Query         001898
Match_columns 998
No_of_seqs    466 out of 2781
Neff          4.7 
Searched_HMMs 13730
Date          Mon Mar 25 03:44:16 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001898.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/001898hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1u0ta_ e.52.1.1 (A:) Inorgani 100.0 2.5E-62 1.8E-66  531.5  27.6  291  691-992     1-298 (302)
  2 d1z0sa1 e.52.1.1 (A:1-249) Ino 100.0 2.1E-53 1.5E-57  450.2  23.2  247  692-990     2-248 (249)
  3 d1xria_ c.45.1.1 (A:) Putative  99.9   1E-24 7.6E-29  211.6  12.7  130  245-393     5-138 (151)
  4 d1ywfa1 c.45.1.5 (A:4-275) Pho  99.8 6.3E-22 4.6E-26  209.6  11.1  138  243-393     4-196 (272)
  5 d1ohea2 c.45.1.1 (A:199-380) P  99.4 7.2E-13 5.2E-17  132.5  11.3   99  276-383    47-146 (182)
  6 d1vhra_ c.45.1.1 (A:) VH1-rela  99.3 1.5E-12 1.1E-16  128.8  11.1  131  267-400    28-163 (178)
  7 d1fpza_ c.45.1.1 (A:) Kinase a  99.3   9E-13 6.6E-17  130.6   9.1  107  276-383    36-147 (176)
  8 d1rxda_ c.45.1.1 (A:) Protein   99.3 4.5E-12 3.3E-16  121.5  11.4   96  279-382    25-124 (152)
  9 d1mkpa_ c.45.1.1 (A:) Mapk pho  99.1   5E-11 3.7E-15  113.2  10.1  106  267-382     9-119 (144)
 10 d1m3ga_ c.45.1.1 (A:) Mapk pho  99.1 6.9E-11 5.1E-15  113.0  10.6  103  267-381     9-116 (145)
 11 d1i9sa_ c.45.1.1 (A:) mRNA cap  98.9   2E-09 1.4E-13  108.0  10.7  109  286-400    55-169 (194)
 12 d2pt0a1 c.45.1.4 (A:34-346) My  98.6 6.2E-08 4.5E-12  104.0   9.7   74  308-381   172-248 (313)
 13 d1d5ra2 c.45.1.1 (A:14-187) Ph  98.4 2.1E-07 1.5E-11   90.9   8.2   85  287-381    50-140 (174)
 14 d2qv7a1 e.52.1.2 (A:1-312) Dia  97.6  0.0038 2.8E-07   64.6  22.8  254  690-974     2-296 (312)
 15 d2bona1 e.52.1.2 (A:5-299) Lip  97.2   0.013 9.2E-07   60.1  20.4   59  754-812    52-116 (295)
 16 d1g4us2 c.45.1.2 (S:297-539) S  96.2  0.0052 3.8E-07   62.0   9.0   51  331-381   151-214 (243)
 17 d1lyva_ c.45.1.2 (A:) Protein-  96.0  0.0044 3.2E-07   63.9   7.2   25  346-370   210-234 (283)
 18 d1wcha_ c.45.1.2 (A:) Tyrosine  95.4  0.0057 4.1E-07   64.2   5.4   39  331-369   215-254 (308)
 19 d1jlna_ c.45.1.2 (A:) Tyrosine  95.1   0.012 8.9E-07   61.2   6.6   40  331-370   201-245 (297)
 20 d1rpma_ c.45.1.2 (A:) Tyrosine  94.8   0.017 1.3E-06   59.1   6.9   40  331-370   191-233 (278)
 21 d1lara1 c.45.1.2 (A:1307-1623)  94.8   0.013 9.4E-07   61.4   5.9   38  331-368   190-230 (317)
 22 d2shpa1 c.45.1.2 (A:219-525) T  94.8   0.013 9.5E-07   61.2   5.8   38  331-368   213-255 (307)
 23 d1lara2 c.45.1.2 (A:1628-1876)  94.3   0.032 2.3E-06   56.0   7.2   38  332-369   159-201 (249)
 24 d1yfoa_ c.45.1.2 (A:) Tyrosine  94.3   0.017 1.2E-06   59.5   5.2   40  331-370   200-242 (288)
 25 d1l8ka_ c.45.1.2 (A:) Tyrosine  94.2   0.019 1.4E-06   58.6   5.3   39  332-370   185-228 (273)
 26 d2f71a1 c.45.1.2 (A:2-298) Tyr  94.2   0.017 1.2E-06   59.8   5.1   37  331-367   186-227 (297)
 27 d1fpra_ c.45.1.2 (A:) Tyrosine  94.2   0.019 1.4E-06   58.9   5.4   37  332-368   184-225 (284)
 28 d1p15a_ c.45.1.2 (A:) Protein-  93.9   0.021 1.6E-06   57.3   4.8   38  333-370   158-199 (245)
 29 d1tq1a_ c.46.1.3 (A:) Thiosulf  91.0   0.054 3.9E-06   48.5   3.0   83  276-374    11-97  (119)
 30 d1yt8a4 c.46.1.2 (A:243-372) T  90.8     0.2 1.5E-05   45.4   6.8   79  275-374    25-105 (130)
 31 d1yt8a1 c.46.1.2 (A:107-242) T  90.7    0.24 1.8E-05   45.3   7.4   80  274-374    25-105 (136)
 32 d1gmxa_ c.46.1.3 (A:) Sulfurtr  90.2    0.16 1.1E-05   44.6   5.3   78  275-375     7-84  (108)
 33 d1qxna_ c.46.1.3 (A:) Polysulf  88.7    0.35 2.5E-05   44.3   6.7   81  275-374    25-107 (137)
 34 d1urha2 c.46.1.2 (A:149-268) 3  85.5       1 7.3E-05   39.3   7.7   96  276-375     7-108 (120)
 35 d1rhsa2 c.46.1.2 (A:150-293) R  82.3       2 0.00014   39.5   8.6   93  276-375    14-117 (144)
 36 d1zsqa2 c.45.1.3 (A:199-585) M  75.2     1.4  0.0001   47.4   5.6   27  345-371   210-236 (387)
 37 d1yt8a3 c.46.1.2 (A:373-529) T  74.7     1.5 0.00011   40.5   5.1   75  274-370     6-80  (157)
 38 d1yt8a2 c.46.1.2 (A:6-106) Thi  74.4     3.9 0.00028   34.4   7.4   79  276-375     5-84  (101)
 39 d1vlja_ e.22.1.2 (A:) NADH-dep  74.2     1.5 0.00011   46.4   5.7   96  690-795    34-152 (398)
 40 d1e0ca2 c.46.1.2 (A:136-271) S  74.1       2 0.00015   39.0   5.7   94  275-375    14-114 (136)
 41 d1uara2 c.46.1.2 (A:145-285) S  69.8     1.3 9.6E-05   40.6   3.4   55  320-375    57-116 (141)
 42 d4pfka_ c.89.1.1 (A:) ATP-depe  67.8     1.1 7.7E-05   46.8   2.5   52  754-808    92-153 (319)
 43 d1o2da_ e.22.1.2 (A:) Alcohol   67.3     2.4 0.00018   44.2   5.3   97  690-795    28-146 (359)
 44 d1t3ka_ c.46.1.1 (A:) Dual spe  66.9     1.1 8.3E-05   40.0   2.2   78  275-369    10-87  (132)
 45 d1rrma_ e.22.1.2 (A:) Lactalde  65.5     1.8 0.00013   45.4   3.9   78  690-776    30-107 (385)
 46 d1pfka_ c.89.1.1 (A:) ATP-depe  58.6     2.4 0.00018   44.0   3.2   53  754-809    93-155 (320)
 47 d1i3ca_ c.23.1.1 (A:) Response  56.1      38  0.0028   30.0  10.8  110  688-810     1-131 (144)
 48 d1qo0d_ c.23.1.3 (D:) Positive  55.2      33  0.0024   31.1  10.6   57  754-810    50-123 (189)
 49 d1s1ma1 c.23.16.1 (A:287-544)   55.2     5.4 0.00039   40.5   5.1   37  752-788    54-95  (258)
 50 d2f48a1 c.89.1.1 (A:4-553) Pyr  53.4     2.6 0.00019   47.0   2.5   53  754-808   162-231 (550)
 51 d2a9pa1 c.23.1.1 (A:2-118) DNA  51.8      27   0.002   29.8   8.7   96  691-809     1-115 (117)
 52 d1rrva_ c.87.1.5 (A:) TDP-vanc  48.8      12 0.00087   36.9   6.5   60  748-811   295-370 (401)
 53 d1vcoa1 c.23.16.1 (A:298-547)   47.4     6.8  0.0005   39.5   4.3   38  751-788    54-96  (250)
 54 d1mvoa_ c.23.1.1 (A:) PhoP rec  47.1      38  0.0028   28.9   9.0   99  690-810     2-119 (121)
 55 d1nvma2 c.1.10.5 (A:2-290) 4-h  43.3      37  0.0027   33.0   9.3   97  277-375   122-220 (289)
 56 d1u0sy_ c.23.1.1 (Y:) CheY pro  40.4      30  0.0022   29.7   7.1   95  691-807     2-116 (118)
 57 d1iira_ c.87.1.5 (A:) UDP-gluc  38.9     6.8 0.00049   38.5   2.7   59  749-811   295-369 (401)
 58 d1w25a1 c.23.1.1 (A:2-140) Res  37.4      54  0.0039   28.7   8.5   98  692-810     3-120 (139)
 59 d1pn3a_ c.87.1.5 (A:) TDP-epi-  37.3      44  0.0032   32.4   8.6   60  749-812   280-359 (391)
 60 d1zesa1 c.23.1.1 (A:3-123) Pho  36.5      67  0.0049   27.3   8.8   98  691-809     1-118 (121)
 61 d1kq3a_ e.22.1.2 (A:) Glycerol  36.4     9.7 0.00071   39.0   3.6   42  753-795    81-125 (364)
 62 d2acva1 c.87.1.10 (A:3-463) Tr  35.1      13 0.00092   37.4   4.1   56  752-811   345-423 (461)
 63 d1oj7a_ e.22.1.2 (A:) Hypothet  32.8      21  0.0016   37.1   5.6   76  689-775    31-107 (390)
 64 d1peya_ c.23.1.1 (A:) Sporulat  32.7      50  0.0037   28.1   7.3   97  691-809     2-117 (119)
 65 d1yioa2 c.23.1.1 (A:3-130) Res  32.2 1.1E+02  0.0078   26.1   9.5   97  692-810     4-119 (128)
 66 d1o1ya_ c.23.16.1 (A:) Hypothe  31.8      11 0.00078   36.7   2.8   35  754-788    47-93  (230)
 67 d1zgza1 c.23.1.1 (A:2-121) Tor  30.2 1.1E+02  0.0081   25.6   9.2   97  690-809     1-116 (120)
 68 d1ys7a2 c.23.1.1 (A:7-127) Tra  29.6      91  0.0066   26.5   8.5   97  692-810     3-118 (121)
 69 d1uara1 c.46.1.2 (A:2-144) Sul  29.4      38  0.0027   30.2   6.0   45  329-374    60-104 (143)
 70 d1xhfa1 c.23.1.1 (A:2-122) Aer  29.4      48  0.0035   28.4   6.6   96  692-810     4-118 (121)
 71 d1k68a_ c.23.1.1 (A:) Response  28.1 1.4E+02    0.01   25.9   9.7   56  754-809    54-129 (140)
 72 d1jq5a_ e.22.1.2 (A:) Glycerol  26.1      14   0.001   37.9   2.6   33  754-787    84-117 (366)
 73 d1okga2 c.46.1.2 (A:163-301) 3  25.6      31  0.0023   30.7   4.6   43  331-375    63-110 (139)
 74 d2c1xa1 c.87.1.10 (A:7-456) UD  25.2      29  0.0021   34.7   4.9   56  753-812   335-407 (450)
 75 d1p80a1 c.23.16.3 (A:598-753)   25.2      71  0.0052   28.4   7.2  100  690-795     3-116 (156)
 76 d1mb3a_ c.23.1.1 (A:) Cell div  23.9 1.1E+02  0.0078   25.8   7.8   99  691-810     2-120 (123)
 77 d2fexa1 c.23.16.2 (A:1-188) Hy  22.5      21  0.0015   33.4   2.9   36  754-789    62-104 (188)
 78 d1bf6a_ c.1.9.3 (A:) Phosphotr  22.2 1.1E+02  0.0077   29.5   8.3   21  277-297    36-56  (291)
 79 d2pq6a1 c.87.1.10 (A:8-480) (I  20.8      37  0.0027   33.8   4.5   55  754-812   363-433 (473)
 80 d1dcfa_ c.23.1.2 (A:) Receiver  20.3 2.4E+02   0.018   23.9  12.3  102  689-812     6-130 (134)
 81 d1g2ia_ c.23.16.2 (A:) Intrace  20.2 1.1E+02  0.0077   27.2   7.3   37  754-790    60-104 (166)
 82 d1kgsa2 c.23.1.1 (A:2-123) Pho  20.2 1.8E+02   0.013   24.3   8.6   85  708-810    15-118 (122)

No 1  
>d1u0ta_ e.52.1.1 (A:) Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00  E-value=2.5e-62  Score=531.50  Aligned_cols=291  Identities=26%  Similarity=0.365  Sum_probs=242.9

Q ss_pred             CEEEEEecCCh-hHHHHHHHHHHHHhcCCCeEEEEcCChhhHhhcCCCCc-cc-----eeeeccCcccccCCccEEEEEc
Q 001898          691 RTVLVLKKPGP-ALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFG-FV-----QTFYLQDTSDLHERVDFVACLG  763 (998)
Q Consensus       691 k~VlIv~K~~~-~~~~~a~~l~~~L~~~~gi~V~ve~~~~~~~~~~~~~~-~~-----~~~~~~~~~dl~~~~DlVIvLG  763 (998)
                      |+|+|+.+++. ++.+.++++++||.+ .|++|.++...+.......... ..     .........+..+++|+||+||
T Consensus         1 r~v~lv~~~~k~~a~~~a~~i~~~L~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dlvi~lG   79 (302)
T d1u0ta_           1 RSVLLVVHTGRDEATETARRVEKVLGD-NKIALRVLSAEAVDRGSLHLAPDDMRAMGVEIEVVDADQHAADGCELVLVLG   79 (302)
T ss_dssp             CEEEEEESSSGGGGSHHHHHHHHHHHT-TTCEEEEEC-----------------------------------CCCEEEEE
T ss_pred             CEEEEEEeCCCHHHHHHHHHHHHHHHH-CCCEEEEEecchhcccccccCchhhhhcCcccccccccccccccccEEEEEc
Confidence            68999999986 567889999999975 6899998766442211100000 00     0000011224456789999999


Q ss_pred             CCchHHHHHHhccCCCCcEEEEeCCCCcccCCCCcccHHHHHHHHHccCCCCCceeeeeeeEEEEEEEeCCeecCCcccc
Q 001898          764 GDGVILHASNLFRGAVPPVISFNLGSLGFLTSHPFEDYRQDLRQVIYGNNTLDGVYITLRMRLCCEIFRNGKAMPGKVFD  843 (998)
Q Consensus       764 GDGTlL~Aar~~~~~~~PVLGINlG~LGFLt~~~~eel~~~L~~il~G~~~i~~~~i~~R~rL~~~V~r~G~~v~~~~~~  843 (998)
                      ||||||+|+|.+...++||||||+|+||||++++++++++.++++++|+     +.++.|++|++.+.++++..  ..++
T Consensus        80 GDGT~L~a~~~~~~~~~PilGin~G~lGFL~~~~~~~~~~~l~~~~~g~-----~~~~~r~~l~~~~~~~~~~~--~~~~  152 (302)
T d1u0ta_          80 GDGTFLRAAELARNASIPVLGVNLGRIGFLAEAEAEAIDAVLEHVVAQD-----YRVEDRLTLDVVVRQGGRIV--NRGW  152 (302)
T ss_dssp             CHHHHHHHHHHHHHHTCCEEEEECSSCCSSCSEEGGGHHHHHHHHHHTC-----CEEEEECCEEEEEEETTEEE--EEEE
T ss_pred             CChHHHHHHHHhhccCCeEEEeCCCccceecccchhHHHHHHHHHHhcC-----cceeeeeeeeeEeccCCcee--eehh
Confidence            9999999999998888999999999999999999999999999999998     45789999999998887654  3478


Q ss_pred             eeeeEEEecCCCCeeEEEEEEECCEEeeeEeecEeEEcCCCChhHHhhhcCCCCcCCCCCceeeEEeCCCCCCCCCeEeC
Q 001898          844 VLNEVVVDRGSNPYLSKIECYEHDRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILP  923 (998)
Q Consensus       844 ALNDVvI~Rg~~~~~~~i~V~IDge~v~~~rgDGLIVSTPTGSTAYsLSAGGPIV~P~v~aillTPIcPHsLs~RPIVlp  923 (998)
                      ||||++|.++..++++.+++++||+++++|+|||||||||||||||||||||||+||++++|++||||||+++.||+|+|
T Consensus       153 alNdvvi~~~~~~~~~~~~v~i~~~~~~~~~~DGlivSTPtGSTAYslSaGGPIv~p~~~~i~vtpi~p~sl~~rplVl~  232 (302)
T d1u0ta_         153 ALNEVSLEKGPRLGVLGVVVEIDGRPVSAFGCDGVLVSTPTGSTAYAFSAGGPVLWPDLEAILVVPNNAHALFGRPMVTS  232 (302)
T ss_dssp             ESSEEEEECSSSSSCEEEEEESSSSEEEEEEESEEEEECTGGGGTHHHHTTCCEECTTCCCEEEEEESCSSSCCCCEEEC
T ss_pred             hhhhhhcccCcccceeeEEEEecceeEEEeecceEEEehhhccCcchhhccCcccccccccccccccccccccCceEEec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCEEEEEEcCCCCccEEEEEcCccccccCCCCEEEEEeeCceeeEEecCCCCCchHHHHhhhcCCCCc
Q 001898          924 DSARLELKIPDDARSNAWVSFDGKRRQQLSRGDSVRIFMSEHPIPTVNKSDQTGDWFHSLVRCLNWNER  992 (998)
Q Consensus       924 ~~s~I~I~v~~~~r~~~~vsiDG~~~~~L~~Gd~V~I~~S~~~l~lV~~~~~~~d~f~~Lr~KL~Wg~R  992 (998)
                      ++++|+|++.... ..+.+++||+....+++||+|.|++|++++++++..+  .+||++|++||+|+.+
T Consensus       233 ~~~~i~i~~~~~~-~~~~v~~DG~~~~~l~~~d~I~I~~s~~~~~lv~~~~--~~f~~~l~~Kl~w~~~  298 (302)
T d1u0ta_         233 PEATIAIEIEADG-HDALVFCDGRREMLIPAGSRLEVTRCVTSVKWARLDS--APFTDRLVRKFRLPVT  298 (302)
T ss_dssp             TTCCEEEEECTTS-CCEEEEETTTEEEEECTTCEEEEEECSSCEEEEECSC--CCHHHHHHHHHTCCCT
T ss_pred             CCcEEEEEEecCC-CCEEEEEECCccEEeCCCCEEEEEECCCEEEEEEeCC--CCHHHHHHHHcCCCCC
Confidence            9999999987544 3689999999999999999999999999999998654  5899999999998865


No 2  
>d1z0sa1 e.52.1.1 (A:1-249) Inorganic polyphosphate/ATP-NAD kinase PpnK {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=100.00  E-value=2.1e-53  Score=450.18  Aligned_cols=247  Identities=24%  Similarity=0.418  Sum_probs=209.7

Q ss_pred             EEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhHhhcCCCCccceeeeccCcccccCCccEEEEEcCCchHHHH
Q 001898          692 TVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACLGGDGVILHA  771 (998)
Q Consensus       692 ~VlIv~K~~~~~~~~a~~l~~~L~~~~gi~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~DlVIvLGGDGTlL~A  771 (998)
                      ++.|+.|....+    +++.++|.+ .++++-+...                     ..+-.+++|+||++|||||||+|
T Consensus         2 r~~iv~k~d~~~----k~i~e~l~~-~~~~~~~~~~---------------------~~~~~~~~D~vi~iGGDGT~L~a   55 (249)
T d1z0sa1           2 RAAVVYKTDGHV----KRIEEALKR-LEVEVELFNQ---------------------PSEELENFDFIVSVGGDGTILRI   55 (249)
T ss_dssp             EEEEEESSSTTH----HHHHHHHHH-TTCEEEEESS---------------------CCGGGGGSSEEEEEECHHHHHHH
T ss_pred             eEEEEECCchhH----HHHHHHHHh-cCCeEEEecC---------------------ccccccCCCEEEEECCcHHHHHH
Confidence            678999888654    555666643 3555443211                     01123578999999999999999


Q ss_pred             HHhccCCCCcEEEEeCCCCcccCCCCcccHHHHHHHHHccCCCCCceeeeeeeEEEEEEEeCCeecCCcccceeeeEEEe
Q 001898          772 SNLFRGAVPPVISFNLGSLGFLTSHPFEDYRQDLRQVIYGNNTLDGVYITLRMRLCCEIFRNGKAMPGKVFDVLNEVVVD  851 (998)
Q Consensus       772 ar~~~~~~~PVLGINlG~LGFLt~~~~eel~~~L~~il~G~~~i~~~~i~~R~rL~~~V~r~G~~v~~~~~~ALNDVvI~  851 (998)
                      +|.+.. .+||+|||+|+||||+++++++++..|+++++.      +.++.|+++.+.    +.    ..++||||++|.
T Consensus        56 ~~~~~~-~~PilGIn~G~lGFL~~~~~~~~~~~l~~~~~~------~~~~~~~~~~~~----~~----~~~~AlNev~i~  120 (249)
T d1z0sa1          56 LQKLKR-CPPIFGINTGRVGLLTHASPENFEVELKKAVEK------FEVERFPRVSCS----AM----PDVLALNEIAVL  120 (249)
T ss_dssp             HTTCSS-CCCEEEEECSSSCTTCCBBTTBCHHHHHHHHHH------CCEEEECCEEET----TE----EEEEESSEEEEE
T ss_pred             HHHhcC-CCcEEEECccccCCccccCHHHHHHHHHHhhhh------hhhhheehhhee----ee----ecccccccceee
Confidence            998864 689999999999999999999999999998863      346788888763    22    236799999999


Q ss_pred             cCCCCeeEEEEEEECCEEeeeEeecEeEEcCCCChhHHhhhcCCCCcCCCCCceeeEEeCCCCCCCCCeEeCCCCEEEEE
Q 001898          852 RGSNPYLSKIECYEHDRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSARLELK  931 (998)
Q Consensus       852 Rg~~~~~~~i~V~IDge~v~~~rgDGLIVSTPTGSTAYsLSAGGPIV~P~v~aillTPIcPHsLs~RPIVlp~~s~I~I~  931 (998)
                      ++...+++.+++++||+++++++||||||||||||||||+|||||||||++++|++||||||+++.||+|+|++++|+|+
T Consensus       121 ~~~~~~~~~~~i~i~~~~~~~~~gDGliisTptGSTAY~lSaGGpIv~p~~~~~~ltpI~p~~l~~rplVl~~~~~I~i~  200 (249)
T d1z0sa1         121 SRKPAKMIDVALRVDGVEVDRIRCDGFIVATQIGSTGYAFSAGGPVVEPYLECFILIPIAPFRFGWKPYVVSMERKIEVI  200 (249)
T ss_dssp             ESSTTCCEEEEEEETTEEEEEEEESEEEEEESGGGGTHHHHTTCCEECTTSCCEEEEEESCCSSBCCCEEECTTSCEEEE
T ss_pred             ecCcchhhhhhhhcccccceEEeeceEEEeccccCHHHHHhcCCceeecCCCceEEeeecccccCCCCEEECCCCEEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             EcCCCCccEEEEEcCccccccCCCCEEEEEeeCceeeEEecCCCCCchHHHHhhhcCCC
Q 001898          932 IPDDARSNAWVSFDGKRRQQLSRGDSVRIFMSEHPIPTVNKSDQTGDWFHSLVRCLNWN  990 (998)
Q Consensus       932 v~~~~r~~~~vsiDG~~~~~L~~Gd~V~I~~S~~~l~lV~~~~~~~d~f~~Lr~KL~Wg  990 (998)
                      ..     ++.+++||+....+  ++.|.|++++.++.++..    .+||+.|++||+|.
T Consensus       201 ~~-----~~~v~~DG~~~~~~--~~~i~i~~s~~~~~~~~~----~~~~~~l~~KL~~~  248 (249)
T d1z0sa1         201 AE-----KAIVVADGQKSVDF--DGEITIEKSEFPAVFFKN----EKRFRNLFGKVRSI  248 (249)
T ss_dssp             EE-----EEEEEETTTEEEEE--EEEEEEEECSCCEEEECC----TTHHHHHHHHHHTC
T ss_pred             ec-----ceEEEECCceeecC--CCEEEEEECCCceEEecc----chHHHHHHHHhccC
Confidence            74     47899999986554  789999999999988853    48999999999996


No 3  
>d1xria_ c.45.1.1 (A:) Putative phosphatase At1g05000 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.91  E-value=1e-24  Score=211.55  Aligned_cols=130  Identities=18%  Similarity=0.234  Sum_probs=109.8

Q ss_pred             CCCceeeeccCCcccccCCCCcceEEEcCCCCHhhHHHHHhcCCcEEEEcCCCCcCCCchhHhhHHhhhcCCcEEEEEec
Q 001898          245 FANWSPVYLSNSKDDIASKDSEVTFCRGGQVTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPV  324 (998)
Q Consensus       245 i~Nfr~V~~~~s~d~~~~~~~~~~LYRSgqpT~eDl~~L~elGIKTVIDLRsee~ee~~~~a~e~~~~e~~GI~yIhIPV  324 (998)
                      ..||+.|.              ..|||||+|+++++++|+++|||||||||++. +..    .....+...||+++|+|+
T Consensus         5 p~nF~~V~--------------~~lyRs~~~t~~~~~~L~~lgIktIidLr~~~-e~~----~~~~~~~~~gi~~~~ip~   65 (151)
T d1xria_           5 PLNFSMVD--------------NGIFRSGFPDSANFSFLQTLGLRSIIYLCPEP-YPE----SNLQFLKSNGIRLFQFGI   65 (151)
T ss_dssp             CTTCEEEE--------------TTEEEESCCCHHHHHHHHHHTCSEEEECCSSC-CCH----HHHHHHHHHTCEEEECCC
T ss_pred             Ccccceec--------------CCceecCCCCHHHHHHHHHCCCCEEEECCCcc-hhh----cccchhhhcCceEeecCc
Confidence            47888886              25999999999999999999999999999875 222    234567778999999999


Q ss_pred             CCCCCC----CHHHHHHHHHHHhcCCCCcEEEeCcCCCChHHHHHHHHHHHcCCCHHHHHHhhccccccccch
Q 001898          325 EVRTAP----TMEQVEKFASLVSNSSKKPLYLHSKEGVWRTYAMVSRWRQYMARCASQISGQTITSNDVLLKD  393 (998)
Q Consensus       325 ~d~~~p----s~e~v~~flelL~d~~~~PVLVHCtAGKDRTG~vvaLll~llGVs~ddIlaDYL~SN~~~~~~  393 (998)
                      .+...+    ..+.+..+++.+.+..++|+||||++||||||+++|+++.++||+.++|++||++++....+.
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvlvHC~~GkdRTG~v~a~~l~~~g~~~~~i~~dy~~~~~~~~~~  138 (151)
T d1xria_          66 EGNKEPFVNIPDHKIRMALKVLLDEKNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLTSIFDEYQRFAAAKARV  138 (151)
T ss_dssp             CCCCGGGCCCCHHHHHHHHHHHHCGGGCSEEEECSSSSSHHHHHHHHHHHHTTBCHHHHHHHHHHHHGGGCCH
T ss_pred             cccccccccccHHHHHHHHHHHhcCCCCCEEEEcCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHhccCcccH
Confidence            865533    467888888888777889999999999999999999999999999999999999987665444


No 4  
>d1ywfa1 c.45.1.5 (A:4-275) Phosphotyrosine protein phosphatase PtpB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.85  E-value=6.3e-22  Score=209.60  Aligned_cols=138  Identities=15%  Similarity=0.144  Sum_probs=102.0

Q ss_pred             cCCCCceeeeccCCcccccCCCCcceEEEcCCC---CHhhHHHHHhcCCcEEEEcCCCCcCCCchhHhhHHhhhcCCcEE
Q 001898          243 TLFANWSPVYLSNSKDDIASKDSEVTFCRGGQV---TEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVEL  319 (998)
Q Consensus       243 t~i~Nfr~V~~~~s~d~~~~~~~~~~LYRSgqp---T~eDl~~L~elGIKTVIDLRsee~ee~~~~a~e~~~~e~~GI~y  319 (998)
                      .++.|||++++.++      ..+.+.||||+++   |++|++.|.++||+||||||+..+.. .    ........|+++
T Consensus         4 ~G~~NfRDlGG~~t------~vr~g~l~RS~~l~~lt~~d~~~L~~lgI~tViDLRs~~E~~-~----~~~~~~~~~~~~   72 (272)
T d1ywfa1           4 PGAWNFRDVADTAT------ALRPGRLFRSSELSRLDDAGRATLRRLGITDVADLRSSREVA-R----RGPGRVPDGIDV   72 (272)
T ss_dssp             TTCCSCEEGGGTCT------TSCTTSEEEESCCTTCCHHHHHHHHHHTCCEEEECCCHHHHH-H----HCSCCCCTTCEE
T ss_pred             CCCCCcccCCCCcc------cccCCceEecCCcCcCCHHHHHHHHHCCCcEEEECCCHHHHh-h----cCCCCCCCCceE
Confidence            46788999876543      3567899999964   79999999999999999999985100 0    001123468999


Q ss_pred             EEEecCCCCCCC--------------------------------H-------H-------------HHHHHHHHHhcCCC
Q 001898          320 IKIPVEVRTAPT--------------------------------M-------E-------------QVEKFASLVSNSSK  347 (998)
Q Consensus       320 IhIPV~d~~~ps--------------------------------~-------e-------------~v~~flelL~d~~~  347 (998)
                      +++|+.......                                .       +             .+..++.++  ..+
T Consensus        73 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~Y~~~~~~~~~~~~~~~~~~~~--~~~  150 (272)
T d1ywfa1          73 HLLPFPDLADDDADDSAPHETAFKRLLTNDGSNGESGESSQSINDAATRYMTDEYRQFPTRNGAQRALHRVVTLL--AAG  150 (272)
T ss_dssp             EECCCCCSCC-------------------------------CCCHHHHHHHHHHHHHGGGSTTHHHHHHHHHHHH--HTT
T ss_pred             EEecCcccccccccccchhhHHHHHHhhhccccchhhhhhhhhhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHh--ccC
Confidence            999985321100                                0       0             011122232  357


Q ss_pred             CcEEEeCcCCCChHHHHHHHHHHHcCCCHHHHHHhhccccccccch
Q 001898          348 KPLYLHSKEGVWRTYAMVSRWRQYMARCASQISGQTITSNDVLLKD  393 (998)
Q Consensus       348 ~PVLVHCtAGKDRTG~vvaLll~llGVs~ddIlaDYL~SN~~~~~~  393 (998)
                      +|+||||++||||||+++|+++.++||+.++|++||++||.++...
T Consensus       151 ~pvL~HCtaGKDRTG~~aallL~llGV~~e~I~~DYllSn~~~~~~  196 (272)
T d1ywfa1         151 RPVLTHCFAGKDRTGFVVALVLEAVGLDRDVIVADYLRSNDSVPQL  196 (272)
T ss_dssp             CCEEEECSSSSSHHHHHHHHHHHHTTCCHHHHHHHHHGGGGGHHHH
T ss_pred             CCEEEecCCCCcchHHHHHHHHHHcCCCHHHHHHHHHhhhhhhHHH
Confidence            8999999999999999999999999999999999999999998664


No 5  
>d1ohea2 c.45.1.1 (A:199-380) Proline directed phosphatase CDC14b2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.37  E-value=7.2e-13  Score=132.45  Aligned_cols=99  Identities=15%  Similarity=0.222  Sum_probs=83.2

Q ss_pred             CHhhHHHHHhcCCcEEEEcCCCCcCCCchhHhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhcCCCCcEEEeCc
Q 001898          276 TEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSNSSKKPLYLHSK  355 (998)
Q Consensus       276 T~eDl~~L~elGIKTVIDLRsee~ee~~~~a~e~~~~e~~GI~yIhIPV~d~~~ps~e~v~~flelL~d~~~~PVLVHCt  355 (998)
                      .++.++.|+++||++||||+.+.     +   +.+.+...|++|+++|+.|...|+.+++.+|++.+. ..++||+|||.
T Consensus        47 ~~~~l~~l~~~gi~~Ii~l~~~~-----~---~~~~~~~~gi~~~~~p~~D~~~P~~~~i~~~i~~~~-~~~~~V~VHC~  117 (182)
T d1ohea2          47 PETYIQYFKNHNVTTIIRLNKRM-----Y---DAKRFTDAGFDHHDLFFADGSTPTDAIVKEFLDICE-NAEGAIAVHSK  117 (182)
T ss_dssp             THHHHHHHHHTTEEEEEECSCCS-----S---CTHHHHTTTCEEEECCCCTTCCCCHHHHHHHHHHHH-SCSSEEEEECS
T ss_pred             HHHHHHHHHhcCCCEEEEecCCC-----c---CccccccCCcEEEecCCCCCCCcCHHHHHHHHHHHH-cCCCcEEEEeC
Confidence            35668999999999999998653     1   114457789999999999999999999999999885 56789999999


Q ss_pred             CCCChHHHHHHHHHH-HcCCCHHHHHHhh
Q 001898          356 EGVWRTYAMVSRWRQ-YMARCASQISGQT  383 (998)
Q Consensus       356 AGKDRTG~vvaLll~-llGVs~ddIlaDY  383 (998)
                      +|++|||+++++|+. ..|++.++|++..
T Consensus       118 ~G~gRsgt~~a~yL~~~~~~~~~~Al~~v  146 (182)
T d1ohea2         118 AGLGRTGTLIACYIMKHYRMTAAETIAWV  146 (182)
T ss_dssp             SSSHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_pred             CCCcchHHHHHHHHHHHcCCCHHHHHHHH
Confidence            999999999877765 4699999998855


No 6  
>d1vhra_ c.45.1.1 (A:) VH1-related dual-specificity phosphatase, VHR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.34  E-value=1.5e-12  Score=128.83  Aligned_cols=131  Identities=11%  Similarity=0.101  Sum_probs=92.6

Q ss_pred             ceEEEcCCCCHhhHHHHHhcCCcEEEEcCCCCcCCCchhHhhHHhhhcCCcEEEEEecCCCCCCCH----HHHHHHHHHH
Q 001898          267 VTFCRGGQVTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTM----EQVEKFASLV  342 (998)
Q Consensus       267 ~~LYRSgqpT~eDl~~L~elGIKTVIDLRsee~ee~~~~a~e~~~~e~~GI~yIhIPV~d~~~ps~----e~v~~flelL  342 (998)
                      +.||.|+.+...+.++|++.||++|||++.+.. ...+ ..........|++|+++|+.|....+.    +.+.+|++..
T Consensus        28 ~~LylG~~~~a~d~~~L~~~gI~~Iin~~~~~~-~~~~-~~~~~~~~~~~i~y~~ipi~D~~~~~i~~~~~~~~~fi~~~  105 (178)
T d1vhra_          28 PRIYVGNASVAQDIPKLQKLGITHVLNAAEGRS-FMHV-NTNANFYKDSGITYLGIKANDTQEFNLSAYFERAADFIDQA  105 (178)
T ss_dssp             TTEEEECHHHHTCHHHHHHHTCCEEEETTBSSS-TTSB-CCCHHHHTTTTCEEEECCCCCSTTCCGGGGHHHHHHHHHHH
T ss_pred             CCEEECChhHhcCHHHHHHcCCEEEEEcCcccc-cccc-cccccccccCCcEEEEEecCCCcchhHHHHHHHHHHHhhhh
Confidence            369999999999999999999999999987641 1111 122345677899999999987654432    3344454332


Q ss_pred             hcCCCCcEEEeCcCCCChHHHHHHHHHH-HcCCCHHHHHHhhccccccccchhhhhhhh
Q 001898          343 SNSSKKPLYLHSKEGVWRTYAMVSRWRQ-YMARCASQISGQTITSNDVLLKDSTRTRKL  400 (998)
Q Consensus       343 ~d~~~~PVLVHCtAGKDRTG~vvaLll~-llGVs~ddIlaDYL~SN~~~~~~~~~~~~~  400 (998)
                      ....+++|||||.+|.+|||++++.|++ ..|++.++|++ |+++.-......+-..+|
T Consensus       106 ~~~~~~~VLVHC~~G~sRS~~vv~aYLm~~~~~s~~~A~~-~vr~~R~i~pn~~f~~qL  163 (178)
T d1vhra_         106 LAQKNGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKSALS-IVRQNREIGPNDGFLAQL  163 (178)
T ss_dssp             HTSTTCCEEEECSSSSSHHHHHHHHHHHHHSCCCHHHHHH-HHHHHSCCCCCHHHHHHH
T ss_pred             hhcCCceEEEEcCCCCccHHHHHHHHHHHhcCCCHHHHHH-HHHhCCCCCCCHHHHHHH
Confidence            2345679999999999999998766654 57999999985 777644433333334555


No 7  
>d1fpza_ c.45.1.1 (A:) Kinase associated phosphatase (kap) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.33  E-value=9e-13  Score=130.64  Aligned_cols=107  Identities=12%  Similarity=0.089  Sum_probs=83.9

Q ss_pred             CHhhHHHHHhcCCcEEEEcCCCCcCCCch-hHhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhc--CCCCcEEE
Q 001898          276 TEEGLKWLMEKGYKTIVDIRAERVKDNFY-EAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSN--SSKKPLYL  352 (998)
Q Consensus       276 T~eDl~~L~elGIKTVIDLRsee~ee~~~-~a~e~~~~e~~GI~yIhIPV~d~~~ps~e~v~~flelL~d--~~~~PVLV  352 (998)
                      ..+|++.|++.|+++|++|.+..+ ...+ .....+.+...|++|+|+|+.|...|+.+.+.++++.+.+  ..+++|+|
T Consensus        36 ~~~dl~~L~~~gi~~Vv~L~~~~E-~~~~~~~~~~~~~~~~gi~~~~~p~~D~~~p~~~~~~~~~~~i~~~l~~~~~V~V  114 (176)
T d1fpza_          36 VQKDTEELKSCGIQDIFVFCTRGE-LSKYRVPNLLDLYQQCGIITHHHPIADGGTPDIASCCEIMEELTTCLKNYRKTLI  114 (176)
T ss_dssp             HHHHHHHHHHHTCCEEEECCCHHH-HHHTTCTTHHHHHHHTTCEEEECCCCTTCCCCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             HHHHHHHHHhCCCCEEEEeCChhh-hhhcCCCcHHHHHHHcCCEEEeCCccCCCchhhHHHHHHHHHHHHHHHcCCeEEE
Confidence            368899999999999999987641 0000 0112355778999999999999999998888887776643  35679999


Q ss_pred             eCcCCCChHHHHHHHHHHH--cCCCHHHHHHhh
Q 001898          353 HSKEGVWRTYAMVSRWRQY--MARCASQISGQT  383 (998)
Q Consensus       353 HCtAGKDRTG~vvaLll~l--lGVs~ddIlaDY  383 (998)
                      ||++|++|||+++++|+..  .|++.++|++..
T Consensus       115 HC~~G~gRtg~v~~~~Li~~~~~~~~~~Ai~~v  147 (176)
T d1fpza_         115 HSYGGLGRSCLVAACLLLYLSDTISPEQAIDSL  147 (176)
T ss_dssp             ECSSSSSHHHHHHHHHHHHHCSSCCHHHHHHHH
T ss_pred             EecCCCCchHHHHHHHHHHHhcCCCHHHHHHHH
Confidence            9999999999999888775  489999998744


No 8  
>d1rxda_ c.45.1.1 (A:) Protein tyrosine phosphatase type IVa {Human (Homo sapiens), pr-1 [TaxId: 9606]}
Probab=99.29  E-value=4.5e-12  Score=121.45  Aligned_cols=96  Identities=16%  Similarity=0.131  Sum_probs=77.0

Q ss_pred             hHHHHHhcCCcEEEEcCCCCcCCCchhHhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHh----cCCCCcEEEeC
Q 001898          279 GLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVS----NSSKKPLYLHS  354 (998)
Q Consensus       279 Dl~~L~elGIKTVIDLRsee~ee~~~~a~e~~~~e~~GI~yIhIPV~d~~~ps~e~v~~flelL~----d~~~~PVLVHC  354 (998)
                      -++.|.+.||++||+|..+.  ..      ...++..|++++++|+.|...|+.+.+..+...+.    ...++||+|||
T Consensus        25 f~~~l~~~~i~~Iv~l~e~~--y~------~~~~~~~~i~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~v~VHC   96 (152)
T d1rxda_          25 FIEELKKYGVTTIVRVCEAT--YD------TTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHC   96 (152)
T ss_dssp             HHHHHHHTTEEEEEECSCCC--SC------CHHHHHTTCEEEECCC--CCCCCHHHHHHHHHHHHHHHHHSTTCEEEEEC
T ss_pred             HHHHHHHhCCeEEeeccccc--CC------chheeecceEEEEeeCCCCCCCCHHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence            36678889999999997654  11      13456789999999999999999888777765443    34578999999


Q ss_pred             cCCCChHHHHHHHHHHHcCCCHHHHHHh
Q 001898          355 KEGVWRTYAMVSRWRQYMARCASQISGQ  382 (998)
Q Consensus       355 tAGKDRTG~vvaLll~llGVs~ddIlaD  382 (998)
                      ++|.+|||+++++++...|++.++|++.
T Consensus        97 ~~G~gRsg~~~a~~l~~~~~~~~~av~~  124 (152)
T d1rxda_          97 VAGLGRAPVLVALALIEGGMKYEDAVQF  124 (152)
T ss_dssp             SSSSTTHHHHHHHHHHHTTCCHHHHHHH
T ss_pred             cCCcccHHHHHHHHHHHhCcCHHHHHHH
Confidence            9999999999999998899999999874


No 9  
>d1mkpa_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pyst1 (mkp3) [TaxId: 9606]}
Probab=99.14  E-value=5e-11  Score=113.23  Aligned_cols=106  Identities=14%  Similarity=0.148  Sum_probs=80.3

Q ss_pred             ceEEEcCCCCHhhHHHHHhcCCcEEEEcCCCCcCCCchhHhhHHhhhcCCcEEEEEecCCCCCCC----HHHHHHHHHHH
Q 001898          267 VTFCRGGQVTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPT----MEQVEKFASLV  342 (998)
Q Consensus       267 ~~LYRSgqpT~eDl~~L~elGIKTVIDLRsee~ee~~~~a~e~~~~e~~GI~yIhIPV~d~~~ps----~e~v~~flelL  342 (998)
                      +.||.|+..+..+.+.|++.||++|||+..+.   +..      .....+++|.++|+.|....+    .+.+.+|++-.
T Consensus         9 p~lylG~~~~a~~~~~l~~~gI~~Iin~~~~~---~~~------~~~~~~~~y~~~~~~D~~~~~i~~~~~~~~~~i~~~   79 (144)
T d1mkpa_           9 PFLYLGCAKDSTNLDVLEEFGIKYILNVTPNL---PNL------FENAGEFKYKQIPISDHWSQNLSQFFPEAISFIDEA   79 (144)
T ss_dssp             TTEEEECTTSCCCHHHHHHTTEEEEEECCSSC---CCE------EEEETTEEEEECCCCCSTTCCSGGGHHHHHHHHHHH
T ss_pred             CCEEECChhHhcCHHHHHhCCCcEEEEccccC---Ccc------ccCCCceEEEEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence            36999999999999999999999999997653   111      124568999999998765443    23444444433


Q ss_pred             hcCCCCcEEEeCcCCCChHHHHHHHHHH-HcCCCHHHHHHh
Q 001898          343 SNSSKKPLYLHSKEGVWRTYAMVSRWRQ-YMARCASQISGQ  382 (998)
Q Consensus       343 ~d~~~~PVLVHCtAGKDRTG~vvaLll~-llGVs~ddIlaD  382 (998)
                      . ..+++|||||.+|++|+|++++.|++ ..|++.++|++-
T Consensus        80 ~-~~~~~VlVHC~~G~~RS~~vv~aYLm~~~~~~~~~A~~~  119 (144)
T d1mkpa_          80 R-GKNCGVLVHSLAGISRSVTVTVAYLMQKLNLSMNDAYDI  119 (144)
T ss_dssp             H-HTTCEEEEECSSCSHHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred             h-hccceEEEEecccccchHHHHHHHHHHHhCCCHHHHHHH
Confidence            2 35789999999999999999766554 479999999874


No 10 
>d1m3ga_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pac-1 [TaxId: 9606]}
Probab=99.13  E-value=6.9e-11  Score=112.95  Aligned_cols=103  Identities=17%  Similarity=0.180  Sum_probs=79.5

Q ss_pred             ceEEEcCCCCHhhHHHHHhcCCcEEEEcCCCCcCCCchhHhhHHhhhcCCcEEEEEecCCCCCCC----HHHHHHHHHHH
Q 001898          267 VTFCRGGQVTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPT----MEQVEKFASLV  342 (998)
Q Consensus       267 ~~LYRSgqpT~eDl~~L~elGIKTVIDLRsee~ee~~~~a~e~~~~e~~GI~yIhIPV~d~~~ps----~e~v~~flelL  342 (998)
                      +.||.|+.....+.++|+++||++|||+..+.   +.+        ...+++|.++|+.|....+    .+....|++..
T Consensus         9 p~LylG~~~~a~~~~~L~~~gI~~Iin~~~~~---~~~--------~~~~~~y~~i~i~D~~~~~i~~~~~~~~~~i~~~   77 (145)
T d1m3ga_           9 PYLFLGSCSHSSDLQGLQACGITAVLNVSASC---PNH--------FEGLFRYKSIPVEDNQMVEISAWFQEAIGFIDWV   77 (145)
T ss_dssp             TTEEECCSTHHHHHHHHHHHTCSEEEECSSSS---SEE--------ECSSSEEEECCCCCSTTCCCTTSHHHHHHHHHHH
T ss_pred             CCEEEcChhhhcCHHHHHHcCCcEEEEecCCC---CcC--------CCCceEEEEEeccCCchhhHHHHHHHHHHHHHHh
Confidence            36999999999999999999999999996643   111        2357999999998755433    34555555433


Q ss_pred             hcCCCCcEEEeCcCCCChHHHHHHHHHH-HcCCCHHHHHH
Q 001898          343 SNSSKKPLYLHSKEGVWRTYAMVSRWRQ-YMARCASQISG  381 (998)
Q Consensus       343 ~d~~~~PVLVHCtAGKDRTG~vvaLll~-llGVs~ddIla  381 (998)
                      . ..+++|||||.+|.+|++++++.|++ ..|++.++|++
T Consensus        78 ~-~~~~~VlVHC~~G~sRS~~v~~aYLm~~~~~~~~~A~~  116 (145)
T d1m3ga_          78 K-NSGGRVLVHSQAGISRSATICLAYLMQSRRVRLDEAFD  116 (145)
T ss_dssp             H-HTTCCEEECCSSSSSHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred             h-ccCceEEEEcccccccHHHHHHHHHHHHhCCCHHHHHH
Confidence            2 35679999999999999999776655 47999999987


No 11 
>d1i9sa_ c.45.1.1 (A:) mRNA capping enzyme, triphosphatase domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.90  E-value=2e-09  Score=108.02  Aligned_cols=109  Identities=18%  Similarity=0.251  Sum_probs=80.6

Q ss_pred             cCCcEEEEcCCCCcCCCchhHhhHHhhhcCCcEEEEEecCCC-CCCCHHHHHHHHHHHhc----CCCCcEEEeCcCCCCh
Q 001898          286 KGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVR-TAPTMEQVEKFASLVSN----SSKKPLYLHSKEGVWR  360 (998)
Q Consensus       286 lGIKTVIDLRsee~ee~~~~a~e~~~~e~~GI~yIhIPV~d~-~~ps~e~v~~flelL~d----~~~~PVLVHCtAGKDR  360 (998)
                      .++..||||..+.   ..|.   ...++..||+|+++|+.+. ..|+.+.+..|.+++..    ..+++|+|||++|++|
T Consensus        55 ~~~~~vinlt~~~---~~Y~---~~~~~~~gi~~~~~~~~~~~~~P~~~~~~~f~~~v~~~~~~~~~~~V~VHC~~G~~R  128 (194)
T d1i9sa_          55 VKMSLLVDLTNTS---RFYD---RNDIEKEGIKYIKLQCKGHGECPTTENTETFIRLCERFNERSPPELIGVHCTHGFNR  128 (194)
T ss_dssp             CCEEEEEECSSCS---SSSC---THHHHTTTCEEEECCCCCTTCCCCHHHHHHHHHHHTTC-----CCEEEEECSSSSHH
T ss_pred             CCceEEEEccCCC---CCcC---HHHHHhcCceEEEecCCCCCCCCChHHHHHHHHHHHHHHHhCCCCeEEEECCCCCCc
Confidence            4788999998754   2332   2456788999999999765 47899999999888753    2457999999999999


Q ss_pred             HHHHHHHHHHH-cCCCHHHHHHhhccccccccchhhhhhhh
Q 001898          361 TYAMVSRWRQY-MARCASQISGQTITSNDVLLKDSTRTRKL  400 (998)
Q Consensus       361 TG~vvaLll~l-lGVs~ddIlaDYL~SN~~~~~~~~~~~~~  400 (998)
                      ||+++++|++. .|++.++|++-+-......-...+-.++|
T Consensus       129 sg~~i~ayL~~~~~~s~~~Ai~~~~~~Rp~~i~~~~~~~~L  169 (194)
T d1i9sa_         129 TGFLICAFLVEKMDWSIEAAVATFAQARPPGIYKGDYLKEL  169 (194)
T ss_dssp             HHHHHHHHHHHHHCCCHHHHHHHHHHHSTTCCCCHHHHHHH
T ss_pred             cHHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCCHHHHHHH
Confidence            99997777654 69999999986654444333444444444


No 12 
>d2pt0a1 c.45.1.4 (A:34-346) Myo-inositol hexaphosphate phosphohydrolase (phytase) PhyA {Selenomonas ruminantium [TaxId: 971]}
Probab=98.56  E-value=6.2e-08  Score=104.04  Aligned_cols=74  Identities=18%  Similarity=0.188  Sum_probs=64.7

Q ss_pred             hHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhc-CCCCcEEEeCcCCCChHHHHHHHHHHH--cCCCHHHHHH
Q 001898          308 IDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSN-SSKKPLYLHSKEGVWRTYAMVSRWRQY--MARCASQISG  381 (998)
Q Consensus       308 e~~~~e~~GI~yIhIPV~d~~~ps~e~v~~flelL~d-~~~~PVLVHCtAGKDRTG~vvaLll~l--lGVs~ddIla  381 (998)
                      +.+.++..|+.|+++|+.|...|+.+++..|++++.+ ..+.|++|||.+|++|||++++++++.  .+++.+||++
T Consensus       172 e~~~~e~~g~~Y~ripi~D~~~P~~~~id~~i~~i~~~~~~~~ivvhc~~g~~rt~~~~~~~~~~~~~~~~~~d~i~  248 (313)
T d2pt0a1         172 EQEVAEAAGMRYFRIAATDHVWPTPENIDRFLAFYRTLPQDAWLHFHCEAGVGRTTAFMVMTDMLKNPSVSLKDILY  248 (313)
T ss_dssp             HHHHHHHTTCEEEEEEECTTSCCCHHHHHHHHHHHHTCCTTCEEEEECSSSSHHHHHHHHHHHHHHCTTSCHHHHHH
T ss_pred             HHHHHHhhCceEEEecCCCCCCCCHHHHHHHHHHHHhCCCCCCEEEECCCCCcHHHHHHHHHHHHHccCCCHHHHHH
Confidence            4567788999999999999999999999999999965 346799999999999999998887665  4688999987


No 13 
>d1d5ra2 c.45.1.1 (A:14-187) Phoshphoinositide phosphatase Pten (Pten tumor suppressor), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.40  E-value=2.1e-07  Score=90.95  Aligned_cols=85  Identities=20%  Similarity=0.259  Sum_probs=65.5

Q ss_pred             CCcEEEEcCCCCcCCCchhHhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHh----cCCCCcEEEeCcCCCChHH
Q 001898          287 GYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVS----NSSKKPLYLHSKEGVWRTY  362 (998)
Q Consensus       287 GIKTVIDLRsee~ee~~~~a~e~~~~e~~GI~yIhIPV~d~~~ps~e~v~~flelL~----d~~~~PVLVHCtAGKDRTG  362 (998)
                      +.-.|+||....    .|.      ....+.+++++|+.|...|+.+.+..|.+.+.    ...+.+|+|||++|++|||
T Consensus        50 ~~~~v~nl~~~~----~y~------~~~~~~~~~~~~~~d~~~Ps~~~i~~~~~~~~~~~~~~~~~~v~VHC~~G~gRSg  119 (174)
T d1d5ra2          50 NHYKIYNLCAER----HYD------TAKFNCRVAQYPFEDHNPPQLELIKPFCEDLDQWLSEDDNHVAAIHCKAGKGRTG  119 (174)
T ss_dssp             SCEEEEEEESSC----CCC------TTSCSSCEEEEEECTTSCCCHHHHHHHHHHHHHHHTTTSCSEEEEECSSSSHHHH
T ss_pred             CcEEEEecccCC----CCC------hHHcCCeEEEeCCCCCCCcCHHHHHHHHHHHHHHhccCCCCEEEEEeCCCcchhH
Confidence            667788886543    121      13457889999999999999999888877653    2345689999999999999


Q ss_pred             HHHHHHHHHcC--CCHHHHHH
Q 001898          363 AMVSRWRQYMA--RCASQISG  381 (998)
Q Consensus       363 ~vvaLll~llG--Vs~ddIla  381 (998)
                      +++++++...|  .+.++|++
T Consensus       120 ~~~~ayL~~~~~~~~~~~al~  140 (174)
T d1d5ra2         120 VMICAYLLHRGKFLKAQEALD  140 (174)
T ss_dssp             HHHHHHHHHHTSCSSHHHHHH
T ss_pred             HHHHHHHHHHcCCCCHHHHHH
Confidence            99988887665  48888875


No 14 
>d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Staphylococcus aureus [TaxId: 1280]}
Probab=97.58  E-value=0.0038  Score=64.58  Aligned_cols=254  Identities=14%  Similarity=0.147  Sum_probs=125.3

Q ss_pred             CCEEEEEecCCh---hHHHHHHHHHHHHhcCCCeEEEE--cCChhhHhhcCCCCccceeeeccCcccccCCccEEEEEcC
Q 001898          690 PRTVLVLKKPGP---ALMEEAKEVASFLYHQEKMNILV--EPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACLGG  764 (998)
Q Consensus       690 pk~VlIv~K~~~---~~~~~a~~l~~~L~~~~gi~V~v--e~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~DlVIvLGG  764 (998)
                      -|++.||..|..   ...+...++...|.+ .++++-+  .+...+....             -.....+.+|+||+.||
T Consensus         2 ~kr~~vi~NP~SG~~~~~~~~~~~~~~l~~-~~~~~~~~~t~~~~~~~~~-------------~~~~~~~~~d~ivv~GG   67 (312)
T d2qv7a1           2 RKRARIIYNPTSGKEQFKRELPDALIKLEK-AGYETSAYATEKIGDATLE-------------AERAMHENYDVLIAAGG   67 (312)
T ss_dssp             CEEEEEEECTTSTTSCHHHHHHHHHHHHHH-TTEEEEEEECCSTTHHHHH-------------HHHHTTTTCSEEEEEEC
T ss_pred             CceEEEEECcCCCCCcHHHHHHHHHHHHHH-CCCeEEEEEcCCccHHHHH-------------HHHHHHcCCCEEEEEcC
Confidence            478888888763   344556677777754 3665533  2221111000             00112356899999999


Q ss_pred             CchHHHHHHhccCC--CCcEEEEeCCCCcccC-CCC-cccHHHHHHHHHccCCC-CCceeeeeeeEEEEEEEe-CCeec-
Q 001898          765 DGVILHASNLFRGA--VPPVISFNLGSLGFLT-SHP-FEDYRQDLRQVIYGNNT-LDGVYITLRMRLCCEIFR-NGKAM-  837 (998)
Q Consensus       765 DGTlL~Aar~~~~~--~~PVLGINlG~LGFLt-~~~-~eel~~~L~~il~G~~~-i~~~~i~~R~rL~~~V~r-~G~~v-  837 (998)
                      |||+=.++.-+...  .+|+.=|-+|+---++ .+. +.++.++++.+.+|... +|...+..|..+....+- ..... 
T Consensus        68 DGTv~~v~~~l~~~~~~~~l~iiP~GTgN~~ar~l~~~~~~~~al~~~~~~~~~~id~~~v~~~~f~~~~~~G~~a~~~~  147 (312)
T d2qv7a1          68 DGTLNEVVNGIAEKPNRPKLGVIPMGTVNDFGRALHIPNDIMGALDVIIEGHSTKVDIGKMNNRYFINLAAGGQLTQVSY  147 (312)
T ss_dssp             HHHHHHHHHHHTTCSSCCEEEEEECSSCCHHHHHTTCCSSHHHHHHHHHHTCEEEEEEEEETTEEESSEEEEECBCC---
T ss_pred             CcHHHHHHHHHHhhccccceEEeecCCCCcchhhccccchHHHHHHhhhcCCcEEecccccCccceeeeeeeehhhHHHH
Confidence            99999999876433  3555445777632221 122 46788889989888621 000011111111100000 00000 


Q ss_pred             ---------CCcccceeeeEEEecCCCCeeEEEEEEECCEEeeeEeecEeEEcCCCChhHHhhhcCCCCcCCCCC----c
Q 001898          838 ---------PGKVFDVLNEVVVDRGSNPYLSKIECYEHDRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVP----C  904 (998)
Q Consensus       838 ---------~~~~~~ALNDVvI~Rg~~~~~~~i~V~IDge~v~~~rgDGLIVSTPTGSTAYsLSAGGPIV~P~v~----a  904 (998)
                               .+...|.+-=+..-..  .+...+.+.+||+.+   +++.++++...+.    .-.||..+.|...    .
T Consensus       148 ~~~~~~~~~~~~~~y~~~~~~~l~~--~~~~~~~i~~dg~~~---~~~~~~~~v~n~~----~~ggg~~i~p~a~~~DG~  218 (312)
T d2qv7a1         148 ETPSKLKSIVGPFAYYIKGFEMLPQ--MKAVDLRIEYDGNVF---QGEALLFFLGLTN----SMAGFEKLVPDAKLDDGY  218 (312)
T ss_dssp             ----------CGGGSCCCTTTTGGG--BCCEEEEEEETTEEE---EEEEEEEEEESSC----CCSSCSCSSTTCCSSSSC
T ss_pred             HHHHhhhccccchHHHHHHHHHhhc--cCceEEEeecCCcce---ecceeeeeeeccc----ccCCCCccCCccccccCc
Confidence                     0000000000000000  123567888899864   5556665433331    2345555666532    2


Q ss_pred             eeeEEeCCCC-----------CC----CCC-eEeCCCCEEEEEEcCCCCccEEEEEcCccccccCCCCEEEEEeeCceee
Q 001898          905 MLFTPICPHS-----------LS----FRP-VILPDSARLELKIPDDARSNAWVSFDGKRRQQLSRGDSVRIFMSEHPIP  968 (998)
Q Consensus       905 illTPIcPHs-----------Ls----~RP-IVlp~~s~I~I~v~~~~r~~~~vsiDG~~~~~L~~Gd~V~I~~S~~~l~  968 (998)
                      +-++-+.+.+           ..    ..| +..-...+|+|+..    ....+.+||......    .++|+..+..++
T Consensus       219 l~v~~~~~~~~~~l~~~~~~~~~G~~~~~~~v~~~~~~~i~I~~~----~~~~~~iDGE~~~~~----p~~i~v~p~al~  290 (312)
T d2qv7a1         219 FTLIIVEKSNLAELGHIMTLASRGEHTKHPKVIYEKAKAINISSF----TDLQLNVDGEYGGKL----PANFLNLERHID  290 (312)
T ss_dssp             EEEEEEECCCHHHHHHHHHHHTTTCGGGSTTEEEEEESEEEEECS----SCCEEEETTEEEEES----CEEEEEEEEEEE
T ss_pred             ceEEEEcCCCHHHHHHHHHHHhcCCcCCCCCEEEEEeCEEEEEeC----CCCEEEEcCCCCCCC----ceEEEEECCEEE
Confidence            4444332211           00    112 22222345555532    245688999865332    488999999999


Q ss_pred             EEecCC
Q 001898          969 TVNKSD  974 (998)
Q Consensus       969 lV~~~~  974 (998)
                      ++.+.+
T Consensus       291 vlvP~~  296 (312)
T d2qv7a1         291 VFAPND  296 (312)
T ss_dssp             EECCTT
T ss_pred             EECCCC
Confidence            997653


No 15 
>d2bona1 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia coli [TaxId: 562]}
Probab=97.16  E-value=0.013  Score=60.13  Aligned_cols=59  Identities=29%  Similarity=0.344  Sum_probs=39.8

Q ss_pred             CCccEEEEEcCCchHHHHHHhc---cCCCCcEEEE-eCCCCcccC-CCC-cccHHHHHHHHHccC
Q 001898          754 ERVDFVACLGGDGVILHASNLF---RGAVPPVISF-NLGSLGFLT-SHP-FEDYRQDLRQVIYGN  812 (998)
Q Consensus       754 ~~~DlVIvLGGDGTlL~Aar~~---~~~~~PVLGI-NlG~LGFLt-~~~-~eel~~~L~~il~G~  812 (998)
                      +++|.||+.|||||+=.+++-+   .....|.||| -+|+---++ .+. +.++.++++.+++|.
T Consensus        52 ~~~d~Ivv~GGDGTv~ev~~gl~~~~~~~~p~lgilP~GTgN~~Ar~lg~~~~~~~a~~~i~~g~  116 (295)
T d2bona1          52 FGVATVIAGGGDGTINEVSTALIQCEGDDIPALGILPLGTANDFATSVGIPEALDKALKLAIAGD  116 (295)
T ss_dssp             HTCSEEEEEESHHHHHHHHHHHHHCCSSCCCEEEEEECSSSCHHHHHTTCCSSHHHHHHHHHHSE
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHhccCCCCceEEEEECCcccchHHHcCCCcchhhhhhhhcccc
Confidence            4689999999999998887654   2334566766 566532221 111 356788888888875


No 16 
>d1g4us2 c.45.1.2 (S:297-539) SptP tyrosine phosphatase, catalytic domain {Salmonella typhimurium [TaxId: 90371]}
Probab=96.23  E-value=0.0052  Score=62.04  Aligned_cols=51  Identities=27%  Similarity=0.234  Sum_probs=33.8

Q ss_pred             CHHHHHHHHHHHhcC-----------CCCcEEEeCcCCCChHHHHHHHHHHH--cCCCHHHHHH
Q 001898          331 TMEQVEKFASLVSNS-----------SKKPLYLHSKEGVWRTYAMVSRWRQY--MARCASQISG  381 (998)
Q Consensus       331 s~e~v~~flelL~d~-----------~~~PVLVHCtAGKDRTG~vvaLll~l--lGVs~ddIla  381 (998)
                      +.+.+..+++.+...           .++|++|||.+|.+|||+++++....  .-++..+++.
T Consensus       151 ~~~~l~~li~~v~~~~~~~~~~~~~~~~~PivVHCsaGvGRTGtf~a~~~l~~~~~vdv~~iv~  214 (243)
T d1g4us2         151 STDQLEYLADRVKNSNQNGAPGRSSSDKHLPMIHCLGGVGRTGTMAAALVLKDNPHSNLEQVRA  214 (243)
T ss_dssp             CHHHHHHHHHHHHC-------------CCCEEEECSSSSSHHHHHHHHHHHHHCTTCCHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHhhhhcccCCCCCCEEEEECCCCCcchHHHHHHHHHhcCCCCHHHHHH
Confidence            466777777766421           24699999999999999998765432  2344444433


No 17 
>d1lyva_ c.45.1.2 (A:) Protein-tyrosine phosphatase YopH, catalytic domain {Yersinia enterocolitica [TaxId: 630]}
Probab=96.00  E-value=0.0044  Score=63.87  Aligned_cols=25  Identities=32%  Similarity=0.335  Sum_probs=20.9

Q ss_pred             CCCcEEEeCcCCCChHHHHHHHHHH
Q 001898          346 SKKPLYLHSKEGVWRTYAMVSRWRQ  370 (998)
Q Consensus       346 ~~~PVLVHCtAGKDRTG~vvaLll~  370 (998)
                      ..+|++|||.+|.+|||+++++...
T Consensus       210 ~~~PivVHCs~GvGRtGtfia~~~~  234 (283)
T d1lyva_         210 SKLRPVIHSRAGVGRTAQLIGAMCM  234 (283)
T ss_dssp             TSSCCEEECSSSSSHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHH
Confidence            4579999999999999999766543


No 18 
>d1wcha_ c.45.1.2 (A:) Tyrosine-protein phosphatase, non-receptor type 13 (PTPL1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.45  E-value=0.0057  Score=64.23  Aligned_cols=39  Identities=15%  Similarity=0.253  Sum_probs=30.4

Q ss_pred             CHHHHHHHHHHHhc-CCCCcEEEeCcCCCChHHHHHHHHH
Q 001898          331 TMEQVEKFASLVSN-SSKKPLYLHSKEGVWRTYAMVSRWR  369 (998)
Q Consensus       331 s~e~v~~flelL~d-~~~~PVLVHCtAGKDRTG~vvaLll  369 (998)
                      +...+..|++.+.. ...+|++|||.+|.+|||+++++..
T Consensus       215 ~~~~~l~~l~~v~~~~~~~PivVHCsaGvGRtG~fia~d~  254 (308)
T d1wcha_         215 QPDDLLTFISYMRHIHRSGPIITHCSAGIGRSGTLICIDV  254 (308)
T ss_dssp             CHHHHHHHHHHHHHHCCSSCEEEECSSSSHHHHHHHHHHH
T ss_pred             CchhHHHHHHHHHHhccCCcEEEEeccccchhHHHHHHHH
Confidence            46677777776653 4567999999999999999976543


No 19 
>d1jlna_ c.45.1.2 (A:) Tyrosine phosphatase {Mouse (Mus musculus), ptp-sl/br7 [TaxId: 10090]}
Probab=95.10  E-value=0.012  Score=61.21  Aligned_cols=40  Identities=15%  Similarity=0.246  Sum_probs=28.6

Q ss_pred             CHHHHHHHHHHHhc-----CCCCcEEEeCcCCCChHHHHHHHHHH
Q 001898          331 TMEQVEKFASLVSN-----SSKKPLYLHSKEGVWRTYAMVSRWRQ  370 (998)
Q Consensus       331 s~e~v~~flelL~d-----~~~~PVLVHCtAGKDRTG~vvaLll~  370 (998)
                      +...+..|+..+..     ...+|++|||.+|.+|||+++++...
T Consensus       201 ~~~~~l~~i~~v~~~~~~~~~~~PivVHCsaGvGRtG~fial~~~  245 (297)
T d1jlna_         201 SAQPLLQLMLDVEEDRLASEGRGPVVVHCSAGIGRTGCFIATSIG  245 (297)
T ss_dssp             CSHHHHHHHHHHHHHHHTCTTSCCEEEESSSSSHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHhcccCCCceEEEecccccchhHHHHHHHH
Confidence            44556666554432     34679999999999999999776543


No 20 
>d1rpma_ c.45.1.2 (A:) Tyrosine phosphatase {Human (Homo sapiens), mu [TaxId: 9606]}
Probab=94.85  E-value=0.017  Score=59.12  Aligned_cols=40  Identities=23%  Similarity=0.204  Sum_probs=29.1

Q ss_pred             CHHHHHHHHHHHhc---CCCCcEEEeCcCCCChHHHHHHHHHH
Q 001898          331 TMEQVEKFASLVSN---SSKKPLYLHSKEGVWRTYAMVSRWRQ  370 (998)
Q Consensus       331 s~e~v~~flelL~d---~~~~PVLVHCtAGKDRTG~vvaLll~  370 (998)
                      +...+.+|++.+..   ...+|++|||.+|.+|||+++++...
T Consensus       191 ~~~~~l~~i~~v~~~~~~~~~PivVHCs~G~gRsG~f~al~~~  233 (278)
T d1rpma_         191 HATGLLGFVRQVKSKSPPSAGPLVVHCSAGAGRTGCFIVIDIM  233 (278)
T ss_dssp             CSHHHHHHHHHHHHHSCTTSCCEEEESSSSSHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHhCCCCCCEEEEeCCCchhhhHHHHHHHH
Confidence            45566666665532   23679999999999999999766543


No 21 
>d1lara1 c.45.1.2 (A:1307-1623) RPTP Lar {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.81  E-value=0.013  Score=61.44  Aligned_cols=38  Identities=21%  Similarity=0.189  Sum_probs=28.5

Q ss_pred             CHHHHHHHHHHHh---cCCCCcEEEeCcCCCChHHHHHHHH
Q 001898          331 TMEQVEKFASLVS---NSSKKPLYLHSKEGVWRTYAMVSRW  368 (998)
Q Consensus       331 s~e~v~~flelL~---d~~~~PVLVHCtAGKDRTG~vvaLl  368 (998)
                      +.+.+.+|++.+.   ....+|++|||.+|.+|||+++++.
T Consensus       190 ~~~~~l~~i~~v~~~~~~~~~PivVHCs~GvGRtG~f~al~  230 (317)
T d1lara1         190 YPTPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGCFIVID  230 (317)
T ss_dssp             CSHHHHHHHHHHHHHSCTTCCCEEEESSSSSSHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHhhcCCCCcEEEEecccccceeeeehhH
Confidence            4566666666653   2346799999999999999997654


No 22 
>d2shpa1 c.45.1.2 (A:219-525) Tyrosine phosphatase {Human (Homo sapiens), shp-2 [TaxId: 9606]}
Probab=94.77  E-value=0.013  Score=61.21  Aligned_cols=38  Identities=21%  Similarity=0.212  Sum_probs=28.1

Q ss_pred             CHHHHHHHHHHHhc-----CCCCcEEEeCcCCCChHHHHHHHH
Q 001898          331 TMEQVEKFASLVSN-----SSKKPLYLHSKEGVWRTYAMVSRW  368 (998)
Q Consensus       331 s~e~v~~flelL~d-----~~~~PVLVHCtAGKDRTG~vvaLl  368 (998)
                      +...+..|++.+..     ...+|++|||.+|.+|||+++++.
T Consensus       213 ~~~~ll~li~~v~~~~~~~~~~~PivVHCs~GvgRtGtfia~~  255 (307)
T d2shpa1         213 DPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVID  255 (307)
T ss_dssp             CHHHHHHHHHHHHHHHHHSTTCCCEEEECSSSSHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHhhcccCCCCEEEEeCCCCcHHHHHHHHH
Confidence            45666666665531     245799999999999999997654


No 23 
>d1lara2 c.45.1.2 (A:1628-1876) RPTP Lar {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.31  E-value=0.032  Score=56.03  Aligned_cols=38  Identities=24%  Similarity=0.266  Sum_probs=27.8

Q ss_pred             HHHHHHHHHHHhc-----CCCCcEEEeCcCCCChHHHHHHHHH
Q 001898          332 MEQVEKFASLVSN-----SSKKPLYLHSKEGVWRTYAMVSRWR  369 (998)
Q Consensus       332 ~e~v~~flelL~d-----~~~~PVLVHCtAGKDRTG~vvaLll  369 (998)
                      ...+.+|++.+..     ..++|++|||.+|.+|||+++++..
T Consensus       159 ~~~~~~li~~v~~~~~~~~~~~pivVhc~~G~gRsg~f~~~~~  201 (249)
T d1lara2         159 GEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSI  201 (249)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCCSCEEEESSSSSSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhhcCCCCcEEEECCCCCeeehHHHHHHH
Confidence            4556666555431     3567999999999999999976553


No 24 
>d1yfoa_ c.45.1.2 (A:) Tyrosine phosphatase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.29  E-value=0.017  Score=59.48  Aligned_cols=40  Identities=25%  Similarity=0.142  Sum_probs=29.4

Q ss_pred             CHHHHHHHHHHHhc---CCCCcEEEeCcCCCChHHHHHHHHHH
Q 001898          331 TMEQVEKFASLVSN---SSKKPLYLHSKEGVWRTYAMVSRWRQ  370 (998)
Q Consensus       331 s~e~v~~flelL~d---~~~~PVLVHCtAGKDRTG~vvaLll~  370 (998)
                      +...+.+|++.+..   ..+.|++|||.+|.+|||+++++...
T Consensus       200 ~~~~~l~l~~~v~~~~~~~~~PivVHCs~G~gRtG~f~al~~~  242 (288)
T d1yfoa_         200 TPIGMLKFLKKVKACNPQYAGAIVVHCSAGVGRTGTFVVIDAM  242 (288)
T ss_dssp             CSHHHHHHHHHHHHHSCTTSCCEEEECSSSSHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHhccccCCcEEEEeCCCCcccHHHHHHHHH
Confidence            35566666665532   34679999999999999999766543


No 25 
>d1l8ka_ c.45.1.2 (A:) Tyrosine phosphatase {Human (Homo sapiens), T-cell [TaxId: 9606]}
Probab=94.23  E-value=0.019  Score=58.56  Aligned_cols=39  Identities=15%  Similarity=0.112  Sum_probs=27.6

Q ss_pred             HHHHHHHHHHHhc-----CCCCcEEEeCcCCCChHHHHHHHHHH
Q 001898          332 MEQVEKFASLVSN-----SSKKPLYLHSKEGVWRTYAMVSRWRQ  370 (998)
Q Consensus       332 ~e~v~~flelL~d-----~~~~PVLVHCtAGKDRTG~vvaLll~  370 (998)
                      ...+..|+..+..     ...+|++|||.+|.+|||+++++...
T Consensus       185 ~~~~~~l~~~v~~~~~~~~~~~PivVHCs~GvgRtGtf~al~~~  228 (273)
T d1l8ka_         185 PASFLNFLFKVRESGSLNPDHGPAVIHCSAGIGRSGTFSLVDTC  228 (273)
T ss_dssp             SHHHHHHHHHHHHTTTTSTTSCCEEEEESSSSSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhccCCCCceEEEEecccccceehHHHHHHH
Confidence            4455556555432     23469999999999999999776543


No 26 
>d2f71a1 c.45.1.2 (A:2-298) Tyrosine phosphatase {Human (Homo sapiens), 1B [TaxId: 9606]}
Probab=94.21  E-value=0.017  Score=59.80  Aligned_cols=37  Identities=16%  Similarity=0.238  Sum_probs=27.4

Q ss_pred             CHHHHHHHHHHHhc-----CCCCcEEEeCcCCCChHHHHHHH
Q 001898          331 TMEQVEKFASLVSN-----SSKKPLYLHSKEGVWRTYAMVSR  367 (998)
Q Consensus       331 s~e~v~~flelL~d-----~~~~PVLVHCtAGKDRTG~vvaL  367 (998)
                      +...+..|++.+..     ...+|++|||.+|.+|||+++++
T Consensus       186 ~~~~~l~l~~~v~~~~~~~~~~~PivVHCs~G~gRtGtf~al  227 (297)
T d2f71a1         186 SPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLA  227 (297)
T ss_dssp             CHHHHHHHHHHHHHTTTTCTTSCCEEEECSSSSHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHhhccCCCCceEEEeeccccCceehhHHH
Confidence            45566666665542     23469999999999999999765


No 27 
>d1fpra_ c.45.1.2 (A:) Tyrosine phosphatase {Human (Homo sapiens), shp-1 [TaxId: 9606]}
Probab=94.18  E-value=0.019  Score=58.91  Aligned_cols=37  Identities=22%  Similarity=0.280  Sum_probs=26.7

Q ss_pred             HHHHHHHHHHHhc-----CCCCcEEEeCcCCCChHHHHHHHH
Q 001898          332 MEQVEKFASLVSN-----SSKKPLYLHSKEGVWRTYAMVSRW  368 (998)
Q Consensus       332 ~e~v~~flelL~d-----~~~~PVLVHCtAGKDRTG~vvaLl  368 (998)
                      ...+..|++.+..     ...+||+|||.+|.+|||+++++.
T Consensus       184 ~~~~l~l~~~v~~~~~~~~~~~PivVHCs~G~gRtG~fial~  225 (284)
T d1fpra_         184 PGGVLSFLDQINQRQESLPHAGPIIVHSSAGIGRTGTIIVID  225 (284)
T ss_dssp             SHHHHHHHHHHHHHHTTSTTCCCEEEESSBSSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCCCCCEEEEeCCCCccchHHHHHH
Confidence            3556666655532     124699999999999999997654


No 28 
>d1p15a_ c.45.1.2 (A:) Protein-tyrosine phosphatase alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.86  E-value=0.021  Score=57.28  Aligned_cols=38  Identities=18%  Similarity=0.237  Sum_probs=27.0

Q ss_pred             HHHHHHHHHHh----cCCCCcEEEeCcCCCChHHHHHHHHHH
Q 001898          333 EQVEKFASLVS----NSSKKPLYLHSKEGVWRTYAMVSRWRQ  370 (998)
Q Consensus       333 e~v~~flelL~----d~~~~PVLVHCtAGKDRTG~vvaLll~  370 (998)
                      ..+..|++.+.    ...++|++|||.+|.+|||+++++...
T Consensus       158 ~~~l~~~~~v~~~~~~~~~~PivVHCs~G~gRsg~f~a~~~~  199 (245)
T d1p15a_         158 KGMINIIAAVQKQQQQSGNHPITVHCSAGAGRTGTFCALSTV  199 (245)
T ss_dssp             CSHHHHHHHHHHHTTTTTSCCEEEESSSSSHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhccCCCCCEEEEcCCCCccccHHHHHHHH
Confidence            34555555442    234579999999999999999776543


No 29 
>d1tq1a_ c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senescence-associated protein {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=90.96  E-value=0.054  Score=48.47  Aligned_cols=83  Identities=13%  Similarity=0.187  Sum_probs=48.8

Q ss_pred             CHhhHHHHHhcCCcEEEEcCCCCcCCCchhHhhHHhhhcCCcEEEEEecCCCC----CCCHHHHHHHHHHHhcCCCCcEE
Q 001898          276 TEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRT----APTMEQVEKFASLVSNSSKKPLY  351 (998)
Q Consensus       276 T~eDl~~L~elGIKTVIDLRsee~ee~~~~a~e~~~~e~~GI~yIhIPV~d~~----~ps~e~v~~flelL~d~~~~PVL  351 (998)
                      +.+....|.+.|.. +||.|++.  +  |     ..-...|.  +++|+....    ....+.+.++...+  ..+.+|+
T Consensus        11 ~~~~a~~l~~~g~~-liDvR~~~--e--~-----~~ghi~ga--~~ip~~~~~~~~~~~~~~~~~~~~~~~--~~~~~iv   76 (119)
T d1tq1a_          11 SVTVAHDLLLAGHR-YLDVRTPE--E--F-----SQGHACGA--INVPYMNRGASGMSKNTDFLEQVSSHF--GQSDNII   76 (119)
T ss_dssp             EHHHHHHHHHHTCC-EEEESCHH--H--H-----HHCCBTTB--EECCSCCCSTTTCCCTTTHHHHHTTTC--CTTSSEE
T ss_pred             CHHHHHHHHHCcCE-EEECCCHH--H--H-----HcCCCCCc--cchhhcccccccccccHHHHHHHHHhc--CCCcEEE
Confidence            56667777777874 89999864  1  1     11222344  567764321    12233344444333  3567999


Q ss_pred             EeCcCCCChHHHHHHHHHHHcCC
Q 001898          352 LHSKEGVWRTYAMVSRWRQYMAR  374 (998)
Q Consensus       352 VHCtAGKDRTG~vvaLll~llGV  374 (998)
                      +||..|. |+..++..+.. +|.
T Consensus        77 ~~C~~G~-rs~~a~~~L~~-~G~   97 (119)
T d1tq1a_          77 VGCQSGG-RSIKATTDLLH-AGF   97 (119)
T ss_dssp             EEESSCS-HHHHHHHHHHH-HHC
T ss_pred             EEcCCcC-cHHHHHHHHHh-ccc
Confidence            9999998 87776555543 454


No 30 
>d1yt8a4 c.46.1.2 (A:243-372) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=90.79  E-value=0.2  Score=45.38  Aligned_cols=79  Identities=22%  Similarity=0.222  Sum_probs=48.1

Q ss_pred             CCHhhHHHHHhcC-C-cEEEEcCCCCcCCCchhHhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhcCCCCcEEE
Q 001898          275 VTEEGLKWLMEKG-Y-KTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSNSSKKPLYL  352 (998)
Q Consensus       275 pT~eDl~~L~elG-I-KTVIDLRsee~ee~~~~a~e~~~~e~~GI~yIhIPV~d~~~ps~e~v~~flelL~d~~~~PVLV  352 (998)
                      ++.+++..+...+ - -.|||.|+.+  +  +     ..-...|.  +++|..        .+......+....++|+++
T Consensus        25 I~~~e~~~~l~~~~~~~~liDvR~~~--e--~-----~~ghipga--i~~p~~--------~~~~~~~~~~~~~~~~ivl   85 (130)
T d1yt8a4          25 LDLAGLAQWQDEHDRTTYLLDVRTPE--E--Y-----EAGHLPGS--RSTPGG--------QLVQETDHVASVRGARLVL   85 (130)
T ss_dssp             ECHHHHHHHHHCTTSCEEEEECSCHH--H--H-----HHCBCTTC--EECCHH--------HHHHSHHHHCCSBTCEEEE
T ss_pred             cCHHHHHHHHHccCCCEEEEECCCcH--H--H-----hcCccCCc--cccccc--------ccccccccccCCccceEEe
Confidence            5788888777653 3 3688999974  0  1     11112232  444432        4444444443345779999


Q ss_pred             eCcCCCChHHHHHHHHHHHcCC
Q 001898          353 HSKEGVWRTYAMVSRWRQYMAR  374 (998)
Q Consensus       353 HCtAGKDRTG~vvaLll~llGV  374 (998)
                      +|..|. |+..++..+.. +|.
T Consensus        86 ~C~~G~-rS~~aa~~L~~-~G~  105 (130)
T d1yt8a4          86 VDDDGV-RANMSASWLAQ-MGW  105 (130)
T ss_dssp             ECSSSS-HHHHHHHHHHH-TTC
T ss_pred             ecCCCc-cHHHHHHHHHH-cCC
Confidence            999997 98887666654 575


No 31 
>d1yt8a1 c.46.1.2 (A:107-242) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=90.72  E-value=0.24  Score=45.31  Aligned_cols=80  Identities=11%  Similarity=0.145  Sum_probs=49.8

Q ss_pred             CCCHhhHHHHHhcCC-cEEEEcCCCCcCCCchhHhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhcCCCCcEEE
Q 001898          274 QVTEEGLKWLMEKGY-KTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSNSSKKPLYL  352 (998)
Q Consensus       274 qpT~eDl~~L~elGI-KTVIDLRsee~ee~~~~a~e~~~~e~~GI~yIhIPV~d~~~ps~e~v~~flelL~d~~~~PVLV  352 (998)
                      .++++++..+.+.+- -.|||.|+..  +  |     +.-...|.  +|+|..        .+...+.-+....+.||++
T Consensus        25 ~Is~~el~~~l~~~~~~~liDvR~~~--e--~-----~~ghIpGA--i~ip~~--------~l~~~~~~l~~~~~~~iV~   85 (136)
T d1yt8a1          25 SLAAEEVQALLDARAEAVILDARRFD--E--Y-----QTMSIPGG--ISVPGA--------ELVLRVAELAPDPRTRVIV   85 (136)
T ss_dssp             EECHHHHHHHHHTTCSEEEEECSCHH--H--H-----HHSBCTTC--EECCGG--------GHHHHHHHHCCSTTSEEEE
T ss_pred             ccCHHHHHHHHhcCCCcEEEEcCChh--h--c-----cceecCCc--hhhhhh--------HHHHHhhcccccccceEEE
Confidence            468999888776654 3689999864  0  1     11223444  566754        2333333332234679999


Q ss_pred             eCcCCCChHHHHHHHHHHHcCC
Q 001898          353 HSKEGVWRTYAMVSRWRQYMAR  374 (998)
Q Consensus       353 HCtAGKDRTG~vvaLll~llGV  374 (998)
                      +|..|. |+..++..++. +|.
T Consensus        86 ~C~~g~-rs~~aa~~L~~-~G~  105 (136)
T d1yt8a1          86 NCAGRT-RSIIGTQSLLN-AGI  105 (136)
T ss_dssp             ECSSSH-HHHHHHHHHHH-TTC
T ss_pred             EcCCCC-chHHHHHHHHH-cCC
Confidence            999997 88777666554 454


No 32 
>d1gmxa_ c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia coli [TaxId: 562]}
Probab=90.16  E-value=0.16  Score=44.58  Aligned_cols=78  Identities=10%  Similarity=0.106  Sum_probs=48.3

Q ss_pred             CCHhhHHHHHhcCCcEEEEcCCCCcCCCchhHhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhcCCCCcEEEeC
Q 001898          275 VTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSNSSKKPLYLHS  354 (998)
Q Consensus       275 pT~eDl~~L~elGIKTVIDLRsee~ee~~~~a~e~~~~e~~GI~yIhIPV~d~~~ps~e~v~~flelL~d~~~~PVLVHC  354 (998)
                      ++.+++..+.+.+=-.|||.|++.  +  |.     .....|.  +|+|        .+.+..++.-+  ..+.|++++|
T Consensus         7 Is~~e~~~~l~~~~~~liDvR~~~--e--~~-----~ghI~gA--~~ip--------~~~l~~~~~~~--~~~~~ivv~c   65 (108)
T d1gmxa_           7 INVADAHQKLQEKEAVLVDIRDPQ--S--FA-----MGHAVQA--FHLT--------NDTLGAFMRDN--DFDTPVMVMC   65 (108)
T ss_dssp             ECHHHHHHHHHTTCCEEEECSCHH--H--HH-----HCEETTC--EECC--------HHHHHHHHHHS--CTTSCEEEEC
T ss_pred             eCHHHHHHHHHCCCeEEEECCCHH--H--HH-----hcCCCCc--cccc--------chhHHHHhhhc--cccCcccccC
Confidence            467776665555434799999964  0  11     1111222  3444        34666666655  4578999999


Q ss_pred             cCCCChHHHHHHHHHHHcCCC
Q 001898          355 KEGVWRTYAMVSRWRQYMARC  375 (998)
Q Consensus       355 tAGKDRTG~vvaLll~llGVs  375 (998)
                      ..|. |+..++..+.. +|.+
T Consensus        66 ~~g~-rs~~~a~~L~~-~G~~   84 (108)
T d1gmxa_          66 YHGN-SSKGAAQYLLQ-QGYD   84 (108)
T ss_dssp             SSSS-HHHHHHHHHHH-HTCS
T ss_pred             CCCh-HHHHHHHHHHH-cCCC
Confidence            9998 98877666554 4654


No 33 
>d1qxna_ c.46.1.3 (A:) Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud) {Wolinella succinogenes [TaxId: 844]}
Probab=88.65  E-value=0.35  Score=44.31  Aligned_cols=81  Identities=14%  Similarity=0.174  Sum_probs=46.9

Q ss_pred             CCHhhHHHHHhcC-CcEEEEcCCCCcCCCchhHhhHHhhhcCC-cEEEEEecCCCCCCCHHHHHHHHHHHhcCCCCcEEE
Q 001898          275 VTEEGLKWLMEKG-YKTIVDIRAERVKDNFYEAAIDDAILSGK-VELIKIPVEVRTAPTMEQVEKFASLVSNSSKKPLYL  352 (998)
Q Consensus       275 pT~eDl~~L~elG-IKTVIDLRsee~ee~~~~a~e~~~~e~~G-I~yIhIPV~d~~~ps~e~v~~flelL~d~~~~PVLV  352 (998)
                      ++++++..+.+.+ =-.|||.|+++  +  |     +.....+ ...+|+|...        +...++......+.||+|
T Consensus        25 Isp~e~~~ll~~~~~~~lIDvR~~~--E--~-----~~~hip~i~~a~~ip~~~--------l~~~~~~~~~~~~~~ivv   87 (137)
T d1qxna_          25 LSPKDAYKLLQENPDITLIDVRDPD--E--L-----KAMGKPDVKNYKHMSRGK--------LEPLLAKSGLDPEKPVVV   87 (137)
T ss_dssp             ECHHHHHHHHHHCTTSEEEECCCHH--H--H-----HHTCEECCSSEEECCTTT--------SHHHHHHHCCCTTSCEEE
T ss_pred             EcHHHHHHHHHcCcCEEEEECCcHH--H--H-----HHhccccccccccCCccc--------ccccccccccCcccceee
Confidence            5888877665443 24899999864  0  1     1111112 2356777641        222332222245679999


Q ss_pred             eCcCCCChHHHHHHHHHHHcCC
Q 001898          353 HSKEGVWRTYAMVSRWRQYMAR  374 (998)
Q Consensus       353 HCtAGKDRTG~vvaLll~llGV  374 (998)
                      +|..|. |+..++.++.. +|.
T Consensus        88 yC~~G~-rs~~aa~~L~~-~G~  107 (137)
T d1qxna_          88 FCKTAA-RAALAGKTLRE-YGF  107 (137)
T ss_dssp             ECCSSS-CHHHHHHHHHH-HTC
T ss_pred             eecccc-hHHHHHHHHHH-cCC
Confidence            999997 87776665544 464


No 34 
>d1urha2 c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]}
Probab=85.52  E-value=1  Score=39.31  Aligned_cols=96  Identities=13%  Similarity=0.045  Sum_probs=51.7

Q ss_pred             CHhhHHHHHhcCCcEEEEcCCCCcCCCchhHhhHHhhhcCC--cEEEEEecCC----CCCCCHHHHHHHHHHHhcCCCCc
Q 001898          276 TEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGK--VELIKIPVEV----RTAPTMEQVEKFASLVSNSSKKP  349 (998)
Q Consensus       276 T~eDl~~L~elGIKTVIDLRsee~ee~~~~a~e~~~~e~~G--I~yIhIPV~d----~~~ps~e~v~~flelL~d~~~~P  349 (998)
                      +-+++..+.+.+--.|||-|+.++ -.+.. .+.......|  -.-+++|...    ....+.+.+.+.+....-..+.|
T Consensus         7 ~~~ev~~~~~~~~~~liD~R~~~~-f~G~~-~~~~~~~~~G~Ipga~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   84 (120)
T d1urha2           7 KVTDVLLASHENTAQIIDARPAAR-FNAEV-DEPRPGLRRGHIPGALNVPWTELVREGELKTTDELDAIFFGRGVSYDKP   84 (120)
T ss_dssp             CHHHHHHHHHHTCSEEEECSCHHH-HSSCC-CC----CCSSSCTTCEECCGGGGBSSSSBCCHHHHHHHHHTTTCCSSSC
T ss_pred             cHHHHHHHhhCCCcEEEeCCCHHH-cCccc-CCcccccccccccccchhchhhcccccccCCHHHhhhhhhhcccCccCc
Confidence            556666666677779999998741 00000 0000001111  1123444321    12234555665555432345779


Q ss_pred             EEEeCcCCCChHHHHHHHHHHHcCCC
Q 001898          350 LYLHSKEGVWRTYAMVSRWRQYMARC  375 (998)
Q Consensus       350 VLVHCtAGKDRTG~vvaLll~llGVs  375 (998)
                      |+++|.+|. |++.++.++. .+|.+
T Consensus        85 ii~yC~sG~-~A~~~~~~L~-~lG~~  108 (120)
T d1urha2          85 IIVSCGSGV-TAAVVLLALA-TLDVP  108 (120)
T ss_dssp             EEEECCSSS-THHHHHHHHH-HTTCS
T ss_pred             eEEEccchh-HHHHHHHHHH-HcCCC
Confidence            999999999 8887766554 46764


No 35 
>d1rhsa2 c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [TaxId: 9913]}
Probab=82.30  E-value=2  Score=39.47  Aligned_cols=93  Identities=16%  Similarity=0.118  Sum_probs=51.4

Q ss_pred             CHhhHHHHHhcCCcEEEEcCCCCcCCCchhHhhHHhhhcCCcEE------EEEecCC-----CCCCCHHHHHHHHHHHhc
Q 001898          276 TEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVEL------IKIPVEV-----RTAPTMEQVEKFASLVSN  344 (998)
Q Consensus       276 T~eDl~~L~elGIKTVIDLRsee~ee~~~~a~e~~~~e~~GI~y------IhIPV~d-----~~~ps~e~v~~flelL~d  344 (998)
                      +-+++....+.+=-.|||-|+.++    |. -........+++.      +++|...     ....+.+.+.++++..--
T Consensus        14 ~~~ev~~~l~~~~~~iiD~R~~~e----f~-G~~~~~~~~~~~~GhIpgA~~ip~~~~~~~~~~~~~~~~l~~~~~~~gi   88 (144)
T d1rhsa2          14 TYEQVLENLESKRFQLVDSRAQGR----YL-GTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPEELRAMFEAKKV   88 (144)
T ss_dssp             CHHHHHHHHHHCCSEEEECSCHHH----HH-TSSCCSSSSSCCCCEETTCEECCGGGGBCTTSCBCCHHHHHHHHHHTTC
T ss_pred             cHHHHHHHhcCCCcEEEECCCCHH----Hc-CCCCCCccccceeeehhhhhhcchhhhhhhhcccCCHHHHHHHHHHcCC
Confidence            566665444444467999998741    10 0000001111222      3344321     123456777777665432


Q ss_pred             CCCCcEEEeCcCCCChHHHHHHHHHHHcCCC
Q 001898          345 SSKKPLYLHSKEGVWRTYAMVSRWRQYMARC  375 (998)
Q Consensus       345 ~~~~PVLVHCtAGKDRTG~vvaLll~llGVs  375 (998)
                      ..+.+|+++|.+|. |+..++..+ ..+|.+
T Consensus        89 ~~~~~iI~yC~sG~-~A~~~~~~l-~~lG~~  117 (144)
T d1rhsa2          89 DLTKPLIATCRKGV-TACHIALAA-YLCGKP  117 (144)
T ss_dssp             CTTSCEEEECSSSS-THHHHHHHH-HHTTCC
T ss_pred             CCCCCEEEEecccc-hHHHHHHHH-HHcCCC
Confidence            45679999999998 888776554 456765


No 36 
>d1zsqa2 c.45.1.3 (A:199-585) Myotubularin-related protein 2, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.21  E-value=1.4  Score=47.39  Aligned_cols=27  Identities=30%  Similarity=0.238  Sum_probs=23.0

Q ss_pred             CCCCcEEEeCcCCCChHHHHHHHHHHH
Q 001898          345 SSKKPLYLHSKEGVWRTYAMVSRWRQY  371 (998)
Q Consensus       345 ~~~~PVLVHCtAGKDRTG~vvaLll~l  371 (998)
                      ..+.+|||||..|.|||..+.+|...+
T Consensus       210 ~~~~sVlVh~sdGwD~T~qvsSL~ql~  236 (387)
T d1zsqa2         210 SGKTSVVVHSSDGWDRTAQLTSLAMLM  236 (387)
T ss_dssp             TTCCCEEEECSSSSSHHHHHHHHHHHH
T ss_pred             hCCCeEEEeCCCCCchhHHHHHHHHHH
Confidence            445699999999999999998887663


No 37 
>d1yt8a3 c.46.1.2 (A:373-529) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=74.71  E-value=1.5  Score=40.52  Aligned_cols=75  Identities=9%  Similarity=0.027  Sum_probs=45.2

Q ss_pred             CCCHhhHHHHHhcCCcEEEEcCCCCcCCCchhHhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhcCCCCcEEEe
Q 001898          274 QVTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSNSSKKPLYLH  353 (998)
Q Consensus       274 qpT~eDl~~L~elGIKTVIDLRsee~ee~~~~a~e~~~~e~~GI~yIhIPV~d~~~ps~e~v~~flelL~d~~~~PVLVH  353 (998)
                      .++++++..+.+.+=-.|||.|+..    .|     ......|-  +++|..        .+......+  ..+.||+++
T Consensus         6 ~Is~~el~~~l~~~~~~ivDvR~~~----e~-----~~ghIpga--~~~~~~--------~~~~~~~~~--~~~~~vv~~   64 (157)
T d1yt8a3           6 TIDPTTLADWLGEPGTRVLDFTASA----NY-----AKRHIPGA--AWVLRS--------QLKQALERL--GTAERYVLT   64 (157)
T ss_dssp             EECHHHHHHHTTSTTEEEEECSCHH----HH-----HHCBCTTC--EECCGG--------GHHHHHHHH--CCCSEEEEE
T ss_pred             EECHHHHHHHHhCCCeEEEEeCCHH----HH-----hhcccccc--eecccc--------ccccccccc--ccCcceeec
Confidence            3588888877766556899999864    01     11111222  223332        233333333  457799999


Q ss_pred             CcCCCChHHHHHHHHHH
Q 001898          354 SKEGVWRTYAMVSRWRQ  370 (998)
Q Consensus       354 CtAGKDRTG~vvaLll~  370 (998)
                      |..|. |+..++..++.
T Consensus        65 c~~g~-rs~~~a~~l~~   80 (157)
T d1yt8a3          65 CGSSL-LARFAVAEVQA   80 (157)
T ss_dssp             CSSSH-HHHHHHHHHHH
T ss_pred             cCCcc-hHHHHHHHHhc
Confidence            99998 88777665554


No 38 
>d1yt8a2 c.46.1.2 (A:6-106) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=74.38  E-value=3.9  Score=34.35  Aligned_cols=79  Identities=11%  Similarity=0.140  Sum_probs=44.1

Q ss_pred             CHhhHHH-HHhcCCcEEEEcCCCCcCCCchhHhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhcCCCCcEEEeC
Q 001898          276 TEEGLKW-LMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSNSSKKPLYLHS  354 (998)
Q Consensus       276 T~eDl~~-L~elGIKTVIDLRsee~ee~~~~a~e~~~~e~~GI~yIhIPV~d~~~ps~e~v~~flelL~d~~~~PVLVHC  354 (998)
                      |.++++. |.+..=-.|||.|+..+    |.     .-...|.  +++|..        .+...+..+......||+++|
T Consensus         5 S~~~l~~~l~~~~~~~liDvR~~~e----~~-----~ghIpgA--i~~~~~--------~~~~~~~~~~~~~~~~vv~~~   65 (101)
T d1yt8a2           5 TFHDIRAALLARRELALLDVREEDP----FA-----QAHPLFA--ANLPLS--------RLELEIHARVPRRDTPITVYD   65 (101)
T ss_dssp             CHHHHHHHHHHTCCBEEEECSCHHH----HT-----TSBCTTC--EECCGG--------GHHHHHHHHSCCTTSCEEEEC
T ss_pred             cHHHHHHHHHCCCCeEEEECCCHHH----HH-----hccCCCc--cccccc--------chhhhhhhcccccCceeeecc
Confidence            5567664 44443348999998641    10     0111222  344443        122222223234567999999


Q ss_pred             cCCCChHHHHHHHHHHHcCCC
Q 001898          355 KEGVWRTYAMVSRWRQYMARC  375 (998)
Q Consensus       355 tAGKDRTG~vvaLll~llGVs  375 (998)
                      ..|. |+..++.++.. +|..
T Consensus        66 ~~g~-~s~~~~~~l~~-~G~~   84 (101)
T d1yt8a2          66 DGEG-LAPVAAQRLHD-LGYS   84 (101)
T ss_dssp             SSSS-HHHHHHHHHHH-TTCS
T ss_pred             chhh-hHHHHHHHHHH-cCCC
Confidence            9998 88877666644 5654


No 39 
>d1vlja_ e.22.1.2 (A:) NADH-dependent butanol dehydrogenase A (TM0820) {Thermotoga maritima [TaxId: 2336]}
Probab=74.23  E-value=1.5  Score=46.38  Aligned_cols=96  Identities=18%  Similarity=0.181  Sum_probs=56.6

Q ss_pred             CCEEEEEecCCh-hHHHHHHHHHHHHhcCCCeEEEEcCChhhHhhcCCCCccceeeeccCccc-ccCCccEEEEEcCCch
Q 001898          690 PRTVLVLKKPGP-ALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSD-LHERVDFVACLGGDGV  767 (998)
Q Consensus       690 pk~VlIv~K~~~-~~~~~a~~l~~~L~~~~gi~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~d-l~~~~DlVIvLGGDGT  767 (998)
                      .++|+||.-.+. .......++...|.+ .++++.+-.++.    ..+....+...    .+. ...++|+||.+|| |+
T Consensus        34 ~~rvliVt~~~~~~~~g~~~~l~~~L~~-~gi~~~~f~~v~----~~pt~~~v~~~----~~~~~~~~~D~IIavGG-Gs  103 (398)
T d1vlja_          34 IRKVLFLYGGGSIKKNGVYDQVVDSLKK-HGIEWVEVSGVK----PNPVLSKVHEA----VEVAKKEKVEAVLGVGG-GS  103 (398)
T ss_dssp             CCEEEEEECSSHHHHSSHHHHHHHHHHH-TTCEEEEECCCC----SSCBHHHHHHH----HHHHHHTTCSEEEEEES-HH
T ss_pred             CCeEEEEECCcHHHHhhHHHHHHHHHHh-cCCeEEEEcCcc----CCCCHHHHHHH----hhhcccccCceEEecCC-cc
Confidence            579999987664 223356778888854 577765432211    00100000000    001 1257899999999 99


Q ss_pred             HHHHHHhcc-------------------CCCCcEEEEeC--CCCcccCC
Q 001898          768 ILHASNLFR-------------------GAVPPVISFNL--GSLGFLTS  795 (998)
Q Consensus       768 lL~Aar~~~-------------------~~~~PVLGINl--G~LGFLt~  795 (998)
                      .+-+++.+.                   ...+|++.|.+  |+=+..+.
T Consensus       104 ~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~P~i~iPTt~gtgse~t~  152 (398)
T d1vlja_         104 VVDSAKAVAAGALYEGDIWDAFIGKYQIEKALPIFDVLTISATGTEMNG  152 (398)
T ss_dssp             HHHHHHHHHHHTTCSSCGGGGGGTSCCCCCCCCEEEEECSCSSCGGGSS
T ss_pred             hhhHHHHHHHHhhcccchHHhhcccccccCCCCeeeeecccccceeccc
Confidence            999998764                   34679999985  44444443


No 40 
>d1e0ca2 c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]}
Probab=74.12  E-value=2  Score=38.97  Aligned_cols=94  Identities=7%  Similarity=-0.040  Sum_probs=48.4

Q ss_pred             CCHhhHHHHHhcCCcEEEEcCCCCc--CCCchhHhhHHhhhcCCcEEEEEecCCC-----CCCCHHHHHHHHHHHhcCCC
Q 001898          275 VTEEGLKWLMEKGYKTIVDIRAERV--KDNFYEAAIDDAILSGKVELIKIPVEVR-----TAPTMEQVEKFASLVSNSSK  347 (998)
Q Consensus       275 pT~eDl~~L~elGIKTVIDLRsee~--ee~~~~a~e~~~~e~~GI~yIhIPV~d~-----~~ps~e~v~~flelL~d~~~  347 (998)
                      .+.+++......+=-.|||.|+..+  .+....   ...=...|.  +|+|....     ...+.+++.+.++-+--..+
T Consensus        14 ~s~d~l~~~l~~~~~~liD~R~~~ey~G~~~~~---~~~GhIPGA--inip~~~~~~~~~~~~~~~~l~~~~~~~gi~~~   88 (136)
T d1e0ca2          14 ASRDYLLGRLGAADLAIWDARSPQEYRGEKVLA---AKGGHIPGA--VNFEWTAAMDPSRALRIRTDIAGRLEELGITPD   88 (136)
T ss_dssp             CCHHHHHHHTTCTTEEEEECSCHHHHTTSSCCS---SSCSBCTTC--EECCGGGGEEGGGTTEECTTHHHHHHHTTCCTT
T ss_pred             EcHHHHHHhhCCCCeEEEECcChHHhccccccc---ccCCcchhH--hhhhhhhhhccccccchhHHHhhhhhhcccCCC
Confidence            3666665554443357999998641  000000   000011222  45564321     11123455555544322456


Q ss_pred             CcEEEeCcCCCChHHHHHHHHHHHcCCC
Q 001898          348 KPLYLHSKEGVWRTYAMVSRWRQYMARC  375 (998)
Q Consensus       348 ~PVLVHCtAGKDRTG~vvaLll~llGVs  375 (998)
                      .+|+++|..|. |+..++.++ ..+|.+
T Consensus        89 ~~vV~yC~~G~-~a~~~~~~l-~~~G~~  114 (136)
T d1e0ca2          89 KEIVTHCQTHH-RSGLTYLIA-KALGYP  114 (136)
T ss_dssp             SEEEEECSSSS-HHHHHHHHH-HHTTCS
T ss_pred             CceEEeCCChH-HHHHHHHHH-HHcCCC
Confidence            89999999997 877665544 456765


No 41 
>d1uara2 c.46.1.2 (A:145-285) Sulfurtransferase {Thermus thermophilus [TaxId: 274]}
Probab=69.82  E-value=1.3  Score=40.63  Aligned_cols=55  Identities=11%  Similarity=0.051  Sum_probs=35.2

Q ss_pred             EEEecCCC-----CCCCHHHHHHHHHHHhcCCCCcEEEeCcCCCChHHHHHHHHHHHcCCC
Q 001898          320 IKIPVEVR-----TAPTMEQVEKFASLVSNSSKKPLYLHSKEGVWRTYAMVSRWRQYMARC  375 (998)
Q Consensus       320 IhIPV~d~-----~~ps~e~v~~flelL~d~~~~PVLVHCtAGKDRTG~vvaLll~llGVs  375 (998)
                      +|+|..+.     ...+.+++++++..+--..+.+|+++|.+|. |++..+..+..++|.+
T Consensus        57 ~nlp~~~~~~~~~~~~~~~~~~~~~~~~gi~~d~~vV~yC~~G~-~As~~~~~l~~~~G~~  116 (141)
T d1uara2          57 KNIPWAKAVNPDGTFKSAEELRALYEPLGITKDKDIVVYCRIAE-RSSHSWFVLKYLLGYP  116 (141)
T ss_dssp             EECCGGGGBCTTSCBCCHHHHHHHHGGGTCCTTSEEEEECSSHH-HHHHHHHHHHTTSCCS
T ss_pred             cccccccccccccccccHHHHHHHHHHhCCCCCCeEEEEecCcc-hHHHHHHHHHHHcCCC
Confidence            56675322     2335677777665543245679999999997 7777666555445765


No 42 
>d4pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=67.84  E-value=1.1  Score=46.84  Aligned_cols=52  Identities=21%  Similarity=0.349  Sum_probs=37.8

Q ss_pred             CCccEEEEEcCCchHHHHHHhccCCCCcEEEEeC-------C---CCcccCCCCcccHHHHHHHH
Q 001898          754 ERVDFVACLGGDGVILHASNLFRGAVPPVISFNL-------G---SLGFLTSHPFEDYRQDLRQV  808 (998)
Q Consensus       754 ~~~DlVIvLGGDGTlL~Aar~~~~~~~PVLGINl-------G---~LGFLt~~~~eel~~~L~~i  808 (998)
                      .+.|.+|++|||||+=.|..+ ....+||+||..       |   ++||-|..  +.+.++++++
T Consensus        92 ~~I~~li~iGG~~s~~~a~~L-~~~~~~vvgIPkTIDNDl~~td~t~Gf~TA~--~~~~~~i~~l  153 (319)
T d4pfka_          92 HGIQGLVVIGGDGSYQGAKKL-TEHGFPCVGVPGTIDNDIPGTDFTIGFDTAL--NTVIDAIDKI  153 (319)
T ss_dssp             HTCCEEEEEECHHHHHHHHHH-HHTTCCEEEEEBCSSCCCTTCSSCBTHHHHH--HHHHHHHHHH
T ss_pred             hccceEEEecCchHHHHHHHH-HhccCceeeeeeeccCCcCCccccccHHHHH--HHHHHHHHHH
Confidence            368999999999998776655 456799999964       2   77888763  3444555544


No 43 
>d1o2da_ e.22.1.2 (A:) Alcohol dehydrogenase TM0920 {Thermotoga maritima [TaxId: 2336]}
Probab=67.30  E-value=2.4  Score=44.15  Aligned_cols=97  Identities=19%  Similarity=0.243  Sum_probs=53.5

Q ss_pred             CCEEEEEecCCh-hHHHHHHHHHHHHhcCCCeEEEEcCChhhHhhcCCCCccceeeeccCcccccCCccEEEEEcCCchH
Q 001898          690 PRTVLVLKKPGP-ALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACLGGDGVI  768 (998)
Q Consensus       690 pk~VlIv~K~~~-~~~~~a~~l~~~L~~~~gi~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~DlVIvLGGDGTl  768 (998)
                      .++++||.-... .......++.+.|.+ .++++.+-..+.    ..+....+....   ..-...++|+||.+|| |+.
T Consensus        28 g~k~liV~~~~~~~~~g~~~~v~~~L~~-~~i~~~~f~~v~----~~p~~~~v~~~~---~~~~~~~~D~IIavGG-Gs~   98 (359)
T d1o2da_          28 GKRALVVTGKSSSKKNGSLDDLKKLLDE-TEISYEIFDEVE----ENPSFDNVMKAV---ERYRNDSFDFVVGLGG-GSP   98 (359)
T ss_dssp             CSEEEEEEESSGGGTSSHHHHHHHHHHH-TTCEEEEEEEEC----SSCBHHHHHHHH---HHHTTSCCSEEEEEES-HHH
T ss_pred             CCeEEEEEcCcHHHHhhHHHHHHHHHHH-cCCeEEEEcCcc----CCCCHHHHHHhh---hhccccCCceEEeccc-ccc
Confidence            478888875442 223345677777754 466654321110    001000000000   0001357899999999 999


Q ss_pred             HHHHHhcc-------------------CCCCcEEEEeC--CCCcccCC
Q 001898          769 LHASNLFR-------------------GAVPPVISFNL--GSLGFLTS  795 (998)
Q Consensus       769 L~Aar~~~-------------------~~~~PVLGINl--G~LGFLt~  795 (998)
                      +-+++.+.                   ...+|++.|-+  |+=+..+.
T Consensus        99 iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTt~gtgse~t~  146 (359)
T d1o2da_          99 MDFAKAVAVLLKEKDLSVEDLYDREKVKHWLPVVEIPTTAGTGSEVTP  146 (359)
T ss_dssp             HHHHHHHHHHTTSTTCCSGGGGCGGGCCCCCCEEEEECSSCCCGGGCC
T ss_pred             hhHHHHHHHHHhCCCCchhhccCcccccCCCCeEEeccccccchhccc
Confidence            99998764                   34589999875  54444443


No 44 
>d1t3ka_ c.46.1.1 (A:) Dual specificity phosphatase Cdc25 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=66.88  E-value=1.1  Score=39.95  Aligned_cols=78  Identities=18%  Similarity=0.119  Sum_probs=44.2

Q ss_pred             CCHhhHHHHHhcCCcEEEEcCCCCcCCCchhHhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhcCCCCcEEEeC
Q 001898          275 VTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSNSSKKPLYLHS  354 (998)
Q Consensus       275 pT~eDl~~L~elGIKTVIDLRsee~ee~~~~a~e~~~~e~~GI~yIhIPV~d~~~ps~e~v~~flelL~d~~~~PVLVHC  354 (998)
                      ++++++..+.+.+=-.|||.|++.+    |     +.-...|.  +|+|......    .+.++.+.+  ..+.+++|||
T Consensus        10 I~~~el~~~~~~~~v~iIDvR~~~e----~-----~~ghIpgA--inip~~~~~~----~~~~~~~~~--~~~~~iv~~c   72 (132)
T d1t3ka_          10 ITSTQLLPLHRRPNIAIIDVRDEER----N-----YDGHIAGS--LHYASGSFDD----KISHLVQNV--KDKDTLVFHS   72 (132)
T ss_dssp             ECTTTTTTCCCCTTEEEEEESCSHH----H-----HSSCCCSS--EEECCSSSST----THHHHHHTC--CSCCEEEESS
T ss_pred             ECHHHHHHHHhCCCeEEEEccCHHH----H-----HhccCccc--ceeeeecccc----ccccccccc--ccccceEEEe
Confidence            3555555444444347999998640    1     11112233  5788764322    233444433  3466899999


Q ss_pred             cCCCChHHHHHHHHH
Q 001898          355 KEGVWRTYAMVSRWR  369 (998)
Q Consensus       355 tAGKDRTG~vvaLll  369 (998)
                      ..|..|...++..+.
T Consensus        73 ~~~~~~~~~aa~~l~   87 (132)
T d1t3ka_          73 ALSQVRGPTCARRLV   87 (132)
T ss_dssp             SCCSSSHHHHHHHHH
T ss_pred             ccccccchHHHHHHH
Confidence            999978766655443


No 45 
>d1rrma_ e.22.1.2 (A:) Lactaldehyde reductase FucO {Escherichia coli [TaxId: 562]}
Probab=65.52  E-value=1.8  Score=45.38  Aligned_cols=78  Identities=12%  Similarity=0.098  Sum_probs=43.7

Q ss_pred             CCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhHhhcCCCCccceeeeccCcccccCCccEEEEEcCCchHH
Q 001898          690 PRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACLGGDGVIL  769 (998)
Q Consensus       690 pk~VlIv~K~~~~~~~~a~~l~~~L~~~~gi~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~DlVIvLGGDGTlL  769 (998)
                      .++++||..+.-.......++.+.|.+ .|+++.+-..+.    ..+....+...  . ..-...++|+||.+|| |..+
T Consensus        30 ~k~~Livt~~~~~~~g~~~~v~~~L~~-~gi~~~vf~~v~----~~p~~~~v~~~--~-~~~~~~~~D~IiaiGG-GS~i  100 (385)
T d1rrma_          30 YQKALIVTDKTLVQCGVVAKVTDKMDA-AGLAWAIYDGVV----PNPTITVVKEG--L-GVFQNSGADYLIAIGG-GSPQ  100 (385)
T ss_dssp             CCEEEEECBHHHHHTTHHHHHHHHHHH-TTCEEEEECBCC----SSCBHHHHHHH--H-HHHHHHTCSEEEEEES-HHHH
T ss_pred             CCEEEEEECcchhhCcHHHHHHHHHHH-cCCeEEEEcCcc----CCCCHHHHHHH--h-hhhhccCCCEEEecCC-Cchh
Confidence            489999985432222356788888864 477765422211    00100000000  0 0001247999999999 9999


Q ss_pred             HHHHhcc
Q 001898          770 HASNLFR  776 (998)
Q Consensus       770 ~Aar~~~  776 (998)
                      -+++.+.
T Consensus       101 D~aK~ia  107 (385)
T d1rrma_         101 DTCKAIG  107 (385)
T ss_dssp             HHHHHHH
T ss_pred             hHHHHHH
Confidence            9988654


No 46 
>d1pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Escherichia coli [TaxId: 562]}
Probab=58.58  E-value=2.4  Score=44.00  Aligned_cols=53  Identities=25%  Similarity=0.437  Sum_probs=39.1

Q ss_pred             CCccEEEEEcCCchHHHHHHhccCCCCcEEEEeC-------C---CCcccCCCCcccHHHHHHHHH
Q 001898          754 ERVDFVACLGGDGVILHASNLFRGAVPPVISFNL-------G---SLGFLTSHPFEDYRQDLRQVI  809 (998)
Q Consensus       754 ~~~DlVIvLGGDGTlL~Aar~~~~~~~PVLGINl-------G---~LGFLt~~~~eel~~~L~~il  809 (998)
                      .+.|.+|++|||||+-.|.++ ....+||+||-.       |   ++||-|.++  .+.++++.+.
T Consensus        93 ~~I~~li~iGG~~s~~~a~~l-~~~~~~vigiPkTIDNDl~~td~s~Gf~TA~~--~~~~~i~~l~  155 (320)
T d1pfka_          93 RGIDALVVIGGDGSYMGAMRL-TEMGFPCIGLPGTIDNDIKGTDYTIGFFTALS--TVVEAIDRLR  155 (320)
T ss_dssp             TTCCEEEEEECHHHHHHHHHH-HHTTCCEEEEEBCTTCCCTTCSCCBTHHHHHH--HHHHHHHHHH
T ss_pred             cCCCEEEEeCCchHHHHHHHH-HhcccceeeeeeeecCCCCCcCCCCchHHHHH--HHHHHHHHHh
Confidence            479999999999999877654 556799999954       2   789988743  3555555543


No 47 
>d1i3ca_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Synechocystis sp. PCC 6803, RCP1 [TaxId: 1148]}
Probab=56.08  E-value=38  Score=30.00  Aligned_cols=110  Identities=15%  Similarity=0.165  Sum_probs=59.2

Q ss_pred             cCCCEEEEEecCChhHHHHHHHHHHHHhcC-CCeEEEEcCChhhHhhcCCCCccceeeeccCcccccCCccEEEEE----
Q 001898          688 TTPRTVLVLKKPGPALMEEAKEVASFLYHQ-EKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACL----  762 (998)
Q Consensus       688 ~~pk~VlIv~K~~~~~~~~a~~l~~~L~~~-~gi~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~DlVIvL----  762 (998)
                      .||++||||=- .....+   -+.+.|.+. .+.+|..-.+-.+.+..+..         .........+|+||+=    
T Consensus         1 nppk~ILiVdD-~~~~~~---~l~~~L~~~g~~~~v~~a~~g~~Al~~l~~---------~~~~~~~~~pdlIllD~~mP   67 (144)
T d1i3ca_           1 NPPKVILLVED-SKADSR---LVQEVLKTSTIDHELIILRDGLAAMAFLQQ---------QGEYENSPRPNLILLDLNLP   67 (144)
T ss_dssp             CCCEEEEEECC-CHHHHH---HHHHHHHSCCSCEEEEEECSHHHHHHHHTT---------CGGGTTCCCCSEEEECSCCS
T ss_pred             CCCCEEEEEEC-CHHHHH---HHHHHHHHcCCCeEEEEECCHHHHHHHHHh---------chhhhccCCCCEEEEECccc
Confidence            37899999832 222222   244445432 23466654544333321111         0001112357888753    


Q ss_pred             cCCc-hHHHHHHhccC-CCCcEEEEeC-------------CCCcccCC-CCcccHHHHHHHHHc
Q 001898          763 GGDG-VILHASNLFRG-AVPPVISFNL-------------GSLGFLTS-HPFEDYRQDLRQVIY  810 (998)
Q Consensus       763 GGDG-TlL~Aar~~~~-~~~PVLGINl-------------G~LGFLt~-~~~eel~~~L~~il~  810 (998)
                      |.|| .+++..|.... ..+||+=+..             |--+||+- ++.+++.+.++++..
T Consensus        68 ~~~G~el~~~ir~~~~~~~iPvi~lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~l~~  131 (144)
T d1i3ca_          68 KKDGREVLAEIKQNPDLKRIPVVVLTTSHNEDDVIASYELHVNCYLTKSRNLKDLFKMVQGIES  131 (144)
T ss_dssp             SSCHHHHHHHHHHCTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHH
T ss_pred             cccchHHHHHHHhCcccCCCeEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
Confidence            7777 45555665432 4689986543             56678774 788888887777653


No 48 
>d1qo0d_ c.23.1.3 (D:) Positive regulator of the amidase operon AmiR {Pseudomonas aeruginosa [TaxId: 287]}
Probab=55.24  E-value=33  Score=31.06  Aligned_cols=57  Identities=12%  Similarity=-0.061  Sum_probs=38.9

Q ss_pred             CCccEEEE---EcCCchHHHHHHhccCCCCcEEEEeC-------------CCCcccC-CCCcccHHHHHHHHHc
Q 001898          754 ERVDFVAC---LGGDGVILHASNLFRGAVPPVISFNL-------------GSLGFLT-SHPFEDYRQDLRQVIY  810 (998)
Q Consensus       754 ~~~DlVIv---LGGDGTlL~Aar~~~~~~~PVLGINl-------------G~LGFLt-~~~~eel~~~L~~il~  810 (998)
                      ..+|+||+   ..|+|.++.+...-....+||+-+..             |-.|||+ +++++++...|..++.
T Consensus        50 ~~~Dlvl~D~~mp~~~~~~~~~~~~~~p~~pvI~lta~~~~~~~~~al~~Ga~~yL~KP~~~~~L~~~i~~~~~  123 (189)
T d1qo0d_          50 VPVDVVFTSIFQNRHHDEIAALLAAGTPRTTLVALVEYESPAVLSQIIELECHGVITQPLDAHRVLPVLVSARR  123 (189)
T ss_dssp             SCCSEEEEECCSSTHHHHHHHHHHHSCTTCEEEEEECCCSHHHHHHHHHHTCSEEEESSCCGGGHHHHHHHHHH
T ss_pred             CCCCEEEEcCCCCCcHHHHHHHHHHcCCCCCEEEEeccchHHHHHHHHHcCCcEEEEecchhhHHHHHHhhccc
Confidence            45788776   34555555544444556789998754             6678887 5888888888876553


No 49 
>d1s1ma1 c.23.16.1 (A:287-544) CTP synthase PyrG, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=55.20  E-value=5.4  Score=40.45  Aligned_cols=37  Identities=22%  Similarity=0.398  Sum_probs=31.9

Q ss_pred             ccCCccEEEEEcCCch-----HHHHHHhccCCCCcEEEEeCC
Q 001898          752 LHERVDFVACLGGDGV-----ILHASNLFRGAVPPVISFNLG  788 (998)
Q Consensus       752 l~~~~DlVIvLGGDGT-----lL~Aar~~~~~~~PVLGINlG  788 (998)
                      ...++|-|++-||=|+     .+.|+++....++|.|||-+|
T Consensus        54 ~L~~~dGIlvPGGFG~RG~eGki~ai~yARen~iPfLGIClG   95 (258)
T d1s1ma1          54 ILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLG   95 (258)
T ss_dssp             TTTTCSEEEECCCCSSTTHHHHHHHHHHHHHTTCCEEEETHH
T ss_pred             cccccccEEeecccCcCCHHHHHHHHHHHHHcCccHHHHHHH
Confidence            3467999999999775     688899888889999999877


No 50 
>d2f48a1 c.89.1.1 (A:4-553) Pyrophosphate-dependent phosphofructokinase {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]}
Probab=53.37  E-value=2.6  Score=47.05  Aligned_cols=53  Identities=23%  Similarity=0.328  Sum_probs=37.4

Q ss_pred             CCccEEEEEcCCchHHHHHHhcc-----CCCCcEEEEeC-------C-----CCcccCCCCcccHHHHHHHH
Q 001898          754 ERVDFVACLGGDGVILHASNLFR-----GAVPPVISFNL-------G-----SLGFLTSHPFEDYRQDLRQV  808 (998)
Q Consensus       754 ~~~DlVIvLGGDGTlL~Aar~~~-----~~~~PVLGINl-------G-----~LGFLt~~~~eel~~~L~~i  808 (998)
                      .+.|.+|++|||||+-.|+.+..     +..+||+||-.       |     ++||-|...  .+.+.+..+
T Consensus       162 ~~Id~LviIGGd~S~~~a~~Lae~~~~~~~~i~vigvPKTIDNDl~~~~~d~s~GfdTA~~--~~~~~i~~l  231 (550)
T d2f48a1         162 NNLNAIIIIGGDDSNTNAAILAEYFKKNGENIQVIGVPKTIDADLRNDHIEISFGFDSATK--IYSELIGNL  231 (550)
T ss_dssp             TTCSEEEEEESHHHHHHHHHHHHHHHHTTCCCEEEEEEEETTCCCCCSSCCCCEEHHHHHH--HHHHHHHHH
T ss_pred             cCCCEEEEECChHHHHHHHHHHHHHHHhCCCccEEEecccccCCCCCccccccccHHHHHH--HHHHHHHHH
Confidence            47899999999999999887642     35799999943       3     567776532  333444444


No 51 
>d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=51.83  E-value=27  Score=29.84  Aligned_cols=96  Identities=9%  Similarity=0.225  Sum_probs=55.0

Q ss_pred             CEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhHhhcCCCCccceeeeccCcccccCCccEEEE----EcCCc
Q 001898          691 RTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVAC----LGGDG  766 (998)
Q Consensus       691 k~VlIv~K~~~~~~~~a~~l~~~L~~~~gi~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~DlVIv----LGGDG  766 (998)
                      |+||||=-. +.   ....+..+|.+ .|++|..-.+..+.+....                ...+|+||+    =|.||
T Consensus         1 KrILiVdDd-~~---~~~~l~~~L~~-~g~~v~~a~~~~eal~~~~----------------~~~~dlillD~~mp~~~G   59 (117)
T d2a9pa1           1 KKILIVDDE-KP---ISDIIKFNMTK-EGYEVVTAFNGREALEQFE----------------AEQPDIIILDLMLPEIDG   59 (117)
T ss_dssp             CEEEEECSC-HH---HHHHHHHHHHH-TTCEEEEESSHHHHHHHHH----------------HHCCSEEEECSSCSSSCH
T ss_pred             CEEEEEECC-HH---HHHHHHHHHHH-CCCEEEEECCHHHHHHHHH----------------hcCCCEEEeccccCCCCc
Confidence            577777421 22   23345555544 5888887666555432110                134677775    36677


Q ss_pred             -hHHHHHHhccCCCCcEEEEeC-------------CCCcccC-CCCcccHHHHHHHHH
Q 001898          767 -VILHASNLFRGAVPPVISFNL-------------GSLGFLT-SHPFEDYRQDLRQVI  809 (998)
Q Consensus       767 -TlL~Aar~~~~~~~PVLGINl-------------G~LGFLt-~~~~eel~~~L~~il  809 (998)
                       .+++..+.  ...+||+-+..             |--+||+ +|+++++...++.++
T Consensus        60 ~~~~~~i~~--~~~~pvI~lt~~~~~~~~~~a~~~Ga~d~l~KP~~~~~L~~~i~~~l  115 (117)
T d2a9pa1          60 LEVAKTIRK--TSSVPILMLSAKDSEFDKVIGLELGADDYVTKPFSNRELQARVKALL  115 (117)
T ss_dssp             HHHHHHHHT--TCCCCEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHH
T ss_pred             cHHHHHHHh--CCCCCEEEEecCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHh
Confidence             34444443  34689987643             5566766 567777777776665


No 52 
>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}
Probab=48.82  E-value=12  Score=36.87  Aligned_cols=60  Identities=22%  Similarity=0.254  Sum_probs=43.7

Q ss_pred             CcccccCCccEEEEEcCCchHHHHHHhccCCCCcEEEEeCC-------------CCcccC---CCCcccHHHHHHHHHcc
Q 001898          748 DTSDLHERVDFVACLGGDGVILHASNLFRGAVPPVISFNLG-------------SLGFLT---SHPFEDYRQDLRQVIYG  811 (998)
Q Consensus       748 ~~~dl~~~~DlVIvLGGDGTlL~Aar~~~~~~~PVLGINlG-------------~LGFLt---~~~~eel~~~L~~il~G  811 (998)
                      +..++...+|++|+-||-||++-|+..    ++|++++-..             -+|-..   .++++++.++|+++++.
T Consensus       295 p~~~ll~~~~~~I~hgG~~t~~Eal~~----GvP~l~~P~~~DQ~~na~~v~~~G~g~~l~~~~~~~~~L~~ai~~vl~~  370 (401)
T d1rrva_         295 NFQALFRRVAAVIHHGSAGTEHVATRA----GVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTTVLAP  370 (401)
T ss_dssp             CHHHHGGGSSEEEECCCHHHHHHHHHH----TCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHHHHHHHHHHTSH
T ss_pred             CcHHHhhhccEEEecCCchHHHHHHHh----CCCEEEecccccHHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHhCH
Confidence            334566789999999999999998754    6899988542             134333   24678888899888753


No 53 
>d1vcoa1 c.23.16.1 (A:298-547) CTP synthase PyrG, C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=47.39  E-value=6.8  Score=39.48  Aligned_cols=38  Identities=24%  Similarity=0.287  Sum_probs=32.3

Q ss_pred             cccCCccEEEEEcCCc-----hHHHHHHhccCCCCcEEEEeCC
Q 001898          751 DLHERVDFVACLGGDG-----VILHASNLFRGAVPPVISFNLG  788 (998)
Q Consensus       751 dl~~~~DlVIvLGGDG-----TlL~Aar~~~~~~~PVLGINlG  788 (998)
                      +...++|-|++-||=|     ..+.|+++....++|.|||-+|
T Consensus        54 ~~L~~~dGIlvPGGFG~rG~eGki~ai~yARen~iPfLGIClG   96 (250)
T d1vcoa1          54 EAFRDVSGILVPGGFGVRGIEGKVRAAQYARERKIPYLGICLG   96 (250)
T ss_dssp             HHTTTCSCEEECCCCSSTTHHHHHHHHHHHHHTTCCEEEETHH
T ss_pred             HHHhcCCeEEecCCCCccchHHHHHHHHHHHHcchhHHHHHHH
Confidence            4457889999999977     4688899988889999999887


No 54 
>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]}
Probab=47.06  E-value=38  Score=28.87  Aligned_cols=99  Identities=11%  Similarity=0.226  Sum_probs=54.0

Q ss_pred             CCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhHhhcCCCCccceeeeccCcccccCCccEEEE----EcCC
Q 001898          690 PRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVAC----LGGD  765 (998)
Q Consensus       690 pk~VlIv~K~~~~~~~~a~~l~~~L~~~~gi~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~DlVIv----LGGD  765 (998)
                      .++||||=  +++.  ....+..+|.+ .|.+|..-.+..+.+....                ...+|+||+    =|.|
T Consensus         2 ~krILiVD--Dd~~--~~~~l~~~L~~-~g~~v~~a~~~~~al~~l~----------------~~~~dlillD~~mp~~~   60 (121)
T d1mvoa_           2 NKKILVVD--DEES--IVTLLQYNLER-SGYDVITASDGEEALKKAE----------------TEKPDLIVLDVMLPKLD   60 (121)
T ss_dssp             CCEEEEEC--SCHH--HHHHHHHHHHH-TTCEEEEESSHHHHHHHHH----------------HHCCSEEEEESSCSSSC
T ss_pred             CCCEEEEE--CCHH--HHHHHHHHHHH-CCCEEEEECCHHHHHHHHh----------------cccccEEEecccccCCC
Confidence            36888873  1222  23335555643 5888887666555432110                124677664    2667


Q ss_pred             chHH-HHHHhccCCCCcEEEEeC-------------CCCcccC-CCCcccHHHHHHHHHc
Q 001898          766 GVIL-HASNLFRGAVPPVISFNL-------------GSLGFLT-SHPFEDYRQDLRQVIY  810 (998)
Q Consensus       766 GTlL-~Aar~~~~~~~PVLGINl-------------G~LGFLt-~~~~eel~~~L~~il~  810 (998)
                      |.-+ ...+. ....+||+-+-.             |--+||. +|+++++...++.+++
T Consensus        61 G~~~~~~~r~-~~~~~~ii~lt~~~~~~~~~~~~~~Ga~~yl~KP~~~~~L~~~i~~~lr  119 (121)
T d1mvoa_          61 GIEVCKQLRQ-QKLMFPILMLTAKDEEFDKVLGLELGADDYMTKPFSPREVNARVKAILR  119 (121)
T ss_dssp             HHHHHHHHHH-TTCCCCEEEEECTTCCCCHHHHHHTTCCEEEESSCCHHHHHHHHHHHHH
T ss_pred             Cchhhhhhhc-cCCCCEEEEEEeeCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHc
Confidence            7544 33333 334567765432             5556665 5677777777766653


No 55 
>d1nvma2 c.1.10.5 (A:2-290) 4-hydroxy-2-oxovalerate aldolase DmpG, catalytic domain {Pseudomonas sp. [TaxId: 306]}
Probab=43.30  E-value=37  Score=33.00  Aligned_cols=97  Identities=9%  Similarity=-0.042  Sum_probs=61.7

Q ss_pred             HhhHHHHHhcCCcEEEEcCCCCcCCCchhHhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhcC--CCCcEEEeC
Q 001898          277 EEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSNS--SKKPLYLHS  354 (998)
Q Consensus       277 ~eDl~~L~elGIKTVIDLRsee~ee~~~~a~e~~~~e~~GI~yIhIPV~d~~~ps~e~v~~flelL~d~--~~~PVLVHC  354 (998)
                      .+.++..+++|+++++.+-........+.....+.+...|+..+.++=. ....+++++.++++.+.+.  .+-|+-+||
T Consensus       122 ~~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~I~l~DT-~G~~~P~~v~~~v~~l~~~~~~~~~i~~H~  200 (289)
T d1nvma2         122 KQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCIYMADS-GGAMSMNDIRDRMRAFKAVLKPETQVGMHA  200 (289)
T ss_dssp             HHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSEEEEECT-TCCCCHHHHHHHHHHHHHHSCTTSEEEEEC
T ss_pred             hHHHHHHHHhCCceeeEeeeccccCchhhhHHHHhhccccceeeeecch-hhcccchhHHHHHHHHHHHhcccccceeee
Confidence            4557778888999999987664212112223345567778999888755 4556788888888877542  345788899


Q ss_pred             cCCCChHHHHHHHHHHHcCCC
Q 001898          355 KEGVWRTYAMVSRWRQYMARC  375 (998)
Q Consensus       355 tAGKDRTG~vvaLll~llGVs  375 (998)
                      +--.+. +++-++.....|++
T Consensus       201 Hn~~g~-a~an~l~A~~~G~~  220 (289)
T d1nvma2         201 HHNLSL-GVANSIVAVEEGCD  220 (289)
T ss_dssp             BCTTSC-HHHHHHHHHHTTCC
T ss_pred             chHHHH-HHHHHHHHHHhCCc
Confidence            876643 33323333334665


No 56 
>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}
Probab=40.43  E-value=30  Score=29.67  Aligned_cols=95  Identities=12%  Similarity=0.143  Sum_probs=50.5

Q ss_pred             CEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEc-CChhhHhhcCCCCccceeeeccCcccccCCccEEEE----EcCC
Q 001898          691 RTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVE-PDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVAC----LGGD  765 (998)
Q Consensus       691 k~VlIv~K~~~~~~~~a~~l~~~L~~~~gi~V~ve-~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~DlVIv----LGGD  765 (998)
                      ++|+||=.  ++  .....+..+|.+ .|++|..+ .+..+.+....                ...+|+||+    -|.|
T Consensus         2 krILivDD--~~--~~~~~l~~~L~~-~g~~v~~~a~~~~~al~~~~----------------~~~~dliilD~~mp~~~   60 (118)
T d1u0sy_           2 KRVLIVDD--AA--FMRMMLKDIITK-AGYEVAGEATNGREAVEKYK----------------ELKPDIVTMDITMPEMN   60 (118)
T ss_dssp             CEEEEECS--CH--HHHHHHHHHHHH-TTCEEEEEESSHHHHHHHHH----------------HHCCSEEEEECSCGGGC
T ss_pred             CEEEEEeC--CH--HHHHHHHHHHHH-cCCceEEEECCHHHHHHHHH----------------hccCCEEEEecCCCCCC
Confidence            57787722  12  223335555643 58887633 44444332110                124566664    3678


Q ss_pred             c-hHHHHHHhccCCCCcEEEEeC-------------CCCcccC-CCCcccHHHHHHH
Q 001898          766 G-VILHASNLFRGAVPPVISFNL-------------GSLGFLT-SHPFEDYRQDLRQ  807 (998)
Q Consensus       766 G-TlL~Aar~~~~~~~PVLGINl-------------G~LGFLt-~~~~eel~~~L~~  807 (998)
                      | .+++..+... ..+||+-+..             |-.+||+ +++++++.+.|++
T Consensus        61 G~e~~~~ir~~~-~~~pvi~ls~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~l~~  116 (118)
T d1u0sy_          61 GIDAIKEIMKID-PNAKIIVCSAMGQQAMVIEAIKAGAKDFIVKPFQPSRVVEALNK  116 (118)
T ss_dssp             HHHHHHHHHHHC-TTCCEEEEECTTCHHHHHHHHHTTCCEEEESSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhC-CCCcEEEEEccCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHH
Confidence            8 6777776654 4688876532             4455555 4555555555544


No 57 
>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}
Probab=38.88  E-value=6.8  Score=38.47  Aligned_cols=59  Identities=22%  Similarity=0.233  Sum_probs=43.4

Q ss_pred             cccccCCccEEEEEcCCchHHHHHHhccCCCCcEEEEeCC-------------CCccc---CCCCcccHHHHHHHHHcc
Q 001898          749 TSDLHERVDFVACLGGDGVILHASNLFRGAVPPVISFNLG-------------SLGFL---TSHPFEDYRQDLRQVIYG  811 (998)
Q Consensus       749 ~~dl~~~~DlVIvLGGDGTlL~Aar~~~~~~~PVLGINlG-------------~LGFL---t~~~~eel~~~L~~il~G  811 (998)
                      ..++..++|++|+-||-||+..++..    ++|++.+-..             -.|-.   ..++++++.++|.++++.
T Consensus       295 ~~~~l~~~~~~V~hgG~~t~~Eal~~----GvP~v~~P~~~DQ~~na~~l~~~G~g~~l~~~~~~~~~l~~ai~~~l~~  369 (401)
T d1iira_         295 HQVLFGRVAAVIHHGGAGTTHVAARA----GAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATALTP  369 (401)
T ss_dssp             HHHHGGGSSEEEECCCHHHHHHHHHH----TCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHHTSH
T ss_pred             HHHHHhhcCEEEecCCchHHHHHHHh----CCCEEEccccccHHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHhCH
Confidence            34556779999999999999998754    6899987431             13432   235688899999988854


No 58 
>d1w25a1 c.23.1.1 (A:2-140) Response regulator PleD, receiver domain {Caulobacter crescentus [TaxId: 155892]}
Probab=37.41  E-value=54  Score=28.68  Aligned_cols=98  Identities=18%  Similarity=0.123  Sum_probs=59.0

Q ss_pred             EEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhHhhcCCCCccceeeeccCcccccCCccEEEEE----cCCch
Q 001898          692 TVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACL----GGDGV  767 (998)
Q Consensus       692 ~VlIv~K~~~~~~~~a~~l~~~L~~~~gi~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~DlVIvL----GGDGT  767 (998)
                      +||||=-. +..   .+.+..+|.+ .|++|....+..+.+....                ...+|+|++=    |.||.
T Consensus         3 rILiVDD~-~~~---~~~l~~~L~~-~g~~v~~a~~~~eal~~~~----------------~~~~dlil~D~~~p~~~G~   61 (139)
T d1w25a1           3 RILVVDDI-EAN---VRLLEAKLTA-EYYEVSTAMDGPTALAMAA----------------RDLPDIILLDVMMPGMDGF   61 (139)
T ss_dssp             EEEEECSS-TTH---HHHHHHHHHH-TTCEEEEESSHHHHHHHHH----------------HHCCSEEEEESCCSSSCHH
T ss_pred             EEEEEECC-HHH---HHHHHHHHHH-CCCEEEEEccchhhhhhhh----------------cccceeeeeeccccCCCch
Confidence            67777221 122   2334555543 5888887766555432110                1347888775    78887


Q ss_pred             -HHHHHHhcc-CCCCcEEEEeC-------------CCCcccC-CCCcccHHHHHHHHHc
Q 001898          768 -ILHASNLFR-GAVPPVISFNL-------------GSLGFLT-SHPFEDYRQDLRQVIY  810 (998)
Q Consensus       768 -lL~Aar~~~-~~~~PVLGINl-------------G~LGFLt-~~~~eel~~~L~~il~  810 (998)
                       ++...+... ...+||+-+..             |--+||+ +++++++...++.+++
T Consensus        62 ~~~~~ir~~~~~~~~piI~lt~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~lr  120 (139)
T d1w25a1          62 TVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESGASDFLTKPIDDVMLFARVRSLTR  120 (139)
T ss_dssp             HHHHHHHHSTTTTTSCEEEEECSSCHHHHHHHHHHTCCEEEESSCCHHHHHHHHHHHHH
T ss_pred             HHHHHhhhcccccCCCEEEEEcCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHH
Confidence             666666543 35789987643             6677776 5777777766666553


No 59 
>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}
Probab=37.27  E-value=44  Score=32.38  Aligned_cols=60  Identities=17%  Similarity=0.145  Sum_probs=44.3

Q ss_pred             cccccCCccEEEEEcCCchHHHHHHhccCCCCcEEEEeCC-----------------CCcccC---CCCcccHHHHHHHH
Q 001898          749 TSDLHERVDFVACLGGDGVILHASNLFRGAVPPVISFNLG-----------------SLGFLT---SHPFEDYRQDLRQV  808 (998)
Q Consensus       749 ~~dl~~~~DlVIvLGGDGTlL~Aar~~~~~~~PVLGINlG-----------------~LGFLt---~~~~eel~~~L~~i  808 (998)
                      ..++...+|++|+-||=||++-+...    ++|++.+-..                 -+|...   .++++++.++|+++
T Consensus       280 ~~~ll~~a~~~v~hgG~~t~~Eal~~----G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l~~~~~~~~~l~~~i~~~  355 (391)
T d1pn3a_         280 LQELFGRVAAAIHHDSAGTTLLAMRA----GIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDGPVPTIDSLSAALDTA  355 (391)
T ss_dssp             HHHHHTTSSCEEEESCHHHHHHHHHH----TCCEEEECSSCCBTTBCCHHHHHHHHHTSEEEECCSSCCHHHHHHHHHHH
T ss_pred             HHHHHhhccEEEecCchHHHHHHHHh----CCcEEEeccccCCcchHHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHH
Confidence            34566789999999999999988754    6899988542                 134333   35678899999998


Q ss_pred             HccC
Q 001898          809 IYGN  812 (998)
Q Consensus       809 l~G~  812 (998)
                      ++.+
T Consensus       356 l~~~  359 (391)
T d1pn3a_         356 LAPE  359 (391)
T ss_dssp             TSTT
T ss_pred             hCHH
Confidence            8643


No 60 
>d1zesa1 c.23.1.1 (A:3-123) PhoB receiver domain {Escherichia coli [TaxId: 562]}
Probab=36.51  E-value=67  Score=27.28  Aligned_cols=98  Identities=15%  Similarity=0.239  Sum_probs=56.4

Q ss_pred             CEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhHhhcCCCCccceeeeccCcccccCCccEEEE----EcCCc
Q 001898          691 RTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVAC----LGGDG  766 (998)
Q Consensus       691 k~VlIv~K~~~~~~~~a~~l~~~L~~~~gi~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~DlVIv----LGGDG  766 (998)
                      |+|+||=-. +   .....+..+|.+ .|++|....+..+.+....                ...+|+||+    =|.||
T Consensus         1 KkILiVDD~-~---~~~~~l~~~L~~-~g~~v~~a~~~~~al~~l~----------------~~~~dlil~D~~mp~~~G   59 (121)
T d1zesa1           1 RRILVVEDE-A---PIREMVCFVLEQ-NGFQPVEAEDYDSAVNQLN----------------EPWPDLILLDWMLPGGSG   59 (121)
T ss_dssp             CEEEEECSC-H---HHHHHHHHHHHH-TTCEEEEECSHHHHHHHSS----------------SSCCSEEEECSSCTTSCH
T ss_pred             CEEEEEeCC-H---HHHHHHHHHHHH-CCCEEEEECChHHHHHHHH----------------ccCCCEEEeecCCCCCCH
Confidence            567776421 1   223335555543 5888887766655543221                124677764    24555


Q ss_pred             -hHHHHHHhcc-CCCCcEEEEeC-------------CCCcccC-CCCcccHHHHHHHHH
Q 001898          767 -VILHASNLFR-GAVPPVISFNL-------------GSLGFLT-SHPFEDYRQDLRQVI  809 (998)
Q Consensus       767 -TlL~Aar~~~-~~~~PVLGINl-------------G~LGFLt-~~~~eel~~~L~~il  809 (998)
                       .+++..+... ...+||+-+..             |--+||+ +++++++...++.++
T Consensus        60 ~~l~~~lr~~~~~~~~pvi~lt~~~~~~~~~~~~~~G~~d~l~KP~~~~~L~~~v~~~l  118 (121)
T d1zesa1          60 IQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVM  118 (121)
T ss_dssp             HHHHHHHHHSTTTTTSCEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCccCCCCeEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH
Confidence             3555555432 35689987642             5667776 477777777777665


No 61 
>d1kq3a_ e.22.1.2 (A:) Glycerol dehydrogenase {Thermotoga maritima [TaxId: 2336]}
Probab=36.42  E-value=9.7  Score=38.99  Aligned_cols=42  Identities=21%  Similarity=0.299  Sum_probs=32.1

Q ss_pred             cCCccEEEEEcCCchHHHHHHhcc-CCCCcEEEEeC--CCCcccCC
Q 001898          753 HERVDFVACLGGDGVILHASNLFR-GAVPPVISFNL--GSLGFLTS  795 (998)
Q Consensus       753 ~~~~DlVIvLGGDGTlL~Aar~~~-~~~~PVLGINl--G~LGFLt~  795 (998)
                      ..++|+||.+|| |+.+-+++.+. ...+|++.|.+  |+=+..+.
T Consensus        81 ~~~~D~IIavGG-Gs~~D~aK~ia~~~~~P~I~IPTTa~tgse~t~  125 (364)
T d1kq3a_          81 EEETDVVVGIGG-GKTLDTAKAVAYKLKKPVVIVPTIASTDAPCSA  125 (364)
T ss_dssp             CTTCCEEEEEES-HHHHHHHHHHHHHTTCCEEEEESSCCCSCTTSS
T ss_pred             hccCcEEEEecc-Cccceeeccccccccccceeecccccccccccc
Confidence            357899999999 99999999765 36789999975  44334433


No 62 
>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]}
Probab=35.05  E-value=13  Score=37.40  Aligned_cols=56  Identities=14%  Similarity=0.184  Sum_probs=42.9

Q ss_pred             ccCCccEEEEEcCCchHHHHHHhccCCCCcEEEEeCC------------C--CcccCC---------CCcccHHHHHHHH
Q 001898          752 LHERVDFVACLGGDGVILHASNLFRGAVPPVISFNLG------------S--LGFLTS---------HPFEDYRQDLRQV  808 (998)
Q Consensus       752 l~~~~DlVIvLGGDGTlL~Aar~~~~~~~PVLGINlG------------~--LGFLt~---------~~~eel~~~L~~i  808 (998)
                      ...++|++|+=||-||+..|+.    .++|.+++-..            .  +|.-..         ++.+++.++|.++
T Consensus       345 ~~p~~~~fItHGG~gs~~eAl~----~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~~~~~~~~~~~t~~~l~~a~~~v  420 (461)
T d2acva1         345 AHKAIGGFVSHCGWNSILESMW----FGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDL  420 (461)
T ss_dssp             HSTTEEEEEECCCHHHHHHHHH----TTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHH
T ss_pred             hcccCCEEEecCCccHHHHHHH----cCCCEEeCCcccchHHHHHHHHHHhCceEEeeccccccCCccCHHHHHHHHHHH
Confidence            3578999999999999999985    36899986542            2  343322         5678999999999


Q ss_pred             Hcc
Q 001898          809 IYG  811 (998)
Q Consensus       809 l~G  811 (998)
                      +.+
T Consensus       421 l~~  423 (461)
T d2acva1         421 MDK  423 (461)
T ss_dssp             TCT
T ss_pred             hhC
Confidence            954


No 63 
>d1oj7a_ e.22.1.2 (A:) Hypothetical oxidoreductase yqhD {Escherichia coli [TaxId: 562]}
Probab=32.76  E-value=21  Score=37.07  Aligned_cols=76  Identities=18%  Similarity=0.272  Sum_probs=42.0

Q ss_pred             CCCEEEEEecCCh-hHHHHHHHHHHHHhcCCCeEEEEcCChhhHhhcCCCCccceeeeccCcccccCCccEEEEEcCCch
Q 001898          689 TPRTVLVLKKPGP-ALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACLGGDGV  767 (998)
Q Consensus       689 ~pk~VlIv~K~~~-~~~~~a~~l~~~L~~~~gi~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~DlVIvLGGDGT  767 (998)
                      .-++++||.-.+. .......++...|.   ++++.+-.++..    .+....+...   -..-...++|+||.+|| |+
T Consensus        31 ~~~~vliV~~~~~~~~~g~~~~v~~~L~---~~~~~~f~~v~~----~p~~~~v~~~---~~~~~~~~~D~IIavGG-Gs   99 (390)
T d1oj7a_          31 HDARVLITYGGGSVKKTGVLDQVLDALK---GMDVLEFGGIEP----NPAYETLMNA---VKLVREQKVTFLLAVGG-GS   99 (390)
T ss_dssp             TTCEEEEEECSSHHHHHSHHHHHHHHTT---TSEEEEECCCCS----SCBHHHHHHH---HHHHHHHTCCEEEEEES-HH
T ss_pred             CCCCEEEEECCchHHHccHHHHHHHHcC---CCcEEEEeCccC----CCCHHHHHHH---HHHHhhcCCCEEEecCC-Cc
Confidence            3578999877664 33445667777773   555554333210    0100000000   00001247899999999 99


Q ss_pred             HHHHHHhc
Q 001898          768 ILHASNLF  775 (998)
Q Consensus       768 lL~Aar~~  775 (998)
                      .+-+++.+
T Consensus       100 ~iD~aK~i  107 (390)
T d1oj7a_         100 VLDGTKFI  107 (390)
T ss_dssp             HHHHHHHH
T ss_pred             cccHHHHH
Confidence            99998743


No 64 
>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}
Probab=32.75  E-value=50  Score=28.15  Aligned_cols=97  Identities=16%  Similarity=0.282  Sum_probs=55.9

Q ss_pred             CEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhHhhcCCCCccceeeeccCcccccCCccEEEE----EcCCc
Q 001898          691 RTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVAC----LGGDG  766 (998)
Q Consensus       691 k~VlIv~K~~~~~~~~a~~l~~~L~~~~gi~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~DlVIv----LGGDG  766 (998)
                      |+|+||=- .+.....   +...|.+ .|++|....+..+.+....                ...+|+||+    =|.||
T Consensus         2 krILvVDD-~~~~~~~---l~~~L~~-~g~~v~~a~~g~eal~~~~----------------~~~~dlillD~~mP~~~G   60 (119)
T d1peya_           2 EKILIVDD-QSGIRIL---LNEVFNK-EGYQTFQAANGLQALDIVT----------------KERPDLVLLDMKIPGMDG   60 (119)
T ss_dssp             CEEEEECS-CHHHHHH---HHHHHHH-TTCEEEEESSHHHHHHHHH----------------HHCCSEEEEESCCTTCCH
T ss_pred             CEEEEEeC-CHHHHHH---HHHHHHH-cCCEEEEeCCHHHHHHHHH----------------hCCCCEEEEeccCCCCCH
Confidence            57887722 1222223   3444433 5888887666544332110                124576664    37888


Q ss_pred             -hHHHHHHhccCCCCcEEEEeC-------------CCCcccC-CCCcccHHHHHHHHH
Q 001898          767 -VILHASNLFRGAVPPVISFNL-------------GSLGFLT-SHPFEDYRQDLRQVI  809 (998)
Q Consensus       767 -TlL~Aar~~~~~~~PVLGINl-------------G~LGFLt-~~~~eel~~~L~~il  809 (998)
                       .+++..|... ..+||+-+..             |-.+||+ +++++++.+.+++++
T Consensus        61 ~el~~~lr~~~-~~~pvi~lt~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~v~~~L  117 (119)
T d1peya_          61 IEILKRMKVID-ENIRVIIMTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYL  117 (119)
T ss_dssp             HHHHHHHHHHC-TTCEEEEEESSCCHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHhC-CCCcEEEEecCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHC
Confidence             6777777644 4688876642             5566776 577777777776654


No 65 
>d1yioa2 c.23.1.1 (A:3-130) Response regulatory protein StyR, N-terminal domain {Pseudomonas fluorescens [TaxId: 294]}
Probab=32.20  E-value=1.1e+02  Score=26.08  Aligned_cols=97  Identities=12%  Similarity=0.153  Sum_probs=53.1

Q ss_pred             EEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhHhhcCCCCccceeeeccCcccccCCccEEEE----EcCCch
Q 001898          692 TVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVAC----LGGDGV  767 (998)
Q Consensus       692 ~VlIv~K~~~~~~~~a~~l~~~L~~~~gi~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~DlVIv----LGGDGT  767 (998)
                      +||||=  +++  ...+.+..+|. +.|+.|....+..+.+....                ...+|+||+    =|+||.
T Consensus         4 ~ILiVD--Dd~--~~~~~l~~~L~-~~g~~v~~a~~~~~al~~~~----------------~~~~dliilD~~mp~~~G~   62 (128)
T d1yioa2           4 TVFVVD--DDM--SVREGLRNLLR-SAGFEVETFDCASTFLEHRR----------------PEQHGCLVLDMRMPGMSGI   62 (128)
T ss_dssp             EEEEEC--SCH--HHHHHHHHHHH-TTTCEEEEESSHHHHHHHCC----------------TTSCEEEEEESCCSSSCHH
T ss_pred             EEEEEE--CCH--HHHHHHHHHHH-HcCCCccccccHHHHHHHHH----------------hcCCCEeehhhhcccchhH
Confidence            777773  122  22344555554 45888887666555443221                134566664    356665


Q ss_pred             H-HHHHHhccCCCCcEEEE-------------eCCCCcccC-CCCcccHHHHHHHHHc
Q 001898          768 I-LHASNLFRGAVPPVISF-------------NLGSLGFLT-SHPFEDYRQDLRQVIY  810 (998)
Q Consensus       768 l-L~Aar~~~~~~~PVLGI-------------NlG~LGFLt-~~~~eel~~~L~~il~  810 (998)
                      - +...+.. ...+||+=+             +.|-.+||+ +++++++...++++++
T Consensus        63 ~~~~~i~~~-~~~~~ii~lt~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~l~  119 (128)
T d1yioa2          63 ELQEQLTAI-SDGIPIVFITAHGDIPMTVRAMKAGAIEFLPKPFEEQALLDAIEQGLQ  119 (128)
T ss_dssp             HHHHHHHHT-TCCCCEEEEESCTTSCCCHHHHHTTEEEEEESSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHhh-CCCCeEEEEEEECCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
Confidence            3 3333332 344566433             225566776 5788888887777664


No 66 
>d1o1ya_ c.23.16.1 (A:) Hypothetical protein TM1158 {Thermotoga maritima [TaxId: 2336]}
Probab=31.75  E-value=11  Score=36.73  Aligned_cols=35  Identities=26%  Similarity=0.270  Sum_probs=23.0

Q ss_pred             CCccEEEEEcCCch--------HHHH----HHhccCCCCcEEEEeCC
Q 001898          754 ERVDFVACLGGDGV--------ILHA----SNLFRGAVPPVISFNLG  788 (998)
Q Consensus       754 ~~~DlVIvLGGDGT--------lL~A----ar~~~~~~~PVLGINlG  788 (998)
                      +++|.+|+.||-+.        .+..    .+.+...++|||||-+|
T Consensus        47 ~~~d~iii~Ggp~~~~d~~~~~~~~~~~~~i~~~~~~~~PilGIC~G   93 (230)
T d1o1ya_          47 EEYSLVVLLGGYMGAYEEEKYPFLKYEFQLIEEILKKEIPFLGICLG   93 (230)
T ss_dssp             GGCSEEEECCCSCCTTCTTTCTHHHHHHHHHHHHHHHTCCEEEETHH
T ss_pred             hhCCEEEEcCCCcccccchhhhhhHHHHHHHHHHHHhcceEEEeecC
Confidence            46899999998322        2222    22223457999999888


No 67 
>d1zgza1 c.23.1.1 (A:2-121) TorCAD operon transcriptional regulator TorD, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=30.23  E-value=1.1e+02  Score=25.58  Aligned_cols=97  Identities=11%  Similarity=0.257  Sum_probs=50.9

Q ss_pred             CCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhHhhcCCCCccceeeeccCcccccCCccEEEE----EcCC
Q 001898          690 PRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVAC----LGGD  765 (998)
Q Consensus       690 pk~VlIv~K~~~~~~~~a~~l~~~L~~~~gi~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~DlVIv----LGGD  765 (998)
                      |.+|+||=--  +  .....+..+|.+ .|.+|....+..+.+....                ...+|+||+    =|+|
T Consensus         1 P~rILiVDDd--~--~~~~~l~~~L~~-~g~~v~~a~~~~~a~~~~~----------------~~~~dliilD~~mp~~~   59 (120)
T d1zgza1           1 PHHIVIVEDE--P--VTQARLQSYFTQ-EGYTVSVTASGAGLREIMQ----------------NQSVDLILLDINLPDEN   59 (120)
T ss_dssp             CCEEEEECSS--H--HHHHHHHHHHHH-TTCEEEEESSHHHHHHHHH----------------HSCCSEEEEESCCSSSC
T ss_pred             CCEEEEEeCC--H--HHHHHHHHHHHH-CCCEEEEECCHHHHHHHHH----------------hcCCCEEeeehhhccch
Confidence            4677777322  1  223445566643 5788887666554332110                123455553    2455


Q ss_pred             chH-HHHHHhccCCCCcEEEEeC-------------CCCcccC-CCCcccHHHHHHHHH
Q 001898          766 GVI-LHASNLFRGAVPPVISFNL-------------GSLGFLT-SHPFEDYRQDLRQVI  809 (998)
Q Consensus       766 GTl-L~Aar~~~~~~~PVLGINl-------------G~LGFLt-~~~~eel~~~L~~il  809 (998)
                      |.- ++..+  ....+||+-+..             |--+||+ +++++++...+++++
T Consensus        60 g~~~~~~~~--~~~~~piI~lt~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~l  116 (120)
T d1zgza1          60 GLMLTRALR--ERSTVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLL  116 (120)
T ss_dssp             HHHHHHHHH--TTCCCEEEEEESSCCHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHH
T ss_pred             hHHHHHHHh--ccCCCeEEEEEccCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH
Confidence            543 22322  234678876643             5566666 466666666666554


No 68 
>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=29.62  E-value=91  Score=26.52  Aligned_cols=97  Identities=15%  Similarity=0.207  Sum_probs=58.1

Q ss_pred             EEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhHhhcCCCCccceeeeccCcccccCCccEEEE----EcCCch
Q 001898          692 TVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVAC----LGGDGV  767 (998)
Q Consensus       692 ~VlIv~K~~~~~~~~a~~l~~~L~~~~gi~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~DlVIv----LGGDGT  767 (998)
                      +||||=--  +  .....+..+|.+ .|++|..-.+..+.+....                ...+|+||+    =|+||.
T Consensus         3 kILiVDD~--~--~~~~~l~~~L~~-~g~~v~~a~~~~eal~~~~----------------~~~~dlvl~D~~mP~~~G~   61 (121)
T d1ys7a2           3 RVLVVDDD--S--DVLASLERGLRL-SGFEVATAVDGAEALRSAT----------------ENRPDAIVLDINMPVLDGV   61 (121)
T ss_dssp             EEEEECSC--H--HHHHHHHHHHHH-TTCEEEEESSHHHHHHHHH----------------HSCCSEEEEESSCSSSCHH
T ss_pred             EEEEEECC--H--HHHHHHHHHHHH-CCCEEEEECCHHHHHHHHH----------------hCCCCEEEEEeeccCcccH
Confidence            57776421  1  223445566653 5888887666554432110                134677776    366774


Q ss_pred             -HHHHHHhccCCCCcEEEEeC-------------CCCcccC-CCCcccHHHHHHHHHc
Q 001898          768 -ILHASNLFRGAVPPVISFNL-------------GSLGFLT-SHPFEDYRQDLRQVIY  810 (998)
Q Consensus       768 -lL~Aar~~~~~~~PVLGINl-------------G~LGFLt-~~~~eel~~~L~~il~  810 (998)
                       +++..|.. ...+||+-+..             |--+||+ +|+++++...++++++
T Consensus        62 el~~~ir~~-~~~~piI~lt~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~l~  118 (121)
T d1ys7a2          62 SVVTALRAM-DNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLR  118 (121)
T ss_dssp             HHHHHHHHT-TCCCCEEEEECCCTTTCCCTTTTTTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHhc-CCCCEEEEEEeeCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
Confidence             44555553 35689876642             5566877 5888888888887764


No 69 
>d1uara1 c.46.1.2 (A:2-144) Sulfurtransferase {Thermus thermophilus [TaxId: 274]}
Probab=29.42  E-value=38  Score=30.19  Aligned_cols=45  Identities=13%  Similarity=0.059  Sum_probs=27.0

Q ss_pred             CCCHHHHHHHHHHHhcCCCCcEEEeCcCCCChHHHHHHHHHHHcCC
Q 001898          329 APTMEQVEKFASLVSNSSKKPLYLHSKEGVWRTYAMVSRWRQYMAR  374 (998)
Q Consensus       329 ~ps~e~v~~flelL~d~~~~PVLVHCtAGKDRTG~vvaLll~llGV  374 (998)
                      .++.+.+.+.+.-+--..+.+|+++|..|. +....++..+..+|.
T Consensus        60 l~~~~~l~~~~~~~Gi~~~~~iVvy~~~~~-~~a~~~~~~l~~~G~  104 (143)
T d1uara1          60 FISEEEFAKLMERLGISNDTTVVLYGDKNN-WWAAYAFWFFKYNGH  104 (143)
T ss_dssp             BCCHHHHHHHHHHTTCCTTCEEEEECHHHH-HHHHHHHHHHHHTTC
T ss_pred             chhhHHHHHHhhhhccCCCceEEEecCCCc-ccchhHHHHHHHhCC
Confidence            456777777776553245679999998776 333333333333454


No 70 
>d1xhfa1 c.23.1.1 (A:2-122) Aerobic respiration control protein ArcA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=29.39  E-value=48  Score=28.37  Aligned_cols=96  Identities=11%  Similarity=0.222  Sum_probs=55.8

Q ss_pred             EEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhHhhcCCCCccceeeeccCcccccCCccEEEE----EcCCc-
Q 001898          692 TVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVAC----LGGDG-  766 (998)
Q Consensus       692 ~VlIv~K~~~~~~~~a~~l~~~L~~~~gi~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~DlVIv----LGGDG-  766 (998)
                      +||||=--    ......+..+|.+ .|++|....+..+.+....                ...+|+||+    -|.|| 
T Consensus         4 ~ILiVDDd----~~~~~~l~~~L~~-~g~~v~~a~~~~~al~~l~----------------~~~~dlii~D~~mp~~~G~   62 (121)
T d1xhfa1           4 HILIVEDE----LVTRNTLKSIFEA-EGYDVFEATDGAEMHQILS----------------EYDINLVIMDINLPGKNGL   62 (121)
T ss_dssp             EEEEECSC----HHHHHHHHHHHHT-TTCEEEEESSHHHHHHHHH----------------HSCCSEEEECSSCSSSCHH
T ss_pred             EEEEEECC----HHHHHHHHHHHHH-CCCEEEEECChHHHHHHHH----------------hcCCCEEEeecccCCccCc
Confidence            77777322    2234556777754 6899887666554432110                124566654    35555 


Q ss_pred             hHHHHHHhccCCCCcEEEEeC-------------CCCcccC-CCCcccHHHHHHHHHc
Q 001898          767 VILHASNLFRGAVPPVISFNL-------------GSLGFLT-SHPFEDYRQDLRQVIY  810 (998)
Q Consensus       767 TlL~Aar~~~~~~~PVLGINl-------------G~LGFLt-~~~~eel~~~L~~il~  810 (998)
                      .+++..+.  ...+||+-+..             |--+||+ +|+++++...++++++
T Consensus        63 ~~~~~~r~--~~~~pii~lt~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~v~~~l~  118 (121)
T d1xhfa1          63 LLARELRE--QANVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLS  118 (121)
T ss_dssp             HHHHHHHH--HCCCEEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHh--cCCCcEEEEECCCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHh
Confidence            33343333  34689987743             5667777 4788888777777653


No 71 
>d1k68a_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Calothrix sp. pcc 7601, RcpA [TaxId: 1188]}
Probab=28.07  E-value=1.4e+02  Score=25.85  Aligned_cols=56  Identities=18%  Similarity=0.167  Sum_probs=37.3

Q ss_pred             CCccEEEE----EcCCc-hHHHHHHhccC-CCCcEEEEeC-------------CCCcccC-CCCcccHHHHHHHHH
Q 001898          754 ERVDFVAC----LGGDG-VILHASNLFRG-AVPPVISFNL-------------GSLGFLT-SHPFEDYRQDLRQVI  809 (998)
Q Consensus       754 ~~~DlVIv----LGGDG-TlL~Aar~~~~-~~~PVLGINl-------------G~LGFLt-~~~~eel~~~L~~il  809 (998)
                      ..+|+||+    =|.|| .+++..|.... ..+||+-+..             |--+||+ +++.+++.+.++.+.
T Consensus        54 ~~pdlillD~~mP~~dG~el~~~ir~~~~~~~iPvI~ls~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~i~  129 (140)
T d1k68a_          54 SRPDLILLDLNLPKKDGREVLAEIKSDPTLKRIPVVVLSTSINEDDIFHSYDLHVNCYITKSANLSQLFQIVKGIE  129 (140)
T ss_dssp             CCCSEEEECSSCSSSCHHHHHHHHHHSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHH
T ss_pred             CCCCEEEEeeccccccChHHHHHHHhCcccCCCcEEEEeCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH
Confidence            35788876    36777 56666665432 3689987753             5567776 477788777777664


No 72 
>d1jq5a_ e.22.1.2 (A:) Glycerol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=26.06  E-value=14  Score=37.91  Aligned_cols=33  Identities=15%  Similarity=0.222  Sum_probs=28.3

Q ss_pred             CCccEEEEEcCCchHHHHHHhccC-CCCcEEEEeC
Q 001898          754 ERVDFVACLGGDGVILHASNLFRG-AVPPVISFNL  787 (998)
Q Consensus       754 ~~~DlVIvLGGDGTlL~Aar~~~~-~~~PVLGINl  787 (998)
                      .++|+||.+|| |+.+-+++.+.. ..+|++.|.+
T Consensus        84 ~~~D~IiavGG-Gs~iD~aK~iA~~~~~p~i~IPT  117 (366)
T d1jq5a_          84 AEAAIVIGVGG-GKTLDTAKAVADELDAYIVIVPT  117 (366)
T ss_dssp             TTCSEEEEEES-HHHHHHHHHHHHHHTCEEEEEES
T ss_pred             cCCcEEEEecC-Cccccchheeeecccceeeehhh
Confidence            47899999999 999999997753 4789999975


No 73 
>d1okga2 c.46.1.2 (A:163-301) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]}
Probab=25.61  E-value=31  Score=30.68  Aligned_cols=43  Identities=9%  Similarity=0.095  Sum_probs=27.0

Q ss_pred             CHHHHHHHHHH-Hh----cCCCCcEEEeCcCCCChHHHHHHHHHHHcCCC
Q 001898          331 TMEQVEKFASL-VS----NSSKKPLYLHSKEGVWRTYAMVSRWRQYMARC  375 (998)
Q Consensus       331 s~e~v~~flel-L~----d~~~~PVLVHCtAGKDRTG~vvaLll~llGVs  375 (998)
                      +.+.+.+.+.. +.    .....||.++|..|. |+..++.++ ..+|.+
T Consensus        63 ~~~~l~~~~~~~~~~~~~~~~~~~vV~yC~sG~-~Aa~~~~~L-~~~G~~  110 (139)
T d1okga2          63 SEEEIRHNIMTVVQGAGDAADLSSFVFSCGSGV-TACINIALV-HHLGLG  110 (139)
T ss_dssp             CHHHHHHHHHTTCC-----CCCTTSEEECSSSS-THHHHHHHH-HHTTSC
T ss_pred             CHHHhhhhhhhhhhhccCCCCCCeEEEECCCcH-HHHHHHHHH-HHhCCC
Confidence            45555554432 11    123569999999997 888776555 446764


No 74 
>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]}
Probab=25.16  E-value=29  Score=34.72  Aligned_cols=56  Identities=14%  Similarity=0.021  Sum_probs=42.9

Q ss_pred             cCCccEEEEEcCCchHHHHHHhccCCCCcEEEEeCC------------CCcc-----cCCCCcccHHHHHHHHHccC
Q 001898          753 HERVDFVACLGGDGVILHASNLFRGAVPPVISFNLG------------SLGF-----LTSHPFEDYRQDLRQVIYGN  812 (998)
Q Consensus       753 ~~~~DlVIvLGGDGTlL~Aar~~~~~~~PVLGINlG------------~LGF-----Lt~~~~eel~~~L~~il~G~  812 (998)
                      ..+++++|+=||=||+..|++.    ++|++++-..            .+|.     ...++.+++.++|.++++.+
T Consensus       335 hp~~~~fItHGG~~s~~eal~~----GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~t~~~l~~ai~~vL~d~  407 (450)
T d2c1xa1         335 HEAVGAFVTHCGWNSLWESVAG----GVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQE  407 (450)
T ss_dssp             STTEEEEEECCCHHHHHHHHHH----TCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHHHSH
T ss_pred             cCceeEEEccCCccHHHHHHHc----CCCEEecccccchHHHHHHHHHHcCcEEEecCCCcCHHHHHHHHHHHhcCc
Confidence            3678999999999999999864    6899988653            1333     12356788999999998764


No 75 
>d1p80a1 c.23.16.3 (A:598-753) Catalase, C-terminal domain {Escherichia coli, HPII [TaxId: 562]}
Probab=25.16  E-value=71  Score=28.40  Aligned_cols=100  Identities=10%  Similarity=-0.025  Sum_probs=52.8

Q ss_pred             CCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEE-EcCChhhHhhcCCCCccceeeeccCccc-ccCCccEEEEEcCCch
Q 001898          690 PRTVLVLKKPGPALMEEAKEVASFLYHQEKMNIL-VEPDVHDIFARIPGFGFVQTFYLQDTSD-LHERVDFVACLGGDGV  767 (998)
Q Consensus       690 pk~VlIv~K~~~~~~~~a~~l~~~L~~~~gi~V~-ve~~~~~~~~~~~~~~~~~~~~~~~~~d-l~~~~DlVIvLGGDGT  767 (998)
                      .|+|+|+.-.+-+..+. ..+.+.|.+ .|++|. +.++.... ....+.. +.  ......+ ....+|.||+-||.++
T Consensus         3 grkVaiLv~dg~~~~e~-~~~~~~l~~-ag~~v~~v~~~~~~v-~~~~G~~-i~--~d~t~~~~~~~~yDaliiPGG~~~   76 (156)
T d1p80a1           3 GRVVAILLNDEVRSADL-LAILKALKA-KGVHAKLLYSRMGEV-TADDGTV-LP--IAATFAGAPSLTVDAVIVPCGNIA   76 (156)
T ss_dssp             TCEEEEECCTTCCHHHH-HHHHHHHHH-HTCEEEEEESSSSEE-ECTTSCE-EE--CCEETTTSCGGGCSEEEECCSCTH
T ss_pred             CcEEEEEeCCCCCHHHH-HHHHHHHHH-CCCEEEEEecccccc-cccceeE-Ee--eeeeeccCCcccCCEEEeeCCchH
Confidence            47999998777544433 234444543 355543 33332211 1111110 00  0011111 1246899999998766


Q ss_pred             -------HHHHHHhccCCCCcEEEEeCC-----CCcccCC
Q 001898          768 -------ILHASNLFRGAVPPVISFNLG-----SLGFLTS  795 (998)
Q Consensus       768 -------lL~Aar~~~~~~~PVLGINlG-----~LGFLt~  795 (998)
                             +++..+.+....+||..|-.|     +.|.|..
T Consensus        77 ~l~~~~~~~~~i~e~~~~~K~I~aic~g~~~La~agl~~~  116 (156)
T d1p80a1          77 DIADNGDANYYLMEAYKHLKPIALAGDARKFKATIKIADQ  116 (156)
T ss_dssp             HHHTCHHHHHHHHHHHHTTCCEEEEGGGGGGGGTTTCCSS
T ss_pred             HHhcchHHHHHHHHHHHcCCeEEEECchHHHHHHcCCCcC
Confidence                   444555555678999998765     4566543


No 76 
>d1mb3a_ c.23.1.1 (A:) Cell division response regulator DivK {Caulobacter crescentus [TaxId: 155892]}
Probab=23.93  E-value=1.1e+02  Score=25.85  Aligned_cols=99  Identities=11%  Similarity=0.156  Sum_probs=56.3

Q ss_pred             CEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhHhhcCCCCccceeeeccCcccccCCccEEEE----EcCCc
Q 001898          691 RTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVAC----LGGDG  766 (998)
Q Consensus       691 k~VlIv~K~~~~~~~~a~~l~~~L~~~~gi~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~DlVIv----LGGDG  766 (998)
                      |+||||=-. +..   ...+..+|. ..|++|..-.+..+.+....                ...+|+||+    =|.||
T Consensus         2 krILiVDD~-~~~---~~~l~~~L~-~~g~~v~~a~~~~~al~~~~----------------~~~~dlil~D~~mp~~dG   60 (123)
T d1mb3a_           2 KKVLIVEDN-ELN---MKLFHDLLE-AQGYETLQTREGLSALSIAR----------------ENKPDLILMDIQLPEISG   60 (123)
T ss_dssp             CEEEEECSC-HHH---HHHHHHHHH-HTTCEEEEESCHHHHHHHHH----------------HHCCSEEEEESBCSSSBH
T ss_pred             ceEEEEECC-HHH---HHHHHHHHH-HCCCEEEEECCHHHHHHHHH----------------hCCCCEEEEEeccCCCcH
Confidence            577777321 122   223444454 35888886666544332110                123566654    35677


Q ss_pred             h-HHHHHHhcc-CCCCcEEEEeC-------------CCCcccC-CCCcccHHHHHHHHHc
Q 001898          767 V-ILHASNLFR-GAVPPVISFNL-------------GSLGFLT-SHPFEDYRQDLRQVIY  810 (998)
Q Consensus       767 T-lL~Aar~~~-~~~~PVLGINl-------------G~LGFLt-~~~~eel~~~L~~il~  810 (998)
                      - +++..|... ...+||+-+..             |--+||+ +++++++.+.+.++++
T Consensus        61 ~el~~~ir~~~~~~~iPii~lt~~~~~~~~~~~~~~G~~~~l~KP~~~~~L~~~i~~~l~  120 (123)
T d1mb3a_          61 LEVTKWLKEDDDLAHIPVVAVTAFAMKGDEERIREGGCEAYISKPISVVHFLETIKRLLE  120 (123)
T ss_dssp             HHHHHHHHHSTTTTTSCEEEEC------CHHHHHHHTCSEEECSSCCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHhCCCcCCCCeEEEEEecCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHh
Confidence            3 555565443 25679887642             5567777 4788888888887774


No 77 
>d2fexa1 c.23.16.2 (A:1-188) Hypothetical protein Atu0886 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=22.51  E-value=21  Score=33.40  Aligned_cols=36  Identities=17%  Similarity=0.043  Sum_probs=27.9

Q ss_pred             CCccEEEEEcCCchH-------HHHHHhccCCCCcEEEEeCCC
Q 001898          754 ERVDFVACLGGDGVI-------LHASNLFRGAVPPVISFNLGS  789 (998)
Q Consensus       754 ~~~DlVIvLGGDGTl-------L~Aar~~~~~~~PVLGINlG~  789 (998)
                      .++|++|+.||.|..       +...+.+...+.||.+|..|.
T Consensus        62 ~~~D~liipGG~~~~~~~~~~l~~~lr~~~~~~~~i~aiC~g~  104 (188)
T d2fexa1          62 VDIDALVIPGGLSWEKGTAADLGGLVKRFRDRDRLVAGICAAA  104 (188)
T ss_dssp             TTCSEEEECCBSHHHHTCCCCCHHHHHHHHHTTCEEEEETHHH
T ss_pred             hhccEEEecCCccccccccHHHHHHHHHHHHhCCEEEEecchh
Confidence            568999999998864       444666666788999998775


No 78 
>d1bf6a_ c.1.9.3 (A:) Phosphotriesterase homology protein {Escherichia coli [TaxId: 562]}
Probab=22.16  E-value=1.1e+02  Score=29.47  Aligned_cols=21  Identities=14%  Similarity=0.433  Sum_probs=16.2

Q ss_pred             HhhHHHHHhcCCcEEEEcCCC
Q 001898          277 EEGLKWLMEKGYKTIVDIRAE  297 (998)
Q Consensus       277 ~eDl~~L~elGIKTVIDLRse  297 (998)
                      .+.++.+++.|+++||+....
T Consensus        36 ~~~l~~~~~~Gv~~iV~~t~~   56 (291)
T d1bf6a_          36 CQEMNDLMTRGVRNVIEMTNR   56 (291)
T ss_dssp             HHHHHHHHHTTEEEEEECCCG
T ss_pred             HHHHHHHHHcCCCEEEEcCCC
Confidence            355778888999999987553


No 79 
>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]}
Probab=20.75  E-value=37  Score=33.78  Aligned_cols=55  Identities=15%  Similarity=0.135  Sum_probs=41.9

Q ss_pred             CCccEEEEEcCCchHHHHHHhccCCCCcEEEEeCC------------C--Cccc--CCCCcccHHHHHHHHHccC
Q 001898          754 ERVDFVACLGGDGVILHASNLFRGAVPPVISFNLG------------S--LGFL--TSHPFEDYRQDLRQVIYGN  812 (998)
Q Consensus       754 ~~~DlVIvLGGDGTlL~Aar~~~~~~~PVLGINlG------------~--LGFL--t~~~~eel~~~L~~il~G~  812 (998)
                      .+++++|+=||=||+..|++.    ++|.+++-+.            .  +|--  ..++.+++.++|.+++.+.
T Consensus       363 p~~~~fItHGG~~s~~Eal~~----GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l~~~~t~~~l~~ai~~vl~d~  433 (473)
T d2pq6a1         363 PSIGGFLTHCGWNSTTESICA----GVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNVKREELAKLINEVIAGD  433 (473)
T ss_dssp             TTEEEEEECCCHHHHHHHHHH----TCCEEECCCSTTHHHHHHHHHHTSCCEEECCSSCCHHHHHHHHHHHHTSH
T ss_pred             CcCcEEEecCCccHHHHHHHc----CCCEEeccchhhhHHHHHHHHHHcCeEEeeCCCcCHHHHHHHHHHHHcCC
Confidence            689999999999999999864    5788887542            1  2222  2467888999999998763


No 80 
>d1dcfa_ c.23.1.2 (A:) Receiver domain of the ethylene receptor {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=20.29  E-value=2.4e+02  Score=23.95  Aligned_cols=102  Identities=15%  Similarity=0.149  Sum_probs=59.9

Q ss_pred             CCCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhHhhcCCCCccceeeeccCcccccCCccEEEEE----cC
Q 001898          689 TPRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACL----GG  764 (998)
Q Consensus       689 ~pk~VlIv~K~~~~~~~~a~~l~~~L~~~~gi~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~DlVIvL----GG  764 (998)
                      ...+||||=- .+.....   +.++|. +.|++|....+-.+.+...                 ...+|+||+=    |.
T Consensus         6 ~g~rILvVDD-~~~~~~~---l~~~L~-~~G~~v~~a~~g~eal~~l-----------------~~~~dlillD~~mP~~   63 (134)
T d1dcfa_           6 TGLKVLVMDE-NGVSRMV---TKGLLV-HLGCEVTTVSSNEECLRVV-----------------SHEHKVVFMDVCMPGV   63 (134)
T ss_dssp             TTCEEEEECS-CHHHHHH---HHHHHH-HTTCEEEEESSHHHHHHHC-----------------CTTCSEEEEECCSSTT
T ss_pred             CCCEEEEEeC-CHHHHHH---HHHHHH-HCCCEEEEECCHHHHHHHh-----------------hcCCCeEEEEeccCCC
Confidence            3578988832 2222233   333343 3478887766655544211                 1246776631    77


Q ss_pred             Cch-HHHHHHhc----cCCCCcEEEEe-------------CCCCcccC-CCCcccHHHHHHHHHccC
Q 001898          765 DGV-ILHASNLF----RGAVPPVISFN-------------LGSLGFLT-SHPFEDYRQDLRQVIYGN  812 (998)
Q Consensus       765 DGT-lL~Aar~~----~~~~~PVLGIN-------------lG~LGFLt-~~~~eel~~~L~~il~G~  812 (998)
                      ||. +++..|..    ....+||+.+.             .|--+||+ +++.+++.+.|.++++.+
T Consensus        64 dG~el~~~ir~~~~~~~~~~~~ii~lT~~~~~~~~~~~~~~G~~~~l~KP~~~~~L~~~l~~~l~~r  130 (134)
T d1dcfa_          64 ENYQIALRIHEKFTKQRHQRPLLVALSGNTDKSTKEKCMSFGLDGVLLKPVSLDNIRDVLSDLLEPR  130 (134)
T ss_dssp             TTTHHHHHHHHHHC-CCSCCCEEEEEESCCSHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHHSCC
T ss_pred             chHHHHHHHHHhcccccCCCCeEEEEeCCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHhhhh
Confidence            874 55666532    22457888763             25567777 588889999998888655


No 81 
>d1g2ia_ c.23.16.2 (A:) Intracellular protease {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=20.18  E-value=1.1e+02  Score=27.23  Aligned_cols=37  Identities=22%  Similarity=0.232  Sum_probs=29.1

Q ss_pred             CCccEEEEEcCCch--------HHHHHHhccCCCCcEEEEeCCCC
Q 001898          754 ERVDFVACLGGDGV--------ILHASNLFRGAVPPVISFNLGSL  790 (998)
Q Consensus       754 ~~~DlVIvLGGDGT--------lL~Aar~~~~~~~PVLGINlG~L  790 (998)
                      .++|+||+-||.|+        ++..++.+...+.||.+|..|.+
T Consensus        60 ~~~d~viipGg~~~~~~~~~~~~~~~l~~~~~~~k~i~aiC~G~~  104 (166)
T d1g2ia_          60 EEFDALVLPGGRAPERVRLNEKAVSIARKMFSEGKPVASICHGPQ  104 (166)
T ss_dssp             GGCSEEEECCBSHHHHHTTCHHHHHHHHHHHHTTCCEEEETTTTH
T ss_pred             ccccEEEEecccchhhhccChHHHHHHHHHHhcCCeeeeccccch
Confidence            46899999999875        34556666667899999999874


No 82 
>d1kgsa2 c.23.1.1 (A:2-123) PhoB receiver domain {Thermotoga maritima [TaxId: 2336]}
Probab=20.16  E-value=1.8e+02  Score=24.29  Aligned_cols=85  Identities=21%  Similarity=0.236  Sum_probs=51.5

Q ss_pred             HHHHHHHhcCCCeEEEEcCChhhHhhcCCCCccceeeeccCcccccCCccEEEE----EcCCc-hHHHHHHhccCCCCcE
Q 001898          708 KEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVAC----LGGDG-VILHASNLFRGAVPPV  782 (998)
Q Consensus       708 ~~l~~~L~~~~gi~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~DlVIv----LGGDG-TlL~Aar~~~~~~~PV  782 (998)
                      ..+.++|.+ .|+.|..-.+..+.+....                ...+|+||+    =|+|| .++...|.. ...+||
T Consensus        15 ~~l~~~L~~-~g~~v~~a~~~~~al~~l~----------------~~~~dlillD~~mp~~~g~~~~~~lr~~-~~~~pi   76 (122)
T d1kgsa2          15 DLITEALKK-EMFTVDVCYDGEEGMYMAL----------------NEPFDVVILDIMLPVHDGWEILKSMRES-GVNTPV   76 (122)
T ss_dssp             HHHHHHHHH-TTCEEEEESSHHHHHHHHH----------------HSCCSEEEEESCCSSSCHHHHHHHHHHT-TCCCCE
T ss_pred             HHHHHHHHH-CCCEEEEEcchHHHHHHHH----------------hhCccccccccccccchhHHHHHHHHhc-CCCCcE
Confidence            345556654 5888887666555332110                134566664    36777 455666543 356788


Q ss_pred             EEEe-------------CCCCcccC-CCCcccHHHHHHHHHc
Q 001898          783 ISFN-------------LGSLGFLT-SHPFEDYRQDLRQVIY  810 (998)
Q Consensus       783 LGIN-------------lG~LGFLt-~~~~eel~~~L~~il~  810 (998)
                      +=+.             +|--+||+ +++++++...++.+++
T Consensus        77 I~lt~~~~~~~~~~~~~~Ga~~yl~KP~~~~~L~~~i~~~l~  118 (122)
T d1kgsa2          77 LMLTALSDVEYRVKGLNMGADDYLPKPFDLRELIARVRALIR  118 (122)
T ss_dssp             EEEESSCHHHHHHHTCCCCCSEEEESSCCHHHHHHHHHHHHH
T ss_pred             EEEcCCCCHHHHHHHHHcCCceeecCCCCHHHHHHHHHHHHH
Confidence            7553             36677777 5788888888877764


Done!