+. ..|....
T Consensus 61 ~l~~~d~~~g~~~~lt~~~---~~~~~~~~~spdg~~l~~~~~-~------~~l~~~d~~~g~--~~~~~---~~~~~~~ 125 (388)
T 3pe7_A 61 NYYLLDLNTQVATQLTEGR---GDNTFGGFLSPDDDALFYVKD-G------RNLMRVDLATLE--ENVVY---QVPAEWV 125 (388)
T ss_dssp EEEEEETTTCEEEECCCSS---CBCSSSCEECTTSSEEEEEET-T------TEEEEEETTTCC--EEEEE---ECCTTEE
T ss_pred eEEEEeCCCCceEEeeeCC---CCCccceEEcCCCCEEEEEeC-C------CeEEEEECCCCc--ceeee---echhhcc
Confidence 7999999999888776431 1111111222234 4444432 1 479999998853 33333 2233322
Q ss_pred ccEEEE-ECCcEEEEE-c--cCC--------------CCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEe-
Q 001895 230 GHVMAL-VGQRYLMAI-G--GND--------------GKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS- 290 (999)
Q Consensus 230 ~h~~~v-~~~~~Lyv~-G--G~~--------------g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~- 290 (999)
...... -.++.+++. - +.+ .......++++|+.+. +-..+..... .........
T Consensus 126 ~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g--~~~~l~~~~~-----~~~~~~~sp~ 198 (388)
T 3pe7_A 126 GYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTG--ESTVILQENQ-----WLGHPIYRPY 198 (388)
T ss_dssp EEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTC--CEEEEEEESS-----CEEEEEEETT
T ss_pred cccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCC--ceEEeecCCc-----cccccEECCC
Confidence 222222 122222221 1 000 0112368999999887 5444432211 222333444
Q ss_pred CCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEE
Q 001895 291 DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLD 369 (999)
Q Consensus 291 ~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD 369 (999)
+++.++|............+|.++.... ........ .........++. +++.+++........ ...|+++|
T Consensus 199 dg~~l~~~~~~~~~~~~~~l~~~d~~~~---~~~~l~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~~----~~~l~~~d 270 (388)
T 3pe7_A 199 DDSTVAFCHEGPHDLVDARMWLINEDGT---NMRKVKTH-AEGESCTHEFWVPDGSALVYVSYLKGSP----DRFIYSAD 270 (388)
T ss_dssp EEEEEEEEECSCTTTSSCSEEEEETTSC---CCEESCCC-CTTEEEEEEEECTTSSCEEEEEEETTCC----CEEEEEEC
T ss_pred CCCEEEEEEecCCCCCcceEEEEeCCCC---ceEEeeeC-CCCcccccceECCCCCEEEEEecCCCCC----cceEEEEe
Confidence 5666655544322223457777776543 11222211 111111122232 454333322211110 12599999
Q ss_pred CCCCeEEEcccC
Q 001895 370 TAAGVWCDTKSV 381 (999)
Q Consensus 370 ~~t~~W~~v~~~ 381 (999)
+++++-..+...
T Consensus 271 ~~~g~~~~l~~~ 282 (388)
T 3pe7_A 271 PETLENRQLTSM 282 (388)
T ss_dssp TTTCCEEEEEEE
T ss_pred cCCCceEEEEcC
Confidence 999987766544
No 133
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=84.66 E-value=47 Score=35.70 Aligned_cols=114 Identities=5% Similarity=-0.034 Sum_probs=52.9
Q ss_pred CCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEe-CCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCC
Q 001895 253 LADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS-DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSP 331 (999)
Q Consensus 253 ~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~-~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P 331 (999)
...++.+|+.+. +...+.... .......... ++..+++............+|.++.... . +.......
T Consensus 167 ~~~l~~~d~~~g--~~~~~~~~~-----~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~-~--~~~l~~~~- 235 (396)
T 3c5m_A 167 TCRLIKVDIETG--ELEVIHQDT-----AWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGS-N--VRKIKEHA- 235 (396)
T ss_dssp CEEEEEEETTTC--CEEEEEEES-----SCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSC-C--CEESSCCC-
T ss_pred cceEEEEECCCC--cEEeeccCC-----cccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCC-c--eeEeeccC-
Confidence 457999999887 665554221 1222222333 3543333332221112246777776433 2 22222210
Q ss_pred CCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccC
Q 001895 332 SPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (999)
Q Consensus 332 ~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~ 381 (999)
........++. +++.+++........ ...|+++|+.+++...+...
T Consensus 236 ~~~~~~~~~~spdg~~l~~~~~~~~~~----~~~l~~~d~~~g~~~~l~~~ 282 (396)
T 3c5m_A 236 EGESCTHEFWIPDGSAMAYVSYFKGQT----DRVIYKANPETLENEEVMVM 282 (396)
T ss_dssp TTEEEEEEEECTTSSCEEEEEEETTTC----CEEEEEECTTTCCEEEEEEC
T ss_pred CCccccceEECCCCCEEEEEecCCCCc----cceEEEEECCCCCeEEeeeC
Confidence 11112222333 455444433222111 23499999999887776543
No 134
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=83.97 E-value=59 Score=36.26 Aligned_cols=63 Identities=16% Similarity=0.160 Sum_probs=35.5
Q ss_pred CEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCC
Q 001895 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
+.+++.|+.+ ..+.+||+.+.. .......+ ..... .+++..++ .+++.|+.++ .+..||+.+.
T Consensus 210 ~~~l~s~~~d------~~i~vwd~~~~~--~~~~~~~~--h~~~v-~~~~~sd~-~~l~s~~~d~-----~v~vwd~~~~ 272 (450)
T 2vdu_B 210 HQFIITSDRD------EHIKISHYPQCF--IVDKWLFG--HKHFV-SSICCGKD-YLLLSAGGDD-----KIFAWDWKTG 272 (450)
T ss_dssp CEEEEEEETT------SCEEEEEESCTT--CEEEECCC--CSSCE-EEEEECST-TEEEEEESSS-----EEEEEETTTC
T ss_pred CcEEEEEcCC------CcEEEEECCCCc--eeeeeecC--CCCce-EEEEECCC-CEEEEEeCCC-----eEEEEECCCC
Confidence 6777777753 579999998753 22211111 11111 22222244 5667777654 6888999876
No 135
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=83.37 E-value=44 Score=40.32 Aligned_cols=183 Identities=10% Similarity=0.029 Sum_probs=89.0
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
..+.+||..+++....-.. ....-.+++.. ++..++.|+. ...+.+||+.+. |........ ...
T Consensus 77 g~i~vw~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~------dg~i~vw~~~~~---~~~~~~~~~--~~~ 141 (814)
T 3mkq_A 77 FRIRVFNYNTGEKVVDFEA----HPDYIRSIAVHPTKPYVLSGSD------DLTVKLWNWENN---WALEQTFEG--HEH 141 (814)
T ss_dssp SEEEEEETTTCCEEEEEEC----CSSCEEEEEECSSSSEEEEEET------TSEEEEEEGGGT---SEEEEEEEC--CSS
T ss_pred CeEEEEECCCCcEEEEEec----CCCCEEEEEEeCCCCEEEEEcC------CCEEEEEECCCC---ceEEEEEcC--CCC
Confidence 3788999988776543221 11111122222 3445555653 246889998874 333321111 111
Q ss_pred cccEEEEEC-CcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEe--CCEEEEEeccCCCCC
Q 001895 229 YGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS--DGLLLLCGGRDASSV 305 (999)
Q Consensus 229 ~~h~~~v~~-~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~--~~~LyvfGG~~~~~~ 305 (999)
.-.+++... ++.+++.|+.++ .+..||+.+....+........ ......... ++.+++.|+.++
T Consensus 142 ~v~~~~~~p~~~~~l~~~~~dg-----~v~vwd~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~l~~~~~dg--- 208 (814)
T 3mkq_A 142 FVMCVAFNPKDPSTFASGCLDR-----TVKVWSLGQSTPNFTLTTGQER-----GVNYVDYYPLPDKPYMITASDDL--- 208 (814)
T ss_dssp CEEEEEEETTEEEEEEEEETTS-----EEEEEETTCSSCSEEEECCCTT-----CCCEEEECCSTTCCEEEEECTTS---
T ss_pred cEEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCcceeEEecCCCC-----CEEEEEEEECCCCCEEEEEeCCC---
Confidence 122333333 446788887765 6889998765334443322211 111222222 667777777543
Q ss_pred CcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEE
Q 001895 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (999)
Q Consensus 306 ~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~ 377 (999)
.+..++..+. .-..... + ....-.++++. ++.+++.|+.+ ..|.+||+.+.+-..
T Consensus 209 ---~i~~~d~~~~-~~~~~~~-~---~~~~v~~~~~~~~~~~l~~~~~d---------g~v~vwd~~~~~~~~ 264 (814)
T 3mkq_A 209 ---TIKIWDYQTK-SCVATLE-G---HMSNVSFAVFHPTLPIIISGSED---------GTLKIWNSSTYKVEK 264 (814)
T ss_dssp ---EEEEEETTTT-EEEEEEE-C---CSSCEEEEEECSSSSEEEEEETT---------SCEEEEETTTCSEEE
T ss_pred ---EEEEEECCCC-cEEEEEc-C---CCCCEEEEEEcCCCCEEEEEeCC---------CeEEEEECCCCcEEE
Confidence 2444444333 2111111 1 11111223333 45677777753 348889988765443
No 136
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=82.99 E-value=53 Score=39.45 Aligned_cols=200 Identities=11% Similarity=0.026 Sum_probs=100.1
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCC----------CCCcCcEEEEecCCCCCceEEE
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPA----------GLSAEDLHVLDLTQQRPRWHRV 218 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~----------~~~~~dv~vyD~~t~t~kW~~v 218 (999)
..++++|+.+++....... ... ..+.+.. +++.++++..... ......+|++++.+...+-..+
T Consensus 151 ~~i~v~d~~tg~~~~~~~~----~~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v 225 (710)
T 2xdw_A 151 VTIKFMKVDGAKELPDVLE----RVK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILC 225 (710)
T ss_dssp EEEEEEETTTTEEEEEEEE----EEC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEE
T ss_pred EEEEEEECCCCCCCccccc----Ccc-cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEE
Confidence 3799999999988765322 111 1223332 4444444332211 0223569999998753111222
Q ss_pred eecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCC------CCceEEEcccCCCCCCCccceEEEEEeCC
Q 001895 219 VVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA------KPYEWRKLEPEGEGPPPCMYATASARSDG 292 (999)
Q Consensus 219 ~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s------~~~~W~~v~~~~~~P~~r~~~~a~~~~~~ 292 (999)
. . ....+........-.+++.++++...+....+++|.+|+.+ ....|..+..... .........++
T Consensus 226 ~-~-~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~s~dg~ 298 (710)
T 2xdw_A 226 A-E-FPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFE-----GEYDYVTNEGT 298 (710)
T ss_dssp E-C-CTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS-----SCEEEEEEETT
T ss_pred e-c-cCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCC-----cEEEEEeccCC
Confidence 2 1 11122333333343333444444333322357899999975 3224666654322 11223334567
Q ss_pred EEEEEeccCCCCCCcccEEEEecCCCC--eEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEE
Q 001895 293 LLLLCGGRDASSVPLASAYGLAKHRDG--RWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLD 369 (999)
Q Consensus 293 ~LyvfGG~~~~~~~~~d~~~~~~~~~~--~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD 369 (999)
.||+.+..+. ....++.++..+.. .|+-..... ....-..+++. ++++++....++ ...|+++|
T Consensus 299 ~l~~~s~~~~---~~~~l~~~d~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~lv~~~~~~g-------~~~l~~~~ 365 (710)
T 2xdw_A 299 VFTFKTNRHS---PNYRLINIDFTDPEESKWKVLVPEH---EKDVLEWVACVRSNFLVLCYLHDV-------KNTLQLHD 365 (710)
T ss_dssp EEEEEECTTC---TTCEEEEEETTSCCGGGCEEEECCC---SSCEEEEEEEETTTEEEEEEEETT-------EEEEEEEE
T ss_pred EEEEEECCCC---CCCEEEEEeCCCCCcccceeccCCC---CCCeEEEEEEEcCCEEEEEEEECC-------EEEEEEEE
Confidence 7888765432 23457777665432 354333221 11223345555 678887765433 34599999
Q ss_pred CCCCe
Q 001895 370 TAAGV 374 (999)
Q Consensus 370 ~~t~~ 374 (999)
+.+++
T Consensus 366 ~~~g~ 370 (710)
T 2xdw_A 366 LATGA 370 (710)
T ss_dssp TTTCC
T ss_pred CCCCC
Confidence 86654
No 137
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=82.74 E-value=38 Score=38.80 Aligned_cols=48 Identities=8% Similarity=-0.101 Sum_probs=31.5
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCC
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQ 210 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t 210 (999)
..|.||..+++...-.-.+ .| . --+|....+++|+|-| +..|+||..+
T Consensus 168 ~yw~yd~~~~~~~~~~w~g-i~--~-iDAA~~~~g~~YfFkG--------~~y~rfd~~~ 215 (460)
T 1qhu_A 168 RKWFWDLTTGTKKERSWPA-VG--N-CTSALRWLGRYYCFQG--------NQFLRFNPVS 215 (460)
T ss_dssp EEEEEETTTTEEEEECCTT-SC--C-CSEEEEETTEEEEEET--------TEEEEECTTT
T ss_pred cEEEEecccceeecccCCC-CC--c-cchheeeCCceEEEEC--------CEEEEEcCcc
Confidence 6799999887665432222 22 2 3455555789999988 4678888754
No 138
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=82.65 E-value=15 Score=39.91 Aligned_cols=207 Identities=13% Similarity=0.012 Sum_probs=92.5
Q ss_pred ccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCE-EEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCC
Q 001895 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTM-VVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (999)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~-iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P 225 (999)
....++.+|+.+.+...+... .....+....- ++. |++... .........+|++|+.+. ++..+.. ..+
T Consensus 166 ~~~~l~~~d~~~g~~~~~~~~----~~~~~~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~~--~~~~l~~--~~~ 236 (396)
T 3c5m_A 166 PTCRLIKVDIETGELEVIHQD----TAWLGHPIYRPFDDSTVGFCHE-GPHDLVDARMWLVNEDGS--NVRKIKE--HAE 236 (396)
T ss_dssp CCEEEEEEETTTCCEEEEEEE----SSCEEEEEEETTEEEEEEEEEC-SCSSSCSCCCEEEETTSC--CCEESSC--CCT
T ss_pred CcceEEEEECCCCcEEeeccC----CcccccceECCCCCCEEEEEec-CCCCCCCceEEEEECCCC--ceeEeec--cCC
Confidence 445899999999888777532 11222222222 233 444432 222222357999998764 3555531 001
Q ss_pred CCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEe-CCEEEEEeccCCC-
Q 001895 226 GPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS-DGLLLLCGGRDAS- 303 (999)
Q Consensus 226 ~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~-~~~LyvfGG~~~~- 303 (999)
...-...+.-.++..+++...........++++|+.+. +...+..... . . ..... +++++++++.+..
T Consensus 237 -~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g--~~~~l~~~~~-----~-~-~~~s~~dg~~l~~~~~~~p~ 306 (396)
T 3c5m_A 237 -GESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETL--ENEEVMVMPP-----C-S-HLMSNFDGSLMVGDGCDAPV 306 (396)
T ss_dssp -TEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTC--CEEEEEECCS-----E-E-EEEECSSSSEEEEEECCC--
T ss_pred -CccccceEECCCCCEEEEEecCCCCccceEEEEECCCC--CeEEeeeCCC-----C-C-CCccCCCCceEEEecCCcce
Confidence 11111222332333333333322222244999999887 6655543221 1 1 33344 6777776553210
Q ss_pred ---------CCCcccEEEEecCCCCeEEEEECCCCCC------CCcceeEEEE-ECCEEEEEcCcCCCCCCcccCCeEEE
Q 001895 304 ---------SVPLASAYGLAKHRDGRWEWAIAPGVSP------SPRYQHAAVF-VNARLHVSGGALGGGRMVEDSSSVAV 367 (999)
Q Consensus 304 ---------~~~~~d~~~~~~~~~~~W~w~~~~g~~P------~~R~~hsav~-~~~~L~V~GG~~~~~~~~~~~~~v~v 367 (999)
......++.++.... ............ ........++ -+++.+++..... + ...+|.
T Consensus 307 ~~~~~~~~~~~~~~~i~~~d~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~-~-----~~~l~~ 379 (396)
T 3c5m_A 307 DVADADSYNIENDPFLYVLNTKAK-SAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFE-G-----VPAIYI 379 (396)
T ss_dssp --------CCCCCCEEEEEETTTT-BCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTT-S-----SCEEEE
T ss_pred eeccccccccCCCCcEEEEecccC-ceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCC-C-----CceEEE
Confidence 012345677765433 222222111100 0000111122 2444333433221 1 346999
Q ss_pred EECCCCeEEEccc
Q 001895 368 LDTAAGVWCDTKS 380 (999)
Q Consensus 368 yD~~t~~W~~v~~ 380 (999)
+|+.+..++.+..
T Consensus 380 ~~~~~~~~~~~~~ 392 (396)
T 3c5m_A 380 ADVPESYKHLEHH 392 (396)
T ss_dssp EECCTTCC-----
T ss_pred EEEcccccccccc
Confidence 9999988776543
No 139
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=82.48 E-value=20 Score=38.67 Aligned_cols=162 Identities=12% Similarity=0.097 Sum_probs=78.5
Q ss_pred CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCC
Q 001895 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (999)
Q Consensus 184 g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s 263 (999)
++.+++.||.+ ..+.+||+.+. +|........ .....-.+++...++.+++.|+.++ .+..||+.+
T Consensus 27 ~g~~las~~~D------~~i~iw~~~~~--~~~~~~~~~~-~h~~~v~~~~~sp~g~~l~s~s~D~-----~v~iw~~~~ 92 (345)
T 3fm0_A 27 AGTLLASCGGD------RRIRIWGTEGD--SWICKSVLSE-GHQRTVRKVAWSPCGNYLASASFDA-----TTCIWKKNQ 92 (345)
T ss_dssp TSSCEEEEETT------SCEEEEEEETT--EEEEEEEECS-SCSSCEEEEEECTTSSEEEEEETTS-----CEEEEEECC
T ss_pred CCCEEEEEcCC------CeEEEEEcCCC--cceeeeeecc-ccCCcEEEEEECCCCCEEEEEECCC-----cEEEEEccC
Confidence 34666677642 46888888775 3543321100 0111112233333446777888776 456677766
Q ss_pred CCceEEEcccCCCCCCCccceEEE-EEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE
Q 001895 264 KPYEWRKLEPEGEGPPPCMYATAS-ARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV 342 (999)
Q Consensus 264 ~~~~W~~v~~~~~~P~~r~~~~a~-~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~ 342 (999)
. .+..+...... ...-.++ ...++.+++.|+.++. ..+|.+ .....+........ ....-.++++.
T Consensus 93 ~--~~~~~~~~~~h---~~~v~~v~~sp~~~~l~s~s~D~~----v~iwd~--~~~~~~~~~~~~~~--h~~~v~~~~~~ 159 (345)
T 3fm0_A 93 D--DFECVTTLEGH---ENEVKSVAWAPSGNLLATCSRDKS----VWVWEV--DEEDEYECVSVLNS--HTQDVKHVVWH 159 (345)
T ss_dssp C---EEEEEEECCC---SSCEEEEEECTTSSEEEEEETTSC----EEEEEE--CTTSCEEEEEEECC--CCSCEEEEEEC
T ss_pred C--CeEEEEEccCC---CCCceEEEEeCCCCEEEEEECCCe----EEEEEC--CCCCCeEEEEEecC--cCCCeEEEEEC
Confidence 6 45433222110 1112222 2346778888886643 223333 22222222211110 11111223332
Q ss_pred -CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccC
Q 001895 343 -NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (999)
Q Consensus 343 -~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~ 381 (999)
++.+++.|+.++ .|.+||..+..|..+..+
T Consensus 160 p~~~~l~s~s~d~---------~i~~w~~~~~~~~~~~~~ 190 (345)
T 3fm0_A 160 PSQELLASASYDD---------TVKLYREEEDDWVCCATL 190 (345)
T ss_dssp SSSSCEEEEETTS---------CEEEEEEETTEEEEEEEE
T ss_pred CCCCEEEEEeCCC---------cEEEEEecCCCEEEEEEe
Confidence 566777777533 478899989888765544
No 140
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=82.23 E-value=57 Score=39.78 Aligned_cols=189 Identities=6% Similarity=0.013 Sum_probs=96.8
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecC---CCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG---PGP 225 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g---~~P 225 (999)
.-+++||+.+++++.+...........-.+.+.. ++.|++... +.+++||..+. +|+...... .++
T Consensus 427 ~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~--------~Gl~~~~~~~~--~~~~~~~~~~~~~~~ 496 (795)
T 4a2l_A 427 GGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL--------SALVRFNPEQR--SFTTIEKEKDGTPVV 496 (795)
T ss_dssp TEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES--------SCEEEEETTTT--EEEECCBCTTCCBCC
T ss_pred CceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec--------CceeEEeCCCC--eEEEccccccccccC
Confidence 5789999999988887542110001111222222 346666432 35899998875 577664220 111
Q ss_pred CCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCC-CCccceEEEEE-eCCEEEEEeccCCC
Q 001895 226 GPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGP-PPCMYATASAR-SDGLLLLCGGRDAS 303 (999)
Q Consensus 226 ~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P-~~r~~~~a~~~-~~~~LyvfGG~~~~ 303 (999)
... -.+++...++.||+... . -+++||+.+. ++ ......... .+.....+... .++.||+...
T Consensus 497 ~~~-i~~i~~d~~g~lWigt~-~------Gl~~~~~~~~--~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~---- 561 (795)
T 4a2l_A 497 SKQ-ITTLFRDSHKRLWIGGE-E------GLSVFKQEGL--DI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR---- 561 (795)
T ss_dssp CCC-EEEEEECTTCCEEEEES-S------CEEEEEEETT--EE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES----
T ss_pred Cce-EEEEEECCCCCEEEEeC-C------ceEEEeCCCC--eE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC----
Confidence 111 12233334446777543 2 4899999888 77 433210101 11112222222 3578887532
Q ss_pred CCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEccc
Q 001895 304 SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKS 380 (999)
Q Consensus 304 ~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~ 380 (999)
..++.|+..+. ++.......-.|... -.+++.- ++.||+.+. +.+.+||+++.++.....
T Consensus 562 ----~Gl~~~d~~~~-~~~~~~~~~gl~~~~-i~~i~~d~~g~lWi~t~-----------~Gl~~~~~~~~~~~~~~~ 622 (795)
T 4a2l_A 562 ----EGFYCFNEKDK-QIKRYNTTNGLPNNV-VYGILEDSFGRLWLSTN-----------RGISCFNPETEKFRNFTE 622 (795)
T ss_dssp ----SCEEEEETTTT-EEEEECGGGTCSCSC-EEEEEECTTSCEEEEET-----------TEEEEEETTTTEEEEECG
T ss_pred ----CCceeECCCCC-cEEEeCCCCCCchhh-eEEEEECCCCCEEEEcC-----------CceEEEcCCCCcEEEcCC
Confidence 13667776554 444332221122222 2233332 467887652 348899999999887654
No 141
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=81.84 E-value=51 Score=34.54 Aligned_cols=193 Identities=9% Similarity=-0.016 Sum_probs=87.3
Q ss_pred CeEEEEEC-CCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEE--EeecCCCCC
Q 001895 150 ADVHCYDV-LTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHR--VVVQGPGPG 226 (999)
Q Consensus 150 ~dv~~yD~-~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~--v~~~g~~P~ 226 (999)
..+.+||+ .+.....+... +....-.+++...+.+++.|+.+ ..+.+||+.+....-.. .........
T Consensus 79 g~i~~wd~~~~~~~~~~~~~---~~~~~v~~l~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 149 (342)
T 1yfq_A 79 GEILKVDLIGSPSFQALTNN---EANLGICRICKYGDDKLIAASWD------GLIEVIDPRNYGDGVIAVKNLNSNNTKV 149 (342)
T ss_dssp SCEEEECSSSSSSEEECBSC---CCCSCEEEEEEETTTEEEEEETT------SEEEEECHHHHTTBCEEEEESCSSSSSS
T ss_pred CeEEEEEeccCCceEecccc---CCCCceEEEEeCCCCEEEEEcCC------CeEEEEcccccccccccccCCeeeEEee
Confidence 37888999 88877665431 01111122222224455555532 56888887651000000 000011222
Q ss_pred CCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCC-CCceEEEcccCCCCCCCccceEEEEE-e-CCEEEEEeccCCC
Q 001895 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA-KPYEWRKLEPEGEGPPPCMYATASAR-S-DGLLLLCGGRDAS 303 (999)
Q Consensus 227 ~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s-~~~~W~~v~~~~~~P~~r~~~~a~~~-~-~~~LyvfGG~~~~ 303 (999)
...-.+++...+ . ++.|+.++ .+..||+.+ ............. ..-.++.. . ++.+++.|+.++.
T Consensus 150 ~~~v~~~~~~~~-~-l~~~~~d~-----~i~i~d~~~~~~~~~~~~~~~~~-----~~i~~i~~~~~~~~~l~~~~~dg~ 217 (342)
T 1yfq_A 150 KNKIFTMDTNSS-R-LIVGMNNS-----QVQWFRLPLCEDDNGTIEESGLK-----YQIRDVALLPKEQEGYACSSIDGR 217 (342)
T ss_dssp CCCEEEEEECSS-E-EEEEESTT-----EEEEEESSCCTTCCCEEEECSCS-----SCEEEEEECSGGGCEEEEEETTSE
T ss_pred CCceEEEEecCC-c-EEEEeCCC-----eEEEEECCccccccceeeecCCC-----CceeEEEECCCCCCEEEEEecCCc
Confidence 222233434444 4 55665554 688999977 3212222211111 11223333 3 5677777776432
Q ss_pred CCCcccEEEEecC-----CCCeEEEEECCCCCC---CCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCe
Q 001895 304 SVPLASAYGLAKH-----RDGRWEWAIAPGVSP---SPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (999)
Q Consensus 304 ~~~~~d~~~~~~~-----~~~~W~w~~~~g~~P---~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~ 374 (999)
..+|.++.. ......+........ ....-.++++. ++++++.|+.+ ..|.+||+.+.+
T Consensus 218 ----i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---------g~i~vwd~~~~~ 284 (342)
T 1yfq_A 218 ----VAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSD---------GIISCWNLQTRK 284 (342)
T ss_dssp ----EEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETT---------SCEEEEETTTTE
T ss_pred ----EEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCC---------ceEEEEcCccHh
Confidence 334445443 121222222111000 00012233333 56777777753 348899999886
Q ss_pred EE
Q 001895 375 WC 376 (999)
Q Consensus 375 W~ 376 (999)
-.
T Consensus 285 ~~ 286 (342)
T 1yfq_A 285 KI 286 (342)
T ss_dssp EE
T ss_pred Hh
Confidence 54
No 142
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=81.15 E-value=38 Score=40.57 Aligned_cols=110 Identities=7% Similarity=-0.015 Sum_probs=50.5
Q ss_pred eEEEEECCC-CCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCC
Q 001895 255 DVWALDTAA-KPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSP 333 (999)
Q Consensus 255 dv~~yDl~s-~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~ 333 (999)
.++.+|+.+ . +-..+.... ........... .+++.++++..+... ....++.++..+. ............--
T Consensus 264 ~l~~~d~~~~~--~~~~~~~~~--~~~~~~~~~~~-pDg~~l~~~~~~~~~-~~~~i~~~d~~~g-~~~~~~~~~~~~~~ 336 (741)
T 2ecf_A 264 KLGVISPAEQA--QTQWIDLGK--EQDIYLARVNW-RDPQHLSFQRQSRDQ-KKLDLVEVTLASN-QQRVLAHETSPTWV 336 (741)
T ss_dssp EEEEECSSTTC--CCEEECCCS--CSSEEEEEEEE-EETTEEEEEEEETTS-SEEEEEEEETTTC-CEEEEEEEECSSCC
T ss_pred EEEEEECCCCC--ceEEecCCC--CcceEEEEEEe-CCCCEEEEEEecccC-CeEEEEEEECCCC-ceEEEEEcCCCCcC
Confidence 789999987 7 333332210 01112223334 566555554432221 3456777766543 33222111000000
Q ss_pred cceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcc
Q 001895 334 RYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTK 379 (999)
Q Consensus 334 R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~ 379 (999)
......++. ++++++.++.++ ...||.+|+... +..+.
T Consensus 337 ~~~~~~~~spdg~~~~~~~~~g-------~~~l~~~~~~~~-~~~l~ 375 (741)
T 2ecf_A 337 PLHNSLRFLDDGSILWSSERTG-------FQHLYRIDSKGK-AAALT 375 (741)
T ss_dssp CCCSCCEECTTSCEEEEECTTS-------SCEEEEECSSSC-EEESC
T ss_pred CcCCceEECCCCeEEEEecCCC-------ccEEEEEcCCCC-eeeee
Confidence 000122222 567666665432 356999997766 55554
No 143
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=81.09 E-value=8.3 Score=42.18 Aligned_cols=151 Identities=15% Similarity=0.097 Sum_probs=70.4
Q ss_pred CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcc-cEEEEE-CCcEEEEEccCCCCCCCCeEEEEEC
Q 001895 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYG-HVMALV-GQRYLMAIGGNDGKRPLADVWALDT 261 (999)
Q Consensus 184 g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~-h~~~v~-~~~~Lyv~GG~~g~~~~ndv~~yDl 261 (999)
++..++.|+.. ..+.+||+.+.. -...- ...... .+++.. .+..+++.||.++ .+..||+
T Consensus 150 dg~~l~sgs~d------g~v~iwd~~~~~--~~~~~-----~~h~~~v~~v~~s~~~~~~~~s~~~dg-----~v~~wd~ 211 (357)
T 4g56_B 150 DGTQAVSGGKD------FSVKVWDLSQKA--VLKSY-----NAHSSEVNCVAACPGKDTIFLSCGEDG-----RILLWDT 211 (357)
T ss_dssp SSSEEEEEETT------SCEEEEETTTTE--EEEEE-----CCCSSCEEEEEECTTCSSCEEEEETTS-----CEEECCT
T ss_pred CCCEEEEEeCC------CeEEEEECCCCc--EEEEE-----cCCCCCEEEEEEccCCCceeeeeccCC-----ceEEEEC
Confidence 44666667642 468999998752 22111 111111 122222 2324777777765 4777888
Q ss_pred CCCCceEEEcccCCCCCCCccceEEEEEe--CCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEE
Q 001895 262 AAKPYEWRKLEPEGEGPPPCMYATASARS--DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAA 339 (999)
Q Consensus 262 ~s~~~~W~~v~~~~~~P~~r~~~~a~~~~--~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsa 339 (999)
.+. +-........ ......++... ++.+++.|+.++. +..++..+. +-.... .+ ....-.++
T Consensus 212 ~~~--~~~~~~~~~~---~~~~v~~v~~sp~~~~~la~g~~d~~------i~~wd~~~~-~~~~~~-~~---~~~~v~~l 275 (357)
T 4g56_B 212 RKP--KPATRIDFCA---SDTIPTSVTWHPEKDDTFACGDETGN------VSLVNIKNP-DSAQTS-AV---HSQNITGL 275 (357)
T ss_dssp TSS--SCBCBCCCTT---CCSCEEEEEECTTSTTEEEEEESSSC------EEEEESSCG-GGCEEE-CC---CSSCEEEE
T ss_pred CCC--ceeeeeeecc---ccccccchhhhhcccceEEEeecccc------eeEEECCCC-cEeEEE-ec---cceeEEEE
Confidence 765 2111111111 01122233332 4667777776542 333333322 101111 11 11112233
Q ss_pred EEE-C-CEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEE
Q 001895 340 VFV-N-ARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (999)
Q Consensus 340 v~~-~-~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~ 377 (999)
++. + .++++.|+.+ ..|.+||..+.+-..
T Consensus 276 ~~sp~~~~~lasgs~D---------~~i~iwd~~~~~~~~ 306 (357)
T 4g56_B 276 AYSYHSSPFLASISED---------CTVAVLDADFSEVFR 306 (357)
T ss_dssp EECSSSSCCEEEEETT---------SCEEEECTTSCEEEE
T ss_pred EEcCCCCCEEEEEeCC---------CEEEEEECCCCcEeE
Confidence 332 3 4677777653 248889999887554
No 144
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=80.58 E-value=1e+02 Score=36.59 Aligned_cols=83 Identities=8% Similarity=-0.003 Sum_probs=46.5
Q ss_pred CCEEEEEcccC---------CCCCCcCcEEEEecCCCCCceEEEeecCCCCC--CCcccEEEEE---CCc--EEEEEccC
Q 001895 184 GTMVVIQGGIG---------PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG--PRYGHVMALV---GQR--YLMAIGGN 247 (999)
Q Consensus 184 g~~iyv~GG~~---------~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~--~R~~h~~~v~---~~~--~Lyv~GG~ 247 (999)
.+.||+--|.. .+..+...++.+|..+...+|+.-....+.-- .-....++-. ++. .+++.+..
T Consensus 252 ~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~ 331 (599)
T 1w6s_A 252 TNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDR 331 (599)
T ss_dssp TTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECT
T ss_pred CCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECC
Confidence 45777765532 12234568999999998778987542211100 0011122221 221 45665655
Q ss_pred CCCCCCCeEEEEECCCCCceEEEc
Q 001895 248 DGKRPLADVWALDTAAKPYEWRKL 271 (999)
Q Consensus 248 ~g~~~~ndv~~yDl~s~~~~W~~v 271 (999)
++ .++++|..+....|..-
T Consensus 332 ~G-----~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 332 NG-----IVYTLDRTDGALVSANK 350 (599)
T ss_dssp TS-----EEEEEETTTCCEEEEEE
T ss_pred Cc-----EEEEEECCCCCEeeccc
Confidence 44 68999998887788753
No 145
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=80.28 E-value=60 Score=33.96 Aligned_cols=93 Identities=13% Similarity=0.095 Sum_probs=47.7
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCc
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~ 229 (999)
.+..+|+.+..-...-... ... -.++... ++.+++.|+. ...+.+||+.+.. .-..+. + ....
T Consensus 36 ~v~lWd~~~~~~~~~~~~~---~~~-v~~~~~~~~~~~l~s~s~------d~~i~vwd~~~~~-~~~~~~--~---h~~~ 99 (304)
T 2ynn_A 36 RVELWNYETQVEVRSIQVT---ETP-VRAGKFIARKNWIIVGSD------DFRIRVFNYNTGE-KVVDFE--A---HPDY 99 (304)
T ss_dssp EEEEEETTTTEEEEEEECC---SSC-EEEEEEEGGGTEEEEEET------TSEEEEEETTTCC-EEEEEE--C---CSSC
T ss_pred cEEEEECCCCceeEEeecc---CCc-EEEEEEeCCCCEEEEECC------CCEEEEEECCCCc-EEEEEe--C---CCCc
Confidence 6788898877543321110 101 1122222 3455666664 2578999998753 122222 1 1111
Q ss_pred ccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCC
Q 001895 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 230 ~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
-.+++...++.+++.|+.++ .+..||+.+.
T Consensus 100 v~~~~~~~~~~~l~sgs~D~-----~v~lWd~~~~ 129 (304)
T 2ynn_A 100 IRSIAVHPTKPYVLSGSDDL-----TVKLWNWENN 129 (304)
T ss_dssp EEEEEECSSSSEEEEEETTS-----CEEEEEGGGT
T ss_pred EEEEEEcCCCCEEEEECCCC-----eEEEEECCCC
Confidence 22333444445777787775 5777887654
No 146
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=80.17 E-value=1.1 Score=53.16 Aligned_cols=68 Identities=21% Similarity=0.213 Sum_probs=43.1
Q ss_pred cCCeEEEecCCCCH--------------------HHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCCh-----HHHH
Q 001895 697 KAPIKIFGDLHGQF--------------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS-----LETI 751 (999)
Q Consensus 697 ~~~i~vvGDiHG~~--------------------~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s-----~evl 751 (999)
+-.|+.+.|+||++ ..|..+++.+.-.... .-+|+.||+++..+.+ ..++
T Consensus 25 ~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~-----~l~l~~GD~~~g~~~~~~~~g~~~~ 99 (546)
T 4h2g_A 25 ELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPN-----VLLLDAGDQYQGTIWFTVYKGAEVA 99 (546)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSS-----EEEEECSCCSSSSHHHHHHTTHHHH
T ss_pred EEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCC-----EEEEECCccCCCchhhhhhCChHHH
Confidence 34589999999874 4455566554321111 1467799999987543 4456
Q ss_pred HHHHHhhhcCCCCEEEecCCccc
Q 001895 752 TLLLALKVEYPNNVHLIRGNHEA 774 (999)
Q Consensus 752 ~ll~~lk~~~P~~v~llrGNHE~ 774 (999)
.+|-++.. -++..||||.
T Consensus 100 ~~ln~lg~-----d~~~~GNHEf 117 (546)
T 4h2g_A 100 HFMNALRY-----DAMALGNHEF 117 (546)
T ss_dssp HHHHHHTC-----SEEECCGGGG
T ss_pred HHHHhcCC-----cEEeccCccc
Confidence 66655532 2567899996
No 147
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=79.87 E-value=73 Score=34.59 Aligned_cols=96 Identities=10% Similarity=-0.003 Sum_probs=49.0
Q ss_pred CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCC
Q 001895 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (999)
Q Consensus 184 g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s 263 (999)
++.+++.|+.+ ..+.+||+.+.. ..... ......-.+++...++.+++.|+.++ .+..||+.+
T Consensus 108 ~~~~l~~~~~d------g~i~iwd~~~~~----~~~~~--~~h~~~v~~~~~~~~~~~l~s~s~d~-----~i~iwd~~~ 170 (420)
T 3vl1_A 108 QMRRFILGTTE------GDIKVLDSNFNL----QREID--QAHVSEITKLKFFPSGEALISSSQDM-----QLKIWSVKD 170 (420)
T ss_dssp SSCEEEEEETT------SCEEEECTTSCE----EEEET--TSSSSCEEEEEECTTSSEEEEEETTS-----EEEEEETTT
T ss_pred CCCEEEEEECC------CCEEEEeCCCcc----eeeec--ccccCccEEEEECCCCCEEEEEeCCC-----eEEEEeCCC
Confidence 45667777642 578999988642 22211 01112223333444445777777665 688899876
Q ss_pred CCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCC
Q 001895 264 KPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (999)
Q Consensus 264 ~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~ 302 (999)
....... .... ..........++.+++.|+.++
T Consensus 171 ~~~~~~~-~~h~-----~~v~~~~~~~~~~~l~s~~~d~ 203 (420)
T 3vl1_A 171 GSNPRTL-IGHR-----ATVTDIAIIDRGRNVLSASLDG 203 (420)
T ss_dssp CCCCEEE-ECCS-----SCEEEEEEETTTTEEEEEETTS
T ss_pred CcCceEE-cCCC-----CcEEEEEEcCCCCEEEEEcCCC
Confidence 5222221 1110 1112222333666777777654
No 148
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=79.16 E-value=18 Score=44.12 Aligned_cols=197 Identities=10% Similarity=0.117 Sum_probs=93.6
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--C--CEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--G--TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g--~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P 225 (999)
..+.+||+.++.|..+.... .....-..+.+ + +.+++.|+.+ ..+.+||+.+... .......+ .+
T Consensus 77 g~I~vwd~~~~~~~~~~~~~---~h~~~V~~v~~sp~~~~~~l~sgs~d------g~I~vwdl~~~~~-~~~~~~~~-~~ 145 (753)
T 3jro_A 77 GKVLIWKEENGRWSQIAVHA---VHSASVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKENGT-TSPIIIDA-HA 145 (753)
T ss_dssp SCEEEEEEETTEEEEEEEEC---CCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEECCSSSC-CCCEEEEC-CS
T ss_pred CeEEEEECCCCccccccccc---CCCCCeEEEEECCCCCCCEEEEEeCC------CcEEEEEeecCCC-cceeEeec-CC
Confidence 36888999998887665442 11112222222 2 5567777642 4788999876521 11111111 11
Q ss_pred CCCcccEEEEEC-------------CcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeC-
Q 001895 226 GPRYGHVMALVG-------------QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSD- 291 (999)
Q Consensus 226 ~~R~~h~~~v~~-------------~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~- 291 (999)
..-.+++... ++.+++.|+.++ .+..||+.+....|..+....... ..........+
T Consensus 146 --~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg-----~I~iwd~~~~~~~~~~~~~~~~h~--~~V~~l~~sp~~ 216 (753)
T 3jro_A 146 --IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGHS--DWVRDVAWSPTV 216 (753)
T ss_dssp --SCEEEEEECCCC---------CGGGCCEEEEETTS-----CEEEEEEETTTTEEEEEEEECCCS--SCEEEEEECCCC
T ss_pred --CceEEEEecCcccccccccccCCCCCEEEEEECCC-----eEEEEeccCCcccceeeeeecCCC--CcEEEEEeccCC
Confidence 1111222222 235777787765 477777765533565543322110 11122222334
Q ss_pred --CEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEE
Q 001895 292 --GLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVL 368 (999)
Q Consensus 292 --~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vy 368 (999)
+.+++.||.++. ..+|.+..... .+...... .......-.++++. ++.+++.||.++ .|.+|
T Consensus 217 ~~~~~l~s~s~Dg~----I~iwd~~~~~~-~~~~~~~~-~~~~~~~v~~l~~spdg~~l~s~s~Dg---------~I~vw 281 (753)
T 3jro_A 217 LLRSYLASVSQDRT----CIIWTQDNEQG-PWKKTLLK-EEKFPDVLWRASWSLSGNVLALSGGDN---------KVTLW 281 (753)
T ss_dssp SSSEEEEEEESSSC----EEEEEESSSSS-CCBCCBSS-SSCCSSCCCCEEECTTTCCEEEECSSS---------CEECC
T ss_pred CCCCEEEEEecCCE----EEEecCCCCCC-cceeEEec-cCCCCCceEEEEEcCCCCEEEEEcCCC---------EEEEE
Confidence 788888887653 23443333211 11101111 00111112233333 577788887533 37788
Q ss_pred ECCC-CeEEEcccC
Q 001895 369 DTAA-GVWCDTKSV 381 (999)
Q Consensus 369 D~~t-~~W~~v~~~ 381 (999)
|..+ ..|......
T Consensus 282 d~~~~~~~~~~~~~ 295 (753)
T 3jro_A 282 KENLEGKWEPAGEV 295 (753)
T ss_dssp BCCSSSCCBCCCCB
T ss_pred ecCCCCCccccccc
Confidence 8774 456554443
No 149
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=79.12 E-value=19 Score=38.93 Aligned_cols=133 Identities=13% Similarity=0.161 Sum_probs=58.4
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
.+.+||+.+..|..+.... .....-..+.+ ++.+++.|+.+ ..+.+||+.+.. .|....... ....
T Consensus 34 ~i~iw~~~~~~~~~~~~~~---~h~~~v~~~~~s~~~~~l~s~s~d------~~v~vwd~~~~~-~~~~~~~~~--~~~~ 101 (377)
T 3dwl_C 34 QVELYEQDGNGWKHARTFS---DHDKIVTCVDWAPKSNRIVTCSQD------RNAYVYEKRPDG-TWKQTLVLL--RLNR 101 (377)
T ss_dssp CBCEEEEETTEEEECCCBC---CCSSCEEEEEECTTTCCEEEEETT------SSEEEC-------CCCCEEECC--CCSS
T ss_pred EEEEEEccCCceEEEEEEe---cCCceEEEEEEeCCCCEEEEEeCC------CeEEEEEcCCCC-ceeeeeEec--ccCC
Confidence 5667888888887776542 11111222222 34666666642 468999988742 233332110 1111
Q ss_pred cccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCC
Q 001895 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (999)
Q Consensus 229 ~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~ 302 (999)
.-.+++...++.+++.|+.++ .+..||+.+.. .|..+..... +............++.+++.|+.++
T Consensus 102 ~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~-~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~~~~~d~ 168 (377)
T 3dwl_C 102 AATFVRWSPNEDKFAVGSGAR-----VISVCYFEQEN-DWWVSKHLKR-PLRSTILSLDWHPNNVLLAAGCADR 168 (377)
T ss_dssp CEEEEECCTTSSCCEEEESSS-----CEEECCC------CCCCEEECS-SCCSCEEEEEECTTSSEEEEEESSS
T ss_pred ceEEEEECCCCCEEEEEecCC-----eEEEEEECCcc-cceeeeEeec-ccCCCeEEEEEcCCCCEEEEEeCCC
Confidence 122233333345677777665 46777776652 1322221111 0011112222333667778887654
No 150
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=79.04 E-value=70 Score=33.87 Aligned_cols=97 Identities=12% Similarity=0.086 Sum_probs=50.6
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCc
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~ 229 (999)
.+.+||+.+.++....... .....-.+++.. ++..++.|+.+ ..+.+||+.+.. .|...... ..+....
T Consensus 75 ~i~vwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d------~~v~i~d~~~~~-~~~~~~~~-~~~~~~~ 144 (372)
T 1k8k_C 75 NAYVWTLKGRTWKPTLVIL--RINRAARCVRWAPNEKKFAVGSGS------RVISICYFEQEN-DWWVCKHI-KKPIRST 144 (372)
T ss_dssp CEEEEEEETTEEEEEEECC--CCSSCEEEEEECTTSSEEEEEETT------SSEEEEEEETTT-TEEEEEEE-CTTCCSC
T ss_pred eEEEEECCCCeeeeeEEee--cCCCceeEEEECCCCCEEEEEeCC------CEEEEEEecCCC-cceeeeee-ecccCCC
Confidence 6888898888876554321 111111222222 34566666532 468888888754 34433321 1111222
Q ss_pred ccEEEEECCcEEEEEccCCCCCCCCeEEEEECC
Q 001895 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTA 262 (999)
Q Consensus 230 ~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~ 262 (999)
-.+++...++.+++.|+.++ .+..||+.
T Consensus 145 i~~~~~~~~~~~l~~~~~dg-----~i~~~d~~ 172 (372)
T 1k8k_C 145 VLSLDWHPNSVLLAAGSCDF-----KCRIFSAY 172 (372)
T ss_dssp EEEEEECTTSSEEEEEETTS-----CEEEEECC
T ss_pred eeEEEEcCCCCEEEEEcCCC-----CEEEEEcc
Confidence 23333444446777787665 57778853
No 151
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=78.91 E-value=55 Score=39.29 Aligned_cols=200 Identities=12% Similarity=0.045 Sum_probs=102.0
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCC-EEEEEcccCCC------CCCcCcEEEEecCCCCCceEEEeecC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGT-MVVIQGGIGPA------GLSAEDLHVLDLTQQRPRWHRVVVQG 222 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~-~iyv~GG~~~~------~~~~~dv~vyD~~t~t~kW~~v~~~g 222 (999)
.+++++|+.+++....... ..+....+-. ++ .||+.--.... ......+|++++.+...+=..+.
T Consensus 155 ~~i~v~dl~tg~~~~~~~~----~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~--- 226 (693)
T 3iuj_A 155 REIHLMDVESKQPLETPLK----DVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVF--- 226 (693)
T ss_dssp EEEEEEETTTCSEEEEEEE----EEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEE---
T ss_pred EEEEEEECCCCCCCccccC----CceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEE---
Confidence 4899999999987665321 1122233334 54 45444322110 12345799998876421112232
Q ss_pred CCCC--CCcccEEEEE-CCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEec
Q 001895 223 PGPG--PRYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGG 299 (999)
Q Consensus 223 ~~P~--~R~~h~~~v~-~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG 299 (999)
..+. +.....+..- ++.+|++....... .+++|.+|+.+..-.|..+..... .........++.||+...
T Consensus 227 ~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~--~~~i~~~d~~~~~~~~~~l~~~~~-----~~~~~~~~~g~~l~~~t~ 299 (693)
T 3iuj_A 227 GAIPAQHHRYVGATVTEDDRFLLISAANSTS--GNRLYVKDLSQENAPLLTVQGDLD-----ADVSLVDNKGSTLYLLTN 299 (693)
T ss_dssp SCSGGGCCSEEEEEECTTSCEEEEEEESSSS--CCEEEEEETTSTTCCCEEEECSSS-----SCEEEEEEETTEEEEEEC
T ss_pred ecCCCCCeEEEEEEEcCCCCEEEEEEccCCC--CcEEEEEECCCCCCceEEEeCCCC-----ceEEEEeccCCEEEEEEC
Confidence 1222 2222223333 33344444332222 369999998765335777654322 112224455789998876
Q ss_pred cCCCCCCcccEEEEecCCCC--eEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEE
Q 001895 300 RDASSVPLASAYGLAKHRDG--RWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (999)
Q Consensus 300 ~~~~~~~~~d~~~~~~~~~~--~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~ 377 (999)
.+. ....++.++..... .|+-..... .. .. +....+++|++..-.++ ...|+++|+.......
T Consensus 300 ~~~---~~~~l~~~d~~~~~~~~~~~l~~~~--~~--~~-~~s~~g~~lv~~~~~~g-------~~~l~~~d~~g~~~~~ 364 (693)
T 3iuj_A 300 RDA---PNRRLVTVDAANPGPAHWRDLIPER--QQ--VL-TVHSGSGYLFAEYMVDA-------TARVEQFDYEGKRVRE 364 (693)
T ss_dssp TTC---TTCEEEEEETTSCCGGGCEEEECCC--SS--CE-EEEEETTEEEEEEEETT-------EEEEEEECTTSCEEEE
T ss_pred CCC---CCCEEEEEeCCCCCccccEEEecCC--CC--EE-EEEEECCEEEEEEEECC-------eeEEEEEECCCCeeEE
Confidence 543 23456777665433 355322221 11 22 55555777766543322 3468999998776555
Q ss_pred cc
Q 001895 378 TK 379 (999)
Q Consensus 378 v~ 379 (999)
+.
T Consensus 365 l~ 366 (693)
T 3iuj_A 365 VA 366 (693)
T ss_dssp EC
T ss_pred ee
Confidence 43
No 152
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=78.81 E-value=1.5 Score=51.90 Aligned_cols=68 Identities=21% Similarity=0.211 Sum_probs=42.3
Q ss_pred CCeEEEecCCCCH-----------------HHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCC-----hHHHHHHHH
Q 001895 698 APIKIFGDLHGQF-----------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQH-----SLETITLLL 755 (999)
Q Consensus 698 ~~i~vvGDiHG~~-----------------~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~-----s~evl~ll~ 755 (999)
-.|+.++|+||.+ ..+..+++.+.-...+ .-+|..||++++.+. ...++.+|-
T Consensus 30 l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~-----~l~l~~GD~~~gs~~~~~~~~~~~~~~ln 104 (552)
T 2z1a_A 30 LTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKN-----PLFLDAGDVFQGTLYFNQYRGLADRYFMH 104 (552)
T ss_dssp EEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSS-----EEEEECSCCSSSSHHHHHHTTHHHHHHHH
T ss_pred EEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCC-----EEEEeCCCCCCCcHHHHHhCCcHHHHHHH
Confidence 4588999999864 3566666654311111 145679999997653 234555555
Q ss_pred HhhhcCCCCEEEecCCcccc
Q 001895 756 ALKVEYPNNVHLIRGNHEAA 775 (999)
Q Consensus 756 ~lk~~~P~~v~llrGNHE~~ 775 (999)
.+. + -++..||||..
T Consensus 105 ~lg---~--d~~~lGNHEfd 119 (552)
T 2z1a_A 105 RLR---Y--RAMALGNHEFD 119 (552)
T ss_dssp HTT---C--CEEECCGGGGT
T ss_pred hcC---C--Ccccccccccc
Confidence 542 2 26678999973
No 153
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=78.62 E-value=80 Score=35.12 Aligned_cols=155 Identities=14% Similarity=0.040 Sum_probs=73.6
Q ss_pred CEEEEEcccCCCCCCcCcEEEEecC--CCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECC
Q 001895 185 TMVVIQGGIGPAGLSAEDLHVLDLT--QQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTA 262 (999)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~vyD~~--t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~ 262 (999)
..|++.|+.+ ..+.+||+. +.. .-..+... ..+..-.+++...++.+++.|+.++ .++.||+.
T Consensus 115 ~~l~~~~~~d------g~v~iwd~~~~~~~-~~~~~~~~---~~~~~v~~~~~sp~~~~l~~~~~~g-----~v~~~~~~ 179 (450)
T 2vdu_B 115 SRLIACADSD------KSLLVFDVDKTSKN-VLKLRKRF---CFSKRPNAISIAEDDTTVIIADKFG-----DVYSIDIN 179 (450)
T ss_dssp SEEEEEEGGG------TEEEEEEECSSSSS-CEEEEEEE---ECSSCEEEEEECTTSSEEEEEETTS-----EEEEEETT
T ss_pred CEEEEEECCC------CeEEEEECcCCCCc-eeeeeecc---cCCCCceEEEEcCCCCEEEEEeCCC-----cEEEEecC
Confidence 3556777642 568889987 432 12222110 0111122333333445666676543 67888886
Q ss_pred CCCceEEE--cccCCCCCCCccceEEEEEeC---CEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCccee
Q 001895 263 AKPYEWRK--LEPEGEGPPPCMYATASARSD---GLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQH 337 (999)
Q Consensus 263 s~~~~W~~--v~~~~~~P~~r~~~~a~~~~~---~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~h 337 (999)
+. .... +..... ............+ +.+++.|+.++. +..++..+. ........+. ... -.
T Consensus 180 ~~--~~~~~~~~~~~~--h~~~v~~~~~sp~~~~~~~l~s~~~d~~------i~vwd~~~~-~~~~~~~~~h--~~~-v~ 245 (450)
T 2vdu_B 180 SI--PEEKFTQEPILG--HVSMLTDVHLIKDSDGHQFIITSDRDEH------IKISHYPQC-FIVDKWLFGH--KHF-VS 245 (450)
T ss_dssp SC--CCSSCCCCCSEE--CSSCEEEEEEEECTTSCEEEEEEETTSC------EEEEEESCT-TCEEEECCCC--SSC-EE
T ss_pred Cc--ccccccceeeec--ccCceEEEEEcCCCCCCcEEEEEcCCCc------EEEEECCCC-ceeeeeecCC--CCc-eE
Confidence 65 2111 000000 0011222233446 788888886532 333333322 1122212121 111 12
Q ss_pred EEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEE
Q 001895 338 AAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (999)
Q Consensus 338 sav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~ 377 (999)
++++.++.+++.|+.+ ..|.+||+.+++...
T Consensus 246 ~~~~sd~~~l~s~~~d---------~~v~vwd~~~~~~~~ 276 (450)
T 2vdu_B 246 SICCGKDYLLLSAGGD---------DKIFAWDWKTGKNLS 276 (450)
T ss_dssp EEEECSTTEEEEEESS---------SEEEEEETTTCCEEE
T ss_pred EEEECCCCEEEEEeCC---------CeEEEEECCCCcEee
Confidence 2233377778887742 458899999887544
No 154
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=78.25 E-value=50 Score=35.76 Aligned_cols=162 Identities=10% Similarity=0.013 Sum_probs=73.2
Q ss_pred CEEEEEcccCCCCCCcCcEEEEecCCCCCc---eEEEeecCCCC-CCCcccEEEEECC-cEEEEEccCCCCCCCCeEEEE
Q 001895 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPR---WHRVVVQGPGP-GPRYGHVMALVGQ-RYLMAIGGNDGKRPLADVWAL 259 (999)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~vyD~~t~t~k---W~~v~~~g~~P-~~R~~h~~~v~~~-~~Lyv~GG~~g~~~~ndv~~y 259 (999)
+.+++.|+.+ ..+.+||+.+.... +..... .... ....-.+++...+ ..+++.|+.++ .+..|
T Consensus 126 ~~~l~s~~~d------g~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----~v~iw 193 (416)
T 2pm9_A 126 DNVLASGGNN------GEIFIWDMNKCTESPSNYTPLTP-GQSMSSVDEVISLAWNQSLAHVFASAGSSN-----FASIW 193 (416)
T ss_dssp TTBEEEECSS------SCEEBCBTTTTSSCTTTCCCBCC-CCSCCSSCCCCEEEECSSCTTEEEEESSSS-----CEEEE
T ss_pred CCEEEEEcCC------CeEEEEECCCCcccccccccccc-ccccCCCCCeeEEEeCCCCCcEEEEEcCCC-----CEEEE
Confidence 5666677642 56899999874200 001100 0111 1112223333333 35777787765 58899
Q ss_pred ECCCCCceEEEcccCCCCC-CCccceEEEEE-eC-CEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCC-CCCcc
Q 001895 260 DTAAKPYEWRKLEPEGEGP-PPCMYATASAR-SD-GLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVS-PSPRY 335 (999)
Q Consensus 260 Dl~s~~~~W~~v~~~~~~P-~~r~~~~a~~~-~~-~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~-P~~R~ 335 (999)
|+.+. +....-...... .......++.. .+ ..+++.|+.++.. ..+..++...... . ..... .....
T Consensus 194 d~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~---~~i~~~d~~~~~~-~---~~~~~~~~~~~ 264 (416)
T 2pm9_A 194 DLKAK--KEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDND---PSILIWDLRNANT-P---LQTLNQGHQKG 264 (416)
T ss_dssp ETTTT--EEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSS---CCCCEEETTSTTS-C---SBCCCSCCSSC
T ss_pred ECCCC--CcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCC---ceEEEEeCCCCCC-C---cEEeecCccCc
Confidence 99887 433322211000 00111222223 23 3577777765421 1122333332100 0 00000 11122
Q ss_pred eeEEEEE--CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEE
Q 001895 336 QHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (999)
Q Consensus 336 ~hsav~~--~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~ 376 (999)
-.++++. ++.+++.|+.+ ..|.+||+.+.+-.
T Consensus 265 v~~~~~s~~~~~~l~s~~~d---------g~v~~wd~~~~~~~ 298 (416)
T 2pm9_A 265 ILSLDWCHQDEHLLLSSGRD---------NTVLLWNPESAEQL 298 (416)
T ss_dssp EEEEEECSSCSSCEEEEESS---------SEEEEECSSSCCEE
T ss_pred eeEEEeCCCCCCeEEEEeCC---------CCEEEeeCCCCccc
Confidence 2333443 57788887753 34889998887543
No 155
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=78.09 E-value=72 Score=33.52 Aligned_cols=110 Identities=6% Similarity=-0.060 Sum_probs=58.2
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
..+++||+.++++..+... ....-++++.. ++.+|+...... .....+++||+.+.. ...+.. ......
T Consensus 66 ~~i~~~d~~~~~~~~~~~~----~~~~~~~i~~~~dg~l~v~~~~~~--~~~~~i~~~d~~~~~--~~~~~~--~~~~~~ 135 (333)
T 2dg1_A 66 GNIFKINPETKEIKRPFVS----HKANPAAIKIHKDGRLFVCYLGDF--KSTGGIFAATENGDN--LQDIIE--DLSTAY 135 (333)
T ss_dssp CEEEEECTTTCCEEEEEEC----SSSSEEEEEECTTSCEEEEECTTS--SSCCEEEEECTTSCS--CEEEEC--SSSSCC
T ss_pred CEEEEEeCCCCcEEEEeeC----CCCCcceEEECCCCcEEEEeCCCC--CCCceEEEEeCCCCE--EEEEEc--cCccCC
Confidence 3789999999888776421 11222334433 457777653211 122479999988753 332221 111222
Q ss_pred cccEEEEECCcEEEEEccCC-CCCCCCeEEEEECCCCCceEEEc
Q 001895 229 YGHVMALVGQRYLMAIGGND-GKRPLADVWALDTAAKPYEWRKL 271 (999)
Q Consensus 229 ~~h~~~v~~~~~Lyv~GG~~-g~~~~ndv~~yDl~s~~~~W~~v 271 (999)
.-..+++..++.+|+..... .......+|+||+.+. +...+
T Consensus 136 ~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~--~~~~~ 177 (333)
T 2dg1_A 136 CIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFR--TVTPI 177 (333)
T ss_dssp CEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSC--CEEEE
T ss_pred cccceEECCCCCEEEEeccccccCCCceEEEEeCCCC--EEEEe
Confidence 22334444455677754321 1122457999998876 44443
No 156
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=78.01 E-value=13 Score=39.59 Aligned_cols=181 Identities=13% Similarity=0.109 Sum_probs=84.3
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-C----CEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-G----TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPG 224 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g----~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~ 224 (999)
..+.+||+.+.+.......+ . ...-..+.+ . +.+++.|+.+ ..+.+||+.+.......+. +
T Consensus 44 ~~v~iw~~~~~~~~~~~~~~---~-~~~v~~~~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~--~-- 109 (357)
T 3i2n_A 44 GVIQLYEIQHGDLKLLREIE---K-AKPIKCGTFGATSLQQRYLATGDFG------GNLHIWNLEAPEMPVYSVK--G-- 109 (357)
T ss_dssp EEEEEEEECSSSEEEEEEEE---E-SSCEEEEECTTCCTTTCCEEEEETT------SCEEEECTTSCSSCSEEEC--C--
T ss_pred cEEEEEeCCCCcccceeeec---c-cCcEEEEEEcCCCCCCceEEEecCC------CeEEEEeCCCCCccEEEEE--e--
Confidence 37888999888765443221 1 111122222 2 3666666642 5689999887531122221 0
Q ss_pred CCCCcccEEEEE------CCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEE-----EeCCE
Q 001895 225 PGPRYGHVMALV------GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASA-----RSDGL 293 (999)
Q Consensus 225 P~~R~~h~~~v~------~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~-----~~~~~ 293 (999)
. ...-.++... .++.+++.|+.++ .+..||+.+.......+....... .....++. ..++.
T Consensus 110 ~-~~~v~~~~~~~~~~~s~~~~~l~~~~~d~-----~i~vwd~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~ 181 (357)
T 3i2n_A 110 H-KEIINAIDGIGGLGIGEGAPEIVTGSRDG-----TVKVWDPRQKDDPVANMEPVQGEN--KRDCWTVAFGNAYNQEER 181 (357)
T ss_dssp C-SSCEEEEEEESGGGCC-CCCEEEEEETTS-----CEEEECTTSCSSCSEEECCCTTSC--CCCEEEEEEECCCC-CCC
T ss_pred c-ccceEEEeeccccccCCCccEEEEEeCCC-----eEEEEeCCCCCCcceeccccCCCC--CCceEEEEEEeccCCCCC
Confidence 0 0111111111 2234677777665 578888877521122222211100 11122222 24677
Q ss_pred EEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE----CCEEEEEcCcCCCCCCcccCCeEEEEE
Q 001895 294 LLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV----NARLHVSGGALGGGRMVEDSSSVAVLD 369 (999)
Q Consensus 294 LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~----~~~L~V~GG~~~~~~~~~~~~~v~vyD 369 (999)
+++.|+.++ .+..++.... .-.+... ....-.++++. ++.++++|+.+ ..|.+||
T Consensus 182 ~l~~~~~d~------~i~i~d~~~~-~~~~~~~-----~~~~v~~~~~~~~~~~~~~l~~~~~d---------g~i~i~d 240 (357)
T 3i2n_A 182 VVCAGYDNG------DIKLFDLRNM-ALRWETN-----IKNGVCSLEFDRKDISMNKLVATSLE---------GKFHVFD 240 (357)
T ss_dssp EEEEEETTS------EEEEEETTTT-EEEEEEE-----CSSCEEEEEESCSSSSCCEEEEEEST---------TEEEEEE
T ss_pred EEEEEccCC------eEEEEECccC-ceeeecC-----CCCceEEEEcCCCCCCCCEEEEECCC---------CeEEEEe
Confidence 777777543 3445554433 2222211 11223344444 56677777642 3477888
Q ss_pred CCCC
Q 001895 370 TAAG 373 (999)
Q Consensus 370 ~~t~ 373 (999)
+.+.
T Consensus 241 ~~~~ 244 (357)
T 3i2n_A 241 MRTQ 244 (357)
T ss_dssp EEEE
T ss_pred CcCC
Confidence 7653
No 157
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=77.89 E-value=78 Score=33.98 Aligned_cols=94 Identities=7% Similarity=0.000 Sum_probs=48.8
Q ss_pred CeEEEEECCCCc-------EEEecCCCCCCCCCcCcEEEEe-C----C---EEEEEcccCCCCCCcCcEEEEecCCCCCc
Q 001895 150 ADVHCYDVLTNK-------WSRITPFGEPPTPRAAHVATAV-G----T---MVVIQGGIGPAGLSAEDLHVLDLTQQRPR 214 (999)
Q Consensus 150 ~dv~~yD~~t~~-------W~~l~~~g~~P~pR~~hsa~~~-g----~---~iyv~GG~~~~~~~~~dv~vyD~~t~t~k 214 (999)
..+.+||+.+.. -..+.... .+ -.+++.. + + .+++.|+.+ ..+.+||+.+.. .
T Consensus 36 g~i~iw~~~~~~~~~~~~~~~~~~~h~---~~--v~~~~~~~~~~~~g~~~~~l~s~~~d------g~i~iw~~~~~~-~ 103 (397)
T 1sq9_A 36 GYLKVWDNKLLDNENPKDKSYSHFVHK---SG--LHHVDVLQAIERDAFELCLVATTSFS------GDLLFYRITRED-E 103 (397)
T ss_dssp SEEEEEESBCCTTCCGGGGEEEEECCT---TC--EEEEEEEEEEETTTEEEEEEEEEETT------SCEEEEEEEECT-T
T ss_pred CEEEEEECCCcccccCCCcceEEecCC---Cc--EEEEEEecccccCCccccEEEEEcCC------CCEEEEEccCCc-c
Confidence 378888888765 44443221 11 1222222 3 5 677777642 568999988753 2
Q ss_pred -----eEEEeecCCCCC---CCcccEEEEE----CCcEE-EEEccCCCCCCCCeEEEEECCC
Q 001895 215 -----WHRVVVQGPGPG---PRYGHVMALV----GQRYL-MAIGGNDGKRPLADVWALDTAA 263 (999)
Q Consensus 215 -----W~~v~~~g~~P~---~R~~h~~~v~----~~~~L-yv~GG~~g~~~~ndv~~yDl~s 263 (999)
+..+. ..+. ...-.+++.. .++.+ ++.|+.++ .+..||+.+
T Consensus 104 ~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~ 157 (397)
T 1sq9_A 104 TKKVIFEKLD---LLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKG-----TTYIWKFHP 157 (397)
T ss_dssp TCCEEEEEEC---CSCTTGGGSCEEEEEEECCC----CEEEEEEETTS-----CEEEEEEES
T ss_pred cccccceeec---ccccccCCCcEEEEEEeeccCCCCceEEEEEeCCC-----cEEEEeCCc
Confidence 45443 1111 1222334444 33345 77777765 567777765
No 158
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=77.82 E-value=1.1e+02 Score=36.44 Aligned_cols=202 Identities=14% Similarity=0.033 Sum_probs=99.2
Q ss_pred ccCeEEEEECCCCcEE--EecCCCCCCCCCcCcEEEEe-CC-EEEEEcccCCCCCCcCcEEEEecCC------CCCceEE
Q 001895 148 ATADVHCYDVLTNKWS--RITPFGEPPTPRAAHVATAV-GT-MVVIQGGIGPAGLSAEDLHVLDLTQ------QRPRWHR 217 (999)
Q Consensus 148 ~~~dv~~yD~~t~~W~--~l~~~g~~P~pR~~hsa~~~-g~-~iyv~GG~~~~~~~~~dv~vyD~~t------~t~kW~~ 217 (999)
....+|++++.+.... .+... ...+....+.... ++ .|++...... ....++|++|+.+ ....|..
T Consensus 206 ~~~~v~~~~l~t~~~~~~~v~~~--~~~~~~~~~~~~SpDg~~l~~~~~~~~--~~~~~l~~~d~~~~~~~~~~~~~~~~ 281 (710)
T 2xdw_A 206 LHQKLYYHVLGTDQSEDILCAEF--PDEPKWMGGAELSDDGRYVLLSIREGC--DPVNRLWYCDLQQESNGITGILKWVK 281 (710)
T ss_dssp CCCEEEEEETTSCGGGCEEEECC--TTCTTCEEEEEECTTSCEEEEEEECSS--SSCCEEEEEEGGGSSSSSCSSCCCEE
T ss_pred CCCEEEEEECCCCcccceEEecc--CCCCeEEEEEEEcCCCCEEEEEEEccC--CCccEEEEEECcccccccCCccceEE
Confidence 4457999999887632 22111 1122222233333 33 4544433211 1247899999976 3224777
Q ss_pred EeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCc-eEEEcccCCCCCCCccceEEEEEe-CCEEE
Q 001895 218 VVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPY-EWRKLEPEGEGPPPCMYATASARS-DGLLL 295 (999)
Q Consensus 218 v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~-~W~~v~~~~~~P~~r~~~~a~~~~-~~~Ly 295 (999)
+... .... .......++.||+.+..++ ....++++|+.+... .|+.+.+... ...-..+... ++.++
T Consensus 282 l~~~---~~~~--~~~~s~dg~~l~~~s~~~~--~~~~l~~~d~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~lv 350 (710)
T 2xdw_A 282 LIDN---FEGE--YDYVTNEGTVFTFKTNRHS--PNYRLINIDFTDPEESKWKVLVPEHE----KDVLEWVACVRSNFLV 350 (710)
T ss_dssp EECS---SSSC--EEEEEEETTEEEEEECTTC--TTCEEEEEETTSCCGGGCEEEECCCS----SCEEEEEEEETTTEEE
T ss_pred eeCC---CCcE--EEEEeccCCEEEEEECCCC--CCCEEEEEeCCCCCcccceeccCCCC----CCeEEEEEEEcCCEEE
Confidence 7521 1111 1222333447888765432 346799999977521 4877754322 1122223334 77888
Q ss_pred EEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CC-EEEEE-cCcCCCCCCcccCCeEEEEECCC
Q 001895 296 LCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NA-RLHVS-GGALGGGRMVEDSSSVAVLDTAA 372 (999)
Q Consensus 296 vfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~-~L~V~-GG~~~~~~~~~~~~~v~vyD~~t 372 (999)
+....++ ...++.++..+..... .... | ...-.+.... ++ .+++. .+... ...++.||+.+
T Consensus 351 ~~~~~~g----~~~l~~~~~~~g~~~~--~l~~--~-~~~v~~~~~s~d~~~l~~~~ss~~~-------P~~i~~~d~~t 414 (710)
T 2xdw_A 351 LCYLHDV----KNTLQLHDLATGALLK--IFPL--E-VGSVVGYSGQKKDTEIFYQFTSFLS-------PGIIYHCDLTK 414 (710)
T ss_dssp EEEEETT----EEEEEEEETTTCCEEE--EECC--C-SSEEEEEECCTTCSEEEEEEECSSC-------CCEEEEEETTS
T ss_pred EEEEECC----EEEEEEEECCCCCEEE--ecCC--C-CceEEEEecCCCCCEEEEEEeCCCC-------CCEEEEEECCC
Confidence 7766543 3456666653321111 2211 1 1111112111 33 44433 23222 45799999998
Q ss_pred Ce--EEEccc
Q 001895 373 GV--WCDTKS 380 (999)
Q Consensus 373 ~~--W~~v~~ 380 (999)
++ ++.+..
T Consensus 415 g~~~~~~l~~ 424 (710)
T 2xdw_A 415 EELEPRVFRE 424 (710)
T ss_dssp SSCCCEEEEE
T ss_pred CccceEEeee
Confidence 87 665544
No 159
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=77.72 E-value=93 Score=34.61 Aligned_cols=63 Identities=17% Similarity=0.096 Sum_probs=34.5
Q ss_pred cccEEEEECCcEEEEEccCC----CCCCCCeEEEEEC----CCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEecc
Q 001895 229 YGHVMALVGQRYLMAIGGND----GKRPLADVWALDT----AAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 300 (999)
Q Consensus 229 ~~h~~~v~~~~~Lyv~GG~~----g~~~~ndv~~yDl----~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~ 300 (999)
..|++++..++.+|.+|-.. +.....+...... ... ....+.. ...|+.+...++.+|.+|-.
T Consensus 182 ~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~--~i~~va~-------G~~ht~~l~~~G~v~~wG~n 252 (406)
T 4d9s_A 182 AEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGE--KMSMVAC-------GWRHTISVSYSGALYTYGWS 252 (406)
T ss_dssp SSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTC--CEEEEEE-------CSSEEEEEETTCCEEEEECC
T ss_pred CCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCc--eEEEEEE-------CCCcEEEEcCCCCEEEeeCC
Confidence 46888888877999999542 1111111111110 001 2222221 24567777778999999853
No 160
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=77.14 E-value=30 Score=37.34 Aligned_cols=93 Identities=15% Similarity=0.137 Sum_probs=48.8
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe----CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV----GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~----g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P 225 (999)
..+.+||+.+.+-...... +.+. .+.... ++.+++.|+.+ ..+.+||+.+.... ..+. .
T Consensus 122 ~~i~iwd~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~------~~v~~~d~~~~~~~-~~~~---~-- 184 (408)
T 4a11_B 122 KTLKVWDTNTLQTADVFNF---EETV--YSHHMSPVSTKHCLVAVGTRG------PKVQLCDLKSGSCS-HILQ---G-- 184 (408)
T ss_dssp SEEEEEETTTTEEEEEEEC---SSCE--EEEEECSSCSSCCEEEEEESS------SSEEEEESSSSCCC-EEEC---C--
T ss_pred CeEEEeeCCCCccceeccC---CCce--eeeEeecCCCCCcEEEEEcCC------CeEEEEeCCCccee-eeec---C--
Confidence 4788899988765544332 1111 122222 23466666642 57999999875311 1221 0
Q ss_pred CCCcccEEEEECC-cEEEEEccCCCCCCCCeEEEEECCCC
Q 001895 226 GPRYGHVMALVGQ-RYLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 226 ~~R~~h~~~v~~~-~~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
....-.+++...+ .++++.|+.++ .+..||+.+.
T Consensus 185 ~~~~v~~~~~~~~~~~ll~~~~~dg-----~i~i~d~~~~ 219 (408)
T 4a11_B 185 HRQEILAVSWSPRYDYILATASADS-----RVKLWDVRRA 219 (408)
T ss_dssp CCSCEEEEEECSSCTTEEEEEETTS-----CEEEEETTCS
T ss_pred CCCcEEEEEECCCCCcEEEEEcCCC-----cEEEEECCCC
Confidence 1111122333333 23788888766 4788888665
No 161
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=76.93 E-value=29 Score=38.03 Aligned_cols=159 Identities=13% Similarity=0.028 Sum_probs=75.3
Q ss_pred EEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCC
Q 001895 186 MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKP 265 (999)
Q Consensus 186 ~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~ 265 (999)
.+++.|+.+ ..+.+||+.+.. ....- ........-.+++...++.+++.|+.++ .+..||+.+.
T Consensus 145 ~~l~s~~~d------g~i~iwd~~~~~--~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~- 208 (402)
T 2aq5_A 145 NVLLSAGCD------NVILVWDVGTGA--AVLTL--GPDVHPDTIYSVDWSRDGALICTSCRDK-----RVRVIEPRKG- 208 (402)
T ss_dssp TEEEEEETT------SCEEEEETTTTE--EEEEE--CTTTCCSCEEEEEECTTSSCEEEEETTS-----EEEEEETTTT-
T ss_pred CEEEEEcCC------CEEEEEECCCCC--ccEEE--ecCCCCCceEEEEECCCCCEEEEEecCC-----cEEEEeCCCC-
Confidence 466666642 469999998742 22211 0011112223333433445777777664 6899999887
Q ss_pred ceEEEcc-cCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCe-EEEEECCCCCCCCcceeEEEEE-
Q 001895 266 YEWRKLE-PEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGR-WEWAIAPGVSPSPRYQHAAVFV- 342 (999)
Q Consensus 266 ~~W~~v~-~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~-W~w~~~~g~~P~~R~~hsav~~- 342 (999)
+-...- .... .......+...++.+++.|.... ....+..++...... ....... ....-.++++.
T Consensus 209 -~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~g~~~~---~d~~i~iwd~~~~~~~~~~~~~~----~~~~v~~~~~s~ 277 (402)
T 2aq5_A 209 -TVVAEKDRPHE---GTRPVHAVFVSEGKILTTGFSRM---SERQVALWDTKHLEEPLSLQELD----TSSGVLLPFFDP 277 (402)
T ss_dssp -EEEEEEECSSC---SSSCCEEEECSTTEEEEEEECTT---CCEEEEEEETTBCSSCSEEEECC----CCSSCEEEEEET
T ss_pred -ceeeeeccCCC---CCcceEEEEcCCCcEEEEeccCC---CCceEEEEcCccccCCceEEecc----CCCceeEEEEcC
Confidence 332221 1111 01123334445788887773211 122344444433211 1111111 11112233333
Q ss_pred -CCEEEEEcCcCCCCCCcccCCeEEEEECCCCe--EEEccc
Q 001895 343 -NARLHVSGGALGGGRMVEDSSSVAVLDTAAGV--WCDTKS 380 (999)
Q Consensus 343 -~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~--W~~v~~ 380 (999)
+..|++.|+.+ ..|.+||+.+.+ ...+..
T Consensus 278 ~~~~l~~~g~~d---------g~i~i~d~~~~~~~~~~l~~ 309 (402)
T 2aq5_A 278 DTNIVYLCGKGD---------SSIRYFEITSEAPFLHYLSM 309 (402)
T ss_dssp TTTEEEEEETTC---------SCEEEEEECSSTTCEEEEEE
T ss_pred CCCEEEEEEcCC---------CeEEEEEecCCCcceEeecc
Confidence 34566677542 348888888776 444433
No 162
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=76.64 E-value=60 Score=38.20 Aligned_cols=203 Identities=12% Similarity=0.008 Sum_probs=102.0
Q ss_pred cCeEEEEECCC------CcEEEec-CCCCCCCCCcCcEEEEeCCEEEEEcccCCCC-C-CcCcEEEEecC-CCC-CceEE
Q 001895 149 TADVHCYDVLT------NKWSRIT-PFGEPPTPRAAHVATAVGTMVVIQGGIGPAG-L-SAEDLHVLDLT-QQR-PRWHR 217 (999)
Q Consensus 149 ~~dv~~yD~~t------~~W~~l~-~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~-~-~~~dv~vyD~~-t~t-~kW~~ 217 (999)
..+++.+|+.+ ...+.+. .. .......+..-+++.+++....... . ...++|++|+. +.. .+...
T Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~ 235 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSAVRELSDDA----HRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRT 235 (662)
T ss_dssp EEEEEEEETTSTTTTCGGGSEESSCSC----SSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEE
T ss_pred eeEEEEEECCCCccccCCceeEEEecC----CCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEE
Confidence 35899999988 6766664 22 1111111111234444443322211 1 12579999998 431 02333
Q ss_pred EeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCC---CCCcc-ceEEEEEeCCE
Q 001895 218 VVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEG---PPPCM-YATASARSDGL 293 (999)
Q Consensus 218 v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~---P~~r~-~~~a~~~~~~~ 293 (999)
+... . ...-...+...++++|+.+..++ ...+|++|+.+. +|..+...... |.-.. ........+++
T Consensus 236 l~~~---~-~~~~~~~~~spdg~l~~~~~~~~---~~~l~~~~~~~~--~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~ 306 (662)
T 3azo_A 236 LLGG---P-EEAIAQAEWAPDGSLIVATDRTG---WWNLHRVDPATG--AATQLCRREEEFAGPLWTPGMRWFAPLANGL 306 (662)
T ss_dssp EEEE---T-TBCEEEEEECTTSCEEEEECTTS---SCEEEEECTTTC--CEEESSCCSSBSSCCCCSTTCCSEEECTTSC
T ss_pred eCCC---C-CceEcceEECCCCeEEEEECCCC---CeEEEEEECCCC--ceeecccccccccCccccccCceEeEeCCCE
Confidence 3311 0 11222333333446777666554 347999999888 88887653221 10000 11122223677
Q ss_pred EEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEE-EEECCEEEEEcCcCCCCCCcccCCeEEEEECCC
Q 001895 294 LLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAA-VFVNARLHVSGGALGGGRMVEDSSSVAVLDTAA 372 (999)
Q Consensus 294 LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsa-v~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t 372 (999)
+++.+.. + ...+|.++.... . ....... . ...... ..-++.+++..+... ....+|.+|+.+
T Consensus 307 ~~~~~~~-~----~~~l~~~d~~~~-~--~~~l~~~--~-~~~~~~~s~~~~~~~~~~~~~~------~~~~i~~~d~~~ 369 (662)
T 3azo_A 307 IAVVHGK-G----AAVLGILDPESG-E--LVDAAGP--W-TEWAATLTVSGTRAVGVAASPR------TAYEVVELDTVT 369 (662)
T ss_dssp EEEEEBS-S----SCEEEEEETTTT-E--EEECCSS--C-CEEEEEEEEETTEEEEEEEETT------EEEEEEEEETTT
T ss_pred EEEEEEc-C----ccEEEEEECCCC-c--EEEecCC--C-CeEEEEEecCCCEEEEEEcCCC------CCCEEEEEECCC
Confidence 7776654 2 346777776544 3 2333221 1 112233 344666666544321 135699999999
Q ss_pred CeEEEcccC
Q 001895 373 GVWCDTKSV 381 (999)
Q Consensus 373 ~~W~~v~~~ 381 (999)
++...+...
T Consensus 370 g~~~~l~~~ 378 (662)
T 3azo_A 370 GRARTIGAR 378 (662)
T ss_dssp CCEEEEESC
T ss_pred CceEEeecC
Confidence 998877543
No 163
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=76.61 E-value=76 Score=33.02 Aligned_cols=178 Identities=12% Similarity=0.063 Sum_probs=80.6
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCc
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~ 229 (999)
.+..++............ ........... .+..++.|+.+ ..+.+||+... ..... .......
T Consensus 109 ~i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~s~s~d------~~~~~~d~~~~---~~~~~---~~~~~~~ 172 (340)
T 4aow_A 109 TLRLWDLTTGTTTRRFVG----HTKDVLSVAFSSDNRQIVSGSRD------KTIKLWNTLGV---CKYTV---QDESHSE 172 (340)
T ss_dssp EEEEEETTTTEEEEEEEC----CSSCEEEEEECTTSSCEEEEETT------SCEEEECTTSC---EEEEE---CSSSCSS
T ss_pred cceEEeecccceeeeecC----CCCceeEEEEeecCccceeecCC------CeEEEEEeCCC---ceEEE---EeccccC
Confidence 567777777655444332 11111112222 33555566532 46778887653 22211 1111111
Q ss_pred ccEEEEE---CCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCC
Q 001895 230 GHVMALV---GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVP 306 (999)
Q Consensus 230 ~h~~~v~---~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~ 306 (999)
.-..+.+ ....+++.|+.++ .+..||+.+. +....-.... ......+...++.+++.|+.++.
T Consensus 173 ~v~~~~~~~~~~~~~~~s~~~d~-----~i~i~d~~~~--~~~~~~~~h~----~~v~~~~~s~~~~~l~s~s~Dg~--- 238 (340)
T 4aow_A 173 WVSCVRFSPNSSNPIIVSCGWDK-----LVKVWNLANC--KLKTNHIGHT----GYLNTVTVSPDGSLCASGGKDGQ--- 238 (340)
T ss_dssp CEEEEEECSCSSSCEEEEEETTS-----CEEEEETTTT--EEEEEECCCS----SCEEEEEECTTSSEEEEEETTCE---
T ss_pred cccceEEccCCCCcEEEEEcCCC-----EEEEEECCCC--ceeeEecCCC----CcEEEEEECCCCCEEEEEeCCCe---
Confidence 1112222 2224666676654 4788899877 4332211111 11112223346778888876542
Q ss_pred cccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEE
Q 001895 307 LASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (999)
Q Consensus 307 ~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~ 376 (999)
+..++............ ...-.++++..+..++.|+.+ ..|.+||+++..-.
T Consensus 239 ---i~iwd~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~~~~d---------~~i~iwd~~~~~~~ 290 (340)
T 4aow_A 239 ---AMLWDLNEGKHLYTLDG------GDIINALCFSPNRYWLCAATG---------PSIKIWDLEGKIIV 290 (340)
T ss_dssp ---EEEEETTTTEEEEEEEC------SSCEEEEEECSSSSEEEEEET---------TEEEEEETTTTEEE
T ss_pred ---EEEEEeccCceeeeecC------CceEEeeecCCCCceeeccCC---------CEEEEEECCCCeEE
Confidence 33344433311111111 111233444445455566542 34888998877543
No 164
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=76.50 E-value=44 Score=40.07 Aligned_cols=243 Identities=11% Similarity=-0.006 Sum_probs=116.5
Q ss_pred cCeEEEEECCCCcEEEecCCCCCC-CCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCC
Q 001895 149 TADVHCYDVLTNKWSRITPFGEPP-TPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (999)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P-~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P 225 (999)
...+|+.+.....|+.+......- ..........+ +++.++|.-.. .+.....++++|+.+.. ... ....+
T Consensus 93 ~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~-~G~~~~~i~v~dl~tg~--~~~---~~~~~ 166 (695)
T 2bkl_A 93 KAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKP-NAADEAVLHVIDVDSGE--WSK---VDVIE 166 (695)
T ss_dssp SCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEE-TTCSCCEEEEEETTTCC--BCS---SCCBS
T ss_pred EEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECC-CCCceEEEEEEECCCCC--CcC---CcccC
Confidence 457899988888888875421000 00011122222 44444443221 12223589999998863 320 11122
Q ss_pred CCCcccEEEEECCcEEEEEccCCCC--------CCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEE
Q 001895 226 GPRYGHVMALVGQRYLMAIGGNDGK--------RPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLC 297 (999)
Q Consensus 226 ~~R~~h~~~v~~~~~Lyv~GG~~g~--------~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~Lyvf 297 (999)
.... ...+...+++.++++..+.. ....++|++++.+....-..+..... .+..........+++.+++
T Consensus 167 ~~~~-~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~--~~~~~~~~~~SpDG~~l~~ 243 (695)
T 2bkl_A 167 GGKY-ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTG--DPTTFLQSDLSRDGKYLFV 243 (695)
T ss_dssp CCTT-CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCC--CTTCEEEEEECTTSCCEEE
T ss_pred cccc-cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCC--CCEEEEEEEECCCCCEEEE
Confidence 2221 23334444455666655432 23567999999876211122221111 1112223334446665565
Q ss_pred eccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCe---
Q 001895 298 GGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV--- 374 (999)
Q Consensus 298 GG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~--- 374 (999)
...+.. ...++|.++.. ++.|....... . .....+..++.+|+....+. ....|+++|+.+..
T Consensus 244 ~~~~~~--~~~~l~~~~~~-~~~~~~l~~~~----~-~~~~~~~~~g~l~~~s~~~~------~~~~l~~~d~~~~~~~~ 309 (695)
T 2bkl_A 244 YILRGW--SENDVYWKRPG-EKDFRLLVKGV----G-AKYEVHAWKDRFYVLTDEGA------PRQRVFEVDPAKPARAS 309 (695)
T ss_dssp EEEETT--TEEEEEEECTT-CSSCEEEEECS----S-CCEEEEEETTEEEEEECTTC------TTCEEEEEBTTBCSGGG
T ss_pred EEeCCC--CceEEEEEcCC-CCceEEeecCC----C-ceEEEEecCCcEEEEECCCC------CCCEEEEEeCCCCCccC
Confidence 554331 24566666433 33454443221 1 11222335666655543321 14679999998765
Q ss_pred EEEcccCcCCCCCCCcccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCCCcCcCcEEEeec
Q 001895 375 WCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAED 438 (999)
Q Consensus 375 W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~~~~l~Dv~~ld~ 438 (999)
|..+-... + ...-......+++|++.+..++ ..-+|.++.
T Consensus 310 ~~~l~~~~--------------------~-~~~l~~~~~~~~~lv~~~~~dg---~~~l~~~~~ 349 (695)
T 2bkl_A 310 WKEIVPED--------------------S-SASLLSVSIVGGHLSLEYLKDA---TSEVRVATL 349 (695)
T ss_dssp CEEEECCC--------------------S-SCEEEEEEEETTEEEEEEEETT---EEEEEEEET
T ss_pred CeEEecCC--------------------C-CCeEEEEEEECCEEEEEEEECC---EEEEEEEeC
Confidence 87765430 0 1111233344888887765443 234666663
No 165
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=76.09 E-value=69 Score=32.31 Aligned_cols=177 Identities=10% Similarity=-0.031 Sum_probs=84.3
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
+.+++||..+.....+... ....-++++.. ++.+|+... + ..+++||..+.. ..... .....
T Consensus 46 ~~i~~~~~~~~~~~~~~~~----~~~~p~~i~~~~~g~l~v~~~-~------~~i~~~d~~~~~--~~~~~----~~~~~ 108 (270)
T 1rwi_B 46 GRVVKLATGSTGTTVLPFN----GLYQPQGLAVDGAGTVYVTDF-N------NRVVTLAAGSNN--QTVLP----FDGLN 108 (270)
T ss_dssp CEEEEECC-----EECCCC----SCCSCCCEEECTTCCEEEEET-T------TEEEEECTTCSC--CEECC----CCSCS
T ss_pred CcEEEecCCCcccceEeeC----CcCCcceeEECCCCCEEEEcC-C------CEEEEEeCCCce--Eeeee----cCCcC
Confidence 3677888777655444321 11122344544 347777754 1 468999987752 22221 11112
Q ss_pred cccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcc
Q 001895 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (999)
Q Consensus 229 ~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~ 308 (999)
.-+++++..++.||+....+ ..+++||..+. .......... ..-...+...++++|+.... ..
T Consensus 109 ~p~~i~~~~~g~l~v~~~~~-----~~i~~~~~~~~--~~~~~~~~~~----~~p~~i~~~~~g~l~v~~~~------~~ 171 (270)
T 1rwi_B 109 YPEGLAVDTQGAVYVADRGN-----NRVVKLAAGSK--TQTVLPFTGL----NDPDGVAVDNSGNVYVTDTD------NN 171 (270)
T ss_dssp SEEEEEECTTCCEEEEEGGG-----TEEEEECTTCC--SCEECCCCSC----CSCCCEEECTTCCEEEEEGG------GT
T ss_pred CCcceEECCCCCEEEEECCC-----CEEEEEECCCc--eeEeeccccC----CCceeEEEeCCCCEEEEECC------CC
Confidence 23455555455788875432 36888887665 3333221111 01111222335778886542 13
Q ss_pred cEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCe
Q 001895 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (999)
Q Consensus 309 d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~ 374 (999)
.++.++........ .... ....-.++++- ++.|||.... .+.|.+||+.+..
T Consensus 172 ~i~~~~~~~~~~~~--~~~~---~~~~p~~i~~d~~g~l~v~~~~---------~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 172 RVVKLEAESNNQVV--LPFT---DITAPWGIAVDEAGTVYVTEHN---------TNQVVKLLAGSTT 224 (270)
T ss_dssp EEEEECTTTCCEEE--CCCS---SCCSEEEEEECTTCCEEEEETT---------TSCEEEECTTCSC
T ss_pred EEEEEecCCCceEe--eccc---CCCCceEEEECCCCCEEEEECC---------CCcEEEEcCCCCc
Confidence 46666655442111 1111 11122333333 4588887542 2458899987654
No 166
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=76.05 E-value=74 Score=32.59 Aligned_cols=177 Identities=7% Similarity=-0.011 Sum_probs=79.7
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
..+.+||+.+..-...... ....-.+++.. ++.+++.|+.+ ..+.+|++.... ....+. .+....
T Consensus 39 g~v~vw~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~d------g~i~~~~~~~~~-~~~~~~---~~~~~~ 104 (313)
T 3odt_A 39 GTVRLWSKDDQWLGTVVYT----GQGFLNSVCYDSEKELLLFGGKD------TMINGVPLFATS-GEDPLY---TLIGHQ 104 (313)
T ss_dssp SEEEEEEESSSEEEEEEEE----CSSCEEEEEEETTTTEEEEEETT------SCEEEEETTCCT-TSCC-C---EECCCS
T ss_pred CcEEEEECCCCEEEEEeec----CCccEEEEEECCCCCEEEEecCC------CeEEEEEeeecC-CCCccc---chhhcc
Confidence 3788888877654433221 11111222333 44666666642 467788876531 111111 111112
Q ss_pred cccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcc
Q 001895 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (999)
Q Consensus 229 ~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~ 308 (999)
..-....+.+ .+++.|+.++ .+..||.... .+...... . .....+....++.+++.|+.++.
T Consensus 105 ~~i~~~~~~~-~~l~~~~~d~-----~i~~~d~~~~--~~~~~~~~-~----~v~~~~~~~~~~~~l~~~~~d~~----- 166 (313)
T 3odt_A 105 GNVCSLSFQD-GVVISGSWDK-----TAKVWKEGSL--VYNLQAHN-A----SVWDAKVVSFSENKFLTASADKT----- 166 (313)
T ss_dssp SCEEEEEEET-TEEEEEETTS-----EEEEEETTEE--EEEEECCS-S----CEEEEEEEETTTTEEEEEETTSC-----
T ss_pred cCEEEEEecC-CEEEEEeCCC-----CEEEEcCCcE--EEecccCC-C----ceeEEEEccCCCCEEEEEECCCC-----
Confidence 2222333344 4667777665 5777773322 33222111 1 12222222325666777776543
Q ss_pred cEEEEecCCCCeEEEEECCCCCCCCcceeEEEE-ECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeE
Q 001895 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVF-VNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (999)
Q Consensus 309 d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~-~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W 375 (999)
+..++.. ..... .... ....-.++++ -++. ++.|+. ...+.+||+.+.+-
T Consensus 167 -i~i~d~~---~~~~~-~~~~--~~~~i~~~~~~~~~~-~~~~~~---------dg~i~i~d~~~~~~ 217 (313)
T 3odt_A 167 -IKLWQND---KVIKT-FSGI--HNDVVRHLAVVDDGH-FISCSN---------DGLIKLVDMHTGDV 217 (313)
T ss_dssp -EEEEETT---EEEEE-ECSS--CSSCEEEEEEEETTE-EEEEET---------TSEEEEEETTTCCE
T ss_pred -EEEEecC---ceEEE-Eecc--CcccEEEEEEcCCCe-EEEccC---------CCeEEEEECCchhh
Confidence 3334321 11111 1111 1122233333 3567 666664 24588999987753
No 167
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=75.83 E-value=99 Score=33.98 Aligned_cols=123 Identities=9% Similarity=0.061 Sum_probs=59.2
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCc
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~ 229 (999)
.+.+||..+.+....-.. ....-.+++.. ++.+++.|+.+ ..+.+||+.+. ..+. .+.....
T Consensus 131 ~i~vwd~~~~~~~~~l~~----h~~~V~~v~~~~~~~~l~sgs~D------~~i~iwd~~~~----~~~~---~~~~h~~ 193 (410)
T 1vyh_C 131 TIKVWDYETGDFERTLKG----HTDSVQDISFDHSGKLLASCSAD------MTIKLWDFQGF----ECIR---TMHGHDH 193 (410)
T ss_dssp CEEEEETTTCCCCEEECC----CSSCEEEEEECTTSSEEEEEETT------SCCCEEETTSS----CEEE---CCCCCSS
T ss_pred eEEEEECCCCcEEEEEec----cCCcEEEEEEcCCCCEEEEEeCC------CeEEEEeCCCC----ceeE---EEcCCCC
Confidence 678888887653322110 00011122222 34667777743 45778888763 2222 1121111
Q ss_pred -ccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEE-cccCCCCCCCccceEEEEEeCCEEEEEeccCC
Q 001895 230 -GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRK-LEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (999)
Q Consensus 230 -~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~-v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~ 302 (999)
-.+++...++..++.|+.++ .+..||+.+. .-.. +.... ..........++.+++.|+.++
T Consensus 194 ~V~~v~~~p~~~~l~s~s~D~-----~i~~wd~~~~--~~~~~~~~h~-----~~v~~~~~~~~g~~l~s~s~D~ 256 (410)
T 1vyh_C 194 NVSSVSIMPNGDHIVSASRDK-----TIKMWEVQTG--YCVKTFTGHR-----EWVRMVRPNQDGTLIASCSNDQ 256 (410)
T ss_dssp CEEEEEECSSSSEEEEEETTS-----EEEEEETTTC--CEEEEEECCS-----SCEEEEEECTTSSEEEEEETTS
T ss_pred CEEEEEEeCCCCEEEEEeCCC-----eEEEEECCCC--cEEEEEeCCC-----ccEEEEEECCCCCEEEEEcCCC
Confidence 12233333335677777765 6888998876 3222 11111 1111122234567777777654
No 168
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=75.76 E-value=1.4e+02 Score=35.72 Aligned_cols=83 Identities=17% Similarity=0.192 Sum_probs=46.6
Q ss_pred CCEEEEEcccC------------CCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEE----CCc--EEEEEc
Q 001895 184 GTMVVIQGGIG------------PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV----GQR--YLMAIG 245 (999)
Q Consensus 184 g~~iyv~GG~~------------~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~----~~~--~Lyv~G 245 (999)
++.||+-.|.. .+..+...++.+|..+...+|+.-......-.-+.....+++ ++. .+++++
T Consensus 254 ~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~ 333 (677)
T 1kb0_A 254 LNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHA 333 (677)
T ss_dssp TTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEEC
T ss_pred CCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEE
Confidence 45777665432 233445679999999887789865422110000111111122 331 466666
Q ss_pred cCCCCCCCCeEEEEECCCCCceEEEc
Q 001895 246 GNDGKRPLADVWALDTAAKPYEWRKL 271 (999)
Q Consensus 246 G~~g~~~~ndv~~yDl~s~~~~W~~v 271 (999)
..++ .++++|..+....|..-
T Consensus 334 ~~~G-----~l~~lD~~tG~~l~~~~ 354 (677)
T 1kb0_A 334 PKNG-----FFFVLDRTNGKFISAKN 354 (677)
T ss_dssp CTTS-----EEEEEETTTCCEEEEEE
T ss_pred CCCC-----EEEEEECCCCCEecccc
Confidence 5544 78899998887777653
No 169
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=75.15 E-value=36 Score=36.32 Aligned_cols=163 Identities=12% Similarity=0.084 Sum_probs=79.2
Q ss_pred CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCccc-EEEEECCcEEEEEccCCCCCCCCeEEEEECC
Q 001895 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGH-VMALVGQRYLMAIGGNDGKRPLADVWALDTA 262 (999)
Q Consensus 184 g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h-~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~ 262 (999)
++..++.|+.+ ..+.+||+......+..+... ......- +++...++.+++.|+.++ .+..||..
T Consensus 118 ~g~~las~s~D------~~v~iwd~~~~~~~~~~~~~~---~~h~~~v~~v~~~p~~~~l~s~s~D~-----~i~iW~~~ 183 (330)
T 2hes_X 118 DGYYLATCSRD------KSVWIWETDESGEEYECISVL---QEHSQDVKHVIWHPSEALLASSSYDD-----TVRIWKDY 183 (330)
T ss_dssp TSCEEEEEETT------SCEEEEECCTTCCCCEEEEEE---CCCSSCEEEEEECSSSSEEEEEETTS-----CEEEEEEE
T ss_pred CCCEEEEEeCC------CEEEEEeccCCCCCeEEEEEe---ccCCCceEEEEECCCCCEEEEEcCCC-----eEEEEECC
Confidence 34666666642 568899985422235444321 1111111 222233345777788775 46677776
Q ss_pred CCCceEEEcccCCCCCCCccceEEEEEe-C--CEEEEEeccCCCCCCcccEEEEecCC---CCeEEEEECCCCCCCCcce
Q 001895 263 AKPYEWRKLEPEGEGPPPCMYATASARS-D--GLLLLCGGRDASSVPLASAYGLAKHR---DGRWEWAIAPGVSPSPRYQ 336 (999)
Q Consensus 263 s~~~~W~~v~~~~~~P~~r~~~~a~~~~-~--~~LyvfGG~~~~~~~~~d~~~~~~~~---~~~W~w~~~~g~~P~~R~~ 336 (999)
+. .|..+...... ...-.++... + +.+++.|+.++. ..+|.+.... ...|........ .....-
T Consensus 184 ~~--~~~~~~~~~~h---~~~v~~~~~~~~~~~~~l~s~s~D~~----v~iw~~~~~~~~~~~~~~~~~~~~~-~h~~~v 253 (330)
T 2hes_X 184 DD--DWECVAVLNGH---EGTVWSSDFDKTEGVFRLCSGSDDST----VRVWKYMGDDEDDQQEWVCEAILPD-VHKRQV 253 (330)
T ss_dssp TT--EEEEEEEECCC---SSCEEEEEECCSSSSCEEEEEETTSC----EEEEEEEEECTTSCEEEEEEEECCS-CCSSCE
T ss_pred CC--CeeEEEEccCC---CCcEEEEEecCCCCeeEEEEEeCCCe----EEEEEecCCCccccceeEEeeeccc-ccccce
Confidence 66 66655433211 0111122222 2 456666776542 3345443321 112332222111 022233
Q ss_pred eEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcc
Q 001895 337 HAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTK 379 (999)
Q Consensus 337 hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~ 379 (999)
.++++..+.+++.||.+ ..|.+||..+.+|..+.
T Consensus 254 ~~v~~s~~~~l~s~~~d---------g~v~iw~~~~~~~~~~~ 287 (330)
T 2hes_X 254 YNVAWGFNGLIASVGAD---------GVLAVYEEVDGEWKVFA 287 (330)
T ss_dssp EEEEECTTSCEEEEETT---------SCEEEEEEETTEEEEEE
T ss_pred EEEEEcCCCEEEEEeCC---------CEEEEEEcCCCceEEEe
Confidence 44444455567777753 23788898888887654
No 170
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=75.06 E-value=1.5 Score=51.35 Aligned_cols=66 Identities=23% Similarity=0.348 Sum_probs=37.1
Q ss_pred CCeEEEecCCCCH------------------HHHHHHHHHhCCCCCCCCccceeEEE-eccccCCCCC-----hHHHHHH
Q 001895 698 APIKIFGDLHGQF------------------GDLMRLFDEYGSPSTAGDIAYIDYLF-LGDYVDRGQH-----SLETITL 753 (999)
Q Consensus 698 ~~i~vvGDiHG~~------------------~~L~~il~~~g~~~~~~~~~~~~~vf-LGDyVDRG~~-----s~evl~l 753 (999)
-.|+.+.|+||++ ..|..+++...-...+ .+++ .||.++.... ...++.+
T Consensus 7 l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~------~llldaGD~~~g~~~~~~~~g~~~~~~ 80 (509)
T 3ive_A 7 VTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKA------TWFFDAGDYFTGPYISSLTKGKAIIDI 80 (509)
T ss_dssp EEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSS------EEEEECSCCSSSSHHHHTTTTHHHHHH
T ss_pred EEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCC------eEEEECCCCCCCchhhhhcCChHHHHH
Confidence 4588899999974 3455555544221111 3444 8999984311 1334444
Q ss_pred HHHhhhcCCCCEEEecCCccc
Q 001895 754 LLALKVEYPNNVHLIRGNHEA 774 (999)
Q Consensus 754 l~~lk~~~P~~v~llrGNHE~ 774 (999)
|-.+. --++..||||.
T Consensus 81 ln~lg-----~D~~tlGNHEf 96 (509)
T 3ive_A 81 MNTMP-----FDAVTIGNHEF 96 (509)
T ss_dssp HTTSC-----CSEECCCGGGG
T ss_pred HHhcC-----CcEEeeccccc
Confidence 43332 22456799995
No 171
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=74.81 E-value=63 Score=33.96 Aligned_cols=99 Identities=13% Similarity=0.196 Sum_probs=53.1
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEE--e-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATA--V-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~--~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~ 226 (999)
..+.+||+.+.....+... ...-.+++. . ++.+++.|+.+ ..+.+||+.+...... +. .
T Consensus 108 g~v~iwd~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~l~~~~~d------g~i~vwd~~~~~~~~~-~~------~ 169 (368)
T 3mmy_A 108 KTAKMWDLSSNQAIQIAQH-----DAPVKTIHWIKAPNYSCVMTGSWD------KTLKFWDTRSSNPMMV-LQ------L 169 (368)
T ss_dssp SEEEEEETTTTEEEEEEEC-----SSCEEEEEEEECSSCEEEEEEETT------SEEEEECSSCSSCSEE-EE------C
T ss_pred CcEEEEEcCCCCceeeccc-----cCceEEEEEEeCCCCCEEEEccCC------CcEEEEECCCCcEEEE-Ee------c
Confidence 4788999998876665332 111122232 2 44777777753 5699999987542222 22 1
Q ss_pred CCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEccc
Q 001895 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEP 273 (999)
Q Consensus 227 ~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~ 273 (999)
.....++..... .+++ ++.+ ..+..||+......+..+..
T Consensus 170 ~~~~~~~~~~~~-~~~~-~~~~-----~~i~~~~~~~~~~~~~~~~~ 209 (368)
T 3mmy_A 170 PERCYCADVIYP-MAVV-ATAE-----RGLIVYQLENQPSEFRRIES 209 (368)
T ss_dssp SSCEEEEEEETT-EEEE-EEGG-----GCEEEEECSSSCEEEEECCC
T ss_pred CCCceEEEecCC-eeEE-EeCC-----CcEEEEEeccccchhhhccc
Confidence 112233334444 4444 3333 25778888776445655543
No 172
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=74.74 E-value=2.4 Score=50.58 Aligned_cols=68 Identities=16% Similarity=0.110 Sum_probs=41.3
Q ss_pred cCCeEEEecCCCCHH---------------------HHHHHHHHhCCCCCCCCccceeEEEeccccCCCC-----ChHHH
Q 001895 697 KAPIKIFGDLHGQFG---------------------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQ-----HSLET 750 (999)
Q Consensus 697 ~~~i~vvGDiHG~~~---------------------~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~-----~s~ev 750 (999)
+-.|+.+.|+||++. .|..+++.+.-.... .-+|..||.++..+ ....+
T Consensus 12 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~-----~l~l~~GD~~~gs~~~~~~~g~~~ 86 (579)
T 3ztv_A 12 ELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKN-----PLVLHAGDAITGTLYFTLFGGSAD 86 (579)
T ss_dssp EEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSS-----EEEEECSCCSCSSHHHHTTTTHHH
T ss_pred EEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCC-----EEEEeCCCCCCCceeeeecCCHHH
Confidence 346889999999854 344455544211111 14666899999653 23445
Q ss_pred HHHHHHhhhcCCCCEEEecCCccc
Q 001895 751 ITLLLALKVEYPNNVHLIRGNHEA 774 (999)
Q Consensus 751 l~ll~~lk~~~P~~v~llrGNHE~ 774 (999)
+.+|-.+.. -++..||||.
T Consensus 87 ~~~ln~lg~-----D~~tlGNHEf 105 (579)
T 3ztv_A 87 AAVMNAGNF-----HYFTLGNHEF 105 (579)
T ss_dssp HHHHHHHTC-----SEEECCSGGG
T ss_pred HHHHHhcCc-----Ceeecccccc
Confidence 666655532 2466899996
No 173
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=73.74 E-value=53 Score=35.19 Aligned_cols=131 Identities=11% Similarity=0.107 Sum_probs=62.2
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
.+.++|+.+..|....... ......-..+.+ ++..++.|+.+ ..+.+||..+.. +..+... ....
T Consensus 39 ~i~iw~~~~~~~~~~~~~~--~~h~~~v~~~~~sp~g~~l~s~s~D------~~v~iw~~~~~~--~~~~~~~---~~h~ 105 (345)
T 3fm0_A 39 RIRIWGTEGDSWICKSVLS--EGHQRTVRKVAWSPCGNYLASASFD------ATTCIWKKNQDD--FECVTTL---EGHE 105 (345)
T ss_dssp CEEEEEEETTEEEEEEEEC--SSCSSCEEEEEECTTSSEEEEEETT------SCEEEEEECCC---EEEEEEE---CCCS
T ss_pred eEEEEEcCCCcceeeeeec--cccCCcEEEEEECCCCCEEEEEECC------CcEEEEEccCCC--eEEEEEc---cCCC
Confidence 5777888888775432210 001111122222 34666677642 467888887643 4443311 1111
Q ss_pred c-ccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCC
Q 001895 229 Y-GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (999)
Q Consensus 229 ~-~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~ 302 (999)
. -.+++...++.+++.|+.++ .+..||+.+.. .+..+....... ......+...++.+++.|+.++
T Consensus 106 ~~v~~v~~sp~~~~l~s~s~D~-----~v~iwd~~~~~-~~~~~~~~~~h~--~~v~~~~~~p~~~~l~s~s~d~ 172 (345)
T 3fm0_A 106 NEVKSVAWAPSGNLLATCSRDK-----SVWVWEVDEED-EYECVSVLNSHT--QDVKHVVWHPSQELLASASYDD 172 (345)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEEECTTS-CEEEEEEECCCC--SCEEEEEECSSSSCEEEEETTS
T ss_pred CCceEEEEeCCCCEEEEEECCC-----eEEEEECCCCC-CeEEEEEecCcC--CCeEEEEECCCCCEEEEEeCCC
Confidence 1 12233333446777788775 47777776541 233222211100 1111222233567777777654
No 174
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=73.52 E-value=44 Score=36.15 Aligned_cols=95 Identities=15% Similarity=0.135 Sum_probs=47.3
Q ss_pred cCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe---CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCC
Q 001895 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV---GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (999)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~---g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P 225 (999)
...+.++|+.+++-...-.. ....-..+.+ +..+++.|+.+ ..+.+||+.+.. .-..+. ..
T Consensus 148 d~~i~iwd~~~~~~~~~~~~-----h~~~V~~~~~~~~~~~~l~s~s~D------~~v~iwd~~~~~-~~~~~~----~~ 211 (344)
T 4gqb_B 148 DICIKVWDLAQQVVLSSYRA-----HAAQVTCVAASPHKDSVFLSCSED------NRILLWDTRCPK-PASQIG----CS 211 (344)
T ss_dssp TSCEEEEETTTTEEEEEECC-----CSSCEEEEEECSSCTTEEEEEETT------SCEEEEETTSSS-CEEECC------
T ss_pred CCeEEEEECCCCcEEEEEcC-----cCCceEEEEecCCCCCceeeeccc------cccccccccccc-eeeeee----cc
Confidence 34688889888753332111 0111112222 33577777642 468899998753 122221 11
Q ss_pred CCCccc-EEEEE-CCcEEEEEccCCCCCCCCeEEEEECCCC
Q 001895 226 GPRYGH-VMALV-GQRYLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 226 ~~R~~h-~~~v~-~~~~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
...... +++.. .+..+++.|+.++ .+..||+.+.
T Consensus 212 ~~~~~~~~~~~~p~~~~~l~sg~~dg-----~v~~wd~~~~ 247 (344)
T 4gqb_B 212 APGYLPTSLAWHPQQSEVFVFGDENG-----TVSLVDTKST 247 (344)
T ss_dssp --CCCEEEEEECSSCTTEEEEEETTS-----EEEEEESCC-
T ss_pred eeeccceeeeecCCCCcceEEeccCC-----cEEEEECCCC
Confidence 111111 22222 2336788888765 5788898776
No 175
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=73.36 E-value=93 Score=32.48 Aligned_cols=102 Identities=18% Similarity=0.152 Sum_probs=49.5
Q ss_pred CeEEEEECCCCcEEEecCCCCCCC--CCcCcEEEEe--CCEEEEEccc--CCCC---CCcCcEEEEecCCCCC--ceEEE
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPT--PRAAHVATAV--GTMVVIQGGI--GPAG---LSAEDLHVLDLTQQRP--RWHRV 218 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~--pR~~hsa~~~--g~~iyv~GG~--~~~~---~~~~dv~vyD~~t~t~--kW~~v 218 (999)
..+++||+.+.+.......+..|. ...-+..+.. +..+|+.+.. .... .....+++||+.+... .....
T Consensus 65 ~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~ 144 (349)
T 1jmx_B 65 GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF 144 (349)
T ss_dssp TEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE
T ss_pred CcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeec
Confidence 478999999887554332211110 1112333443 3356655421 0000 0125799999876310 01111
Q ss_pred eecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCC
Q 001895 219 VVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKP 265 (999)
Q Consensus 219 ~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~ 265 (999)
. .++.-++++.-.++++|+.++ ++++||+.+..
T Consensus 145 ----~--~~~~~~~~~~s~dg~l~~~~~--------~i~~~d~~~~~ 177 (349)
T 1jmx_B 145 ----P--MPRQVYLMRAADDGSLYVAGP--------DIYKMDVKTGK 177 (349)
T ss_dssp ----E--CCSSCCCEEECTTSCEEEESS--------SEEEECTTTCC
T ss_pred ----c--CCCcccceeECCCCcEEEccC--------cEEEEeCCCCc
Confidence 1 122334444444446777432 38999988773
No 176
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=73.34 E-value=92 Score=32.43 Aligned_cols=169 Identities=9% Similarity=0.151 Sum_probs=83.8
Q ss_pred CeEEEEECC-CCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCC
Q 001895 150 ADVHCYDVL-TNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (999)
Q Consensus 150 ~dv~~yD~~-t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~ 227 (999)
..+++||+. ...|...... + ...+.+.. ++.||+.. . ...+++||.. ....|.... +..
T Consensus 117 ~~l~~~d~~g~~~~~~~~~~-----~-~~~~~~~~~~g~l~vgt-~------~~~l~~~d~~-g~~~~~~~~-----~~~ 177 (330)
T 3hxj_A 117 GHLYAINTDGTEKWRFKTKK-----A-IYATPIVSEDGTIYVGS-N------DNYLYAINPD-GTEKWRFKT-----NDA 177 (330)
T ss_dssp SEEEEECTTSCEEEEEECSS-----C-CCSCCEECTTSCEEEEC-T------TSEEEEECTT-SCEEEEEEC-----SSC
T ss_pred CEEEEEcCCCCEEEEEcCCC-----c-eeeeeEEcCCCEEEEEc-C------CCEEEEECCC-CCEeEEEec-----CCC
Confidence 468889987 3357654322 1 12233444 45666632 2 2469999988 434576542 111
Q ss_pred CcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCc
Q 001895 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPL 307 (999)
Q Consensus 228 R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~ 307 (999)
.-.+.+...++.||+.. ..+++|| .+....|+....... ....+...++.||+... .
T Consensus 178 -~~~~~~~d~~g~l~v~t--------~~l~~~d-~~g~~~~~~~~~~~~------~~~~~~~~~g~l~v~t~-------~ 234 (330)
T 3hxj_A 178 -ITSAASIGKDGTIYFGS--------DKVYAIN-PDGTEKWNFYAGYWT------VTRPAISEDGTIYVTSL-------D 234 (330)
T ss_dssp -CCSCCEECTTCCEEEES--------SSEEEEC-TTSCEEEEECCSSCC------CSCCEECTTSCEEEEET-------T
T ss_pred -ceeeeEEcCCCEEEEEe--------CEEEEEC-CCCcEEEEEccCCcc------eeceEECCCCeEEEEcC-------C
Confidence 22233343344677654 4689999 454447876533211 11222233567777421 1
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCC-eEE
Q 001895 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAG-VWC 376 (999)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~-~W~ 376 (999)
..++.++......|... ... ... .+.++. ++.|||... ...+++||+... .|.
T Consensus 235 ~gl~~~~~~g~~~~~~~--~~~---~~~-~~~~~~~~g~l~v~t~----------~ggl~~~d~~g~~~~~ 289 (330)
T 3hxj_A 235 GHLYAINPDGTEKWRFK--TGK---RIE-SSPVIGNTDTIYFGSY----------DGHLYAINPDGTEKWN 289 (330)
T ss_dssp TEEEEECTTSCEEEEEE--CSS---CCC-SCCEECTTSCEEEECT----------TCEEEEECTTSCEEEE
T ss_pred CeEEEECCCCCEeEEee--CCC---Ccc-ccceEcCCCeEEEecC----------CCCEEEECCCCcEEEE
Confidence 34566654333233332 211 111 122333 577777422 235889997433 355
No 177
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=73.25 E-value=1e+02 Score=32.80 Aligned_cols=139 Identities=14% Similarity=0.054 Sum_probs=66.4
Q ss_pred CcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCC
Q 001895 201 EDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPP 280 (999)
Q Consensus 201 ~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~ 280 (999)
..+.+||+.+.. -...- .+ ....-.+++...++.+++.|+.++ .+..||+.+....-+ +... .
T Consensus 164 ~~i~~wd~~~~~--~~~~~-~~---h~~~v~~~~~~~~~~~l~sg~~d~-----~v~~wd~~~~~~~~~-~~~h-~---- 226 (340)
T 1got_B 164 TTCALWDIETGQ--QTTTF-TG---HTGDVMSLSLAPDTRLFVSGACDA-----SAKLWDVREGMCRQT-FTGH-E---- 226 (340)
T ss_dssp SCEEEEETTTTE--EEEEE-CC---CSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCSEEEE-ECCC-S----
T ss_pred CcEEEEECCCCc--EEEEE-cC---CCCceEEEEECCCCCEEEEEeCCC-----cEEEEECCCCeeEEE-EcCC-c----
Confidence 568999998742 22111 11 111122333444446888888776 578889877621111 1111 1
Q ss_pred ccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCc
Q 001895 281 CMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMV 359 (999)
Q Consensus 281 r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~ 359 (999)
......+...++.+++.|+.++. +..++.... .-........ ....-.++++. ++.+++.|+.+
T Consensus 227 ~~v~~v~~~p~~~~l~s~s~d~~------v~iwd~~~~-~~~~~~~~~~--~~~~v~~~~~s~~g~~l~~g~~d------ 291 (340)
T 1got_B 227 SDINAICFFPNGNAFATGSDDAT------CRLFDLRAD-QELMTYSHDN--IICGITSVSFSKSGRLLLAGYDD------ 291 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTSC------EEEEETTTT-EEEEEECCTT--CCSCEEEEEECTTSSEEEEEETT------
T ss_pred CCEEEEEEcCCCCEEEEEcCCCc------EEEEECCCC-cEEEEEccCC--cccceEEEEECCCCCEEEEECCC------
Confidence 11122223346777888876543 333443332 1111111110 11111223333 56778887753
Q ss_pred ccCCeEEEEECCCCe
Q 001895 360 EDSSSVAVLDTAAGV 374 (999)
Q Consensus 360 ~~~~~v~vyD~~t~~ 374 (999)
..|.+||..+.+
T Consensus 292 ---~~i~vwd~~~~~ 303 (340)
T 1got_B 292 ---FNCNVWDALKAD 303 (340)
T ss_dssp ---SEEEEEETTTCC
T ss_pred ---CeEEEEEcccCc
Confidence 348889987654
No 178
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=72.97 E-value=1e+02 Score=32.92 Aligned_cols=181 Identities=12% Similarity=0.013 Sum_probs=88.4
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeC--CEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVG--TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g--~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~ 227 (999)
..+.+||+.+.......... .....-.+++... +.+++.|+.+ ..+.+||+.+. ....+... ....
T Consensus 96 g~i~iwd~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~--~~~~~~~~--~~~~ 163 (383)
T 3ei3_B 96 GDIILWDYDVQNKTSFIQGM--GPGDAITGMKFNQFNTNQLFVSSIR------GATTLRDFSGS--VIQVFAKT--DSWD 163 (383)
T ss_dssp SCEEEEETTSTTCEEEECCC--STTCBEEEEEEETTEEEEEEEEETT------TEEEEEETTSC--EEEEEECC--CCSS
T ss_pred CeEEEEeCCCcccceeeecC--CcCCceeEEEeCCCCCCEEEEEeCC------CEEEEEECCCC--ceEEEecc--CCCC
Confidence 36888999887766554320 0111112333333 3667777642 57889999864 34444311 1111
Q ss_pred CcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCE-EEEEeccCCCCCC
Q 001895 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGL-LLLCGGRDASSVP 306 (999)
Q Consensus 228 R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~-LyvfGG~~~~~~~ 306 (999)
..-.+++...++.+++.|+.++ .+..||+... .-..+..... .........++. +++.|+.++
T Consensus 164 ~~v~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~--~~~~~~~h~~-----~v~~~~~~~~~~~~l~s~~~d~---- 227 (383)
T 3ei3_B 164 YWYCCVDVSVSRQMLATGDSTG-----RLLLLGLDGH--EIFKEKLHKA-----KVTHAEFNPRCDWLMATSSVDA---- 227 (383)
T ss_dssp CCEEEEEEETTTTEEEEEETTS-----EEEEEETTSC--EEEEEECSSS-----CEEEEEECSSCTTEEEEEETTS----
T ss_pred CCeEEEEECCCCCEEEEECCCC-----CEEEEECCCC--EEEEeccCCC-----cEEEEEECCCCCCEEEEEeCCC----
Confidence 2223344444446777777664 7888998554 3333322111 111222223444 777777653
Q ss_pred cccEEEEecCCC---CeEEEEECCCCCCCCcceeEEEEE--CCEEEEEcCcCCCCCCcccCCeEEEEECCCCe
Q 001895 307 LASAYGLAKHRD---GRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (999)
Q Consensus 307 ~~d~~~~~~~~~---~~W~w~~~~g~~P~~R~~hsav~~--~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~ 374 (999)
.+..++.... +...... + ....-.++++. ++.+++.|+.+ ..|.+||+.+.+
T Consensus 228 --~i~iwd~~~~~~~~~~~~~~--~---~~~~v~~~~~s~~~~~~l~~~~~d---------~~i~iwd~~~~~ 284 (383)
T 3ei3_B 228 --TVKLWDLRNIKDKNSYIAEM--P---HEKPVNAAYFNPTDSTKLLTTDQR---------NEIRVYSSYDWS 284 (383)
T ss_dssp --EEEEEEGGGCCSTTCEEEEE--E---CSSCEEEEEECTTTSCEEEEEESS---------SEEEEEETTBTT
T ss_pred --EEEEEeCCCCCcccceEEEe--c---CCCceEEEEEcCCCCCEEEEEcCC---------CcEEEEECCCCc
Confidence 2333433321 1111111 1 11122233333 56777777652 358889987653
No 179
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=72.68 E-value=1.3e+02 Score=34.37 Aligned_cols=114 Identities=13% Similarity=0.135 Sum_probs=54.8
Q ss_pred EEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeC-CEEEEEeccCCCCCCcccEEEEecCCCC
Q 001895 241 LMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSD-GLLLLCGGRDASSVPLASAYGLAKHRDG 319 (999)
Q Consensus 241 Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~-~~LyvfGG~~~~~~~~~d~~~~~~~~~~ 319 (999)
+++.|+.++ .+..||+.+. +-...-..... ............+ +.+++.|+.++ .+..++..+.
T Consensus 175 ~l~~~~~d~-----~v~vwd~~~~--~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg------~i~vwd~~~~- 239 (615)
T 1pgu_A 175 RSMTVGDDG-----SVVFYQGPPF--KFSASDRTHHK-QGSFVRDVEFSPDSGEFVITVGSDR------KISCFDGKSG- 239 (615)
T ss_dssp EEEEEETTT-----EEEEEETTTB--EEEEEECSSSC-TTCCEEEEEECSTTCCEEEEEETTC------CEEEEETTTC-
T ss_pred EEEEEeCCC-----cEEEEeCCCc--ceeeeecccCC-CCceEEEEEECCCCCCEEEEEeCCC------eEEEEECCCC-
Confidence 677777664 6888898765 33221111110 0001122223335 67777777654 2444444332
Q ss_pred eEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEc
Q 001895 320 RWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (999)
Q Consensus 320 ~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v 378 (999)
+...............-.++++.++.+++.|+.+ ..+.+||+.+.+....
T Consensus 240 ~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d---------~~i~~wd~~~~~~~~~ 289 (615)
T 1pgu_A 240 EFLKYIEDDQEPVQGGIFALSWLDSQKFATVGAD---------ATIRVWDVTTSKCVQK 289 (615)
T ss_dssp CEEEECCBTTBCCCSCEEEEEESSSSEEEEEETT---------SEEEEEETTTTEEEEE
T ss_pred CEeEEecccccccCCceEEEEEcCCCEEEEEcCC---------CcEEEEECCCCcEEEE
Confidence 2222210100001111223333377777777652 3588999998865543
No 180
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=72.52 E-value=1.1e+02 Score=32.88 Aligned_cols=180 Identities=14% Similarity=0.133 Sum_probs=80.9
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCC-----ceEEEeecCCC
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRP-----RWHRVVVQGPG 224 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~-----kW~~v~~~g~~ 224 (999)
.+.++|..+......... +.. .-.+++.. ++..++.||.+ ..+.+|++..... .-..+..
T Consensus 87 ~v~vWd~~~~~~~~~~~~---~~~-~v~~~~~sp~g~~lasg~~d------~~i~v~~~~~~~~~~~~~~~~~~~~---- 152 (354)
T 2pbi_B 87 KVIVWDSFTTNKEHAVTM---PCT-WVMACAYAPSGCAIACGGLD------NKCSVYPLTFDKNENMAAKKKSVAM---- 152 (354)
T ss_dssp EEEEEETTTCCEEEEEEC---SSS-CCCEEEECTTSSEEEEESTT------SEEEEEECCCCTTCCSGGGCEEEEE----
T ss_pred eEEEEECCCCCcceEEec---CCC-CEEEEEECCCCCEEEEeeCC------CCEEEEEEeccccccccccceeeec----
Confidence 677888877654433222 111 11222222 44667777753 4677777654210 0011110
Q ss_pred CCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEe-CCEEEEEeccCCC
Q 001895 225 PGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS-DGLLLLCGGRDAS 303 (999)
Q Consensus 225 P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~-~~~LyvfGG~~~~ 303 (999)
....-.++....++..++.|+.++ .+..||+.+. +-...-.... ......+.... ++.+++.|+.++.
T Consensus 153 -h~~~v~~~~~~~~~~~l~t~s~D~-----~v~lwd~~~~--~~~~~~~~h~---~~v~~~~~~~~~~g~~l~sgs~Dg~ 221 (354)
T 2pbi_B 153 -HTNYLSACSFTNSDMQILTASGDG-----TCALWDVESG--QLLQSFHGHG---ADVLCLDLAPSETGNTFVSGGCDKK 221 (354)
T ss_dssp -CSSCEEEEEECSSSSEEEEEETTS-----EEEEEETTTC--CEEEEEECCS---SCEEEEEECCCSSCCEEEEEETTSC
T ss_pred -cCCcEEEEEEeCCCCEEEEEeCCC-----cEEEEeCCCC--eEEEEEcCCC---CCeEEEEEEeCCCCCEEEEEeCCCe
Confidence 001111222233334556666654 6788898876 3322111100 01111111111 3567778876543
Q ss_pred CCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeE
Q 001895 304 SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (999)
Q Consensus 304 ~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W 375 (999)
+..++..+. ...... .+ ....-.++++. ++.+++.|+.++ .|.+||+.+..-
T Consensus 222 ------v~~wd~~~~-~~~~~~-~~---h~~~v~~v~~~p~~~~l~s~s~D~---------~v~lwd~~~~~~ 274 (354)
T 2pbi_B 222 ------AMVWDMRSG-QCVQAF-ET---HESDVNSVRYYPSGDAFASGSDDA---------TCRLYDLRADRE 274 (354)
T ss_dssp ------EEEEETTTC-CEEEEE-CC---CSSCEEEEEECTTSSEEEEEETTS---------CEEEEETTTTEE
T ss_pred ------EEEEECCCC-cEEEEe-cC---CCCCeEEEEEeCCCCEEEEEeCCC---------eEEEEECCCCcE
Confidence 334443332 221111 11 11112233333 567778887533 388899988753
No 181
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=72.09 E-value=1.6e+02 Score=34.54 Aligned_cols=111 Identities=14% Similarity=0.027 Sum_probs=60.7
Q ss_pred CCeEEEEECCC------CCceEEEcc-cCCCCCCCccceEEEEEeCCEEEEEeccCCCCC--CcccEEEEecCCCC---e
Q 001895 253 LADVWALDTAA------KPYEWRKLE-PEGEGPPPCMYATASARSDGLLLLCGGRDASSV--PLASAYGLAKHRDG---R 320 (999)
Q Consensus 253 ~ndv~~yDl~s------~~~~W~~v~-~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~--~~~d~~~~~~~~~~---~ 320 (999)
..+++++|+.+ . +...+. ... ..........+++.+++...+.... ....+|.++...++ .
T Consensus 160 ~~~i~~~~~~~~~~~~~~--~~~~l~~~~~-----~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~ 232 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRS--AVRELSDDAH-----RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFAD 232 (662)
T ss_dssp EEEEEEEETTSTTTTCGG--GSEESSCSCS-----SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEE
T ss_pred eeEEEEEECCCCccccCC--ceeEEEecCC-----CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccc
Confidence 46899999987 5 445554 211 1222233445676666665443221 23567777766444 2
Q ss_pred EEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccC
Q 001895 321 WEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (999)
Q Consensus 321 W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~ 381 (999)
....... ........++. ++++|+.+..++ ...||++|+.+.+|..+...
T Consensus 233 ~~~l~~~----~~~~~~~~~~spdg~l~~~~~~~~-------~~~l~~~~~~~~~~~~l~~~ 283 (662)
T 3azo_A 233 TRTLLGG----PEEAIAQAEWAPDGSLIVATDRTG-------WWNLHRVDPATGAATQLCRR 283 (662)
T ss_dssp EEEEEEE----TTBCEEEEEECTTSCEEEEECTTS-------SCEEEEECTTTCCEEESSCC
T ss_pred cEEeCCC----CCceEcceEECCCCeEEEEECCCC-------CeEEEEEECCCCceeecccc
Confidence 2222111 01122333333 677777765432 24699999999999887653
No 182
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=71.99 E-value=1.3e+02 Score=33.47 Aligned_cols=65 Identities=17% Similarity=0.122 Sum_probs=34.8
Q ss_pred cccEEEEECCcEEEEEccCCCCC----CCCeEEEEECCC--CCceEEEcccCCCCCCCccceEEEEEeCCEEEEEecc
Q 001895 229 YGHVMALVGQRYLMAIGGNDGKR----PLADVWALDTAA--KPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 300 (999)
Q Consensus 229 ~~h~~~v~~~~~Lyv~GG~~g~~----~~ndv~~yDl~s--~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~ 300 (999)
..|++++..++.+|.+|-..... ...+...-.... .......+.. ...|+++...++.+|.+|-.
T Consensus 130 ~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~i~~va~-------G~~hs~alt~~G~v~~wG~n 200 (406)
T 4d9s_A 130 DSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAA-------GAEHTAAVTEDGDLYGWGWG 200 (406)
T ss_dssp SSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTCCEEEEEE-------CSSEEEEEETTSCEEEEECC
T ss_pred hhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEecccCCCcEEEEec-------CCCeEEEEeCCCCEEEeeCC
Confidence 46888888777999999653211 111111110000 0002222221 24677777788999999853
No 183
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=71.73 E-value=1.2e+02 Score=33.02 Aligned_cols=93 Identities=13% Similarity=0.068 Sum_probs=48.5
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
..+.+||+.+.+-...-.. ....-.+++.. ++..++.|+. ...+.+||+.+.. ..... . ...
T Consensus 145 ~~i~iwd~~~~~~~~~~~~----h~~~v~~~~~~p~~~~l~s~s~------d~~v~iwd~~~~~--~~~~~-~----~~~ 207 (393)
T 1erj_A 145 RLIRIWDIENRKIVMILQG----HEQDIYSLDYFPSGDKLVSGSG------DRTVRIWDLRTGQ--CSLTL-S----IED 207 (393)
T ss_dssp SCEEEEETTTTEEEEEECC----CSSCEEEEEECTTSSEEEEEET------TSEEEEEETTTTE--EEEEE-E----CSS
T ss_pred CeEEEEECCCCcEEEEEcc----CCCCEEEEEEcCCCCEEEEecC------CCcEEEEECCCCe--eEEEE-E----cCC
Confidence 4688899988764433211 11111222222 3445555653 2578899998742 22221 1 111
Q ss_pred cccEEEEEC-CcEEEEEccCCCCCCCCeEEEEECCCC
Q 001895 229 YGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 229 ~~h~~~v~~-~~~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
.-.+++... ++.+++.|+.++ .+..||+.+.
T Consensus 208 ~v~~~~~~~~~~~~l~~~s~d~-----~v~iwd~~~~ 239 (393)
T 1erj_A 208 GVTTVAVSPGDGKYIAAGSLDR-----AVRVWDSETG 239 (393)
T ss_dssp CEEEEEECSTTCCEEEEEETTS-----CEEEEETTTC
T ss_pred CcEEEEEECCCCCEEEEEcCCC-----cEEEEECCCC
Confidence 112233332 446788888775 4788898776
No 184
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=70.52 E-value=14 Score=41.32 Aligned_cols=97 Identities=9% Similarity=0.015 Sum_probs=49.3
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
.+.++|+.+.....+.... .....=.+++.. ++.+++.|+.+ ..+.+||+.+.. ...+... -....
T Consensus 143 ~i~lWd~~~~~~~~~~~~~--gH~~~V~~l~f~p~~~~~l~s~s~D------~~v~iwd~~~~~--~~~~~~~--~~~~~ 210 (435)
T 4e54_B 143 DIMLWNFGIKDKPTFIKGI--GAGGSITGLKFNPLNTNQFYASSME------GTTRLQDFKGNI--LRVFASS--DTINI 210 (435)
T ss_dssp CEEEECSSCCSCCEEECCC--SSSCCCCEEEECSSCTTEEEEECSS------SCEEEEETTSCE--EEEEECC--SSCSC
T ss_pred EEEEEECCCCCceeEEEcc--CCCCCEEEEEEeCCCCCEEEEEeCC------CEEEEeeccCCc--eeEEecc--CCCCc
Confidence 6788888766533332210 011111222322 34566666642 468899987642 3333211 11122
Q ss_pred cccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCC
Q 001895 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 229 ~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
...++....++.+++.|+.++ .+..||+...
T Consensus 211 ~~~~~~~~~~~~~l~~g~~dg-----~i~~wd~~~~ 241 (435)
T 4e54_B 211 WFCSLDVSASSRMVVTGDNVG-----NVILLNMDGK 241 (435)
T ss_dssp CCCCEEEETTTTEEEEECSSS-----BEEEEESSSC
T ss_pred cEEEEEECCCCCEEEEEeCCC-----cEeeeccCcc
Confidence 223344444446888888765 5788888654
No 185
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=70.40 E-value=1.3e+02 Score=32.94 Aligned_cols=96 Identities=19% Similarity=0.162 Sum_probs=47.4
Q ss_pred ccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCC
Q 001895 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (999)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~ 227 (999)
....+.++|+.+.+-...... ......+...++.+++.|+.. ..++++|.......-..+. +. .
T Consensus 167 ~Dg~v~iWd~~~~~~~~~~~~-----h~~~v~~~s~~~~~l~sgs~d------~~i~~~d~~~~~~~~~~~~--~h---~ 230 (420)
T 4gga_A 167 SSAEVQLWDVQQQKRLRNMTS-----HSARVGSLSWNSYILSSGSRS------GHIHHHDVRVAEHHVATLS--GH---S 230 (420)
T ss_dssp TTSCEEEEETTTTEEEEEECC-----CSSCEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEE--CC---S
T ss_pred CCCeEEEEEcCCCcEEEEEeC-----CCCceEEEeeCCCEEEEEeCC------CceeEeeecccceeeEEec--cc---c
Confidence 445788899888754333221 112223344456666666642 4678888776421112221 10 1
Q ss_pred CcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCC
Q 001895 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 228 R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
..-.......++..++.|+.++ .+..+|..+.
T Consensus 231 ~~~~~~~~~~~g~~l~s~~~D~-----~v~i~~~~~~ 262 (420)
T 4gga_A 231 QEVCGLRWAPDGRHLASGGNDN-----LVNVWPSAPG 262 (420)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEESSCC
T ss_pred cceeeeeecCCCCeeeeeeccc-----cceEEeeccc
Confidence 1111222223335666677665 4666776554
No 186
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=70.37 E-value=78 Score=34.33 Aligned_cols=188 Identities=15% Similarity=0.149 Sum_probs=83.7
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC-
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR- 228 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R- 228 (999)
..+.++|..+..-...-... .......+..-++..++.||.+ ..+.+||+.+... ..+.++..+
T Consensus 88 ~~v~iWd~~~~~~~~~~~~h---~~~v~~~~~s~~g~~las~~~d------~~v~iw~~~~~~~------~~~~~~~~~~ 152 (380)
T 3iz6_a 88 GRLIVWNALTSQKTHAIKLH---CPWVMECAFAPNGQSVACGGLD------SACSIFNLSSQAD------RDGNMPVSRV 152 (380)
T ss_dssp SEEEEEETTTTEEEEEEECC---CTTCCCCEECTTSSEEEECCSS------SCCEEEECCCCSS------CCCSSTTCCB
T ss_pred CeEEEEECCCCccceEEecC---CCCEEEEEECCCCCEEEEeeCC------CcEEEEECCCCcc------ccCCccceee
Confidence 36788898876543322110 1111111222245677777753 4677888765310 001111111
Q ss_pred -cccEE-----EEEC-CcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEE--eCCEEEEEec
Q 001895 229 -YGHVM-----ALVG-QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASAR--SDGLLLLCGG 299 (999)
Q Consensus 229 -~~h~~-----~v~~-~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~--~~~~LyvfGG 299 (999)
.+|.. .... +...++.|+.|+ .+..||+.+. +-...-.......-.....++.. .++.+++.|+
T Consensus 153 ~~gh~~~v~~~~~~~~~~~~l~s~s~D~-----~i~~wd~~~~--~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs 225 (380)
T 3iz6_a 153 LTGHKGYASSCQYVPDQETRLITGSGDQ-----TCVLWDVTTG--QRISIFGSEFPSGHTADVLSLSINSLNANMFISGS 225 (380)
T ss_dssp CCCCSSCCCCCBCCSSSSSCEEEECTTS-----CEEEECTTTC--CEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEE
T ss_pred ccCCCcceEEEEEecCCCCEEEEECCCC-----cEEEEEcCCC--cEEEEeecccCCCCccCeEEEEeecCCCCEEEEEE
Confidence 12221 1111 123556666654 5778898876 33222111100000111122222 2677888888
Q ss_pred cCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEc
Q 001895 300 RDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (999)
Q Consensus 300 ~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v 378 (999)
.++. +..++....+. ......+. ...-.++++. ++..++.|+.++ .|.++|+.+..-...
T Consensus 226 ~D~~------v~~wd~~~~~~-~~~~~~~h---~~~v~~v~~~p~~~~l~s~s~D~---------~i~lwd~~~~~~~~~ 286 (380)
T 3iz6_a 226 CDTT------VRLWDLRITSR-AVRTYHGH---EGDINSVKFFPDGQRFGTGSDDG---------TCRLFDMRTGHQLQV 286 (380)
T ss_dssp TTSC------EEEEETTTTCC-CCEEECCC---SSCCCEEEECTTSSEEEEECSSS---------CEEEEETTTTEEEEE
T ss_pred CCCe------EEEEECCCCCc-ceEEECCc---CCCeEEEEEecCCCeEEEEcCCC---------eEEEEECCCCcEEEE
Confidence 7653 22333321100 00001110 0111233333 567888887643 388899998865443
No 187
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=69.80 E-value=1.1e+02 Score=31.66 Aligned_cols=187 Identities=10% Similarity=-0.024 Sum_probs=91.1
Q ss_pred cCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeec-CCCCC
Q 001895 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ-GPGPG 226 (999)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~-g~~P~ 226 (999)
.+.+++||+.+. ...+... . ..-++++.. ++.+|+.... ...+++||+.+.. ...+... ...+.
T Consensus 49 ~~~i~~~~~~~~-~~~~~~~----~-~~~~~l~~~~dg~l~v~~~~------~~~i~~~d~~~g~--~~~~~~~~~~~~~ 114 (296)
T 3e5z_A 49 QNRTWAWSDDGQ-LSPEMHP----S-HHQNGHCLNKQGHLIACSHG------LRRLERQREPGGE--WESIADSFEGKKL 114 (296)
T ss_dssp GTEEEEEETTSC-EEEEESS----C-SSEEEEEECTTCCEEEEETT------TTEEEEECSTTCC--EEEEECEETTEEC
T ss_pred CCEEEEEECCCC-eEEEECC----C-CCcceeeECCCCcEEEEecC------CCeEEEEcCCCCc--EEEEeeccCCCCC
Confidence 347899999988 6665432 1 112333433 4567665431 1469999986643 5544311 11111
Q ss_pred CCcccEEEEECCcEEEEE----ccCC------C--CCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEE
Q 001895 227 PRYGHVMALVGQRYLMAI----GGND------G--KRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLL 294 (999)
Q Consensus 227 ~R~~h~~~v~~~~~Lyv~----GG~~------g--~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~L 294 (999)
.+ -..+++-.++.||+. |..+ . ......+|+||.. . +...+..... .....+...++++
T Consensus 115 ~~-~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g--~~~~~~~~~~-----~~~gi~~s~dg~~ 185 (296)
T 3e5z_A 115 NS-PNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G--TLSAPIRDRV-----KPNGLAFLPSGNL 185 (296)
T ss_dssp CC-CCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S--CEEEEECCCS-----SEEEEEECTTSCE
T ss_pred CC-CCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-C--CEEEeecCCC-----CCccEEECCCCCE
Confidence 11 123444445578886 4321 0 1113579999987 4 4444322211 1112223335666
Q ss_pred EEEeccCCCCCCcccEEEEecCCCCeE---EEEECCCCCCCCcceeEEEE-ECCEEEEEcCcCCCCCCcccCCeEEEEEC
Q 001895 295 LLCGGRDASSVPLASAYGLAKHRDGRW---EWAIAPGVSPSPRYQHAAVF-VNARLHVSGGALGGGRMVEDSSSVAVLDT 370 (999)
Q Consensus 295 yvfGG~~~~~~~~~d~~~~~~~~~~~W---~w~~~~g~~P~~R~~hsav~-~~~~L~V~GG~~~~~~~~~~~~~v~vyD~ 370 (999)
++.... ...++.|+...++.. .... ......+ .++++ -+++|||..+ +.|.+||+
T Consensus 186 lv~~~~------~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p---~~i~~d~~G~l~v~~~-----------~~v~~~~~ 244 (296)
T 3e5z_A 186 LVSDTG------DNATHRYCLNARGETEYQGVHF-TVEPGKT---DGLRVDAGGLIWASAG-----------DGVHVLTP 244 (296)
T ss_dssp EEEETT------TTEEEEEEECSSSCEEEEEEEE-CCSSSCC---CSEEEBTTSCEEEEET-----------TEEEEECT
T ss_pred EEEeCC------CCeEEEEEECCCCcCcCCCeEe-eCCCCCC---CeEEECCCCCEEEEcC-----------CeEEEECC
Confidence 544322 235666665544444 1111 1110011 12333 2678888761 34889999
Q ss_pred CCCeEEEcc
Q 001895 371 AAGVWCDTK 379 (999)
Q Consensus 371 ~t~~W~~v~ 379 (999)
+......+.
T Consensus 245 ~g~~~~~~~ 253 (296)
T 3e5z_A 245 DGDELGRVL 253 (296)
T ss_dssp TSCEEEEEE
T ss_pred CCCEEEEEE
Confidence 855444443
No 188
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=69.57 E-value=1.8e+02 Score=34.12 Aligned_cols=93 Identities=13% Similarity=0.128 Sum_probs=52.0
Q ss_pred ccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecC--CCCCceEEEeecCC
Q 001895 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLT--QQRPRWHRVVVQGP 223 (999)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~--t~t~kW~~v~~~g~ 223 (999)
..+.+.++|+.+++-...-..+ ..-|.++.. +..+|+.+. .+.+++||+. +.+ .-.++.
T Consensus 175 ~~~~V~viD~~t~~v~~~i~~g-----~~p~~v~~SpDGr~lyv~~~-------dg~V~viD~~~~t~~-~v~~i~---- 237 (567)
T 1qks_A 175 DAGQIALIDGSTYEIKTVLDTG-----YAVHISRLSASGRYLFVIGR-------DGKVNMIDLWMKEPT-TVAEIK---- 237 (567)
T ss_dssp TTTEEEEEETTTCCEEEEEECS-----SCEEEEEECTTSCEEEEEET-------TSEEEEEETTSSSCC-EEEEEE----
T ss_pred CCCeEEEEECCCCeEEEEEeCC-----CCccceEECCCCCEEEEEcC-------CCeEEEEECCCCCCc-EeEEEe----
Confidence 3458999999998654332222 233444444 447777642 2479999995 432 112222
Q ss_pred CCCCCcccEEEEE-----CCcEEEEEccCCCCCCCCeEEEEECCCC
Q 001895 224 GPGPRYGHVMALV-----GQRYLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 224 ~P~~R~~h~~~v~-----~~~~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
.+..-..+++. +++++|+..-. -+.+.+||..+.
T Consensus 238 --~G~~P~~ia~s~~~~pDGk~l~v~n~~-----~~~v~ViD~~t~ 276 (567)
T 1qks_A 238 --IGSEARSIETSKMEGWEDKYAIAGAYW-----PPQYVIMDGETL 276 (567)
T ss_dssp --CCSEEEEEEECCSTTCTTTEEEEEEEE-----TTEEEEEETTTC
T ss_pred --cCCCCceeEEccccCCCCCEEEEEEcc-----CCeEEEEECCCC
Confidence 22222334444 45577776433 256788898776
No 189
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=69.39 E-value=2.7 Score=45.09 Aligned_cols=68 Identities=21% Similarity=0.242 Sum_probs=41.0
Q ss_pred cCCeEEEecCCCCHH--HHHHHHHHhCCC-CCCCCccceeEEEeccccCCC-CChHHHHHHHHHhhhcCCCCEEEecCCc
Q 001895 697 KAPIKIFGDLHGQFG--DLMRLFDEYGSP-STAGDIAYIDYLFLGDYVDRG-QHSLETITLLLALKVEYPNNVHLIRGNH 772 (999)
Q Consensus 697 ~~~i~vvGDiHG~~~--~L~~il~~~g~~-~~~~~~~~~~~vfLGDyVDRG-~~s~evl~ll~~lk~~~P~~v~llrGNH 772 (999)
+.+|..+|||||... .+...+..+... ..+ -+|+.||-.--| ..+..+..+|..+.. .+ +-.|||
T Consensus 4 ~m~ilf~GDv~G~~G~~~l~~~l~~lr~~~~~d------~vi~Ngen~~gG~g~~~~~~~~ln~~G~----Da-~TlGNH 72 (281)
T 1t71_A 4 SIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQAD------LVIVNAENTTHGKGLSLKHYEFLKEAGV----NY-ITMGNH 72 (281)
T ss_dssp CCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCS------EEEEECTBTTTTSSCCHHHHHHHHHHTC----CE-EECCTT
T ss_pred eEEEEEECCcCChHHHHHHHHHHHHHHHhcCCC------EEEEcCCCCCCCCCcCHHHHHHHHhcCC----CE-EEEccC
Confidence 467999999999852 233334333210 011 455666666444 456788888888754 33 445999
Q ss_pred ccc
Q 001895 773 EAA 775 (999)
Q Consensus 773 E~~ 775 (999)
|.-
T Consensus 73 efD 75 (281)
T 1t71_A 73 TWF 75 (281)
T ss_dssp TTC
T ss_pred ccc
Confidence 983
No 190
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=69.27 E-value=6.5 Score=43.04 Aligned_cols=160 Identities=15% Similarity=0.113 Sum_probs=65.0
Q ss_pred CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcc-cEEEEECCcEEEEEccCCCCCCCCeEEEEECC
Q 001895 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYG-HVMALVGQRYLMAIGGNDGKRPLADVWALDTA 262 (999)
Q Consensus 184 g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~-h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~ 262 (999)
++++++.|+..........+++|+..+......... .......+ .+++...++.++ .|+.++ .+..||+.
T Consensus 53 DG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~---~~~~~~~~V~~~~~s~d~~~l-~~s~dg-----~v~lWd~~ 123 (357)
T 4g56_B 53 DGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCT---AGVQTEAGVTDVAWVSEKGIL-VASDSG-----AVELWEIL 123 (357)
T ss_dssp SSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCS---EEEECSSCEEEEEEETTTEEE-EEETTS-----CEEEC---
T ss_pred CCCEEEEEcCCCCccccCeEEEEECCCCCcceeEec---ccCCCCCCEEEEEEcCCCCEE-EEECCC-----EEEEeecc
Confidence 557777777543333345688887765321111100 00001111 223344554554 455554 47777876
Q ss_pred CCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE
Q 001895 263 AKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV 342 (999)
Q Consensus 263 s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~ 342 (999)
+. +-..+...................++++++.|+.++. +..++..+. ....... + ....-.++++.
T Consensus 124 ~~--~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~------v~iwd~~~~-~~~~~~~-~---h~~~v~~v~~s 190 (357)
T 4g56_B 124 EK--ESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFS------VKVWDLSQK-AVLKSYN-A---HSSEVNCVAAC 190 (357)
T ss_dssp -------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSC------EEEEETTTT-EEEEEEC-C---CSSCEEEEEEC
T ss_pred cc--ceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCe------EEEEECCCC-cEEEEEc-C---CCCCEEEEEEc
Confidence 65 2111111000000011112223346777888876543 334444433 2221111 1 11112233333
Q ss_pred --CCEEEEEcCcCCCCCCcccCCeEEEEECCCCe
Q 001895 343 --NARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (999)
Q Consensus 343 --~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~ 374 (999)
++.+++.||.++ .|.+||+.+.+
T Consensus 191 ~~~~~~~~s~~~dg---------~v~~wd~~~~~ 215 (357)
T 4g56_B 191 PGKDTIFLSCGEDG---------RILLWDTRKPK 215 (357)
T ss_dssp TTCSSCEEEEETTS---------CEEECCTTSSS
T ss_pred cCCCceeeeeccCC---------ceEEEECCCCc
Confidence 235777777532 37788887764
No 191
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=69.03 E-value=96 Score=37.38 Aligned_cols=203 Identities=14% Similarity=0.063 Sum_probs=98.8
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCC--------CCCcCcEEEEecCCCCCceEEEeec
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPA--------GLSAEDLHVLDLTQQRPRWHRVVVQ 221 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~--------~~~~~dv~vyD~~t~t~kW~~v~~~ 221 (999)
..++++|+.++++...... .... .+.+...++-++++..... ......+|++++.+...+-..+. .
T Consensus 189 ~~i~v~dl~tg~~~~~~~~----~~~~-~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~-~ 262 (741)
T 1yr2_A 189 RTVKFVGVADGKPLADELK----WVKF-SGLAWLGNDALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVF-A 262 (741)
T ss_dssp EEEEEEETTTCCEEEEEEE----EEES-CCCEESTTSEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEE-C
T ss_pred EEEEEEECCCCCCCCccCC----Ccee-ccEEEECCCEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEe-c
Confidence 4799999999987654221 1111 1122222243444433221 11235689999876421112222 1
Q ss_pred CCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCce-EEEcccCCCCCCCccceEEEEEeCCEEEEEecc
Q 001895 222 GPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYE-WRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 300 (999)
Q Consensus 222 g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~-W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~ 300 (999)
....+........-.+++.+++...++....+++|.+|+.+..-. |..+..... .. ...+...++.||+....
T Consensus 263 -~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~----~~-~~~~~~dg~~l~~~s~~ 336 (741)
T 1yr2_A 263 -TPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK----AQ-WDFVDGVGDQLWFVSGD 336 (741)
T ss_dssp -CTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS----SC-EEEEEEETTEEEEEECT
T ss_pred -cCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC----ce-EEEEeccCCEEEEEECC
Confidence 111222233333334434444444333234679999999764223 666654322 11 12223456677776543
Q ss_pred CCCCCCcccEEEEecCCC-CeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEc
Q 001895 301 DASSVPLASAYGLAKHRD-GRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (999)
Q Consensus 301 ~~~~~~~~d~~~~~~~~~-~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v 378 (999)
+. ....++.++.... ..|.-.... .. ..-..+...+++|++....++ ...|+++|+....-..+
T Consensus 337 ~~---~~~~l~~~d~~~~~~~~~~l~~~--~~--~~l~~~~~~~~~lv~~~~~dg-------~~~l~~~~~~g~~~~~l 401 (741)
T 1yr2_A 337 GA---PLKKIVRVDLSGSTPRFDTVVPE--SK--DNLESVGIAGNRLFASYIHDA-------KSQVLAFDLDGKPAGAV 401 (741)
T ss_dssp TC---TTCEEEEEECSSSSCEEEEEECC--CS--SEEEEEEEEBTEEEEEEEETT-------EEEEEEEETTSCEEEEC
T ss_pred CC---CCCEEEEEeCCCCccccEEEecC--CC--CeEEEEEEECCEEEEEEEECC-------EEEEEEEeCCCCceeec
Confidence 22 2345777766542 355544322 11 112234455888888765433 34589999865544443
No 192
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=68.66 E-value=29 Score=37.45 Aligned_cols=112 Identities=15% Similarity=0.083 Sum_probs=56.3
Q ss_pred ccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCC
Q 001895 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (999)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~ 226 (999)
....++.+|+.+.+-+.+... ..+..+....- +++.+++............+|++|+.+.. ...+. ....
T Consensus 166 ~~~~l~~~d~~~g~~~~l~~~----~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~---~~~~ 236 (388)
T 3pe7_A 166 PCCRLMRVDLKTGESTVILQE----NQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN--MRKVK---THAE 236 (388)
T ss_dssp CCEEEEEEETTTCCEEEEEEE----SSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC--CEESC---CCCT
T ss_pred CcceEEEEECCCCceEEeecC----CccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc--eEEee---eCCC
Confidence 346899999999887776532 12223333333 34444444332222234689999987643 44443 1111
Q ss_pred CCcccEEEEE-CCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEc
Q 001895 227 PRYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKL 271 (999)
Q Consensus 227 ~R~~h~~~v~-~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v 271 (999)
.......+.- ++..|++....++ .....++++|+.+. +-+.+
T Consensus 237 ~~~~~~~~~spdg~~l~~~~~~~~-~~~~~l~~~d~~~g--~~~~l 279 (388)
T 3pe7_A 237 GESCTHEFWVPDGSALVYVSYLKG-SPDRFIYSADPETL--ENRQL 279 (388)
T ss_dssp TEEEEEEEECTTSSCEEEEEEETT-CCCEEEEEECTTTC--CEEEE
T ss_pred CcccccceECCCCCEEEEEecCCC-CCcceEEEEecCCC--ceEEE
Confidence 1111122222 3334544433222 22235999999888 54444
No 193
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=68.47 E-value=52 Score=38.33 Aligned_cols=131 Identities=15% Similarity=0.148 Sum_probs=64.4
Q ss_pred cCeEEEEECCCCcEEEecCC-CC-------CCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCce-EEE
Q 001895 149 TADVHCYDVLTNKWSRITPF-GE-------PPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRW-HRV 218 (999)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~-g~-------~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW-~~v 218 (999)
.+.+.++|..+.+-.+.-.. +. .|.+|..+.+..- +..+|+.... .+.++++|+.+..... ..+
T Consensus 247 ~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~------~g~i~vvd~~~~~~l~~~~i 320 (543)
T 1nir_A 247 PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE------TGKVLLVNYKDIDNLTVTSI 320 (543)
T ss_dssp SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT------TTEEEEEECTTSSSCEEEEE
T ss_pred CCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC------CCeEEEEEecCCCcceeEEe
Confidence 35677888887764333221 10 1223333222222 3455555432 3679999988743111 122
Q ss_pred eecCCCCCCCcccEEEEECCc-EEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEe-CCEEEE
Q 001895 219 VVQGPGPGPRYGHVMALVGQR-YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS-DGLLLL 296 (999)
Q Consensus 219 ~~~g~~P~~R~~h~~~v~~~~-~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~-~~~Lyv 296 (999)
+.++.-|.++.-.++ ++|+.+.. .+.+.++|+.+. +-...-..+..|.+.+.. ..... ++.+|+
T Consensus 321 ------~~~~~~~~~~~spdg~~l~va~~~-----~~~v~v~D~~tg--~l~~~i~~g~~ph~g~g~-~~~~p~~g~~~~ 386 (543)
T 1nir_A 321 ------GAAPFLHDGGWDSSHRYFMTAANN-----SNKVAVIDSKDR--RLSALVDVGKTPHPGRGA-NFVHPKYGPVWS 386 (543)
T ss_dssp ------ECCSSCCCEEECTTSCEEEEEEGG-----GTEEEEEETTTT--EEEEEEECSSSBCCTTCE-EEEETTTEEEEE
T ss_pred ------ccCcCccCceECCCCCEEEEEecC-----CCeEEEEECCCC--eEEEeeccCCCCCCCCCc-ccCCCCCccEEE
Confidence 224444555554433 45554432 247888999988 544433333333332222 22222 367777
Q ss_pred Eec
Q 001895 297 CGG 299 (999)
Q Consensus 297 fGG 299 (999)
.+.
T Consensus 387 s~~ 389 (543)
T 1nir_A 387 TSH 389 (543)
T ss_dssp EEB
T ss_pred ecc
Confidence 654
No 194
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=68.21 E-value=1.5e+02 Score=32.72 Aligned_cols=147 Identities=14% Similarity=0.114 Sum_probs=73.3
Q ss_pred CEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCC
Q 001895 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
+.+++.|+.+ ..+.+||+.+.. -...- .+ ....-.+++...++..++.|+.++ .+..||+.+.
T Consensus 280 ~~~l~~~~~d------~~i~vwd~~~~~--~~~~~-~~---~~~~v~~~~~~~~~~~l~sg~~dg-----~i~vwd~~~~ 342 (464)
T 3v7d_B 280 GNIVVSGSYD------NTLIVWDVAQMK--CLYIL-SG---HTDRIYSTIYDHERKRCISASMDT-----TIRIWDLENG 342 (464)
T ss_dssp TTEEEEEETT------SCEEEEETTTTE--EEEEE-CC---CSSCEEEEEEETTTTEEEEEETTS-----CEEEEETTTT
T ss_pred CCEEEEEeCC------CeEEEEECCCCc--EEEEe-cC---CCCCEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCC
Confidence 3455555532 479999998742 21111 11 111122333444445677777765 5888999876
Q ss_pred CceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECC
Q 001895 265 PYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNA 344 (999)
Q Consensus 265 ~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~ 344 (999)
+-...-... .....++.. ++..++.|+.++. +..++..+. .-.+.... .......+...++
T Consensus 343 --~~~~~~~~h-----~~~v~~~~~-~~~~l~s~s~dg~------v~vwd~~~~-~~~~~~~~----~~~~~~~~~~~~~ 403 (464)
T 3v7d_B 343 --ELMYTLQGH-----TALVGLLRL-SDKFLVSAAADGS------IRGWDANDY-SRKFSYHH----TNLSAITTFYVSD 403 (464)
T ss_dssp --EEEEEECCC-----SSCEEEEEE-CSSEEEEEETTSE------EEEEETTTC-CEEEEEEC----TTCCCEEEEEECS
T ss_pred --cEEEEEeCC-----CCcEEEEEE-cCCEEEEEeCCCc------EEEEECCCC-ceeeeecC----CCCccEEEEEeCC
Confidence 322211111 111222333 4566677775542 334444332 21222211 1122233444577
Q ss_pred EEEEEcCcCCCCCCcccCCeEEEEECCCCeEEE
Q 001895 345 RLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (999)
Q Consensus 345 ~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~ 377 (999)
.+++.|+ + +.+.+||+++++-..
T Consensus 404 ~~l~~~~-d---------g~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 404 NILVSGS-E---------NQFNIYNLRSGKLVH 426 (464)
T ss_dssp SEEEEEE-T---------TEEEEEETTTCCEEE
T ss_pred CEEEEec-C---------CeEEEEECCCCcEEe
Confidence 7777776 2 348999999987554
No 195
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=67.39 E-value=2.1e+02 Score=34.14 Aligned_cols=120 Identities=19% Similarity=0.178 Sum_probs=67.8
Q ss_pred CeEEEEECCCCc--EEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCC
Q 001895 150 ADVHCYDVLTNK--WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (999)
Q Consensus 150 ~dv~~yD~~t~~--W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~ 227 (999)
..++.+|..|++ |+.-.... ...-....+.++.++.+|+..+. ........++.||..+....|+.-...+ .|..
T Consensus 127 g~l~alD~~tG~~~W~~~~~~~-~~~~~~~~~P~v~~~~v~vg~~~-~~~~~~g~v~a~D~~tG~~~W~~~~~~~-~p~~ 203 (668)
T 1kv9_A 127 GRLIALDAKTGKAIWSQQTTDP-AKPYSITGAPRVVKGKVIIGNGG-AEYGVRGFVSAYDADTGKLAWRFYTVPG-DPAL 203 (668)
T ss_dssp SEEEEEETTTCCEEEEEECSCT-TSSCBCCSCCEEETTEEEECCBC-TTTCCBCEEEEEETTTCCEEEEEESSCC-CTTS
T ss_pred CEEEEEECCCCCEeeeeccCCC-CCcceecCCCEEECCEEEEeCCC-CCcCCCCEEEEEECCCCcEEEEecccCC-CCCc
Confidence 479999998875 88754321 01112223445668887774332 1112346799999998777798753211 1111
Q ss_pred C--------------------------cccEEEEE-CCcEEEEEccCC-------------CCCCCCeEEEEECCCCCce
Q 001895 228 R--------------------------YGHVMALV-GQRYLMAIGGND-------------GKRPLADVWALDTAAKPYE 267 (999)
Q Consensus 228 R--------------------------~~h~~~v~-~~~~Lyv~GG~~-------------g~~~~ndv~~yDl~s~~~~ 267 (999)
. .-.++++- ..+.+|+-.|.. ++.+...++.+|+.+....
T Consensus 204 ~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~ 283 (668)
T 1kv9_A 204 PYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLA 283 (668)
T ss_dssp CCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEE
T ss_pred cccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCcee
Confidence 0 00122332 233666654431 1234567999999998889
Q ss_pred EEEcc
Q 001895 268 WRKLE 272 (999)
Q Consensus 268 W~~v~ 272 (999)
|+.-.
T Consensus 284 W~~~~ 288 (668)
T 1kv9_A 284 WHYQV 288 (668)
T ss_dssp EEEES
T ss_pred eEeec
Confidence 98754
No 196
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=66.85 E-value=46 Score=36.08 Aligned_cols=67 Identities=10% Similarity=0.036 Sum_probs=35.2
Q ss_pred CEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCC-----CCcccEEEEECC-cEEEEEccCCCCCCCCeEEE
Q 001895 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG-----PRYGHVMALVGQ-RYLMAIGGNDGKRPLADVWA 258 (999)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~-----~R~~h~~~v~~~-~~Lyv~GG~~g~~~~ndv~~ 258 (999)
+.+++.|+.+ ..+.+||+.+.. ....- ..+. ...-.+++...+ ..+++.|+.++.. ..+..
T Consensus 178 ~~~l~~~~~d------g~v~iwd~~~~~--~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~--~~i~~ 244 (416)
T 2pm9_A 178 AHVFASAGSS------NFASIWDLKAKK--EVIHL---SYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDND--PSILI 244 (416)
T ss_dssp TTEEEEESSS------SCEEEEETTTTE--EEEEE---CCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSS--CCCCE
T ss_pred CcEEEEEcCC------CCEEEEECCCCC--cceEE---eccccccccCCceEEEEECCCCCCEEEEEECCCCC--ceEEE
Confidence 4677777642 569999998752 22221 1111 122223333333 2477777766421 25677
Q ss_pred EECCCC
Q 001895 259 LDTAAK 264 (999)
Q Consensus 259 yDl~s~ 264 (999)
||+.+.
T Consensus 245 ~d~~~~ 250 (416)
T 2pm9_A 245 WDLRNA 250 (416)
T ss_dssp EETTST
T ss_pred EeCCCC
Confidence 888764
No 197
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=66.63 E-value=1.5e+02 Score=32.12 Aligned_cols=156 Identities=13% Similarity=0.059 Sum_probs=74.9
Q ss_pred CCEEEEEcccCCCCCCcCcEEEEecCCCCCce------EEEeecCCCCCCCcccEEEEECCc-EEEEEccCCCCCCCCeE
Q 001895 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRW------HRVVVQGPGPGPRYGHVMALVGQR-YLMAIGGNDGKRPLADV 256 (999)
Q Consensus 184 g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW------~~v~~~g~~P~~R~~h~~~v~~~~-~Lyv~GG~~g~~~~ndv 256 (999)
++.+++.|+.+ ..+.+||+.+..... ..+. .....-.+++...++ .+++.|+.++ .+
T Consensus 93 ~~~~l~s~s~d------g~v~vw~~~~~~~~~~~~~~~~~~~-----~h~~~v~~~~~~p~~~~~l~s~~~dg-----~i 156 (402)
T 2aq5_A 93 NDNVIASGSED------CTVMVWEIPDGGLVLPLREPVITLE-----GHTKRVGIVAWHPTAQNVLLSAGCDN-----VI 156 (402)
T ss_dssp CTTEEEEEETT------SEEEEEECCTTCCSSCBCSCSEEEE-----CCSSCEEEEEECSSBTTEEEEEETTS-----CE
T ss_pred CCCEEEEEeCC------CeEEEEEccCCCCccccCCceEEec-----CCCCeEEEEEECcCCCCEEEEEcCCC-----EE
Confidence 45677777642 468899988752111 1111 011112223333332 4777777765 58
Q ss_pred EEEECCCCCceEEEccc-CCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcc
Q 001895 257 WALDTAAKPYEWRKLEP-EGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRY 335 (999)
Q Consensus 257 ~~yDl~s~~~~W~~v~~-~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~ 335 (999)
..||+.+. +....-. ... ...........++.+++.|+.++ .+..++..+. .-......+. ...+.
T Consensus 157 ~iwd~~~~--~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d~------~i~iwd~~~~-~~~~~~~~~~-~~~~~ 223 (402)
T 2aq5_A 157 LVWDVGTG--AAVLTLGPDVH---PDTIYSVDWSRDGALICTSCRDK------RVRVIEPRKG-TVVAEKDRPH-EGTRP 223 (402)
T ss_dssp EEEETTTT--EEEEEECTTTC---CSCEEEEEECTTSSCEEEEETTS------EEEEEETTTT-EEEEEEECSS-CSSSC
T ss_pred EEEECCCC--CccEEEecCCC---CCceEEEEECCCCCEEEEEecCC------cEEEEeCCCC-ceeeeeccCC-CCCcc
Confidence 89999887 5433221 111 01112222233677777777543 3445554433 2222221111 11112
Q ss_pred eeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCe
Q 001895 336 QHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (999)
Q Consensus 336 ~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~ 374 (999)
...+..-++++++.|..... ...|.+||+.+..
T Consensus 224 ~~~~~~~~~~~l~~g~~~~~------d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 224 VHAVFVSEGKILTTGFSRMS------ERQVALWDTKHLE 256 (402)
T ss_dssp CEEEECSTTEEEEEEECTTC------CEEEEEEETTBCS
T ss_pred eEEEEcCCCcEEEEeccCCC------CceEEEEcCcccc
Confidence 22222236787777731111 3468999988753
No 198
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=66.45 E-value=1.2e+02 Score=36.26 Aligned_cols=200 Identities=13% Similarity=0.054 Sum_probs=98.5
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCC-------CCcCcEEEEecCCCCCceEEEeec
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAG-------LSAEDLHVLDLTQQRPRWHRVVVQ 221 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~-------~~~~dv~vyD~~t~t~kW~~v~~~ 221 (999)
.+++++|+.+++...... .+.... .+.+.. +++.++++...... ....++|++++.+...+-..+.
T Consensus 147 ~~i~v~dl~tg~~~~~~~---~~~~~~-~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~-- 220 (695)
T 2bkl_A 147 AVLHVIDVDSGEWSKVDV---IEGGKY-ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVH-- 220 (695)
T ss_dssp CEEEEEETTTCCBCSSCC---BSCCTT-CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEE--
T ss_pred EEEEEEECCCCCCcCCcc---cCcccc-cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEE--
Confidence 489999999987531111 111111 222222 45555555442211 1235699999987531122332
Q ss_pred CCCCC-CCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEecc
Q 001895 222 GPGPG-PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 300 (999)
Q Consensus 222 g~~P~-~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~ 300 (999)
..+. +....+...-.+++.++++..++. ..+++|.+|..+. .|..+..... .....+..++.+|+....
T Consensus 221 -~~~~~~~~~~~~~~SpDG~~l~~~~~~~~-~~~~l~~~~~~~~--~~~~l~~~~~------~~~~~~~~~g~l~~~s~~ 290 (695)
T 2bkl_A 221 -ERTGDPTTFLQSDLSRDGKYLFVYILRGW-SENDVYWKRPGEK--DFRLLVKGVG------AKYEVHAWKDRFYVLTDE 290 (695)
T ss_dssp -CCCCCTTCEEEEEECTTSCCEEEEEEETT-TEEEEEEECTTCS--SCEEEEECSS------CCEEEEEETTEEEEEECT
T ss_pred -ecCCCCEEEEEEEECCCCCEEEEEEeCCC-CceEEEEEcCCCC--ceEEeecCCC------ceEEEEecCCcEEEEECC
Confidence 1222 222333333333344444443321 3568898888766 6777754322 112222246665555433
Q ss_pred CCCCCCcccEEEEecCCCC--eEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEc
Q 001895 301 DASSVPLASAYGLAKHRDG--RWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (999)
Q Consensus 301 ~~~~~~~~d~~~~~~~~~~--~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v 378 (999)
+. ....++.++..+.. .|+...... + ...-..+.+.+++|++....++ ...++++|+....-..+
T Consensus 291 ~~---~~~~l~~~d~~~~~~~~~~~l~~~~--~-~~~l~~~~~~~~~lv~~~~~dg-------~~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 291 GA---PRQRVFEVDPAKPARASWKEIVPED--S-SASLLSVSIVGGHLSLEYLKDA-------TSEVRVATLKGKPVRTV 357 (695)
T ss_dssp TC---TTCEEEEEBTTBCSGGGCEEEECCC--S-SCEEEEEEEETTEEEEEEEETT-------EEEEEEEETTCCEEEEC
T ss_pred CC---CCCEEEEEeCCCCCccCCeEEecCC--C-CCeEEEEEEECCEEEEEEEECC-------EEEEEEEeCCCCeeEEe
Confidence 21 23456667654332 255443321 1 1222334555888888876543 34589999865544443
No 199
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=65.88 E-value=1.4e+02 Score=31.41 Aligned_cols=191 Identities=13% Similarity=0.096 Sum_probs=90.7
Q ss_pred ccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CC-EEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCC
Q 001895 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GT-MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (999)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~-~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P 225 (999)
....+|.+|+.+.+-..+. . ....+.. ++ .|++.....+ .....+|++|+.+. +...+... +
T Consensus 41 ~~~~l~~~d~~~~~~~~l~--------~-~~~~~~SpDg~~la~~~~~~~--~~~~~l~~~~~~~g--~~~~l~~~---~ 104 (347)
T 2gop_A 41 YENTIVIENLKNNARRFIE--------N-ATMPRISPDGKKIAFMRANEE--KKVSEIWVADLETL--SSKKILEA---K 104 (347)
T ss_dssp EEEEEEEEETTTCCEEEEE--------S-CEEEEECTTSSEEEEEEEETT--TTEEEEEEEETTTT--EEEEEEEE---S
T ss_pred ccceEEEEeCCCCceEEcc--------c-CCCeEECCCCCEEEEEEeccC--CCcceEEEEECCCC--ceEEEEcC---C
Confidence 4568999999988766661 1 1122222 33 4444332211 12346999998874 35555422 1
Q ss_pred CCCcccEEEEE-CCcEEEEEccC-----------------CCCC----CCCeEEEEECCCCCceE-EEcccCCCCCCCcc
Q 001895 226 GPRYGHVMALV-GQRYLMAIGGN-----------------DGKR----PLADVWALDTAAKPYEW-RKLEPEGEGPPPCM 282 (999)
Q Consensus 226 ~~R~~h~~~v~-~~~~Lyv~GG~-----------------~g~~----~~ndv~~yDl~s~~~~W-~~v~~~~~~P~~r~ 282 (999)
. -.....- ++..|++.... ++.. ....++++|+.+. +. ..+.. . .
T Consensus 105 ~---~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~--~~~~~l~~-~------~ 172 (347)
T 2gop_A 105 N---IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE--EVIEEFEK-P------R 172 (347)
T ss_dssp E---EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTT--EEEEEEEE-E------T
T ss_pred C---ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCC--eEEeeecC-C------C
Confidence 1 2222222 33344444321 1111 1367999999887 65 44433 1 1
Q ss_pred ceEEEEEeCCEEEEEeccCCCCC--C-cccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCc
Q 001895 283 YATASARSDGLLLLCGGRDASSV--P-LASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMV 359 (999)
Q Consensus 283 ~~~a~~~~~~~LyvfGG~~~~~~--~-~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~ 359 (999)
........++ +++.+..+.... . ...+|.++ .+.+...... .......-+++.+++++...... .
T Consensus 173 ~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d---~~~~~~l~~~-------~~~~~~spdg~~l~~~~~~~~~~-~ 240 (347)
T 2gop_A 173 FSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE---DGKEEKMFEK-------VSFYAVDSDGERILLYGKPEKKY-M 240 (347)
T ss_dssp TCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE---TTEEEEEEEE-------ESEEEEEECSSCEEEEECCSSSC-C
T ss_pred cccccCCCCe-EEEEEecccccccccccccEEEeC---CCceEEeccC-------cceeeECCCCCEEEEEEccccCC-c
Confidence 1222334456 555554432211 1 45677777 3444433221 11122233555444444322110 1
Q ss_pred ccCCeEEEEECCCCeEEEccc
Q 001895 360 EDSSSVAVLDTAAGVWCDTKS 380 (999)
Q Consensus 360 ~~~~~v~vyD~~t~~W~~v~~ 380 (999)
.....|+++| ++++..+..
T Consensus 241 ~~~~~l~~~d--~~~~~~l~~ 259 (347)
T 2gop_A 241 SEHNKLYIYD--GKEVMGILD 259 (347)
T ss_dssp CSSCEEEEEC--SSCEEESST
T ss_pred cccceEEEEC--CCceEeccc
Confidence 1246799999 677766543
No 200
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=65.62 E-value=2.9 Score=49.49 Aligned_cols=71 Identities=18% Similarity=0.207 Sum_probs=38.8
Q ss_pred CCeEEEecCCCCHH-------------HHHHHHHHhCCCC-CCCCccceeEEEeccccCCCCC-------hHHHHHHHHH
Q 001895 698 APIKIFGDLHGQFG-------------DLMRLFDEYGSPS-TAGDIAYIDYLFLGDYVDRGQH-------SLETITLLLA 756 (999)
Q Consensus 698 ~~i~vvGDiHG~~~-------------~L~~il~~~g~~~-~~~~~~~~~~vfLGDyVDRG~~-------s~evl~ll~~ 756 (999)
..|+.++|+||.+. .+.++...+.-.. ..+ ...-+|..||+++..+. ...++.+|-.
T Consensus 16 l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~--~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~ln~ 93 (557)
T 3c9f_A 16 INFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRN--QDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFIK 93 (557)
T ss_dssp EEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTT--CEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHTT
T ss_pred EEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcC--CCEEEEecCCCCCCccchhhcccCCHHHHHHHHh
Confidence 45888999999753 3444433221100 000 11146779999976432 2234555555
Q ss_pred hhhcCCCCEEEecCCcccc
Q 001895 757 LKVEYPNNVHLIRGNHEAA 775 (999)
Q Consensus 757 lk~~~P~~v~llrGNHE~~ 775 (999)
+.. -.+..||||.-
T Consensus 94 lg~-----Da~tlGNHEfD 107 (557)
T 3c9f_A 94 QDY-----DLLTIGNHELY 107 (557)
T ss_dssp SCC-----SEECCCGGGSS
T ss_pred cCC-----CEEeecchhcc
Confidence 432 24567999984
No 201
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=65.59 E-value=2.3e+02 Score=34.01 Aligned_cols=194 Identities=10% Similarity=0.031 Sum_probs=93.9
Q ss_pred cccCeEEEEECCCCcEEEecCCCCCC--CCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCC----CCceE---
Q 001895 147 GATADVHCYDVLTNKWSRITPFGEPP--TPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQ----RPRWH--- 216 (999)
Q Consensus 147 g~~~dv~~yD~~t~~W~~l~~~g~~P--~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~----t~kW~--- 216 (999)
|...-+++||+.+++++......... ....-++.+.. ++.|+|. ..+ .-+++||..+. ...+.
T Consensus 389 gt~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWig-T~~------~Gl~~~~~~~~~~~~~~~~~~~~ 461 (758)
T 3ott_A 389 ATDGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWIS-TCL------GGIFVVDKHKLMQSTSGQYIAEQ 461 (758)
T ss_dssp EETTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEE-ESS------SCEEEEEHHHHHHCCSSEEECSE
T ss_pred EeCCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEE-ECC------CceEEEccccccccCCcceeccc
Confidence 44457889999999888764211101 11111223332 3477763 221 24788886531 00121
Q ss_pred EEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEE
Q 001895 217 RVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLL 296 (999)
Q Consensus 217 ~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~Lyv 296 (999)
.......++.. .-.+++.-.++.||++||..+ -+++||+.+. +++.+..... .........+.-.++.||+
T Consensus 462 ~~~~~~~l~~~-~i~~i~~d~~g~lWi~~~t~~-----Gl~~~d~~~~--~~~~~~~~~~-~~~~~~~~i~~d~~g~lWi 532 (758)
T 3ott_A 462 NYSVHNGLSGM-FINQIIPDNEGNVWVLLYNNK-----GIDKINPRTR--EVTKLFADEL-TGEKSPNYLLCDEDGLLWV 532 (758)
T ss_dssp EECGGGTCSCS-CEEEEEECTTSCEEEEETTCS-----SEEEEETTTT--EEEEECTTTS-CGGGCEEEEEECTTSCEEE
T ss_pred ccccccccccc-eeeeEEEcCCCCEEEEccCCC-----CcEEEeCCCC--ceEEecCCCc-CCCcccceEEECCCCCEEE
Confidence 11111122221 122333334457998766542 4899999988 8887643211 1001111222223578887
Q ss_pred EeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEE
Q 001895 297 CGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (999)
Q Consensus 297 fGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~ 376 (999)
.. . .-+..|++.+. .+......+. |. ..-.+++.-++.|++... +.+.+||+++.+..
T Consensus 533 gt-~-------~Gl~~~~~~~~-~~~~~~~~gl-~~-~~i~~i~~~~g~lWi~t~-----------~Gl~~~~~~~~~~~ 590 (758)
T 3ott_A 533 GF-H-------GGVMRINPKDE-SQQSISFGSF-SN-NEILSMTCVKNSIWVSTT-----------NGLWIIDRKTMDAR 590 (758)
T ss_dssp EE-T-------TEEEEECC--C-CCCBCCCCC-----CCEEEEEEETTEEEEEES-----------SCEEEEETTTCCEE
T ss_pred Ee-c-------CceEEEecCCC-ceEEecccCC-Cc-cceEEEEECCCCEEEECC-----------CCeEEEcCCCceeE
Confidence 43 2 12556665443 2221111122 21 223344445788888642 33889999998876
Q ss_pred Ec
Q 001895 377 DT 378 (999)
Q Consensus 377 ~v 378 (999)
..
T Consensus 591 ~~ 592 (758)
T 3ott_A 591 QQ 592 (758)
T ss_dssp EC
T ss_pred Ee
Confidence 54
No 202
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=65.48 E-value=1.3e+02 Score=31.24 Aligned_cols=67 Identities=9% Similarity=0.103 Sum_probs=34.8
Q ss_pred CEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECC---cEEEEEccCCCCCCCCeEEEEEC
Q 001895 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQ---RYLMAIGGNDGKRPLADVWALDT 261 (999)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~---~~Lyv~GG~~g~~~~ndv~~yDl 261 (999)
..+++.|+... ....+.+||+.+.. .......+ ....-.+++...+ +.+++.|+.++ .+..||+
T Consensus 31 ~~l~~~~s~~~---~d~~v~iw~~~~~~--~~~~~~~~---~~~~v~~~~~~~~~~~~~~l~~~~~dg-----~i~iwd~ 97 (357)
T 3i2n_A 31 AKFVTMGNFAR---GTGVIQLYEIQHGD--LKLLREIE---KAKPIKCGTFGATSLQQRYLATGDFGG-----NLHIWNL 97 (357)
T ss_dssp SEEEEEEC--C---CCEEEEEEEECSSS--EEEEEEEE---ESSCEEEEECTTCCTTTCCEEEEETTS-----CEEEECT
T ss_pred ceEEEecCccC---CCcEEEEEeCCCCc--ccceeeec---ccCcEEEEEEcCCCCCCceEEEecCCC-----eEEEEeC
Confidence 36777776411 13578999998753 43332111 1111122222222 25777777665 5788888
Q ss_pred CCC
Q 001895 262 AAK 264 (999)
Q Consensus 262 ~s~ 264 (999)
.+.
T Consensus 98 ~~~ 100 (357)
T 3i2n_A 98 EAP 100 (357)
T ss_dssp TSC
T ss_pred CCC
Confidence 766
No 203
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=65.23 E-value=45 Score=35.78 Aligned_cols=96 Identities=14% Similarity=0.111 Sum_probs=40.6
Q ss_pred eEEEEECCCCc-EEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCC
Q 001895 151 DVHCYDVLTNK-WSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (999)
Q Consensus 151 dv~~yD~~t~~-W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~ 227 (999)
.+.+||+.+.. |....... .....-..+.+ ++.+++.|+.+ ..+.+||+.+.. .|...... ..+..
T Consensus 78 ~v~vwd~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~-~~~~~~~~-~~~h~ 146 (377)
T 3dwl_C 78 NAYVYEKRPDGTWKQTLVLL---RLNRAATFVRWSPNEDKFAVGSGA------RVISVCYFEQEN-DWWVSKHL-KRPLR 146 (377)
T ss_dssp SEEEC------CCCCEEECC---CCSSCEEEEECCTTSSCCEEEESS------SCEEECCC------CCCCEEE-CSSCC
T ss_pred eEEEEEcCCCCceeeeeEec---ccCCceEEEEECCCCCEEEEEecC------CeEEEEEECCcc-cceeeeEe-ecccC
Confidence 67788887765 44332221 11111122222 34566666642 468899988753 23222211 11112
Q ss_pred CcccEEEEECCcEEEEEccCCCCCCCCeEEEEECC
Q 001895 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTA 262 (999)
Q Consensus 228 R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~ 262 (999)
..-.+++...++.+++.|+.++ .+..||+.
T Consensus 147 ~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~ 176 (377)
T 3dwl_C 147 STILSLDWHPNNVLLAAGCADR-----KAYVLSAY 176 (377)
T ss_dssp SCEEEEEECTTSSEEEEEESSS-----CEEEEEEC
T ss_pred CCeEEEEEcCCCCEEEEEeCCC-----EEEEEEEE
Confidence 2223344444446777887765 46777774
No 204
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=65.19 E-value=1.5e+02 Score=31.70 Aligned_cols=104 Identities=17% Similarity=0.120 Sum_probs=52.0
Q ss_pred EEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEE-EeCCEEEEEeccCCCCCCcccEEEEecCCC
Q 001895 240 YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASA-RSDGLLLLCGGRDASSVPLASAYGLAKHRD 318 (999)
Q Consensus 240 ~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~-~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~ 318 (999)
.+++.|+.++ .+..||+.+. +....-.... ..-.++. ..++.+++.|+.++. +..++....
T Consensus 211 ~~l~sgs~Dg-----~v~~wd~~~~--~~~~~~~~h~-----~~v~~v~~~p~~~~l~s~s~D~~------v~lwd~~~~ 272 (354)
T 2pbi_B 211 NTFVSGGCDK-----KAMVWDMRSG--QCVQAFETHE-----SDVNSVRYYPSGDAFASGSDDAT------CRLYDLRAD 272 (354)
T ss_dssp CEEEEEETTS-----CEEEEETTTC--CEEEEECCCS-----SCEEEEEECTTSSEEEEEETTSC------EEEEETTTT
T ss_pred CEEEEEeCCC-----eEEEEECCCC--cEEEEecCCC-----CCeEEEEEeCCCCEEEEEeCCCe------EEEEECCCC
Confidence 5777888776 5888999877 4333211111 1122222 235677788876543 333443333
Q ss_pred CeEEEEECCCCCCCCccee-EEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCe
Q 001895 319 GRWEWAIAPGVSPSPRYQH-AAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (999)
Q Consensus 319 ~~W~w~~~~g~~P~~R~~h-sav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~ 374 (999)
........ ....... ++++. ++.+++.|+.+ ..|.+||+.+.+
T Consensus 273 ---~~~~~~~~-~~~~~~~~~~~~s~~g~~l~~g~~d---------~~i~vwd~~~~~ 317 (354)
T 2pbi_B 273 ---REVAIYSK-ESIIFGASSVDFSLSGRLLFAGYND---------YTINVWDVLKGS 317 (354)
T ss_dssp ---EEEEEECC-TTCCSCEEEEEECTTSSEEEEEETT---------SCEEEEETTTCS
T ss_pred ---cEEEEEcC-CCcccceeEEEEeCCCCEEEEEECC---------CcEEEEECCCCc
Confidence 11111111 1111122 22232 56777777643 348889987764
No 205
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=65.08 E-value=1.4e+02 Score=31.73 Aligned_cols=100 Identities=8% Similarity=0.040 Sum_probs=48.4
Q ss_pred cCeEEEEECCCCcEEEecCCCCCCCCCcCc-EEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecC---
Q 001895 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAH-VATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG--- 222 (999)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~h-sa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g--- 222 (999)
...+..||+.+.+-...-.. ....- +++.. +..+++.|+.+ ..+.+||+.+.......+....
T Consensus 165 ~~~v~~~d~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~ll~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~ 233 (408)
T 4a11_B 165 GPKVQLCDLKSGSCSHILQG-----HRQEILAVSWSPRYDYILATASAD------SRVKLWDVRRASGCLITLDQHNGKK 233 (408)
T ss_dssp SSSEEEEESSSSCCCEEECC-----CCSCEEEEEECSSCTTEEEEEETT------SCEEEEETTCSSCCSEECCTTTTCS
T ss_pred CCeEEEEeCCCcceeeeecC-----CCCcEEEEEECCCCCcEEEEEcCC------CcEEEEECCCCCccccccccccccc
Confidence 34788899876542221110 11111 22222 22467777643 4688999876432223221100
Q ss_pred --CC----CCCCc-ccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCC
Q 001895 223 --PG----PGPRY-GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 223 --~~----P~~R~-~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
.. ..... -.+++...++..++.|+.++ .+..||+.+.
T Consensus 234 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~vwd~~~~ 277 (408)
T 4a11_B 234 SQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDN-----RMRLWNSSNG 277 (408)
T ss_dssp CCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTC
T ss_pred ceeeccccccccCceeEEEEcCCCCEEEEecCCC-----eEEEEECCCC
Confidence 00 11111 12233333445677777665 5888998776
No 206
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=64.85 E-value=2.4e+02 Score=33.83 Aligned_cols=121 Identities=21% Similarity=0.236 Sum_probs=67.7
Q ss_pred CeEEEEECCCCc--EEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCC
Q 001895 150 ADVHCYDVLTNK--WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (999)
Q Consensus 150 ~dv~~yD~~t~~--W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~ 227 (999)
..++.+|..|++ |+.-........-....+.++.++.+|+..+.. .......++.||..+....|+.-...+. |..
T Consensus 131 g~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~-~~~~~g~v~a~D~~tG~~~W~~~~~~~~-p~~ 208 (689)
T 1yiq_A 131 GRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGA-EFGVRGYVTAYDAETGKEAWRFYTVPGD-PKL 208 (689)
T ss_dssp SEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCT-TTCCBCEEEEEETTTCCEEEEEESSCCC-TTS
T ss_pred CEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCC-ccCCCCEEEEEECCCCcEEEEecccCCC-ccc
Confidence 478999998875 887643110011122234456688887743321 1123467999999987767986532111 110
Q ss_pred C-----------------c----c-----cEEEEE-CCcEEEEEccC-------------CCCCCCCeEEEEECCCCCce
Q 001895 228 R-----------------Y----G-----HVMALV-GQRYLMAIGGN-------------DGKRPLADVWALDTAAKPYE 267 (999)
Q Consensus 228 R-----------------~----~-----h~~~v~-~~~~Lyv~GG~-------------~g~~~~ndv~~yDl~s~~~~ 267 (999)
. + + .++++- ..+.+|+-.|. .++.+...++.+|+.+....
T Consensus 209 ~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~ 288 (689)
T 1yiq_A 209 PPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYV 288 (689)
T ss_dssp CCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEE
T ss_pred ccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCcee
Confidence 0 0 0 123332 23466665443 12334567999999998889
Q ss_pred EEEcc
Q 001895 268 WRKLE 272 (999)
Q Consensus 268 W~~v~ 272 (999)
|+.-.
T Consensus 289 W~~~~ 293 (689)
T 1yiq_A 289 WHYQT 293 (689)
T ss_dssp EEEES
T ss_pred Eeeec
Confidence 98643
No 207
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=64.79 E-value=2.7e+02 Score=35.45 Aligned_cols=123 Identities=11% Similarity=0.021 Sum_probs=59.7
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
.+.+||..+.+-...-.. ....-.++.+ ++..++.|+. ...+.+||+.+.. ....- ....
T Consensus 638 ~i~vw~~~~~~~~~~~~~-----h~~~v~~~~~s~~~~~l~s~~~------d~~v~vwd~~~~~--~~~~~-----~~~~ 699 (1249)
T 3sfz_A 638 TLQVFKAETGEKLLDIKA-----HEDEVLCCAFSSDDSYIATCSA------DKKVKIWDSATGK--LVHTY-----DEHS 699 (1249)
T ss_dssp CEEEEETTTCCEEEEECC-----CSSCEEEEEECTTSSEEEEEET------TSEEEEEETTTCC--EEEEE-----ECCS
T ss_pred eEEEEECCCCCEEEEecc-----CCCCEEEEEEecCCCEEEEEeC------CCeEEEEECCCCc--eEEEE-----cCCC
Confidence 688899988764332111 1111222223 4456666663 2469999998753 22211 1111
Q ss_pred cccEEEEE-C--CcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCC
Q 001895 229 YGHVMALV-G--QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (999)
Q Consensus 229 ~~h~~~v~-~--~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~ 302 (999)
..-..+.+ . +..+++.|+.++ .+..||+.+.....+.... . ......+...++.+++.|+.++
T Consensus 700 ~~v~~~~~~~~~~~~~l~sg~~d~-----~v~vwd~~~~~~~~~~~~h--~----~~v~~~~~sp~~~~l~s~s~dg 765 (1249)
T 3sfz_A 700 EQVNCCHFTNKSNHLLLATGSNDF-----FLKLWDLNQKECRNTMFGH--T----NSVNHCRFSPDDELLASCSADG 765 (1249)
T ss_dssp SCEEEEEECSSSSCCEEEEEETTS-----CEEEEETTSSSEEEEECCC--S----SCEEEEEECSSTTEEEEEESSS
T ss_pred CcEEEEEEecCCCceEEEEEeCCC-----eEEEEECCCcchhheecCC--C----CCEEEEEEecCCCEEEEEECCC
Confidence 11222222 2 334666676665 5888999877322222111 1 1112222334666777777654
No 208
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=64.61 E-value=1.2e+02 Score=30.50 Aligned_cols=157 Identities=13% Similarity=0.040 Sum_probs=82.6
Q ss_pred cEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeec---CCCCCCCcccEEEEEC-CcEEEEEccCCCCCCC
Q 001895 178 HVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ---GPGPGPRYGHVMALVG-QRYLMAIGGNDGKRPL 253 (999)
Q Consensus 178 hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~---g~~P~~R~~h~~~v~~-~~~Lyv~GG~~g~~~~ 253 (999)
=|++...+.+|+|=| +-+|+++..... +....+. ..+|. .... +.... ++++|+|-|
T Consensus 27 DAi~~~~g~~y~Fkg--------~~~wr~~~~~~~--~~p~~I~~~wp~Lp~-~iDA-a~~~~~~~~iyfFkG------- 87 (207)
T 1pex_A 27 DAITSLRGETMIFKD--------RFFWRLHPQQVD--AELFLTKSFWPELPN-RIDA-AYEHPSHDLIFIFRG------- 87 (207)
T ss_dssp SEEEEETTEEEEEET--------TEEEEECSSSSC--CEEEEHHHHCTTSCS-SCCE-EEEETTTTEEEEEET-------
T ss_pred eEEEeCCCcEEEEEC--------CEEEEEeCCCcC--CCceehhHhccCCCC-CccE-EEEeccCCcEEEEcc-------
Confidence 345557889999976 357777654422 3222211 13442 2232 22332 348999977
Q ss_pred CeEEEEECCCCCceE-EEcccCCCCCCCccceEEEEEe-CCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCC--
Q 001895 254 ADVWALDTAAKPYEW-RKLEPEGEGPPPCMYATASARS-DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGV-- 329 (999)
Q Consensus 254 ndv~~yDl~s~~~~W-~~v~~~~~~P~~r~~~~a~~~~-~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~-- 329 (999)
+.+|+|+-.+....+ ..+...+.+..+..-.+|.... ++++|+|-| +..|+|+..+. + + .++.
T Consensus 88 ~~~w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG--------~~ywr~d~~~~---~-~-d~gyPr 154 (207)
T 1pex_A 88 RKFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG--------NQVWRYDDTNH---I-M-DKDYPR 154 (207)
T ss_dssp TEEEEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET--------TEEEEEETTTT---E-E-CSSCCC
T ss_pred CEEEEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeC--------CEEEEEeCcCc---c-c-cCCCCc
Confidence 467888743320011 2333333221122334444433 489999976 34677776543 1 1 1111
Q ss_pred ------CCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEE
Q 001895 330 ------SPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (999)
Q Consensus 330 ------~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~ 377 (999)
.-.+..-.+|...++++|.|-| +..|.||..+.+-..
T Consensus 155 ~i~~~~~Gip~~iDaAf~~~g~~YfFkg-----------~~y~rf~~~~~~v~~ 197 (207)
T 1pex_A 155 LIEEDFPGIGDKVDAVYEKNGYIYFFNG-----------PIQFEYSIWSNRIVR 197 (207)
T ss_dssp BHHHHSTTSCSCCSEEEEETTEEEEEET-----------TEEEEEETTTTEEEE
T ss_pred cHHHcCCCCCCCccEEEEcCCcEEEEEC-----------CEEEEEeCCccEEec
Confidence 0112223455556899999966 348899988876443
No 209
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=64.39 E-value=1.4e+02 Score=31.02 Aligned_cols=93 Identities=12% Similarity=0.084 Sum_probs=47.3
Q ss_pred CeEEEEECCCCcEEE-ecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCC
Q 001895 150 ADVHCYDVLTNKWSR-ITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~-l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~ 227 (999)
..+.+||+.+.+-.. +... ...-.+++.. ++.+++.|+.+ ..+.+||+.+. |...... ...
T Consensus 77 ~~i~vwd~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~l~sgs~D------~~v~lWd~~~~---~~~~~~~---~~h 139 (304)
T 2ynn_A 77 FRIRVFNYNTGEKVVDFEAH-----PDYIRSIAVHPTKPYVLSGSDD------LTVKLWNWENN---WALEQTF---EGH 139 (304)
T ss_dssp SEEEEEETTTCCEEEEEECC-----SSCEEEEEECSSSSEEEEEETT------SCEEEEEGGGT---TEEEEEE---CCC
T ss_pred CEEEEEECCCCcEEEEEeCC-----CCcEEEEEEcCCCCEEEEECCC------CeEEEEECCCC---cchhhhh---ccc
Confidence 367888988765322 2111 1111122222 34566666642 57889998764 3332211 111
Q ss_pred Cc-ccEEEEEC-CcEEEEEccCCCCCCCCeEEEEECCCC
Q 001895 228 RY-GHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 228 R~-~h~~~v~~-~~~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
.. -.+++... +..+++.|+.++ .+..||+.+.
T Consensus 140 ~~~v~~v~~~p~~~~~l~sgs~D~-----~v~iwd~~~~ 173 (304)
T 2ynn_A 140 EHFVMCVAFNPKDPSTFASGCLDR-----TVKVWSLGQS 173 (304)
T ss_dssp CSCEEEEEECTTCTTEEEEEETTS-----EEEEEETTCS
T ss_pred CCcEEEEEECCCCCCEEEEEeCCC-----eEEEEECCCC
Confidence 11 12222222 335778888775 5788888655
No 210
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=63.83 E-value=4.3 Score=44.92 Aligned_cols=68 Identities=21% Similarity=0.200 Sum_probs=39.1
Q ss_pred cCCeEEEecCCCCHH----------------HHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChH------------
Q 001895 697 KAPIKIFGDLHGQFG----------------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSL------------ 748 (999)
Q Consensus 697 ~~~i~vvGDiHG~~~----------------~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~------------ 748 (999)
+-.|+.+.|+||++. .+..+++...-.... .-+|..||.+..-+.+-
T Consensus 11 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~~-----~llld~GD~~qGs~~~~~~~~~~~~~g~~ 85 (341)
T 3gve_A 11 HLSILATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQNPN-----TLLVDNGDLIQGNPLGEYAVKYQKDDIIS 85 (341)
T ss_dssp EEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHHCSS-----EEEEECSCCSCSSHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEeccCCCccCccccCCCccccCCHHHHHHHHHHHHhcCCC-----EEEEecCccCCCcHHHHHhhhcccccccc
Confidence 345888999999873 345555544211111 14556999997543321
Q ss_pred -----HHHHHHHHhhhcCCCCEEEecCCccc
Q 001895 749 -----ETITLLLALKVEYPNNVHLIRGNHEA 774 (999)
Q Consensus 749 -----evl~ll~~lk~~~P~~v~llrGNHE~ 774 (999)
-++.+|-.|.. . .+..||||.
T Consensus 86 ~g~~~~~~~~ln~lg~----D-a~tlGNHEf 111 (341)
T 3gve_A 86 GTKTHPIISVMNALKY----D-AGTLGNHEF 111 (341)
T ss_dssp TSSCCHHHHHHHHTTC----C-BEECCGGGG
T ss_pred cccccHHHHHHHhhCC----C-eeeccchhh
Confidence 24455555432 2 355799997
No 211
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=63.72 E-value=1.3e+02 Score=30.58 Aligned_cols=189 Identities=7% Similarity=0.063 Sum_probs=91.5
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCC-CcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTP-RAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~p-R~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~ 226 (999)
..+.+||+.......+...+..+.. ..-++.++. ++.+|+.+.. ....+++||.... ....- ..+.
T Consensus 51 ~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~-----~~~~i~~~d~~g~---~~~~~---~~~~ 119 (286)
T 1q7f_A 51 HRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS-----PTHQIQIYNQYGQ---FVRKF---GATI 119 (286)
T ss_dssp TEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG-----GGCEEEEECTTSC---EEEEE---CTTT
T ss_pred CEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC-----CCCEEEEECCCCc---EEEEe---cCcc
Confidence 3688888875544444332211111 122344442 4688888642 1246889995442 22211 1111
Q ss_pred CCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCC
Q 001895 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVP 306 (999)
Q Consensus 227 ~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~ 306 (999)
...-+.+++..++.+|+....+ +.+++||.... ....+...... ..-...+.-.++.+|+....
T Consensus 120 ~~~~~~i~~~~~g~l~v~~~~~-----~~i~~~~~~g~--~~~~~~~~~~~---~~p~~i~~~~~g~l~v~~~~------ 183 (286)
T 1q7f_A 120 LQHPRGVTVDNKGRIIVVECKV-----MRVIIFDQNGN--VLHKFGCSKHL---EFPNGVVVNDKQEIFISDNR------ 183 (286)
T ss_dssp CSCEEEEEECTTSCEEEEETTT-----TEEEEECTTSC--EEEEEECTTTC---SSEEEEEECSSSEEEEEEGG------
T ss_pred CCCceEEEEeCCCCEEEEECCC-----CEEEEEcCCCC--EEEEeCCCCcc---CCcEEEEECCCCCEEEEECC------
Confidence 1223455555455788875432 46899997655 33333221110 11122223346888887543
Q ss_pred cccEEEEecCCCCeEEEEECC-CCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEc
Q 001895 307 LASAYGLAKHRDGRWEWAIAP-GVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (999)
Q Consensus 307 ~~d~~~~~~~~~~~W~w~~~~-g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v 378 (999)
...++.|+... ...+.... +. ...-.++++- ++.|||....+. ..|.+||+....-..+
T Consensus 184 ~~~i~~~~~~g--~~~~~~~~~g~---~~~p~~i~~d~~G~l~v~~~~~~--------~~i~~~~~~g~~~~~~ 244 (286)
T 1q7f_A 184 AHCVKVFNYEG--QYLRQIGGEGI---TNYPIGVGINSNGEILIADNHNN--------FNLTIFTQDGQLISAL 244 (286)
T ss_dssp GTEEEEEETTC--CEEEEESCTTT---SCSEEEEEECTTCCEEEEECSSS--------CEEEEECTTSCEEEEE
T ss_pred CCEEEEEcCCC--CEEEEEccCCc---cCCCcEEEECCCCCEEEEeCCCC--------EEEEEECCCCCEEEEE
Confidence 23466676532 22222221 11 1112233332 578888764311 2589999765544333
No 212
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=63.68 E-value=3.6 Score=48.78 Aligned_cols=36 Identities=14% Similarity=-0.053 Sum_probs=24.0
Q ss_pred eEEEeccccCCCCCh-----HHHHHHHHHhhhcCCCCEEEecCCccc
Q 001895 733 DYLFLGDYVDRGQHS-----LETITLLLALKVEYPNNVHLIRGNHEA 774 (999)
Q Consensus 733 ~~vfLGDyVDRG~~s-----~evl~ll~~lk~~~P~~v~llrGNHE~ 774 (999)
-+|..||++++.+.+ ..++.+|-.|. |+ + +. ||||.
T Consensus 126 Lll~~GD~~~gs~~~~~~~g~~~~~~ln~lg--~d--~-~~-GNHEf 166 (562)
T 2wdc_A 126 LVLDGGDTWTNSGLSLLTRGEAVVRWQNLVG--VD--H-MV-SHWEW 166 (562)
T ss_dssp EEEECSCCSSSSHHHHHHTTHHHHHHHHHHT--CC--E-EC-CSGGG
T ss_pred EEEeCCCCCCcchhhhhhCCHHHHHHHHhhC--Cc--E-Ee-cchhc
Confidence 466799999976533 35566666654 32 4 46 99996
No 213
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=63.25 E-value=1.5e+02 Score=31.04 Aligned_cols=137 Identities=12% Similarity=0.024 Sum_probs=70.3
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CC-EEEEEcccCC---------------CC-----CCcCcEEEEe
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GT-MVVIQGGIGP---------------AG-----LSAEDLHVLD 207 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~-~iyv~GG~~~---------------~~-----~~~~dv~vyD 207 (999)
..+|.+|+.+++...+.... . ..+.+.. ++ .|++...... .+ .....+|++|
T Consensus 85 ~~l~~~~~~~g~~~~l~~~~---~---~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d 158 (347)
T 2gop_A 85 SEIWVADLETLSSKKILEAK---N---IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFD 158 (347)
T ss_dssp EEEEEEETTTTEEEEEEEES---E---EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEE
T ss_pred ceEEEEECCCCceEEEEcCC---C---ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEE
Confidence 46999999998887775431 1 1222222 34 4444431100 00 1135799999
Q ss_pred cCCCCCce-EEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCC---C-CCeEEEEECCCCCceEEEcccCCCCCCCcc
Q 001895 208 LTQQRPRW-HRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKR---P-LADVWALDTAAKPYEWRKLEPEGEGPPPCM 282 (999)
Q Consensus 208 ~~t~t~kW-~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~---~-~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~ 282 (999)
+.+. +. ..+.. + .....+...++ +++.+..+... . ..++|.+| +. ++..+... .
T Consensus 159 ~~~~--~~~~~l~~----~---~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~--~~~~l~~~-------~ 217 (347)
T 2gop_A 159 TESE--EVIEEFEK----P---RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DG--KEEKMFEK-------V 217 (347)
T ss_dssp TTTT--EEEEEEEE----E---TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TT--EEEEEEEE-------E
T ss_pred CCCC--eEEeeecC----C---CcccccCCCCe-EEEEEecccccccccccccEEEeC--CC--ceEEeccC-------c
Confidence 9875 34 44441 2 33344455665 55555443321 2 56899999 55 67666432 1
Q ss_pred ceEEEEEeCCEEEEEeccCCC--CCCcccEEEEe
Q 001895 283 YATASARSDGLLLLCGGRDAS--SVPLASAYGLA 314 (999)
Q Consensus 283 ~~~a~~~~~~~LyvfGG~~~~--~~~~~d~~~~~ 314 (999)
..... ..+++.+++++.... ......+|.++
T Consensus 218 ~~~~~-spdg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 218 SFYAV-DSDGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp SEEEE-EECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred ceeeE-CCCCCEEEEEEccccCCccccceEEEEC
Confidence 11222 456665555554322 11245677777
No 214
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=62.51 E-value=1.7e+02 Score=31.48 Aligned_cols=189 Identities=12% Similarity=0.112 Sum_probs=87.8
Q ss_pred ccCeEEEEECCCCcEEEecCCCCCCCCC-cCcEEEEe---CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCC
Q 001895 148 ATADVHCYDVLTNKWSRITPFGEPPTPR-AAHVATAV---GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGP 223 (999)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR-~~hsa~~~---g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~ 223 (999)
....+..||+.+.+-...-... .+... ..-....+ ++.+++.|+.+ ..+.+||+.........+. +
T Consensus 178 ~D~~i~~wd~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~l~sgs~D------~~v~~wd~~~~~~~~~~~~--~- 247 (380)
T 3iz6_a 178 GDQTCVLWDVTTGQRISIFGSE-FPSGHTADVLSLSINSLNANMFISGSCD------TTVRLWDLRITSRAVRTYH--G- 247 (380)
T ss_dssp TTSCEEEECTTTCCEEEEECCC-SSSSCCSCEEEEEECSSSCCEEEEEETT------SCEEEEETTTTCCCCEEEC--C-
T ss_pred CCCcEEEEEcCCCcEEEEeecc-cCCCCccCeEEEEeecCCCCEEEEEECC------CeEEEEECCCCCcceEEEC--C-
Confidence 4457888999887654432211 01111 11112222 45777788753 5788999874311122221 1
Q ss_pred CCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEc-ccCCCC-C-CCccceEEEEEeCCEEEEEecc
Q 001895 224 GPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKL-EPEGEG-P-PPCMYATASARSDGLLLLCGGR 300 (999)
Q Consensus 224 ~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v-~~~~~~-P-~~r~~~~a~~~~~~~LyvfGG~ 300 (999)
..-.-.+++...++.+++.|+.|+ .+..||+.+. +-... ...... . ........+...++.+++.|+.
T Consensus 248 --h~~~v~~v~~~p~~~~l~s~s~D~-----~i~lwd~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~ 318 (380)
T 3iz6_a 248 --HEGDINSVKFFPDGQRFGTGSDDG-----TCRLFDMRTG--HQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYS 318 (380)
T ss_dssp --CSSCCCEEEECTTSSEEEEECSSS-----CEEEEETTTT--EEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECT
T ss_pred --cCCCeEEEEEecCCCeEEEEcCCC-----eEEEEECCCC--cEEEEecccccccccccCceEEEEECCCCCEEEEEEC
Confidence 001112334444446778888776 5788899876 33222 111100 0 0001122333446777777765
Q ss_pred CCCCCCcccEEEEecCCCCeEEEEECCCCCC-CCcceeEEEE-ECCEEEEEcCcCCCCCCcccCCeEEEEECCC
Q 001895 301 DASSVPLASAYGLAKHRDGRWEWAIAPGVSP-SPRYQHAAVF-VNARLHVSGGALGGGRMVEDSSSVAVLDTAA 372 (999)
Q Consensus 301 ~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P-~~R~~hsav~-~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t 372 (999)
++ .+..++.... +.......-... ..+. .++++ -++.+++.||.++ .|.++|+..
T Consensus 319 dg------~i~vwd~~~~-~~~~~~~~~~~~h~~~v-~~l~~s~dg~~l~sgs~D~---------~i~iW~~~~ 375 (380)
T 3iz6_a 319 NG------DCYVWDTLLA-EMVLNLGTLQNSHEGRI-SCLGLSSDGSALCTGSWDK---------NLKIWAFSG 375 (380)
T ss_dssp TS------CEEEEETTTC-CEEEEECCSCSSCCCCC-CEEEECSSSSEEEEECTTS---------CEEEEECCS
T ss_pred CC------CEEEEECCCC-ceEEEEecccCCCCCce-EEEEECCCCCEEEEeeCCC---------CEEEEecCC
Confidence 43 2444554333 111111110000 1111 22223 3678888888744 266666654
No 215
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=62.32 E-value=1.4e+02 Score=32.96 Aligned_cols=66 Identities=9% Similarity=-0.029 Sum_probs=33.9
Q ss_pred EEEEcccCCCCCCcCcEEEEecCCCCC-ceEEEeecCCC-CCCCcccEEEEEC-CcEEEEEccCCCCCCCCeEEEEECCC
Q 001895 187 VVIQGGIGPAGLSAEDLHVLDLTQQRP-RWHRVVVQGPG-PGPRYGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAA 263 (999)
Q Consensus 187 iyv~GG~~~~~~~~~dv~vyD~~t~t~-kW~~v~~~g~~-P~~R~~h~~~v~~-~~~Lyv~GG~~g~~~~ndv~~yDl~s 263 (999)
+++.|+.+ ..+.+||+.+... .+...... .. .....-++++... +..+++.|+.++ .+..||+.+
T Consensus 196 ~l~s~~~d------g~i~vwd~~~~~~~~~~~~~~~-~~~~h~~~v~~v~~~p~~~~~l~s~~~dg-----~i~i~d~~~ 263 (430)
T 2xyi_A 196 YLLSASDD------HTICLWDINATPKEHRVIDAKN-IFTGHTAVVEDVAWHLLHESLFGSVADDQ-----KLMIWDTRN 263 (430)
T ss_dssp EEEEECTT------SCEEEEETTSCCBGGGEEECSE-EECCCSSCEEEEEECSSCTTEEEEEETTS-----EEEEEETTC
T ss_pred eEEEEeCC------CeEEEEeCCCCCCCCceeccce-eecCCCCCEeeeEEeCCCCCEEEEEeCCC-----eEEEEECCC
Confidence 66666642 5689999987321 12211100 01 1111222333332 335777777654 688899976
Q ss_pred C
Q 001895 264 K 264 (999)
Q Consensus 264 ~ 264 (999)
.
T Consensus 264 ~ 264 (430)
T 2xyi_A 264 N 264 (430)
T ss_dssp S
T ss_pred C
Confidence 4
No 216
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=62.07 E-value=1.6e+02 Score=31.09 Aligned_cols=100 Identities=13% Similarity=0.175 Sum_probs=46.9
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCce----EEEeecCCCCC
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRW----HRVVVQGPGPG 226 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW----~~v~~~g~~P~ 226 (999)
.+|.+|..+++.+.+.... ......+..+.-++.+|+.+.. ...+.+|++.... .. ......+..|.
T Consensus 78 ~~~~~~~~~g~~~~~~~~~--~~~~~p~~~~~dg~~l~~~~~~------~~~v~~~~~~~~g-~~~~~~~~~~~~g~~~~ 148 (361)
T 3scy_A 78 SAFAFDKEKGTLHLLNTQK--TMGADPCYLTTNGKNIVTANYS------GGSITVFPIGQDG-ALLPASDVIEFKGSGPD 148 (361)
T ss_dssp EEEEEETTTTEEEEEEEEE--CSSSCEEEEEECSSEEEEEETT------TTEEEEEEBCTTS-CBCSCSEEEECCCCCSC
T ss_pred EEEEEeCCCCcEEEeeEec--cCCCCcEEEEECCCEEEEEECC------CCEEEEEEeCCCC-cCcccceeEEccCCCCC
Confidence 3456666667777665431 0111222233334466665432 2468888886531 11 11111222222
Q ss_pred C-----CcccEEEEECCc-EEEEEccCCCCCCCCeEEEEECCCC
Q 001895 227 P-----RYGHVMALVGQR-YLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 227 ~-----R~~h~~~v~~~~-~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
+ ...|++++-.++ +||+.+..+ +.+++|++...
T Consensus 149 ~~~~~~~~~~~~~~spdg~~l~~~~~~~-----~~v~v~~~~~~ 187 (361)
T 3scy_A 149 KERQTMPHLHCVRITPDGKYLLADDLGT-----DQIHKFNINPN 187 (361)
T ss_dssp TTTCSSCCEEEEEECTTSSEEEEEETTT-----TEEEEEEECTT
T ss_pred ccccCCCcceEEEECCCCCEEEEEeCCC-----CEEEEEEEcCC
Confidence 1 112555555443 577654322 36777777654
No 217
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=61.54 E-value=1.4e+02 Score=30.18 Aligned_cols=179 Identities=8% Similarity=-0.036 Sum_probs=89.6
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCc
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~ 229 (999)
.+++||+. .++..+.... ....-++++.. ++.+|+.... ...+++||. +. +........ ....
T Consensus 79 ~i~~~~~~-g~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~d~-~g--~~~~~~~~~---~~~~ 142 (299)
T 2z2n_A 79 KIGRITKK-GIIKEYTLPN---PDSAPYGITEGPNGDIWFTEMN------GNRIGRITD-DG--KIREYELPN---KGSY 142 (299)
T ss_dssp EEEEECTT-SCEEEEECSS---TTCCEEEEEECTTSCEEEEETT------TTEEEEECT-TC--CEEEEECSS---TTCC
T ss_pred eEEEECCC-CcEEEEeCCC---cCCCceeeEECCCCCEEEEecC------CceEEEECC-CC--CEEEecCCC---CCCC
Confidence 57888876 4555543210 11223444444 3577776532 246899998 32 344443111 1223
Q ss_pred ccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEE-eCCEEEEEeccCCCCCCcc
Q 001895 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASAR-SDGLLLLCGGRDASSVPLA 308 (999)
Q Consensus 230 ~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~-~~~~LyvfGG~~~~~~~~~ 308 (999)
-++++...++.+|+.... .+.+++||+ +. +...+..... .....+... .++.||+.... ..
T Consensus 143 ~~~i~~~~~g~l~v~~~~-----~~~i~~~~~-~g--~~~~~~~~~~----~~~~~~i~~~~~g~l~v~~~~------~~ 204 (299)
T 2z2n_A 143 PSFITLGSDNALWFTENQ-----NNAIGRITE-SG--DITEFKIPTP----ASGPVGITKGNDDALWFVEII------GN 204 (299)
T ss_dssp EEEEEECTTSCEEEEETT-----TTEEEEECT-TC--CEEEEECSST----TCCEEEEEECTTSSEEEEETT------TT
T ss_pred CceEEEcCCCCEEEEeCC-----CCEEEEEcC-CC--cEEEeeCCCC----CCcceeEEECCCCCEEEEccC------Cc
Confidence 345555545578876422 246899999 66 4544321111 111122223 35778886432 23
Q ss_pred cEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEc
Q 001895 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (999)
Q Consensus 309 d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v 378 (999)
.++.++. ++.+.....+.. ...-.++++- ++.|||.... .+.|.+||+ +.+...+
T Consensus 205 ~i~~~~~--~g~~~~~~~~~~---~~~~~~i~~~~~g~l~v~~~~---------~~~i~~~d~-~g~~~~~ 260 (299)
T 2z2n_A 205 KIGRITT--SGEITEFKIPTP---NARPHAITAGAGIDLWFTEWG---------ANKIGRLTS-NNIIEEY 260 (299)
T ss_dssp EEEEECT--TCCEEEEECSST---TCCEEEEEECSTTCEEEEETT---------TTEEEEEET-TTEEEEE
T ss_pred eEEEECC--CCcEEEEECCCC---CCCceeEEECCCCCEEEeccC---------CceEEEECC-CCceEEE
Confidence 4667766 344443322211 1122233333 5688886421 355999998 4555443
No 218
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=61.50 E-value=1e+02 Score=36.17 Aligned_cols=249 Identities=17% Similarity=0.100 Sum_probs=115.1
Q ss_pred CeEEEEECCCCcEEEecCCCC--------CCCCCcCcEEEEeCC-EEEEEcccCCCCCCcCcEEEEecCCCCCceEEEee
Q 001895 150 ADVHCYDVLTNKWSRITPFGE--------PPTPRAAHVATAVGT-MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVV 220 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~--------~P~pR~~hsa~~~g~-~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~ 220 (999)
+.+.++|..+.+=.+.-..+. .|.+|.....+...+ .+|+.= .....++++|.... +...+.
T Consensus 266 ~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~------~~~g~v~~vd~~~~--~~~~v~- 336 (567)
T 1qks_A 266 PQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV------KETGKILLVDYTDL--NNLKTT- 336 (567)
T ss_dssp TEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE------TTTTEEEEEETTCS--SEEEEE-
T ss_pred CeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEe------cCCCeEEEEecCCC--ccceee-
Confidence 566788877765443322211 123444433332333 333221 12357899998764 244444
Q ss_pred cCCCCCCCcccEEEEECCc-EEEEEccCCCCCCCCeEEEEECCCCCceEEEcccC-CCCCCCccceEEEEEe-CCEEEEE
Q 001895 221 QGPGPGPRYGHVMALVGQR-YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPE-GEGPPPCMYATASARS-DGLLLLC 297 (999)
Q Consensus 221 ~g~~P~~R~~h~~~v~~~~-~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~-~~~P~~r~~~~a~~~~-~~~Lyvf 297 (999)
..+.++.-|.+..-.++ ++|+... ..+.+.++|+.+....+. -+. +..|.+.+... .... .+.+|+.
T Consensus 337 --~i~~~~~~~d~~~~pdgr~~~va~~-----~sn~V~ViD~~t~kl~~~--i~vgg~~Phpg~g~~-~~~p~~g~v~~t 406 (567)
T 1qks_A 337 --EISAERFLHDGGLDGSHRYFITAAN-----ARNKLVVIDTKEGKLVAI--EDTGGQTPHPGRGAN-FVHPTFGPVWAT 406 (567)
T ss_dssp --EEECCSSEEEEEECTTSCEEEEEEG-----GGTEEEEEETTTTEEEEE--EECSSSSBCCTTCEE-EEETTTEEEEEE
T ss_pred --eeeccccccCceECCCCCEEEEEeC-----CCCeEEEEECCCCcEEEE--EeccCcCCCCcccee-eECCCCCcEEEe
Confidence 34566777777665443 4555432 246799999998833332 234 44444433322 2222 3566665
Q ss_pred eccCCCCCCcccEEEEecCC----CCeEEEEECCCCCCCCcceeEEEEE--CCEEEEEcCcCCCCCCcccCCeEEEEECC
Q 001895 298 GGRDASSVPLASAYGLAKHR----DGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTA 371 (999)
Q Consensus 298 GG~~~~~~~~~d~~~~~~~~----~~~W~w~~~~g~~P~~R~~hsav~~--~~~L~V~GG~~~~~~~~~~~~~v~vyD~~ 371 (999)
+-... ..+..++... ...|+......... .....+... +..+||---.+... ...+.|.+||..
T Consensus 407 ~~~g~-----~~Vsvid~~~~~~~~~~~kvv~~i~~~g--~g~~~i~~~p~~~~l~v~~~~~~~~---~~~~~v~v~d~~ 476 (567)
T 1qks_A 407 SHMGD-----DSVALIGTDPEGHPDNAWKILDSFPALG--GGSLFIKTHPNSQYLYVDATLNPEA---EISGSVAVFDIK 476 (567)
T ss_dssp EBSSS-----SEEEEEECCTTTCTTTBTSEEEEEECSC--SCCCCEECCTTCSEEEEECTTCSSH---HHHTCEEEEEGG
T ss_pred CCCCC-----CeEEEecCCCCCCccccCEEEEEEecCC--CCCEEEEeCCCCCeEEEecCCCCCc---ccCceEEEEECC
Confidence 42211 1233333322 11254333221111 111111222 34788753221110 014579999988
Q ss_pred CC-------eEEEcccCcCCCCCCCcccccCCCCCccCCCCcceeEEEEE-CCEEEEEcCCCCCcCcCcEEEeeccccc
Q 001895 372 AG-------VWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAV-GDLIFIYGGLRGGVLLDDLLVAEDLAAA 442 (999)
Q Consensus 372 t~-------~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~-~~~LyV~GG~~~~~~l~Dv~~ld~~~~~ 442 (999)
+. .+..+..- .|.. . .....|..|-...- |..||+--+ ++...-+++.++|.....
T Consensus 477 ~~~~~g~~~~~~~~~~~-------~~~~--~-----~~~~~~~~~~~~~~~G~~~~~s~~-~~~~~~~~i~v~D~~t~~ 540 (567)
T 1qks_A 477 AMTGDGSDPEFKTLPIA-------EWAG--I-----TEGQPRVVQGEFNKDGTEVWFSVW-NGKDQESALVVVDDKTLE 540 (567)
T ss_dssp GCCCSSSCCCEEEECHH-------HHHT--C-----CSSCCEEEEEEECTTSSEEEEEEE-CCTTSCCEEEEEETTTTE
T ss_pred cccccccCCCcEEeccc-------cccc--c-----CCCCcceEeeeECCCCCEEEEEee-cCCCCCCcEEEEECCCce
Confidence 76 23333210 0000 0 00124666654443 668888622 223346778888876644
No 219
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=61.24 E-value=2.4e+02 Score=32.62 Aligned_cols=194 Identities=10% Similarity=0.091 Sum_probs=90.0
Q ss_pred CeEEEEEC--CCCcEEEecCCCCCCCCCcCcEEEEe-----CC-EEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeec
Q 001895 150 ADVHCYDV--LTNKWSRITPFGEPPTPRAAHVATAV-----GT-MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ 221 (999)
Q Consensus 150 ~dv~~yD~--~t~~W~~l~~~g~~P~pR~~hsa~~~-----g~-~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~ 221 (999)
+.+..||+ .+.+-..--..+ ..-+.++.. ++ .+|+..-. .+.+.+||..+.. .-..+...
T Consensus 200 ~~V~v~D~~~~t~~~~~~i~~g-----~~p~~va~sp~~~~dg~~l~v~~~~------~~~v~v~D~~t~~-~~~~i~~~ 267 (543)
T 1nir_A 200 ARIDMIDLWAKEPTKVAEIKIG-----IEARSVESSKFKGYEDRYTIAGAYW------PPQFAIMDGETLE-PKQIVSTR 267 (543)
T ss_dssp SEEEEEETTSSSCEEEEEEECC-----SEEEEEEECCSTTCTTTEEEEEEEE------SSEEEEEETTTCC-EEEEEECC
T ss_pred CeEEEEECcCCCCcEEEEEecC-----CCcceEEeCCCcCCCCCEEEEEEcc------CCeEEEEeccccc-cceeeccc
Confidence 57899999 665433221122 122333333 34 55554322 2568899988753 22333321
Q ss_pred CC-------CCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceE-EEcccCCCCCCCccceEEEEEeCCE
Q 001895 222 GP-------GPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEW-RKLEPEGEGPPPCMYATASARSDGL 293 (999)
Q Consensus 222 g~-------~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W-~~v~~~~~~P~~r~~~~a~~~~~~~ 293 (999)
+. .|.+|..+.+..-.+..+|+.... .+.++.+|..+..... ..+. .+. .-+......+++
T Consensus 268 g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~-----~g~i~vvd~~~~~~l~~~~i~-~~~-----~~~~~~~spdg~ 336 (543)
T 1nir_A 268 GMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE-----TGKVLLVNYKDIDNLTVTSIG-AAP-----FLHDGGWDSSHR 336 (543)
T ss_dssp EECSSSCCEESCCCEEEEEECSSSSEEEEEETT-----TTEEEEEECTTSSSCEEEEEE-CCS-----SCCCEEECTTSC
T ss_pred CcccCccccccCCceEEEEECCCCCEEEEEECC-----CCeEEEEEecCCCcceeEEec-cCc-----CccCceECCCCC
Confidence 11 123343333333334456665432 2579999987642111 1222 111 222233334555
Q ss_pred EEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE--CCEEEEEcCcCCCCCCcccCCeEEEEECC
Q 001895 294 LLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTA 371 (999)
Q Consensus 294 LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~--~~~L~V~GG~~~~~~~~~~~~~v~vyD~~ 371 (999)
.++..+.. .+.+..+|..+. +.......+..|.+-..... +. ++.+|+.+... .+.|-++|+.
T Consensus 337 ~l~va~~~-----~~~v~v~D~~tg-~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~--------d~~V~v~d~~ 401 (543)
T 1nir_A 337 YFMTAANN-----SNKVAVIDSKDR-RLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLG--------DGSISLIGTD 401 (543)
T ss_dssp EEEEEEGG-----GTEEEEEETTTT-EEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSS--------SSEEEEEECC
T ss_pred EEEEEecC-----CCeEEEEECCCC-eEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCC--------CceEEEEEeC
Confidence 33333321 123444555543 43333333333443222222 23 36788876431 2458888887
Q ss_pred CC-----eEEEcccC
Q 001895 372 AG-----VWCDTKSV 381 (999)
Q Consensus 372 t~-----~W~~v~~~ 381 (999)
+. .|..+..+
T Consensus 402 ~~~~~~~~~~~v~~l 416 (543)
T 1nir_A 402 PKNHPQYAWKKVAEL 416 (543)
T ss_dssp TTTCTTTBTSEEEEE
T ss_pred CCCCchhcCeEEEEE
Confidence 72 26666555
No 220
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=61.06 E-value=5.6 Score=43.91 Aligned_cols=68 Identities=18% Similarity=0.082 Sum_probs=38.2
Q ss_pred cCCeEEEecCCCCHH----------------HHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChH------------
Q 001895 697 KAPIKIFGDLHGQFG----------------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSL------------ 748 (999)
Q Consensus 697 ~~~i~vvGDiHG~~~----------------~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~------------ 748 (999)
+-.|+-..|+||++. .+..+++...-... ..-+|..||.+..-+.+-
T Consensus 8 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~-----n~llld~GD~~qGs~~~~~~~~~~~~~g~~ 82 (339)
T 3jyf_A 8 DLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVK-----NSVLVDNGDVIQGSPLGDYMAAKGLKEGDV 82 (339)
T ss_dssp EEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCS-----CEEEEECSCCSSSSHHHHHHHHHCCCTTCC
T ss_pred eEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCC-----CEEEEECCCCCCCchhHHhhhhcccccccc
Confidence 345788999999874 34445555432111 124566999997433221
Q ss_pred -HHHHHHHHhhhcCCCCEEEecCCccc
Q 001895 749 -ETITLLLALKVEYPNNVHLIRGNHEA 774 (999)
Q Consensus 749 -evl~ll~~lk~~~P~~v~llrGNHE~ 774 (999)
.++.+|-.|.. . .+..||||.
T Consensus 83 ~p~~~~mn~lg~----D-~~t~GNHEf 104 (339)
T 3jyf_A 83 HPVYKAMNTLNY----A-VGNLGNHEF 104 (339)
T ss_dssp CHHHHHHTTSCC----S-EEECCGGGG
T ss_pred hHHHHHHHhcCC----C-EEecchhhh
Confidence 23444444321 2 345699997
No 221
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=60.21 E-value=1.5e+02 Score=30.01 Aligned_cols=181 Identities=9% Similarity=-0.012 Sum_probs=93.7
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
+.+++||+. ..+....... ....-++++.. ++.+|+.... ...+++||... ++...... ....
T Consensus 36 ~~v~~~d~~-~~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~g---~~~~~~~~---~~~~ 99 (299)
T 2z2n_A 36 NMISCINLD-GKITEYPLPT---PDAKVMCLTISSDGEVWFTENA------ANKIGRITKKG---IIKEYTLP---NPDS 99 (299)
T ss_dssp TEEEEECTT-CCEEEEECSS---TTCCEEEEEECTTSCEEEEETT------TTEEEEECTTS---CEEEEECS---STTC
T ss_pred CcEEEEcCC-CCeEEecCCc---ccCceeeEEECCCCCEEEeCCC------CCeEEEECCCC---cEEEEeCC---CcCC
Confidence 368889988 7777654321 11222344443 4577776432 14588999863 35554311 1223
Q ss_pred cccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcc
Q 001895 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (999)
Q Consensus 229 ~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~ 308 (999)
.-++++...++.||+....+ ..+++||+ +. +.......... ......+.-.++.+|+.... ..
T Consensus 100 ~~~~i~~~~~g~l~v~~~~~-----~~i~~~d~-~g--~~~~~~~~~~~---~~~~~i~~~~~g~l~v~~~~------~~ 162 (299)
T 2z2n_A 100 APYGITEGPNGDIWFTEMNG-----NRIGRITD-DG--KIREYELPNKG---SYPSFITLGSDNALWFTENQ------NN 162 (299)
T ss_dssp CEEEEEECTTSCEEEEETTT-----TEEEEECT-TC--CEEEEECSSTT---CCEEEEEECTTSCEEEEETT------TT
T ss_pred CceeeEECCCCCEEEEecCC-----ceEEEECC-CC--CEEEecCCCCC---CCCceEEEcCCCCEEEEeCC------CC
Confidence 33455555455788865332 46899998 54 34433211110 11122222336788886421 23
Q ss_pred cEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEc
Q 001895 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (999)
Q Consensus 309 d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v 378 (999)
.++.++. +++......+.. ...-.++++. ++.|||.... .+.|.+||+ ++++..+
T Consensus 163 ~i~~~~~--~g~~~~~~~~~~---~~~~~~i~~~~~g~l~v~~~~---------~~~i~~~~~-~g~~~~~ 218 (299)
T 2z2n_A 163 AIGRITE--SGDITEFKIPTP---ASGPVGITKGNDDALWFVEII---------GNKIGRITT-SGEITEF 218 (299)
T ss_dssp EEEEECT--TCCEEEEECSST---TCCEEEEEECTTSSEEEEETT---------TTEEEEECT-TCCEEEE
T ss_pred EEEEEcC--CCcEEEeeCCCC---CCcceeEEECCCCCEEEEccC---------CceEEEECC-CCcEEEE
Confidence 5677776 445544333211 1112233333 4678886432 346899999 7777654
No 222
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=59.77 E-value=2.3e+02 Score=34.02 Aligned_cols=151 Identities=13% Similarity=0.074 Sum_probs=78.0
Q ss_pred cCcEEEEecCCCCCc-eEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCC--CCceEEEcccCCC
Q 001895 200 AEDLHVLDLTQQRPR-WHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA--KPYEWRKLEPEGE 276 (999)
Q Consensus 200 ~~dv~vyD~~t~t~k-W~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s--~~~~W~~v~~~~~ 276 (999)
..++|++|+.+...+ |..+... .... ...+.-.++.||+..-.+ .....++++|+.+ . .|+.+.+...
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~---~~~~--~~~~~~dg~~l~~~s~~~--~~~~~l~~~d~~~~~~--~~~~l~~~~~ 363 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPD---LKAQ--WDFVDGVGDQLWFVSGDG--APLKKIVRVDLSGSTP--RFDTVVPESK 363 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECS---SSSC--EEEEEEETTEEEEEECTT--CTTCEEEEEECSSSSC--EEEEEECCCS
T ss_pred cceEEEEECCCCCCcccEEecCC---CCce--EEEEeccCCEEEEEECCC--CCCCEEEEEeCCCCcc--ccEEEecCCC
Confidence 468999999874225 7777521 1111 112223344777765432 2245799999977 5 7988865432
Q ss_pred CCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEE-ECC-EEEEE-cCcC
Q 001895 277 GPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVF-VNA-RLHVS-GGAL 353 (999)
Q Consensus 277 ~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~-~~~-~L~V~-GG~~ 353 (999)
.. -..+...++.+++....++ ...+|.++.... ...... .|....-..... -++ .|++. .+..
T Consensus 364 ----~~-l~~~~~~~~~lv~~~~~dg----~~~l~~~~~~g~---~~~~l~--~~~~~~v~~~~~s~d~~~l~~~~ss~~ 429 (741)
T 1yr2_A 364 ----DN-LESVGIAGNRLFASYIHDA----KSQVLAFDLDGK---PAGAVS--LPGIGSASGLSGRPGDRHAYLSFSSFT 429 (741)
T ss_dssp ----SE-EEEEEEEBTEEEEEEEETT----EEEEEEEETTSC---EEEECB--CSSSCEEEEEECCBTCSCEEEEEEETT
T ss_pred ----Ce-EEEEEEECCEEEEEEEECC----EEEEEEEeCCCC---ceeecc--CCCCeEEEEeecCCCCCEEEEEEcCCC
Confidence 11 2233344788888766543 345666664322 112221 111111111111 133 33332 2221
Q ss_pred CCCCCcccCCeEEEEECCCCeEEEccc
Q 001895 354 GGGRMVEDSSSVAVLDTAAGVWCDTKS 380 (999)
Q Consensus 354 ~~~~~~~~~~~v~vyD~~t~~W~~v~~ 380 (999)
. ...++.||+.+++...+..
T Consensus 430 ~-------P~~i~~~d~~tg~~~~l~~ 449 (741)
T 1yr2_A 430 Q-------PATVLALDPATAKTTPWEP 449 (741)
T ss_dssp E-------EEEEEEEETTTTEEEECSC
T ss_pred C-------CCEEEEEECCCCcEEEEec
Confidence 1 3569999999998776654
No 223
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=58.96 E-value=2.3e+02 Score=36.06 Aligned_cols=94 Identities=16% Similarity=0.127 Sum_probs=48.0
Q ss_pred cCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe----CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCC
Q 001895 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV----GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPG 224 (999)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~----g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~ 224 (999)
.+.+.++|+.+.+....-.. ....-..+.+ +..+++.|+. ...+.+||+.+.. ....- .+
T Consensus 678 d~~v~vwd~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~l~sg~~------d~~v~vwd~~~~~--~~~~~-~~-- 741 (1249)
T 3sfz_A 678 DKKVKIWDSATGKLVHTYDE-----HSEQVNCCHFTNKSNHLLLATGSN------DFFLKLWDLNQKE--CRNTM-FG-- 741 (1249)
T ss_dssp TSEEEEEETTTCCEEEEEEC-----CSSCEEEEEECSSSSCCEEEEEET------TSCEEEEETTSSS--EEEEE-CC--
T ss_pred CCeEEEEECCCCceEEEEcC-----CCCcEEEEEEecCCCceEEEEEeC------CCeEEEEECCCcc--hhhee-cC--
Confidence 34688899988764433211 1111222222 2245555653 2468999998753 22211 11
Q ss_pred CCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCC
Q 001895 225 PGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 225 P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
.. ..-.+++...++.+++.|+.++ .+..||+.+.
T Consensus 742 h~-~~v~~~~~sp~~~~l~s~s~dg-----~v~vwd~~~~ 775 (1249)
T 3sfz_A 742 HT-NSVNHCRFSPDDELLASCSADG-----TLRLWDVRSA 775 (1249)
T ss_dssp CS-SCEEEEEECSSTTEEEEEESSS-----EEEEEEGGGT
T ss_pred CC-CCEEEEEEecCCCEEEEEECCC-----eEEEEeCCCC
Confidence 11 1112233333445777777665 5788888765
No 224
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=58.65 E-value=2.4e+02 Score=31.91 Aligned_cols=122 Identities=11% Similarity=0.089 Sum_probs=56.7
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~ 227 (999)
..+..||........+... ...-..+.+ +++.++.|+.+ ..+.+||.... .-..+. + ...
T Consensus 366 g~v~~~~~~~~~~~~~~~~------~~~v~~~~~s~dg~~l~~~~~d------~~v~~~~~~~~--~~~~~~--~--~~~ 427 (577)
T 2ymu_A 366 KTVKLWNRNGQLLQTLTGH------SSSVRGVAFSPDGQTIASASDD------KTVKLWNRNGQ--LLQTLT--G--HSS 427 (577)
T ss_dssp SEEEEEETTCCEEEEEECC------SSCEEEEEECTTSSCEEEEETT------SEEEEECTTCC--EEEEEE--C--CSS
T ss_pred CEEEEEcCCCCEEEEecCC------CCCeEEEEECCCCCEEEEEeCC------CEEEEEeCCCC--EEEEec--C--CCC
Confidence 3566777655444444321 111122222 34556666532 46888886442 122221 1 111
Q ss_pred CcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCC
Q 001895 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (999)
Q Consensus 228 R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~ 302 (999)
. -.+++...++.+++.|+.++ .+..||.... .-..+..... .....+...++++++.|+.++
T Consensus 428 ~-v~~~~~s~d~~~l~~~~~d~-----~v~~w~~~~~--~~~~~~~~~~-----~v~~~~~spd~~~las~~~d~ 489 (577)
T 2ymu_A 428 S-VWGVAFSPDDQTIASASDDK-----TVKLWNRNGQ--LLQTLTGHSS-----SVRGVAFSPDGQTIASASDDK 489 (577)
T ss_dssp C-EEEEEECTTSSEEEEEETTS-----EEEEEETTSC--EEEEEECCSS-----CEEEEEECTTSCEEEEEETTS
T ss_pred C-eEEEEECCCCCEEEEEcCCC-----EEEEEECCCC--EEEEEcCCCC-----CEEEEEEcCCCCEEEEEeCCC
Confidence 1 12233333445677777654 5777887554 3333322211 122223344677778777543
No 225
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=57.47 E-value=2.2e+02 Score=31.08 Aligned_cols=64 Identities=13% Similarity=0.111 Sum_probs=34.5
Q ss_pred CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCC
Q 001895 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (999)
Q Consensus 184 g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s 263 (999)
++..++.|+. ...+.+||+.+.. .-..+. +. ...-.++....++.+++.|+.++ .+..||+.+
T Consensus 203 ~~~~l~s~s~------D~~i~~wd~~~~~-~~~~~~--~h---~~~v~~~~~~~~g~~l~s~s~D~-----~v~vwd~~~ 265 (410)
T 1vyh_C 203 NGDHIVSASR------DKTIKMWEVQTGY-CVKTFT--GH---REWVRMVRPNQDGTLIASCSNDQ-----TVRVWVVAT 265 (410)
T ss_dssp SSSEEEEEET------TSEEEEEETTTCC-EEEEEE--CC---SSCEEEEEECTTSSEEEEEETTS-----CEEEEETTT
T ss_pred CCCEEEEEeC------CCeEEEEECCCCc-EEEEEe--CC---CccEEEEEECCCCCEEEEEcCCC-----eEEEEECCC
Confidence 3455666664 2578999998753 111121 11 11111222333446777787765 577788876
Q ss_pred C
Q 001895 264 K 264 (999)
Q Consensus 264 ~ 264 (999)
.
T Consensus 266 ~ 266 (410)
T 1vyh_C 266 K 266 (410)
T ss_dssp C
T ss_pred C
Confidence 5
No 226
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=56.73 E-value=1.8e+02 Score=29.93 Aligned_cols=119 Identities=13% Similarity=0.155 Sum_probs=54.8
Q ss_pred EEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEe-C---CEEEEEeccCCCCCCcccEEEEec
Q 001895 240 YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS-D---GLLLLCGGRDASSVPLASAYGLAK 315 (999)
Q Consensus 240 ~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~-~---~~LyvfGG~~~~~~~~~d~~~~~~ 315 (999)
.+++.|+.++ .+..||+.+....|..+...... ...-.++... + +.+++.|+.++. ..+|.+..
T Consensus 171 ~~l~sgs~D~-----~v~lwd~~~~~~~~~~~~~l~~H---~~~V~~v~~sp~~~~~~~las~s~D~~----v~iWd~~~ 238 (297)
T 2pm7_B 171 RKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGH---SDWVRDVAWSPTVLLRSYMASVSQDRT----CIIWTQDN 238 (297)
T ss_dssp CEEEEEETTS-----CEEEEEEETTTTEEEEEEEECCC---SSCEEEEEECCCCSSSEEEEEEETTSC----EEEEEESS
T ss_pred ceEEEEcCCC-----cEEEEEEcCCCceEEEEEEecCC---CCceEEEEECCCCCCceEEEEEECCCc----EEEEEeCC
Confidence 4777788776 35556665432256544322110 1112223332 2 477888876643 23444433
Q ss_pred CCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECC-CCeEEEcccC
Q 001895 316 HRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTA-AGVWCDTKSV 381 (999)
Q Consensus 316 ~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~-t~~W~~v~~~ 381 (999)
.. +.|........ .....-.++++. ++.+++.||.++ .|.+++.. .+.|..+..+
T Consensus 239 ~~-~~~~~~~~~~~-~~~~~v~~~~~s~~g~~las~~~D~---------~v~lw~~~~~g~w~~~~~~ 295 (297)
T 2pm7_B 239 EQ-GPWKKTLLKEE-KFPDVLWRASWSLSGNVLALSGGDN---------KVTLWKENLEGKWEPAGEV 295 (297)
T ss_dssp TT-SCCEEEESSSS-CCSSCEEEEEECSSSCCEEEEETTS---------CEEEEEECTTSCEEEC---
T ss_pred CC-Cccceeeeecc-cCCCcEEEEEECCCCCEEEEEcCCC---------cEEEEEECCCCcEEecccc
Confidence 21 23333332111 111222333333 577778877543 25556544 5689877654
No 227
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=56.24 E-value=1.9e+02 Score=29.93 Aligned_cols=191 Identities=11% Similarity=0.162 Sum_probs=91.6
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeC--CEEEEEcccCCCCCCcCc-EEEEecCCCCCceEEEeecCCCCCC
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVG--TMVVIQGGIGPAGLSAED-LHVLDLTQQRPRWHRVVVQGPGPGP 227 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g--~~iyv~GG~~~~~~~~~d-v~vyD~~t~t~kW~~v~~~g~~P~~ 227 (999)
.+++||+.+++.......+ ...+.++... +.+|+.+.. .+. +++|++.... ...... ....+..
T Consensus 109 ~i~v~d~~~~~~~~~~~~~-----~~~~~~~~spdg~~l~~~~~~------~~~~i~~~~~~~~g-~~~~~~-~~~~~~~ 175 (331)
T 3u4y_A 109 NMQSYSFLKNKFISTIPIP-----YDAVGIAISPNGNGLILIDRS------SANTVRRFKIDADG-VLFDTG-QEFISGG 175 (331)
T ss_dssp EEEEEETTTTEEEEEEECC-----TTEEEEEECTTSSCEEEEEET------TTTEEEEEEECTTC-CEEEEE-EEEECSS
T ss_pred cEEEEECCCCCeEEEEECC-----CCccceEECCCCCEEEEEecC------CCceEEEEEECCCC-cEeecC-CccccCC
Confidence 7999999988766554332 1124444442 357776542 135 7888877532 221111 0011222
Q ss_pred CcccEEEEECCc-EEEEEccCCCCCCCCeEEEEECCCCCc-e-EEEcccCCCCCCCccceEEEEEeCCE-EEEEeccCCC
Q 001895 228 RYGHVMALVGQR-YLMAIGGNDGKRPLADVWALDTAAKPY-E-WRKLEPEGEGPPPCMYATASARSDGL-LLLCGGRDAS 303 (999)
Q Consensus 228 R~~h~~~v~~~~-~Lyv~GG~~g~~~~ndv~~yDl~s~~~-~-W~~v~~~~~~P~~r~~~~a~~~~~~~-LyvfGG~~~~ 303 (999)
..-+.++...++ ++|+.+..+ +.+.+||+.+... + -..+.. .. .....+...+++ +|+....
T Consensus 176 ~~~~~~~~spdg~~l~v~~~~~-----~~v~v~d~~~~~~~~~~~~~~~-~~-----~~~~~~~spdg~~l~v~~~~--- 241 (331)
T 3u4y_A 176 TRPFNITFTPDGNFAFVANLIG-----NSIGILETQNPENITLLNAVGT-NN-----LPGTIVVSRDGSTVYVLTES--- 241 (331)
T ss_dssp SSEEEEEECTTSSEEEEEETTT-----TEEEEEECSSTTSCEEEEEEEC-SS-----CCCCEEECTTSSEEEEECSS---
T ss_pred CCccceEECCCCCEEEEEeCCC-----CeEEEEECCCCcccceeeeccC-CC-----CCceEEECCCCCEEEEEEcC---
Confidence 223444444443 577765433 4799999987732 0 222221 11 111222333444 6665431
Q ss_pred CCCcccEEEEecCCCCeEEEEEC--CC--CCCCCcce-eEEEEE-C-CEEEEEcCcCCCCCCcccCCeEEEEECCCCeEE
Q 001895 304 SVPLASAYGLAKHRDGRWEWAIA--PG--VSPSPRYQ-HAAVFV-N-ARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (999)
Q Consensus 304 ~~~~~d~~~~~~~~~~~W~w~~~--~g--~~P~~R~~-hsav~~-~-~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~ 376 (999)
...++.++..+. +...... .. ..+.+... ...++. + ..||+.++. .+.+.+||+.+..=.
T Consensus 242 ---~~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~---------~~~v~v~d~~~~~~~ 308 (331)
T 3u4y_A 242 ---TVDVFNFNQLSG-TLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANI---------SRELKVFTISGKVVG 308 (331)
T ss_dssp ---EEEEEEEETTTT-EEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETT---------TTEEEEEETTSCEEE
T ss_pred ---CCEEEEEECCCC-ceeeecccccccccCCCCcccccceEECCCCCEEEEecCC---------CCcEEEEEecCCccc
Confidence 233566665543 4322221 11 11122221 223333 3 456666542 356999999887655
Q ss_pred EcccC
Q 001895 377 DTKSV 381 (999)
Q Consensus 377 ~v~~~ 381 (999)
.+...
T Consensus 309 ~~~~~ 313 (331)
T 3u4y_A 309 YVAGI 313 (331)
T ss_dssp ECTTC
T ss_pred ceecc
Confidence 54433
No 228
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=54.22 E-value=2.1e+02 Score=29.76 Aligned_cols=193 Identities=10% Similarity=0.010 Sum_probs=86.9
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
+.+++|++ +.....+... .. ..++.+.. ++++|+.... ...+++||... +.+.+..........
T Consensus 67 ~~i~~~~~-~g~~~~~~~~----~~-~~~gl~~d~dG~l~v~~~~------~~~v~~~~~~g---~~~~~~~~~~~~~~~ 131 (305)
T 3dr2_A 67 RRVLGWRE-DGTVDVLLDA----TA-FTNGNAVDAQQRLVHCEHG------RRAITRSDADG---QAHLLVGRYAGKRLN 131 (305)
T ss_dssp TEEEEEET-TSCEEEEEES----CS-CEEEEEECTTSCEEEEETT------TTEEEEECTTS---CEEEEECEETTEECS
T ss_pred CEEEEEeC-CCCEEEEeCC----CC-ccceeeECCCCCEEEEECC------CCEEEEECCCC---CEEEEEeccCCCccC
Confidence 46888888 4554444321 11 12233333 4567765321 14688898763 355443111110111
Q ss_pred cccEEEEECCcEEEEE----ccCCC--------CCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCC-EEE
Q 001895 229 YGHVMALVGQRYLMAI----GGNDG--------KRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDG-LLL 295 (999)
Q Consensus 229 ~~h~~~v~~~~~Lyv~----GG~~g--------~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~-~Ly 295 (999)
.-..+++-.++.||+. |-... ......+++||+.+. +++.+. ... .-...+...++ .||
T Consensus 132 ~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g--~~~~~~-~~~-----~p~gl~~spdg~~ly 203 (305)
T 3dr2_A 132 SPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGS--PLQRMA-DLD-----HPNGLAFSPDEQTLY 203 (305)
T ss_dssp CCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSC--CCEEEE-EES-----SEEEEEECTTSSEEE
T ss_pred CCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCC--cEEEEe-cCC-----CCcceEEcCCCCEEE
Confidence 1223445555578874 43211 112357999999877 555543 111 11112223344 577
Q ss_pred EEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEE-ECCEEEEEcCcCCCCCCcccCCeEEEEECCCCe
Q 001895 296 LCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVF-VNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (999)
Q Consensus 296 vfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~-~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~ 374 (999)
+....... .....++.|+....+ ..-...-...+... -.++++ -+++|||..+ +.|++||+....
T Consensus 204 v~~~~~~~-~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~-pdgi~~d~~G~lwv~~~-----------~gv~~~~~~g~~ 269 (305)
T 3dr2_A 204 VSQTPEQG-HGSVEITAFAWRDGA-LHDRRHFASVPDGL-PDGFCVDRGGWLWSSSG-----------TGVCVFDSDGQL 269 (305)
T ss_dssp EEECCC----CCCEEEEEEEETTE-EEEEEEEECCSSSC-CCSEEECTTSCEEECCS-----------SEEEEECTTSCE
T ss_pred EEecCCcC-CCCCEEEEEEecCCC-ccCCeEEEECCCCC-CCeEEECCCCCEEEecC-----------CcEEEECCCCCE
Confidence 76432110 012456777665432 11111100000111 112222 2567777531 248999997665
Q ss_pred EEEcc
Q 001895 375 WCDTK 379 (999)
Q Consensus 375 W~~v~ 379 (999)
-..+.
T Consensus 270 ~~~~~ 274 (305)
T 3dr2_A 270 LGHIP 274 (305)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55443
No 229
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=53.53 E-value=3.1e+02 Score=32.30 Aligned_cols=97 Identities=13% Similarity=0.139 Sum_probs=47.7
Q ss_pred EEEEEcccCCCCCCcCcEEEEecCCCCCceEEE--eecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCC
Q 001895 186 MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRV--VVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (999)
Q Consensus 186 ~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v--~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s 263 (999)
.+++.|+.+ ..+.+||+.+....+... ...| ....-.+++...++.+++.|+.++ .+..||+.+
T Consensus 396 ~~l~s~s~D------~~i~~W~~~~~~~~~~~~~~~~~~---h~~~v~~v~~s~~g~~l~sgs~Dg-----~v~vwd~~~ 461 (694)
T 3dm0_A 396 DIIVSASRD------KSIILWKLTKDDKAYGVAQRRLTG---HSHFVEDVVLSSDGQFALSGSWDG-----ELRLWDLAA 461 (694)
T ss_dssp SEEEEEETT------SEEEEEECCCSTTCSCEEEEEEEC---CSSCEEEEEECTTSSEEEEEETTS-----EEEEEETTT
T ss_pred CEEEEEeCC------CcEEEEEccCCCcccccccceecC---CCCcEEEEEECCCCCEEEEEeCCC-----cEEEEECCC
Confidence 566777642 568888887642222111 1111 111112333334446777888775 688899987
Q ss_pred CCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCC
Q 001895 264 KPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (999)
Q Consensus 264 ~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~ 302 (999)
. +-...-.... ......+...++..++.|+.++
T Consensus 462 ~--~~~~~~~~h~----~~v~~~~~s~~~~~l~s~s~D~ 494 (694)
T 3dm0_A 462 G--VSTRRFVGHT----KDVLSVAFSLDNRQIVSASRDR 494 (694)
T ss_dssp T--EEEEEEECCS----SCEEEEEECTTSSCEEEEETTS
T ss_pred C--cceeEEeCCC----CCEEEEEEeCCCCEEEEEeCCC
Confidence 6 3222111111 1111222334667777777654
No 230
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=53.05 E-value=91 Score=36.05 Aligned_cols=179 Identities=13% Similarity=0.110 Sum_probs=88.0
Q ss_pred EEEEECCCCcEEEecCCCCCCCCCcCcEEEE-eCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcc
Q 001895 152 VHCYDVLTNKWSRITPFGEPPTPRAAHVATA-VGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYG 230 (999)
Q Consensus 152 v~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~-~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~ 230 (999)
+.+||+.+.+.+.+... +. .+.+. -+++.+++++..... ...+|++|+.+.. +..+. ..+ ...
T Consensus 134 ~~l~d~~~g~~~~l~~~---~~----~~~~~spDG~~la~~~~~~~~--~~~i~~~d~~~g~--~~~l~---~~~--~~~ 197 (582)
T 3o4h_A 134 VALYALDGGGLRELARL---PG----FGFVSDIRGDLIAGLGFFGGG--RVSLFTSNLSSGG--LRVFD---SGE--GSF 197 (582)
T ss_dssp EEEEEEETTEEEEEEEE---SS----CEEEEEEETTEEEEEEEEETT--EEEEEEEETTTCC--CEEEC---CSS--CEE
T ss_pred ceEEEccCCcEEEeecC---CC----ceEEECCCCCEEEEEEEcCCC--CeEEEEEcCCCCC--ceEee---cCC--Ccc
Confidence 44678888887777543 12 22222 244444444432211 2459999988753 66553 111 111
Q ss_pred cEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEE-------EEEeCCEEEEEeccCCC
Q 001895 231 HVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATA-------SARSDGLLLLCGGRDAS 303 (999)
Q Consensus 231 h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a-------~~~~~~~LyvfGG~~~~ 303 (999)
...+.-.+++.++.+..++ ...++++|+.+. +...+..... .....+ +...++++++.+..++.
T Consensus 198 ~~~~~SpDG~~l~~~~~~~---~~~i~~~d~~~~--~~~~~~~~~~----~~~~~~~~~~~~~~~spdg~~~~~~~~~g~ 268 (582)
T 3o4h_A 198 SSASISPGMKVTAGLETAR---EARLVTVDPRDG--SVEDLELPSK----DFSSYRPTAITWLGYLPDGRLAVVARREGR 268 (582)
T ss_dssp EEEEECTTSCEEEEEECSS---CEEEEEECTTTC--CEEECCCSCS----HHHHHCCSEEEEEEECTTSCEEEEEEETTE
T ss_pred ccceECCCCCEEEEccCCC---eeEEEEEcCCCC--cEEEccCCCc----ChhhhhhccccceeEcCCCcEEEEEEcCCc
Confidence 2333333333333443333 357999999988 5553322111 011111 13446677776665432
Q ss_pred CCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEc
Q 001895 304 SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (999)
Q Consensus 304 ~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v 378 (999)
..+| .. ++. .. .+... -.++++.++++++.++.... ...++.+|..+ +...+
T Consensus 269 ----~~l~--~~---g~~--~~----~~~~~-v~~~~~sdg~~l~~~s~~~~------p~~l~~~d~~~-~~~~l 320 (582)
T 3o4h_A 269 ----SAVF--ID---GER--VE----APQGN-HGRVVLWRGKLVTSHTSLST------PPRIVSLPSGE-PLLEG 320 (582)
T ss_dssp ----EEEE--ET---TEE--EC----CCSSE-EEEEEEETTEEEEEEEETTE------EEEEEEETTCC-EEECC
T ss_pred ----EEEE--EE---CCe--ec----cCCCc-eEEEEecCCEEEEEEcCCCC------CCeEEEEcCCC-ceEEE
Confidence 2223 22 222 21 12221 22333348888877654322 35688898876 65554
No 231
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=52.98 E-value=81 Score=38.32 Aligned_cols=129 Identities=11% Similarity=0.086 Sum_probs=71.3
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcE-EEEecCCCCCceEEEeecCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDL-HVLDLTQQRPRWHRVVVQGPGPGP 227 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv-~vyD~~t~t~kW~~v~~~g~~P~~ 227 (999)
.-+++||+.+++|+........|.... .+.+.. ++.|++... +.+ ++||..+.. +........+|..
T Consensus 515 ~Gl~~~~~~~~~~~~~~~~~~l~~~~i-~~i~~d~~g~lWi~T~--------~Glv~~~d~~~~~--~~~~~~~~gl~~~ 583 (781)
T 3v9f_A 515 GGVGIYTPDMQLVRKFNQYEGFCSNTI-NQIYRSSKGQMWLATG--------EGLVCFPSARNFD--YQVFQRKEGLPNT 583 (781)
T ss_dssp SCEEEECTTCCEEEEECTTTTCSCSCE-EEEEECTTSCEEEEET--------TEEEEESCTTTCC--CEEECGGGTCSCC
T ss_pred CCEEEEeCCCCeEEEccCCCCCCCCee-EEEEECCCCCEEEEEC--------CCceEEECCCCCc--EEEccccCCCCCc
Confidence 568999999999988764322222111 122222 346666432 246 888887753 6666544345544
Q ss_pred CcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEE-EeCCEEEEEecc
Q 001895 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASA-RSDGLLLLCGGR 300 (999)
Q Consensus 228 R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~-~~~~~LyvfGG~ 300 (999)
.. .+++.-.++.||+.+ . +-+.+||+.+. ++.........+.......++. ..+|.||+ ||.
T Consensus 584 ~i-~~i~~d~~g~lW~~t-~------~Gl~~~~~~~~--~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~-g~~ 646 (781)
T 3v9f_A 584 HI-RAISEDKNGNIWAST-N------TGISCYITSKK--CFYTYDHSNNIPQGSFISGCVTKDHNGLIYF-GSI 646 (781)
T ss_dssp CC-CEEEECSSSCEEEEC-S------SCEEEEETTTT--EEEEECGGGTCCSSCEEEEEEEECTTSCEEE-EET
T ss_pred eE-EEEEECCCCCEEEEc-C------CceEEEECCCC--ceEEecccCCccccccccCceEECCCCEEEE-ECC
Confidence 43 345454455787764 2 24899999988 7777644322222222222333 34667666 553
No 232
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=52.67 E-value=2.1e+02 Score=29.43 Aligned_cols=64 Identities=9% Similarity=0.169 Sum_probs=33.2
Q ss_pred CEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEE-CC--cEEEEEccCCCCCCCCeEEEEEC
Q 001895 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV-GQ--RYLMAIGGNDGKRPLADVWALDT 261 (999)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~-~~--~~Lyv~GG~~g~~~~ndv~~yDl 261 (999)
+.+++.|+.+ ..+.+||+.+. +|..+... ......-..+.+ .+ +.+++.|+.++ .+..||+
T Consensus 67 g~~l~s~s~D------~~v~iWd~~~~--~~~~~~~~---~~h~~~v~~v~~~p~~~g~~l~s~s~d~-----~v~~wd~ 130 (297)
T 2pm7_B 67 GTILASCSYD------GKVMIWKEENG--RWSQIAVH---AVHSASVNSVQWAPHEYGPMLLVASSDG-----KVSVVEF 130 (297)
T ss_dssp CSEEEEEETT------TEEEEEEBSSS--CBCCCEEE---CCCSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEEB
T ss_pred CCEEEEEcCC------CEEEEEEcCCC--ceEEEEEe---ecCCCceeEEEeCcCCCCcEEEEEECCC-----cEEEEEe
Confidence 4566667642 56889998764 35443311 111111122222 21 24667777665 5677777
Q ss_pred CCC
Q 001895 262 AAK 264 (999)
Q Consensus 262 ~s~ 264 (999)
.+.
T Consensus 131 ~~~ 133 (297)
T 2pm7_B 131 KEN 133 (297)
T ss_dssp CSS
T ss_pred cCC
Confidence 654
No 233
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=51.94 E-value=3.5e+02 Score=31.79 Aligned_cols=184 Identities=11% Similarity=0.084 Sum_probs=84.2
Q ss_pred ccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCC
Q 001895 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (999)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~ 226 (999)
....+.++|+.+..-...-.. ....-.+++.. ++..++.|+.+ ..+.+||..... ++.... ....
T Consensus 450 ~Dg~v~vwd~~~~~~~~~~~~----h~~~v~~~~~s~~~~~l~s~s~D------~~i~iwd~~~~~-~~~~~~---~~~~ 515 (694)
T 3dm0_A 450 WDGELRLWDLAAGVSTRRFVG----HTKDVLSVAFSLDNRQIVSASRD------RTIKLWNTLGEC-KYTISE---GGEG 515 (694)
T ss_dssp TTSEEEEEETTTTEEEEEEEC----CSSCEEEEEECTTSSCEEEEETT------SCEEEECTTSCE-EEEECS---STTS
T ss_pred CCCcEEEEECCCCcceeEEeC----CCCCEEEEEEeCCCCEEEEEeCC------CEEEEEECCCCc-ceeecc---CCCC
Confidence 344788899887653322110 00111122222 34556666642 568888876531 122111 1111
Q ss_pred CCcccEEEEE-CC--cEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCC
Q 001895 227 PRYGHVMALV-GQ--RYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDAS 303 (999)
Q Consensus 227 ~R~~h~~~v~-~~--~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~ 303 (999)
.+..-.++.+ .+ ..+++.|+.++ .+..||+.+. +-...-.... ......+...++.+++.||.++.
T Consensus 516 h~~~v~~~~~~~~~~~~~l~s~s~d~-----~v~vwd~~~~--~~~~~~~~h~----~~v~~v~~spdg~~l~sg~~Dg~ 584 (694)
T 3dm0_A 516 HRDWVSCVRFSPNTLQPTIVSASWDK-----TVKVWNLSNC--KLRSTLAGHT----GYVSTVAVSPDGSLCASGGKDGV 584 (694)
T ss_dssp CSSCEEEEEECSCSSSCEEEEEETTS-----CEEEEETTTC--CEEEEECCCS----SCEEEEEECTTSSEEEEEETTSB
T ss_pred CCCcEEEEEEeCCCCcceEEEEeCCC-----eEEEEECCCC--cEEEEEcCCC----CCEEEEEEeCCCCEEEEEeCCCe
Confidence 1222222233 22 13667777665 5788898776 3222111111 11122223346788888887653
Q ss_pred CCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEE
Q 001895 304 SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (999)
Q Consensus 304 ~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~ 377 (999)
+..++..+. ....... ....-+++++..+..+++++. .+.|.+||+++.+-..
T Consensus 585 ------i~iwd~~~~---~~~~~~~---~~~~v~~~~~sp~~~~l~~~~---------~~~i~iwd~~~~~~~~ 637 (694)
T 3dm0_A 585 ------VLLWDLAEG---KKLYSLE---ANSVIHALCFSPNRYWLCAAT---------EHGIKIWDLESKSIVE 637 (694)
T ss_dssp ------CEEEETTTT---EEEECCB---CSSCEEEEEECSSSSEEEEEE---------TTEEEEEETTTTEEEE
T ss_pred ------EEEEECCCC---ceEEEec---CCCcEEEEEEcCCCcEEEEEc---------CCCEEEEECCCCCChh
Confidence 233343332 2121111 112234455554444444442 2348899998886543
No 234
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=51.91 E-value=2.5e+02 Score=30.09 Aligned_cols=146 Identities=7% Similarity=-0.042 Sum_probs=67.7
Q ss_pred CcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCC
Q 001895 201 EDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPP 280 (999)
Q Consensus 201 ~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~ 280 (999)
..+.+||+.+.. ..... ... ..-.+++.-.++++++.|+. +.+.+++..+. .......... ..
T Consensus 157 ~~i~iwd~~~~~--~~~~~-~~~----~~V~~v~fspdg~~l~s~s~------~~~~~~~~~~~--~~~~~~~~~~--~~ 219 (365)
T 4h5i_A 157 AIMRIIDPSDLT--EKFEI-ETR----GEVKDLHFSTDGKVVAYITG------SSLEVISTVTG--SCIARKTDFD--KN 219 (365)
T ss_dssp CEEEEEETTTTE--EEEEE-ECS----SCCCEEEECTTSSEEEEECS------SCEEEEETTTC--CEEEEECCCC--TT
T ss_pred CEEEEeECCCCc--EEEEe-CCC----CceEEEEEccCCceEEeccc------eeEEEEEeccC--cceeeeecCC--CC
Confidence 468899998753 22211 111 11223444444456665542 24667777766 3322111111 00
Q ss_pred ccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCc
Q 001895 281 CMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMV 359 (999)
Q Consensus 281 r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~ 359 (999)
..........++..++.++.++... ..++.++.... .+..............-.++++. ++++++.|+.+
T Consensus 220 ~~v~~v~fspdg~~l~~~s~d~~~~--~~i~~~~~~~~-~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D------ 290 (365)
T 4h5i_A 220 WSLSKINFIADDTVLIAASLKKGKG--IVLTKISIKSG-NTSVLRSKQVTNRFKGITSMDVDMKGELAVLASND------ 290 (365)
T ss_dssp EEEEEEEEEETTEEEEEEEESSSCC--EEEEEEEEETT-EEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETT------
T ss_pred CCEEEEEEcCCCCEEEEEecCCcce--eEEeecccccc-eecceeeeeecCCCCCeEeEEECCCCCceEEEcCC------
Confidence 1122233445788888887765432 22333333222 11111111000011111223332 67888888863
Q ss_pred ccCCeEEEEECCCCeE
Q 001895 360 EDSSSVAVLDTAAGVW 375 (999)
Q Consensus 360 ~~~~~v~vyD~~t~~W 375 (999)
..|.+||..+.+-
T Consensus 291 ---~~V~iwd~~~~~~ 303 (365)
T 4h5i_A 291 ---NSIALVKLKDLSM 303 (365)
T ss_dssp ---SCEEEEETTTTEE
T ss_pred ---CEEEEEECCCCcE
Confidence 3488999998764
No 235
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=51.88 E-value=1.9e+02 Score=28.70 Aligned_cols=156 Identities=12% Similarity=0.102 Sum_probs=82.5
Q ss_pred cEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeec---CCCCCCCcccEEEEE-CCcEEEEEccCCCCCCC
Q 001895 178 HVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ---GPGPGPRYGHVMALV-GQRYLMAIGGNDGKRPL 253 (999)
Q Consensus 178 hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~---g~~P~~R~~h~~~v~-~~~~Lyv~GG~~g~~~~ 253 (999)
=+++.+.+++|+|=| +-+|+++............+. ..+|. ... ++... .++++|+|-|
T Consensus 10 DAi~~~~g~~yfFkg--------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~-~ID-Aa~~~~~~~~~yfFkG------- 72 (195)
T 1itv_A 10 DAIAEIGNQLYLFKD--------GKYWRFSEGRGSRPQGPFLIADKWPALPR-KLD-SVFEEPLSKKLFFFSG------- 72 (195)
T ss_dssp SEEEEETTEEEEEET--------TEEEEECCSSSCCCEEEEEHHHHCTTSCS-SCS-EEEECTTTCCEEEEET-------
T ss_pred CEEEEeCCEEEEEEC--------CEEEEEECCccccCCCcEEhhhccCCCCC-Ccc-EEEEECCCCeEEEEeC-------
Confidence 345667889999977 357887765420012211111 13443 222 22233 2347999987
Q ss_pred CeEEEEECCCCCceE-EEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEE-----CC
Q 001895 254 ADVWALDTAAKPYEW-RKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAI-----AP 327 (999)
Q Consensus 254 ndv~~yDl~s~~~~W-~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~-----~~ 327 (999)
+..|+|+..+. .- ..+...+.+.....-.+|....++++|+|-| +..|.|+..+. +-.. +.
T Consensus 73 ~~yw~~~~~~~--~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg--------~~ywr~d~~~~---~~~~gyPr~i~ 139 (195)
T 1itv_A 73 RQVWVYTGASV--LGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG--------RRLWRFDVKAQ---MVDPRSASEVD 139 (195)
T ss_dssp TEEEEEETTEE--EEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET--------TEEEEEETTTT---EECGGGCEEHH
T ss_pred CEEEEEcCCcc--CCCEEeeecccCCCccceeEEEEcCCCeEEEEeC--------CEEEEEeCCcc---cccCCCccChh
Confidence 47888886432 21 1232222221122344455555789999966 24677776543 1000 00
Q ss_pred -CCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCe
Q 001895 328 -GVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (999)
Q Consensus 328 -g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~ 374 (999)
.-+..+..-.++...++.+|.|-| +..|.||..+..
T Consensus 140 ~~w~Gvp~~idaa~~~~g~~Yffkg-----------~~y~~~~~~~~~ 176 (195)
T 1itv_A 140 RMFPGVPLDTHDVFQFREKAYFCQD-----------RFYWRVSSRSEL 176 (195)
T ss_dssp HHSTTSCSSCSEEEEETTEEEEEET-----------TEEEEEECCTTC
T ss_pred hcCCCCCCCCCEEEEeCCeEEEEeC-----------CEEEEEECCccE
Confidence 000112234556666899999976 347888887765
No 236
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=51.60 E-value=2.3e+02 Score=29.47 Aligned_cols=129 Identities=12% Similarity=0.088 Sum_probs=64.9
Q ss_pred cEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccE
Q 001895 231 HVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASA 310 (999)
Q Consensus 231 h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~ 310 (999)
.+.+.-.++.||+.+..+ ..+++||+.+. ++..+..... ..-...+...++++|+....+.. ....+
T Consensus 48 ~~~~~~~~g~l~~~~~~~-----~~i~~~d~~~~--~~~~~~~~~~----~~~~~i~~~~dg~l~v~~~~~~~--~~~~i 114 (333)
T 2dg1_A 48 EGLNFDRQGQLFLLDVFE-----GNIFKINPETK--EIKRPFVSHK----ANPAAIKIHKDGRLFVCYLGDFK--STGGI 114 (333)
T ss_dssp EEEEECTTSCEEEEETTT-----CEEEEECTTTC--CEEEEEECSS----SSEEEEEECTTSCEEEEECTTSS--SCCEE
T ss_pred cCcEECCCCCEEEEECCC-----CEEEEEeCCCC--cEEEEeeCCC----CCcceEEECCCCcEEEEeCCCCC--CCceE
Confidence 344444455788876543 37999999887 6655432111 11222223346788887543211 12456
Q ss_pred EEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEc
Q 001895 311 YGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (999)
Q Consensus 311 ~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v 378 (999)
+.++.... ........ . .....-..+++. ++++|+........ .....|++||+.+.+...+
T Consensus 115 ~~~d~~~~-~~~~~~~~-~-~~~~~~~~i~~d~~g~l~v~~~~~~~~---~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 115 FAATENGD-NLQDIIED-L-STAYCIDDMVFDSKGGFYFTDFRGYST---NPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp EEECTTSC-SCEEEECS-S-SSCCCEEEEEECTTSCEEEEECCCBTT---BCCEEEEEECTTSCCEEEE
T ss_pred EEEeCCCC-EEEEEEcc-C-ccCCcccceEECCCCCEEEEecccccc---CCCceEEEEeCCCCEEEEe
Confidence 77766543 22211111 1 111222233332 57788764321111 1145699999988776654
No 237
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=51.53 E-value=2.5e+02 Score=29.85 Aligned_cols=133 Identities=8% Similarity=0.076 Sum_probs=64.8
Q ss_pred ceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCE
Q 001895 214 RWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGL 293 (999)
Q Consensus 214 kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~ 293 (999)
.|+.+.. |....-.++...+.+.+|++|- .+ .+++-.-.-. +|+.+......+ .....++...++.
T Consensus 26 ~W~~~~~----~~~~~~~~v~~~~~~~~~~~G~-~g-----~i~~s~DgG~--tW~~~~~~~~~~--~~~~~~i~~~~~~ 91 (327)
T 2xbg_A 26 PWEAIQL----PTTATILDMSFIDRHHGWLVGV-NA-----TLMETRDGGQ--TWEPRTLVLDHS--DYRFNSVSFQGNE 91 (327)
T ss_dssp CEEEEEC----SCSSCEEEEEESSSSCEEEEET-TT-----EEEEESSTTS--SCEECCCCCSCC--CCEEEEEEEETTE
T ss_pred CceEeec----CCCCcEEEEEECCCCcEEEEcC-CC-----eEEEeCCCCC--CCeECCCCCCCC--CccEEEEEecCCe
Confidence 5998862 3333333444444446888653 22 3544433334 899986432111 2233344455688
Q ss_pred EEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEE-ECCEEEEEcCcCCCCCCcccCCeEEEEECCC
Q 001895 294 LLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVF-VNARLHVSGGALGGGRMVEDSSSVAVLDTAA 372 (999)
Q Consensus 294 LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~-~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t 372 (999)
+|+.|.. ..++.-.+.- .+|+ ......+.+-....++. -++.+|++|.. ..+++-+-.-
T Consensus 92 ~~~~g~~-------g~i~~S~DgG-~tW~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~----------g~v~~S~DgG 151 (327)
T 2xbg_A 92 GWIVGEP-------PIMLHTTDGG-QSWS--QIPLDPKLPGSPRLIKALGNGSAEMITNV----------GAIYRTKDSG 151 (327)
T ss_dssp EEEEEET-------TEEEEESSTT-SSCE--ECCCCTTCSSCEEEEEEEETTEEEEEETT----------CCEEEESSTT
T ss_pred EEEEECC-------CeEEEECCCC-CCce--ECccccCCCCCeEEEEEECCCCEEEEeCC----------ccEEEEcCCC
Confidence 8887531 1233332222 2454 44322111111233333 46788887741 1255444345
Q ss_pred CeEEEccc
Q 001895 373 GVWCDTKS 380 (999)
Q Consensus 373 ~~W~~v~~ 380 (999)
.+|..+..
T Consensus 152 ~tW~~~~~ 159 (327)
T 2xbg_A 152 KNWQALVQ 159 (327)
T ss_dssp SSEEEEEC
T ss_pred CCCEEeec
Confidence 68998864
No 238
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=50.45 E-value=2.8e+02 Score=30.15 Aligned_cols=195 Identities=10% Similarity=0.072 Sum_probs=94.0
Q ss_pred eEEEEECCC--CcEEEecCCCCCCCCCcCcEEEEe---CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCC
Q 001895 151 DVHCYDVLT--NKWSRITPFGEPPTPRAAHVATAV---GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (999)
Q Consensus 151 dv~~yD~~t--~~W~~l~~~g~~P~pR~~hsa~~~---g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P 225 (999)
-+++|+... .+|+.+... +....-++++.. .+.||+.+..+. .-.-+++.+-... .|+.+......+
T Consensus 32 Gl~~~~~~~~g~~W~~~~~~---~~~~~v~~i~~dp~~~~~l~~g~~~g~---~g~gl~~s~D~G~--tW~~~~~~~~~~ 103 (394)
T 3b7f_A 32 GAWFLASDPARRTWELRGPV---FLGHTIHHIVQDPREPERMLMAARTGH---LGPTVFRSDDGGG--NWTEATRPPAFN 103 (394)
T ss_dssp EEEEEEECTTSCSEEEEEEE---STTSEEEEEEECSSSTTCEEEEEEC-----CCEEEEEESSTTS--CCEECSBCCCCC
T ss_pred ceEEEECCCCCCCceECCcc---CCCCceEEEEECCCCCCeEEEEecCCC---CCccEEEeCCCCC--CceECCccccCC
Confidence 467777654 689987421 122223444444 357777654211 1124666543333 499886321122
Q ss_pred CC--C-----ccc--EEEEE--C-CcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCC-------------C
Q 001895 226 GP--R-----YGH--VMALV--G-QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPP-------------P 280 (999)
Q Consensus 226 ~~--R-----~~h--~~~v~--~-~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~-------------~ 280 (999)
.. + ..+ ++++. + .+.||+.+.. .-+++.+-... +|+.+......|. .
T Consensus 104 ~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~------ggl~~S~DgG~--tW~~~~~~~~~p~~~~~~~~~~~g~~~ 175 (394)
T 3b7f_A 104 KAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSP------QGLFRSTDHGA--SWEPVAGFNDHPMRRAWTGGEQDGTPD 175 (394)
T ss_dssp CCC----CCCCCEEEEEEECCTTSTTCEEEEEET------TEEEEESSTTS--BCEECHHHHTCTTHHHHHCCC----CC
T ss_pred CcccccccccccceeEEEeCCCCCCCEEEEEecC------CcEEEEcCCCC--CeEECcCccCCccccccccccccCCCC
Confidence 11 1 112 23332 1 3467775421 35788877667 8998853211110 0
Q ss_pred ccceEEEEEe---CCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCC---CCCC-----CcceeEEEEEC---CEE
Q 001895 281 CMYATASARS---DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPG---VSPS-----PRYQHAAVFVN---ARL 346 (999)
Q Consensus 281 r~~~~a~~~~---~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g---~~P~-----~R~~hsav~~~---~~L 346 (999)
.....++.+. .+.||+.... ..++...+... +|+-..... ..|. ....+++++.. +.|
T Consensus 176 ~~~i~~i~~d~~~~~~l~vg~~~-------ggl~~s~DgG~-tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l 247 (394)
T 3b7f_A 176 GPKMHSILVDPRDPKHLYIGMSS-------GGVFESTDAGT-DWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDIL 247 (394)
T ss_dssp CCEEEEEEECTTCTTCEEEEEET-------BEEEEESSTTS-SCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEE
T ss_pred CCceeEEEECCCCCCEEEEEECC-------CCEEEECCCCC-CceECCCCccccccCCCccccCcceeEEEECCCCCCEE
Confidence 1112233332 3577775432 13555544443 554332110 1121 12234444442 667
Q ss_pred EEEcCcCCCCCCcccCCeEEEEECCCCeEEEccc
Q 001895 347 HVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKS 380 (999)
Q Consensus 347 ~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~ 380 (999)
|+.. ...|++++-...+|..+..
T Consensus 248 ~vg~-----------~~gl~~s~D~G~tW~~~~~ 270 (394)
T 3b7f_A 248 YQQN-----------HCGIYRMDRREGVWKRIGD 270 (394)
T ss_dssp EEEE-----------TTEEEEEETTTTEEECGGG
T ss_pred EEEc-----------CCeEEEeCCCCCcceECCC
Confidence 7742 1348889888999998864
No 239
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=50.19 E-value=2.1e+02 Score=28.78 Aligned_cols=180 Identities=7% Similarity=-0.030 Sum_probs=91.6
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
+.+++||+. .++..+.... ....-++++.. ++.+|+.... ...+++||... +........ ...
T Consensus 83 ~~v~~~d~~-g~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~g---~~~~~~~~~---~~~ 146 (300)
T 2qc5_A 83 NKIGKLSKK-GGFTEYPLPQ---PDSGPYGITEGLNGDIWFTQLN------GDRIGKLTADG---TIYEYDLPN---KGS 146 (300)
T ss_dssp TEEEEECTT-SCEEEEECSS---TTCCEEEEEECSTTCEEEEETT------TTEEEEECTTS---CEEEEECSS---TTC
T ss_pred CeEEEECCC-CCeEEecCCC---CCCCCccceECCCCCEEEEccC------CCeEEEECCCC---CEEEccCCC---CCC
Confidence 368889988 6666554321 11223444444 4577776532 24688999873 244433111 122
Q ss_pred cccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEE-eCCEEEEEeccCCCCCCc
Q 001895 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASAR-SDGLLLLCGGRDASSVPL 307 (999)
Q Consensus 229 ~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~-~~~~LyvfGG~~~~~~~~ 307 (999)
.-++++...++.||+.... ...+++||+ +. ++..+..... ...-.++.. .++.||+.... .
T Consensus 147 ~~~~i~~d~~g~l~v~~~~-----~~~i~~~~~-~g--~~~~~~~~~~----~~~~~~i~~d~~g~l~v~~~~------~ 208 (300)
T 2qc5_A 147 YPAFITLGSDNALWFTENQ-----NNSIGRITN-TG--KLEEYPLPTN----AAAPVGITSGNDGALWFVEIM------G 208 (300)
T ss_dssp CEEEEEECTTSSEEEEETT-----TTEEEEECT-TC--CEEEEECSST----TCCEEEEEECTTSSEEEEETT------T
T ss_pred CceeEEECCCCCEEEEecC-----CCeEEEECC-CC--cEEEeeCCCC----CCCcceEEECCCCCEEEEccC------C
Confidence 3344545444468876432 246899999 55 4544322111 112222333 35788886432 2
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEc
Q 001895 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (999)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v 378 (999)
..++.++. ++.+.....+.. ...-.++++- +++|||.... .+.|.+||+ +.+....
T Consensus 209 ~~i~~~~~--~g~~~~~~~~~~---~~~~~~i~~d~~g~l~v~~~~---------~~~i~~~~~-~g~~~~~ 265 (300)
T 2qc5_A 209 NKIGRITT--TGEISEYDIPTP---NARPHAITAGKNSEIWFTEWG---------ANQIGRITN-DNTIQEY 265 (300)
T ss_dssp TEEEEECT--TCCEEEEECSST---TCCEEEEEECSTTCEEEEETT---------TTEEEEECT-TSCEEEE
T ss_pred CEEEEEcC--CCcEEEEECCCC---CCCceEEEECCCCCEEEeccC---------CCeEEEECC-CCcEEEE
Confidence 24667766 345554433211 1112233333 4678887521 356889998 5666544
No 240
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=50.02 E-value=2.3e+02 Score=29.16 Aligned_cols=165 Identities=13% Similarity=0.196 Sum_probs=82.4
Q ss_pred EEEEECCCC-cEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcc
Q 001895 152 VHCYDVLTN-KWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYG 230 (999)
Q Consensus 152 v~~yD~~t~-~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~ 230 (999)
+++||.... .|..... ... ..+.++.++.||+... ...+++||.. ....|.... +.. ..
T Consensus 80 l~~~d~~g~~~~~~~~~-----~~~-~~~~~~~~~~l~v~t~-------~~~l~~~d~~-g~~~~~~~~-----~~~-~~ 139 (330)
T 3hxj_A 80 VYAINPDGTEKWRFDTK-----KAI-VSDFTIFEDILYVTSM-------DGHLYAINTD-GTEKWRFKT-----KKA-IY 139 (330)
T ss_dssp EEEECCCGGGGGGSCC-----------CCEEEETTEEEEECT-------TSEEEEECTT-SCEEEEEEC-----SSC-CC
T ss_pred EEEECCCCcEEEEEECC-----CCc-ccCceEECCEEEEEec-------CCEEEEEcCC-CCEEEEEcC-----CCc-ee
Confidence 888886422 2432211 111 1223334778877532 1468999988 434677653 111 12
Q ss_pred cEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccE
Q 001895 231 HVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASA 310 (999)
Q Consensus 231 h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~ 310 (999)
.+.+...++.||+.. .+ ..+++||.. ....|....... .....+...++.||+.. ..+
T Consensus 140 ~~~~~~~~g~l~vgt-~~-----~~l~~~d~~-g~~~~~~~~~~~------~~~~~~~d~~g~l~v~t---------~~l 197 (330)
T 3hxj_A 140 ATPIVSEDGTIYVGS-ND-----NYLYAINPD-GTEKWRFKTNDA------ITSAASIGKDGTIYFGS---------DKV 197 (330)
T ss_dssp SCCEECTTSCEEEEC-TT-----SEEEEECTT-SCEEEEEECSSC------CCSCCEECTTCCEEEES---------SSE
T ss_pred eeeEEcCCCEEEEEc-CC-----CEEEEECCC-CCEeEEEecCCC------ceeeeEEcCCCEEEEEe---------CEE
Confidence 233444344677632 22 468999998 545687643211 11122222467777753 346
Q ss_pred EEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCe
Q 001895 311 YGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (999)
Q Consensus 311 ~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~ 374 (999)
+.++. +++-.|....+. ....+.+.. ++.||+..- ...+++||+....
T Consensus 198 ~~~d~--~g~~~~~~~~~~----~~~~~~~~~~~g~l~v~t~----------~~gl~~~~~~g~~ 246 (330)
T 3hxj_A 198 YAINP--DGTEKWNFYAGY----WTVTRPAISEDGTIYVTSL----------DGHLYAINPDGTE 246 (330)
T ss_dssp EEECT--TSCEEEEECCSS----CCCSCCEECTTSCEEEEET----------TTEEEEECTTSCE
T ss_pred EEECC--CCcEEEEEccCC----cceeceEECCCCeEEEEcC----------CCeEEEECCCCCE
Confidence 77773 344455544321 111223333 457777531 2348888875544
No 241
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=49.81 E-value=84 Score=31.39 Aligned_cols=103 Identities=10% Similarity=0.101 Sum_probs=54.2
Q ss_pred CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecC--CCCC--CCcccEEEEECCcEEEEEccCCCCCCCCeEEEE
Q 001895 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG--PGPG--PRYGHVMALVGQRYLMAIGGNDGKRPLADVWAL 259 (999)
Q Consensus 184 g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g--~~P~--~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~y 259 (999)
++++|+|-| +.+|+|+..+. ....... .+|. .....+.. ..++++|+|-| +..|+|
T Consensus 64 ~~~~yfFkG--------~~yw~~~~~~~----~~Pk~i~~~G~p~~~~~iDAA~~-~~~g~~yfFkg-------~~ywr~ 123 (195)
T 1itv_A 64 SKKLFFFSG--------RQVWVYTGASV----LGPRRLDKLGLGADVAQVTGALR-SGRGKMLLFSG-------RRLWRF 123 (195)
T ss_dssp TCCEEEEET--------TEEEEEETTEE----EEEEEGGGGTCCTTCCCCCEEEE-CSTTEEEEEET-------TEEEEE
T ss_pred CCeEEEEeC--------CEEEEEcCCcc----CCCEEeeecccCCCccceeEEEE-cCCCeEEEEeC-------CEEEEE
Confidence 568999988 47888885431 1111111 2333 13333333 44458999976 478999
Q ss_pred ECCCCCce--E-EEcc-cCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCC
Q 001895 260 DTAAKPYE--W-RKLE-PEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHR 317 (999)
Q Consensus 260 Dl~s~~~~--W-~~v~-~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~ 317 (999)
|..+.++. . ..+. .-...| .... |+...++.+|+|-|. ..|.|+..+
T Consensus 124 d~~~~~~~~gyPr~i~~~w~Gvp--~~id-aa~~~~g~~Yffkg~--------~y~~~~~~~ 174 (195)
T 1itv_A 124 DVKAQMVDPRSASEVDRMFPGVP--LDTH-DVFQFREKAYFCQDR--------FYWRVSSRS 174 (195)
T ss_dssp ETTTTEECGGGCEEHHHHSTTSC--SSCS-EEEEETTEEEEEETT--------EEEEEECCT
T ss_pred eCCcccccCCCccChhhcCCCCC--CCCC-EEEEeCCeEEEEeCC--------EEEEEECCc
Confidence 98765110 0 0111 111111 1223 333446999999763 356665543
No 242
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=48.38 E-value=64 Score=33.09 Aligned_cols=109 Identities=9% Similarity=0.006 Sum_probs=57.0
Q ss_pred eCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEe---e-c---CCCCCC----CcccEEEEECCcEEEEEccCCCCC
Q 001895 183 VGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVV---V-Q---GPGPGP----RYGHVMALVGQRYLMAIGGNDGKR 251 (999)
Q Consensus 183 ~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~---~-~---g~~P~~----R~~h~~~v~~~~~Lyv~GG~~g~~ 251 (999)
..+++|+|=| +.+|+||..+.+....... . . ..+|.. ....+...-.++++|+|-|
T Consensus 69 ~~g~~~fFkg--------~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG----- 135 (225)
T 3oyo_A 69 EASEAYVFSG--------NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKG----- 135 (225)
T ss_dssp STTEEEEEET--------TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEET-----
T ss_pred CCCeEEEEcC--------CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeC-----
Confidence 4689999987 4789998754321122111 0 0 123321 2222222123458999987
Q ss_pred CCCeEEEEECCCCCceE--EEcccCCCCCC------CccceEEEEE-eCCEEEEEeccCCCCCCcccEEEEecC
Q 001895 252 PLADVWALDTAAKPYEW--RKLEPEGEGPP------PCMYATASAR-SDGLLLLCGGRDASSVPLASAYGLAKH 316 (999)
Q Consensus 252 ~~ndv~~yDl~s~~~~W--~~v~~~~~~P~------~r~~~~a~~~-~~~~LyvfGG~~~~~~~~~d~~~~~~~ 316 (999)
+..|+||.....+.. ..+.. ..|. +....+|... .++++|+|-|. ..|.|+..
T Consensus 136 --~~yw~~d~~~~~~~~gPk~I~~--~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG~--------~ywr~d~~ 197 (225)
T 3oyo_A 136 --NKYVRIAYDSKQLVGNIRNIGD--GFPVLNGTEFESGIDACFASHKEPEAYLFKGQ--------NYVRIDFT 197 (225)
T ss_dssp --TEEEEEETTTTEEEEEEEEHHH--HCGGGTTSTTTTCCSEEEECSSTTEEEEEETT--------EEEEEECC
T ss_pred --CeEEEEECCCCeecCCCcchhh--cCCCcccccCCCCcCEEEEeCCCCEEEEEECC--------EEEEEeCC
Confidence 478999987762222 11111 1111 2233444443 57999999763 45666654
No 243
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=48.13 E-value=3e+02 Score=29.92 Aligned_cols=103 Identities=10% Similarity=-0.053 Sum_probs=51.6
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEE-eCCEEEEEcccCC---CCCCcCcEEEEecCCCCCceEEEeecCC-CC
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATA-VGTMVVIQGGIGP---AGLSAEDLHVLDLTQQRPRWHRVVVQGP-GP 225 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~-~g~~iyv~GG~~~---~~~~~~dv~vyD~~t~t~kW~~v~~~g~-~P 225 (999)
.+++||+.+++-...- |.....|-+.. .+..+|+..-... .+...+.+.+||+.+.+ ....++..+. .+
T Consensus 48 ~v~v~D~~t~~~~~~i-----~~g~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~-~~~~i~~~~~~~~ 121 (373)
T 2mad_H 48 QQWVLDAGSGSILGHV-----NGGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL-PIADIELPDAPRF 121 (373)
T ss_pred EEEEEECCCCeEEEEe-----cCCCCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCc-EEEEEECCCcccc
Confidence 7899999987643322 22222222222 2458888753211 11234678899998753 2333332100 00
Q ss_pred -CCCcccEEEEE-CCcEEEEEccCCCCCCCCeEEEEECCCC
Q 001895 226 -GPRYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 226 -~~R~~h~~~v~-~~~~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
....-+.+++- ++++||+..-. ..+.++++| .+.
T Consensus 122 ~~g~~p~~~~~spDG~~l~v~n~~----~~~~v~viD-~t~ 157 (373)
T 2mad_H 122 DVGPYSWMNANTPNNADLLFFQFA----AGPAVGLVV-QGG 157 (373)
T ss_pred ccCCCccceEECCCCCEEEEEecC----CCCeEEEEE-CCC
Confidence 01112233333 44477776321 135799999 877
No 244
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=47.24 E-value=2.6e+02 Score=29.00 Aligned_cols=69 Identities=12% Similarity=0.261 Sum_probs=35.8
Q ss_pred CEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCc-ccEEEEECC--cEEEEEccCCCCCCCCeEEEEEC
Q 001895 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY-GHVMALVGQ--RYLMAIGGNDGKRPLADVWALDT 261 (999)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~-~h~~~v~~~--~~Lyv~GG~~g~~~~ndv~~yDl 261 (999)
+.+++.|+. ...+.+||+.+. +|..+... ..... -.+++...+ +.+++.|+.++ .+..||+
T Consensus 71 ~~~l~s~s~------D~~v~iWd~~~~--~~~~~~~~---~~h~~~V~~v~~~p~~~g~~lasgs~D~-----~i~lwd~ 134 (316)
T 3bg1_A 71 GNILASCSY------DRKVIIWREENG--TWEKSHEH---AGHDSSVNSVCWAPHDYGLILACGSSDG-----AISLLTY 134 (316)
T ss_dssp SSCEEEEET------TSCEEEECCSSS--CCCEEEEE---CCCSSCCCEEEECCTTTCSCEEEECSSS-----CEEEEEE
T ss_pred CCEEEEEEC------CCEEEEEECCCC--cceEEEEc---cCCCCceEEEEECCCCCCcEEEEEcCCC-----CEEEEec
Confidence 456666664 256889998874 35444321 11111 122323222 35777787765 4566676
Q ss_pred CCCCceEEE
Q 001895 262 AAKPYEWRK 270 (999)
Q Consensus 262 ~s~~~~W~~ 270 (999)
.+.. .|..
T Consensus 135 ~~~~-~~~~ 142 (316)
T 3bg1_A 135 TGEG-QWEV 142 (316)
T ss_dssp CSSS-CEEE
T ss_pred CCCC-Ccce
Confidence 5531 4654
No 245
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=47.23 E-value=2.4e+02 Score=28.58 Aligned_cols=94 Identities=20% Similarity=0.185 Sum_probs=44.0
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCc
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~ 229 (999)
..+.++|+.+++-...... ...........+.+++.|+.. ..+..++..... .......+ ....
T Consensus 89 g~v~iw~~~~~~~~~~~~~-----h~~~~~~~~~~~~~l~s~~~~------~~~~~~~~~~~~--~~~~~~~~---~~~~ 152 (318)
T 4ggc_A 89 AEVQLWDVQQQKRLRNMTS-----HSARVGSLSWNSYILSSGSRS------GHIHHHDVRVAE--HHVATLSG---HSQE 152 (318)
T ss_dssp SEEEEEETTTTEEEEEEEC-----CSSCEEEEEEETTEEEEEETT------SEEEEEETTSSS--CEEEEEEC---CSSC
T ss_pred CcEEEeecCCceeEEEecC-----ccceEEEeecCCCEEEEEecC------CceEeeecCCCc--eeEEEEcC---ccCc
Confidence 4678889888764333221 111222333344555555532 345566665532 11111111 1111
Q ss_pred ccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCC
Q 001895 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 230 ~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
.........+.+++.|+.++ .+..||+.+.
T Consensus 153 ~~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~ 182 (318)
T 4ggc_A 153 VCGLRWAPDGRHLASGGNDN-----LVNVWPSAPG 182 (318)
T ss_dssp EEEEEECTTSSEEEEEETTS-----CEEEEESSCB
T ss_pred eEEEEEcCCCCEEEEEecCc-----ceeEEECCCC
Confidence 22222333335666777665 4677888664
No 246
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=46.98 E-value=56 Score=34.51 Aligned_cols=59 Identities=10% Similarity=0.236 Sum_probs=30.5
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-C--CEEEEEcccCCCCCCcCcEEEEecCCCCCceEE
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-G--TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHR 217 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g--~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~ 217 (999)
..+.++|+.+..|..+..... ....-.+++.. + +.+++.|+.+ ..+.+||+.+.. .|..
T Consensus 81 ~~v~iWd~~~~~~~~~~~~~~--h~~~V~~v~~~p~~~g~~lasgs~D------~~i~lwd~~~~~-~~~~ 142 (316)
T 3bg1_A 81 RKVIIWREENGTWEKSHEHAG--HDSSVNSVCWAPHDYGLILACGSSD------GAISLLTYTGEG-QWEV 142 (316)
T ss_dssp SCEEEECCSSSCCCEEEEECC--CSSCCCEEEECCTTTCSCEEEECSS------SCEEEEEECSSS-CEEE
T ss_pred CEEEEEECCCCcceEEEEccC--CCCceEEEEECCCCCCcEEEEEcCC------CCEEEEecCCCC-Ccce
Confidence 467888888876654432210 00111122222 2 4566666642 468888887641 4643
No 247
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=46.84 E-value=1.1e+02 Score=30.96 Aligned_cols=106 Identities=11% Similarity=0.154 Sum_probs=54.6
Q ss_pred CCEEEEEcccCCCCCCcCcEEEEecCCCCCce-EEEeecCCCCCC--CcccEEEEECCcEEEEEccCCCCCCCCeEEEEE
Q 001895 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRW-HRVVVQGPGPGP--RYGHVMALVGQRYLMAIGGNDGKRPLADVWALD 260 (999)
Q Consensus 184 g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW-~~v~~~g~~P~~--R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yD 260 (999)
++++|+|=| +.+|+|+-.+....+ ..+... .+|.. ....+...-.++++|+|-| +..|+||
T Consensus 79 ~~~iyfFkG--------~~~w~~~~~~~~~gyPk~I~~~-GlP~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d 142 (207)
T 1pex_A 79 HDLIFIFRG--------RKFWALNGYDILEGYPKKISEL-GLPKEVKKISAAVHFEDTGKTLLFSG-------NQVWRYD 142 (207)
T ss_dssp TTEEEEEET--------TEEEEESTTCCCTTCSEESTTT-TCCTTCCCCCEEEECTTTSEEEEEET-------TEEEEEE
T ss_pred CCcEEEEcc--------CEEEEEeCCeeccCCceecccc-CCCCCCccccEEEEeCCCCEEEEEeC-------CEEEEEe
Confidence 479999987 468888743321111 122111 13431 2333332223358999987 4789999
Q ss_pred CCCCCceEE-----Ecc-cCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCC
Q 001895 261 TAAKPYEWR-----KLE-PEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRD 318 (999)
Q Consensus 261 l~s~~~~W~-----~v~-~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~ 318 (999)
..+. +=. .+. .-...| .... |+...++++|+|-|. ..|.|+..+.
T Consensus 143 ~~~~--~~d~gyPr~i~~~~~Gip--~~iD-aAf~~~g~~YfFkg~--------~y~rf~~~~~ 193 (207)
T 1pex_A 143 DTNH--IMDKDYPRLIEEDFPGIG--DKVD-AVYEKNGYIYFFNGP--------IQFEYSIWSN 193 (207)
T ss_dssp TTTT--EECSSCCCBHHHHSTTSC--SCCS-EEEEETTEEEEEETT--------EEEEEETTTT
T ss_pred CcCc--cccCCCCccHHHcCCCCC--CCcc-EEEEcCCcEEEEECC--------EEEEEeCCcc
Confidence 8765 211 000 001111 1233 333458999999663 4566666543
No 248
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=46.55 E-value=2.5e+02 Score=28.60 Aligned_cols=149 Identities=9% Similarity=0.051 Sum_probs=72.1
Q ss_pred CcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECC-cEEEEEccCCCCCCCCeEEEEECCCCCceEEEc-ccCCCCC
Q 001895 201 EDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQ-RYLMAIGGNDGKRPLADVWALDTAAKPYEWRKL-EPEGEGP 278 (999)
Q Consensus 201 ~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~-~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v-~~~~~~P 278 (999)
..+++||+.+. ++..+...........-++++...+ +.||+.... +.+++||+. . +...+ .......
T Consensus 46 ~~i~~~d~~~g--~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~------~~l~~~d~~-g--~~~~~~~~~~~~~ 114 (314)
T 1pjx_A 46 GEILRIDLKTG--KKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR------LGLLVVQTD-G--TFEEIAKKDSEGR 114 (314)
T ss_dssp CEEEEECTTTC--CEEEEECCEETTEECCEEEEEECSSSSEEEEEETT------TEEEEEETT-S--CEEECCSBCTTSC
T ss_pred CEEEEEeCCCC--cEEEEEecccCCCCCCCceEEEecCCCcEEEEECC------CCEEEEeCC-C--CEEEEEeccCCCc
Confidence 46999998765 3665531000001112234444444 578887642 269999998 6 55555 3221110
Q ss_pred CCccceEEEEEeCCEEEEEeccCC---------CCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-----CC
Q 001895 279 PPCMYATASARSDGLLLLCGGRDA---------SSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-----NA 344 (999)
Q Consensus 279 ~~r~~~~a~~~~~~~LyvfGG~~~---------~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-----~~ 344 (999)
....-...+.-.++++|+...... .......++.++.. ++........ ......++. ++
T Consensus 115 ~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--g~~~~~~~~~-----~~~~~i~~~~~~d~dg 187 (314)
T 1pjx_A 115 RMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD--GQMIQVDTAF-----QFPNGIAVRHMNDGRP 187 (314)
T ss_dssp BCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT--SCEEEEEEEE-----SSEEEEEEEECTTSCE
T ss_pred cccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC--CCEEEeccCC-----CCcceEEEecccCCCC
Confidence 001122233334678888654321 11122467777654 3333221110 111333444 33
Q ss_pred -EEEEEcCcCCCCCCcccCCeEEEEECC-CCeEE
Q 001895 345 -RLHVSGGALGGGRMVEDSSSVAVLDTA-AGVWC 376 (999)
Q Consensus 345 -~L~V~GG~~~~~~~~~~~~~v~vyD~~-t~~W~ 376 (999)
.|||.... .+.|++||+. ++++.
T Consensus 188 ~~l~v~~~~---------~~~i~~~~~~~~g~~~ 212 (314)
T 1pjx_A 188 YQLIVAETP---------TKKLWSYDIKGPAKIE 212 (314)
T ss_dssp EEEEEEETT---------TTEEEEEEEEETTEEE
T ss_pred CEEEEEECC---------CCeEEEEECCCCCccc
Confidence 57776432 3468899876 45443
No 249
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=45.93 E-value=2.5e+02 Score=28.28 Aligned_cols=180 Identities=9% Similarity=-0.040 Sum_probs=90.7
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
+.+.+||+. .++..+.... ....-++++.. ++.+|+.... ...+++||.. . ++....... ...
T Consensus 41 ~~v~~~~~~-~~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~------~~~v~~~d~~-g--~~~~~~~~~---~~~ 104 (300)
T 2qc5_A 41 NKISSLDQS-GRIKEFEVPT---PDAKVMCLIVSSLGDIWFTENG------ANKIGKLSKK-G--GFTEYPLPQ---PDS 104 (300)
T ss_dssp TEEEEECTT-SCEEEEECSS---TTCCEEEEEECTTSCEEEEETT------TTEEEEECTT-S--CEEEEECSS---TTC
T ss_pred CeEEEECCC-CceEEEECCC---CCCcceeEEECCCCCEEEEecC------CCeEEEECCC-C--CeEEecCCC---CCC
Confidence 367888888 6666653211 11122344443 3577776432 2468999987 3 355443211 123
Q ss_pred cccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEE-eCCEEEEEeccCCCCCCc
Q 001895 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASAR-SDGLLLLCGGRDASSVPL 307 (999)
Q Consensus 229 ~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~-~~~~LyvfGG~~~~~~~~ 307 (999)
.-+++++..++.+|+....+ +.+++||+. . +......... ...-.+... .++++|+.... .
T Consensus 105 ~~~~i~~~~~g~l~v~~~~~-----~~i~~~~~~-g--~~~~~~~~~~----~~~~~~i~~d~~g~l~v~~~~------~ 166 (300)
T 2qc5_A 105 GPYGITEGLNGDIWFTQLNG-----DRIGKLTAD-G--TIYEYDLPNK----GSYPAFITLGSDNALWFTENQ------N 166 (300)
T ss_dssp CEEEEEECSTTCEEEEETTT-----TEEEEECTT-S--CEEEEECSST----TCCEEEEEECTTSSEEEEETT------T
T ss_pred CCccceECCCCCEEEEccCC-----CeEEEECCC-C--CEEEccCCCC----CCCceeEEECCCCCEEEEecC------C
Confidence 33455554445788765322 368899987 5 3433321111 111222222 45778876421 2
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEc
Q 001895 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (999)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v 378 (999)
..++.++. ++++.....+.. ...-.++++- ++.|||.... .+.|++||+ ++++..+
T Consensus 167 ~~i~~~~~--~g~~~~~~~~~~---~~~~~~i~~d~~g~l~v~~~~---------~~~i~~~~~-~g~~~~~ 223 (300)
T 2qc5_A 167 NSIGRITN--TGKLEEYPLPTN---AAAPVGITSGNDGALWFVEIM---------GNKIGRITT-TGEISEY 223 (300)
T ss_dssp TEEEEECT--TCCEEEEECSST---TCCEEEEEECTTSSEEEEETT---------TTEEEEECT-TCCEEEE
T ss_pred CeEEEECC--CCcEEEeeCCCC---CCCcceEEECCCCCEEEEccC---------CCEEEEEcC-CCcEEEE
Confidence 34667766 334443332211 1122233333 5678886421 345899998 6666654
No 250
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=45.89 E-value=2.7e+02 Score=28.68 Aligned_cols=73 Identities=10% Similarity=0.101 Sum_probs=38.3
Q ss_pred CEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcE-EEEEccCCCCCCCCeEEEEEC-C
Q 001895 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRY-LMAIGGNDGKRPLADVWALDT-A 262 (999)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~-Lyv~GG~~g~~~~ndv~~yDl-~ 262 (999)
+.+++.|+. ...+.+||+.+........... .....-.+++...++. +++.|+.++ .+..||+ .
T Consensus 23 ~~~l~~~~~------d~~v~iw~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~~wd~~~ 88 (342)
T 1yfq_A 23 KSLLLITSW------DGSLTVYKFDIQAKNVDLLQSL---RYKHPLLCCNFIDNTDLQIYVGTVQG-----EILKVDLIG 88 (342)
T ss_dssp GTEEEEEET------TSEEEEEEEETTTTEEEEEEEE---ECSSCEEEEEEEESSSEEEEEEETTS-----CEEEECSSS
T ss_pred CCEEEEEcC------CCeEEEEEeCCCCccccceeee---ecCCceEEEEECCCCCcEEEEEcCCC-----eEEEEEecc
Confidence 345555553 2578899988753111111111 1112223333443346 777777665 6889999 8
Q ss_pred CCCceEEEccc
Q 001895 263 AKPYEWRKLEP 273 (999)
Q Consensus 263 s~~~~W~~v~~ 273 (999)
+. +...+..
T Consensus 89 ~~--~~~~~~~ 97 (342)
T 1yfq_A 89 SP--SFQALTN 97 (342)
T ss_dssp SS--SEEECBS
T ss_pred CC--ceEeccc
Confidence 77 5555443
No 251
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=45.44 E-value=2.8e+02 Score=28.73 Aligned_cols=144 Identities=13% Similarity=0.014 Sum_probs=68.1
Q ss_pred CcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECC----cEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCC
Q 001895 201 EDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQ----RYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGE 276 (999)
Q Consensus 201 ~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~----~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~ 276 (999)
+.+.+||+.+.. ....+...........-.+++...+ +.+++.|+.++ .+..||+.+....... ....
T Consensus 44 ~~v~vw~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg-----~i~v~d~~~~~~~~~~-~~~~- 115 (366)
T 3k26_A 44 NRVTLYECHSQG-EIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRG-----IIRIINPITMQCIKHY-VGHG- 115 (366)
T ss_dssp TEEEEEEECGGG-CEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTC-----EEEEECTTTCCEEEEE-ESCC-
T ss_pred CEEEEEEcCCCc-EEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCC-----EEEEEEchhceEeeee-cCCC-
Confidence 358888887642 2233321111111122222223222 36788888765 6888998876322222 1111
Q ss_pred CCCCccceEEEEE-e-CCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcC
Q 001895 277 GPPPCMYATASAR-S-DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGAL 353 (999)
Q Consensus 277 ~P~~r~~~~a~~~-~-~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~ 353 (999)
..-.++.. . ++.+++.|+.++. +..++.... +...... ........-.++++. ++..++.|+.+
T Consensus 116 -----~~i~~~~~~~~~~~~l~s~~~dg~------i~iwd~~~~-~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d 182 (366)
T 3k26_A 116 -----NAINELKFHPRDPNLLLSVSKDHA------LRLWNIQTD-TLVAIFG-GVEGHRDEVLSADYDLLGEKIMSCGMD 182 (366)
T ss_dssp -----SCEEEEEECSSCTTEEEEEETTSC------EEEEETTTT-EEEEEEC-STTSCSSCEEEEEECTTSSEEEEEETT
T ss_pred -----CcEEEEEECCCCCCEEEEEeCCCe------EEEEEeecC-eEEEEec-ccccccCceeEEEECCCCCEEEEecCC
Confidence 11222222 2 6677788876542 444444433 2222211 101122222333333 46677777753
Q ss_pred CCCCCcccCCeEEEEECCCCe
Q 001895 354 GGGRMVEDSSSVAVLDTAAGV 374 (999)
Q Consensus 354 ~~~~~~~~~~~v~vyD~~t~~ 374 (999)
..|.+||+.+.+
T Consensus 183 ---------g~i~i~d~~~~~ 194 (366)
T 3k26_A 183 ---------HSLKLWRINSKR 194 (366)
T ss_dssp ---------SCEEEEESCSHH
T ss_pred ---------CCEEEEECCCCc
Confidence 348889988764
No 252
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=45.21 E-value=22 Score=37.42 Aligned_cols=66 Identities=12% Similarity=0.038 Sum_probs=43.3
Q ss_pred CeEEEecCCCCH--HHHHHHHHHhCCCCCCCCccceeEEE-eccccCCCCChHHHHHHHHHhhhcCCCCEEEecCCcccc
Q 001895 699 PIKIFGDLHGQF--GDLMRLFDEYGSPSTAGDIAYIDYLF-LGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAA 775 (999)
Q Consensus 699 ~i~vvGDiHG~~--~~L~~il~~~g~~~~~~~~~~~~~vf-LGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~ 775 (999)
+|..+|||=|.- ..+..+|..+.... + -+|+ -||....-..+.+...+|..+.. .+. ..||||.-
T Consensus 2 ~ilfiGDi~g~~G~~~v~~~l~~lr~~~-d------~vi~ngen~~~G~g~~~~~~~~l~~~G~----D~~-T~GNHefD 69 (252)
T 2z06_A 2 RVLFIGDVMAEPGLRAVGLHLPDIRDRY-D------LVIANGENAARGKGLDRRSYRLLREAGV----DLV-SLGNHAWD 69 (252)
T ss_dssp EEEEECCBCHHHHHHHHHHHHHHHGGGC-S------EEEEECTTTTTTSSCCHHHHHHHHHHTC----CEE-ECCTTTTS
T ss_pred EEEEEEecCCcccHHHHHHHHHHHHhhC-C------EEEEeCCCccCCCCcCHHHHHHHHhCCC----CEE-EeccEeeE
Confidence 588999996654 56677777664322 1 3444 66666544467888888888754 344 55999985
Q ss_pred c
Q 001895 776 D 776 (999)
Q Consensus 776 ~ 776 (999)
.
T Consensus 70 ~ 70 (252)
T 2z06_A 70 H 70 (252)
T ss_dssp C
T ss_pred C
Confidence 4
No 253
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=44.81 E-value=1.4e+02 Score=32.99 Aligned_cols=21 Identities=0% Similarity=-0.013 Sum_probs=14.3
Q ss_pred cEEEEEccCCCCCCCCeEEEEECCCC
Q 001895 239 RYLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 239 ~~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
+..++.|+.++ .+..||+.+.
T Consensus 308 g~~l~s~~~D~-----~i~iwd~~~~ 328 (435)
T 4e54_B 308 GARLLTTDQKS-----EIRVYSASQW 328 (435)
T ss_dssp SSEEEEEESSS-----CEEEEESSSS
T ss_pred CCeeEEEcCCC-----EEEEEECCCC
Confidence 35667777765 5778888664
No 254
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=44.75 E-value=2.6e+02 Score=28.23 Aligned_cols=178 Identities=7% Similarity=0.053 Sum_probs=85.1
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
..+++||........+... ....-+++++. ++.+|+.... ...+++||.... ....+...+. ..
T Consensus 100 ~~i~~~d~~g~~~~~~~~~----~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~g~--~~~~~~~~~~---~~ 164 (286)
T 1q7f_A 100 HQIQIYNQYGQFVRKFGAT----ILQHPRGVTVDNKGRIIVVECK------VMRVIIFDQNGN--VLHKFGCSKH---LE 164 (286)
T ss_dssp CEEEEECTTSCEEEEECTT----TCSCEEEEEECTTSCEEEEETT------TTEEEEECTTSC--EEEEEECTTT---CS
T ss_pred CEEEEECCCCcEEEEecCc----cCCCceEEEEeCCCCEEEEECC------CCEEEEEcCCCC--EEEEeCCCCc---cC
Confidence 4678888554433333221 11122344443 4578877542 257999997653 1222321111 12
Q ss_pred cccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEE-eCCEEEEEeccCCCCCCc
Q 001895 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASAR-SDGLLLLCGGRDASSVPL 307 (999)
Q Consensus 229 ~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~-~~~~LyvfGG~~~~~~~~ 307 (999)
.-.++++-.++.+|+.... .+.+.+||+... ....+...+.. ..-.++++ .++.+|+....++
T Consensus 165 ~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~g~--~~~~~~~~g~~----~~p~~i~~d~~G~l~v~~~~~~----- 228 (286)
T 1q7f_A 165 FPNGVVVNDKQEIFISDNR-----AHCVKVFNYEGQ--YLRQIGGEGIT----NYPIGVGINSNGEILIADNHNN----- 228 (286)
T ss_dssp SEEEEEECSSSEEEEEEGG-----GTEEEEEETTCC--EEEEESCTTTS----CSEEEEEECTTCCEEEEECSSS-----
T ss_pred CcEEEEECCCCCEEEEECC-----CCEEEEEcCCCC--EEEEEccCCcc----CCCcEEEECCCCCEEEEeCCCC-----
Confidence 2344555555578887543 247899998665 43444322210 11122333 4678888764321
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCC
Q 001895 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAA 372 (999)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t 372 (999)
..+..|+......+.+.... +.. .-+++++. +++|||.. . .+.|.+|+...
T Consensus 229 ~~i~~~~~~g~~~~~~~~~~---~~~-~~~~i~~~~~g~l~vs~-~---------~~~v~v~~~~~ 280 (286)
T 1q7f_A 229 FNLTIFTQDGQLISALESKV---KHA-QCFDVALMDDGSVVLAS-K---------DYRLYIYRYVQ 280 (286)
T ss_dssp CEEEEECTTSCEEEEEEESS---CCS-CEEEEEEETTTEEEEEE-T---------TTEEEEEECSC
T ss_pred EEEEEECCCCCEEEEEcccC---CCC-cceeEEECCCCcEEEEC-C---------CCeEEEEEccc
Confidence 14566664322122222211 111 12334443 67898874 2 13477776543
No 255
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=43.56 E-value=4.6e+02 Score=30.69 Aligned_cols=62 Identities=10% Similarity=-0.099 Sum_probs=33.7
Q ss_pred ccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEe
Q 001895 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVV 219 (999)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~ 219 (999)
...+++++|+.+.+-..+..... ...+..+.+..-+++.++++.. .+++++|+.+.. ...+.
T Consensus 89 ~~~~i~~~d~~~~~~~~l~~~~~-~~~~~~~~~~SPdG~~la~~~~-------~~i~~~~~~~g~--~~~~~ 150 (723)
T 1xfd_A 89 YTGYYVLSKIPHGDPQSLDPPEV-SNAKLQYAGWGPKGQQLIFIFE-------NNIYYCAHVGKQ--AIRVV 150 (723)
T ss_dssp CCSEEEEEESSSCCCEECCCTTC-CSCCCSBCCBCSSTTCEEEEET-------TEEEEESSSSSC--CEEEE
T ss_pred ceeeEEEEECCCCceEeccCCcc-ccccccccEECCCCCEEEEEEC-------CeEEEEECCCCc--eEEEe
Confidence 45789999999887666654311 1111112222224444444432 379999988753 44444
No 256
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=43.07 E-value=1.3e+02 Score=32.94 Aligned_cols=69 Identities=7% Similarity=-0.039 Sum_probs=40.5
Q ss_pred CCEEEEEcccCC---CCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcE--EEEEccCCCCCCCCeEEE
Q 001895 184 GTMVVIQGGIGP---AGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRY--LMAIGGNDGKRPLADVWA 258 (999)
Q Consensus 184 g~~iyv~GG~~~---~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~--Lyv~GG~~g~~~~ndv~~ 258 (999)
++++|+...... .....++++++|+.+. +.+. ..|.+...+++.+-.+++ +|+..+. .+++.+
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~----~vv~---~i~~g~~p~~i~~s~Dg~~~l~v~~~~-----~~~V~V 345 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG----QTSS---QISLGHDVDAISVAQDGGPDLYALSAG-----TEVLHI 345 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCC----EEEE---EEECCCCcCeEEECCCCCeEEEEEcCC-----CCeEEE
Confidence 568998754221 1223578999999884 3332 223344455665554433 5553322 268999
Q ss_pred EECCCC
Q 001895 259 LDTAAK 264 (999)
Q Consensus 259 yDl~s~ 264 (999)
||+.+.
T Consensus 346 iD~~t~ 351 (373)
T 2mad_H 346 YDAGAG 351 (373)
T ss_pred EECCCC
Confidence 999876
No 257
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=42.84 E-value=3.3e+02 Score=28.82 Aligned_cols=176 Identities=11% Similarity=0.138 Sum_probs=84.3
Q ss_pred CCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEEC
Q 001895 159 TNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVG 237 (999)
Q Consensus 159 t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~ 237 (999)
-.+|+.+......| -..+.++.. ++.+|+.|.. ..+|+-+=... .|+.+.. +....-+.++...
T Consensus 108 G~tW~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~-------g~v~~S~DgG~--tW~~~~~----~~~~~~~~~~~~~ 172 (327)
T 2xbg_A 108 GQSWSQIPLDPKLP--GSPRLIKALGNGSAEMITNV-------GAIYRTKDSGK--NWQALVQ----EAIGVMRNLNRSP 172 (327)
T ss_dssp TSSCEECCCCTTCS--SCEEEEEEEETTEEEEEETT-------CCEEEESSTTS--SEEEEEC----SCCCCEEEEEECT
T ss_pred CCCceECccccCCC--CCeEEEEEECCCCEEEEeCC-------ccEEEEcCCCC--CCEEeec----CCCcceEEEEEcC
Confidence 45799886432112 122334433 5688887742 13444321122 4999862 2223345555555
Q ss_pred CcEEEEEccCCCCCCCCeEEEEECC-CCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecC
Q 001895 238 QRYLMAIGGNDGKRPLADVWALDTA-AKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKH 316 (999)
Q Consensus 238 ~~~Lyv~GG~~g~~~~ndv~~yDl~-s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~ 316 (999)
++.+|++|- .+ .+++-+-. -. +|+.+.... ....+..+...++.+|+.+.. + .++...
T Consensus 173 ~~~~~~~g~-~G-----~~~~S~d~gG~--tW~~~~~~~----~~~~~~~~~~~~g~~~~~~~~-G------~~~~s~-- 231 (327)
T 2xbg_A 173 SGEYVAVSS-RG-----SFYSTWEPGQT--AWEPHNRTT----SRRLHNMGFTPDGRLWMIVNG-G------KIAFSD-- 231 (327)
T ss_dssp TSCEEEEET-TS-----SEEEEECTTCS--SCEEEECCS----SSCEEEEEECTTSCEEEEETT-T------EEEEEE--
T ss_pred CCcEEEEEC-CC-----cEEEEeCCCCC--ceeECCCCC----CCccceeEECCCCCEEEEeCC-c------eEEEec--
Confidence 556666552 22 34544322 34 899884321 233333334456788877642 1 122221
Q ss_pred CCCeEEEEECCCC-CCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEccc
Q 001895 317 RDGRWEWAIAPGV-SPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKS 380 (999)
Q Consensus 317 ~~~~W~w~~~~g~-~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~ 380 (999)
.++--+|...... .+.....++++.. ++.+|++|+. ..+++-.-.-.+|..+..
T Consensus 232 ~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~----------g~i~~S~DgG~tW~~~~~ 287 (327)
T 2xbg_A 232 PDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGA----------GALLCSQDGGQTWQQDVD 287 (327)
T ss_dssp TTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEEST----------TCEEEESSTTSSCEECGG
T ss_pred CCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCC----------CeEEEeCCCCcccEEcCc
Confidence 1212245544321 1222223444444 5688888762 124433333568998764
No 258
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=42.01 E-value=5.3e+02 Score=30.97 Aligned_cols=196 Identities=8% Similarity=-0.016 Sum_probs=94.0
Q ss_pred cccCeEEEEECCCCcEEEecCCCCCCCCCcC---cEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecC
Q 001895 147 GATADVHCYDVLTNKWSRITPFGEPPTPRAA---HVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG 222 (999)
Q Consensus 147 g~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~---hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g 222 (999)
|..+-+++||+.+..+..+......+..... ++.... ++.|+|. .. ..-+++|+..+.. +.......
T Consensus 279 gt~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWig-t~------~~Gl~~~~~~~~~--~~~~~~~~ 349 (795)
T 4a2l_A 279 GTFNDLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLG-TY------FGGLNYYHPIRNR--FKNIRNIP 349 (795)
T ss_dssp EESSCEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEE-ES------SSCEEEECGGGGS--SEEECCCT
T ss_pred EeCChhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEE-EC------CCCeEEeCCCccc--ceEEcCCC
Confidence 4445688899999999887543211111111 222222 3466653 21 1347888877643 55543211
Q ss_pred ---CCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCC---CccceEEEE-EeCCE-E
Q 001895 223 ---PGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPP---PCMYATASA-RSDGL-L 294 (999)
Q Consensus 223 ---~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~---~r~~~~a~~-~~~~~-L 294 (999)
.++. ..-.+++.-.++.|||. ..+ .-+.+||..+. +++........+. ....-.+.. -.++. |
T Consensus 350 ~~~~l~~-~~V~~i~~d~~g~lWiG-t~~-----~Gl~~~~~~~~--~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~l 420 (795)
T 4a2l_A 350 YKNSLSD-NVVSCIVEDKDKNLWIG-TND-----GGLNLYNPITQ--RFTSYTLQEDESARGIGSNNIKAVYVDEKKSLV 420 (795)
T ss_dssp TSSSCSC-SSEEEEEECTTSCEEEE-ESS-----SCEEEECTTTC--CEEEECCC------CCSCSCEEEEEEETTTTEE
T ss_pred CCCCCCC-CeeEEEEECCCCCEEEE-ECC-----CCeEEEcCCCC--cEEEEecCCCCcccCCCCccEEEEEEcCCCCEE
Confidence 1111 11223333344468873 222 23788999888 6666543211000 011122222 23567 7
Q ss_pred EEEeccCCCCCCcccEEEEecCCCCeEEEEECC-CCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCC
Q 001895 295 LLCGGRDASSVPLASAYGLAKHRDGRWEWAIAP-GVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAA 372 (999)
Q Consensus 295 yvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~-g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t 372 (999)
|+. .. ...++.++..+. .+...... +..+.. .-.+.+.- ++.|+|-.. +.+++||+.+
T Consensus 421 Wig-t~------~~Gl~~~d~~~~-~~~~~~~~~~~l~~~-~v~~i~~d~~g~lwigt~-----------~Gl~~~~~~~ 480 (795)
T 4a2l_A 421 YIG-TH------AGGLSILHRNSG-QVENFNQRNSQLVNE-NVYAILPDGEGNLWLGTL-----------SALVRFNPEQ 480 (795)
T ss_dssp EEE-ET------TTEEEEEETTTC-CEEEECTTTSCCSCS-CEEEEEECSSSCEEEEES-----------SCEEEEETTT
T ss_pred EEE-eC------cCceeEEeCCCC-cEEEeecCCCCcCCC-eeEEEEECCCCCEEEEec-----------CceeEEeCCC
Confidence 773 22 123566766544 33333221 111111 11222222 467777432 2388999999
Q ss_pred CeEEEccc
Q 001895 373 GVWCDTKS 380 (999)
Q Consensus 373 ~~W~~v~~ 380 (999)
.+|..+..
T Consensus 481 ~~~~~~~~ 488 (795)
T 4a2l_A 481 RSFTTIEK 488 (795)
T ss_dssp TEEEECCB
T ss_pred CeEEEccc
Confidence 99988754
No 259
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=41.82 E-value=28 Score=36.61 Aligned_cols=65 Identities=15% Similarity=0.063 Sum_probs=41.5
Q ss_pred CeEEEecCCCCH--HHHHHHHHHhCCCCCCCCccceeEEEeccccCCC-CChHHHHHHHHHhhhcCCCCEEEecCCcccc
Q 001895 699 PIKIFGDLHGQF--GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRG-QHSLETITLLLALKVEYPNNVHLIRGNHEAA 775 (999)
Q Consensus 699 ~i~vvGDiHG~~--~~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG-~~s~evl~ll~~lk~~~P~~v~llrGNHE~~ 775 (999)
+|..+|||=|.. ..+..++..+.... + -+|+-|+-.--| ..+.+....|..+.. .+.. .||||.-
T Consensus 2 ~ilf~GDv~g~~G~~~~~~~l~~lr~~~-d------~vi~nge~~~~G~g~~~~~~~~l~~~G~----Da~T-lGNHefD 69 (255)
T 1t70_A 2 RVLFIGDVFGQPGRRVLQNHLPTIRPQF-D------FVIVNMENSAGGFGMHRDAARGALEAGA----GCLT-LGNHAWH 69 (255)
T ss_dssp EEEEECCBBHHHHHHHHHHHHHHHGGGC-S------EEEEECTBTTTTSSCCHHHHHHHHHHTC----SEEE-CCTTTTS
T ss_pred EEEEEeccCChHHHHHHHHHHHHHHhhC-C------EEEECCCCccCCcCCCHHHHHHHHhCCC----CEEE-ecccccc
Confidence 588999997765 45666666654221 1 455555544444 567788888888754 3444 4999985
No 260
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=41.47 E-value=2.8e+02 Score=28.67 Aligned_cols=63 Identities=8% Similarity=0.042 Sum_probs=36.4
Q ss_pred CEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEEC-CcEEEEEccCCCCCCCCeEEEEECCC
Q 001895 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAA 263 (999)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~-~~~Lyv~GG~~g~~~~ndv~~yDl~s 263 (999)
+.+++.|+.+ ..+.+||+.+... -..+. + ....-.+++... ++.+++.|+.++ .+..||+.+
T Consensus 85 ~~~l~~~~~d------g~i~v~d~~~~~~-~~~~~--~---~~~~i~~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~ 147 (366)
T 3k26_A 85 HPLLAVAGSR------GIIRIINPITMQC-IKHYV--G---HGNAINELKFHPRDPNLLLSVSKDH-----ALRLWNIQT 147 (366)
T ss_dssp CEEEEEEETT------CEEEEECTTTCCE-EEEEE--S---CCSCEEEEEECSSCTTEEEEEETTS-----CEEEEETTT
T ss_pred CCEEEEecCC------CEEEEEEchhceE-eeeec--C---CCCcEEEEEECCCCCCEEEEEeCCC-----eEEEEEeec
Confidence 4677777743 4799999987531 11121 1 111122333333 346777887765 588899987
Q ss_pred C
Q 001895 264 K 264 (999)
Q Consensus 264 ~ 264 (999)
.
T Consensus 148 ~ 148 (366)
T 3k26_A 148 D 148 (366)
T ss_dssp T
T ss_pred C
Confidence 6
No 261
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=41.10 E-value=3.1e+02 Score=27.97 Aligned_cols=154 Identities=16% Similarity=0.109 Sum_probs=76.9
Q ss_pred CEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCC
Q 001895 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
+.+|+.+..+ ..+++||+.+. ...... +. ..-++++.-.++.||+....+ ..+++||+.+.
T Consensus 40 ~~l~~~~~~~------~~i~~~~~~~~---~~~~~~----~~-~~~~~l~~~~dg~l~v~~~~~-----~~i~~~d~~~g 100 (296)
T 3e5z_A 40 SAVIFSDVRQ------NRTWAWSDDGQ---LSPEMH----PS-HHQNGHCLNKQGHLIACSHGL-----RRLERQREPGG 100 (296)
T ss_dssp TEEEEEEGGG------TEEEEEETTSC---EEEEES----SC-SSEEEEEECTTCCEEEEETTT-----TEEEEECSTTC
T ss_pred CEEEEEeCCC------CEEEEEECCCC---eEEEEC----CC-CCcceeeECCCCcEEEEecCC-----CeEEEEcCCCC
Confidence 4577777542 47999998873 444431 11 222344444455677765322 46899999877
Q ss_pred CceEEEcccCCCCCCCccceEEEEEeCCEEEEE----eccCC-------CCCCcccEEEEecCCCCeEEEEECCCCCCCC
Q 001895 265 PYEWRKLEPEGEGPPPCMYATASARSDGLLLLC----GGRDA-------SSVPLASAYGLAKHRDGRWEWAIAPGVSPSP 333 (999)
Q Consensus 265 ~~~W~~v~~~~~~P~~r~~~~a~~~~~~~Lyvf----GG~~~-------~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~ 333 (999)
+.+.+...............+.-.++++|+. |.... .......+|.++.. ++....... .
T Consensus 101 --~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~--g~~~~~~~~-----~ 171 (296)
T 3e5z_A 101 --EWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD--GTLSAPIRD-----R 171 (296)
T ss_dssp --CEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT--SCEEEEECC-----C
T ss_pred --cEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC--CCEEEeecC-----C
Confidence 5554422111000011112333457888886 43210 11123467777765 333322211 1
Q ss_pred cceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECC-CCeE
Q 001895 334 RYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTA-AGVW 375 (999)
Q Consensus 334 R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~-t~~W 375 (999)
..-.+.++. ++++++.+.. .+.|++||+. +++.
T Consensus 172 ~~~~gi~~s~dg~~lv~~~~---------~~~i~~~~~~~~g~~ 206 (296)
T 3e5z_A 172 VKPNGLAFLPSGNLLVSDTG---------DNATHRYCLNARGET 206 (296)
T ss_dssp SSEEEEEECTTSCEEEEETT---------TTEEEEEEECSSSCE
T ss_pred CCCccEEECCCCCEEEEeCC---------CCeEEEEEECCCCcC
Confidence 112333433 4555555432 3469999986 5555
No 262
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=40.80 E-value=6.3e+02 Score=31.49 Aligned_cols=180 Identities=8% Similarity=0.000 Sum_probs=86.1
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCC---
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG--- 226 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~--- 226 (999)
..+|.+++.......+.... .....+..-+++.++++. ...++++|+... +...+. +..+.
T Consensus 226 ~~l~~~~~~g~~~~~l~~~~-----~~~~~~~SpDG~~la~~~-------~~~i~~~d~~~~--~l~~l~--~~~~~~~~ 289 (1045)
T 1k32_A 226 GQIYSTDLDGKDLRKHTSFT-----DYYPRHLNTDGRRILFSK-------GGSIYIFNPDTE--KIEKIE--IGDLESPE 289 (1045)
T ss_dssp CEEEEEETTSCSCEECCCCC-----SSCEEEEEESSSCEEEEE-------TTEEEEECTTTC--CEEECC--CCCCCBCC
T ss_pred eEEEEEeCCCCcceEecCCC-----CcceeeEcCCCCEEEEEe-------CCEEEEecCCce--Eeeeec--cCcccccc
Confidence 46888888776655554331 111112223444444442 257999998443 233322 11110
Q ss_pred -----CCcccEEEEE-CCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEecc
Q 001895 227 -----PRYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 300 (999)
Q Consensus 227 -----~R~~h~~~v~-~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~ 300 (999)
...-..++.- .+++.++++. -..++.+++.+. ....+..... ......... +++.+++++.
T Consensus 290 ~~~~~~~~v~~~~~S~pdG~~la~~~------~~~i~~~~~~~~--~~~~~~~~~~----~~~~~~~~s-dg~~l~~~s~ 356 (1045)
T 1k32_A 290 DRIISIPSKFAEDFSPLDGDLIAFVS------RGQAFIQDVSGT--YVLKVPEPLR----IRYVRRGGD-TKVAFIHGTR 356 (1045)
T ss_dssp SEEEECGGGGEEEEEECGGGCEEEEE------TTEEEEECTTSS--BEEECSCCSC----EEEEEECSS-SEEEEEEEET
T ss_pred cccccccccceeeecCCCCCEEEEEE------cCEEEEEcCCCC--ceEEccCCCc----ceEEeeeEc-CCCeEEEEEC
Confidence 0122344444 4444444443 247888998776 5544432111 011122223 6655555543
Q ss_pred CCCCCCcccEE-EEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEc
Q 001895 301 DASSVPLASAY-GLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (999)
Q Consensus 301 ~~~~~~~~d~~-~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v 378 (999)
...+| .++.... . .....+ ........++. +++.+++++. ...++++|+++++-..+
T Consensus 357 ------~~~l~~~~d~~~~-~--~~~l~~---~~~~~~~~~~SpDG~~la~~~~---------~~~v~~~d~~tg~~~~~ 415 (1045)
T 1k32_A 357 ------EGDFLGIYDYRTG-K--AEKFEE---NLGNVFAMGVDRNGKFAVVAND---------RFEIMTVDLETGKPTVI 415 (1045)
T ss_dssp ------TEEEEEEEETTTC-C--EEECCC---CCCSEEEEEECTTSSEEEEEET---------TSEEEEEETTTCCEEEE
T ss_pred ------CCceEEEEECCCC-C--ceEecC---CccceeeeEECCCCCEEEEECC---------CCeEEEEECCCCceEEe
Confidence 23566 5554433 2 122221 11122233333 5666666543 24699999999887766
Q ss_pred c
Q 001895 379 K 379 (999)
Q Consensus 379 ~ 379 (999)
.
T Consensus 416 ~ 416 (1045)
T 1k32_A 416 E 416 (1045)
T ss_dssp E
T ss_pred c
Confidence 4
No 263
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=40.32 E-value=5.3e+02 Score=30.48 Aligned_cols=152 Identities=16% Similarity=0.104 Sum_probs=78.6
Q ss_pred CcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCc-eEEEcccCCCCCC
Q 001895 201 EDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPY-EWRKLEPEGEGPP 279 (999)
Q Consensus 201 ~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~-~W~~v~~~~~~P~ 279 (999)
+++|++|+.+...+|..+.. .. ..........++.||+....++ ....++.+|+.+... .|+.+.+....
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~---~~--~~~~~~~~~~g~~l~~~t~~~~--~~~~l~~~d~~~~~~~~~~~l~~~~~~-- 329 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQG---DL--DADVSLVDNKGSTLYLLTNRDA--PNRRLVTVDAANPGPAHWRDLIPERQQ-- 329 (693)
T ss_dssp CEEEEEETTSTTCCCEEEEC---SS--SSCEEEEEEETTEEEEEECTTC--TTCEEEEEETTSCCGGGCEEEECCCSS--
T ss_pred cEEEEEECCCCCCceEEEeC---CC--CceEEEEeccCCEEEEEECCCC--CCCEEEEEeCCCCCccccEEEecCCCC--
Confidence 68999999775345887751 11 1112222233348888876543 345899999976421 48877554331
Q ss_pred CccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEE-EC-CEEEEE-cCcCCCC
Q 001895 280 PCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVF-VN-ARLHVS-GGALGGG 356 (999)
Q Consensus 280 ~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~-~~-~~L~V~-GG~~~~~ 356 (999)
.. .....++.|++..-.++ ...++.++... .+. ..+. . |.......... .+ +.|++. .+...
T Consensus 330 --~~--~~s~~g~~lv~~~~~~g----~~~l~~~d~~g--~~~-~~l~-~-p~~~~~~~~~~~~d~~~l~~~~ss~~t-- 394 (693)
T 3iuj_A 330 --VL--TVHSGSGYLFAEYMVDA----TARVEQFDYEG--KRV-REVA-L-PGLGSVSGFNGKHDDPALYFGFENYAQ-- 394 (693)
T ss_dssp --CE--EEEEETTEEEEEEEETT----EEEEEEECTTS--CEE-EEEC-C-SSSSEEEECCCCTTCSCEEEEEECSSS--
T ss_pred --EE--EEEEECCEEEEEEEECC----eeEEEEEECCC--Cee-EEee-c-CCCceEEeeecCCCCCEEEEEecCCCC--
Confidence 11 44455667666544332 23455555442 222 1221 1 11111111111 12 334333 22211
Q ss_pred CCcccCCeEEEEECCCCeEEEcccC
Q 001895 357 RMVEDSSSVAVLDTAAGVWCDTKSV 381 (999)
Q Consensus 357 ~~~~~~~~v~vyD~~t~~W~~v~~~ 381 (999)
...++.||+.+++++.+...
T Consensus 395 -----P~~l~~~d~~~g~~~~l~~~ 414 (693)
T 3iuj_A 395 -----PPTLYRFEPKSGAISLYRAS 414 (693)
T ss_dssp -----CCEEEEECTTTCCEEEEECC
T ss_pred -----CCEEEEEECCCCeEEEEEeC
Confidence 46799999999998877654
No 264
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=40.13 E-value=30 Score=40.45 Aligned_cols=24 Identities=17% Similarity=0.444 Sum_probs=17.8
Q ss_pred CHHHHHHHHHHcCCc--EEEEecccc
Q 001895 883 GPDRVMEFCNNNDLQ--LIVRAHECV 906 (999)
Q Consensus 883 g~~~~~~fl~~~~l~--~iiR~H~~~ 906 (999)
..+.+..+|++++++ +++-||.=.
T Consensus 358 ~R~~Ll~~l~~~~v~n~vvLsGDvH~ 383 (527)
T 2yeq_A 358 QRERVINFIKSKNLNNVVVLTGDVHA 383 (527)
T ss_dssp HHHHHHHHHHHTTCCCEEEEECSSSS
T ss_pred HHHHHHHHHHHhCCCCEEEEEcchHH
Confidence 356788889999985 777787533
No 265
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=39.65 E-value=3.1e+02 Score=27.61 Aligned_cols=105 Identities=11% Similarity=0.083 Sum_probs=49.7
Q ss_pred EEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCC
Q 001895 240 YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDG 319 (999)
Q Consensus 240 ~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~ 319 (999)
.+++.|+.++ .+..||.... -..+..... ..........++. ++.|+.++ .+..++..+.
T Consensus 156 ~~l~~~~~d~-----~i~i~d~~~~---~~~~~~~~~----~~i~~~~~~~~~~-~~~~~~dg------~i~i~d~~~~- 215 (313)
T 3odt_A 156 NKFLTASADK-----TIKLWQNDKV---IKTFSGIHN----DVVRHLAVVDDGH-FISCSNDG------LIKLVDMHTG- 215 (313)
T ss_dssp TEEEEEETTS-----CEEEEETTEE---EEEECSSCS----SCEEEEEEEETTE-EEEEETTS------EEEEEETTTC-
T ss_pred CEEEEEECCC-----CEEEEecCce---EEEEeccCc----ccEEEEEEcCCCe-EEEccCCC------eEEEEECCch-
Confidence 4667777665 4777884332 222222111 1223333445667 66666543 2444544433
Q ss_pred eEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEc
Q 001895 320 RWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (999)
Q Consensus 320 ~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v 378 (999)
+-..... + ....-.++++. ++ .++.|+. ...|.+||+.+.+....
T Consensus 216 ~~~~~~~-~---~~~~i~~~~~~~~~-~l~~~~~---------dg~v~iwd~~~~~~~~~ 261 (313)
T 3odt_A 216 DVLRTYE-G---HESFVYCIKLLPNG-DIVSCGE---------DRTVRIWSKENGSLKQV 261 (313)
T ss_dssp CEEEEEE-C---CSSCEEEEEECTTS-CEEEEET---------TSEEEEECTTTCCEEEE
T ss_pred hhhhhhh-c---CCceEEEEEEecCC-CEEEEec---------CCEEEEEECCCCceeEE
Confidence 1111111 1 11112334444 34 4556654 24589999988875543
No 266
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=39.63 E-value=8.7 Score=42.52 Aligned_cols=143 Identities=10% Similarity=0.067 Sum_probs=0.0
Q ss_pred CceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCc--EEEecCCCCC
Q 001895 94 GHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNK--WSRITPFGEP 171 (999)
Q Consensus 94 ghs~t~~~~~~~~~~~~~~~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~--W~~l~~~g~~ 171 (999)
|++.-++ .+..+++|+ ....++++|..+++ |+.-. .
T Consensus 1 g~ssP~v------------~~~~v~~gs--------------------------~dg~v~a~d~~tG~~~W~~~~-~--- 38 (369)
T 2hz6_A 1 GSSTVTL------------PETLLFVST--------------------------LDGSLHAVSKRTGSIKWTLKE-D--- 38 (369)
T ss_dssp -------------------CTTEEEEEE--------------------------TTSEEEEEETTTCCEEEEEEC-C---
T ss_pred CCCCCee------------eCCEEEEEc--------------------------CCCEEEEEECCCCCEEEEecC-C---
Q ss_pred CCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCC
Q 001895 172 PTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKR 251 (999)
Q Consensus 172 P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~ 251 (999)
....+.++.++.+|+.|+.+ ..++.||..+....|..-. ..+.......+...++ .+++|+.++
T Consensus 39 ---~~~s~p~~~~g~~~v~~s~d------g~l~a~d~~tG~~~w~~~~---~~~~~~~~sp~~~~~~--~v~~g~~dg-- 102 (369)
T 2hz6_A 39 ---PVLQVPTHVEEPAFLPDPND------GSLYTLGSKNNEGLTKLPF---TIPELVQASPCRSSDG--ILYMGKKQD-- 102 (369)
T ss_dssp ---CSCCCC-----CCEEECTTT------CCEEEC-----CCSEECSC---CHHHHHTTCSCC-------CCCCEEEE--
T ss_pred ---CceecceEcCCCEEEEeCCC------CEEEEEECCCCceeeeeec---cCccccccCceEecCC--EEEEEeCCC--
Q ss_pred CCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEE
Q 001895 252 PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLC 297 (999)
Q Consensus 252 ~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~Lyvf 297 (999)
.++.||+.+....|+.-......-.+......+...++.|+++
T Consensus 103 ---~v~a~D~~tG~~~w~~~~~~~~~~~p~~~~v~~~~~dg~v~a~ 145 (369)
T 2hz6_A 103 ---IWYVIDLLTGEKQQTLSSAFADSLSPSTSLLYLGRTEYTITMY 145 (369)
T ss_dssp ---EEEEECCC----------------------EEEEEEEEEEECC
T ss_pred ---EEEEEECCCCcEEEEecCCCcccccccCCEEEEEecCCEEEEE
No 267
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=38.67 E-value=6.7e+02 Score=31.21 Aligned_cols=197 Identities=10% Similarity=0.012 Sum_probs=96.8
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
++|.+|+.+.+...+.... . .-....+ +++.+++...........++|++|+.+. +-..+...+....+|
T Consensus 34 ~l~~~~~~gg~~~~lt~~~-----~-~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g--~~~~lt~~~~~~~~~ 105 (1045)
T 1k32_A 34 DLWEHDLKSGSTRKIVSNL-----G-VINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENG--EIKRITYFSGKSTGR 105 (1045)
T ss_dssp EEEEEETTTCCEEEEECSS-----S-EEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTT--EEEECCCCCEEEETT
T ss_pred cEEEEECCCCcEEEeeeCC-----C-cccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCC--CeEEcccCCCccccc
Confidence 7999999988877775431 1 1222233 4444444432211112357999998874 233332100000011
Q ss_pred c-c-cEEEEECCcEEEEEccCCCC-CCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCC--
Q 001895 229 Y-G-HVMALVGQRYLMAIGGNDGK-RPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDAS-- 303 (999)
Q Consensus 229 ~-~-h~~~v~~~~~Lyv~GG~~g~-~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~-- 303 (999)
. . ...+.-.++++++.+..++. .....+|.+|+.+. +...+..... ...+ ... + +++.|..+..
T Consensus 106 ~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g--~~~~l~~~~~------~~~~-~sp-G-~l~~~~~~~~~~ 174 (1045)
T 1k32_A 106 RMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGI--NFVPLNLGPA------THIL-FAD-G-RRVIGRNTFELP 174 (1045)
T ss_dssp EECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGT--EEEECCSCSC------SEEE-EET-T-EEEEEESCSCCT
T ss_pred ccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCC--CeEEecCCCc------ceee-eCC-C-EEEEeccCCCcc
Confidence 1 1 22223334455555554322 23468999999887 6666544211 1122 223 5 5555543211
Q ss_pred ------CCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEE
Q 001895 304 ------SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (999)
Q Consensus 304 ------~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~ 377 (999)
......+|..... +..... .+ ......+.++.++++++.+..++ ...+|.+++.+..-..
T Consensus 175 ~~~~~~g~~~~~lw~~~~~--~~~~~l--~~---~~~~v~~~~~s~d~l~~~~~~dg-------~~~l~~~~~~g~~~~~ 240 (1045)
T 1k32_A 175 HWKGYRGGTRGKIWIEVNS--GAFKKI--VD---MSTHVSSPVIVGHRIYFITDIDG-------FGQIYSTDLDGKDLRK 240 (1045)
T ss_dssp TSTTCCSTTCCEEEEEEET--TEEEEE--EC---CSSCCEEEEEETTEEEEEECTTS-------SCEEEEEETTSCSCEE
T ss_pred ccccccCCCcCCEEEECCC--CCeEEC--cC---CCCcccceEEeCCEEEEEEeccC-------ceEEEEEeCCCCcceE
Confidence 1123455654443 333333 21 22233445556777777765432 3469999987766555
Q ss_pred ccc
Q 001895 378 TKS 380 (999)
Q Consensus 378 v~~ 380 (999)
+..
T Consensus 241 l~~ 243 (1045)
T 1k32_A 241 HTS 243 (1045)
T ss_dssp CCC
T ss_pred ecC
Confidence 543
No 268
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=38.55 E-value=4.7e+02 Score=29.40 Aligned_cols=65 Identities=22% Similarity=0.186 Sum_probs=35.8
Q ss_pred CcccEEEEECCcEEEEEccCCCCC----CCC-e-EEEEEC------CCCCceEEEcccCCCCCCCccceEEEEEeCCEEE
Q 001895 228 RYGHVMALVGQRYLMAIGGNDGKR----PLA-D-VWALDT------AAKPYEWRKLEPEGEGPPPCMYATASARSDGLLL 295 (999)
Q Consensus 228 R~~h~~~v~~~~~Lyv~GG~~g~~----~~n-d-v~~yDl------~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~Ly 295 (999)
-..|++++..++.+|.+|-..... ... + ...+.+ ... .+..+.. ...|+++...++.+|
T Consensus 265 G~~hs~alt~~G~v~~wG~n~~GqlG~~~~~~~~~~~~~P~~v~~~~~~--~i~~ia~-------G~~hs~~lt~~G~v~ 335 (473)
T 3of7_A 265 GENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNV--VIRSIAA-------GEHHSLILSQDGDLY 335 (473)
T ss_dssp CSSEEEEEETTSCEEEEEECTTSTTCCCSCCCTTCEEEEEEECCCCTTC--CEEEEEE-------CSSEEEEEETTSCEE
T ss_pred CCCeEEEEecCCCEEEeCCCCCCCcCCCCcccCCceeeccccccccCCc--cEEEEEe-------CCCeEEEEeCCCeEE
Confidence 357888888877999999543111 100 0 011111 111 2333322 246777777789999
Q ss_pred EEeccC
Q 001895 296 LCGGRD 301 (999)
Q Consensus 296 vfGG~~ 301 (999)
.+|-..
T Consensus 336 ~wG~n~ 341 (473)
T 3of7_A 336 SCGRLD 341 (473)
T ss_dssp EEEECT
T ss_pred EEECCC
Confidence 999643
No 269
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=38.21 E-value=3.3e+02 Score=27.52 Aligned_cols=52 Identities=13% Similarity=0.157 Sum_probs=31.2
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCC
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQ 211 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~ 211 (999)
.+.++|+.+++..++-... .....-.++.+ +++.++.|+.+ ..+.+||+.+.
T Consensus 46 tV~iWd~~tg~~~~~~~~~---~~~~~V~~v~~~~~~~~l~sgs~D------g~v~iw~~~~~ 99 (318)
T 4ggc_A 46 SVYLWSASSGDILQLLQME---QPGEYISSVAWIKEGNYLAVGTSS------AEVQLWDVQQQ 99 (318)
T ss_dssp EEEEEETTTCCEEEEEECC---STTCCEEEEEECTTSSEEEEEETT------SEEEEEETTTT
T ss_pred EEEEEECCCCCEEEEEEec---CCCCeEEEEEECCCCCEEEEEECC------CcEEEeecCCc
Confidence 7899999998766553321 11111122222 44677777742 57889999875
No 270
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=37.76 E-value=3.5e+02 Score=27.67 Aligned_cols=99 Identities=12% Similarity=0.111 Sum_probs=47.8
Q ss_pred CEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC-cccEEEEECCcEEEEEccCCCCCCCCeEEEEECCC
Q 001895 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR-YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (999)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R-~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s 263 (999)
+.+++-||.+ ..+.+||+.+.......... .+.... .-.+++...++.+++.|+.++ .+..++...
T Consensus 51 ~~~l~S~s~D------~~i~vWd~~~~~~~~~~~~~--~l~~h~~~V~~~~~s~dg~~l~s~~~d~-----~i~~~~~~~ 117 (340)
T 4aow_A 51 PDMILSASRD------KTIIMWKLTRDETNYGIPQR--ALRGHSHFVSDVVISSDGQFALSGSWDG-----TLRLWDLTT 117 (340)
T ss_dssp TTEEEEEETT------SCEEEEEECCSSSCSEEEEE--EECCCSSCEEEEEECTTSSEEEEEETTS-----EEEEEETTT
T ss_pred CCEEEEEcCC------CeEEEEECCCCCcccceeeE--EEeCCCCCEEEEEECCCCCEEEEEcccc-----cceEEeecc
Confidence 4677777753 46888888764212221110 111111 112233334446777787765 467778877
Q ss_pred CCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCC
Q 001895 264 KPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (999)
Q Consensus 264 ~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~ 302 (999)
. .......... ...........+.+++.|+.++
T Consensus 118 ~--~~~~~~~~~~----~~~~~~~~~~~~~~l~s~s~d~ 150 (340)
T 4aow_A 118 G--TTTRRFVGHT----KDVLSVAFSSDNRQIVSGSRDK 150 (340)
T ss_dssp T--EEEEEEECCS----SCEEEEEECTTSSCEEEEETTS
T ss_pred c--ceeeeecCCC----CceeEEEEeecCccceeecCCC
Confidence 6 3333222211 1222223334556666776554
No 271
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=37.62 E-value=4.4e+02 Score=28.81 Aligned_cols=160 Identities=9% Similarity=0.032 Sum_probs=81.9
Q ss_pred cEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeec-CCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeE
Q 001895 178 HVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ-GPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADV 256 (999)
Q Consensus 178 hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~-g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv 256 (999)
-+++.+.+++|+|=| +-+|+++.......-..+... ..+| .....+.....++++|+|-| +.+
T Consensus 184 DAv~~~~g~~~fFkg--------~~~Wr~~~~~~~~~p~~I~~~wpgLP-~~iDAa~~~~~~g~~~fFkg-------~~y 247 (365)
T 3ba0_A 184 DAVTTVGNKIFFFKD--------RFFWLKVSERPKTSVNLISSLWPTLP-SGIEAAYEIEARNQVFLFKD-------DKY 247 (365)
T ss_dssp SCEEEETTEEEEEET--------TEEEECCSSCCCCCEEEHHHHCSSCC-SSCCEEEEEGGGTEEEEEET-------TEE
T ss_pred eeEEEcCCeEEEEeC--------CEEEEEcCCCccCCccchhhhccCCC-CCccEEEEecCCCEEEEEeC-------CEE
Confidence 345567889999866 346666544321111111111 1234 22333222222348999976 467
Q ss_pred EEEECCCCCceE-EEcccCCCCCCCccceEEEEEe-CCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCC-----
Q 001895 257 WALDTAAKPYEW-RKLEPEGEGPPPCMYATASARS-DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGV----- 329 (999)
Q Consensus 257 ~~yDl~s~~~~W-~~v~~~~~~P~~r~~~~a~~~~-~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~----- 329 (999)
|+|+.......+ ..+...+-+..+..-.+|.... ++++|+|-| +..|.|+.... . ..++.
T Consensus 248 Wr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG--------~~yw~yd~~~~---~--v~~gyPk~I~ 314 (365)
T 3ba0_A 248 WLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVD--------NQYWRYDERRQ---M--MDPGYPKLIT 314 (365)
T ss_dssp EECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEET--------TEEEEEETTTT---E--ECSSCCCCHH
T ss_pred EEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEEC--------CEEEEEeCCcc---e--ecCCCCcchh
Confidence 888754321122 2333322211122344444443 589999966 34677776543 1 11111
Q ss_pred ---CCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEE
Q 001895 330 ---SPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (999)
Q Consensus 330 ---~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~ 377 (999)
+..+..-.++... ++++|.|=| +..|.||..+.+-..
T Consensus 315 ~~f~g~p~~iDaA~~~~~g~~YfFkg-----------~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 315 KNFQGIGPKIDAVFYSKNKYYYFFQG-----------SNQFEYDFLLQRITK 355 (365)
T ss_dssp HHSTTCCSSCSEEEEETTTEEEEEET-----------TEEEEEETTTTEEEE
T ss_pred hcCCCCCCccceeeEecCCcEEEEeC-----------CEEEEEECCccEEec
Confidence 1122223445545 789999865 348999998887654
No 272
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=37.32 E-value=3.2e+02 Score=27.09 Aligned_cols=149 Identities=13% Similarity=0.045 Sum_probs=71.7
Q ss_pred CCEEEE-EcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECC
Q 001895 184 GTMVVI-QGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTA 262 (999)
Q Consensus 184 g~~iyv-~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~ 262 (999)
++.+|+ .... ...+++||..+.. ..... ......-+++++..++.||+... + +.+++||+.
T Consensus 34 ~g~l~v~~~~~------~~~i~~~~~~~~~--~~~~~----~~~~~~p~~i~~~~~g~l~v~~~-~-----~~i~~~d~~ 95 (270)
T 1rwi_B 34 AGNVYVTSEGM------YGRVVKLATGSTG--TTVLP----FNGLYQPQGLAVDGAGTVYVTDF-N-----NRVVTLAAG 95 (270)
T ss_dssp TCCEEEEECSS------SCEEEEECC-------EECC----CCSCCSCCCEEECTTCCEEEEET-T-----TEEEEECTT
T ss_pred CCCEEEEccCC------CCcEEEecCCCcc--cceEe----eCCcCCcceeEECCCCCEEEEcC-C-----CEEEEEeCC
Confidence 347777 4332 2568888876642 22221 11112234455554446888764 2 368999988
Q ss_pred CCCceEEEcccCCCCCCCccceEEEEE-eCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEE
Q 001895 263 AKPYEWRKLEPEGEGPPPCMYATASAR-SDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVF 341 (999)
Q Consensus 263 s~~~~W~~v~~~~~~P~~r~~~~a~~~-~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~ 341 (999)
.. ....+..... ..-.++.+ .++++|+.... ...++.++..+. ........+ ...-.++++
T Consensus 96 ~~--~~~~~~~~~~-----~~p~~i~~~~~g~l~v~~~~------~~~i~~~~~~~~-~~~~~~~~~----~~~p~~i~~ 157 (270)
T 1rwi_B 96 SN--NQTVLPFDGL-----NYPEGLAVDTQGAVYVADRG------NNRVVKLAAGSK-TQTVLPFTG----LNDPDGVAV 157 (270)
T ss_dssp CS--CCEECCCCSC-----SSEEEEEECTTCCEEEEEGG------GTEEEEECTTCC-SCEECCCCS----CCSCCCEEE
T ss_pred Cc--eEeeeecCCc-----CCCcceEECCCCCEEEEECC------CCEEEEEECCCc-eeEeecccc----CCCceeEEE
Confidence 76 3333322111 11122233 36788887542 224556644322 222111111 111223344
Q ss_pred E-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEE
Q 001895 342 V-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (999)
Q Consensus 342 ~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~ 377 (999)
. +++|||.... .+.|.+||+.+..-..
T Consensus 158 ~~~g~l~v~~~~---------~~~i~~~~~~~~~~~~ 185 (270)
T 1rwi_B 158 DNSGNVYVTDTD---------NNRVVKLEAESNNQVV 185 (270)
T ss_dssp CTTCCEEEEEGG---------GTEEEEECTTTCCEEE
T ss_pred eCCCCEEEEECC---------CCEEEEEecCCCceEe
Confidence 3 5788887542 2468999988775443
No 273
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=35.95 E-value=5.3e+02 Score=29.27 Aligned_cols=73 Identities=15% Similarity=0.197 Sum_probs=39.0
Q ss_pred ECCcEEEEEccCCCCCCCCeEEEEECCCCCc--eEEEcc-------cCCCCCCCccceEEEEEeCCEEEEEeccCCCCCC
Q 001895 236 VGQRYLMAIGGNDGKRPLADVWALDTAAKPY--EWRKLE-------PEGEGPPPCMYATASARSDGLLLLCGGRDASSVP 306 (999)
Q Consensus 236 ~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~--~W~~v~-------~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~ 306 (999)
...++||+-|..+ +.+++||+.+++. +=.++- ..+. .+-|+..+..++ |||.---+..+..
T Consensus 93 ~~r~~l~v~~l~s-----~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~----s~Ph~~~~~pdG-i~Vs~~g~~~g~~ 162 (462)
T 2ece_A 93 IERRFLIVPGLRS-----SRIYIIDTKPNPREPKIIKVIEPEEVKKVSGY----SRLHTVHCGPDA-IYISALGNEEGEG 162 (462)
T ss_dssp CCSCEEEEEBTTT-----CCEEEEECCSCTTSCEEEEEECHHHHHHHHCE----EEEEEEEECSSC-EEEEEEEETTSCS
T ss_pred ccCCEEEEccCCC-----CeEEEEECCCCCCCceeeeeechhhcccccCC----CcccceeECCCe-EEEEcCCCcCCCC
Confidence 3345788777654 5799999976632 222221 1111 234555555677 6663222222223
Q ss_pred cccEEEEecCCC
Q 001895 307 LASAYGLAKHRD 318 (999)
Q Consensus 307 ~~d~~~~~~~~~ 318 (999)
-..+..+|..+.
T Consensus 163 ~g~v~vlD~~T~ 174 (462)
T 2ece_A 163 PGGILMLDHYSF 174 (462)
T ss_dssp CCEEEEECTTTC
T ss_pred CCeEEEEECCCC
Confidence 466777877654
No 274
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=35.26 E-value=4.2e+02 Score=27.90 Aligned_cols=146 Identities=13% Similarity=0.070 Sum_probs=74.2
Q ss_pred EEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCC-CCCcccEEEEEC-CcEEEEEccCCCCCCCCeEEEEECCC
Q 001895 186 MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP-GPRYGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAA 263 (999)
Q Consensus 186 ~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P-~~R~~h~~~v~~-~~~Lyv~GG~~g~~~~ndv~~yDl~s 263 (999)
.+++.|+.+ ..+.+||+.+.. ..... ... ....-.+++... +..+++.|+.++ .+..||+.+
T Consensus 87 ~~l~s~~~d------g~i~iwd~~~~~--~~~~~---~~~~h~~~v~~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~ 150 (383)
T 3ei3_B 87 TTVAVGSKG------GDIILWDYDVQN--KTSFI---QGMGPGDAITGMKFNQFNTNQLFVSSIRG-----ATTLRDFSG 150 (383)
T ss_dssp TEEEEEEBT------SCEEEEETTSTT--CEEEE---CCCSTTCBEEEEEEETTEEEEEEEEETTT-----EEEEEETTS
T ss_pred CEEEEEcCC------CeEEEEeCCCcc--cceee---ecCCcCCceeEEEeCCCCCCEEEEEeCCC-----EEEEEECCC
Confidence 566677642 478999998753 44332 111 111222333444 346777777665 688899987
Q ss_pred CCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-
Q 001895 264 KPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV- 342 (999)
Q Consensus 264 ~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~- 342 (999)
. ....+...... ...........++.+++.|+.++ .+..++.... . ... ..+ ....-.++++.
T Consensus 151 ~--~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~------~i~i~d~~~~-~-~~~-~~~---h~~~v~~~~~~~ 214 (383)
T 3ei3_B 151 S--VIQVFAKTDSW--DYWYCCVDVSVSRQMLATGDSTG------RLLLLGLDGH-E-IFK-EKL---HKAKVTHAEFNP 214 (383)
T ss_dssp C--EEEEEECCCCS--SCCEEEEEEETTTTEEEEEETTS------EEEEEETTSC-E-EEE-EEC---SSSCEEEEEECS
T ss_pred C--ceEEEeccCCC--CCCeEEEEECCCCCEEEEECCCC------CEEEEECCCC-E-EEE-ecc---CCCcEEEEEECC
Confidence 6 66555433210 01122233344667777777653 3444444222 1 111 111 11112333333
Q ss_pred CCE-EEEEcCcCCCCCCcccCCeEEEEECCC
Q 001895 343 NAR-LHVSGGALGGGRMVEDSSSVAVLDTAA 372 (999)
Q Consensus 343 ~~~-L~V~GG~~~~~~~~~~~~~v~vyD~~t 372 (999)
++. +++.|+.+ ..|.+||+.+
T Consensus 215 ~~~~~l~s~~~d---------~~i~iwd~~~ 236 (383)
T 3ei3_B 215 RCDWLMATSSVD---------ATVKLWDLRN 236 (383)
T ss_dssp SCTTEEEEEETT---------SEEEEEEGGG
T ss_pred CCCCEEEEEeCC---------CEEEEEeCCC
Confidence 344 77777653 3588899887
No 275
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=35.12 E-value=5.5e+02 Score=29.17 Aligned_cols=113 Identities=12% Similarity=0.008 Sum_probs=53.0
Q ss_pred ccCeEEEEECCCC----cEEEecCCCCC----CCCCcCcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEe
Q 001895 148 ATADVHCYDVLTN----KWSRITPFGEP----PTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVV 219 (999)
Q Consensus 148 ~~~dv~~yD~~t~----~W~~l~~~g~~----P~pR~~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~ 219 (999)
..+.++++|..++ +-.+.....+. -.. .-|+..+..+-|||----+..+...+.+.++|..+.. .-.+++
T Consensus 104 ~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s-~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~T~~-v~~~~~ 181 (462)
T 2ece_A 104 RSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYS-RLHTVHCGPDAIYISALGNEEGEGPGGILMLDHYSFE-PLGKWE 181 (462)
T ss_dssp TTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEE-EEEEEEECSSCEEEEEEEETTSCSCCEEEEECTTTCC-EEEECC
T ss_pred CCCeEEEEECCCCCCCceeeeeechhhcccccCCC-cccceeECCCeEEEEcCCCcCCCCCCeEEEEECCCCe-EEEEEc
Confidence 3458999999876 43333210000 011 2344444433266532111233445789999999853 111121
Q ss_pred ecCCCCCCCcccEEEEE-CCcEEEEEc---------cCCCC----CCCCeEEEEECCCC
Q 001895 220 VQGPGPGPRYGHVMALV-GQRYLMAIG---------GNDGK----RPLADVWALDTAAK 264 (999)
Q Consensus 220 ~~g~~P~~R~~h~~~v~-~~~~Lyv~G---------G~~g~----~~~ndv~~yDl~s~ 264 (999)
.+..|. -+++...+. ..+.+|+-- |.+.. .+.+.+.+||+.+.
T Consensus 182 -~~~~~~-~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~ 238 (462)
T 2ece_A 182 -IDRGDQ-YLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR 238 (462)
T ss_dssp -SBCTTC-CCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT
T ss_pred -cCCCCc-cccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC
Confidence 112221 112212122 232444431 23322 35689999999876
No 276
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=34.59 E-value=3.8e+02 Score=27.22 Aligned_cols=104 Identities=13% Similarity=0.074 Sum_probs=52.8
Q ss_pred cCeEEEEECCCCcEEEecCCCCCCCCC-cCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCC
Q 001895 149 TADVHCYDVLTNKWSRITPFGEPPTPR-AAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (999)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR-~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P 225 (999)
.+.++.+|+.+.+.......+ ... .-+.++.. ++.+|+.+.. ...+++||+.+....+ .+. .+. +
T Consensus 10 ~~~v~~~d~~~~~~~~~~~~~---~~~~~~~~~~~s~dg~~l~v~~~~------~~~v~~~d~~~~~~~~-~~~-~~~-~ 77 (337)
T 1pby_B 10 PDKLVVIDTEKMAVDKVITIA---DAGPTPMVPMVAPGGRIAYATVNK------SESLVKIDLVTGETLG-RID-LST-P 77 (337)
T ss_dssp TTEEEEEETTTTEEEEEEECT---TCTTCCCCEEECTTSSEEEEEETT------TTEEEEEETTTCCEEE-EEE-CCB-T
T ss_pred CCeEEEEECCCCcEEEEEEcC---CCCCCccceEEcCCCCEEEEEeCC------CCeEEEEECCCCCeEe-eEE-cCC-c
Confidence 347899999987655433322 110 12233333 3377777643 2579999998753112 222 111 0
Q ss_pred C--CCcccEEEEEC-CcEEEEEccC---CCCC---CCCeEEEEECCCC
Q 001895 226 G--PRYGHVMALVG-QRYLMAIGGN---DGKR---PLADVWALDTAAK 264 (999)
Q Consensus 226 ~--~R~~h~~~v~~-~~~Lyv~GG~---~g~~---~~ndv~~yDl~s~ 264 (999)
. ...-+.+++.. +.+||+.... .... .-+.+++||+.+.
T Consensus 78 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~ 125 (337)
T 1pby_B 78 EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETL 125 (337)
T ss_dssp TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTT
T ss_pred ccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCC
Confidence 0 00123344443 3367776421 1111 1368999999887
No 277
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=34.58 E-value=3.8e+02 Score=27.12 Aligned_cols=67 Identities=12% Similarity=0.198 Sum_probs=36.1
Q ss_pred CEEEEEcccCCCCCCcCcEEEEecCCCC-----CceEEEeecCCCCCCCcccEEEEECC--cEEEEEccCCCCCCCCeEE
Q 001895 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQR-----PRWHRVVVQGPGPGPRYGHVMALVGQ--RYLMAIGGNDGKRPLADVW 257 (999)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~vyD~~t~t-----~kW~~v~~~g~~P~~R~~h~~~v~~~--~~Lyv~GG~~g~~~~ndv~ 257 (999)
+.+++.|+.+ ..+.+||+.+.. ..|..+..... ....-.+++...+ +.+++.|+.++ .+.
T Consensus 71 ~~~l~s~~~d------g~v~vwd~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~dg-----~v~ 137 (351)
T 3f3f_A 71 GRIIASASYD------KTVKLWEEDPDQEECSGRRWNKLCTLND--SKGSLYSVKFAPAHLGLKLACLGNDG-----ILR 137 (351)
T ss_dssp CSEEEEEETT------SCEEEEEECTTSCTTSSCSEEEEEEECC--CSSCEEEEEECCGGGCSEEEEEETTC-----EEE
T ss_pred CCEEEEEcCC------CeEEEEecCCCcccccccCcceeeeecc--cCCceeEEEEcCCCCCcEEEEecCCC-----cEE
Confidence 5667777642 468889987631 23444442211 1111222333332 35777777665 678
Q ss_pred EEECCCC
Q 001895 258 ALDTAAK 264 (999)
Q Consensus 258 ~yDl~s~ 264 (999)
.||+.+.
T Consensus 138 iwd~~~~ 144 (351)
T 3f3f_A 138 LYDALEP 144 (351)
T ss_dssp EEECSST
T ss_pred EecCCCh
Confidence 8887654
No 278
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=34.48 E-value=3.7e+02 Score=31.56 Aligned_cols=109 Identities=6% Similarity=-0.121 Sum_probs=49.7
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCC---CCCcCcEEEEecCCCCCceEEEeecCCCCC
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPA---GLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~---~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~ 226 (999)
.++.+|+.+++-..+...... ....-.+.+.- +++.++++..... .....+++++|+.+.. -..+... ....
T Consensus 38 ~i~~~d~~~g~~~~~~~~~~~-~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~--~~~l~~~-~~~~ 113 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGKKI-ESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGD--PQSLDPP-EVSN 113 (723)
T ss_dssp CEEEBCGGGCCCEEEECTTTT-TTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCC--CEECCCT-TCCS
T ss_pred CEEEEECCCCcEEEEeccccc-cccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCc--eEeccCC-cccc
Confidence 678888877765544332110 00011222222 4454455432211 1234789999998853 3334311 1111
Q ss_pred CCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcc
Q 001895 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (999)
Q Consensus 227 ~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (999)
.+..+ .+.-.+++.++++.. .+++++|+.+. +..++.
T Consensus 114 ~~~~~-~~~SPdG~~la~~~~------~~i~~~~~~~g--~~~~~~ 150 (723)
T 1xfd_A 114 AKLQY-AGWGPKGQQLIFIFE------NNIYYCAHVGK--QAIRVV 150 (723)
T ss_dssp CCCSB-CCBCSSTTCEEEEET------TEEEEESSSSS--CCEEEE
T ss_pred ccccc-cEECCCCCEEEEEEC------CeEEEEECCCC--ceEEEe
Confidence 11111 112222234444432 37999998876 444443
No 279
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=34.07 E-value=37 Score=39.56 Aligned_cols=66 Identities=21% Similarity=0.223 Sum_probs=38.9
Q ss_pred CeEEEecCCCCHH--------------------HHHHHHHHhCCCCCCCCccceeEEEeccccCCCCC-----hHHHHHH
Q 001895 699 PIKIFGDLHGQFG--------------------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQH-----SLETITL 753 (999)
Q Consensus 699 ~i~vvGDiHG~~~--------------------~L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~-----s~evl~l 753 (999)
.|+-+-|+||++. .|..+++...-... ..-+|..||.+...+. ...++.+
T Consensus 5 tILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~-----n~llldaGD~~qGs~~~~~~~g~~~i~~ 79 (530)
T 4h1s_A 5 TILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEP-----NVLLLDAGDQYQGTIWFTVYKGAEVAHF 79 (530)
T ss_dssp EEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCS-----SEEEEECSCCSCSSHHHHHHTTHHHHHH
T ss_pred EEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCc-----CeEEEEeCCcccchHHHHHhCChHHHHH
Confidence 3667889999863 34444444321111 1245668999986542 2344555
Q ss_pred HHHhhhcCCCCEEEecCCccc
Q 001895 754 LLALKVEYPNNVHLIRGNHEA 774 (999)
Q Consensus 754 l~~lk~~~P~~v~llrGNHE~ 774 (999)
|-+|.. =.+..||||.
T Consensus 80 mN~lgy-----Da~~lGNHEF 95 (530)
T 4h1s_A 80 MNALRY-----DAMALGNHEF 95 (530)
T ss_dssp HHHTTC-----CEEECCGGGG
T ss_pred HhccCC-----CEEEEchhhh
Confidence 555532 2567899997
No 280
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=34.05 E-value=4.1e+02 Score=28.91 Aligned_cols=64 Identities=17% Similarity=0.152 Sum_probs=35.4
Q ss_pred cccEEEEECCcEEEEEccCC----CCCCCCeEEEEE----CCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEecc
Q 001895 229 YGHVMALVGQRYLMAIGGND----GKRPLADVWALD----TAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 300 (999)
Q Consensus 229 ~~h~~~v~~~~~Lyv~GG~~----g~~~~ndv~~yD----l~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~ 300 (999)
..|++++..++.+|.+|-.. +.....+....- +... +...+.. ...|+.+...++.+|.+|-.
T Consensus 274 ~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~--~v~~ia~-------G~~h~~al~~~G~v~~wG~n 344 (389)
T 3kci_A 274 SQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK--KVIAIAT-------GSLHCVCCTEDGEVYTWGDN 344 (389)
T ss_dssp TTEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTC--CEEEEEE-------CSSEEEEEETTCCEEEEECC
T ss_pred CCEEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEeccCCCC--CEEEEEe-------ccCeEEEECCCCCEEEeeCC
Confidence 46888888877999999643 211111111110 1111 2233222 24566677778999999865
Q ss_pred C
Q 001895 301 D 301 (999)
Q Consensus 301 ~ 301 (999)
.
T Consensus 345 ~ 345 (389)
T 3kci_A 345 D 345 (389)
T ss_dssp T
T ss_pred C
Confidence 3
No 281
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=32.95 E-value=4e+02 Score=26.87 Aligned_cols=157 Identities=11% Similarity=0.094 Sum_probs=79.5
Q ss_pred CcEEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeec--C-CCCCCCcccEEEEECCcEEEEEccCCCCCCC
Q 001895 177 AHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ--G-PGPGPRYGHVMALVGQRYLMAIGGNDGKRPL 253 (999)
Q Consensus 177 ~hsa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~--g-~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ 253 (999)
.-|++.+.+++|+|=| +.+|+++..... ......+. . .+| .....+.....++++|+|-|
T Consensus 33 ~DAi~~~~g~~~fFkg--------~~~Wr~~~~~~~-~~~P~~I~~~wp~lp-~~IDAA~~~~~~~k~yfFkG------- 95 (218)
T 1gen_A 33 FDGIAQIRGEIFFFKD--------RFIWRTVTPRDK-PMGPLLVATFWPELP-EKIDAVYEAPQEEKAVFFAG------- 95 (218)
T ss_dssp CSEEEEETTEEEEEET--------TEEEEESSTTSC-CEEEEEGGGTCTTSC-SCCSEEEEETTTTEEEEEET-------
T ss_pred EeEEEeCCCcEEEEEC--------CEEEEEeCCCCc-cCCCEEHHHhcCCCC-CCccEEEEECCCCEEEEEeC-------
Confidence 3455667889999977 356776654321 11111111 1 233 23333332223458999977
Q ss_pred CeEEEEECCCCCceE-EEcccCCCCCCCccceEEEEE-eCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCC---
Q 001895 254 ADVWALDTAAKPYEW-RKLEPEGEGPPPCMYATASAR-SDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPG--- 328 (999)
Q Consensus 254 ndv~~yDl~s~~~~W-~~v~~~~~~P~~r~~~~a~~~-~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g--- 328 (999)
+..|+||-.+....+ ..+...+.+.......+|... .++++|+|-| +..|.|+..+. +- ..+
T Consensus 96 ~~yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG--------~~ywr~d~~~~---~v--~~gyPr 162 (218)
T 1gen_A 96 NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG--------DKFWRYNEVKK---KM--DPGFPK 162 (218)
T ss_dssp TEEEEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET--------TEEEEEETTTT---EE--CSSCCE
T ss_pred CEEEEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC--------CEEEEEECccc---cc--cCCCCc
Confidence 578999853210000 122222222112233444443 5799999966 34677776543 11 111
Q ss_pred -----CCCCCcceeEEEEEC--CEEEEEcCcCCCCCCcccCCeEEEEECCCCe
Q 001895 329 -----VSPSPRYQHAAVFVN--ARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (999)
Q Consensus 329 -----~~P~~R~~hsav~~~--~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~ 374 (999)
-+..+..-.+|...+ +++|.|=| +..|.||..+..
T Consensus 163 ~i~~~w~g~p~~idaAf~~~~~g~~YfFkg-----------~~y~~~~~~~~~ 204 (218)
T 1gen_A 163 LIADAWNAIPDNLDAVVDLQGGGHSYFFKG-----------AYYLKLENQSLK 204 (218)
T ss_dssp EHHHHSSSCCSSCSEEEECTTTCEEEEEET-----------TEEEEEETTEEE
T ss_pred chhhccCCCCCCCCEEEEEcCCCcEEEEEC-----------CEEEEEECCcee
Confidence 011122334555544 89999865 347888876655
No 282
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=32.55 E-value=4.1e+02 Score=26.87 Aligned_cols=66 Identities=12% Similarity=0.068 Sum_probs=36.0
Q ss_pred CEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEE-C--CcEEEEEccCCCCCCCCeEEEEEC
Q 001895 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV-G--QRYLMAIGGNDGKRPLADVWALDT 261 (999)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~-~--~~~Lyv~GG~~g~~~~ndv~~yDl 261 (999)
+.+++.|+. ...+.+||+.+....|..+... ......-..+.+ . ++.+++.|+.++ .+..||+
T Consensus 23 ~~~l~~~~~------dg~i~iw~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~d~~~l~s~~~dg-----~v~vwd~ 88 (351)
T 3f3f_A 23 GRHVATCSS------DQHIKVFKLDKDTSNWELSDSW---RAHDSSIVAIDWASPEYGRIIASASYDK-----TVKLWEE 88 (351)
T ss_dssp SSEEEEEET------TSEEEEEEECSSSCCEEEEEEE---ECCSSCEEEEEECCGGGCSEEEEEETTS-----CEEEEEE
T ss_pred CCEEEEeeC------CCeEEEEECCCCCCcceeccee---ccCCCcEEEEEEcCCCCCCEEEEEcCCC-----eEEEEec
Confidence 455566653 2478899988654455554421 112222222333 2 235777888765 4677777
Q ss_pred CCC
Q 001895 262 AAK 264 (999)
Q Consensus 262 ~s~ 264 (999)
.+.
T Consensus 89 ~~~ 91 (351)
T 3f3f_A 89 DPD 91 (351)
T ss_dssp CTT
T ss_pred CCC
Confidence 653
No 283
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=32.02 E-value=5.4e+02 Score=28.16 Aligned_cols=193 Identities=13% Similarity=0.093 Sum_probs=95.6
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~ 227 (999)
+.++++|+.++.-..+...+ ...+ .+.. ++.||+....+. ..++++|..+.. ....+.... .+..
T Consensus 152 ~~I~~id~~~g~~~~~~~~~-----~~~~-ia~~~~g~~l~~~d~~~~-----~~I~~~d~~~~~-~~~~~g~~~-~~~~ 218 (409)
T 3hrp_A 152 PRVRLISVDDNKVTTVHPGF-----KGGK-PAVTKDKQRVYSIGWEGT-----HTVYVYMKASGW-APTRIGQLG-STFS 218 (409)
T ss_dssp TEEEEEETTTTEEEEEEETC-----CBCB-CEECTTSSEEEEEBSSTT-----CEEEEEEGGGTT-CEEEEEECC-TTSC
T ss_pred CcEEEEECCCCEEEEeeccC-----CCCc-eeEecCCCcEEEEecCCC-----ceEEEEEcCCCc-eeEEeeecc-chhc
Confidence 36788888887766654332 1123 3332 346776654221 279999987642 222331111 1122
Q ss_pred CcccEEEEEC-CcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccc-e-EEEEEe-CCEEEEEeccCCC
Q 001895 228 RYGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMY-A-TASARS-DGLLLLCGGRDAS 303 (999)
Q Consensus 228 R~~h~~~v~~-~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~-~-~a~~~~-~~~LyvfGG~~~~ 303 (999)
..-+++++.. ++.||+... ...+++||+.+. ....+............ . ..++.. ++.||+....
T Consensus 219 ~~p~~iav~p~~g~lyv~d~------~~~I~~~d~~~~--~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~--- 287 (409)
T 3hrp_A 219 GKIGAVALDETEEWLYFVDS------NKNFGRFNVKTQ--EVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN--- 287 (409)
T ss_dssp SCCCBCEECTTSSEEEEECT------TCEEEEEETTTC--CEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT---
T ss_pred CCcEEEEEeCCCCeEEEEEC------CCcEEEEECCCC--CEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC---
Confidence 3334555554 558998432 237999999877 44443211111111111 1 222233 6899987432
Q ss_pred CCCcccEEEEecCCCCeEEEEECCC----CCC----CC--cceeEEEEE-CCEEEEEcC-cCCCCCCcccCCeEEEEECC
Q 001895 304 SVPLASAYGLAKHRDGRWEWAIAPG----VSP----SP--RYQHAAVFV-NARLHVSGG-ALGGGRMVEDSSSVAVLDTA 371 (999)
Q Consensus 304 ~~~~~d~~~~~~~~~~~W~w~~~~g----~~P----~~--R~~hsav~~-~~~L~V~GG-~~~~~~~~~~~~~v~vyD~~ 371 (999)
...++.++.... .....-.. ... .. ..-.++++- ++.|||.-. . ...|.+||+.
T Consensus 288 ---~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~---------~~~I~~~~~~ 353 (409)
T 3hrp_A 288 ---LSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFK---------GYCLRKLDIL 353 (409)
T ss_dssp ---TTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTT---------TCEEEEEETT
T ss_pred ---CCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCC---------CCEEEEEECC
Confidence 235666654422 22111111 000 00 112233333 467998843 2 3569999987
Q ss_pred CCeEEEccc
Q 001895 372 AGVWCDTKS 380 (999)
Q Consensus 372 t~~W~~v~~ 380 (999)
+++...+..
T Consensus 354 ~G~v~~~~g 362 (409)
T 3hrp_A 354 DGYVSTVAG 362 (409)
T ss_dssp TTEEEEEEE
T ss_pred CCEEEEEeC
Confidence 887666543
No 284
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=32.00 E-value=1.5e+02 Score=34.74 Aligned_cols=81 Identities=20% Similarity=0.291 Sum_probs=51.8
Q ss_pred cCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCC
Q 001895 200 AEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPP 279 (999)
Q Consensus 200 ~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~ 279 (999)
...++.+|+.+.+..|+... +.+..+-.++..++ .+|+ |..+ ..++.||..+....|+.-.+.+.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~-----~~~~~~g~~~tagg-lvf~-g~~d-----g~l~A~D~~tG~~lW~~~~~~g~--- 529 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKE-----HLPLWAGVLATAGN-LVFT-GTGD-----GYFKAFDAKSGKELWKFQTGSGI--- 529 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEE-----SSCCCSCCEEETTT-EEEE-ECTT-----SEEEEEETTTCCEEEEEECSSCC---
T ss_pred cceEEEEECCCCCEEEEecC-----CCCCcccceEeCCC-EEEE-ECCC-----CcEEEEECCCCCEEEEecCCCCc---
Confidence 35689999998777898764 22344444444444 5665 5444 37899999998778987654332
Q ss_pred CccceEEEEEeCCEEEEE
Q 001895 280 PCMYATASARSDGLLLLC 297 (999)
Q Consensus 280 ~r~~~~a~~~~~~~Lyvf 297 (999)
....++...+++.||.
T Consensus 530 --~a~P~~y~~~G~qYv~ 545 (582)
T 1flg_A 530 --VSPPITWEQDGEQYLG 545 (582)
T ss_dssp --CSCCEEEEETTEEEEE
T ss_pred --ccCceEEEECCEEEEE
Confidence 1222333468988886
No 285
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=32.00 E-value=3.7e+02 Score=29.35 Aligned_cols=26 Identities=19% Similarity=0.216 Sum_probs=16.5
Q ss_pred EEEECC-cEEEEEccCCCCCCCCeEEEEECCC
Q 001895 233 MALVGQ-RYLMAIGGNDGKRPLADVWALDTAA 263 (999)
Q Consensus 233 ~~v~~~-~~Lyv~GG~~g~~~~ndv~~yDl~s 263 (999)
++...+ +.+++.|+.++ .+..||+.+
T Consensus 134 l~~~p~~~~~lat~~~dg-----~V~vwd~~~ 160 (430)
T 2xyi_A 134 ARYMPQNACVIATKTPSS-----DVLVFDYTK 160 (430)
T ss_dssp EEEETTEEEEEEEECSSS-----CEEEEEGGG
T ss_pred EEECCCCCcEEEEECCCC-----cEEEEECCC
Confidence 334443 46777777665 588888865
No 286
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=30.76 E-value=4.8e+02 Score=27.22 Aligned_cols=147 Identities=14% Similarity=0.076 Sum_probs=73.6
Q ss_pred CEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCC
Q 001895 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
+.+|+.+.. ...+++||+.+. +...+. .+ ..-++++...++.+|+... ..+++||+.+.
T Consensus 61 ~~l~~~d~~------~~~i~~~d~~~~--~~~~~~----~~--~~v~~i~~~~dg~l~v~~~-------~gl~~~d~~~g 119 (326)
T 2ghs_A 61 GTAWWFNIL------ERELHELHLASG--RKTVHA----LP--FMGSALAKISDSKQLIASD-------DGLFLRDTATG 119 (326)
T ss_dssp TEEEEEEGG------GTEEEEEETTTT--EEEEEE----CS--SCEEEEEEEETTEEEEEET-------TEEEEEETTTC
T ss_pred CEEEEEECC------CCEEEEEECCCC--cEEEEE----CC--CcceEEEEeCCCeEEEEEC-------CCEEEEECCCC
Confidence 567777543 247999998874 233332 12 1223333444447777541 35999999888
Q ss_pred CceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-C
Q 001895 265 PYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-N 343 (999)
Q Consensus 265 ~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~ 343 (999)
+++.+..........+....+.-.++++|+.............+|.++ +++....... .....+.++. +
T Consensus 120 --~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~---~g~~~~~~~~-----~~~~~~i~~s~d 189 (326)
T 2ghs_A 120 --VLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA---KGKVTKLFAD-----ISIPNSICFSPD 189 (326)
T ss_dssp --CEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE---TTEEEEEEEE-----ESSEEEEEECTT
T ss_pred --cEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe---CCcEEEeeCC-----CcccCCeEEcCC
Confidence 666554321111111222233334677877432211112345678887 2444332111 0112233443 3
Q ss_pred C-EEEEEcCcCCCCCCcccCCeEEEEECC
Q 001895 344 A-RLHVSGGALGGGRMVEDSSSVAVLDTA 371 (999)
Q Consensus 344 ~-~L~V~GG~~~~~~~~~~~~~v~vyD~~ 371 (999)
+ .||+.... .+.|++||..
T Consensus 190 g~~lyv~~~~---------~~~I~~~d~~ 209 (326)
T 2ghs_A 190 GTTGYFVDTK---------VNRLMRVPLD 209 (326)
T ss_dssp SCEEEEEETT---------TCEEEEEEBC
T ss_pred CCEEEEEECC---------CCEEEEEEcc
Confidence 4 57776432 3569999975
No 287
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=28.48 E-value=5.9e+02 Score=27.53 Aligned_cols=147 Identities=16% Similarity=0.147 Sum_probs=74.0
Q ss_pred CCEEEEEcccCCCCCCcCcEEEEecCCCCC-ceEEEeecCCCCCCCccc-EEEEEC-CcEEEEEccCCCCCCCCeEEEEE
Q 001895 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRP-RWHRVVVQGPGPGPRYGH-VMALVG-QRYLMAIGGNDGKRPLADVWALD 260 (999)
Q Consensus 184 g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~-kW~~v~~~g~~P~~R~~h-~~~v~~-~~~Lyv~GG~~g~~~~ndv~~yD 260 (999)
.+.+||.+.... ..|++++++.... -|-.-. +....|.+. ++++.. +..|++..+ . ..+++||
T Consensus 147 ~GnaYVt~s~~~-----~~I~rV~pdG~~~~~~~~~~---~~~~~~~G~nGIv~~pdg~~Liv~~~-~-----g~L~~fD 212 (334)
T 2p9w_A 147 DGNSYVAFALGM-----PAIARVSADGKTVSTFAWES---GNGGQRPGYSGITFDPHSNKLIAFGG-P-----RALTAFD 212 (334)
T ss_dssp TSCEEEEEEESS-----CEEEEECTTSCCEEEEEECC---CCSSSCCSCSEEEEETTTTEEEEESS-S-----SSEEEEE
T ss_pred CCCEEEeCCCCC-----CeEEEEeCCCCEEeeeeecC---CCcccccCcceEEEeCCCCEEEEEcC-C-----CeEEEEc
Confidence 458999765421 4599999886421 143221 223345444 444552 446777765 3 3699999
Q ss_pred CCCCCceEEEcccC--CCC-CCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCC---Cc
Q 001895 261 TAAKPYEWRKLEPE--GEG-PPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPS---PR 334 (999)
Q Consensus 261 l~s~~~~W~~v~~~--~~~-P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~---~R 334 (999)
+.+. ..| .++.. +.. ...........-.+++++++.-. .+..+.+... ++ |.-....+..|. ++
T Consensus 213 ~~~p-v~~-~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~------~~~~~~l~S~-Dg-W~sa~~~g~~~~~~~~~ 282 (334)
T 2p9w_A 213 VSKP-YAW-PEPVKINGDFGTLSGTEKIVTVPVGNESVLVGAR------APYAISFRSW-DN-WKSANIKKTKRSELQNS 282 (334)
T ss_dssp CSSS-SCC-CEECEESSCCCCCTTEEEEEEEEETTEEEEEEEE------TTEEEEEECS-ST-TSEEEEEEEECGGGGSS
T ss_pred CCCC-cce-eecccccCCcccccCcccccccccCCEEEEEEcC------CCCEEEEECC-CC-cceeEEeeeecCccccC
Confidence 9743 344 22211 110 00111111123357777555432 1234444333 43 765555443333 34
Q ss_pred ceeEEEE----ECCEEEEEcCcCC
Q 001895 335 YQHAAVF----VNARLHVSGGALG 354 (999)
Q Consensus 335 ~~hsav~----~~~~L~V~GG~~~ 354 (999)
...++++ .+++||++.++-.
T Consensus 283 g~tt~t~~~~~~~~~iYvv~~~f~ 306 (334)
T 2p9w_A 283 GFTAVADYYQGSEQGLYAVSAFFD 306 (334)
T ss_dssp CEEEEEEEEETTEEEEEEEECCGG
T ss_pred ceeEEEEeccccCCeEEEEeeecC
Confidence 4444444 5789999987643
No 288
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=28.48 E-value=5.2e+02 Score=26.87 Aligned_cols=203 Identities=11% Similarity=0.023 Sum_probs=101.9
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeec---CCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ---GPGP 225 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~---g~~P 225 (999)
+.++++|+.+.+.......+ .-..-+.+++. ++.+|+.... ...+++||.......-..+... |...
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~---~~~~p~gia~d~~g~l~v~d~~------~~~v~~~~~~g~~~~~~~~~~~~~~g~~~ 139 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKN---LFYLPHGLSIDTDGNYWVTDVA------LHQVFKLDPHSKEGPLLILGRSMQPGSDQ 139 (329)
T ss_dssp CCEEEECTTTCCEEEEECTT---TCSSEEEEEECTTSCEEEEETT------TTEEEEECTTCSSCCSEEESBTTBCCCST
T ss_pred CcEEEEECCCCeEEeccCCC---ccCCceEEEECCCCCEEEEECC------CCEEEEEeCCCCeEEEEEecccCCCCCCc
Confidence 57999999887765443221 11122344444 4578887643 2578999987541011222111 1101
Q ss_pred CCC-cccEEEEEC-CcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCC----CCCccceEEEEE-eC-CEEEEE
Q 001895 226 GPR-YGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEG----PPPCMYATASAR-SD-GLLLLC 297 (999)
Q Consensus 226 ~~R-~~h~~~v~~-~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~----P~~r~~~~a~~~-~~-~~Lyvf 297 (999)
... .-..+++.. ++.|||..+.. .+.+.+||.... .-..+...+.. +.....-..+++ .+ +.||+.
T Consensus 140 ~~~~~P~~ia~~~~~g~lyv~d~~~----~~~I~~~~~~g~--~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~ 213 (329)
T 3fvz_A 140 NHFCQPTDVAVEPSTGAVFVSDGYC----NSRIVQFSPSGK--FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVA 213 (329)
T ss_dssp TCCSSEEEEEECTTTCCEEEEECSS----CCEEEEECTTSC--EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEE
T ss_pred cccCCCcEEEEeCCCCeEEEEeCCC----CCeEEEEcCCCC--EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEE
Confidence 111 223444443 45899987521 247899996543 22223221111 111111223333 34 899998
Q ss_pred eccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEE
Q 001895 298 GGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (999)
Q Consensus 298 GG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~ 377 (999)
...+ ..+..|+.. ++++....... .....-.++++..+.+|+..|...-.. .....+.++|+.+++...
T Consensus 214 d~~~------~~I~~~~~~-~G~~~~~~~~~--~~~~~~~~~~~~pg~~~~~~g~~~v~~--~~~~~v~~~~~~~g~~~~ 282 (329)
T 3fvz_A 214 DREN------GRIQCFKTD-TKEFVREIKHA--SFGRNVFAISYIPGFLFAVNGKPYFGD--QEPVQGFVMNFSSGEIID 282 (329)
T ss_dssp ETTT------TEEEEEETT-TCCEEEEECCT--TTTTCEEEEEEETTEEEEEECCCCTTC--SCCCCEEEEETTTCCEEE
T ss_pred ECCC------CEEEEEECC-CCcEEEEEecc--ccCCCcceeeecCCEEEEeCCCEEecc--CCCcEEEEEEcCCCeEEE
Confidence 6432 345666655 34444333221 122222345555688888877532211 124579999998887665
Q ss_pred c
Q 001895 378 T 378 (999)
Q Consensus 378 v 378 (999)
.
T Consensus 283 ~ 283 (329)
T 3fvz_A 283 V 283 (329)
T ss_dssp E
T ss_pred E
Confidence 4
No 289
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=28.48 E-value=5.2e+02 Score=26.86 Aligned_cols=64 Identities=13% Similarity=-0.022 Sum_probs=39.0
Q ss_pred CEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCC
Q 001895 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
+.+++.|+.+ ..+.+||+.+.. -.... .......-.+++...++.+++.|+.++ .+..||+.+.
T Consensus 139 ~~~l~s~s~d------g~i~~wd~~~~~--~~~~~---~~~~~~~i~~~~~~pdg~~lasg~~dg-----~i~iwd~~~~ 202 (343)
T 3lrv_A 139 TEYFIWADNR------GTIGFQSYEDDS--QYIVH---SAKSDVEYSSGVLHKDSLLLALYSPDG-----ILDVYNLSSP 202 (343)
T ss_dssp CCEEEEEETT------CCEEEEESSSSC--EEEEE---CCCSSCCCCEEEECTTSCEEEEECTTS-----CEEEEESSCT
T ss_pred CCEEEEEeCC------CcEEEEECCCCc--EEEEE---ecCCCCceEEEEECCCCCEEEEEcCCC-----EEEEEECCCC
Confidence 4566667642 578999998753 32222 111222233445555557888888776 6888999876
No 290
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=28.27 E-value=4.4e+02 Score=25.98 Aligned_cols=110 Identities=11% Similarity=0.136 Sum_probs=56.8
Q ss_pred CCEEEEEcccCCCCCCcCcEEEEecCCCCCce-EEEeecC-CCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEEC
Q 001895 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRW-HRVVVQG-PGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDT 261 (999)
Q Consensus 184 g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW-~~v~~~g-~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl 261 (999)
++++|+|-| +.+|+|+-.+....+ ..+...+ .+|......+.....++++|+|-| +..|+||.
T Consensus 61 ~g~~yfFkg--------~~yw~~~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG-------~~yw~yd~ 125 (196)
T 3c7x_A 61 DGKFVFFKG--------DKHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRG-------NKYYRFNE 125 (196)
T ss_dssp TSCEEEEET--------TEEEEEETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEET-------TEEEEEET
T ss_pred CCcEEEecC--------CEEEEEeCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEEC-------CEEEEEeC
Confidence 568999977 468888754311111 1222111 244334444433333458999977 46899998
Q ss_pred CCCCceE---EEcccCCCCCCCccceEEEEEeCC-EEEEEeccCCCCCCcccEEEEecCCC
Q 001895 262 AAKPYEW---RKLEPEGEGPPPCMYATASARSDG-LLLLCGGRDASSVPLASAYGLAKHRD 318 (999)
Q Consensus 262 ~s~~~~W---~~v~~~~~~P~~r~~~~a~~~~~~-~LyvfGG~~~~~~~~~d~~~~~~~~~ 318 (999)
.+..+.- ..+..-...| ..-.+|....++ ++|+|-| ...|.|+..+.
T Consensus 126 ~~~~v~~gyPk~i~~~~gip--~~idaAf~~~~~~~~YfFkg--------~~y~r~d~~~~ 176 (196)
T 3c7x_A 126 ELRAVDSEYPKNIKVWEGIP--ESPRGSFMGSDEVFTYFYKG--------NKYWKFNNQKL 176 (196)
T ss_dssp TTTEECTTCSEEGGGSBTCC--SSCSEEEECTTSSEEEEEET--------TEEEEEETTTT
T ss_pred CcccccCCCCccHHHCCCcC--CCcceeEEecCCCEEEEEEC--------CEEEEEECCcc
Confidence 7751110 1122111111 223444444354 9999966 34677776544
No 291
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=27.79 E-value=7e+02 Score=28.10 Aligned_cols=156 Identities=9% Similarity=0.009 Sum_probs=79.8
Q ss_pred EEEEeCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecC---CCCCCCcccEEEEEC-CcEEEEEccCCCCCCCC
Q 001895 179 VATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG---PGPGPRYGHVMALVG-QRYLMAIGGNDGKRPLA 254 (999)
Q Consensus 179 sa~~~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g---~~P~~R~~h~~~v~~-~~~Lyv~GG~~g~~~~n 254 (999)
+++.+.+.+|+|=|. -+|+++.... .+....+.. .+|.. .. ++.... ++++|+|=| +
T Consensus 267 Ai~~~~ge~y~Fkg~--------~~wr~~~~~~--~~~p~~I~~~Wp~LP~~-iD-Aa~~~~~~g~~~fFKg-------~ 327 (450)
T 1su3_A 267 AITTIRGEVMFFKDR--------FYMRTNPFYP--EVELNFISVFWPQLPNG-LE-AAYEFADRDEVRFFKG-------N 327 (450)
T ss_dssp EEEEETTEEEEEETT--------EEEECCTTSS--SCEEEEGGGTCTTSCSS-CC-EEEEEGGGTEEEEEET-------T
T ss_pred eEEecCCeEEEEeCC--------EEEEEcCCCC--cccceehhHhccCCCCC-ee-EEEEEcCCCeEEEEeC-------C
Confidence 566678899999773 4666665432 233222221 23322 22 222222 348999876 3
Q ss_pred eEEEEECCCCCceE-EEcc-cCCCCCCCccceEEEEEe-CCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCC--
Q 001895 255 DVWALDTAAKPYEW-RKLE-PEGEGPPPCMYATASARS-DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGV-- 329 (999)
Q Consensus 255 dv~~yDl~s~~~~W-~~v~-~~~~~P~~r~~~~a~~~~-~~~LyvfGG~~~~~~~~~d~~~~~~~~~~~W~w~~~~g~-- 329 (999)
.+|+|+-.+....+ ..+. ..+-+..+..-.+|.... ++++|+|-| +..|.|+.... + ..++.
T Consensus 328 ~~W~~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG--------~~yw~yd~~~~---~--~~~gYPk 394 (450)
T 1su3_A 328 KYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVA--------NKYWRYDEYKR---S--MDPGYPK 394 (450)
T ss_dssp EEEEEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEET--------TEEEEEETTTT---E--ECSSCSE
T ss_pred EEEEecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeC--------CEEEEEeCCCc---c--ccCCCCc
Confidence 67888743210001 1111 111111112334444433 689999966 35677765432 1 11111
Q ss_pred ------CCCCcceeEEEEECCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEE
Q 001895 330 ------SPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (999)
Q Consensus 330 ------~P~~R~~hsav~~~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~ 377 (999)
+-.+..-.+++..++++|.|=| +..|.||..+.+-..
T Consensus 395 ~I~~~fpgip~~iDAA~~~~g~~YFFkg-----------~~ywr~d~~~~~v~~ 437 (450)
T 1su3_A 395 MIAHDFPGIGHKVDAVFMKDGFFYFFHG-----------TRQYKFDPKTKRILT 437 (450)
T ss_dssp EHHHHSTTSCSCCSEEEEETTEEEEEET-----------TEEEEEETTTTEEEE
T ss_pred chhhcCCCCCCCccEEEEcCCeEEEEeC-----------CEEEEEECCcceEec
Confidence 1122233455567899999966 348899988876544
No 292
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=27.74 E-value=5.4e+02 Score=26.82 Aligned_cols=101 Identities=11% Similarity=0.064 Sum_probs=53.0
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEE-eCCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCC-CCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATA-VGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGP-GPGP 227 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~-~g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~-~P~~ 227 (999)
..+++||+.+++...+.. +. .-++.+. -++.+++... +.+++||+.+. ++..+..... .+..
T Consensus 71 ~~i~~~d~~~~~~~~~~~----~~--~v~~i~~~~dg~l~v~~~--------~gl~~~d~~~g--~~~~~~~~~~~~~~~ 134 (326)
T 2ghs_A 71 RELHELHLASGRKTVHAL----PF--MGSALAKISDSKQLIASD--------DGLFLRDTATG--VLTLHAELESDLPGN 134 (326)
T ss_dssp TEEEEEETTTTEEEEEEC----SS--CEEEEEEEETTEEEEEET--------TEEEEEETTTC--CEEEEECSSTTCTTE
T ss_pred CEEEEEECCCCcEEEEEC----CC--cceEEEEeCCCeEEEEEC--------CCEEEEECCCC--cEEEEeeCCCCCCCC
Confidence 478999999887665532 11 1222332 3567777542 35999998775 3665542111 1111
Q ss_pred CcccEEEEECCcEEEEEccC-CCCCCCCeEEEEECCCCCceEEEc
Q 001895 228 RYGHVMALVGQRYLMAIGGN-DGKRPLADVWALDTAAKPYEWRKL 271 (999)
Q Consensus 228 R~~h~~~v~~~~~Lyv~GG~-~g~~~~ndv~~yDl~s~~~~W~~v 271 (999)
+. ..+++-.++.+|+.... ........+|+|| +. +...+
T Consensus 135 ~~-~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g--~~~~~ 174 (326)
T 2ghs_A 135 RS-NDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KG--KVTKL 174 (326)
T ss_dssp EE-EEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TT--EEEEE
T ss_pred CC-CCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CC--cEEEe
Confidence 22 23333444467764321 1122346799999 45 55544
No 293
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=27.24 E-value=7.2e+02 Score=28.11 Aligned_cols=95 Identities=12% Similarity=0.057 Sum_probs=48.3
Q ss_pred cEEEEecCCCCCceEEEeecCCCCCCCcccEEEE-ECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCC
Q 001895 202 DLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMAL-VGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPP 280 (999)
Q Consensus 202 dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v-~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~ 280 (999)
.+.+||+.+. +...+... +. ...+. -++ +.+++++.+... ..++|++|+.+. ++..+.....
T Consensus 133 ~~~l~d~~~g--~~~~l~~~---~~----~~~~~spDG-~~la~~~~~~~~-~~~i~~~d~~~g--~~~~l~~~~~---- 195 (582)
T 3o4h_A 133 RVALYALDGG--GLRELARL---PG----FGFVSDIRG-DLIAGLGFFGGG-RVSLFTSNLSSG--GLRVFDSGEG---- 195 (582)
T ss_dssp CEEEEEEETT--EEEEEEEE---SS----CEEEEEEET-TEEEEEEEEETT-EEEEEEEETTTC--CCEEECCSSC----
T ss_pred CceEEEccCC--cEEEeecC---CC----ceEEECCCC-CEEEEEEEcCCC-CeEEEEEcCCCC--CceEeecCCC----
Confidence 4557888774 35555421 22 22222 233 455555443221 245999999888 6666643321
Q ss_pred ccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCC
Q 001895 281 CMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRD 318 (999)
Q Consensus 281 r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~ 318 (999)
.....+...+|+.++.+..++ ...++.++..+.
T Consensus 196 -~~~~~~~SpDG~~l~~~~~~~----~~~i~~~d~~~~ 228 (582)
T 3o4h_A 196 -SFSSASISPGMKVTAGLETAR----EARLVTVDPRDG 228 (582)
T ss_dssp -EEEEEEECTTSCEEEEEECSS----CEEEEEECTTTC
T ss_pred -ccccceECCCCCEEEEccCCC----eeEEEEEcCCCC
Confidence 222333344666555443322 245777766543
No 294
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=27.17 E-value=4.3e+02 Score=28.78 Aligned_cols=19 Identities=16% Similarity=0.076 Sum_probs=15.2
Q ss_pred cceEEEEEeCCEEEEEecc
Q 001895 282 MYATASARSDGLLLLCGGR 300 (999)
Q Consensus 282 ~~~~a~~~~~~~LyvfGG~ 300 (999)
..|+.+...++++|.+|-.
T Consensus 116 ~~h~~al~~~G~v~~wG~n 134 (389)
T 3kci_A 116 GKHCLALSSEGEVYSWGEA 134 (389)
T ss_dssp CSEEEEEETTSCEEEEECC
T ss_pred CCeEEEEcCCCCEEEEeCC
Confidence 4677777789999999864
No 295
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=25.97 E-value=7.3e+02 Score=27.71 Aligned_cols=123 Identities=10% Similarity=0.069 Sum_probs=55.3
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
..+..+|........+.... .. -.+++.. ++..++.|+.+ ..+.+||..... -..+. + . ..
T Consensus 284 ~~i~~w~~~~~~~~~~~~h~----~~-v~~~~~~~~~~~l~t~~~d------~~i~~w~~~~~~--~~~~~--~--~-~~ 345 (577)
T 2ymu_A 284 KTVKLWNRNGQLLQTLTGHS----SS-VWGVAFSPDGQTIASASDD------KTVKLWNRNGQH--LQTLT--G--H-SS 345 (577)
T ss_dssp SCEEEEETTSCEEEEECCCS----SC-EEEEEECTTSSEEEEEETT------SCEEEEETTSCE--EEEEC--C--C-SS
T ss_pred CEEEEEeCCCcEEEEEecCC----CC-eEEEEECCCCCEEEEEeCC------CeEEEEeCCCCe--eEEEe--C--C-CC
Confidence 35666776554444443211 00 1122222 34555555532 457788876531 22221 1 1 11
Q ss_pred cccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCC
Q 001895 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (999)
Q Consensus 229 ~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~ 302 (999)
.-.+++...++..++.|+.++ .+..||.... .-..+..... .-...+...++++++.|+.++
T Consensus 346 ~v~~~~~s~~g~~l~~~~~dg-----~v~~~~~~~~--~~~~~~~~~~-----~v~~~~~s~dg~~l~~~~~d~ 407 (577)
T 2ymu_A 346 SVWGVAFSPDGQTIASASDDK-----TVKLWNRNGQ--LLQTLTGHSS-----SVRGVAFSPDGQTIASASDDK 407 (577)
T ss_dssp CEEEEEECTTSSEEEEEETTS-----EEEEEETTCC--EEEEEECCSS-----CEEEEEECTTSSCEEEEETTS
T ss_pred CEEEEEECCCCCEEEEEeCCC-----EEEEEcCCCC--EEEEecCCCC-----CeEEEEECCCCCEEEEEeCCC
Confidence 112333344445677777654 4677786544 3333322111 111122234667777776543
No 296
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=25.51 E-value=1.3e+02 Score=33.52 Aligned_cols=105 Identities=12% Similarity=0.039 Sum_probs=55.5
Q ss_pred ccCeEEEEECCCCc------EEEecC----CCCCCCCCcCcEEEEeCCEEEEEc---ccCCCCCCcCcEEEEecCCCCCc
Q 001895 148 ATADVHCYDVLTNK------WSRITP----FGEPPTPRAAHVATAVGTMVVIQG---GIGPAGLSAEDLHVLDLTQQRPR 214 (999)
Q Consensus 148 ~~~dv~~yD~~t~~------W~~l~~----~g~~P~pR~~hsa~~~g~~iyv~G---G~~~~~~~~~dv~vyD~~t~t~k 214 (999)
....++.+|..+.. |..... .+-.|......+...-++++|+.- +.+.+....+.++++|+.+.+ .
T Consensus 245 ~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~k-v 323 (386)
T 3sjl_D 245 YTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE-R 323 (386)
T ss_dssp TTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC-E
T ss_pred CCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCe-E
Confidence 44678888886553 431110 010122222222222356999963 322333345789999999853 2
Q ss_pred eEEEeecCCCCCCCcccEEEEECCc--EEEEEccCCCCCCCCeEEEEECCCC
Q 001895 215 WHRVVVQGPGPGPRYGHVMALVGQR--YLMAIGGNDGKRPLADVWALDTAAK 264 (999)
Q Consensus 215 W~~v~~~g~~P~~R~~h~~~v~~~~--~Lyv~GG~~g~~~~ndv~~yDl~s~ 264 (999)
-.++ +.+..-+++.+-.++ .||+.-+. .+++.+||..+.
T Consensus 324 ~~~i------~vg~~~~~lavs~D~~~~ly~tn~~-----~~~VsViD~~t~ 364 (386)
T 3sjl_D 324 LAKF------EMGHEIDSINVSQDEKPLLYALSTG-----DKTLYIHDAESG 364 (386)
T ss_dssp EEEE------EEEEEECEEEECSSSSCEEEEEETT-----TTEEEEEETTTC
T ss_pred EEEE------ECCCCcceEEECCCCCeEEEEEcCC-----CCeEEEEECCCC
Confidence 2222 233334445454332 56765432 358999999887
No 297
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=25.46 E-value=6.5e+02 Score=26.96 Aligned_cols=144 Identities=11% Similarity=0.039 Sum_probs=0.0
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe--CCEEEEE
Q 001895 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQ 190 (999)
Q Consensus 113 ~~~LyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--g~~iyv~ 190 (999)
++.+++.|+ ....+.+||+.+.+-...-.. +.....-.++.+ ++.+++.
T Consensus 181 ~~~~l~~~~--------------------------~d~~i~iwd~~~~~~~~~~~~---~~h~~~v~~~~~s~~~~~l~s 231 (437)
T 3gre_A 181 EKSLLVALT--------------------------NLSRVIIFDIRTLERLQIIEN---SPRHGAVSSICIDEECCVLIL 231 (437)
T ss_dssp SCEEEEEEE--------------------------TTSEEEEEETTTCCEEEEEEC---CGGGCCEEEEEECTTSCEEEE
T ss_pred CCCEEEEEe--------------------------CCCeEEEEeCCCCeeeEEEcc---CCCCCceEEEEECCCCCEEEE
Q ss_pred cccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEE----EEECCcEEEEEccCCCCCCCCeEEEEECCCCCc
Q 001895 191 GGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVM----ALVGQRYLMAIGGNDGKRPLADVWALDTAAKPY 266 (999)
Q Consensus 191 GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~----~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~ 266 (999)
|+.+ ..+.+||+.+.. ....- ..+....-.++ ..-.++.+++.|+.++ .+..||+.+...
T Consensus 232 ~~~d------g~i~iwd~~~~~--~~~~~---~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg-----~i~iwd~~~~~~ 295 (437)
T 3gre_A 232 GTTR------GIIDIWDIRFNV--LIRSW---SFGDHAPITHVEVCQFYGKNSVIVVGGSSKT-----FLTIWNFVKGHC 295 (437)
T ss_dssp EETT------SCEEEEETTTTE--EEEEE---BCTTCEEEEEEEECTTTCTTEEEEEEESTTE-----EEEEEETTTTEE
T ss_pred EcCC------CeEEEEEcCCcc--EEEEE---ecCCCCceEEEEeccccCCCccEEEEEcCCC-----cEEEEEcCCCcE
Q ss_pred eEEEcccCCCCC--------------------CCccceEEEEEeCCEEEEEeccCC
Q 001895 267 EWRKLEPEGEGP--------------------PPCMYATASARSDGLLLLCGGRDA 302 (999)
Q Consensus 267 ~W~~v~~~~~~P--------------------~~r~~~~a~~~~~~~LyvfGG~~~ 302 (999)
............ ........+.. ++.+++.||.++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~ 350 (437)
T 3gre_A 296 QYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATS 350 (437)
T ss_dssp EEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGT
T ss_pred EEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCC
No 298
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=25.28 E-value=3.4e+02 Score=30.75 Aligned_cols=106 Identities=9% Similarity=0.056 Sum_probs=54.2
Q ss_pred CCEEEEEcccCCCCCCcCcEEEEecCCCCCce-EEEe-ecCCCCC--CCcccEEEEECCcEEEEEccCCCCCCCCeEEEE
Q 001895 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRW-HRVV-VQGPGPG--PRYGHVMALVGQRYLMAIGGNDGKRPLADVWAL 259 (999)
Q Consensus 184 g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW-~~v~-~~g~~P~--~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~y 259 (999)
++++|+|=| +.+|+|+-.+....+ ..+. .. ..|. .....+...-.++++|+|-| +..|+|
T Consensus 318 ~g~~~fFKg--------~~~W~~~~~~~~~gyP~~i~~~~-g~P~~~~~IDAA~~~~~~~k~yfFkG-------~~yw~y 381 (450)
T 1su3_A 318 RDEVRFFKG--------NKYWAVQGQNVLHGYPKDIYSSF-GFPRTVKHIDAALSEENTGKTYFFVA-------NKYWRY 381 (450)
T ss_dssp GTEEEEEET--------TEEEEEETTEECTTCSEEHHHHH-CCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEE
T ss_pred CCeEEEEeC--------CEEEEecCCcccCCCceeeehhh-cCCCCCCccceEEEEcCCCeEEEEeC-------CEEEEE
Confidence 579999977 467887743210011 1111 01 1332 22333333333458999977 479999
Q ss_pred ECCCCCceEE-----Ecc-cCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCC
Q 001895 260 DTAAKPYEWR-----KLE-PEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRD 318 (999)
Q Consensus 260 Dl~s~~~~W~-----~v~-~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~ 318 (999)
|..+. +-. .+. ..+..| ..-. |+...++++|+|-| +..|+|+..+.
T Consensus 382 d~~~~--~~~~gYPk~I~~~fpgip--~~iD-AA~~~~g~~YFFkg--------~~ywr~d~~~~ 433 (450)
T 1su3_A 382 DEYKR--SMDPGYPKMIAHDFPGIG--HKVD-AVFMKDGFFYFFHG--------TRQYKFDPKTK 433 (450)
T ss_dssp ETTTT--EECSSCSEEHHHHSTTSC--SCCS-EEEEETTEEEEEET--------TEEEEEETTTT
T ss_pred eCCCc--cccCCCCcchhhcCCCCC--CCcc-EEEEcCCeEEEEeC--------CEEEEEECCcc
Confidence 98654 211 111 111111 2223 33346899999966 34577776544
No 299
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=24.81 E-value=5.4e+02 Score=25.82 Aligned_cols=65 Identities=9% Similarity=0.134 Sum_probs=36.0
Q ss_pred CCEEEEEcccCCCCCCcCcEEEEecCCCCCce-EEEeecCCCCCC-CcccEEEEE-CCcEEEEEccCCCCCCCCeEEEEE
Q 001895 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRW-HRVVVQGPGPGP-RYGHVMALV-GQRYLMAIGGNDGKRPLADVWALD 260 (999)
Q Consensus 184 g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW-~~v~~~g~~P~~-R~~h~~~v~-~~~~Lyv~GG~~g~~~~ndv~~yD 260 (999)
++++|+|=| +.+|+||-.+....+ ..+... ..|.. ..-.++... .++++|+|-| +..|+||
T Consensus 87 ~~k~yfFkG--------~~yW~y~~~~~~~gyPk~I~~~-g~p~~~~~IDAAf~~~~~g~~YfFkG-------~~ywr~d 150 (218)
T 1gen_A 87 EEKAVFFAG--------NEYWIYSASTLERGYPKPLTSL-GLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYN 150 (218)
T ss_dssp TTEEEEEET--------TEEEEEETTEECTTCSEEGGGG-TCCTTCCCCSEEEEETTTTEEEEEET-------TEEEEEE
T ss_pred CCEEEEEeC--------CEEEEEcCccccCCCCccHhhc-CCCCCcCCccEEEEEcCCCeEEEEEC-------CEEEEEE
Confidence 579999977 478999853211111 111111 22321 112233332 4458999977 4789999
Q ss_pred CCCC
Q 001895 261 TAAK 264 (999)
Q Consensus 261 l~s~ 264 (999)
..+.
T Consensus 151 ~~~~ 154 (218)
T 1gen_A 151 EVKK 154 (218)
T ss_dssp TTTT
T ss_pred Cccc
Confidence 8765
No 300
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=24.27 E-value=6.1e+02 Score=26.24 Aligned_cols=162 Identities=13% Similarity=0.113 Sum_probs=71.3
Q ss_pred EEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCC-
Q 001895 187 VVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKP- 265 (999)
Q Consensus 187 iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~- 265 (999)
+++.|+. ...+.+||+.+.. +..+...........-.+++...++.+++.|+.++ .+..||+....
T Consensus 26 ~las~~~------D~~i~lw~~~~~~--~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~-----~v~iw~~~~~~~ 92 (330)
T 2hes_X 26 ILATGST------DRKIKLVSVKYDD--FTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDS-----TVSIWAKEESAD 92 (330)
T ss_dssp EEEEEES------SSCEEEEECSSSC--CEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTS-----CEEEEEC-----
T ss_pred EEEEEcC------CCEEEEEEecCCC--eEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCC-----cEEEEEcccCcC
Confidence 5566654 2568889987642 33333210100111112233333446777888775 46667764320
Q ss_pred --ceEEEcccCCCCCCCccceEEE-EEeCCEEEEEeccCCCCCCcccEEEEecCCC-CeEEEEECCCCCCCCcceeEEEE
Q 001895 266 --YEWRKLEPEGEGPPPCMYATAS-ARSDGLLLLCGGRDASSVPLASAYGLAKHRD-GRWEWAIAPGVSPSPRYQHAAVF 341 (999)
Q Consensus 266 --~~W~~v~~~~~~P~~r~~~~a~-~~~~~~LyvfGG~~~~~~~~~d~~~~~~~~~-~~W~w~~~~g~~P~~R~~hsav~ 341 (999)
..+..+...... ...-.++ ...++.+++.|+.++. +..++.... ..+.....-.. ....-.++++
T Consensus 93 ~~~~~~~~~~~~~h---~~~V~~v~~sp~g~~las~s~D~~------v~iwd~~~~~~~~~~~~~~~~--h~~~v~~v~~ 161 (330)
T 2hes_X 93 RTFEMDLLAIIEGH---ENEVKGVAWSNDGYYLATCSRDKS------VWIWETDESGEEYECISVLQE--HSQDVKHVIW 161 (330)
T ss_dssp --CCCEEEEEEC-------CEEEEEECTTSCEEEEEETTSC------EEEEECCTTCCCCEEEEEECC--CSSCEEEEEE
T ss_pred ccccceeEEEEcCC---CCcEEEEEECCCCCEEEEEeCCCE------EEEEeccCCCCCeEEEEEecc--CCCceEEEEE
Confidence 122222111100 0111122 2236777788876543 223333111 12221111100 1111122333
Q ss_pred E-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEcccC
Q 001895 342 V-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (999)
Q Consensus 342 ~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v~~~ 381 (999)
. ++.+++.|+.++ .|.++|..+..|..+..+
T Consensus 162 ~p~~~~l~s~s~D~---------~i~iW~~~~~~~~~~~~~ 193 (330)
T 2hes_X 162 HPSEALLASSSYDD---------TVRIWKDYDDDWECVAVL 193 (330)
T ss_dssp CSSSSEEEEEETTS---------CEEEEEEETTEEEEEEEE
T ss_pred CCCCCEEEEEcCCC---------eEEEEECCCCCeeEEEEc
Confidence 2 567788887643 377788888878766554
No 301
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=22.74 E-value=8.6e+02 Score=27.45 Aligned_cols=59 Identities=8% Similarity=-0.035 Sum_probs=36.4
Q ss_pred CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCC
Q 001895 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (999)
Q Consensus 184 g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s 263 (999)
++++|+|-| +..|+||..+.+ ...-. -..+| .. -++....+ ++|+|-| +..|+||..+
T Consensus 158 ~~~~yfFkG--------~~yw~yd~~~~~--~~~~~-w~gi~--~i-DAA~~~~g-~~YfFkG-------~~y~rfd~~~ 215 (460)
T 1qhu_A 158 DEGILFFQG--------NRKWFWDLTTGT--KKERS-WPAVG--NC-TSALRWLG-RYYCFQG-------NQFLRFNPVS 215 (460)
T ss_dssp SSEEEEEET--------TEEEEEETTTTE--EEEEC-CTTSC--CC-SEEEEETT-EEEEEET-------TEEEEECTTT
T ss_pred CCeEEEEec--------ccEEEEecccce--eeccc-CCCCC--cc-chheeeCC-ceEEEEC-------CEEEEEcCcc
Confidence 568899987 478999987742 32211 01122 22 34444555 8999987 4678888755
Q ss_pred C
Q 001895 264 K 264 (999)
Q Consensus 264 ~ 264 (999)
.
T Consensus 216 ~ 216 (460)
T 1qhu_A 216 G 216 (460)
T ss_dssp C
T ss_pred C
Confidence 3
No 302
>3c0t_A Mediator of RNA polymerase II transcription subunit 18; beta barrel, channel, protein-protein complex, activator, nucleus; 2.40A {Schizosaccharomyces pombe}
Probab=22.69 E-value=59 Score=32.80 Aligned_cols=39 Identities=21% Similarity=0.473 Sum_probs=32.5
Q ss_pred eeCHHHHHHHHHHcCCcEEEEeccccccceEEecCCeEEEEe
Q 001895 881 TFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLF 922 (999)
Q Consensus 881 ~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvF 922 (999)
.+....+-+|++.+|+++ -||++..||.|..|+-.|+|+
T Consensus 103 ~~~sgdv~~fl~~lG~~~---~~EYv~~G~~f~~g~~kI~l~ 141 (207)
T 3c0t_A 103 KLTNGSVTEFVEKMGYEF---SHEYIIQGLEYFFFDTTVRIY 141 (207)
T ss_dssp EECSSCHHHHHHHTTEEE---EEEEEEEEEEEEETTEEEEEE
T ss_pred cccCCCHHHHHHHhCcce---EEEEEEeeeEEEeCCEEEEEE
Confidence 345556889999999996 499999999999999877765
No 303
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=22.31 E-value=7.1e+02 Score=26.32 Aligned_cols=183 Identities=7% Similarity=-0.081 Sum_probs=83.8
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
..+.++|+.+.+........ . . -.+++.- ++++++.|+. +.+.+++..+.. ..... ......
T Consensus 157 ~~i~iwd~~~~~~~~~~~~~---~-~-V~~v~fspdg~~l~s~s~-------~~~~~~~~~~~~--~~~~~---~~~~~~ 219 (365)
T 4h5i_A 157 AIMRIIDPSDLTEKFEIETR---G-E-VKDLHFSTDGKVVAYITG-------SSLEVISTVTGS--CIARK---TDFDKN 219 (365)
T ss_dssp CEEEEEETTTTEEEEEEECS---S-C-CCEEEECTTSSEEEEECS-------SCEEEEETTTCC--EEEEE---CCCCTT
T ss_pred CEEEEeECCCCcEEEEeCCC---C-c-eEEEEEccCCceEEeccc-------eeEEEEEeccCc--ceeee---ecCCCC
Confidence 46888999887655432211 1 1 1223332 4466666542 457778777642 22221 111111
Q ss_pred cc-cEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCc
Q 001895 229 YG-HVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPL 307 (999)
Q Consensus 229 ~~-h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~~ 307 (999)
.. .+++...++.+++.++.++.. ...++.+|+... .+..............-.+.+...++++++.|+.++.
T Consensus 220 ~~v~~v~fspdg~~l~~~s~d~~~-~~~i~~~~~~~~--~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~---- 292 (365)
T 4h5i_A 220 WSLSKINFIADDTVLIAASLKKGK-GIVLTKISIKSG--NTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNS---- 292 (365)
T ss_dssp EEEEEEEEEETTEEEEEEEESSSC-CEEEEEEEEETT--EEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSC----
T ss_pred CCEEEEEEcCCCCEEEEEecCCcc-eeEEeecccccc--eecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCE----
Confidence 11 122233344677777665432 234667777655 4432211000000011112223457888999887643
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECC
Q 001895 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTA 371 (999)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~ 371 (999)
+..++..+. +-......+. ...-.++++. ++++++.|+.++ .|.++|+.
T Consensus 293 --V~iwd~~~~-~~~~~~~~gH---~~~V~~v~fSpdg~~laS~S~D~---------tvrvw~ip 342 (365)
T 4h5i_A 293 --IALVKLKDL-SMSKIFKQAH---SFAITEVTISPDSTYVASVSAAN---------TIHIIKLP 342 (365)
T ss_dssp --EEEEETTTT-EEEEEETTSS---SSCEEEEEECTTSCEEEEEETTS---------EEEEEECC
T ss_pred --EEEEECCCC-cEEEEecCcc---cCCEEEEEECCCCCEEEEEeCCC---------eEEEEEcC
Confidence 344444432 2111111111 1111233333 678888887643 47777764
No 304
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=22.24 E-value=6.5e+02 Score=25.83 Aligned_cols=185 Identities=9% Similarity=0.013 Sum_probs=90.3
Q ss_pred eEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCc
Q 001895 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (999)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~ 229 (999)
.+++||+.... ......+ ..-++++.. ++++|+...... ...+++||..+. +...+. ..+..+.
T Consensus 54 ~I~~~d~~g~~-~~~~~~~-----~~p~gia~~~dG~l~vad~~~~----~~~v~~~d~~~g--~~~~~~---~~~~~~~ 118 (306)
T 2p4o_A 54 EIVSITPDGNQ-QIHATVE-----GKVSGLAFTSNGDLVATGWNAD----SIPVVSLVKSDG--TVETLL---TLPDAIF 118 (306)
T ss_dssp EEEEECTTCCE-EEEEECS-----SEEEEEEECTTSCEEEEEECTT----SCEEEEEECTTS--CEEEEE---ECTTCSC
T ss_pred eEEEECCCCce-EEEEeCC-----CCceeEEEcCCCcEEEEeccCC----cceEEEEcCCCC--eEEEEE---eCCCccc
Confidence 68889887643 3222221 123444444 346777653210 124888887664 365554 2344566
Q ss_pred ccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCc-eEEEcccCC--CCCCCccceEEEEEeCCEEEEEeccCCCCCC
Q 001895 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPY-EWRKLEPEG--EGPPPCMYATASARSDGLLLLCGGRDASSVP 306 (999)
Q Consensus 230 ~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~-~W~~v~~~~--~~P~~r~~~~a~~~~~~~LyvfGG~~~~~~~ 306 (999)
....+...++.+|+.--. ...+|++|+.+... .|..-.... ...............++.||+.-- .
T Consensus 119 ~~g~~~~~~~~~~v~d~~-----~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~------~ 187 (306)
T 2p4o_A 119 LNGITPLSDTQYLTADSY-----RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNT------E 187 (306)
T ss_dssp EEEEEESSSSEEEEEETT-----TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEET------T
T ss_pred cCcccccCCCcEEEEECC-----CCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeC------C
Confidence 566665666567775321 24899999876411 222111000 000001122223334567888632 2
Q ss_pred cccEEEEecCCCCeE---E-EEECCCCCCCCcceeEEEEE-CCEEEEEcCcCCCCCCcccCCeEEEEECCCCeEEEc
Q 001895 307 LASAYGLAKHRDGRW---E-WAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (999)
Q Consensus 307 ~~d~~~~~~~~~~~W---~-w~~~~g~~P~~R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~~v~vyD~~t~~W~~v 378 (999)
.+.++.|+...++.. . +... . .| ..+++- +++|||.-.. .+.|.+||+. ++...+
T Consensus 188 ~~~I~~~~~~~~g~~~~~~~~~~~--~--~P---~gi~vd~dG~l~va~~~---------~~~V~~~~~~-G~~~~~ 247 (306)
T 2p4o_A 188 KMLLLRIPVDSTDKPGEPEIFVEQ--T--NI---DDFAFDVEGNLYGATHI---------YNSVVRIAPD-RSTTII 247 (306)
T ss_dssp TTEEEEEEBCTTSCBCCCEEEEES--C--CC---SSEEEBTTCCEEEECBT---------TCCEEEECTT-CCEEEE
T ss_pred CCEEEEEEeCCCCCCCccEEEecc--C--CC---CCeEECCCCCEEEEeCC---------CCeEEEECCC-CCEEEE
Confidence 345677765432221 1 1111 0 11 223333 5788887431 3569999986 554443
No 305
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=21.64 E-value=6.5e+02 Score=25.61 Aligned_cols=153 Identities=12% Similarity=0.005 Sum_probs=76.5
Q ss_pred CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCCcccEEEEECCcEEEEEccCCCCCCCCeEEEEECCC
Q 001895 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (999)
Q Consensus 184 g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s 263 (999)
++.+|+..-. ...+++||+.+.. ..... .+ .+ -.+++...++.||+.. -+.+++||+.+
T Consensus 24 ~~~l~~~d~~------~~~i~~~d~~~~~--~~~~~----~~-~~-~~~i~~~~dG~l~v~~-------~~~l~~~d~~~ 82 (297)
T 3g4e_A 24 SNSLLFVDIP------AKKVCRWDSFTKQ--VQRVT----MD-AP-VSSVALRQSGGYVATI-------GTKFCALNWKE 82 (297)
T ss_dssp TTEEEEEETT------TTEEEEEETTTCC--EEEEE----CS-SC-EEEEEEBTTSSEEEEE-------TTEEEEEETTT
T ss_pred CCEEEEEECC------CCEEEEEECCCCc--EEEEe----CC-Cc-eEEEEECCCCCEEEEE-------CCeEEEEECCC
Confidence 3577777643 2579999998753 33332 11 11 2234444444666653 14799999998
Q ss_pred CCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCC-----CCCcccEEEEecCCCCeEEEEECCCCCCCCcceeE
Q 001895 264 KPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDAS-----SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHA 338 (999)
Q Consensus 264 ~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~LyvfGG~~~~-----~~~~~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs 338 (999)
. +++.+.......+..+....++-.++++|+..-.... ......+|.++.. +....... . .....+
T Consensus 83 g--~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~--g~~~~~~~-~----~~~png 153 (297)
T 3g4e_A 83 Q--SAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD--HHVKKYFD-Q----VDISNG 153 (297)
T ss_dssp T--EEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT--SCEEEEEE-E----ESBEEE
T ss_pred C--cEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC--CCEEEEee-c----cccccc
Confidence 8 7776644322111112222333346787774321110 0123457777653 22221111 0 111233
Q ss_pred EEEE--CCEEEEEcCcCCCCCCcccCCeEEEEEC--CCCeE
Q 001895 339 AVFV--NARLHVSGGALGGGRMVEDSSSVAVLDT--AAGVW 375 (999)
Q Consensus 339 av~~--~~~L~V~GG~~~~~~~~~~~~~v~vyD~--~t~~W 375 (999)
.++. +..||+.... .+.|++||. .++..
T Consensus 154 i~~spdg~~lyv~~~~---------~~~i~~~~~d~~~G~~ 185 (297)
T 3g4e_A 154 LDWSLDHKIFYYIDSL---------SYSVDAFDYDLQTGQI 185 (297)
T ss_dssp EEECTTSCEEEEEEGG---------GTEEEEEEECTTTCCE
T ss_pred eEEcCCCCEEEEecCC---------CCcEEEEeccCCCCcc
Confidence 4443 3468887542 355888875 56654
No 306
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=21.24 E-value=6.2e+02 Score=30.13 Aligned_cols=98 Identities=7% Similarity=0.049 Sum_probs=50.9
Q ss_pred CeEEEEECCCCcEEEecCCCCCCCCCcCcEEEEe-CCEEEEEcccCCCCCCcCcEEEEecCCCCCceEEEeecCCCCCCC
Q 001895 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (999)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-g~~iyv~GG~~~~~~~~~dv~vyD~~t~t~kW~~v~~~g~~P~~R 228 (999)
+-+++||+.+++++.+...+ .+....-.+++.. ++.|++.. . +-+++||+.+.. +.... ...+|..
T Consensus 493 ~Gl~~~d~~~~~~~~~~~~~-~~~~~~~~~i~~d~~g~lWigt-~-------~Gl~~~~~~~~~--~~~~~-~~gl~~~- 559 (758)
T 3ott_A 493 KGIDKINPRTREVTKLFADE-LTGEKSPNYLLCDEDGLLWVGF-H-------GGVMRINPKDES--QQSIS-FGSFSNN- 559 (758)
T ss_dssp SSEEEEETTTTEEEEECTTT-SCGGGCEEEEEECTTSCEEEEE-T-------TEEEEECC--CC--CCBCC-CCC---C-
T ss_pred CCcEEEeCCCCceEEecCCC-cCCCcccceEEECCCCCEEEEe-c-------CceEEEecCCCc--eEEec-ccCCCcc-
Confidence 46889999999999874321 1111111222222 34777543 2 248899987753 44332 1234432
Q ss_pred cccEEEEECCcEEEEEccCCCCCCCCeEEEEECCCCCceEEE
Q 001895 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRK 270 (999)
Q Consensus 229 ~~h~~~v~~~~~Lyv~GG~~g~~~~ndv~~yDl~s~~~~W~~ 270 (999)
.-++++.- ++.||+... +-+.+||+.+. +...
T Consensus 560 ~i~~i~~~-~g~lWi~t~-------~Gl~~~~~~~~--~~~~ 591 (758)
T 3ott_A 560 EILSMTCV-KNSIWVSTT-------NGLWIIDRKTM--DARQ 591 (758)
T ss_dssp CEEEEEEE-TTEEEEEES-------SCEEEEETTTC--CEEE
T ss_pred ceEEEEEC-CCCEEEECC-------CCeEEEcCCCc--eeEE
Confidence 22333333 347887542 34899999888 5544
Done!