Query 001901
Match_columns 998
No_of_seqs 730 out of 4690
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 03:51:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001901.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001901hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3e7a_A PP-1A, serine/threonine 100.0 9.7E-72 3.3E-76 609.4 29.9 291 648-954 8-298 (299)
2 1fjm_A Protein serine/threonin 100.0 4.5E-68 1.5E-72 590.5 29.9 319 648-992 9-328 (330)
3 3h63_A Serine/threonine-protei 100.0 5.9E-68 2E-72 583.6 30.1 294 645-962 13-312 (315)
4 3icf_A PPT, serine/threonine-p 100.0 3.9E-68 1.3E-72 589.0 28.3 297 644-964 13-328 (335)
5 3ll8_A Serine/threonine-protei 100.0 8.8E-68 3E-72 587.4 30.0 290 648-960 30-330 (357)
6 2ie4_C PP2A-alpha;, serine/thr 100.0 1E-64 3.5E-69 560.5 30.3 287 647-957 9-295 (309)
7 1aui_A Calcineurin, serine/thr 100.0 1.5E-64 5.3E-69 580.2 30.5 290 648-960 43-343 (521)
8 1wao_1 Serine/threonine protei 100.0 4.9E-58 1.7E-62 543.5 31.6 293 646-962 167-465 (477)
9 1zgk_A Kelch-like ECH-associat 100.0 5.4E-38 1.9E-42 349.8 32.4 280 84-442 7-289 (308)
10 2xn4_A Kelch-like protein 2; s 100.0 6.9E-36 2.4E-40 331.2 34.0 263 113-442 15-278 (302)
11 2uvk_A YJHT; unknown function, 100.0 2E-36 6.9E-41 343.6 29.1 280 86-440 4-342 (357)
12 2vpj_A Kelch-like protein 12; 100.0 1.7E-35 5.8E-40 327.7 35.4 264 113-440 14-278 (301)
13 3ii7_A Kelch-like protein 7; p 100.0 1.4E-35 4.8E-40 329.4 34.6 260 113-442 11-274 (306)
14 2xn4_A Kelch-like protein 2; s 100.0 1.2E-34 4.1E-39 321.2 34.0 257 83-418 43-302 (302)
15 3ii7_A Kelch-like protein 7; p 100.0 1.3E-34 4.4E-39 321.6 32.0 256 82-416 36-295 (306)
16 1zgk_A Kelch-like ECH-associat 100.0 2.8E-34 9.7E-39 319.7 32.5 258 82-414 51-308 (308)
17 2z72_A Protein-tyrosine-phosph 100.0 1.6E-36 5.4E-41 342.7 13.5 242 687-944 60-322 (342)
18 4asc_A Kelch repeat and BTB do 100.0 6.3E-35 2.2E-39 325.9 24.5 267 87-423 31-305 (315)
19 2vpj_A Kelch-like protein 12; 100.0 9.5E-34 3.2E-38 313.6 32.6 254 83-415 44-300 (301)
20 4asc_A Kelch repeat and BTB do 100.0 5.2E-34 1.8E-38 318.4 27.6 249 151-442 14-279 (315)
21 2woz_A Kelch repeat and BTB do 100.0 4E-34 1.4E-38 319.8 26.1 267 87-423 42-315 (318)
22 2woz_A Kelch repeat and BTB do 100.0 1.6E-33 5.5E-38 314.9 30.5 250 151-443 25-290 (318)
23 2zwa_A Leucine carboxyl methyl 100.0 8.2E-34 2.8E-38 350.5 29.5 293 86-439 383-693 (695)
24 2uvk_A YJHT; unknown function, 100.0 2E-29 6.8E-34 286.0 24.9 250 84-381 47-351 (357)
25 2dfj_A Diadenosinetetraphospha 100.0 1.4E-30 4.7E-35 285.6 1.0 200 698-914 1-211 (280)
26 2zwa_A Leucine carboxyl methyl 100.0 5.9E-27 2E-31 289.3 27.2 236 171-444 385-639 (695)
27 1k3i_A Galactose oxidase precu 99.9 5.2E-27 1.8E-31 288.5 25.2 275 88-425 182-531 (656)
28 2qjc_A Diadenosine tetraphosph 99.9 1.3E-23 4.5E-28 228.6 6.6 185 685-885 6-205 (262)
29 1k3i_A Galactose oxidase precu 99.9 6E-22 2.1E-26 243.4 21.9 249 151-441 167-498 (656)
30 1g5b_A Serine/threonine protei 99.8 6.6E-20 2.3E-24 194.3 1.3 122 698-830 13-145 (221)
31 3rqz_A Metallophosphoesterase; 99.4 5.7E-13 1.9E-17 143.3 13.3 189 698-951 4-218 (246)
32 1nnw_A Hypothetical protein; s 99.4 6E-12 2E-16 135.4 16.5 199 698-951 2-222 (252)
33 3qfm_A SAPH, putative uncharac 99.3 5.9E-12 2E-16 137.2 13.1 119 698-827 12-139 (270)
34 1su1_A Hypothetical protein YF 98.7 4E-08 1.4E-12 102.6 8.7 69 698-776 26-102 (208)
35 1s3l_A Hypothetical protein MJ 98.6 6.5E-07 2.2E-11 92.0 16.2 65 698-777 26-90 (190)
36 1uf3_A Hypothetical protein TT 98.5 1E-06 3.4E-11 92.2 16.0 72 698-776 6-77 (228)
37 2kkn_A Uncharacterized protein 98.3 3.4E-07 1.2E-11 93.1 5.0 62 698-775 23-86 (178)
38 2a22_A Vacuolar protein sortin 98.3 1.6E-05 5.4E-10 83.2 17.6 119 698-907 26-153 (215)
39 3ck2_A Conserved uncharacteriz 98.3 4.5E-06 1.5E-10 84.4 12.2 58 698-775 7-64 (176)
40 1xm7_A Hypothetical protein AQ 98.2 5.3E-06 1.8E-10 85.3 10.2 69 698-776 2-85 (195)
41 3ib7_A ICC protein; metallopho 98.0 6.6E-05 2.3E-09 83.1 14.7 71 698-774 26-112 (330)
42 1z2w_A Vacuolar protein sortin 97.9 1.3E-05 4.6E-10 82.1 7.8 64 698-776 11-77 (192)
43 2yvt_A Hypothetical protein AQ 97.9 7.3E-06 2.5E-10 87.8 4.7 73 698-777 6-104 (260)
44 3d03_A Phosphohydrolase; glyce 97.2 0.00053 1.8E-08 73.5 7.9 67 699-775 2-84 (274)
45 3rl5_A Metallophosphoesterase 97.1 0.00045 1.5E-08 75.4 5.8 63 698-776 60-124 (296)
46 3mbr_X Glutamine cyclotransfer 97.0 0.12 4E-06 54.6 23.6 185 113-352 30-224 (243)
47 2q8u_A Exonuclease, putative; 96.9 0.00065 2.2E-08 75.8 5.6 77 692-776 12-110 (336)
48 2nxf_A Putative dimetal phosph 96.9 0.00043 1.5E-08 75.8 3.9 72 698-775 6-100 (322)
49 3av0_A DNA double-strand break 96.8 0.0013 4.4E-08 74.9 6.8 72 698-776 21-109 (386)
50 1ii7_A MRE11 nuclease; RAD50, 96.7 0.0014 4.8E-08 73.0 6.3 70 699-775 2-88 (333)
51 3dsm_A Uncharacterized protein 96.7 0.38 1.3E-05 52.6 25.5 183 150-375 64-256 (328)
52 3dsm_A Uncharacterized protein 96.5 0.78 2.7E-05 50.1 26.7 230 149-439 16-252 (328)
53 2xmo_A LMO2642 protein; phosph 96.3 0.0034 1.2E-07 72.7 6.0 72 698-776 40-139 (443)
54 3nol_A Glutamine cyclotransfer 96.2 0.3 1E-05 52.1 19.7 185 113-352 52-245 (262)
55 3q7m_A Lipoprotein YFGL, BAMB; 96.1 2.1 7.3E-05 47.1 32.3 187 151-377 64-265 (376)
56 3q7m_A Lipoprotein YFGL, BAMB; 96.0 1.7 5.9E-05 47.9 26.4 181 149-377 152-344 (376)
57 3nok_A Glutaminyl cyclase; bet 95.8 0.34 1.2E-05 51.7 18.4 182 113-352 64-255 (268)
58 3tho_B Exonuclease, putative; 95.7 0.0051 1.8E-07 69.8 3.8 70 698-775 1-91 (379)
59 4fbk_A DNA repair and telomere 95.7 0.0087 3E-07 69.0 5.5 53 698-756 77-141 (472)
60 3t1i_A Double-strand break rep 95.6 0.01 3.6E-07 68.0 5.7 73 698-776 33-153 (431)
61 4fbw_A DNA repair protein RAD3 95.5 0.013 4.4E-07 67.0 6.0 53 698-756 14-78 (417)
62 1kb0_A Quinohemoprotein alcoho 95.4 0.8 2.7E-05 55.8 21.9 114 151-272 88-208 (677)
63 3mbr_X Glutamine cyclotransfer 95.3 3.4 0.00012 43.4 25.4 208 176-440 22-235 (243)
64 2iwa_A Glutamine cyclotransfer 95.2 3.9 0.00013 43.5 26.0 185 150-373 44-238 (266)
65 3bws_A Protein LP49; two-domai 95.1 2.6 9E-05 46.9 23.8 187 151-376 145-338 (433)
66 2hqs_A Protein TOLB; TOLB, PAL 94.8 2.2 7.5E-05 48.2 22.4 191 150-380 159-352 (415)
67 2ad6_A Methanol dehydrogenase 94.7 1.5 5.1E-05 52.2 21.3 112 151-272 74-194 (571)
68 3nol_A Glutamine cyclotransfer 94.3 5.2 0.00018 42.5 21.9 206 178-440 46-256 (262)
69 2iwa_A Glutamine cyclotransfer 94.1 7.1 0.00024 41.5 23.2 206 178-440 24-237 (266)
70 1l0q_A Surface layer protein; 93.9 3.7 0.00013 44.9 21.2 178 150-378 12-195 (391)
71 2qfp_A Purple acid phosphatase 93.8 0.064 2.2E-06 61.5 6.5 71 699-776 121-198 (424)
72 1gxr_A ESG1, transducin-like e 93.8 5.8 0.0002 41.8 21.8 180 150-376 119-300 (337)
73 1ute_A Protein (II purple acid 93.6 0.059 2E-06 58.3 5.5 21 885-905 203-223 (313)
74 1l0q_A Surface layer protein; 93.4 6.1 0.00021 43.1 21.8 178 150-376 54-237 (391)
75 2ojh_A Uncharacterized protein 93.3 3.3 0.00011 42.6 18.5 190 148-380 20-214 (297)
76 1w6s_A Methanol dehydrogenase 93.3 4 0.00014 48.8 21.2 113 151-272 74-200 (599)
77 1yiq_A Quinohemoprotein alcoho 93.0 12 0.0004 45.5 25.2 114 150-271 80-200 (689)
78 1xzw_A Purple acid phosphatase 92.7 0.11 3.6E-06 59.7 6.1 69 699-776 128-205 (426)
79 2hqs_A Protein TOLB; TOLB, PAL 92.7 4.4 0.00015 45.6 19.7 191 150-381 203-396 (415)
80 3vgz_A Uncharacterized protein 92.5 13 0.00043 39.7 26.1 188 150-378 111-309 (353)
81 3jrp_A Fusion protein of prote 92.5 12 0.00042 40.0 22.4 95 151-264 34-135 (379)
82 3u4y_A Uncharacterized protein 92.5 11 0.00038 39.9 21.8 185 149-375 19-210 (331)
83 3no2_A Uncharacterized protein 92.5 4.9 0.00017 42.7 18.6 154 185-376 5-160 (276)
84 1kv9_A Type II quinohemoprotei 92.5 16 0.00056 44.0 25.4 112 151-271 77-195 (668)
85 3nok_A Glutaminyl cyclase; bet 92.4 4.8 0.00017 42.8 17.8 155 178-375 58-213 (268)
86 3jrp_A Fusion protein of prote 92.3 3.8 0.00013 44.2 17.9 197 151-381 80-297 (379)
87 1p22_A F-BOX/WD-repeat protein 92.1 18 0.0006 40.4 24.0 175 150-375 153-328 (435)
88 4aez_A CDC20, WD repeat-contai 91.9 17 0.00059 40.0 23.6 188 148-381 154-345 (401)
89 3no2_A Uncharacterized protein 91.9 6.6 0.00023 41.6 18.8 181 150-377 15-202 (276)
90 3vl1_A 26S proteasome regulato 91.4 19 0.00066 39.4 23.0 93 151-264 120-213 (420)
91 3bws_A Protein LP49; two-domai 91.3 8.6 0.00029 42.6 19.8 193 151-378 102-298 (433)
92 3vgz_A Uncharacterized protein 90.9 19 0.00063 38.3 23.8 191 149-379 68-269 (353)
93 1flg_A Protein (quinoprotein e 90.7 11 0.00036 44.9 20.6 111 151-271 79-201 (582)
94 4aez_A CDC20, WD repeat-contai 90.3 11 0.00038 41.5 19.4 183 150-377 113-298 (401)
95 1gxr_A ESG1, transducin-like e 90.1 16 0.00054 38.3 19.7 149 185-376 109-259 (337)
96 2ovr_B FBW7, F-BOX/WD repeat p 89.8 29 0.00098 38.7 24.0 180 148-377 217-396 (445)
97 1got_B GT-beta; complex (GTP-b 89.1 27 0.00092 37.5 21.7 179 151-375 78-260 (340)
98 3hfq_A Uncharacterized protein 89.1 19 0.00064 38.6 19.6 96 151-262 19-116 (347)
99 1k8k_C P40, ARP2/3 complex 41 88.9 21 0.00072 38.1 19.9 134 150-302 30-164 (372)
100 4ery_A WD repeat-containing pr 88.8 25 0.00087 36.8 23.5 181 151-376 46-227 (312)
101 3jro_A Fusion protein of prote 88.7 8.5 0.00029 47.0 18.2 95 151-264 32-133 (753)
102 3tgh_A Glideosome-associated p 87.9 0.21 7.2E-06 55.6 2.7 69 698-775 4-86 (342)
103 2ecf_A Dipeptidyl peptidase IV 87.4 12 0.0004 45.2 18.2 104 149-274 63-190 (741)
104 2z3z_A Dipeptidyl aminopeptida 87.3 42 0.0014 39.9 23.0 114 253-379 234-351 (706)
105 3zwl_B Eukaryotic translation 87.3 25 0.00084 37.3 19.0 191 151-377 55-254 (369)
106 1jmx_B Amine dehydrogenase; ox 86.9 15 0.00051 38.9 16.9 53 150-211 21-75 (349)
107 1sq9_A Antiviral protein SKI8; 86.6 33 0.0011 37.1 19.8 102 151-264 92-217 (397)
108 4gqb_B Methylosome protein 50; 86.4 7.2 0.00024 42.7 14.1 190 184-442 138-335 (344)
109 1r5m_A SIR4-interacting protei 86.2 25 0.00084 38.2 18.6 183 148-374 169-363 (425)
110 3ow8_A WD repeat-containing pr 85.8 40 0.0014 35.9 21.9 148 186-376 93-241 (321)
111 2z3z_A Dipeptidyl aminopeptida 85.8 32 0.0011 41.0 20.8 160 200-379 234-398 (706)
112 2ad6_A Methanol dehydrogenase 85.8 62 0.0021 38.0 24.8 82 185-271 247-343 (571)
113 2ojh_A Uncharacterized protein 85.5 18 0.00061 36.8 16.1 197 151-380 63-266 (297)
114 4gga_A P55CDC, cell division c 85.5 30 0.001 38.4 19.1 93 150-264 125-219 (420)
115 3scy_A Hypothetical bacterial 85.5 42 0.0014 36.0 19.8 98 151-264 30-130 (361)
116 4d9s_A UVB-resistance protein 85.5 51 0.0017 36.8 24.6 62 229-299 182-251 (406)
117 3qfk_A Uncharacterized protein 85.3 0.48 1.7E-05 55.9 4.0 67 698-774 20-112 (527)
118 3ow8_A WD repeat-containing pr 85.2 42 0.0014 35.7 23.1 179 150-375 102-282 (321)
119 1hp1_A 5'-nucleotidase; metall 85.0 0.38 1.3E-05 56.6 2.9 70 698-774 9-94 (516)
120 2ovr_B FBW7, F-BOX/WD repeat p 84.4 55 0.0019 36.3 23.2 172 151-375 140-311 (445)
121 3mkq_A Coatomer beta'-subunit; 84.2 36 0.0012 41.1 20.5 178 151-375 36-220 (814)
122 3hfq_A Uncharacterized protein 84.0 31 0.0011 36.7 17.9 101 150-264 63-173 (347)
123 3c5m_A Oligogalacturonate lyas 83.7 51 0.0018 35.4 21.2 114 253-381 167-282 (396)
124 4gga_A P55CDC, cell division c 83.3 46 0.0016 36.8 19.4 96 148-264 167-262 (420)
125 1p22_A F-BOX/WD-repeat protein 83.2 20 0.00069 39.9 16.4 147 183-375 141-288 (435)
126 3pe7_A Oligogalacturonate lyas 83.2 33 0.0011 37.1 17.8 202 150-381 60-282 (388)
127 3mkq_A Coatomer beta'-subunit; 82.4 39 0.0013 40.9 19.7 182 150-376 77-263 (814)
128 2ynn_A Coatomer subunit beta'; 82.3 50 0.0017 34.6 18.4 93 151-264 36-129 (304)
129 3v7d_B Cell division control p 82.0 68 0.0023 35.6 20.5 173 150-370 290-463 (464)
130 1ri6_A Putative isomerase YBHE 81.3 44 0.0015 34.9 17.5 96 150-262 15-114 (343)
131 1pjx_A Dfpase, DIISOPROPYLFLUO 81.0 55 0.0019 33.9 21.6 104 149-262 45-161 (314)
132 2ecf_A Dipeptidyl peptidase IV 80.9 42 0.0014 40.2 19.1 110 255-379 264-375 (741)
133 1k8k_C P40, ARP2/3 complex 41 80.8 48 0.0017 35.2 17.8 152 185-371 20-172 (372)
134 4ery_A WD repeat-containing pr 80.6 58 0.002 33.9 24.5 180 150-374 87-270 (312)
135 3jro_A Fusion protein of prote 80.3 9.9 0.00034 46.5 13.2 196 151-381 78-295 (753)
136 1kb0_A Quinohemoprotein alcoho 80.1 34 0.0012 41.2 17.7 132 180-327 73-210 (677)
137 3c5m_A Oligogalacturonate lyas 79.8 23 0.00079 38.2 14.9 205 148-379 166-391 (396)
138 3v9f_A Two-component system se 79.4 78 0.0027 38.4 21.0 187 150-381 427-620 (781)
139 3g4e_A Regucalcin; six bladed 79.0 66 0.0023 33.6 23.5 187 150-379 35-236 (297)
140 1vyh_C Platelet-activating fac 78.3 86 0.0029 34.5 20.1 92 151-264 131-224 (410)
141 2xdw_A Prolyl endopeptidase; a 77.9 1.2E+02 0.0042 36.1 21.9 200 150-374 151-370 (710)
142 4h2g_A 5'-nucleotidase; dimer, 77.9 1.4 4.8E-05 52.2 4.3 68 697-774 25-117 (546)
143 3fm0_A Protein CIAO1; WDR39,SG 77.8 34 0.0011 36.8 15.4 162 184-381 27-190 (345)
144 3iz6_a 40S ribosomal protein R 77.6 67 0.0023 34.9 18.0 26 343-377 260-285 (380)
145 1ri6_A Putative isomerase YBHE 77.1 74 0.0025 33.1 20.8 95 151-263 61-160 (343)
146 3zwl_B Eukaryotic translation 76.9 77 0.0026 33.2 22.6 103 150-263 96-206 (369)
147 1erj_A Transcriptional repress 76.9 90 0.0031 34.0 19.3 93 150-264 145-239 (393)
148 4a2l_A BT_4663, two-component 76.6 88 0.003 38.1 20.3 188 150-381 427-623 (795)
149 2z1a_A 5'-nucleotidase; metal- 76.4 1.6 5.6E-05 51.7 4.3 68 698-775 30-119 (552)
150 2hes_X YDR267CP; beta-propelle 76.3 83 0.0029 33.3 20.7 163 184-379 118-287 (330)
151 1yfq_A Cell cycle arrest prote 76.1 79 0.0027 33.0 17.8 193 150-376 79-286 (342)
152 1r5m_A SIR4-interacting protei 75.8 91 0.0031 33.5 21.2 180 151-376 131-323 (425)
153 3mmy_A MRNA export factor; mRN 75.5 63 0.0022 34.0 16.6 98 150-272 108-208 (368)
154 4a11_B DNA excision repair pro 75.3 38 0.0013 36.4 15.0 94 150-264 122-219 (408)
155 4g56_B MGC81050 protein; prote 75.3 17 0.00059 39.5 12.1 63 184-264 150-214 (357)
156 2pm9_A Protein WEB1, protein t 75.2 39 0.0013 36.7 15.1 68 185-264 126-198 (416)
157 3vl1_A 26S proteasome regulato 75.0 98 0.0033 33.5 19.8 96 184-302 108-203 (420)
158 4gqb_B Methylosome protein 50; 75.0 81 0.0028 34.0 17.5 95 150-264 149-247 (344)
159 3i2n_A WD repeat-containing pr 74.9 13 0.00043 39.6 10.7 96 150-264 44-149 (357)
160 3dwl_C Actin-related protein 2 74.9 25 0.00084 37.9 13.2 133 151-302 34-168 (377)
161 3iuj_A Prolyl endopeptidase; h 74.2 86 0.0029 37.6 19.0 200 150-379 155-366 (693)
162 2xdw_A Prolyl endopeptidase; a 73.7 1.6E+02 0.0053 35.2 21.7 203 148-380 206-424 (710)
163 1yiq_A Quinohemoprotein alcoho 73.1 1.4E+02 0.0048 35.8 20.5 132 180-327 66-203 (689)
164 2vdu_B TRNA (guanine-N(7)-)-me 73.0 1.2E+02 0.004 33.7 18.8 155 186-377 116-276 (450)
165 3azo_A Aminopeptidase; POP fam 72.9 98 0.0033 36.3 18.9 203 149-381 160-378 (662)
166 3ive_A Nucleotidase; structura 72.9 1.8 6.3E-05 50.6 3.5 66 698-774 7-96 (509)
167 4e54_B DNA damage-binding prot 72.8 13 0.00045 41.6 10.6 96 151-264 143-241 (435)
168 1kv9_A Type II quinohemoprotei 72.5 96 0.0033 37.1 18.8 132 179-327 61-198 (668)
169 2aq5_A Coronin-1A; WD40 repeat 72.3 58 0.002 35.5 15.7 93 186-298 145-238 (402)
170 3ztv_A NAD nucleotidase, NADN; 72.1 2.9 9.9E-05 49.8 5.0 68 697-774 12-105 (579)
171 2vdu_B TRNA (guanine-N(7)-)-me 71.2 1.3E+02 0.0045 33.3 22.8 63 185-264 210-272 (450)
172 2aq5_A Coronin-1A; WD40 repeat 70.0 99 0.0034 33.6 16.9 158 184-374 93-256 (402)
173 1qhu_A Protein (hemopexin); be 69.7 1.6E+02 0.0054 33.6 21.6 48 151-210 168-215 (460)
174 1t71_A Phosphatase, conserved 69.0 2.8 9.6E-05 45.0 3.5 68 697-775 4-75 (281)
175 2bkl_A Prolyl endopeptidase; m 68.8 85 0.0029 37.5 17.2 209 149-380 93-315 (695)
176 2ynn_A Coatomer subunit beta'; 68.6 1.2E+02 0.004 31.6 17.2 92 151-264 78-173 (304)
177 3odt_A Protein DOA1; ubiquitin 68.3 1.1E+02 0.0037 31.2 18.6 91 151-261 40-131 (313)
178 3ei3_B DNA damage-binding prot 68.2 1.3E+02 0.0045 32.1 19.7 97 151-264 97-195 (383)
179 2dg1_A DRP35, lactonase; beta 68.0 1.2E+02 0.0042 31.7 21.8 110 150-271 66-177 (333)
180 3pe7_A Oligogalacturonate lyas 67.0 40 0.0014 36.3 12.8 112 148-271 166-279 (388)
181 2pm9_A Protein WEB1, protein t 66.4 86 0.003 33.8 15.4 67 185-264 178-250 (416)
182 1got_B GT-beta; complex (GTP-b 65.9 1.4E+02 0.0048 31.6 23.9 138 201-374 164-303 (340)
183 2bkl_A Prolyl endopeptidase; m 65.6 1.3E+02 0.0043 36.0 17.9 200 150-378 147-357 (695)
184 3azo_A Aminopeptidase; POP fam 64.9 1.9E+02 0.0064 33.8 19.0 158 201-381 102-283 (662)
185 1w6s_A Methanol dehydrogenase 64.8 94 0.0032 36.8 16.1 132 179-326 57-201 (599)
186 3sfz_A APAF-1, apoptotic pepti 64.7 3E+02 0.01 35.0 22.6 91 151-264 638-733 (1249)
187 1vyh_C Platelet-activating fac 64.5 1.7E+02 0.0058 32.1 20.1 63 185-264 204-266 (410)
188 4d9s_A UVB-resistance protein 64.4 1.8E+02 0.006 32.3 19.6 64 228-300 233-304 (406)
189 1pgu_A Actin interacting prote 64.3 1.3E+02 0.0043 34.5 17.1 113 241-377 175-288 (615)
190 2gop_A Trilobed protease; beta 63.8 1.5E+02 0.005 31.1 18.5 190 148-379 41-258 (347)
191 3c9f_A 5'-nucleotidase; 2',3'- 63.1 3.3 0.00011 49.0 2.9 71 698-775 16-107 (557)
192 1yr2_A Prolyl oligopeptidase; 63.0 1.1E+02 0.0039 36.7 16.9 203 150-378 189-401 (741)
193 2pbi_B Guanine nucleotide-bind 63.0 1.6E+02 0.0056 31.4 19.8 178 151-375 87-274 (354)
194 4aow_A Guanine nucleotide-bind 62.7 1.5E+02 0.005 30.7 19.9 177 151-375 109-289 (340)
195 1itv_A MMP9; adaptive molecula 62.1 1.3E+02 0.0045 29.9 17.8 156 178-374 10-176 (195)
196 1nir_A Nitrite reductase; hemo 61.7 76 0.0026 36.9 14.5 131 149-299 247-389 (543)
197 1rwi_B Serine/threonine-protei 61.7 1.4E+02 0.0046 30.0 20.9 177 150-374 46-224 (270)
198 3gve_A YFKN protein; alpha-bet 61.5 4.7 0.00016 44.5 3.7 44 697-745 11-70 (341)
199 1yr2_A Prolyl oligopeptidase; 61.5 2.6E+02 0.009 33.4 19.8 151 200-380 293-449 (741)
200 1jmx_B Amine dehydrogenase; ox 61.4 1.6E+02 0.0054 30.6 17.0 104 150-265 65-177 (349)
201 3v7d_B Cell division control p 61.3 1.9E+02 0.0067 31.7 25.7 147 185-377 280-426 (464)
202 1pex_A Collagenase-3, MMP-13; 60.3 1.5E+02 0.005 29.9 19.2 155 179-376 28-196 (207)
203 4a11_B DNA excision repair pro 60.3 1.5E+02 0.0052 31.5 15.8 101 149-264 165-277 (408)
204 4g56_B MGC81050 protein; prote 59.9 14 0.00047 40.4 7.1 28 184-211 53-80 (357)
205 2wdc_A SOXB, sulfur oxidation 59.7 4.7 0.00016 47.8 3.4 36 733-774 126-166 (562)
206 1q7f_A NHL, brain tumor CG1071 59.3 1.6E+02 0.0054 30.0 31.0 189 150-378 51-244 (286)
207 3sfz_A APAF-1, apoptotic pepti 59.3 2.4E+02 0.0081 35.9 19.8 93 150-264 679-775 (1249)
208 3e5z_A Putative gluconolactona 58.3 1.7E+02 0.0058 30.0 20.3 187 150-379 50-253 (296)
209 3jyf_A 2',3'-cyclic nucleotide 58.2 6.4 0.00022 43.4 4.0 43 697-744 8-66 (339)
210 3hxj_A Pyrrolo-quinoline quino 58.2 1.8E+02 0.006 30.2 17.2 169 150-376 117-289 (330)
211 1sq9_A Antiviral protein SKI8; 57.3 2E+02 0.0068 30.6 20.0 63 186-263 82-157 (397)
212 3dwl_C Actin-related protein 2 56.7 1E+02 0.0035 32.8 13.6 96 151-262 78-176 (377)
213 3scy_A Hypothetical bacterial 56.5 2E+02 0.0069 30.4 19.9 52 151-210 78-129 (361)
214 1qks_A Cytochrome CD1 nitrite 56.5 1.6E+02 0.0053 34.6 15.9 251 148-442 264-540 (567)
215 2ymu_A WD-40 repeat protein; u 56.2 2.6E+02 0.009 31.6 19.5 120 151-301 367-488 (577)
216 2xyi_A Probable histone-bindin 56.2 51 0.0017 36.6 11.2 66 187-264 196-264 (430)
217 2pm7_B Protein transport prote 56.1 1.9E+02 0.0064 29.9 18.1 119 240-381 171-295 (297)
218 3i2n_A WD repeat-containing pr 54.6 1.5E+02 0.005 30.9 14.2 66 186-264 32-100 (357)
219 3iz6_a 40S ribosomal protein R 54.3 2.3E+02 0.008 30.4 23.6 100 148-264 178-281 (380)
220 4h5i_A Guanine nucleotide-exch 53.9 2.3E+02 0.008 30.3 17.2 146 201-375 157-303 (365)
221 3bg1_A Protein SEC13 homolog; 51.7 64 0.0022 34.0 10.7 30 343-381 273-303 (316)
222 2z2n_A Virginiamycin B lyase; 50.4 2.1E+02 0.0072 28.8 26.8 180 150-378 36-218 (299)
223 3o4h_A Acylamino-acid-releasin 50.1 1.1E+02 0.0038 35.3 13.3 184 152-378 134-320 (582)
224 3v9f_A Two-component system se 50.0 92 0.0031 37.8 13.0 128 150-298 515-645 (781)
225 3oyo_A Hemopexin fold protein 49.9 53 0.0018 33.7 9.1 108 183-316 69-197 (225)
226 2mad_H Methylamine dehydrogena 48.4 3E+02 0.01 29.9 28.6 103 151-264 48-157 (373)
227 1nir_A Nitrite reductase; hemo 47.6 2.2E+02 0.0076 32.8 15.3 62 184-264 148-212 (543)
228 1itv_A MMP9; adaptive molecula 47.3 1.1E+02 0.0039 30.4 10.9 103 184-317 64-174 (195)
229 2gop_A Trilobed protease; beta 47.0 2.7E+02 0.0091 29.0 18.5 137 150-314 85-250 (347)
230 3ott_A Two-component system se 47.0 4.4E+02 0.015 31.5 21.1 192 148-378 390-592 (758)
231 3bg1_A Protein SEC13 homolog; 46.9 2.7E+02 0.0091 29.0 15.2 69 185-270 71-142 (316)
232 1pex_A Collagenase-3, MMP-13; 46.2 2.4E+02 0.0083 28.3 16.0 105 184-318 79-193 (207)
233 3dm0_A Maltose-binding peripla 45.4 3.6E+02 0.012 31.7 17.1 65 186-264 396-462 (694)
234 2xbg_A YCF48-like protein; pho 45.2 3E+02 0.01 29.1 20.6 176 159-380 108-287 (327)
235 1pby_B Quinohemoprotein amine 45.1 2.4E+02 0.0082 28.9 13.9 180 150-374 115-312 (337)
236 2yeq_A Apased, PHOD, alkaline 44.4 23 0.0008 41.4 6.0 24 883-906 358-383 (527)
237 2dg1_A DRP35, lactonase; beta 44.2 2.9E+02 0.0099 28.6 15.7 129 231-378 48-177 (333)
238 3fm0_A Protein CIAO1; WDR39,SG 44.1 3E+02 0.01 29.1 14.7 130 151-302 84-216 (345)
239 2pm7_B Protein transport prote 44.1 2.8E+02 0.0096 28.4 18.8 64 185-264 67-133 (297)
240 1k32_A Tricorn protease; prote 43.9 5.7E+02 0.019 31.9 19.9 180 150-379 226-416 (1045)
241 4aow_A Guanine nucleotide-bind 43.7 2.9E+02 0.0098 28.4 17.8 62 186-264 186-247 (340)
242 4e54_B DNA damage-binding prot 42.7 1.7E+02 0.0057 32.3 12.8 22 238-264 307-328 (435)
243 2z06_A Putative uncharacterize 42.4 29 0.001 36.4 5.7 67 698-776 1-70 (252)
244 3kci_A Probable E3 ubiquitin-p 42.0 2.2E+02 0.0075 31.2 13.5 63 229-300 274-344 (389)
245 2z2n_A Virginiamycin B lyase; 41.9 2.8E+02 0.0097 27.8 24.0 180 151-378 79-260 (299)
246 3kci_A Probable E3 ubiquitin-p 41.3 3.8E+02 0.013 29.2 18.8 66 229-299 168-239 (389)
247 3dm0_A Maltose-binding peripla 41.2 5E+02 0.017 30.4 21.4 181 149-376 451-636 (694)
248 4a2l_A BT_4663, two-component 41.2 5.4E+02 0.019 30.9 23.3 191 151-380 378-579 (795)
249 1t70_A Phosphatase; crystal, X 41.1 33 0.0011 36.1 5.9 66 698-775 1-69 (255)
250 2mad_H Methylamine dehydrogena 40.6 1.6E+02 0.0054 32.3 11.9 69 184-264 278-351 (373)
251 2xbg_A YCF48-like protein; pho 40.4 3.6E+02 0.012 28.5 20.5 175 158-380 23-201 (327)
252 1su3_A Interstitial collagenas 38.5 4.8E+02 0.016 29.5 15.8 107 184-318 318-433 (450)
253 1su3_A Interstitial collagenas 36.7 5.1E+02 0.017 29.3 17.1 156 179-377 267-437 (450)
254 2ece_A 462AA long hypothetical 36.5 5.2E+02 0.018 29.3 15.4 76 237-318 94-174 (462)
255 1qks_A Cytochrome CD1 nitrite 36.2 5.4E+02 0.019 29.8 16.2 208 149-378 319-544 (567)
256 1q7f_A NHL, brain tumor CG1071 35.6 3.6E+02 0.012 27.2 22.4 166 150-350 100-268 (286)
257 3ba0_A Macrophage metalloelast 35.4 4.8E+02 0.016 28.5 18.0 160 178-377 184-355 (365)
258 3odt_A Protein DOA1; ubiquitin 34.6 1.9E+02 0.0064 29.3 10.8 52 240-302 30-81 (313)
259 1gen_A Gelatinase A; hydrolase 33.3 3.9E+02 0.013 26.9 17.9 159 177-374 33-204 (218)
260 3ei3_B DNA damage-binding prot 33.1 4.6E+02 0.016 27.6 18.1 146 186-372 87-236 (383)
261 3of7_A Regulator of chromosome 32.7 2.2E+02 0.0074 32.3 11.7 64 228-300 265-340 (473)
262 3iuj_A Prolyl endopeptidase; h 32.5 6.8E+02 0.023 29.5 18.8 152 201-381 259-414 (693)
263 1xfd_A DIP, dipeptidyl aminope 32.3 5.3E+02 0.018 30.1 15.7 109 151-272 38-150 (723)
264 2qc5_A Streptogramin B lactona 32.1 4E+02 0.014 26.6 24.0 180 150-378 83-265 (300)
265 3u4y_A Uncharacterized protein 32.0 4.3E+02 0.015 27.0 18.3 190 151-380 109-312 (331)
266 1gen_A Gelatinase A; hydrolase 31.8 4.1E+02 0.014 26.7 14.0 65 184-264 87-154 (218)
267 1xfd_A DIP, dipeptidyl aminope 31.6 6.7E+02 0.023 29.2 19.4 62 148-219 89-150 (723)
268 2pbi_B Guanine nucleotide-bind 31.5 4.9E+02 0.017 27.5 22.0 104 240-374 211-317 (354)
269 1flg_A Protein (quinoprotein e 30.6 1.6E+02 0.0055 34.5 10.4 81 200-297 465-545 (582)
270 3k26_A Polycomb protein EED; W 30.6 4.6E+02 0.016 26.9 16.4 143 202-374 45-194 (366)
271 4h1s_A 5'-nucleotidase; hydrol 30.0 47 0.0016 38.7 5.4 66 699-774 5-95 (530)
272 3k26_A Polycomb protein EED; W 29.6 4.8E+02 0.016 26.8 13.9 63 185-264 85-148 (366)
273 2xyi_A Probable histone-bindin 28.7 3.5E+02 0.012 29.5 12.5 26 233-263 134-160 (430)
274 1hxn_A Hemopexin, HPX; heme, b 28.7 4.5E+02 0.015 26.5 12.0 62 237-316 27-89 (219)
275 2qc5_A Streptogramin B lactona 27.9 4.6E+02 0.016 26.1 26.9 181 150-378 41-223 (300)
276 2ece_A 462AA long hypothetical 27.5 7.2E+02 0.025 28.2 15.6 60 148-211 104-174 (462)
277 3b7f_A Glycosyl hydrolase, BNR 26.6 6.3E+02 0.021 27.2 20.7 195 151-380 32-270 (394)
278 1yfq_A Cell cycle arrest prote 26.1 5.4E+02 0.018 26.2 16.4 72 185-272 23-96 (342)
279 1k32_A Tricorn protease; prote 26.0 1E+03 0.035 29.5 23.8 198 150-380 33-243 (1045)
280 3fvz_A Peptidyl-glycine alpha- 25.9 5.8E+02 0.02 26.5 30.0 203 150-378 69-283 (329)
281 3dr2_A Exported gluconolactona 25.2 5.7E+02 0.019 26.2 16.1 192 150-379 67-274 (305)
282 1a12_A RCC1, regulator of chro 24.6 3.2E+02 0.011 30.1 11.0 64 229-300 295-364 (413)
283 3lrv_A PRE-mRNA-splicing facto 24.0 6.2E+02 0.021 26.2 20.8 64 185-264 139-202 (343)
284 2hz6_A Endoplasmic reticulum t 23.9 20 0.0007 39.4 0.8 143 94-297 1-145 (369)
285 3c0t_A Mediator of RNA polymer 23.8 57 0.0019 32.9 3.8 39 881-922 103-141 (207)
286 3hrp_A Uncharacterized protein 23.5 7.4E+02 0.025 27.0 25.6 194 150-380 152-362 (409)
287 1pgu_A Actin interacting prote 22.6 8.4E+02 0.029 27.3 18.5 105 240-373 457-573 (615)
288 4ggc_A P55CDC, cell division c 22.2 6E+02 0.021 25.4 21.7 94 150-264 89-182 (318)
289 1qhu_A Protein (hemopexin); be 22.2 8.8E+02 0.03 27.4 17.1 59 184-264 158-216 (460)
290 3mvd_K Regulator of chromosome 21.9 8E+02 0.027 26.7 26.1 63 177-247 137-206 (423)
291 4ggc_A P55CDC, cell division c 21.7 6.1E+02 0.021 25.3 17.7 52 151-211 46-99 (318)
292 1erj_A Transcriptional repress 21.7 6.7E+02 0.023 26.7 12.9 110 235-376 131-242 (393)
293 3sjl_D Methylamine dehydrogena 21.5 1.9E+02 0.0065 32.1 8.1 106 147-264 244-364 (386)
294 2ghs_A AGR_C_1268P; regucalcin 20.2 7.4E+02 0.025 25.7 18.3 150 184-373 60-213 (326)
No 1
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=100.00 E-value=9.7e-72 Score=609.45 Aligned_cols=291 Identities=47% Similarity=0.851 Sum_probs=276.3
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHcCCCCCCC
Q 001901 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (998)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ep~~l~~~~~i~vvGDiHG~~~dL~~il~~~g~~~~~~ 727 (998)
++++|++|++.+.|++.. .+.|+++++..||++|+++|.+||+++++.+|++||||||||+.+|+++|+..|+++.+
T Consensus 8 ~d~~i~~l~~~~~~~~~~--~~~l~~~~~~~l~~~~~~il~~ep~ll~~~~~i~viGDIHG~~~~L~~ll~~~g~~~~~- 84 (299)
T 3e7a_A 8 LDSIIGRLLEVQGSRPGK--NVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES- 84 (299)
T ss_dssp HHHHHHHHHTTTTSCTTC--CCCCCHHHHHHHHHHHHHHHHHSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCSTTSS-
T ss_pred HHHHHHHHHhccccCCCc--ccCCCHHHHHHHHHHHHHHHHhCCCeeecCCCEEEEecCCCCHHHHHHHHHHhCCCCCc-
Confidence 789999999988776543 45689999999999999999999999999999999999999999999999999998765
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhhhhhhhhhh
Q 001901 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (998)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (998)
+|||||||||||++|+||+.+|++||++||+++++||||||.+.++..|||++||.++|+ ..+|+.+.++|
T Consensus 85 -----~~vfLGD~VDrG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~i~~~ygF~~e~~~ky~----~~l~~~~~~~f 155 (299)
T 3e7a_A 85 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN----IKLWKTFTDCF 155 (299)
T ss_dssp -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHHSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred -----cEEeCCcccCCCCCcHHHHHHHHHHHhhCCCcEEEEecCchhhhhcccccchHHHHHHhh----HHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999995 46999999999
Q ss_pred cccceeEEEcCeEEEecCCccCcccCHHhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCCceeeCHHHH
Q 001901 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (998)
Q Consensus 808 ~~LP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (998)
++||+++++++++|||||||+|.+.++++|+++.||.+++..+ +++|||||||.+ ...+|.+|.||.| +.||++++
T Consensus 156 ~~LPlaaii~~~il~vHGGlsp~~~~l~~i~~i~R~~~~p~~~-~~~dllWsDP~~--~~~~~~~~~RG~~-~~fG~~~~ 231 (299)
T 3e7a_A 156 NCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQG-LLCDLLWSDPDK--DVQGWGENDRGVS-FTFGAEVV 231 (299)
T ss_dssp TTCCCEEEETTTEEEESSCCCTTCCCTHHHHTCCSSCCCCSSS-HHHHHHHCEECT--TCSSEEECTTSSS-EEECHHHH
T ss_pred hhCCceEEECCeEEEEcCccCcccCCHHHHHhccCCCcCCcch-hhhhhhcCCccc--cccCcccCCCCcc-eeeCHHHH
Confidence 9999999999999999999999999999999999999988765 899999999986 3579999999999 78999999
Q ss_pred HHHHHHcCCcEEEEcccccccceEEecCCeEEEEeccccccCCCCCeEEEEEEcCCceEEeEEeccC
Q 001901 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPL 954 (998)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~ 954 (998)
++||++||+++||||||++++||+++++++|||||||||||+.++|+||||.+++++.+++++|.|.
T Consensus 232 ~~fl~~n~l~~IiR~Hq~v~~Gy~~~~~~~~iTvfSapnY~~~~~N~~a~l~~~~~~~~~~~~~~~~ 298 (299)
T 3e7a_A 232 AKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 298 (299)
T ss_dssp HHHHHHHTCSEEEECCSCCTTSEEEETTTTEEEEBCCSSGGGTCCCCEEEEEECTTCCEEEEEECCC
T ss_pred HHHHHHCCCeEEEEcCeeeecceEEecCCeEEEEECCcccCCCCCccEEEEEECCCCcEEEEEecCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999884
No 2
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=100.00 E-value=4.5e-68 Score=590.50 Aligned_cols=319 Identities=45% Similarity=0.807 Sum_probs=274.4
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHcCCCCCCC
Q 001901 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (998)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ep~~l~~~~~i~vvGDiHG~~~dL~~il~~~g~~~~~~ 727 (998)
++++|+.|++.+.+++. ....|+++++..||++|+++|++||+++++.+|++||||||||+.+|+++|+..|+++.+
T Consensus 9 ~d~~i~~l~~~~~~~~~--~~~~l~~~~~~~l~~~~~~il~~e~~l~~~~~~i~viGDIHG~~~~L~~ll~~~g~~~~~- 85 (330)
T 1fjm_A 9 LDSIIGRLLEVQGSRPG--KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES- 85 (330)
T ss_dssp HHHHHHHHHHTTTTCTT--CCCCCCHHHHHHHHHHHHHHHHHSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCSTTSS-
T ss_pred HHHHHHHHHhccccCCc--ccCCCCHHHHHHHHHHHHHHHHhCCCeEeecCceEEecCCCCCHHHHHHHHHHhCCCCcc-
Confidence 78899999987665543 234789999999999999999999999999999999999999999999999999998765
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhhhhhhhhhh
Q 001901 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (998)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (998)
+|||||||||||++|+|||.+|++||+.||.++++||||||.+.++..|||++||.++|+ ..+|+.+.++|
T Consensus 86 -----~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~~gf~~e~~~~y~----~~l~~~~~~~f 156 (330)
T 1fjm_A 86 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN----IKLWKTFTDCF 156 (330)
T ss_dssp -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHHSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred -----eEEeCCCcCCCCCChHHHHHHHHHhhhhcCCceEEecCCchHhhhhhhhhhhhhhhhhcc----HHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999985 35899999999
Q ss_pred cccceeEEEcCeEEEecCCccCcccCHHhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCCceeeCHHHH
Q 001901 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (998)
Q Consensus 808 ~~LP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (998)
++||+++++++++|||||||+|.+.++++|+.+.||.+.+..+ +++|+|||||.. ...+|.+|.||.+ +.||++++
T Consensus 157 ~~LPl~~~i~~~i~~vHgGl~p~~~~l~qi~~i~r~~e~~~~g-~~~dlLWsdp~~--~~~~w~~~~rG~~-~~fG~~~~ 232 (330)
T 1fjm_A 157 NCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQG-LLCDLLWSDPDK--DVQGWGENDRGVS-FTFGAEVV 232 (330)
T ss_dssp TTCCCEEEETTTEEEESSCCCTTCSCHHHHHHCCSSCCCCSSS-HHHHHHHCEECT--TCSSEEECTTSSS-EEECHHHH
T ss_pred HhCCceEEEcCcEEEEccCCCcccCCHHHHhhhhcCccCcccc-hHHHHHhcCCcc--ccCCcCcccCCCc-eeeChHHH
Confidence 9999999999999999999999999999999999999887654 889999999986 3578999999999 78999999
Q ss_pred HHHHHHcCCcEEEEcccccccceEEecCCeEEEEeccccccCCCCCeEEEEEEcCCceEEeEEeccCCCCCCCCCCCCcc
Q 001901 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPER 967 (998)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 967 (998)
++||++|++++||||||++++||+++++++|||||||||||+.++|+||||.|++++.+++++|.|.+.. ..
T Consensus 233 ~~fl~~~~l~liir~Hq~v~~Gy~~~~~~~lvTvfSapnY~~~~~N~ga~l~i~~~~~~~~~~~~~~~~~-~~------- 304 (330)
T 1fjm_A 233 AKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKN-KG------- 304 (330)
T ss_dssp HHHHHHHTCSEEEECCSCCTTSEEEETTTTEEEEBCCTTCCSSSCCCEEEEEECTTCCEEEEEECCCC------------
T ss_pred HHHHHhCCCceEecccccccCCeEEccCCeEEEEeCCcccccCCCCcEEEEEECCCCcEeEEEecCCccc-cc-------
Confidence 9999999999999999999999999999999999999999999999999999999999999999998654 10
Q ss_pred cchhhHHHHh-hcCCCCCCCCCCCCC
Q 001901 968 HIEDTWMQEL-NANRPPTPTRGRPQN 992 (998)
Q Consensus 968 ~~~~~~~~~~-~~~~~~~~~~~~~~~ 992 (998)
...|+.++ ...||+||||++|+.
T Consensus 305 --~~~~~~~~~~~~~~~~~~~~~~~~ 328 (330)
T 1fjm_A 305 --KYGQFSGLNPGGRPITPPRNSAKA 328 (330)
T ss_dssp --------------------------
T ss_pred --ccccccccccccCCCCCCCCcccc
Confidence 11244322 257999999998863
No 3
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=100.00 E-value=5.9e-68 Score=583.62 Aligned_cols=294 Identities=32% Similarity=0.581 Sum_probs=272.9
Q ss_pred ChhHHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCC----eEEEecCCCCHHHHHHHHHHc
Q 001901 645 NSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAP----IKIFGDLHGQFGDLMRLFDEY 720 (998)
Q Consensus 645 ~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ep~~l~~~~~----i~vvGDiHG~~~dL~~il~~~ 720 (998)
.++++++|+++.+.+ .|+++++.+||++|+++|++||++++++.| ++||||||||+.+|+++|+..
T Consensus 13 ~~~~~~~~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~l~~l~~p~~~ri~viGDIHG~~~~L~~ll~~~ 82 (315)
T 3h63_A 13 ISFMKELMQWYKDQK----------KLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELN 82 (315)
T ss_dssp HHHHHHHHHHHHTTC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCCTTCEEEEECCCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHHhCCCeEEEecCCCceEEEEecCCCCHHHHHHHHHHh
Confidence 456888999998753 588999999999999999999999999877 999999999999999999999
Q ss_pred CCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhhh
Q 001901 721 GSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAW 800 (998)
Q Consensus 721 g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~ 800 (998)
|+++... +|||||||||||++|+||+.+|++||++||++|++||||||.+.++..|||.+||.++|+ ..+|
T Consensus 83 g~~~~~~-----~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~ygf~~e~~~k~~----~~l~ 153 (315)
T 3h63_A 83 GLPSETN-----PYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYT----AQMY 153 (315)
T ss_dssp CCCBTTB-----CEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHSC----HHHH
T ss_pred CCCCCCC-----EEEEeCCccCCCcChHHHHHHHHHhhhhcCCcEEEEecCcccccccccccccHHHHHHhh----hHHH
Confidence 9987652 599999999999999999999999999999999999999999999999999999999995 4699
Q ss_pred hhhhhhhcccceeEEEcCeEEEecCCc-cCcccCHHhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCCc
Q 001901 801 HRINRLFNWLPLAALIEKKIICMHGGI-GRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGL 879 (998)
Q Consensus 801 ~~~~~~f~~LP~aa~i~~~il~vHgGi-~~~~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~ 879 (998)
+.+.++|++||+++++++++||||||| ++.+.++++|+.+.||.+++..+ +++|||||||.+ ..+|.+|.||.|
T Consensus 154 ~~~~~~f~~LPla~ii~~~il~vHGGl~sp~~~~l~~i~~i~R~~~~p~~g-~~~dllWsDP~~---~~g~~~s~RG~g- 228 (315)
T 3h63_A 154 ELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG-PMCDLLWSDPQP---QNGRSISKRGVS- 228 (315)
T ss_dssp HHHHHHHTTSCSEEEETTTEEECSSCCCSSTTCCHHHHHHCCCSSCCCSSS-HHHHHHHCEECS---SSSEEECTTSSS-
T ss_pred HHHHHHHhcCCcEEEEcCCEEEeCCCCCCcccCCHHHHHhCcccccccccc-hhhhheecCCCC---CCCcCcCCCCce-
Confidence 999999999999999999999999999 78899999999999999887765 899999999985 468999999999
Q ss_pred eeeCHHHHHHHHHHcCCcEEEEcccccccceEEecCCeEEEEeccccccCCCCCeEEEEEEc-CCceEEeEEeccCCCCC
Q 001901 880 VTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLG-RDLVVVPKLIHPLPPAI 958 (998)
Q Consensus 880 ~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~~~-~~~~~~~~~~~~~~~~~ 958 (998)
+.||++++++||++||+++||||||++++||+++++++|||||||||||+.++|+||||.++ +++...++.|.+.|...
T Consensus 229 ~~fg~~~~~~fl~~n~l~~iiR~Hq~~~~Gy~~~~~~~~iTvfSapnY~~~~~N~~a~~~~~~~~~~~~~~~f~~~~~~~ 308 (315)
T 3h63_A 229 CQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHPN 308 (315)
T ss_dssp EEECHHHHHHHHHHHTCSEEEECCSCCTTSEEEEGGGTEEEECCCTTGGGTSCCCEEEEEEETTEEEEEEEEECCCCCCS
T ss_pred EEECHHHHHHHHHHcCCcEEEEeceeecCCeEEecCCeEEEEECCcccCCCCCccEEEEEEECCCCeEeeEEEecCCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999995 67888999999887665
Q ss_pred CCCC
Q 001901 959 SSPE 962 (998)
Q Consensus 959 ~~~~ 962 (998)
..|+
T Consensus 309 ~~p~ 312 (315)
T 3h63_A 309 VKPM 312 (315)
T ss_dssp CCTT
T ss_pred CCCc
Confidence 4443
No 4
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-68 Score=589.01 Aligned_cols=297 Identities=34% Similarity=0.620 Sum_probs=273.3
Q ss_pred CChhHHHHH-HHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCC------eEEEecCCCCHHHHHHH
Q 001901 644 INSVPKKVI-AHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAP------IKIFGDLHGQFGDLMRL 716 (998)
Q Consensus 644 ~~~~~~~~i-~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ep~~l~~~~~------i~vvGDiHG~~~dL~~i 716 (998)
+.+.++++| ++|.+.+ .|+++++..||++|+++|++||+++++..| ++||||||||+.+|+++
T Consensus 13 ~~~~~~~~i~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~~~~l~~p~~~~~ri~viGDIHG~~~~L~~l 82 (335)
T 3icf_A 13 SQEFISKMVNDLFLKGK----------YLPKKYVAAIISHADTLFRQEPSMVELENNSTPDVKISVCGDTHGQFYDVLNL 82 (335)
T ss_dssp CHHHHHHHHHHTGGGTC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCSSSTTCEEEEECCCTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHHhCCCeEEecCCcccCceEEEEecCCCCHHHHHHH
Confidence 456688899 7776542 588999999999999999999999999999 99999999999999999
Q ss_pred HHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcc
Q 001901 717 FDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDG 796 (998)
Q Consensus 717 l~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~ 796 (998)
|+..|+++... +|||||||||||++|+||+.+|++||++||++|++||||||.+.++..|||.+||.++|+
T Consensus 83 l~~~g~~~~~~-----~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~ygf~~e~~~k~~---- 153 (335)
T 3icf_A 83 FRKFGKVGPKH-----TYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHESDNMNKIYGFEDECKYKYS---- 153 (335)
T ss_dssp HHHHCCCBTTE-----EEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHHSHHHHHHHHSC----
T ss_pred HHHcCCCCCCc-----EEEEeCCccCCCcChHHHHHHHHHHhhhCCCcEEEecCchhhhhhhhccccchHhHhhcc----
Confidence 99999986541 699999999999999999999999999999999999999999999999999999999995
Q ss_pred hhhhhhhhhhhcccceeEEEcCeEEEecCCc-cCcccCHHhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCC
Q 001901 797 IWAWHRINRLFNWLPLAALIEKKIICMHGGI-GRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNAR 875 (998)
Q Consensus 797 ~~~~~~~~~~f~~LP~aa~i~~~il~vHgGi-~~~~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~~~~~~~n~r 875 (998)
..+|+.+.++|++||++++++++|||||||| +|.+.++++|+.+.|+.+++..+ +++|||||||.+ ..+|.+|.|
T Consensus 154 ~~l~~~~~~~f~~LPlaaii~~~il~vHGGl~sp~~~~ld~i~~i~R~~~~p~~g-~~~dlLWSDP~~---~~g~~~s~R 229 (335)
T 3icf_A 154 QRIFNMFAQSFESLPLATLINNDYLVMHGGLPSDPSATLSDFKNIDRFAQPPRDG-AFMELLWADPQE---ANGMGPSQR 229 (335)
T ss_dssp HHHHHHHHHHHTTSCSEEEETTTEEECSSCCCSCTTCCHHHHHTCCCSSCCCSSS-HHHHHHHCEECS---SSSEEECCC
T ss_pred HHHHHHHHHHHhhcceeEEEcCcEEEecCCcCCCccCCHHHHHhCcccccccccc-chhhhhccCCCC---cCCcccCCC
Confidence 4699999999999999999999999999999 78999999999999999887765 899999999985 468999999
Q ss_pred CCCceeeCHHHHHHHHHHcCCcEEEEcccccccceEEecCCeEEEEeccccccCCCCCeEEEEEEcC-----------Cc
Q 001901 876 GPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGR-----------DL 944 (998)
Q Consensus 876 g~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~~~~-----------~~ 944 (998)
|.| +.||++++++||++|++++||||||++++||+++++++|||||||||||+.++|+||||.|++ ++
T Consensus 230 G~g-~~FG~~~~~~fl~~n~l~~IiR~Hq~~~~Gy~~~~~~~liTvfSapnYc~~~~N~~a~~~i~~~~~~~~~~~~~~~ 308 (335)
T 3icf_A 230 GLG-HAFGPDITDRFLRNNKLRKIFRSHELRMGGVQFEQKGKLMTVFSAPNYCDSQGNLGGVIHVVPGHGILQAGRNDDQ 308 (335)
T ss_dssp C---EEECHHHHHHHHHHTTCSEEEECSSCCTEEEEEEGGGTEEEECCCTTGGGTSCCEEEEEEECTTCCCCBTTTBCCT
T ss_pred CCc-eeeCHHHHHHHHHHCCCeEEEEcCceecCeEEEecCCcEEEEECCcccCCCCCCceEEEEEecccccccccccccC
Confidence 999 689999999999999999999999999999999999999999999999999999999999999 88
Q ss_pred eEEeEEeccCCCCCCCCCCC
Q 001901 945 VVVPKLIHPLPPAISSPETS 964 (998)
Q Consensus 945 ~~~~~~~~~~~~~~~~~~~~ 964 (998)
.+.++.|.+.|.....|+.+
T Consensus 309 ~~~~~~f~~~~~~~~~p~~y 328 (335)
T 3icf_A 309 NLIIETFEAVEHPDIKPMAY 328 (335)
T ss_dssp TEEEEEECCCCCCSCCTTTT
T ss_pred ceeEEEEecCCCCCCCchhh
Confidence 99999999987766555544
No 5
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=100.00 E-value=8.8e-68 Score=587.37 Aligned_cols=290 Identities=36% Similarity=0.604 Sum_probs=267.8
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHcCCCCCCC
Q 001901 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (998)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ep~~l~~~~~i~vvGDiHG~~~dL~~il~~~g~~~~~~ 727 (998)
++.+++++++.+ .|+++++.+||++|+++|++||+++++.+|++||||||||+.+|+++|+..+.++.+
T Consensus 30 ~~~~~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~ll~~~~pi~ViGDIHG~~~dL~~ll~~~g~~~~~- 98 (357)
T 3ll8_A 30 VDILKAHLMKEG----------RLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT- 98 (357)
T ss_dssp HHHHHHHHHTTC----------CBCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTC-
T ss_pred HHHHHHHHHhCC----------CCCHHHHHHHHHHHHHHHHhCCCeEEecccceeeccCCCCHHHHHHHHHhcCCCCCc-
Confidence 688899998753 588999999999999999999999999999999999999999999999999988765
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhhhhhhhhhh
Q 001901 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (998)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (998)
+|||||||||||++|+||+.+|++||++||++|++||||||.+.++..|||++||.++|+ ..+|+.+.++|
T Consensus 99 -----~~vfLGD~VDRG~~s~Evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~ygF~~E~~~ky~----~~l~~~~~~~f 169 (357)
T 3ll8_A 99 -----RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS----ERVYDACMDAF 169 (357)
T ss_dssp -----CEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHSSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred -----EEEECCCccCCCcChHHHHHHHHHhhhhcCCcEEEEeCchhhhhhhcccCchhhhhhccc----hhHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999995 46999999999
Q ss_pred cccceeEEEcCeEEEecCCccCcccCHHhhhhccCCcccCCCCcceeccccCCCCCCCC----CCCccc-CCCCCCceee
Q 001901 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDS----VEGLRP-NARGPGLVTF 882 (998)
Q Consensus 808 ~~LP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~----~~~~~~-n~rg~~~~~f 882 (998)
++||++++++++||||||||+|.+.++++|+.|.||.+++..+ +++|||||||.+... ..+|.+ +.||.| +.|
T Consensus 170 ~~LPlaaii~~~il~vHGGlsp~l~~ld~I~~i~R~~e~p~~g-~~~DlLWSDP~~~~~~~~~~~~~~~~s~RG~g-~~F 247 (357)
T 3ll8_A 170 DCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG-PMCDILWSDPLEDFGNEKTQEHFTHNTVRGCS-YFY 247 (357)
T ss_dssp HTSCSEEEETTTEEECSSCCCTTCCSHHHHHTCCCSSCCCSSS-HHHHHHHCEECTTTTSCSCCCSEEECTTTTSS-EEE
T ss_pred HhCCcceEEcccEEEEecCcCcccCCHHHHhhccccccCCccC-chhHhhccCccccccccccccccccCCCCCCc-eEE
Confidence 9999999999999999999999999999999999999988766 899999999986421 245765 579999 689
Q ss_pred CHHHHHHHHHHcCCcEEEEcccccccceEEecCC------eEEEEeccccccCCCCCeEEEEEEcCCceEEeEEeccCCC
Q 001901 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQG------HLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPP 956 (998)
Q Consensus 883 g~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~------~~iTvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~ 956 (998)
|++++++||++||+++||||||++++||++++++ +|||||||||||+.++|+||||.+++++ +.++.|.+.|.
T Consensus 248 G~~~~~~Fl~~n~l~~IiRaHq~~~~Gy~~~~~~~~~g~~~liTvFSApnYc~~~~N~~a~l~~~~~~-~~~~~f~~~~h 326 (357)
T 3ll8_A 248 SYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSPH 326 (357)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSCCTTSEEECCBCTTTSSBSEEEECCCTTGGGTSCCCEEEEEEETTE-EEEEEECCCCC
T ss_pred ChHHHHHHHHHCCCeEEEEeccccccceEEecCCcCCCCCcEEEEECCCccCCCCCccEEEEEEECCc-ceEEEecCCCC
Confidence 9999999999999999999999999999999886 6999999999999999999999998876 67889988776
Q ss_pred CCCC
Q 001901 957 AISS 960 (998)
Q Consensus 957 ~~~~ 960 (998)
.+..
T Consensus 327 p~~~ 330 (357)
T 3ll8_A 327 PYWL 330 (357)
T ss_dssp CCCC
T ss_pred CCcC
Confidence 6543
No 6
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=100.00 E-value=1e-64 Score=560.55 Aligned_cols=287 Identities=39% Similarity=0.726 Sum_probs=269.7
Q ss_pred hHHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHcCCCCCC
Q 001901 647 VPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTA 726 (998)
Q Consensus 647 ~~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ep~~l~~~~~i~vvGDiHG~~~dL~~il~~~g~~~~~ 726 (998)
.++.+|+.|++.+ .|+++++..||++|+++|++||+++++..|++||||||||+.+|+++|+..+.++.+
T Consensus 9 ~~~~~i~~~~~~~----------~l~~~~~~~l~~~~~~il~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~ 78 (309)
T 2ie4_C 9 ELDQWIEQLNECK----------QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDT 78 (309)
T ss_dssp HHHHHHHHHTTTC----------CCCHHHHHHHHHHHHHHHHHSCTTEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTS
T ss_pred HHHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHHhCCCEEeccCCEEEEecCCCCHHHHHHHHHHcCCCCCC
Confidence 3788999987642 589999999999999999999999999999999999999999999999999987765
Q ss_pred CCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhhhhhhhhh
Q 001901 727 GDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRL 806 (998)
Q Consensus 727 ~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~ 806 (998)
+|||||||||||++|+|||.+|++||++||.++++||||||.+.++..|||.+||.++||.. .+|+.+.++
T Consensus 79 ------~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~~gf~~e~~~~yg~~---~l~~~~~~~ 149 (309)
T 2ie4_C 79 ------NYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNA---NVWKYFTDL 149 (309)
T ss_dssp ------CEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSTTGGGTSSHHHHHHHHSSST---HHHHHHHHH
T ss_pred ------EEEEeCCccCCCCChHHHHHHHHHHHhhCCCcEEEEeCCCCHHHHhhhhhhhHHHHhhcccH---HHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999863 599999999
Q ss_pred hcccceeEEEcCeEEEecCCccCcccCHHhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCCceeeCHHH
Q 001901 807 FNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDR 886 (998)
Q Consensus 807 f~~LP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~ 886 (998)
|++||+++++++++|||||||+|.+.++++|+.++|+.+++..+ .++|+|||||.. ..+|.++.||.| +.||+++
T Consensus 150 ~~~LPl~~~i~~~il~vHgGl~p~~~~~~~i~~i~r~~~~~~~~-~~~dllWsdp~~---~~~~~~s~RG~g-~~fG~~~ 224 (309)
T 2ie4_C 150 FDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEG-PMCDLLWSDPDD---RGGWGISPRGAG-YTFGQDI 224 (309)
T ss_dssp TTSSCSCEEETTTEEECSSCCCTTCCSHHHHHTSCCSSCCCSSS-HHHHHHHCEECS---SSSEEECTTSSS-EEECHHH
T ss_pred HHhCCceEEEcCcEEEECCCCCCcccCHHHHHhhcccccCChhH-HHHHHhhCCCcc---ccccccCCCCcc-cccCHHH
Confidence 99999999999999999999999999999999999999887655 889999999985 478999999999 6899999
Q ss_pred HHHHHHHcCCcEEEEcccccccceEEecCCeEEEEeccccccCCCCCeEEEEEEcCCceEEeEEeccCCCC
Q 001901 887 VMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPA 957 (998)
Q Consensus 887 ~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~~ 957 (998)
+++||++||+++||||||++++||+++++++|||||||||||+.++|+||+|.+++++.++++.|.|.+..
T Consensus 225 ~~~fl~~n~l~~iir~Hq~~~~G~~~~~~~~~iTvfSa~ny~~~~~N~~a~l~i~~~~~~~~~~~~~~~~~ 295 (309)
T 2ie4_C 225 SETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRR 295 (309)
T ss_dssp HHHHHHHTTCSEEEECCSCCTEEEEEETTTTEEEECCCSSGGGTSCCEEEEEEECTTCCEEEEEECCCC--
T ss_pred HHHHHHHcCCeEEEecCcceeCCEEEecCCeEEEEECCcccccCCCCeEEEEEECCCCcEeEEEEeCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999987653
No 7
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=100.00 E-value=1.5e-64 Score=580.22 Aligned_cols=290 Identities=37% Similarity=0.610 Sum_probs=267.6
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHcCCCCCCC
Q 001901 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (998)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ep~~l~~~~~i~vvGDiHG~~~dL~~il~~~g~~~~~~ 727 (998)
++.++++|++.+ .|+++++..||++|+++|++||+++++.+|++|||||||||.+|+++|+..+.++.+
T Consensus 43 ~d~l~~~~~~~~----------~l~~~~i~~L~~~a~~il~~Ep~ll~l~~pI~VIGDIHGq~~dL~~LL~~~g~p~~d- 111 (521)
T 1aui_A 43 VDILKAHLMKEG----------RLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT- 111 (521)
T ss_dssp HHHHHHHHHTTC----------CBCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTC-
T ss_pred HHHHHHHHHhCC----------CCCHHHHHHHHHHHHHHHHhCCCeEeeccceeeccCCCCCHHHHHHHHHhcCCCCcc-
Confidence 677888887653 588999999999999999999999999999999999999999999999998887755
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhhhhhhhhhh
Q 001901 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (998)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (998)
+|||||||||||++|+|||.+|++||++||++|++||||||.+.++..|||++||..+|+ ..+|+.+.++|
T Consensus 112 -----~yVFLGDyVDRGp~S~Evl~lL~aLk~~~P~~v~lLRGNHE~~~l~~~ygF~~E~~~ky~----~~l~~~~~~~f 182 (521)
T 1aui_A 112 -----RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS----ERVYDACMDAF 182 (521)
T ss_dssp -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHSSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred -----eEEEcCCcCCCCCCHHHHHHHHHHHhhhCCCeEEEecCCccHHHHHHHhCccHHHHHhhh----hHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999996 46999999999
Q ss_pred cccceeEEEcCeEEEecCCccCcccCHHhhhhccCCcccCCCCcceeccccCCCCCCCC----CCCcccC-CCCCCceee
Q 001901 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDS----VEGLRPN-ARGPGLVTF 882 (998)
Q Consensus 808 ~~LP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~----~~~~~~n-~rg~~~~~f 882 (998)
++||+++++++++|||||||+|.+.++++|+.|.|+.+++..+ +++|||||||..... ..+|.+| .||.| +.|
T Consensus 183 ~~LPlaaii~~~il~VHGGlsP~~~sld~I~~I~R~~e~p~~g-~~~DLLWSDP~~~~g~~~~~~~f~~ns~RG~g-~~F 260 (521)
T 1aui_A 183 DCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG-PMCDILWSDPLEDFGNEKTQEHFTHNTVRGCS-YFY 260 (521)
T ss_dssp TTSCCEEEETTTEEEESSCCCTTCCSHHHHHHSCCSSSCCSSS-HHHHHHHCEECTTTTSCSSCCCEEECTTTTSS-EEE
T ss_pred HhCCceEEecCCceEECCCcCcccCCHHHhhhccCCcCCCccc-hhhhheecCccccccccccCcceecccCCCcc-ccc
Confidence 9999999999999999999999999999999999999887665 899999999986421 2568887 79999 689
Q ss_pred CHHHHHHHHHHcCCcEEEEcccccccceEEecCC------eEEEEeccccccCCCCCeEEEEEEcCCceEEeEEeccCCC
Q 001901 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQG------HLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPP 956 (998)
Q Consensus 883 g~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~------~~iTvfSa~~y~~~~~n~ga~l~~~~~~~~~~~~~~~~~~ 956 (998)
|++++++||++||+++||||||++++||++++++ +|||||||||||+.++|+||||.|+++ .+.++.|.+.+.
T Consensus 261 G~d~v~~FL~~n~l~lIIRaHq~v~~Gy~~~~~~~~~g~~kliTVFSApNYc~~~~N~gAvl~i~~~-~~~~~~f~~~~~ 339 (521)
T 1aui_A 261 SYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENN-VMNIRQFNCSPH 339 (521)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSCCTTSEEECCBCTTTSSBSEEEECCCSSGGGTSCCCEEEEEEETT-EEEEEEECCCCC
T ss_pred CHHHHHHHHHHcCCcEEEEccchhccceeeecCCcCCCCCeEEEEeCCcccCCCCCceEEEEEEeCC-cceEEEecCCCC
Confidence 9999999999999999999999999999999987 599999999999999999999999998 588999988776
Q ss_pred CCCC
Q 001901 957 AISS 960 (998)
Q Consensus 957 ~~~~ 960 (998)
.+..
T Consensus 340 p~~~ 343 (521)
T 1aui_A 340 PYWL 343 (521)
T ss_dssp CCCC
T ss_pred CCcC
Confidence 5543
No 8
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=100.00 E-value=4.9e-58 Score=543.55 Aligned_cols=293 Identities=32% Similarity=0.596 Sum_probs=269.7
Q ss_pred hhHHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCC----eEEEecCCCCHHHHHHHHHHcC
Q 001901 646 SVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAP----IKIFGDLHGQFGDLMRLFDEYG 721 (998)
Q Consensus 646 ~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ep~~l~~~~~----i~vvGDiHG~~~dL~~il~~~g 721 (998)
..++.+++.+.+.+ .+++.++..||.++.++|.+||++++++.| ++||||||||+.+|+++|+..|
T Consensus 167 ~~l~~lie~l~~~~----------~l~e~~v~~L~~~a~eil~~e~~~~~~~~~~~~~~~vigDiHG~~~~l~~~l~~~~ 236 (477)
T 1wao_1 167 SFMKELMQWYKDQK----------KLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNG 236 (477)
T ss_dssp HHHHHHHHHHHTCC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCCSSCEEEEECBCTTCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHccCCCeEEeecCCCcceEEEeCCCCCHHHHHHHHHHcC
Confidence 34678888887542 478999999999999999999999999877 9999999999999999999999
Q ss_pred CCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccchhhhcCChHHHHHHhCCCcchhhhh
Q 001901 722 SPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWH 801 (998)
Q Consensus 722 ~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~ 801 (998)
.++... .|||||||||||++|+||+.+|++||++||.+|++||||||.+.++..|||..||.++|+. .+|.
T Consensus 237 ~~~~~~-----~~v~lGD~vdrG~~s~e~~~~l~~l~~~~~~~~~~lrGNHE~~~~~~~~g~~~~~~~~~~~----~~~~ 307 (477)
T 1wao_1 237 LPSETN-----PYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTA----QMYE 307 (477)
T ss_dssp CCBTTB-----CEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHSCT----THHH
T ss_pred CCCCcC-----eEEEeccccCCCcchHHHHHHHHHHHhhCCCceEeecCCccHHHHhhhcChHHHHHHHhhH----HHHH
Confidence 886541 5999999999999999999999999999999999999999999999999999999999975 5999
Q ss_pred hhhhhhcccceeEEEcCeEEEecCCc-cCcccCHHhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCCce
Q 001901 802 RINRLFNWLPLAALIEKKIICMHGGI-GRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLV 880 (998)
Q Consensus 802 ~~~~~f~~LP~aa~i~~~il~vHgGi-~~~~~~~~~i~~i~rp~~~~~~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~ 880 (998)
.+.++|++||++++++++|||||||| ++...++++|+.+.|+.+++..+ +++|+|||||.. ..+|.++.||.| +
T Consensus 308 ~~~~~~~~lp~~~~~~~~~~~vHgg~~~~~~~~l~~i~~~~r~~~~~~~~-~~~dllWsdp~~---~~~~~~~~rg~~-~ 382 (477)
T 1wao_1 308 LFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG-PMCDLLWSDPQP---QNGRSISKRGVS-C 382 (477)
T ss_dssp HHHHHHTTSCSEEEETTTEEECSSCCCSSSCCCHHHHHTCCCSSCCCSSS-HHHHHHHCEECS---SSSCEECTTSSS-E
T ss_pred HHHHHhccCCcEEEEcCcEEEECCCCCccccCCHHHHHhccCCCCCchhh-hhhhhccCCCCc---cCCcCcCCCCCc-e
Confidence 99999999999999999999999999 77888999999999998887654 899999999985 468999999999 5
Q ss_pred eeCHHHHHHHHHHcCCcEEEEcccccccceEEecCCeEEEEeccccccCCCCCeEEEEEE-cCCceEEeEEeccCCCCCC
Q 001901 881 TFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVL-GRDLVVVPKLIHPLPPAIS 959 (998)
Q Consensus 881 ~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~~-~~~~~~~~~~~~~~~~~~~ 959 (998)
.||++++++||++||+++||||||++++||+++++++|||||||||||+.++|+||||.| ++++.+.++.|.+.+....
T Consensus 383 ~fg~~~~~~fl~~~~~~~iir~H~~~~~g~~~~~~~~~~tvfsa~~y~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (477)
T 1wao_1 383 QFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHPNV 462 (477)
T ss_dssp EECHHHHHHHHHHTTCCEEEECCSCCTEEEEEEGGGTEEEEBCCTTTTSSSCCEEEEEEEETTEEEEEEEEECCCCCCSC
T ss_pred eECHHHHHHHHHHcCCeEEEECCCCCcCCeEEecCCeEEEEeCCcccccCCCccEEEEEEECCCCeEEEEEEeCCCCCCC
Confidence 899999999999999999999999999999999999999999999999999999999999 7889999999998876554
Q ss_pred CCC
Q 001901 960 SPE 962 (998)
Q Consensus 960 ~~~ 962 (998)
.|.
T Consensus 463 ~~~ 465 (477)
T 1wao_1 463 KPM 465 (477)
T ss_dssp CTT
T ss_pred Chh
Confidence 443
No 9
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=5.4e-38 Score=349.77 Aligned_cols=280 Identities=19% Similarity=0.315 Sum_probs=231.1
Q ss_pred ccCCCCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEE
Q 001901 84 KKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWS 163 (998)
Q Consensus 84 ~~g~~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~ 163 (998)
..+..|.+|.+|+++.+ +++||+|||. ... .++++++||+.+++|+
T Consensus 7 ~~~~~~~~~~~~~~~~~------------~~~i~v~GG~-~~~---------------------~~~~~~~~d~~~~~W~ 52 (308)
T 1zgk_A 7 HHHSSGLVPRGSHAPKV------------GRLIYTAGGY-FRQ---------------------SLSYLEAYNPSNGTWL 52 (308)
T ss_dssp --------------CCC------------CCCEEEECCB-SSS---------------------BCCCEEEEETTTTEEE
T ss_pred ccccCCeeeCCccccCC------------CCEEEEEeCc-CCC---------------------CcceEEEEcCCCCeEe
Confidence 44567889999999998 7899999998 211 7789999999999999
Q ss_pred EecCCCCCCCCccceEEEEeCCEEEEEeCCC---CCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcE
Q 001901 164 RITPFGEPPTPRAAHVATAVGTMVVIQGGIG---PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRY 240 (998)
Q Consensus 164 ~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~---~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~ 240 (998)
.+..+ |.+|.+|++++++++|||+||.. ......+++++||+.++ +|+.++ ++|.+|..|+++++++ +
T Consensus 53 ~~~~~---p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~--~W~~~~---~~p~~r~~~~~~~~~~-~ 123 (308)
T 1zgk_A 53 RLADL---QVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTN--QWSPCA---PMSVPRNRIGVGVIDG-H 123 (308)
T ss_dssp ECCCC---SSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTT--EEEECC---CCSSCCBTCEEEEETT-E
T ss_pred ECCCC---CcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCC--eEeECC---CCCcCccccEEEEECC-E
Confidence 99765 89999999999999999999974 33446789999999987 599997 8999999999999987 8
Q ss_pred EEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCe
Q 001901 241 LMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGR 320 (998)
Q Consensus 241 Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~ 320 (998)
||++||.++...++++|+||+.++ +|+.+.++ |.+|..|++++. +++||++||.+... .+++++.|++.++
T Consensus 124 iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~~~~-~~~iyv~GG~~~~~-~~~~~~~yd~~~~-- 194 (308)
T 1zgk_A 124 IYAVGGSHGCIHHNSVERYEPERD--EWHLVAPM---LTRRIGVGVAVL-NRLLYAVGGFDGTN-RLNSAECYYPERN-- 194 (308)
T ss_dssp EEEECCEETTEECCCEEEEETTTT--EEEECCCC---SSCCBSCEEEEE-TTEEEEECCBCSSC-BCCCEEEEETTTT--
T ss_pred EEEEcCCCCCcccccEEEECCCCC--eEeECCCC---CccccceEEEEE-CCEEEEEeCCCCCC-cCceEEEEeCCCC--
Confidence 999999988888999999999999 99999764 455666665554 99999999998766 4899999999887
Q ss_pred EEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCc
Q 001901 321 WEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAA 400 (998)
Q Consensus 321 W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~ 400 (998)
+|..++.+ |.+|..|++++++++|||+||.+... ..+++++||+++++|+.+..+
T Consensus 195 -~W~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~------------------- 249 (308)
T 1zgk_A 195 -EWRMITAM-NTIRSGAGVCVLHNCIYAAGGYDGQD----QLNSVERYDVETETWTFVAPM------------------- 249 (308)
T ss_dssp -EEEECCCC-SSCCBSCEEEEETTEEEEECCBCSSS----BCCCEEEEETTTTEEEECCCC-------------------
T ss_pred -eEeeCCCC-CCccccceEEEECCEEEEEeCCCCCC----ccceEEEEeCCCCcEEECCCC-------------------
Confidence 66677654 78999999999999999999987543 278999999999999999866
Q ss_pred cCCCCcceeEEEEECCEEEEEcCCCCCCCcccEEEecccccc
Q 001901 401 VELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAA 442 (998)
Q Consensus 401 ~~p~~R~~hsa~~~~~~LyVfGG~~~~~~l~Dv~~ld~~~~~ 442 (998)
|.+|..|++++++++|||+||+++...++|++++|.....
T Consensus 250 --p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 250 --KHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp --SSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred --CCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 6689999999999999999999888889999999976543
No 10
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=6.9e-36 Score=331.23 Aligned_cols=263 Identities=23% Similarity=0.363 Sum_probs=226.1
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeC
Q 001901 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (998)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG 192 (998)
+++||+|||.... ..+++++||+.+++|+.+..+ |.+|.+|++++++++|||+||
T Consensus 15 ~~~i~v~GG~~~~----------------------~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~~~lyv~GG 69 (302)
T 2xn4_A 15 PKLMVVVGGQAPK----------------------AIRSVECYDFKEERWHQVAEL---PSRRCRAGMVYMAGLVFAVGG 69 (302)
T ss_dssp CEEEEEECCBSSS----------------------BCCCEEEEETTTTEEEEECCC---SSCCBSCEEEEETTEEEEESC
T ss_pred CCEEEEECCCCCC----------------------CCCcEEEEcCcCCcEeEcccC---CcccccceEEEECCEEEEEeC
Confidence 6799999997531 567999999999999999765 889999999999999999999
Q ss_pred CCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcc
Q 001901 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (998)
Q Consensus 193 ~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~ 272 (998)
.... ...+++++||+.++ +|+.++ ++|.+|+.|+++++++ +||++||.++...++++|+||+.++ +|+.+.
T Consensus 70 ~~~~-~~~~~~~~~d~~~~--~W~~~~---~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~d~~~~--~W~~~~ 140 (302)
T 2xn4_A 70 FNGS-LRVRTVDSYDPVKD--QWTSVA---NMRDRRSTLGAAVLNG-LLYAVGGFDGSTGLSSVEAYNIKSN--EWFHVA 140 (302)
T ss_dssp BCSS-SBCCCEEEEETTTT--EEEEEC---CCSSCCBSCEEEEETT-EEEEEEEECSSCEEEEEEEEETTTT--EEEEEC
T ss_pred cCCC-ccccceEEECCCCC--ceeeCC---CCCccccceEEEEECC-EEEEEcCCCCCccCceEEEEeCCCC--eEeecC
Confidence 8643 45789999999987 599998 8999999999999987 8999999988888999999999999 999997
Q ss_pred cCCCCCCCccceEEEEEeCCEEEEEeccCCCC-CCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcc
Q 001901 273 PEGEGPPPCMYATASARSDGLLLLCGGRDASS-VPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGG 351 (998)
Q Consensus 273 ~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~-~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG 351 (998)
++ |.+|..|+++ +.+++||++||.+... ..+++++.|++.++ +|..++.+ |.+|..|++++++++|||+||
T Consensus 141 ~~---p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~---~W~~~~~~-p~~r~~~~~~~~~~~iyv~GG 212 (302)
T 2xn4_A 141 PM---NTRRSSVGVG-VVGGLLYAVGGYDVASRQCLSTVECYNATTN---EWTYIAEM-STRRSGAGVGVLNNLLYAVGG 212 (302)
T ss_dssp CC---SSCCBSCEEE-EETTEEEEECCEETTTTEECCCEEEEETTTT---EEEEECCC-SSCCBSCEEEEETTEEEEECC
T ss_pred CC---CCcccCceEE-EECCEEEEEeCCCCCCCccccEEEEEeCCCC---cEEECCCC-ccccccccEEEECCEEEEECC
Confidence 65 4456666554 4599999999986654 35789999999877 55555554 789999999999999999999
Q ss_pred cCCCCCccccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCCCCCcc
Q 001901 352 ALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLD 431 (998)
Q Consensus 352 ~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyVfGG~~~~~~l~ 431 (998)
.++.. ..+++++||+++++|+.+..+ |.+|..|+++.++++|||+||.++...++
T Consensus 213 ~~~~~----~~~~~~~yd~~~~~W~~~~~~---------------------~~~r~~~~~~~~~~~i~v~GG~~~~~~~~ 267 (302)
T 2xn4_A 213 HDGPL----VRKSVEVYDPTTNAWRQVADM---------------------NMCRRNAGVCAVNGLLYVVGGDDGSCNLA 267 (302)
T ss_dssp BSSSS----BCCCEEEEETTTTEEEEECCC---------------------SSCCBSCEEEEETTEEEEECCBCSSSBCC
T ss_pred CCCCc----ccceEEEEeCCCCCEeeCCCC---------------------CCccccCeEEEECCEEEEECCcCCCcccc
Confidence 87543 368899999999999999876 56899999999999999999998888899
Q ss_pred cEEEecccccc
Q 001901 432 DLLVAEDLAAA 442 (998)
Q Consensus 432 Dv~~ld~~~~~ 442 (998)
+++++|.....
T Consensus 268 ~v~~yd~~~~~ 278 (302)
T 2xn4_A 268 SVEYYNPTTDK 278 (302)
T ss_dssp CEEEEETTTTE
T ss_pred cEEEEcCCCCe
Confidence 99999976543
No 11
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=2e-36 Score=343.65 Aligned_cols=280 Identities=18% Similarity=0.220 Sum_probs=222.9
Q ss_pred CCCCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECC--CCcEE
Q 001901 86 EDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVL--TNKWS 163 (998)
Q Consensus 86 g~~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~--t~~W~ 163 (998)
...|.+|.+|+++++ +++||||||.. .+++|+||+. +++|+
T Consensus 4 ~~lP~~r~~~~~~~~------------~~~iyv~GG~~-------------------------~~~~~~~d~~~~~~~W~ 46 (357)
T 2uvk_A 4 PETPVPFKSGTGAID------------NDTVYIGLGSA-------------------------GTAWYKLDTQAKDKKWT 46 (357)
T ss_dssp CCCSSCCCSCEEEEE------------TTEEEEECGGG-------------------------TTCEEEEETTSSSCCEE
T ss_pred CCCCccccceEEEEE------------CCEEEEEeCcC-------------------------CCeEEEEccccCCCCee
Confidence 467999999999998 79999999963 2489999998 49999
Q ss_pred EecCCCCCC-CCccceEEEEeCCEEEEEeCCC----CCCCCcccEEEEEcCCCCCceEEeeecCCCC-CCCcccEEEEEC
Q 001901 164 RITPFGEPP-TPRAAHVATAVGTMVVIQGGIG----PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP-GPRYGHVMALVG 237 (998)
Q Consensus 164 ~l~~~g~~P-~pR~~hsa~~~~~~lyVfGG~~----~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P-~~R~~hs~~~~~ 237 (998)
.++.+ | .+|.+|++++++++||||||.. .....++++|+||+.++ +|+.+. +++ .+|++|++++++
T Consensus 47 ~~~~~---p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~--~W~~~~---~~~p~~r~~~~~~~~~ 118 (357)
T 2uvk_A 47 ALAAF---PGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN--SWVKLM---SHAPMGMAGHVTFVHN 118 (357)
T ss_dssp ECCCC---TTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTT--EEEECS---CCCSSCCSSEEEEEET
T ss_pred ECCCC---CCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCC--cEEECC---CCCCcccccceEEEEC
Confidence 99886 6 8999999999999999999982 23346799999999997 599998 444 999999999988
Q ss_pred CcEEEEEcCCCCC----------------------------------CCcccEEEEECCCCCceEEEcccCCCCCCCccc
Q 001901 238 QRYLMAIGGNDGK----------------------------------RPLADVWALDTAAKPYEWRKLEPEGEGPPPCMY 283 (998)
Q Consensus 238 ~~~Lyv~GG~~g~----------------------------------~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~ 283 (998)
+ +||||||.++. ..++++++||+.++ +|+.+.++ |.+++.
T Consensus 119 ~-~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~--~W~~~~~~---p~~~~~ 192 (357)
T 2uvk_A 119 G-KAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQ--QWSYAGES---PWYGTA 192 (357)
T ss_dssp T-EEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTT--EEEEEEEC---SSCCCB
T ss_pred C-EEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCC--cEEECCCC---CCCCcc
Confidence 7 89999998754 25789999999999 99999664 444666
Q ss_pred eEEEEEeCCEEEEEeccCCCCCCcccEEEEec--CCCCeEEEEECCCC-CCCCcceeEEEEECCEEEEEcccCCCCC---
Q 001901 284 ATASARSDGLLLLCGGRDASSVPLASAYGLAK--HRDGRWEWAIAPGV-SPSPRYQHAAVFVNARLHVSGGALGGGR--- 357 (998)
Q Consensus 284 ~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~--~~~~~W~w~~~~g~-~P~pR~~hsav~~~~~L~V~GG~~~~~~--- 357 (998)
++++++.+++||||||.+......++++.|+. .++ +|..+..+ .|.+|..|++++++++|||+||.+..+.
T Consensus 193 ~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~---~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~ 269 (357)
T 2uvk_A 193 GAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNL---KWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSREN 269 (357)
T ss_dssp SCEEEEETTEEEEECCEEETTEECCCEEEEECC---C---EEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHH
T ss_pred cccEEEECCEEEEEeeecCCCcccCceEEEEecCCCC---cEEecCCCCCCcccccceEEEECCEEEEEcCccccCCccc
Confidence 56666679999999998766556788988875 444 55566554 2445778999999999999999754321
Q ss_pred ----------ccccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCCC
Q 001901 358 ----------MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGG 427 (998)
Q Consensus 358 ----------~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyVfGG~~~~ 427 (998)
.....+++++||+++++|+++..+ |.+|+.|++++++++||||||++..
T Consensus 270 ~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~---------------------p~~r~~~~~~~~~~~i~v~GG~~~~ 328 (357)
T 2uvk_A 270 YQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGEL---------------------SQGRAYGVSLPWNNSLLIIGGETAG 328 (357)
T ss_dssp HHTTCSSTTTTCCCEECCEEEECC---CEEEEEC---------------------SSCCBSSEEEEETTEEEEEEEECGG
T ss_pred ccccceeccccccceeeEEEEecCCCceeeCCCC---------------------CCCcccceeEEeCCEEEEEeeeCCC
Confidence 011246799999999999999876 6699999999999999999998764
Q ss_pred -CCcccEEEecccc
Q 001901 428 -VLLDDLLVAEDLA 440 (998)
Q Consensus 428 -~~l~Dv~~ld~~~ 440 (998)
..++|++.++...
T Consensus 329 ~~~~~~v~~l~~~~ 342 (357)
T 2uvk_A 329 GKAVTDSVLITVKD 342 (357)
T ss_dssp GCEEEEEEEEEC-C
T ss_pred CCEeeeEEEEEEcC
Confidence 4589999887654
No 12
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.7e-35 Score=327.70 Aligned_cols=264 Identities=21% Similarity=0.323 Sum_probs=226.1
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeC
Q 001901 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (998)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG 192 (998)
+++||+|||...... ..+++++||+.+++|+.++.+ |.+|.+|++++++++|||+||
T Consensus 14 ~~~i~~~GG~~~~~~--------------------~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~~~l~v~GG 70 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQS--------------------PIDVVEKYDPKTQEWSFLPSI---TRKRRYVASVSLHDRIYVIGG 70 (301)
T ss_dssp CEEEEEECCEETTTE--------------------ECCCEEEEETTTTEEEECCCC---SSCCBSCEEEEETTEEEEECC
T ss_pred CCEEEEEeCccCCCc--------------------ceeEEEEEcCCCCeEEeCCCC---ChhhccccEEEECCEEEEEcC
Confidence 689999999432221 788999999999999999865 889999999999999999999
Q ss_pred CCCCCCCcccEEEEEcCCCC-CceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEc
Q 001901 193 IGPAGLSAEDLHVLDLTQQR-PRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKL 271 (998)
Q Consensus 193 ~~~~~~~~~dv~~~Dl~t~t-~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v 271 (998)
.. .....+++++||+.+++ .+|+.+. ++|.+|..|+++++++ +||++||.++...++++|+||+.++ +|+.+
T Consensus 71 ~~-~~~~~~~~~~~d~~~~~~~~W~~~~---~~p~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~d~~~~--~W~~~ 143 (301)
T 2vpj_A 71 YD-GRSRLSSVECLDYTADEDGVWYSVA---PMNVRRGLAGATTLGD-MIYVSGGFDGSRRHTSMERYDPNID--QWSML 143 (301)
T ss_dssp BC-SSCBCCCEEEEETTCCTTCCCEEEC---CCSSCCBSCEEEEETT-EEEEECCBCSSCBCCEEEEEETTTT--EEEEE
T ss_pred CC-CCccCceEEEEECCCCCCCeeEECC---CCCCCccceeEEEECC-EEEEEcccCCCcccceEEEEcCCCC--eEEEC
Confidence 86 34567899999999862 1299996 8999999999999987 8999999998888999999999999 99999
Q ss_pred ccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcc
Q 001901 272 EPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGG 351 (998)
Q Consensus 272 ~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG 351 (998)
.++ |.+|..|++++ .+++||++||.++.. .+++++.|++.++ +|..++.+ |.+|..|+++.++++|||+||
T Consensus 144 ~~~---p~~r~~~~~~~-~~~~iyv~GG~~~~~-~~~~~~~~d~~~~---~W~~~~~~-p~~r~~~~~~~~~~~i~v~GG 214 (301)
T 2vpj_A 144 GDM---QTAREGAGLVV-ASGVIYCLGGYDGLN-ILNSVEKYDPHTG---HWTNVTPM-ATKRSGAGVALLNDHIYVVGG 214 (301)
T ss_dssp EEC---SSCCBSCEEEE-ETTEEEEECCBCSSC-BCCCEEEEETTTT---EEEEECCC-SSCCBSCEEEEETTEEEEECC
T ss_pred CCC---CCCcccceEEE-ECCEEEEECCCCCCc-ccceEEEEeCCCC---cEEeCCCC-CcccccceEEEECCEEEEEeC
Confidence 765 44566665554 599999999987765 6899999999877 55555544 789999999999999999999
Q ss_pred cCCCCCccccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCCCCCcc
Q 001901 352 ALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLD 431 (998)
Q Consensus 352 ~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyVfGG~~~~~~l~ 431 (998)
.+... ..+++++||+++++|+.+..+ |.+|..|++++++++|||+||+++...++
T Consensus 215 ~~~~~----~~~~v~~yd~~~~~W~~~~~~---------------------p~~r~~~~~~~~~~~i~v~GG~~~~~~~~ 269 (301)
T 2vpj_A 215 FDGTA----HLSSVEAYNIRTDSWTTVTSM---------------------TTPRCYVGATVLRGRLYAIAGYDGNSLLS 269 (301)
T ss_dssp BCSSS----BCCCEEEEETTTTEEEEECCC---------------------SSCCBSCEEEEETTEEEEECCBCSSSBEE
T ss_pred CCCCc----ccceEEEEeCCCCcEEECCCC---------------------CCcccceeEEEECCEEEEEcCcCCCcccc
Confidence 87643 278999999999999999766 66899999999999999999998888889
Q ss_pred cEEEecccc
Q 001901 432 DLLVAEDLA 440 (998)
Q Consensus 432 Dv~~ld~~~ 440 (998)
+++++|...
T Consensus 270 ~v~~yd~~~ 278 (301)
T 2vpj_A 270 SIECYDPII 278 (301)
T ss_dssp EEEEEETTT
T ss_pred cEEEEcCCC
Confidence 999999755
No 13
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.4e-35 Score=329.38 Aligned_cols=260 Identities=19% Similarity=0.297 Sum_probs=225.5
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeC
Q 001901 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (998)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG 192 (998)
.+.||+|||... .+++++||+.+++|+.+..+ |.+|.+|++++++++|||+||
T Consensus 11 ~~~l~~~GG~~~------------------------~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~~~lyv~GG 63 (306)
T 3ii7_A 11 HDYRIALFGGSQ------------------------PQSCRYFNPKDYSWTDIRCP---FEKRRDAACVFWDNVVYILGG 63 (306)
T ss_dssp CCEEEEEECCSS------------------------TTSEEEEETTTTEEEECCCC---SCCCBSCEEEEETTEEEEECC
T ss_pred cceEEEEeCCCC------------------------CceEEEecCCCCCEecCCCC---CcccceeEEEEECCEEEEEeC
Confidence 478999999642 46999999999999999776 899999999999999999999
Q ss_pred CCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCC-CCCCcccEEEEECCCCCceEEEc
Q 001901 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGND-GKRPLADVWALDTAAKPYEWRKL 271 (998)
Q Consensus 193 ~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~-g~~~lndv~~yD~~s~~~~W~~v 271 (998)
.. ....+++++||+.++ +|+.+. ++|.+|++|+++++++ +||++||.+ +...++++|+||+.++ +|+.+
T Consensus 64 ~~--~~~~~~~~~~d~~~~--~W~~~~---~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~d~~~~--~W~~~ 133 (306)
T 3ii7_A 64 SQ--LFPIKRMDCYNVVKD--SWYSKL---GPPTPRDSLAACAAEG-KIYTSGGSEVGNSALYLFECYDTRTE--SWHTK 133 (306)
T ss_dssp BS--SSBCCEEEEEETTTT--EEEEEE---CCSSCCBSCEEEEETT-EEEEECCBBTTBSCCCCEEEEETTTT--EEEEE
T ss_pred CC--CCCcceEEEEeCCCC--eEEECC---CCCccccceeEEEECC-EEEEECCCCCCCcEeeeEEEEeCCCC--ceEeC
Confidence 86 567799999999997 599997 8999999999999987 899999997 6677999999999999 99999
Q ss_pred ccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCC---cccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEE
Q 001901 272 EPEGEGPPPCMYATASARSDGLLLLCGGRDASSVP---LASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHV 348 (998)
Q Consensus 272 ~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~---~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V 348 (998)
.++ |.+|..|+++ ..+++||++||.+..... +++++.|++.++ +|..++.+ |.+|..|++++++++|||
T Consensus 134 ~~~---p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~---~W~~~~~~-p~~r~~~~~~~~~~~i~v 205 (306)
T 3ii7_A 134 PSM---LTQRCSHGMV-EANGLIYVCGGSLGNNVSGRVLNSCEVYDPATE---TWTELCPM-IEARKNHGLVFVKDKIFA 205 (306)
T ss_dssp CCC---SSCCBSCEEE-EETTEEEEECCEESCTTTCEECCCEEEEETTTT---EEEEECCC-SSCCBSCEEEEETTEEEE
T ss_pred CCC---cCCcceeEEE-EECCEEEEECCCCCCCCcccccceEEEeCCCCC---eEEECCCc-cchhhcceEEEECCEEEE
Confidence 665 4456666555 459999999998766533 899999999987 56666654 789999999999999999
Q ss_pred EcccCCCCCccccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCCCC
Q 001901 349 SGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGV 428 (998)
Q Consensus 349 ~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyVfGG~~~~~ 428 (998)
+||.+... ..+++++||+.+++|+.+..+ |.+|..|++++++++|||+||+++..
T Consensus 206 ~GG~~~~~----~~~~~~~yd~~~~~W~~~~~~---------------------p~~r~~~~~~~~~~~i~v~GG~~~~~ 260 (306)
T 3ii7_A 206 VGGQNGLG----GLDNVEYYDIKLNEWKMVSPM---------------------PWKGVTVKCAAVGSIVYVLAGFQGVG 260 (306)
T ss_dssp ECCEETTE----EBCCEEEEETTTTEEEECCCC---------------------SCCBSCCEEEEETTEEEEEECBCSSS
T ss_pred EeCCCCCC----CCceEEEeeCCCCcEEECCCC---------------------CCCccceeEEEECCEEEEEeCcCCCe
Confidence 99987652 368899999999999999876 66999999999999999999998888
Q ss_pred CcccEEEecccccc
Q 001901 429 LLDDLLVAEDLAAA 442 (998)
Q Consensus 429 ~l~Dv~~ld~~~~~ 442 (998)
.+++++++|.....
T Consensus 261 ~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 261 RLGHILEYNTETDK 274 (306)
T ss_dssp BCCEEEEEETTTTE
T ss_pred eeeeEEEEcCCCCe
Confidence 89999999976644
No 14
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.2e-34 Score=321.21 Aligned_cols=257 Identities=19% Similarity=0.306 Sum_probs=217.5
Q ss_pred cccCCCCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcE
Q 001901 83 EKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKW 162 (998)
Q Consensus 83 ~~~g~~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W 162 (998)
......|.+|++|+++.+ +++||||||..... .++++++||+.+++|
T Consensus 43 ~~~~~~p~~r~~~~~~~~------------~~~lyv~GG~~~~~---------------------~~~~~~~~d~~~~~W 89 (302)
T 2xn4_A 43 HQVAELPSRRCRAGMVYM------------AGLVFAVGGFNGSL---------------------RVRTVDSYDPVKDQW 89 (302)
T ss_dssp EEECCCSSCCBSCEEEEE------------TTEEEEESCBCSSS---------------------BCCCEEEEETTTTEE
T ss_pred eEcccCCcccccceEEEE------------CCEEEEEeCcCCCc---------------------cccceEEECCCCCce
Confidence 344578999999999998 78999999986432 678999999999999
Q ss_pred EEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEE
Q 001901 163 SRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLM 242 (998)
Q Consensus 163 ~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Ly 242 (998)
+.++.+ |.+|.+|++++++++|||+||... ...++++++||+.++ +|+.+. ++|.+|+.|+++++++ +||
T Consensus 90 ~~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~~d~~~~--~W~~~~---~~p~~r~~~~~~~~~~-~iy 159 (302)
T 2xn4_A 90 TSVANM---RDRRSTLGAAVLNGLLYAVGGFDG-STGLSSVEAYNIKSN--EWFHVA---PMNTRRSSVGVGVVGG-LLY 159 (302)
T ss_dssp EEECCC---SSCCBSCEEEEETTEEEEEEEECS-SCEEEEEEEEETTTT--EEEEEC---CCSSCCBSCEEEEETT-EEE
T ss_pred eeCCCC---CccccceEEEEECCEEEEEcCCCC-CccCceEEEEeCCCC--eEeecC---CCCCcccCceEEEECC-EEE
Confidence 999876 899999999999999999999854 345789999999987 599997 8899999999999988 899
Q ss_pred EEcCCCCCC--CcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCe
Q 001901 243 AIGGNDGKR--PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGR 320 (998)
Q Consensus 243 v~GG~~g~~--~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~ 320 (998)
++||.++.. .++++++||+.++ +|+.+.++ |.+|..|++ ++.+++||++||.++.. .+++++.|++.++
T Consensus 160 v~GG~~~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~-~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~-- 230 (302)
T 2xn4_A 160 AVGGYDVASRQCLSTVECYNATTN--EWTYIAEM---STRRSGAGV-GVLNNLLYAVGGHDGPL-VRKSVEVYDPTTN-- 230 (302)
T ss_dssp EECCEETTTTEECCCEEEEETTTT--EEEEECCC---SSCCBSCEE-EEETTEEEEECCBSSSS-BCCCEEEEETTTT--
T ss_pred EEeCCCCCCCccccEEEEEeCCCC--cEEECCCC---ccccccccE-EEECCEEEEECCCCCCc-ccceEEEEeCCCC--
Confidence 999997653 5899999999999 99999754 445666654 45599999999987654 5789999999877
Q ss_pred EEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcc-cCcCCCCCCCCccccCCCCC
Q 001901 321 WEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTK-SVVTSPRTGRYSADAAGGDA 399 (998)
Q Consensus 321 W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~-~~~~~p~~~~~~~~~~~~~~ 399 (998)
+|..+..+ |.+|..|+++.++++|||+||.++.. ..+++++||+++++|+.++ .+
T Consensus 231 -~W~~~~~~-~~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~~------------------ 286 (302)
T 2xn4_A 231 -AWRQVADM-NMCRRNAGVCAVNGLLYVVGGDDGSC----NLASVEYYNPTTDKWTVVSSCM------------------ 286 (302)
T ss_dssp -EEEEECCC-SSCCBSCEEEEETTEEEEECCBCSSS----BCCCEEEEETTTTEEEECSSCC------------------
T ss_pred -CEeeCCCC-CCccccCeEEEECCEEEEECCcCCCc----ccccEEEEcCCCCeEEECCccc------------------
Confidence 55566554 68899999999999999999987543 3788999999999999987 44
Q ss_pred ccCCCCcceeEEEEECCEE
Q 001901 400 AVELTRRCRHAAAAVGDLI 418 (998)
Q Consensus 400 ~~~p~~R~~hsa~~~~~~L 418 (998)
+.+|+.|++++++++|
T Consensus 287 ---~~~r~~~~~~~~~~~i 302 (302)
T 2xn4_A 287 ---STGRSYAGVTVIDKRL 302 (302)
T ss_dssp ---SSCCBSCEEEEEEC--
T ss_pred ---CcccccceEEEecccC
Confidence 6699999999998765
No 15
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.3e-34 Score=321.59 Aligned_cols=256 Identities=18% Similarity=0.236 Sum_probs=221.2
Q ss_pred ecccCCCCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCc
Q 001901 82 IEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNK 161 (998)
Q Consensus 82 ~~~~g~~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~ 161 (998)
+......|.+|.+|+++++ +++||||||.. .. .++++++||+.+++
T Consensus 36 W~~~~~~p~~r~~~~~~~~------------~~~lyv~GG~~-~~---------------------~~~~~~~~d~~~~~ 81 (306)
T 3ii7_A 36 WTDIRCPFEKRRDAACVFW------------DNVVYILGGSQ-LF---------------------PIKRMDCYNVVKDS 81 (306)
T ss_dssp EEECCCCSCCCBSCEEEEE------------TTEEEEECCBS-SS---------------------BCCEEEEEETTTTE
T ss_pred EecCCCCCcccceeEEEEE------------CCEEEEEeCCC-CC---------------------CcceEEEEeCCCCe
Confidence 4455678999999999998 78999999987 21 78899999999999
Q ss_pred EEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEE
Q 001901 162 WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYL 241 (998)
Q Consensus 162 W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~L 241 (998)
|+.+..+ |.+|.+|++++++++|||+||.+.....++++++||+.++ +|+.+. ++|.+|+.|+++.+++ +|
T Consensus 82 W~~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~--~W~~~~---~~p~~r~~~~~~~~~~-~i 152 (306)
T 3ii7_A 82 WYSKLGP---PTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTE--SWHTKP---SMLTQRCSHGMVEANG-LI 152 (306)
T ss_dssp EEEEECC---SSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTT--EEEEEC---CCSSCCBSCEEEEETT-EE
T ss_pred EEECCCC---CccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCC--ceEeCC---CCcCCcceeEEEEECC-EE
Confidence 9999876 8999999999999999999998756667899999999987 599986 8999999999999988 89
Q ss_pred EEEcCCCCCCC----cccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCC
Q 001901 242 MAIGGNDGKRP----LADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHR 317 (998)
Q Consensus 242 yv~GG~~g~~~----lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~ 317 (998)
|++||.++... ++++|+||+.++ +|+.+.++ |.+|..|.+++. +++||++||.+... .+++++.|++.+
T Consensus 153 yv~GG~~~~~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~~~~-~~~i~v~GG~~~~~-~~~~~~~yd~~~ 225 (306)
T 3ii7_A 153 YVCGGSLGNNVSGRVLNSCEVYDPATE--TWTELCPM---IEARKNHGLVFV-KDKIFAVGGQNGLG-GLDNVEYYDIKL 225 (306)
T ss_dssp EEECCEESCTTTCEECCCEEEEETTTT--EEEEECCC---SSCCBSCEEEEE-TTEEEEECCEETTE-EBCCEEEEETTT
T ss_pred EEECCCCCCCCcccccceEEEeCCCCC--eEEECCCc---cchhhcceEEEE-CCEEEEEeCCCCCC-CCceEEEeeCCC
Confidence 99999977665 899999999999 99999764 445666655554 99999999987664 578999999998
Q ss_pred CCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCC
Q 001901 318 DGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGG 397 (998)
Q Consensus 318 ~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~ 397 (998)
+ +|..+..+ |.+|..|++++++++|||+||.++.. ..+++++||+++++|+.+..+
T Consensus 226 ~---~W~~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~~~~yd~~~~~W~~~~~~---------------- 281 (306)
T 3ii7_A 226 N---EWKMVSPM-PWKGVTVKCAAVGSIVYVLAGFQGVG----RLGHILEYNTETDKWVANSKV---------------- 281 (306)
T ss_dssp T---EEEECCCC-SCCBSCCEEEEETTEEEEEECBCSSS----BCCEEEEEETTTTEEEEEEEE----------------
T ss_pred C---cEEECCCC-CCCccceeEEEECCEEEEEeCcCCCe----eeeeEEEEcCCCCeEEeCCCc----------------
Confidence 8 67777654 78999999999999999999987653 378999999999999999877
Q ss_pred CCccCCCCcceeEEEEECC
Q 001901 398 DAAVELTRRCRHAAAAVGD 416 (998)
Q Consensus 398 ~~~~~p~~R~~hsa~~~~~ 416 (998)
|.+|.+|+++++.+
T Consensus 282 -----~~~r~~~~~~~~~~ 295 (306)
T 3ii7_A 282 -----RAFPVTSCLICVVD 295 (306)
T ss_dssp -----ECCSCTTCEEEEEE
T ss_pred -----ccccceeEEEEECC
Confidence 56899999988744
No 16
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=2.8e-34 Score=319.71 Aligned_cols=258 Identities=22% Similarity=0.336 Sum_probs=218.8
Q ss_pred ecccCCCCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCc
Q 001901 82 IEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNK 161 (998)
Q Consensus 82 ~~~~g~~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~ 161 (998)
+......|.+|.+|+++.+ +++||||||....... ...++++++||+.+++
T Consensus 51 W~~~~~~p~~r~~~~~~~~------------~~~lyv~GG~~~~~~~-----------------~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 51 WLRLADLQVPRSGLAGCVV------------GGLLYAVGGRNNSPDG-----------------NTDSSALDCYNPMTNQ 101 (308)
T ss_dssp EEECCCCSSCCBSCEEEEE------------TTEEEEECCEEEETTE-----------------EEECCCEEEEETTTTE
T ss_pred EeECCCCCcccccceEEEE------------CCEEEEECCCcCCCCC-----------------CeecceEEEECCCCCe
Confidence 3445678999999999998 7899999997411000 0167899999999999
Q ss_pred EEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEE
Q 001901 162 WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYL 241 (998)
Q Consensus 162 W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~L 241 (998)
|++++++ |.+|..|++++++++|||+||.... ..++++++||+.++ +|+.+. ++|.+|++|+++++++ +|
T Consensus 102 W~~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~~~~--~W~~~~---~~p~~r~~~~~~~~~~-~i 171 (308)
T 1zgk_A 102 WSPCAPM---SVPRNRIGVGVIDGHIYAVGGSHGC-IHHNSVERYEPERD--EWHLVA---PMLTRRIGVGVAVLNR-LL 171 (308)
T ss_dssp EEECCCC---SSCCBTCEEEEETTEEEEECCEETT-EECCCEEEEETTTT--EEEECC---CCSSCCBSCEEEEETT-EE
T ss_pred EeECCCC---CcCccccEEEEECCEEEEEcCCCCC-cccccEEEECCCCC--eEeECC---CCCccccceEEEEECC-EE
Confidence 9999876 8899999999999999999997543 45689999999987 599997 8899999999999987 89
Q ss_pred EEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeE
Q 001901 242 MAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRW 321 (998)
Q Consensus 242 yv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W 321 (998)
|++||.++...++++++||+.++ +|+.+.++ |.+|..|++++ .+++||++||.+... .+++++.|++.++
T Consensus 172 yv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~~~-~~~~iyv~GG~~~~~-~~~~v~~yd~~~~--- 241 (308)
T 1zgk_A 172 YAVGGFDGTNRLNSAECYYPERN--EWRMITAM---NTIRSGAGVCV-LHNCIYAAGGYDGQD-QLNSVERYDVETE--- 241 (308)
T ss_dssp EEECCBCSSCBCCCEEEEETTTT--EEEECCCC---SSCCBSCEEEE-ETTEEEEECCBCSSS-BCCCEEEEETTTT---
T ss_pred EEEeCCCCCCcCceEEEEeCCCC--eEeeCCCC---CCccccceEEE-ECCEEEEEeCCCCCC-ccceEEEEeCCCC---
Confidence 99999998878999999999999 99999764 45566666554 499999999998655 5899999999987
Q ss_pred EEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCcc
Q 001901 322 EWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAV 401 (998)
Q Consensus 322 ~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~ 401 (998)
+|..+..+ |.+|..|++++++++|||+||.++.. ..+++++||+++++|+.++.+
T Consensus 242 ~W~~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~-------------------- 296 (308)
T 1zgk_A 242 TWTFVAPM-KHRRSALGITVHQGRIYVLGGYDGHT----FLDSVECYDPDTDTWSEVTRM-------------------- 296 (308)
T ss_dssp EEEECCCC-SSCCBSCEEEEETTEEEEECCBCSSC----BCCEEEEEETTTTEEEEEEEC--------------------
T ss_pred cEEECCCC-CCCccceEEEEECCEEEEEcCcCCCc----ccceEEEEcCCCCEEeecCCC--------------------
Confidence 67777654 78999999999999999999987643 378999999999999999877
Q ss_pred CCCCcceeEEEEE
Q 001901 402 ELTRRCRHAAAAV 414 (998)
Q Consensus 402 ~p~~R~~hsa~~~ 414 (998)
|.+|++|+++++
T Consensus 297 -p~~r~~~~~~~l 308 (308)
T 1zgk_A 297 -TSGRSGVGVAVT 308 (308)
T ss_dssp -SSCCBSCEEEEC
T ss_pred -CCCcccceeEeC
Confidence 679999999874
No 17
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=100.00 E-value=1.6e-36 Score=342.65 Aligned_cols=242 Identities=18% Similarity=0.198 Sum_probs=190.1
Q ss_pred HhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHcCCCCCCCCc--cceeEEEeccccCCCCChHHHHHHHHHhhh---cC
Q 001901 687 FSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDI--AYIDYLFLGDYVDRGQHSLETITLLLALKV---EY 761 (998)
Q Consensus 687 ~~~ep~~l~~~~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~--~~~~~vfLGDyVDRG~~s~evl~ll~~lk~---~~ 761 (998)
|++|+++++...+++|||||||++.+|.++|+..++++....+ ....+||||||||||++|+||+.+|++|+. ++
T Consensus 60 ~~~~~~~~~~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~evl~~l~~l~~~~~~~ 139 (342)
T 2z72_A 60 KQIMPDTYLGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMYQLDQQARDA 139 (342)
T ss_dssp TSCCCSEECCCCEEEEECCCTTCHHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHHHHHHHHHHHHHHHHT
T ss_pred cccCcceecCCCCEEEEECCCCCHHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 8899999999999999999999999999999999876543211 122799999999999999999999999996 79
Q ss_pred CCcEEEeecCccccchhhhc----CChHHHHHHhCCCcchhhhhhh---hhhhcccceeEEEcCeEEEecCCccCccc--
Q 001901 762 PNNVHLIRGNHEAADINALF----GFRIECIERMGERDGIWAWHRI---NRLFNWLPLAALIEKKIICMHGGIGRSIN-- 832 (998)
Q Consensus 762 p~~v~llrGNHE~~~~~~~~----gf~~e~~~~~g~~~~~~~~~~~---~~~f~~LP~aa~i~~~il~vHgGi~~~~~-- 832 (998)
|.++++||||||.+.++..+ +.+..+.+.++.. ...+|..+ .++|+.||++++++ +++|||||++|.+.
T Consensus 140 ~~~v~~v~GNHE~~~l~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~L~~lP~~~~~~-~~~~vHgGl~p~~~~~ 217 (342)
T 2z72_A 140 GGMVHLLMGNHEQMVLGGDLRYVHQRYDIATTLINRP-YNKLYSADTEIGQWLRSKNTIIKIN-DVLYMHGGISSEWISR 217 (342)
T ss_dssp TCEEEECCCHHHHHHHHTCCTTSCTTHHHHHHHTTSC-GGGGGSTTBHHHHHHHTCCSEEEET-TEEEESSCCCHHHHHT
T ss_pred CCeEEEEecCCcHHHhhCcccccccccchHHHHhccc-HHHHHHHhHHHHHHHhhCCeEEEEC-CEEEEECCCChhhccc
Confidence 99999999999999886421 1222222223222 23465544 44556669999887 79999999999764
Q ss_pred --CHHhhhhccCCccc-----CCCCcceeccccCCCCCCCCCCCcccCCCCCCceeeCHHHHHHHHHHcCCcEEEEcccc
Q 001901 833 --HVEQIENLQRPITM-----EAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHEC 905 (998)
Q Consensus 833 --~~~~i~~i~rp~~~-----~~~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~ 905 (998)
++++|+.+.|+... ... ..++++||+||.. .| .||.....||++++++||+.+++++|||||++
T Consensus 218 ~~~l~~i~~~~r~~~~~~~~~~~~-~~~~~~lwsd~~~-----~w---~R~~~~~~fg~~~~~~fl~~~~~~~IV~GHt~ 288 (342)
T 2z72_A 218 ELTLDKANALYRANVDASKKSLKA-DDLLNFLFFGNGP-----TW---YRGYFSETFTEAELDTILQHFNVNHIVVGHTS 288 (342)
T ss_dssp TCCHHHHHHHHHHHTTSCHHHHHH-SHHHHHHHSTTST-----TT---CCGGGSTTCCHHHHHHHHHHHTCSEEEECSSC
T ss_pred CCCHHHHHHHhhhhcccccccccc-CHHHHhccCCCCC-----CC---cCCcccccCChHHHHHHHHHCCCcEEEECCCc
Confidence 89999998886321 111 2568999999865 23 46652246999999999999999999999999
Q ss_pred cccceEEecCCeEEEEeccccccCCCCCeEEEEEEcCCc
Q 001901 906 VMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL 944 (998)
Q Consensus 906 ~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~~~~~~ 944 (998)
+++ +...+++++|||||+++|. |.+++|.|+++.
T Consensus 289 ~~~-~~~~~~~~~i~Idsg~~~g----g~la~l~i~~~~ 322 (342)
T 2z72_A 289 QER-VLGLFHNKVIAVDSSIKVG----KSGELLLLENNR 322 (342)
T ss_dssp CSS-CEEETTTTEEECCCCGGGS----SCCCEEEEETTE
T ss_pred ccc-hhhhcCCCEEEEECCCCCC----CcEEEEEEECCE
Confidence 866 6667899999999999994 678888887764
No 18
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=6.3e-35 Score=325.88 Aligned_cols=267 Identities=18% Similarity=0.257 Sum_probs=220.6
Q ss_pred CCCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEEEec
Q 001901 87 DGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRIT 166 (998)
Q Consensus 87 ~~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~ 166 (998)
..|.+|.+|+++++ +++||||||........ .....+++++||+.+++|+.++
T Consensus 31 ~~p~~r~~~~~~~~------------~~~iyv~GG~~~~~~~~---------------~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 31 SSQVPKNHVSLVTK------------ENQVFVAGGLFYNEDNK---------------EDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp CCCSCSSEEEEECT------------TCCEEEEEEEEECSSCS---------------SSCEEEEEEEEETTTTEEEECC
T ss_pred CCCCCccceEEEEE------------CCEEEEEcCcccCCCCC---------------ccccccceEEecCCCCeEEECC
Confidence 34779999999987 78999999974221100 0015678999999999999997
Q ss_pred CCCCCCCCccceEEEEeCCEEEEEeCCC--CCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEE
Q 001901 167 PFGEPPTPRAAHVATAVGTMVVIQGGIG--PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAI 244 (998)
Q Consensus 167 ~~g~~P~pR~~hsa~~~~~~lyVfGG~~--~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~ 244 (998)
++ |.+|.+|++++++++|||+||.. ......+++++||+.++ +|+.+. ++|.+|++|+++++++ +||++
T Consensus 84 ~~---p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~--~W~~~~---~~p~~r~~~~~~~~~~-~iyv~ 154 (315)
T 4asc_A 84 PL---PSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSF--KWGESD---PLPYVVYGHTVLSHMD-LVYVI 154 (315)
T ss_dssp CB---SSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTT--EEEECC---CCSSCCBSCEEEEETT-EEEEE
T ss_pred CC---CcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCC--cEeECC---CCCCcccceeEEEECC-EEEEE
Confidence 76 89999999999999999999975 34567899999999987 599987 8999999999999998 89999
Q ss_pred cCC-CCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEE
Q 001901 245 GGN-DGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEW 323 (998)
Q Consensus 245 GG~-~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w 323 (998)
||. ++...++++|+||+.++ +|+.+.++ |.+|..|++++ .+++|||+||.+... .+++++.|++.++ +|
T Consensus 155 GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~~~-~~~~iyv~GG~~~~~-~~~~~~~yd~~~~---~W 224 (315)
T 4asc_A 155 GGKGSDRKCLNKMCVYDPKKF--EWKELAPM---QTARSLFGATV-HDGRIIVAAGVTDTG-LTSSAEVYSITDN---KW 224 (315)
T ss_dssp CCBCTTSCBCCCEEEEETTTT--EEEECCCC---SSCCBSCEEEE-ETTEEEEEEEECSSS-EEEEEEEEETTTT---EE
T ss_pred eCCCCCCcccceEEEEeCCCC--eEEECCCC---CCchhceEEEE-ECCEEEEEeccCCCC-ccceEEEEECCCC---eE
Confidence 999 56677999999999999 99999765 44566666554 599999999997765 6889999999877 56
Q ss_pred EECCCCCCCCcceeEEEEECCEEEEEcccCCC----CC-ccccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCCC
Q 001901 324 AIAPGVSPSPRYQHAAVFVNARLHVSGGALGG----GR-MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGD 398 (998)
Q Consensus 324 ~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~----~~-~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~ 398 (998)
..++.+ |.+|..|+++.++++|||+||.+.. +. .....+++|+||+++++|+.+.
T Consensus 225 ~~~~~~-p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~------------------- 284 (315)
T 4asc_A 225 APFEAF-PQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVL------------------- 284 (315)
T ss_dssp EEECCC-SSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEE-------------------
T ss_pred EECCCC-CCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhc-------------------
Confidence 666554 7899999999999999999998532 11 0123688999999999999983
Q ss_pred CccCCCCcceeEEEEECCEEEEEcC
Q 001901 399 AAVELTRRCRHAAAAVGDLIFIYGG 423 (998)
Q Consensus 399 ~~~~p~~R~~hsa~~~~~~LyVfGG 423 (998)
+.+|..|++++++++|||+..
T Consensus 285 ----~~~r~~~~~~~~~~~l~v~~~ 305 (315)
T 4asc_A 285 ----REIAYAAGATFLPVRLNVLRL 305 (315)
T ss_dssp ----SCSSCCSSCEEEEEEECGGGS
T ss_pred ----cCCcCccceEEeCCEEEEEEe
Confidence 348999999999999999975
No 19
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=9.5e-34 Score=313.64 Aligned_cols=254 Identities=20% Similarity=0.332 Sum_probs=218.0
Q ss_pred cccCCCCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCc-
Q 001901 83 EKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNK- 161 (998)
Q Consensus 83 ~~~g~~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~- 161 (998)
......|.+|.+|+++.+ +++||+|||..... .++++++||+.+++
T Consensus 44 ~~~~~~p~~r~~~~~~~~------------~~~l~v~GG~~~~~---------------------~~~~~~~~d~~~~~~ 90 (301)
T 2vpj_A 44 SFLPSITRKRRYVASVSL------------HDRIYVIGGYDGRS---------------------RLSSVECLDYTADED 90 (301)
T ss_dssp EECCCCSSCCBSCEEEEE------------TTEEEEECCBCSSC---------------------BCCCEEEEETTCCTT
T ss_pred EeCCCCChhhccccEEEE------------CCEEEEEcCCCCCc---------------------cCceEEEEECCCCCC
Confidence 344468899999999998 78999999986432 77899999999999
Q ss_pred --EEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCc
Q 001901 162 --WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQR 239 (998)
Q Consensus 162 --W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~ 239 (998)
|+.+..+ |.+|..|++++++++|||+||.... ..++++++||+.++ +|+.+. ++|.+|..|+++++++
T Consensus 91 ~~W~~~~~~---p~~r~~~~~~~~~~~lyv~GG~~~~-~~~~~~~~~d~~~~--~W~~~~---~~p~~r~~~~~~~~~~- 160 (301)
T 2vpj_A 91 GVWYSVAPM---NVRRGLAGATTLGDMIYVSGGFDGS-RRHTSMERYDPNID--QWSMLG---DMQTAREGAGLVVASG- 160 (301)
T ss_dssp CCCEEECCC---SSCCBSCEEEEETTEEEEECCBCSS-CBCCEEEEEETTTT--EEEEEE---ECSSCCBSCEEEEETT-
T ss_pred CeeEECCCC---CCCccceeEEEECCEEEEEcccCCC-cccceEEEEcCCCC--eEEECC---CCCCCcccceEEEECC-
Confidence 9999766 8999999999999999999998643 45789999999987 599997 7899999999999987
Q ss_pred EEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCC
Q 001901 240 YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDG 319 (998)
Q Consensus 240 ~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~ 319 (998)
+||++||.++...++++++||+.++ +|+.+.++ |.+|..|+++ ..+++||++||.+... .+++++.|+..++
T Consensus 161 ~iyv~GG~~~~~~~~~~~~~d~~~~--~W~~~~~~---p~~r~~~~~~-~~~~~i~v~GG~~~~~-~~~~v~~yd~~~~- 232 (301)
T 2vpj_A 161 VIYCLGGYDGLNILNSVEKYDPHTG--HWTNVTPM---ATKRSGAGVA-LLNDHIYVVGGFDGTA-HLSSVEAYNIRTD- 232 (301)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTTT--EEEEECCC---SSCCBSCEEE-EETTEEEEECCBCSSS-BCCCEEEEETTTT-
T ss_pred EEEEECCCCCCcccceEEEEeCCCC--cEEeCCCC---CcccccceEE-EECCEEEEEeCCCCCc-ccceEEEEeCCCC-
Confidence 8999999998888999999999999 99999654 4556666555 4599999999998665 4889999999877
Q ss_pred eEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCC
Q 001901 320 RWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA 399 (998)
Q Consensus 320 ~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~ 399 (998)
+|..+..+ |.+|..|+++.++++|||+||.+... ..+++++||+++++|+.+..+
T Consensus 233 --~W~~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~------------------ 287 (301)
T 2vpj_A 233 --SWTTVTSM-TTPRCYVGATVLRGRLYAIAGYDGNS----LLSSIECYDPIIDSWEVVTSM------------------ 287 (301)
T ss_dssp --EEEEECCC-SSCCBSCEEEEETTEEEEECCBCSSS----BEEEEEEEETTTTEEEEEEEE------------------
T ss_pred --cEEECCCC-CCcccceeEEEECCEEEEEcCcCCCc----ccccEEEEcCCCCeEEEcCCC------------------
Confidence 55566544 78999999999999999999987543 268899999999999999887
Q ss_pred ccCCCCcceeEEEEEC
Q 001901 400 AVELTRRCRHAAAAVG 415 (998)
Q Consensus 400 ~~~p~~R~~hsa~~~~ 415 (998)
|.+|+.|+++++.
T Consensus 288 ---~~~r~~~~~~~~~ 300 (301)
T 2vpj_A 288 ---GTQRCDAGVCVLR 300 (301)
T ss_dssp ---EEEEESCEEEEEE
T ss_pred ---CcccccceEEEeC
Confidence 6699999999874
No 20
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=5.2e-34 Score=318.43 Aligned_cols=249 Identities=18% Similarity=0.288 Sum_probs=209.8
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeCC-----CCCCCCcccEEEEEcCCCCCceEEeeecCCCC
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGI-----GPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~-----~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P 225 (998)
++++||+.+++|+. ..+ ..|.+|.+|++++++++|||+||. .......+++++||+.++ +|+.++ ++|
T Consensus 14 ~~~~yd~~~~~W~~-~~~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~--~W~~~~---~~p 86 (315)
T 4asc_A 14 GAVAYDPAANECYC-ASL-SSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDS--EWLGMP---PLP 86 (315)
T ss_dssp EEEEEETTTTEEEE-EEC-CCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTT--EEEECC---CBS
T ss_pred ceEEECCCCCeEec-CCC-CCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCC--eEEECC---CCC
Confidence 78999999999997 333 236799999999999999999996 223344577999999987 599987 899
Q ss_pred CCCcccEEEEECCcEEEEEcCCC---CCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCC
Q 001901 226 GPRYGHVMALVGQRYLMAIGGND---GKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (998)
Q Consensus 226 ~~R~~hs~~~~~~~~Lyv~GG~~---g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~ 302 (998)
.+|.+|+++++++ +||++||.+ +...++++|+||+.++ +|+.+.++ |.+|..|++++ .+++||++||.+.
T Consensus 87 ~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~~~~d~~~~--~W~~~~~~---p~~r~~~~~~~-~~~~iyv~GG~~~ 159 (315)
T 4asc_A 87 SPRCLFGLGEALN-SIYVVGGREIKDGERCLDSVMCYDRLSF--KWGESDPL---PYVVYGHTVLS-HMDLVYVIGGKGS 159 (315)
T ss_dssp SCEESCEEEEETT-EEEEECCEESSTTCCBCCCEEEEETTTT--EEEECCCC---SSCCBSCEEEE-ETTEEEEECCBCT
T ss_pred cchhceeEEEECC-EEEEEeCCcCCCCCcccceEEEECCCCC--cEeECCCC---CCcccceeEEE-ECCEEEEEeCCCC
Confidence 9999999999987 899999974 4667999999999999 99999764 44566665554 6999999999966
Q ss_pred CCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccCc
Q 001901 303 SSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVV 382 (998)
Q Consensus 303 ~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~~ 382 (998)
....+++++.|++.++ +|..++.+ |.+|..|++++++++|||+||.+... ..+++++||+++++|+.+..+
T Consensus 160 ~~~~~~~~~~yd~~~~---~W~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~----~~~~~~~yd~~~~~W~~~~~~- 230 (315)
T 4asc_A 160 DRKCLNKMCVYDPKKF---EWKELAPM-QTARSLFGATVHDGRIIVAAGVTDTG----LTSSAEVYSITDNKWAPFEAF- 230 (315)
T ss_dssp TSCBCCCEEEEETTTT---EEEECCCC-SSCCBSCEEEEETTEEEEEEEECSSS----EEEEEEEEETTTTEEEEECCC-
T ss_pred CCcccceEEEEeCCCC---eEEECCCC-CCchhceEEEEECCEEEEEeccCCCC----ccceEEEEECCCCeEEECCCC-
Confidence 6667899999999988 77777765 78999999999999999999987654 267899999999999999876
Q ss_pred CCCCCCCCccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCC------C---CCcccEEEecccccc
Q 001901 383 TSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRG------G---VLLDDLLVAEDLAAA 442 (998)
Q Consensus 383 ~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyVfGG~~~------~---~~l~Dv~~ld~~~~~ 442 (998)
|.+|..|++++++++|||+||.++ . ..++|+|++|.....
T Consensus 231 --------------------p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 231 --------------------PQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp --------------------SSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred --------------------CCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence 679999999999999999999753 1 468999999976543
No 21
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=4e-34 Score=319.82 Aligned_cols=267 Identities=16% Similarity=0.279 Sum_probs=217.7
Q ss_pred CCCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEEEec
Q 001901 87 DGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRIT 166 (998)
Q Consensus 87 ~~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~ 166 (998)
..|.||.+|+++.+ +++||||||......... ....+++++||+.+++|++++
T Consensus 42 ~~~~~r~~~~~~~~------------~~~lyv~GG~~~~~~~~~---------------~~~~~~~~~~d~~~~~W~~~~ 94 (318)
T 2woz_A 42 AEQIPRNHSSIVTQ------------QNQVYVVGGLYVDEENKD---------------QPLQSYFFQLDNVSSEWVGLP 94 (318)
T ss_dssp CTTSCSSEEEEECS------------SSCEEEEESSCC----------------------CCCBEEEEEETTTTEEEECS
T ss_pred CccCCccceEEEEE------------CCEEEEECCcccCccccC---------------CCccccEEEEeCCCCcEEECC
Confidence 45689999999887 789999999643221000 014567999999999999997
Q ss_pred CCCCCCCCccceEEEEeCCEEEEEeCCCC-CCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEc
Q 001901 167 PFGEPPTPRAAHVATAVGTMVVIQGGIGP-AGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIG 245 (998)
Q Consensus 167 ~~g~~P~pR~~hsa~~~~~~lyVfGG~~~-~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~G 245 (998)
.+ |.+|.+|++++++++|||+||... ....++++++||+.++ +|+.+. ++|.+|++|+++++++ +||++|
T Consensus 95 ~~---p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~--~W~~~~---~~p~~r~~~~~~~~~~-~iyv~G 165 (318)
T 2woz_A 95 PL---PSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAA--KWSEVK---NLPIKVYGHNVISHNG-MIYCLG 165 (318)
T ss_dssp CB---SSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTT--EEEEEC---CCSSCEESCEEEEETT-EEEEEC
T ss_pred CC---CccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCC--CEeECC---CCCCcccccEEEEECC-EEEEEc
Confidence 76 899999999999999999999863 4567899999999987 599997 8999999999999987 899999
Q ss_pred CCC-CCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEE
Q 001901 246 GND-GKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWA 324 (998)
Q Consensus 246 G~~-g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~ 324 (998)
|.+ +...++++|+||+.++ +|+.+.++ |.+|..|+++ +.+++|||+||.+... .+++++.|++.++ +|.
T Consensus 166 G~~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~~-~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~---~W~ 235 (318)
T 2woz_A 166 GKTDDKKCTNRVFIYNPKKG--DWKDLAPM---KTPRSMFGVA-IHKGKIVIAGGVTEDG-LSASVEAFDLKTN---KWE 235 (318)
T ss_dssp CEESSSCBCCCEEEEETTTT--EEEEECCC---SSCCBSCEEE-EETTEEEEEEEEETTE-EEEEEEEEETTTC---CEE
T ss_pred CCCCCCCccceEEEEcCCCC--EEEECCCC---CCCcccceEE-EECCEEEEEcCcCCCC-ccceEEEEECCCC---eEE
Confidence 984 4557899999999999 99999754 4556666554 4599999999987654 5789999999877 566
Q ss_pred ECCCCCCCCcceeEEEEECCEEEEEcccCCCCC-----ccccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCC
Q 001901 325 IAPGVSPSPRYQHAAVFVNARLHVSGGALGGGR-----MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA 399 (998)
Q Consensus 325 ~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~-----~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~ 399 (998)
.+..+ |.+|..|+++.++++|||+||.+.... .....+++|+||+++++|+++ +
T Consensus 236 ~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~------------------ 294 (318)
T 2woz_A 236 VMTEF-PQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM--L------------------ 294 (318)
T ss_dssp ECCCC-SSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE--E------------------
T ss_pred ECCCC-CCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh--c------------------
Confidence 66654 789999999999999999999865311 012368999999999999998 3
Q ss_pred ccCCCCcceeEEEEECCEEEEEcC
Q 001901 400 AVELTRRCRHAAAAVGDLIFIYGG 423 (998)
Q Consensus 400 ~~~p~~R~~hsa~~~~~~LyVfGG 423 (998)
+.+|+.|++++++++||||..
T Consensus 295 ---~~~r~~~~~~~~~~~iyi~~~ 315 (318)
T 2woz_A 295 ---KEIRYASGASCLATRLNLFKL 315 (318)
T ss_dssp ---SCCGGGTTCEEEEEEEEGGGC
T ss_pred ---ccccccccceeeCCEEEEEEe
Confidence 448999999999999999853
No 22
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=1.6e-33 Score=314.93 Aligned_cols=250 Identities=17% Similarity=0.276 Sum_probs=207.7
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCC-----CCCcccEEEEEcCCCCCceEEeeecCCCC
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPA-----GLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~-----~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P 225 (998)
++++||+.+++|...... .|.||.+|++++++++|||+||.... ....+++++||+.++ +|..++ ++|
T Consensus 25 ~~~~yd~~~~~W~~~~~~--~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~--~W~~~~---~~p 97 (318)
T 2woz_A 25 AAVAYDPMENECYLTALA--EQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSS--EWVGLP---PLP 97 (318)
T ss_dssp EEEEEETTTTEEEEEEEC--TTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTT--EEEECS---CBS
T ss_pred ceEEECCCCCceecccCC--ccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCC--cEEECC---CCC
Confidence 478999999999985422 36899999999999999999996321 123456999999987 599987 899
Q ss_pred CCCcccEEEEECCcEEEEEcCCC--CCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCC
Q 001901 226 GPRYGHVMALVGQRYLMAIGGND--GKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDAS 303 (998)
Q Consensus 226 ~~R~~hs~~~~~~~~Lyv~GG~~--g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~ 303 (998)
.+|+.|+++++++ +|||+||.+ +...++++|+||+.++ +|+.+.++ |.+|..|++++ .+++||++||.+..
T Consensus 98 ~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~~~-~~~~iyv~GG~~~~ 170 (318)
T 2woz_A 98 SARCLFGLGEVDD-KIYVVAGKDLQTEASLDSVLCYDPVAA--KWSEVKNL---PIKVYGHNVIS-HNGMIYCLGGKTDD 170 (318)
T ss_dssp SCBCSCEEEEETT-EEEEEEEEBTTTCCEEEEEEEEETTTT--EEEEECCC---SSCEESCEEEE-ETTEEEEECCEESS
T ss_pred ccccccceEEECC-EEEEEcCccCCCCcccceEEEEeCCCC--CEeECCCC---CCcccccEEEE-ECCEEEEEcCCCCC
Confidence 9999999999987 899999986 4567899999999999 99999754 44566666555 69999999998666
Q ss_pred CCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccCcC
Q 001901 304 SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVT 383 (998)
Q Consensus 304 ~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~~~ 383 (998)
...+++++.|++.++ +|..++.+ |.+|..|++++++++|||+||.+... ..+++++||+++++|+.+..+
T Consensus 171 ~~~~~~~~~yd~~~~---~W~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~----~~~~~~~yd~~~~~W~~~~~~-- 240 (318)
T 2woz_A 171 KKCTNRVFIYNPKKG---DWKDLAPM-KTPRSMFGVAIHKGKIVIAGGVTEDG----LSASVEAFDLKTNKWEVMTEF-- 240 (318)
T ss_dssp SCBCCCEEEEETTTT---EEEEECCC-SSCCBSCEEEEETTEEEEEEEEETTE----EEEEEEEEETTTCCEEECCCC--
T ss_pred CCccceEEEEcCCCC---EEEECCCC-CCCcccceEEEECCEEEEEcCcCCCC----ccceEEEEECCCCeEEECCCC--
Confidence 667899999999987 55666554 78999999999999999999987643 367899999999999999876
Q ss_pred CCCCCCCccccCCCCCccCCCCcceeEEEEECCEEEEEcCCCC---------CCCcccEEEeccccccc
Q 001901 384 SPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRG---------GVLLDDLLVAEDLAAAE 443 (998)
Q Consensus 384 ~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyVfGG~~~---------~~~l~Dv~~ld~~~~~~ 443 (998)
|.+|..|++++++++|||+||.+. ...++|+|++|......
T Consensus 241 -------------------p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 290 (318)
T 2woz_A 241 -------------------PQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEW 290 (318)
T ss_dssp -------------------SSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEE
T ss_pred -------------------CCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEe
Confidence 668999999999999999999765 24689999999765443
No 23
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=8.2e-34 Score=350.54 Aligned_cols=293 Identities=14% Similarity=0.160 Sum_probs=235.0
Q ss_pred CCCCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEEEe
Q 001901 86 EDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRI 165 (998)
Q Consensus 86 g~~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l 165 (998)
...|.+|++|+++ + +++||||||... . .++++|+||+.+++|+.+
T Consensus 383 ~~~p~rr~g~~~~-~------------~~~iyv~GG~~~-~---------------------~~~~v~~yd~~~~~W~~~ 427 (695)
T 2zwa_A 383 ECPINRKFGDVDV-A------------GNDVFYMGGSNP-Y---------------------RVNEILQLSIHYDKIDMK 427 (695)
T ss_dssp CCTTCCBSCEEEE-C------------SSCEEEECCBSS-S---------------------BCCCEEEEEECSSCEEEE
T ss_pred CCCCCCceeEEEE-E------------CCEEEEECCCCC-C---------------------CcCcEEEEECCCCeEEEe
Confidence 4577788887766 4 689999999865 2 778999999999999999
Q ss_pred c-C--CCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcE
Q 001901 166 T-P--FGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRY 240 (998)
Q Consensus 166 ~-~--~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~ 240 (998)
. + .+..|.+|.+|+++++ +++|||+||.+.....++++|+||+.++ +|+.+. ++|.+|++|+++++.+++
T Consensus 428 ~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~--~W~~~~---~~p~~R~~h~~~~~~~~~ 502 (695)
T 2zwa_A 428 NIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTR--EWSMIK---SLSHTRFRHSACSLPDGN 502 (695)
T ss_dssp ECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTT--EEEECC---CCSBCCBSCEEEECTTSC
T ss_pred ccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCC--cEEECC---CCCCCcccceEEEEcCCE
Confidence 8 5 2456999999999999 9999999998766667899999999997 599996 899999999999973448
Q ss_pred EEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEe-C-CEEEEEeccCCCC-CCcccEEEEecCC
Q 001901 241 LMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS-D-GLLLLCGGRDASS-VPLASAYGLAKHR 317 (998)
Q Consensus 241 Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~-~-~~lyvfGG~~~~~-~~~~dv~~~~~~~ 317 (998)
||||||.++.. ++|+||+.++ +|+.+.+.+..|.+|..|+++++. + ++||||||.+.+. ..++++|.|++.+
T Consensus 503 iyv~GG~~~~~---~v~~yd~~t~--~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~ 577 (695)
T 2zwa_A 503 VLILGGVTEGP---AMLLYNVTEE--IFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDA 577 (695)
T ss_dssp EEEECCBCSSC---SEEEEETTTT--EEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECT
T ss_pred EEEECCCCCCC---CEEEEECCCC--ceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccC
Confidence 99999998765 9999999999 999999877778888888877653 2 8999999986554 5689999999987
Q ss_pred CCeE----EEEECCCCCCCCcceeEEEEEC-CEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccCcCCCCCCCCcc
Q 001901 318 DGRW----EWAIAPGVSPSPRYQHAAVFVN-ARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSA 392 (998)
Q Consensus 318 ~~~W----~w~~~~g~~P~pR~~hsav~~~-~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~ 392 (998)
+ +| +|..+..+++.+|++|++++++ ++|||+||.+.... ....+++++||+.+++|+.+......
T Consensus 578 ~-~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~-~~~~~~v~~yd~~t~~W~~~~~p~~~-------- 647 (695)
T 2zwa_A 578 E-NATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGL-FDRTNSIISLDPLSETLTSIPISRRI-------- 647 (695)
T ss_dssp T-CSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCC-CCTTTSEEEEETTTTEEEECCCCHHH--------
T ss_pred C-ccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCC-CCCCCeEEEEECCCCeEEEeeccccc--------
Confidence 7 43 4666655446899999999999 99999999865432 13478999999999999954322100
Q ss_pred ccCCCCCccCCCCcceeEEEEECC-EEEEEcC----CCCCCCcccEEEeccc
Q 001901 393 DAAGGDAAVELTRRCRHAAAAVGD-LIFIYGG----LRGGVLLDDLLVAEDL 439 (998)
Q Consensus 393 ~~~~~~~~~~p~~R~~hsa~~~~~-~LyVfGG----~~~~~~l~Dv~~ld~~ 439 (998)
....+..|.+|+++.+++ +|||+|| ++-+.++|++|.+|..
T Consensus 648 ------~~~~~p~~~gh~~~~~~~g~i~v~GGg~~cfsfGt~~n~i~~ldl~ 693 (695)
T 2zwa_A 648 ------WEDHSLMLAGFSLVSTSMGTIHIIGGGATCYGFGSVTNVGLKLIAI 693 (695)
T ss_dssp ------HHHSCCCCSSCEEECC---CEEEECCEEECTTSCEEECCCEEEEEC
T ss_pred ------cCCCCccceeeeEEEeCCCEEEEEeCCccCcCccccccceEEEEEE
Confidence 000112678899999877 9999999 3446778899999864
No 24
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.97 E-value=2e-29 Score=286.02 Aligned_cols=250 Identities=22% Similarity=0.290 Sum_probs=191.4
Q ss_pred ccCCCC-CCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCC-CCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCc
Q 001901 84 KKEDGP-GPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATA-LEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNK 161 (998)
Q Consensus 84 ~~g~~P-~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~ 161 (998)
.....| .+|.+|+++++ +++||||||... .... ...++++|+||+.+++
T Consensus 47 ~~~~~p~~~R~~~~~~~~------------~~~lyv~GG~~~~~~~~-----------------~~~~~~v~~yd~~~~~ 97 (357)
T 2uvk_A 47 ALAAFPGGPRDQATSAFI------------DGNLYVFGGIGKNSEGL-----------------TQVFNDVHKYNPKTNS 97 (357)
T ss_dssp ECCCCTTCCCBSCEEEEE------------TTEEEEECCEEECTTSC-----------------EEECCCEEEEETTTTE
T ss_pred ECCCCCCCcCccceEEEE------------CCEEEEEcCCCCCCCcc-----------------ceeeccEEEEeCCCCc
Confidence 344578 89999999999 789999999822 1100 1178999999999999
Q ss_pred EEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCC---------------------------------CCcccEEEEEc
Q 001901 162 WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAG---------------------------------LSAEDLHVLDL 208 (998)
Q Consensus 162 W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~---------------------------------~~~~dv~~~Dl 208 (998)
|+++.++. |.+|.+|++++++++|||+||.+... ..++++++||+
T Consensus 98 W~~~~~~~--p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 175 (357)
T 2uvk_A 98 WVKLMSHA--PMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDP 175 (357)
T ss_dssp EEECSCCC--SSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEET
T ss_pred EEECCCCC--CcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeC
Confidence 99999884 79999999999999999999975321 24589999999
Q ss_pred CCCCCceEEeeecCCCCCCCc-ccEEEEECCcEEEEEcCCCCC-CCcccEEEEEC--CCCCceEEEcccCCCCCCCccce
Q 001901 209 TQQRPRWHRVVVQGPGPGPRY-GHVMALVGQRYLMAIGGNDGK-RPLADVWALDT--AAKPYEWRKLEPEGEGPPPCMYA 284 (998)
Q Consensus 209 ~t~t~~W~~l~~~g~~P~~R~-~hs~~~~~~~~Lyv~GG~~g~-~~lndv~~yD~--~s~~~~W~~v~~~~~~P~~r~~~ 284 (998)
.++ +|+.+. ++|.+|. +|+++++++ +||||||.++. ...+++|+||+ .++ +|+.+.++.. |.. +..
T Consensus 176 ~~~--~W~~~~---~~p~~~~~~~~~~~~~~-~iyv~GG~~~~~~~~~~v~~~d~d~~~~--~W~~~~~~~~-~~~-~~~ 245 (357)
T 2uvk_A 176 STQ--QWSYAG---ESPWYGTAGAAVVNKGD-KTWLINGEAKPGLRTDAVFELDFTGNNL--KWNKLAPVSS-PDG-VAG 245 (357)
T ss_dssp TTT--EEEEEE---ECSSCCCBSCEEEEETT-EEEEECCEEETTEECCCEEEEECC---C--EEEECCCSST-TTC-CBS
T ss_pred CCC--cEEECC---CCCCCCcccccEEEECC-EEEEEeeecCCCcccCceEEEEecCCCC--cEEecCCCCC-Ccc-ccc
Confidence 987 599997 7787655 499999987 89999998653 35789999987 777 9999987632 222 334
Q ss_pred EEEEEeCCEEEEEeccCCC----------------CCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEE
Q 001901 285 TASARSDGLLLLCGGRDAS----------------SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHV 348 (998)
Q Consensus 285 ~a~~~~~~~lyvfGG~~~~----------------~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V 348 (998)
+++++.+++||||||.+.. ...+++++.|++.++ +|+ .+.. .|.+|..|+++.++++|||
T Consensus 246 ~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~-~W~--~~~~-~p~~r~~~~~~~~~~~i~v 321 (357)
T 2uvk_A 246 GFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNG-KWD--KSGE-LSQGRAYGVSLPWNNSLLI 321 (357)
T ss_dssp CEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC----CE--EEEE-CSSCCBSSEEEEETTEEEE
T ss_pred ceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCC-cee--eCCC-CCCCcccceeEEeCCEEEE
Confidence 4556669999999997432 123578899998866 555 4444 4789999999999999999
Q ss_pred EcccCCCCCccccCCeEEEEECCCCeEEEcccC
Q 001901 349 SGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (998)
Q Consensus 349 ~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~ 381 (998)
+||.+..+. ..+++++|++++++|.+..+.
T Consensus 322 ~GG~~~~~~---~~~~v~~l~~~~~~~~~~~~~ 351 (357)
T 2uvk_A 322 IGGETAGGK---AVTDSVLITVKDNKVTVQNLE 351 (357)
T ss_dssp EEEECGGGC---EEEEEEEEEC-CCSCEEEC--
T ss_pred EeeeCCCCC---EeeeEEEEEEcCcEeEeeecc
Confidence 999876543 268999999999999998776
No 25
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=99.96 E-value=1.4e-30 Score=285.56 Aligned_cols=200 Identities=21% Similarity=0.340 Sum_probs=161.6
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCC-CCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccc
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPS-TAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAAD 776 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~-~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~ 776 (998)
++++||||||||+.+|.++|+.+++++ .+ .+||||||||||++++||+.+|++| |..+++||||||.+.
T Consensus 1 M~i~vigDiHG~~~~l~~ll~~~~~~~~~d------~~v~lGD~vdrG~~s~~~l~~l~~l----~~~~~~v~GNHe~~~ 70 (280)
T 2dfj_A 1 MATYLIGDVHGCYDELIALLHKVEFTPGKD------TLWLTGDLVARGPGSLDVLRYVKSL----GDSVRLVLGNHDLHL 70 (280)
T ss_dssp -CEEEECCCCSCHHHHHHHHHHTTCCTTTC------EEEECSCCSSSSSCHHHHHHHHHHT----GGGEEECCCHHHHHH
T ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCC------EEEEeCCcCCCCCccHHHHHHHHhC----CCceEEEECCCcHHH
Confidence 368999999999999999999999843 33 7999999999999999999999997 358999999999999
Q ss_pred hhhhcCChHHHHHHhCCC--cchhhhhhhhhhhcccceeEEEcC-eEEEecCCccCcccCHHhhhhccCCccc---CCCC
Q 001901 777 INALFGFRIECIERMGER--DGIWAWHRINRLFNWLPLAALIEK-KIICMHGGIGRSINHVEQIENLQRPITM---EAGS 850 (998)
Q Consensus 777 ~~~~~gf~~e~~~~~g~~--~~~~~~~~~~~~f~~LP~aa~i~~-~il~vHgGi~~~~~~~~~i~~i~rp~~~---~~~~ 850 (998)
++..+||..+.. +..-. .....+..+.++|+.||+++.+++ +++||||||+|.+ ++++++.+.|+++. ....
T Consensus 71 l~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHaGi~p~~-~l~~~~~~~r~~e~~l~~~~~ 148 (280)
T 2dfj_A 71 LAVFAGISRNKP-KDRLTPLLEAPDADELLNWLRRQPLLQIDEEKKLVMAHAGITPQW-DLQTAKECARDVEAVLSSDSY 148 (280)
T ss_dssp HHHHTTSSCCCG-GGCCHHHHTSTTHHHHHHHHHTSCSEEEETTTTEEEESSCCCTTC-CHHHHHHHHHHHHHHHHSTTH
T ss_pred HhHhcCCcccch-hhhHHHHhhhhHHHHHHHHHHhCCcEEEECCCeEEEEeCCCCcCc-CHHHHHHHHHHHHHhhcCCcH
Confidence 999998864211 00000 001134556778888899988887 9999999999996 79999888887652 1122
Q ss_pred cceeccccCCCCCCCCCCCcccCCCCCCceeeCHHH--HHHHHHHcC-CcEEEEcc-cccccceEEec
Q 001901 851 IVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDR--VMEFCNNND-LQLIVRAH-ECVMDGFERFA 914 (998)
Q Consensus 851 ~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~--~~~fl~~~~-l~~iiR~H-~~~~~G~~~~~ 914 (998)
..++|+||+||. ..|.++.||.+.+.||.++ ..+||+.+| +++++|+| |.+++||+.++
T Consensus 149 ~~~~~~l~~d~~-----~~w~~~~~G~~r~~~~~~~~tr~rf~~~~g~l~~~~r~~~~~~~~g~~~w~ 211 (280)
T 2dfj_A 149 PFFLDAMYGDMP-----NNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESPEEAPAPLKPWF 211 (280)
T ss_dssp HHHHHHTTCSCC-----CSCCTTCCHHHHHHHHHHHHHTCCEEETTBEEESSCCSCGGGCCSSCEEGG
T ss_pred HHHHHHhcCCCC-----CCcCCCCCCceeEEEeccHHHHHHHhhcCCcEeEEeccChhhcCccccchh
Confidence 357899999996 3599999999977899998 578999999 99999999 88999998765
No 26
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.95 E-value=5.9e-27 Score=289.33 Aligned_cols=236 Identities=17% Similarity=0.228 Sum_probs=192.6
Q ss_pred CCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEee-e--cCCCCCCCcccEEEEE--CCcEEEEEc
Q 001901 171 PPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVV-V--QGPGPGPRYGHVMALV--GQRYLMAIG 245 (998)
Q Consensus 171 ~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~-~--~g~~P~~R~~hs~~~~--~~~~Lyv~G 245 (998)
.|.+|++|+++ ++++|||+||.+. ...+++|+||+.+++ |+.+. + .+.+|.+|++|+++++ ++ +|||||
T Consensus 385 ~p~rr~g~~~~-~~~~iyv~GG~~~--~~~~~v~~yd~~~~~--W~~~~~~~p~~~~p~~R~~hs~~~~~~~~-~lyv~G 458 (695)
T 2zwa_A 385 PINRKFGDVDV-AGNDVFYMGGSNP--YRVNEILQLSIHYDK--IDMKNIEVSSSEVPVARMCHTFTTISRNN-QLLLIG 458 (695)
T ss_dssp TTCCBSCEEEE-CSSCEEEECCBSS--SBCCCEEEEEECSSC--EEEEECCCCCSCCCCCCBSCEEEEETTTT-EEEEEC
T ss_pred CCCCceeEEEE-ECCEEEEECCCCC--CCcCcEEEEECCCCe--EEEeccCCCCCCCCccccceEEEEEccCC-EEEEEc
Confidence 46667766554 8999999999865 667999999999874 99998 3 4679999999999999 66 899999
Q ss_pred CCCCCC-CcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEE
Q 001901 246 GNDGKR-PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWA 324 (998)
Q Consensus 246 G~~g~~-~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~ 324 (998)
|.++.. .++++|+||+.++ +|+.+.++ |.+|..|+++++.+++||||||.+... +++.|++.++ +|+..
T Consensus 459 G~~~~~~~~~dv~~yd~~t~--~W~~~~~~---p~~R~~h~~~~~~~~~iyv~GG~~~~~----~v~~yd~~t~-~W~~~ 528 (695)
T 2zwa_A 459 GRKAPHQGLSDNWIFDMKTR--EWSMIKSL---SHTRFRHSACSLPDGNVLILGGVTEGP----AMLLYNVTEE-IFKDV 528 (695)
T ss_dssp CBSSTTCBCCCCEEEETTTT--EEEECCCC---SBCCBSCEEEECTTSCEEEECCBCSSC----SEEEEETTTT-EEEEC
T ss_pred CCCCCCCccccEEEEeCCCC--cEEECCCC---CCCcccceEEEEcCCEEEEECCCCCCC----CEEEEECCCC-ceEEc
Confidence 998754 7899999999999 99999765 556777877776699999999987655 8999999877 44444
Q ss_pred ECCCCCCCCcceeEEEEEC---CEEEEEcccCCCCCccccCCeEEEEECCCCe------EEEcccCcCCCCCCCCccccC
Q 001901 325 IAPGVSPSPRYQHAAVFVN---ARLHVSGGALGGGRMVEDSSSVAVLDTAAGV------WCDTKSVVTSPRTGRYSADAA 395 (998)
Q Consensus 325 ~~~g~~P~pR~~hsav~~~---~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~------W~~v~~~~~~p~~~~~~~~~~ 395 (998)
...+..|.+|.+|++++++ ++|||+||....+. ...+++|+||+.+++ |+.+..++
T Consensus 529 ~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~--~~~~~v~~yd~~~~~w~~~~~W~~~~~~p------------- 593 (695)
T 2zwa_A 529 TPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQT--TVSDKAIIFKYDAENATEPITVIKKLQHP------------- 593 (695)
T ss_dssp CCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSS--CBCCEEEEEEECTTCSSCCEEEEEEEECG-------------
T ss_pred cCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCC--eeeCcEEEEEccCCccccceEEEEcCCCC-------------
Confidence 4334468899999988877 89999999865432 247899999999999 88887641
Q ss_pred CCCCccCCCCcceeEEEEEC-CEEEEEcCCCCC---CCcccEEEecccccccc
Q 001901 396 GGDAAVELTRRCRHAAAAVG-DLIFIYGGLRGG---VLLDDLLVAEDLAAAET 444 (998)
Q Consensus 396 ~~~~~~~p~~R~~hsa~~~~-~~LyVfGG~~~~---~~l~Dv~~ld~~~~~~~ 444 (998)
+.+|++|++++++ ++|||+||.++. ..+++++++|.......
T Consensus 594 -------~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 594 -------LFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp -------GGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred -------CCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEE
Confidence 3589999999999 999999998754 36899999997764443
No 27
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.95 E-value=5.2e-27 Score=288.53 Aligned_cols=275 Identities=15% Similarity=0.099 Sum_probs=203.0
Q ss_pred CCCCCcCceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEEEecC
Q 001901 88 GPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITP 167 (998)
Q Consensus 88 ~P~pR~ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~ 167 (998)
.|.||.+|+++++.. +++||++||........ ......++++||+.+++|+.+..
T Consensus 182 ~~~P~~~~~~av~~~----------~g~l~v~GG~~~~~~~~---------------~~~~~~~~~~yd~~t~~w~~~~~ 236 (656)
T 1k3i_A 182 IDLPIVPAAAAIEPT----------SGRVLMWSSYRNDAFGG---------------SPGGITLTSSWDPSTGIVSDRTV 236 (656)
T ss_dssp EECSSCCSEEEEETT----------TTEEEEEEECCCTTTCS---------------CCCSEEEEEEECTTTCCBCCCEE
T ss_pred ccCCCCceeEEEEec----------CCEEEEEeccccccccc---------------CCCCeEEEEEEeCCCCcEEeCcc
Confidence 357788888887732 58999999986532100 00134589999999999999877
Q ss_pred CCCCCCCccceE--EEE-eCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEE
Q 001901 168 FGEPPTPRAAHV--ATA-VGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAI 244 (998)
Q Consensus 168 ~g~~P~pR~~hs--a~~-~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~ 244 (998)
+ |.+|..|+ +++ .+++||++||... .++++||+.++ +|+.+. ++|.+|+.|+++++.+++|||+
T Consensus 237 ~---~~~~~~~~~~~~~~~~g~lyv~GG~~~-----~~v~~yd~~t~--~W~~~~---~~~~~R~~~s~~~~~dg~iyv~ 303 (656)
T 1k3i_A 237 T---VTKHDMFCPGISMDGNGQIVVTGGNDA-----KKTSLYDSSSD--SWIPGP---DMQVARGYQSSATMSDGRVFTI 303 (656)
T ss_dssp E---ECSCCCSSCEEEECTTSCEEEECSSST-----TCEEEEEGGGT--EEEECC---CCSSCCSSCEEEECTTSCEEEE
T ss_pred c---CCCCCCccccccCCCCCCEEEeCCCCC-----CceEEecCcCC--ceeECC---CCCccccccceEEecCCeEEEE
Confidence 6 56665553 444 4789999999753 37999999987 599987 8999999999999944489999
Q ss_pred cC-CCCCCCcccEEEEECCCCCceEEEcccCC-----CC-----------------------------------------
Q 001901 245 GG-NDGKRPLADVWALDTAAKPYEWRKLEPEG-----EG----------------------------------------- 277 (998)
Q Consensus 245 GG-~~g~~~lndv~~yD~~s~~~~W~~v~~~~-----~~----------------------------------------- 277 (998)
|| .++...++++++||+.++ +|+.+.... ..
T Consensus 304 GG~~~~~~~~~~~e~yd~~t~--~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w 381 (656)
T 1k3i_A 304 GGSWSGGVFEKNGEVYSPSSK--TWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGD 381 (656)
T ss_dssp CCCCCSSSCCCCEEEEETTTT--EEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCE
T ss_pred eCcccCCcccccceEeCCCCC--cceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcce
Confidence 99 566678899999999999 999973211 10
Q ss_pred -------------CCCccceEEEE--EeCCEEEEEeccCCC--CCCcc---cEEEEecCCCCeEEEEECCCCCCCCccee
Q 001901 278 -------------PPPCMYATASA--RSDGLLLLCGGRDAS--SVPLA---SAYGLAKHRDGRWEWAIAPGVSPSPRYQH 337 (998)
Q Consensus 278 -------------P~~r~~~~a~~--~~~~~lyvfGG~~~~--~~~~~---dv~~~~~~~~~~W~w~~~~g~~P~pR~~h 337 (998)
++++..+++++ ..+++||+|||.+.. ...++ .++.|++..+ +|..... +.+|.+|..|
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~-~W~~~~~-~~mp~~R~~~ 459 (656)
T 1k3i_A 382 VKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTS-PNTVFAS-NGLYFARTFH 459 (656)
T ss_dssp EEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSC-CEEEECT-TCCSSCCBSC
T ss_pred eecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCC-CeeEEcc-CCCCCCcccC
Confidence 11123344443 258999999997431 12334 5667777655 5554432 3457999999
Q ss_pred EEEEE-CCEEEEEcccCCCCC--ccccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCCcceeEEEEE
Q 001901 338 AAVFV-NARLHVSGGALGGGR--MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAV 414 (998)
Q Consensus 338 sav~~-~~~L~V~GG~~~~~~--~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~ 414 (998)
+++++ +++|||+||.+.... .....+++++||+++++|+.+..+ +.+|.+|+++++
T Consensus 460 ~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~---------------------~~~R~~hs~a~l 518 (656)
T 1k3i_A 460 TSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPN---------------------SIVRVYHSISLL 518 (656)
T ss_dssp EEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCC---------------------SSCCCTTEEEEE
T ss_pred CeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCC---------------------CCccccccHhhc
Confidence 98888 999999999763210 113468899999999999998776 669999999888
Q ss_pred --CCEEEEEcCCC
Q 001901 415 --GDLIFIYGGLR 425 (998)
Q Consensus 415 --~~~LyVfGG~~ 425 (998)
+++|||+||..
T Consensus 519 l~dg~v~v~GG~~ 531 (656)
T 1k3i_A 519 LPDGRVFNGGGGL 531 (656)
T ss_dssp CTTSCEEEEECCC
T ss_pred CCCcEEEecCCCC
Confidence 99999999953
No 28
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=99.88 E-value=1.3e-23 Score=228.58 Aligned_cols=185 Identities=19% Similarity=0.324 Sum_probs=127.7
Q ss_pred HHHhcCCCeeeecCCeEEEecCCCCHHHHHHHHHHcCCCCC-CCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCC
Q 001901 685 RIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPST-AGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPN 763 (998)
Q Consensus 685 ~~~~~ep~~l~~~~~i~vvGDiHG~~~dL~~il~~~g~~~~-~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~ 763 (998)
.+|.++++++++..+++|||||||++.+|.++|+.++.... + .+||+|||||||++++|++.+|..+
T Consensus 6 ~~~~~~~~l~~~~~~i~visDiHg~~~~l~~~l~~~~~~~~~d------~ii~~GD~vd~g~~~~~~l~~l~~~------ 73 (262)
T 2qjc_A 6 QGYANVVTLPNVTGRVIIVGDIHGCRAQLEDLLRAVSFKQGSD------TLVAVGDLVNKGPDSFGVVRLLKRL------ 73 (262)
T ss_dssp --CCCEEECTTCCSCEEEECCCTTCHHHHHHHHHHHTCCTTTS------EEEECSCCSSSSSCHHHHHHHHHHH------
T ss_pred cccCChhhhcCCCCeEEEEeCCCCCHHHHHHHHHHHhccCCCC------EEEEecCCCCCCCCHHHHHHHHHHC------
Confidence 46788999999999999999999999999999999987643 3 7999999999999999999999875
Q ss_pred cEEEeecCccccchhhhcCChHH-HHHHhCCCcc-----hhhhhhhhhhhcccceeEEEc-CeEEEecCCccCccc----
Q 001901 764 NVHLIRGNHEAADINALFGFRIE-CIERMGERDG-----IWAWHRINRLFNWLPLAALIE-KKIICMHGGIGRSIN---- 832 (998)
Q Consensus 764 ~v~llrGNHE~~~~~~~~gf~~e-~~~~~g~~~~-----~~~~~~~~~~f~~LP~aa~i~-~~il~vHgGi~~~~~---- 832 (998)
.+++|+||||...++..+++..+ +..+++.... ..+.....++|+.||+++.++ ++++|||||+.|.+.
T Consensus 74 ~~~~v~GNHd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lP~~~~i~~~~i~~vHgg~~p~~~~~~~ 153 (262)
T 2qjc_A 74 GAYSVLGNHDAKLLKLVKKLGKKECLKGRDAKSSLAPLAQSIPTDVETYLSQLPHIIRIPAHNVMVAHAGLHPQRPVDRQ 153 (262)
T ss_dssp TCEECCCHHHHHHHHHHHCC-------------CHHHHHHHCCHHHHHHHHTCCSEEEEGGGTEEEESSCCCTTSCGGGC
T ss_pred CCEEEeCcChHHHHhhhcCCCccccccccchHHHHHHHHhhhhHHHHHHHHcCCcEEEECCCcEEEEECCCCCCCCcccC
Confidence 59999999999999888887654 3444443211 123456678888999999886 599999999988653
Q ss_pred CHHhhhhccCCcc---cCCCCcceeccccCCCCCCCCCCCcccCCCCCCceeeCHH
Q 001901 833 HVEQIENLQRPIT---MEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPD 885 (998)
Q Consensus 833 ~~~~i~~i~rp~~---~~~~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~ 885 (998)
..+++..+.+... .+..+ ..++|+||... ....|..+.||...++||+.
T Consensus 154 ~~~~l~~ir~~~~~~~~~~~G---~~~~~~d~~~~-~~~~w~~~~~g~~~vvfGHt 205 (262)
T 2qjc_A 154 YEDEVTTMRNLIEKEQEATGG---VTLTATEETND-GGKPWASMWRGPETVVFGHD 205 (262)
T ss_dssp CHHHHHHCCEEEEC----------CCEEEESCSTT-CCEEGGGGCCCSSEEEECCC
T ss_pred CHHHHhhhhhcccccccCCCC---ccccccCCCCc-CCCChhhccCCCCEEEECCC
Confidence 2333333332211 11122 14789999542 34567666666554455443
No 29
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.88 E-value=6e-22 Score=243.45 Aligned_cols=249 Identities=13% Similarity=0.110 Sum_probs=181.1
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCC-----CCcccEEEEEcCCCCCceEEeeecCC
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAG-----LSAEDLHVLDLTQQRPRWHRVVVQGP 223 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~-----~~~~dv~~~Dl~t~t~~W~~l~~~g~ 223 (998)
++..||+.+++|+.+.++ ||..|+++++ +++|||+||..... ...+++++||+.+++ |+.+. .
T Consensus 167 ~~~~~dp~~~~W~~~~~~-----P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~--w~~~~---~ 236 (656)
T 1k3i_A 167 SYTAPQPGLGRWGPTIDL-----PIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGI--VSDRT---V 236 (656)
T ss_dssp CCCCCCTTSCEEEEEEEC-----SSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCC--BCCCE---E
T ss_pred ccccCCCCCCeeeeeccC-----CCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCc--EEeCc---c
Confidence 355678889999998754 4566666766 88999999975432 134589999999984 99887 5
Q ss_pred CCCCCcccE--EEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccC
Q 001901 224 GPGPRYGHV--MALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRD 301 (998)
Q Consensus 224 ~P~~R~~hs--~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~ 301 (998)
+|.+|..|+ ++++.+++||++||.+.. ++++||+.++ +|+++.++ |.+|.+|+++++.+++||++||..
T Consensus 237 ~~~~~~~~~~~~~~~~~g~lyv~GG~~~~----~v~~yd~~t~--~W~~~~~~---~~~R~~~s~~~~~dg~iyv~GG~~ 307 (656)
T 1k3i_A 237 TVTKHDMFCPGISMDGNGQIVVTGGNDAK----KTSLYDSSSD--SWIPGPDM---QVARGYQSSATMSDGRVFTIGGSW 307 (656)
T ss_dssp EECSCCCSSCEEEECTTSCEEEECSSSTT----CEEEEEGGGT--EEEECCCC---SSCCSSCEEEECTTSCEEEECCCC
T ss_pred cCCCCCCccccccCCCCCCEEEeCCCCCC----ceEEecCcCC--ceeECCCC---CccccccceEEecCCeEEEEeCcc
Confidence 677776654 555555589999998653 8999999999 99999765 445777766666699999999954
Q ss_pred CCCCCcccEEEEecCCCCeEEEEECC---CCC------------------------------------------------
Q 001901 302 ASSVPLASAYGLAKHRDGRWEWAIAP---GVS------------------------------------------------ 330 (998)
Q Consensus 302 ~~~~~~~dv~~~~~~~~~~W~w~~~~---g~~------------------------------------------------ 330 (998)
.....+++++.|++.++ +|+..... +++
T Consensus 308 ~~~~~~~~~e~yd~~t~-~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~ 386 (656)
T 1k3i_A 308 SGGVFEKNGEVYSPSSK-TWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAG 386 (656)
T ss_dssp CSSSCCCCEEEEETTTT-EEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEE
T ss_pred cCCcccccceEeCCCCC-cceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCC
Confidence 44446889999998876 56544211 110
Q ss_pred --------CCCcceeEEEE---ECCEEEEEcccCCCCCccccCC---eEEEEECCCCeEEEcc--cCcCCCCCCCCcccc
Q 001901 331 --------PSPRYQHAAVF---VNARLHVSGGALGGGRMVEDSS---SVAVLDTAAGVWCDTK--SVVTSPRTGRYSADA 394 (998)
Q Consensus 331 --------P~pR~~hsav~---~~~~L~V~GG~~~~~~~~~~~~---dv~vyD~~t~~W~~v~--~~~~~p~~~~~~~~~ 394 (998)
+.++..++++. ++++|||+||....... ...+ .+++||+.+++|..+. .+
T Consensus 387 ~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~-~~~~~~~~v~~yd~~~~~W~~~~~~~m------------- 452 (656)
T 1k3i_A 387 KRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDS-DATTNAHIITLGEPGTSPNTVFASNGL------------- 452 (656)
T ss_dssp ECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSS-BCCCCEEEEECCSTTSCCEEEECTTCC-------------
T ss_pred ccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCC-CcCCcceEEEcCCCCCCCeeEEccCCC-------------
Confidence 01123345553 48999999997532111 1234 7999999999999886 44
Q ss_pred CCCCCccCCCCcceeEEEEE-CCEEEEEcCCCC------CCCcccEEEeccccc
Q 001901 395 AGGDAAVELTRRCRHAAAAV-GDLIFIYGGLRG------GVLLDDLLVAEDLAA 441 (998)
Q Consensus 395 ~~~~~~~~p~~R~~hsa~~~-~~~LyVfGG~~~------~~~l~Dv~~ld~~~~ 441 (998)
|.+|..|+++++ +++|||+||.+. ...+++++++|....
T Consensus 453 --------p~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~ 498 (656)
T 1k3i_A 453 --------YFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD 498 (656)
T ss_dssp --------SSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT
T ss_pred --------CCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCC
Confidence 679999999998 999999999652 356889999987553
No 30
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=99.76 E-value=6.6e-20 Score=194.30 Aligned_cols=122 Identities=27% Similarity=0.324 Sum_probs=93.3
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccch
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~ 777 (998)
.+++|||||||++.+|.++|+.++.....+ .+||+|||||||+++.|++.+|.. ..+++|+||||.+.+
T Consensus 13 ~~i~visDiHg~~~~l~~~l~~~~~~~~~d-----~~i~~GD~~~~g~~~~~~~~~l~~------~~~~~v~GNhd~~~~ 81 (221)
T 1g5b_A 13 RNIWVVGDLHGCYTNLMNKLDTIGFDNKKD-----LLISVGDLVDRGAENVECLELITF------PWFRAVRGNHEQMMI 81 (221)
T ss_dssp SCEEEECCCTTCHHHHHHHHHHHTCCTTTC-----EEEECSCCSSSSSCHHHHHGGGGS------TTEEECCCHHHHHHH
T ss_pred ceEEEEEcCCCCHHHHHHHHHHccCCCCCC-----EEEEeCCccCCCCChHHHHHHHhc------CCEEEEccCcHHHHH
Confidence 689999999999999999999998753221 789999999999999999988754 379999999999887
Q ss_pred hhhcCChHH-HHHHhCCC-------cchhhhhhhhhhhcccceeEEE---cCeEEEecCCccCc
Q 001901 778 NALFGFRIE-CIERMGER-------DGIWAWHRINRLFNWLPLAALI---EKKIICMHGGIGRS 830 (998)
Q Consensus 778 ~~~~gf~~e-~~~~~g~~-------~~~~~~~~~~~~f~~LP~aa~i---~~~il~vHgGi~~~ 830 (998)
+..+++... .+...+.. ....+++.+.++|+.||+++++ +.+++|||||+++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lP~~~~~~~~~~~i~~vHgg~~~~ 145 (221)
T 1g5b_A 82 DGLSERGNVNHWLLNGGGWFFNLDYDKEILAKALAHKADELPLIIELVSKDKKYVICHADYPFD 145 (221)
T ss_dssp HHHSTTCCCHHHHTTTGGGGGGSCHHHHHHHHHHHHHHTTCCSEEEEEETTEEEEECSSCCCSS
T ss_pred hhhccCCcHHHHHHcCCCchhhcCHHHHHHHHHHHHHHHhCCcEEEEEecCCeEEEEecCCChh
Confidence 765433211 12222211 1123557788999999999877 57999999999765
No 31
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=99.43 E-value=5.7e-13 Score=143.27 Aligned_cols=189 Identities=19% Similarity=0.157 Sum_probs=125.7
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccch
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~ 777 (998)
.++.++|||||++.+|.++++.+. ..+ .++++||++|+|+++.|++.+|..++ .+++++||||....
T Consensus 4 mri~~isDiHg~~~~l~~~l~~~~--~~d------~ii~~GDl~~~g~~~~~~~~~l~~~~-----~~~~v~GNhD~~~~ 70 (246)
T 3rqz_A 4 MRILIISDVHANLVALEAVLSDAG--RVD------DIWSLGDIVGYGPRPRECVELVRVLA-----PNISVIGNHDWACI 70 (246)
T ss_dssp CCEEEECCCTTCHHHHHHHHHHHC--SCS------EEEECSCCSSSSSCHHHHHHHHHHHC-----SSEECCCHHHHHHT
T ss_pred cEEEEEeecCCCHHHHHHHHHhcc--CCC------EEEECCCcCCCCCCHHHHHHHHHhcC-----CCEEEeCchHHHHh
Confidence 579999999999999999999987 222 79999999999999999999999984 37999999998776
Q ss_pred hhhcC--Ch---HHHHHHhCCCcchhhhhhhhhhhcccceeEEEcCeEEEecCCccCcccCHHhhhhccCCcccCCCCcc
Q 001901 778 NALFG--FR---IECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIV 852 (998)
Q Consensus 778 ~~~~g--f~---~e~~~~~g~~~~~~~~~~~~~~f~~LP~aa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~ 852 (998)
..... +. .+... + ....+.....+++..||.....+ +++++||++....
T Consensus 71 ~~~~~~~~~~~~~~~~~-~---~~~~l~~~~~~~L~~lp~~~~~~-~i~~~Hg~p~~~~--------------------- 124 (246)
T 3rqz_A 71 GRLSLDEFNPVARFASY-W---TTMQLQAEHLQYLESLPNRMIDG-DWTVVHGSPRHPI--------------------- 124 (246)
T ss_dssp CCCCCC--CGGGGCHHH-H---HHHHCCHHHHHHHHHCCSEEEET-TEEEESSCSSSTT---------------------
T ss_pred ccCCccccCHHHHHHHH-H---HHHHcCHHHHHHHHhCCcEEEEC-CEEEEECCcCCcc---------------------
Confidence 54322 10 00000 0 01123355667888999886655 8999999864210
Q ss_pred eeccccCCCCCCCCCCCcccCCCCCCceeeCHHHHHHHHHHcCCcEEEEcccccccceEE--------------------
Q 001901 853 LMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFER-------------------- 912 (998)
Q Consensus 853 ~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~-------------------- 912 (998)
| . +.+....+.+.++..+.+++|-||.=.+..+..
T Consensus 125 -----~----~----------------~~~~~~~~~~~l~~~~~~l~i~GHtH~p~~~~~~~~~~~~~~~~~~~~~~~~l 179 (246)
T 3rqz_A 125 -----W----E----------------YIYNARIAALNFPAFDTPLCFVGHTHVPLYIREDEALSNVAPHHPNDGEVLDV 179 (246)
T ss_dssp -----T----C----------------CCCSHHHHHHHGGGCCSSEEECCSSSSEEEEEHHHHHTTCCCBCCCTTCEEEC
T ss_pred -----c----c----------------ccCChHHHHHHHhccCCCEEEECCcCcccEEEecccccccccccccccceeec
Confidence 0 0 112345566777888899999999876544331
Q ss_pred ecCCeEEEEeccccccCCCCCeEEEEEEcCC-ceEEeEEe
Q 001901 913 FAQGHLITLFSATNYCGTANNAGAILVLGRD-LVVVPKLI 951 (998)
Q Consensus 913 ~~~~~~iTvfSa~~y~~~~~n~ga~l~~~~~-~~~~~~~~ 951 (998)
..+..+|..=|.-.-- .....+++++++.+ ..++++.+
T Consensus 180 ~~g~~ivNpGSVG~Pr-dg~p~A~Y~i~d~~~~~v~~~rv 218 (246)
T 3rqz_A 180 SSGRYIINPGAVGQPR-DGDPRASYAIFEPDAQRVTFHRV 218 (246)
T ss_dssp SSSCEEEEECCSSCCC-SSCCSEEEEEEEGGGTEEEEEEE
T ss_pred CCCeEEEECCccCCCC-CcCCcceEEEEECCCCEEEEEEe
Confidence 1134455555542211 13456888888754 34555444
No 32
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=99.37 E-value=6e-12 Score=135.43 Aligned_cols=199 Identities=11% Similarity=0.041 Sum_probs=121.6
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcC---CC--CCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCc
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYG---SP--STAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNH 772 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g---~~--~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNH 772 (998)
.++.+||||||++..|.++++.+. .. ..+ .+|++||++|+|+++.|++.+|..|+... .+++++|||
T Consensus 2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d------~ii~~GD~~~~g~~~~~~~~~l~~l~~~~--~~~~v~GNh 73 (252)
T 1nnw_A 2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIE------KYYILGNIVGLFPYPKEVIEVIKDLTKKE--NVKIIRGKY 73 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEE------EEEEESCSSSSSSCHHHHHHHHHHHHHHS--CEEEECCHH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCC------EEEEeCccCCCCCCHHHHHHHHHhhHhhc--CeeEEecch
Confidence 468999999999999999998765 32 112 79999999999999999999999987543 499999999
Q ss_pred cccchhhhcCCh-----------HHHHHHhCCCcchhhhhhhhhhhcccceeEEE--cC-eEEEecCCccCcccCHHhhh
Q 001901 773 EAADINALFGFR-----------IECIERMGERDGIWAWHRINRLFNWLPLAALI--EK-KIICMHGGIGRSINHVEQIE 838 (998)
Q Consensus 773 E~~~~~~~~gf~-----------~e~~~~~g~~~~~~~~~~~~~~f~~LP~aa~i--~~-~il~vHgGi~~~~~~~~~i~ 838 (998)
|.........+. ......+ ......+-....++++.||....+ ++ +|+++||++....
T Consensus 74 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~L~~lp~~~~~~~~~~~i~~~H~~p~~~~------- 145 (252)
T 1nnw_A 74 DQIIAMSDPHATDPGYIDKLELPGHVKKAL-KFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSPINPF------- 145 (252)
T ss_dssp HHHHHHSCTTCSSSGGGGGSSCCHHHHHHH-HHHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEESSCSSCTT-------
T ss_pred HHHhhccccccCCcccccchhhhHHHHHHH-HHHHHHCCHHHHHHHHhCCceEEEeeCCcEEEEEcCCCCCCc-------
Confidence 987654321110 0000000 000111234455778888887654 33 8999999862110
Q ss_pred hccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCCceeeCHHHHHHHHHHc-CCcEEEEcccccccceEEecCCe
Q 001901 839 NLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNN-DLQLIVRAHECVMDGFERFAQGH 917 (998)
Q Consensus 839 ~i~rp~~~~~~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~-~l~~iiR~H~~~~~G~~~~~~~~ 917 (998)
. +.+|. . -+.+.+.++++.. +.+++|-||.-....... ++.
T Consensus 146 ----------~-----~~~~~-------------~--------~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~~--~~~ 187 (252)
T 1nnw_A 146 ----------D-----GEVLA-------------E--------QPTSYYEAIMRPVKDYEMLIVASPMYPVDAMT--RYG 187 (252)
T ss_dssp ----------T-----CCCCS-------------S--------CCHHHHHHHHGGGTTSSEEEESTTCSEEEEEE--TTE
T ss_pred ----------c-----cccCC-------------C--------CCHHHHHHHHhcCCCCCEEEECCccccceEec--CCe
Confidence 0 00110 0 1235677788887 999999999987554432 453
Q ss_pred E-EEEeccccccCCCCCeEEEEEEcC-CceEEeEEe
Q 001901 918 L-ITLFSATNYCGTANNAGAILVLGR-DLVVVPKLI 951 (998)
Q Consensus 918 ~-iTvfSa~~y~~~~~n~ga~l~~~~-~~~~~~~~~ 951 (998)
+ |..=| ..+.-.....+++++++- +..+.+..+
T Consensus 188 ~~in~Gs-~~~~~~~~~~~~y~il~~~~~~v~~~~v 222 (252)
T 1nnw_A 188 RVVCPGS-VGFPPGKEHKATFALVDVDTLKPKFIEV 222 (252)
T ss_dssp EEEEECC-SSSCSSSSCCEEEEEEETTTCCEEEEEE
T ss_pred EEEECCC-ccCCCCCCCcceEEEEECCCCeEEEEEe
Confidence 3 22212 111111122567777754 355555444
No 33
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=99.32 E-value=5.9e-12 Score=137.20 Aligned_cols=119 Identities=16% Similarity=0.087 Sum_probs=87.0
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccch
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~ 777 (998)
.+|.||+||||++..|.++|+.+.....+ .+||+||+|++|+++.||+.+|.+++ .+++++||||...+
T Consensus 12 ~~i~~iSDiHg~~~~l~~vl~~~~~~~~D------~ii~~GDlv~~g~~~~~~~~~l~~~~-----~~~~v~GNhD~~~~ 80 (270)
T 3qfm_A 12 TKIALLSDIHGNTTALEAVLADARQLGVD------EYWLLGDILMPGTGRRRILDLLDQLP-----ITARVLGNWEDSLW 80 (270)
T ss_dssp EEEEEECCCTTCHHHHHHHHHHHHHTTCC------EEEECSCCSSSSSCSHHHHHHHHTSC-----EEEECCCHHHHHHH
T ss_pred cEEEEEecCCCCHHHHHHHHHHHHhcCCC------EEEEcCCCCCCCCCHHHHHHHHHccC-----CEEEEcCChHHHHH
Confidence 36899999999999999999987644333 79999999999999999999998873 58999999999877
Q ss_pred hhhc---CChHHHHHHhC---CCcchhhhhhhhhhhcccceeEEE--c-CeEEEecCCc
Q 001901 778 NALF---GFRIECIERMG---ERDGIWAWHRINRLFNWLPLAALI--E-KKIICMHGGI 827 (998)
Q Consensus 778 ~~~~---gf~~e~~~~~g---~~~~~~~~~~~~~~f~~LP~aa~i--~-~~il~vHgGi 827 (998)
.... +|.......+. ......+.....++++.||....+ + .+|+++||-.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~L~~LP~~~~~~~~g~~i~lvHg~p 139 (270)
T 3qfm_A 81 HGVRKELDSTRPSQRYLLRQCQYVLEEISLEEIEVLHNQPLQIHRQFGDLTVGISHHLP 139 (270)
T ss_dssp HHHTTCSCTTSHHHHHHHHHHHHHHTTSCHHHHHHHHSCCSEEEEEETTEEEEEESSBT
T ss_pred HhhccccCCCcHHHHHHHHHHHHHHHHcCHHHHHHHHhCCCceEEEECCcEEEEEECCC
Confidence 6433 33222111100 001122445667889999998755 3 3899999654
No 34
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=98.65 E-value=4e-08 Score=102.64 Aligned_cols=69 Identities=19% Similarity=0.374 Sum_probs=56.7
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCC--------ChHHHHHHHHHhhhcCCCcEEEee
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQ--------HSLETITLLLALKVEYPNNVHLIR 769 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~--------~s~evl~ll~~lk~~~p~~v~llr 769 (998)
.++.+++|+||++..|.++++.+.....+ .+|++||++|+|+ ...+++.+|..++ ..+++++
T Consensus 26 mki~~iSD~H~~~~~l~~~l~~~~~~~~d------~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~~----~~v~~V~ 95 (208)
T 1su1_A 26 MKLMFASDIHGSLPATERVLELFAQSGAQ------WLVILGDVLNHGPRNALPEGYAPAKVVERLNEVA----HKVIAVR 95 (208)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHHTCS------EEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTG----GGEEECC
T ss_pred EEEEEEEcCCCCHHHHHHHHHHHHhcCCC------EEEECCCccccCcccccccccCHHHHHHHHHhcC----CceEEEE
Confidence 57999999999999999998876422222 7999999999998 4688999988875 3699999
Q ss_pred cCccccc
Q 001901 770 GNHEAAD 776 (998)
Q Consensus 770 GNHE~~~ 776 (998)
||||...
T Consensus 96 GNHD~~~ 102 (208)
T 1su1_A 96 GNCDSEV 102 (208)
T ss_dssp CTTCCHH
T ss_pred CCCchHH
Confidence 9999854
No 35
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=98.61 E-value=6.5e-07 Score=91.97 Aligned_cols=65 Identities=18% Similarity=0.323 Sum_probs=50.6
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccch
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~ 777 (998)
.++.+++|+||++..|.++++.+.....+ .+|++||++|. +++..|..+ +..+++++||||....
T Consensus 26 m~i~~iSD~Hg~~~~l~~~l~~~~~~~~D------~ii~~GDl~~~-----~~~~~l~~l----~~~~~~V~GNhD~~~~ 90 (190)
T 1s3l_A 26 MKIGIMSDTHDHLPNIRKAIEIFNDENVE------TVIHCGDFVSL-----FVIKEFENL----NANIIATYGNNDGERC 90 (190)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHSCCS------EEEECSCCCST-----HHHHHGGGC----SSEEEEECCTTCCCHH
T ss_pred eEEEEEeeCCCCHHHHHHHHHHHhhcCCC------EEEECCCCCCH-----HHHHHHHhc----CCCEEEEeCCCcchHH
Confidence 57999999999999999999876432222 68999999984 566666543 3479999999998654
No 36
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=98.55 E-value=1e-06 Score=92.25 Aligned_cols=72 Identities=11% Similarity=0.137 Sum_probs=53.6
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccccc
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAAD 776 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~ 776 (998)
.+|.+++|+|+++..|.++++.+.....+ -+|++||++|+|...-++..++-.|+.. +..+++++||||...
T Consensus 6 mri~~iSD~H~~~~~~~~~~~~~~~~~~D------~vi~~GDl~~~~~~~~~~~~~~~~l~~~-~~pv~~v~GNHD~~~ 77 (228)
T 1uf3_A 6 RYILATSNPMGDLEALEKFVKLAPDTGAD------AIALIGNLMPKAAKSRDYAAFFRILSEA-HLPTAYVPGPQDAPI 77 (228)
T ss_dssp CEEEEEECCTTCHHHHHHHHTHHHHHTCS------EEEEESCSSCTTCCHHHHHHHHHHHGGG-CSCEEEECCTTSCSH
T ss_pred EEEEEEeeccCCHHHHHHHHHHHhhcCCC------EEEECCCCCCCCCCHHHHHHHHHHHHhc-CCcEEEECCCCCchh
Confidence 57999999999999988888765321122 6899999999997665555555555432 345999999999854
No 37
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=98.32 E-value=3.4e-07 Score=93.13 Aligned_cols=62 Identities=23% Similarity=0.258 Sum_probs=48.8
Q ss_pred CCeEEEecCCC--CHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCcccc
Q 001901 698 APIKIFGDLHG--QFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAA 775 (998)
Q Consensus 698 ~~i~vvGDiHG--~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~ 775 (998)
.++.+++|+|| +...|.++++.+. ...+ .+|++||++|+ +++.+|..+. ..+++++||||..
T Consensus 23 mri~~iSD~Hg~~~~~~l~~~l~~~~-~~~D------~ii~~GD~~~~-----~~~~~l~~~~----~~v~~V~GNhD~~ 86 (178)
T 2kkn_A 23 KRFLLISDSHVPVRMASLPDEILNSL-KEYD------GVIGLGDYVDL-----DTVILLEKFS----KEFYGVHGNMDYP 86 (178)
T ss_dssp EEEEEECCCCBTTTTCCCCHHHHHGG-GGCS------EEEESSCBSCH-----HHHHHHHHHT----SSEEECCCSSSCG
T ss_pred eEEEEEecccCCCCHHHHHHHHHHHh-cCCC------EEEECCCCCCH-----HHHHHHHhcC----CCEEEEECCCCcH
Confidence 47999999997 7778888887753 2222 68999999984 7888888763 3699999999975
No 38
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=98.30 E-value=1.6e-05 Score=83.23 Aligned_cols=119 Identities=22% Similarity=0.348 Sum_probs=78.7
Q ss_pred CCeEEEecCCCCHH------HHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecC
Q 001901 698 APIKIFGDLHGQFG------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGN 771 (998)
Q Consensus 698 ~~i~vvGDiHG~~~------dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGN 771 (998)
.++.+++|+|+++. .|.++++. ...+ .+|++||++| .+++.+|..+. ..+++++||
T Consensus 26 m~i~~iSD~H~~~~~~~l~~~l~~~~~~---~~~D------~vi~~GDl~~-----~~~l~~l~~~~----~~v~~V~GN 87 (215)
T 2a22_A 26 DLVLLIGDLKIPYGAKELPSNFRELLAT---DKIN------YVLCTGNVCS-----QEYVEMLKNIT----KNVYIVSGD 87 (215)
T ss_dssp EEEEEECCCCTTTTCSSCCGGGHHHHHC---TTCC------EEEECSCCCC-----HHHHHHHHHHC----SCEEECCCT
T ss_pred cEEEEEecCCCCCChHHHHHHHHHHHhc---CCCC------EEEECCCCCC-----HHHHHHHHHcC----CCEEEecCC
Confidence 57999999999863 33334331 1122 6899999998 57888877763 369999999
Q ss_pred ccccchhhhcCChHHHHHHhCCCcchhhhhhhhhhhcccceeEEE--c-CeEEEecCCccCcccCHHhhhhccCCcccCC
Q 001901 772 HEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALI--E-KKIICMHGGIGRSINHVEQIENLQRPITMEA 848 (998)
Q Consensus 772 HE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LP~aa~i--~-~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~ 848 (998)
||....... .+++..||....+ + .+|+++||.... |
T Consensus 88 HD~~~~~~~-----------------------~~~~~~lp~~~~~~~~~~~i~l~Hg~~~~-------------~----- 126 (215)
T 2a22_A 88 LDSAIFNPD-----------------------PESNGVFPEYVVVQIGEFKIGLMHGNQVL-------------P----- 126 (215)
T ss_dssp TCCSCCBCC-----------------------GGGTBCCCSEEEEEETTEEEEEECSTTSS-------------S-----
T ss_pred CcCcccccC-----------------------hhhHhhCCceEEEecCCeEEEEEcCCccC-------------C-----
Confidence 998654310 0123456654333 2 389999986411 0
Q ss_pred CCcceeccccCCCCCCCCCCCcccCCCCCCceeeCHHHHHHHHHHcCCcEEEEcccccc
Q 001901 849 GSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVM 907 (998)
Q Consensus 849 ~~~~~~dlLWsDP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~ 907 (998)
| .+.+.+.++++..+.++++-||.-..
T Consensus 127 ---------~-----------------------~~~~~l~~~~~~~~~d~vl~GHtH~~ 153 (215)
T 2a22_A 127 ---------W-----------------------DDPGSLEQWQRRLDCDILVTGHTHKL 153 (215)
T ss_dssp ---------T-----------------------TCHHHHHHHHHHHTCSEEEECSSCCC
T ss_pred ---------C-----------------------CCHHHHHHHHhhcCCCEEEECCcCCC
Confidence 0 13456677788889999999998653
No 39
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=98.27 E-value=4.5e-06 Score=84.44 Aligned_cols=58 Identities=19% Similarity=0.235 Sum_probs=43.2
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCcccc
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAA 775 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~ 775 (998)
.++.+++|+||++..|.++++.+.. ..+ .++++||+.- +++. .++ ..+++++||||..
T Consensus 7 m~i~~isD~H~~~~~~~~~~~~~~~-~~d------~i~~~GD~~~------~~l~---~l~----~~~~~v~GNhD~~ 64 (176)
T 3ck2_A 7 QTIIVMSDSHGDSLIVEEVRDRYVG-KVD------AVFHNGDSEL------RPDS---PLW----EGIRVVKGNMDFY 64 (176)
T ss_dssp EEEEEECCCTTCHHHHHHHHHHHTT-TSS------EEEECSCCCS------CTTC---GGG----TTEEECCCTTCCS
T ss_pred cEEEEEecCCCCHHHHHHHHHHhhc-CCC------EEEECCCCch------HHHH---hhh----CCeEEecCcccch
Confidence 4699999999999999999998753 222 6899999731 2222 221 2699999999975
No 40
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=98.17 E-value=5.3e-06 Score=85.31 Aligned_cols=69 Identities=19% Similarity=0.246 Sum_probs=48.2
Q ss_pred CCeEEEecCCCCHHHH-------------HHHHHHcCC--CCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCC
Q 001901 698 APIKIFGDLHGQFGDL-------------MRLFDEYGS--PSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYP 762 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL-------------~~il~~~g~--~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p 762 (998)
.++.+++|+|+....+ .++++.+.. ...+ .+|++||++++|+...+++.+|..+.
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D------~vi~~GDl~~~~~~~~~~~~~l~~l~---- 71 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPED------TLYHLGDFTWHFNDKNEYLRIWKALP---- 71 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTC------EEEECSCCBSCSCCTTSHHHHHHHSS----
T ss_pred cEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCC------EEEECCCCCCCchhHHHHHHHHHHCC----
Confidence 5789999999644322 223333221 1222 68999999999977778888887763
Q ss_pred CcEEEeecCccccc
Q 001901 763 NNVHLIRGNHEAAD 776 (998)
Q Consensus 763 ~~v~llrGNHE~~~ 776 (998)
..+++++||||...
T Consensus 72 ~~~~~v~GNhD~~~ 85 (195)
T 1xm7_A 72 GRKILVMGNHDKDK 85 (195)
T ss_dssp SEEEEECCTTCCCH
T ss_pred CCEEEEeCCCCCch
Confidence 35999999999854
No 41
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=97.96 E-value=6.6e-05 Score=83.10 Aligned_cols=71 Identities=18% Similarity=0.280 Sum_probs=47.2
Q ss_pred CCeEEEecCCC------------CHHHHHHHHHHcCC--CCCCCCccceeEEEeccccCCCCCh-HH-HHHHHHHhhhcC
Q 001901 698 APIKIFGDLHG------------QFGDLMRLFDEYGS--PSTAGDIAYIDYLFLGDYVDRGQHS-LE-TITLLLALKVEY 761 (998)
Q Consensus 698 ~~i~vvGDiHG------------~~~dL~~il~~~g~--~~~~~~~~~~~~vfLGDyVDRG~~s-~e-vl~ll~~lk~~~ 761 (998)
.+|.+++|+|. ....|.++++.+.. ...+ -+|++||++|.|... .+ +..+|-.|....
T Consensus 26 ~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d------~vi~~GDl~~~~~~~~~~~~~~~l~~l~~~~ 99 (330)
T 3ib7_A 26 YVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPD------AIVFTGDLADKGEPAAYRKLRGLVEPFAAQL 99 (330)
T ss_dssp EEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCS------EEEECSCCBTTCCHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCC------EEEECCCCCCCCCHHHHHHHHHHHHHHHhhc
Confidence 46999999996 26677777776642 2222 688999999998742 22 223333332222
Q ss_pred CCcEEEeecCccc
Q 001901 762 PNNVHLIRGNHEA 774 (998)
Q Consensus 762 p~~v~llrGNHE~ 774 (998)
.-.+++++||||.
T Consensus 100 ~~pv~~v~GNHD~ 112 (330)
T 3ib7_A 100 GAELVWVMGNHDD 112 (330)
T ss_dssp TCEEEECCCTTSC
T ss_pred CCCEEEeCCCCCC
Confidence 3459999999997
No 42
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=97.93 E-value=1.3e-05 Score=82.14 Aligned_cols=64 Identities=23% Similarity=0.366 Sum_probs=43.9
Q ss_pred CCeEEEecCCCCHH--HHHHHHHH-cCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccc
Q 001901 698 APIKIFGDLHGQFG--DLMRLFDE-YGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEA 774 (998)
Q Consensus 698 ~~i~vvGDiHG~~~--dL~~il~~-~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~ 774 (998)
.++.+++|+|++.. ++.+.|.. +.....+ .+|++||++| .+++.+|..+. ..+++++||||.
T Consensus 11 m~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d------~ii~~GDl~~-----~~~~~~l~~~~----~~~~~v~GNhD~ 75 (192)
T 1z2w_A 11 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQ------HILCTGNLCT-----KESYDYLKTLA----GDVHIVRGDFDE 75 (192)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCS------EEEECSCCBS-----HHHHHHHHHHC----SEEEECCCTTCC
T ss_pred eEEEEEecCCCCccchhHHHHHHHHhccCCCC------EEEEcCCCCC-----HHHHHHHHhcC----CCEEEEcCCcCc
Confidence 57999999999742 23333322 2211112 6889999997 67888877663 369999999997
Q ss_pred cc
Q 001901 775 AD 776 (998)
Q Consensus 775 ~~ 776 (998)
..
T Consensus 76 ~~ 77 (192)
T 1z2w_A 76 NL 77 (192)
T ss_dssp CT
T ss_pred cc
Confidence 54
No 43
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=97.87 E-value=7.3e-06 Score=87.78 Aligned_cols=73 Identities=8% Similarity=0.096 Sum_probs=51.9
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCCh--------------------------HHHH
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS--------------------------LETI 751 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s--------------------------~evl 751 (998)
.+|.+++|||+++..|.++++.+.....+ -+|++||++|+|..+ -+..
T Consensus 6 mri~~iSDlH~~~~~~~~~l~~~~~~~~D------~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 79 (260)
T 2yvt_A 6 RKVLAIKNFKERFDLLPKLKGVIAEKQPD------ILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLD 79 (260)
T ss_dssp CEEEEEECCTTCGGGHHHHHHHHHHHCCS------EEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred EEEEEEeecCCChHHHHHHHHHHHhcCCC------EEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHH
Confidence 57999999999999998888776322222 689999999999652 1233
Q ss_pred HHHHHhhhcCCCcEEEeecCccccch
Q 001901 752 TLLLALKVEYPNNVHLIRGNHEAADI 777 (998)
Q Consensus 752 ~ll~~lk~~~p~~v~llrGNHE~~~~ 777 (998)
.+|-.|+. .+..+++++||||....
T Consensus 80 ~~l~~l~~-~~~pv~~v~GNHD~~~~ 104 (260)
T 2yvt_A 80 KFFREIGE-LGVKTFVVPGKNDAPLK 104 (260)
T ss_dssp HHHHHHHT-TCSEEEEECCTTSCCHH
T ss_pred HHHHHHHh-cCCcEEEEcCCCCchhh
Confidence 34444433 23469999999998643
No 44
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=97.19 E-value=0.00053 Score=73.52 Aligned_cols=67 Identities=19% Similarity=0.234 Sum_probs=46.3
Q ss_pred CeEEEecCCCCH------------HHHHHHHHHcCCC--CCCCCccceeEEEeccccCCCCCh-H-HHHHHHHHhhhcCC
Q 001901 699 PIKIFGDLHGQF------------GDLMRLFDEYGSP--STAGDIAYIDYLFLGDYVDRGQHS-L-ETITLLLALKVEYP 762 (998)
Q Consensus 699 ~i~vvGDiHG~~------------~dL~~il~~~g~~--~~~~~~~~~~~vfLGDyVDRG~~s-~-evl~ll~~lk~~~p 762 (998)
+|.+++|+|+.. ..|.++++.+... ..+ -+|++||+++.|... . ++..+|..| +
T Consensus 2 ri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d------~vi~~GDl~~~~~~~~~~~~~~~l~~l----~ 71 (274)
T 3d03_A 2 LLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPD------AVVVSGDIVNCGRPEEYQVARQILGSL----N 71 (274)
T ss_dssp EEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCS------EEEEESCCBSSCCHHHHHHHHHHHTTC----S
T ss_pred EEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCC------EEEECCCCCCCCCHHHHHHHHHHHHhc----C
Confidence 589999999984 6788888776432 112 688999999998743 1 222222222 3
Q ss_pred CcEEEeecCcccc
Q 001901 763 NNVHLIRGNHEAA 775 (998)
Q Consensus 763 ~~v~llrGNHE~~ 775 (998)
-.+++++||||..
T Consensus 72 ~p~~~v~GNHD~~ 84 (274)
T 3d03_A 72 YPLYLIPGNHDDK 84 (274)
T ss_dssp SCEEEECCTTSCH
T ss_pred CCEEEECCCCCCH
Confidence 3599999999984
No 45
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=97.08 E-value=0.00045 Score=75.38 Aligned_cols=63 Identities=24% Similarity=0.263 Sum_probs=43.1
Q ss_pred CCeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCCh--HHHHHHHHHhhhcCCCcEEEeecCcccc
Q 001901 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS--LETITLLLALKVEYPNNVHLIRGNHEAA 775 (998)
Q Consensus 698 ~~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s--~evl~ll~~lk~~~p~~v~llrGNHE~~ 775 (998)
.+|++++|+||+...| .++..+ -+|++||++|+|... .+++.+|..+. + ..++++.||||..
T Consensus 60 mri~~iSD~H~~~~~l-------~i~~~D------~vi~aGDl~~~g~~~e~~~~~~~L~~l~--~-~~v~~V~GNHD~~ 123 (296)
T 3rl5_A 60 TRFVCISDTRSRTDGI-------QMPYGD------ILLHTGDFTELGLPSEVKKFNDWLGNLP--Y-EYKIVIAGNHELT 123 (296)
T ss_dssp EEEEEEBCCTTCCTTC-------CCCSCS------EEEECSCCSSSCCHHHHHHHHHHHHTSC--C-SEEEECCCTTCGG
T ss_pred eEEEEEeeCCCCcchh-------ccCCCC------EEEECCcccCCCCHHHHHHHHHHHHhCC--C-CeEEEEcCCcccc
Confidence 4799999999997643 223322 688999999999742 22344444332 1 2489999999985
Q ss_pred c
Q 001901 776 D 776 (998)
Q Consensus 776 ~ 776 (998)
.
T Consensus 124 ~ 124 (296)
T 3rl5_A 124 F 124 (296)
T ss_dssp G
T ss_pred c
Confidence 3
No 46
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.01 E-value=0.12 Score=54.62 Aligned_cols=185 Identities=17% Similarity=0.100 Sum_probs=116.1
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeC
Q 001901 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (998)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG 192 (998)
++.||+-.|..+. +.+..+|+.+++-..-... |..-.+.+++..+++||+...
T Consensus 30 ~~~LyestG~~g~------------------------S~v~~vD~~tgkv~~~~~l---~~~~fgeGi~~~~~~ly~ltw 82 (243)
T 3mbr_X 30 RGHLYESTGETGR------------------------SSVRKVDLETGRILQRAEV---PPPYFGAGIVAWRDRLIQLTW 82 (243)
T ss_dssp TTEEEEEECCTTS------------------------CEEEEEETTTCCEEEEEEC---CTTCCEEEEEEETTEEEEEES
T ss_pred CCEEEEECCCCCC------------------------ceEEEEECCCCCEEEEEeC---CCCcceeEEEEeCCEEEEEEe
Confidence 6799999996543 3788999999886655444 444567888999999999865
Q ss_pred CCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcc
Q 001901 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (998)
Q Consensus 193 ~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~ 272 (998)
. .+.+++||..+.. .+. ..+.+..+.+++.-++ .||+.=| .+.++.+|+.+.. .-..+.
T Consensus 83 ~------~~~v~v~D~~tl~----~~~---ti~~~~~Gwglt~dg~-~L~vSdg------s~~l~~iDp~t~~-~~~~I~ 141 (243)
T 3mbr_X 83 R------NHEGFVYDLATLT----PRA---RFRYPGEGWALTSDDS-HLYMSDG------TAVIRKLDPDTLQ-QVGSIK 141 (243)
T ss_dssp S------SSEEEEEETTTTE----EEE---EEECSSCCCEEEECSS-CEEEECS------SSEEEEECTTTCC-EEEEEE
T ss_pred e------CCEEEEEECCcCc----EEE---EEeCCCCceEEeeCCC-EEEEECC------CCeEEEEeCCCCe-EEEEEE
Confidence 3 3689999998852 222 2233345677765554 7888654 3579999999873 112222
Q ss_pred cCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCC--------cceeEEEEE--
Q 001901 273 PEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSP--------RYQHAAVFV-- 342 (998)
Q Consensus 273 ~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~p--------R~~hsav~~-- 342 (998)
.. ..+.+-..--.....+++||+--- ..+++..+|+.+...-.|..+.+..|.. -.-.+.+..
T Consensus 142 V~-~~g~~~~~lNeLe~~~G~lyanvw------~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~ 214 (243)
T 3mbr_X 142 VT-AGGRPLDNLNELEWVNGELLANVW------LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAE 214 (243)
T ss_dssp CE-ETTEECCCEEEEEEETTEEEEEET------TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETT
T ss_pred Ec-cCCcccccceeeEEeCCEEEEEEC------CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCC
Confidence 21 111111222223345889886532 2467888888876566777777543221 133445554
Q ss_pred CCEEEEEccc
Q 001901 343 NARLHVSGGA 352 (998)
Q Consensus 343 ~~~L~V~GG~ 352 (998)
+++|||.|=.
T Consensus 215 ~~~lfVTGK~ 224 (243)
T 3mbr_X 215 HDRLFVTGKR 224 (243)
T ss_dssp TTEEEEEETT
T ss_pred CCEEEEECCC
Confidence 4789998754
No 47
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=96.93 E-value=0.00065 Score=75.77 Aligned_cols=77 Identities=25% Similarity=0.303 Sum_probs=46.4
Q ss_pred Ceeeec-CCeEEEecCC-C----C-----------HHHHHHHHHHcCCCCCCCCccceeEEEecc-ccCCCCChHHH---
Q 001901 692 SVLQLK-APIKIFGDLH-G----Q-----------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGD-YVDRGQHSLET--- 750 (998)
Q Consensus 692 ~~l~~~-~~i~vvGDiH-G----~-----------~~dL~~il~~~g~~~~~~~~~~~~~vfLGD-yVDRG~~s~ev--- 750 (998)
-++... .+++.++|+| | . ...|.++++.+.-...+ -+|+.|| ++|++..+.+.
T Consensus 12 ~~~~~~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D------~vliaGD~l~d~~~~~~~~~~~ 85 (336)
T 2q8u_A 12 HVINLKELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVD------LILLTGDLLHSRNNPSVVALHD 85 (336)
T ss_dssp CCTTCCEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCS------EEEEESCSBSCSSCCCHHHHHH
T ss_pred hheecCceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCC------EEEECCccccCCCCCCHHHHHH
Confidence 344443 5799999999 8 3 34455555544221222 5889999 99999877664
Q ss_pred -HHHHHHhhhcCCCcEEEeecCccccc
Q 001901 751 -ITLLLALKVEYPNNVHLIRGNHEAAD 776 (998)
Q Consensus 751 -l~ll~~lk~~~p~~v~llrGNHE~~~ 776 (998)
..+|..|+.. -.|+++.||||...
T Consensus 86 ~~~~l~~L~~~--~pv~~i~GNHD~~~ 110 (336)
T 2q8u_A 86 LLDYLKRMMRT--APVVVLPGNHDWKG 110 (336)
T ss_dssp HHHHHHHHHHH--SCEEECCC------
T ss_pred HHHHHHHHHhc--CCEEEECCCCCccc
Confidence 4455555432 35999999999865
No 48
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=96.91 E-value=0.00043 Score=75.80 Aligned_cols=72 Identities=19% Similarity=0.179 Sum_probs=48.0
Q ss_pred CCeEEEecCCCCH-------------------HHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCC----hHHHHHHH
Q 001901 698 APIKIFGDLHGQF-------------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQH----SLETITLL 754 (998)
Q Consensus 698 ~~i~vvGDiHG~~-------------------~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~----s~evl~ll 754 (998)
.++.+++|+|... ..|.++++.+.....+ -+|++||++|.|.. ..+.+..+
T Consensus 6 ~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d------~vi~~GD~~~~~~~~~~~~~~~~~~~ 79 (322)
T 2nxf_A 6 FTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQ------CVVQLGDIIDGHNRRRDASDRALDTV 79 (322)
T ss_dssp EEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCS------EEEECSCCBCTHHHHTTCHHHHHHHH
T ss_pred eEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCC------EEEECCCccCCCCCcchHHHHHHHHH
Confidence 3589999999875 5566666655322222 68999999998751 23444434
Q ss_pred HHhhhcCCCcEEEeecCcccc
Q 001901 755 LALKVEYPNNVHLIRGNHEAA 775 (998)
Q Consensus 755 ~~lk~~~p~~v~llrGNHE~~ 775 (998)
+.+-...+..++++.||||..
T Consensus 80 ~~~l~~~~~p~~~v~GNHD~~ 100 (322)
T 2nxf_A 80 MAELDACSVDVHHVWGNHEFY 100 (322)
T ss_dssp HHHHHTTCSEEEECCCHHHHH
T ss_pred HHHHHhcCCcEEEecCCCCcc
Confidence 333333455799999999985
No 49
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=96.80 E-value=0.0013 Score=74.94 Aligned_cols=72 Identities=15% Similarity=0.148 Sum_probs=48.7
Q ss_pred CCeEEEecCCCCH-------------HHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHH----HHHHHHhhhc
Q 001901 698 APIKIFGDLHGQF-------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLET----ITLLLALKVE 760 (998)
Q Consensus 698 ~~i~vvGDiHG~~-------------~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~ev----l~ll~~lk~~ 760 (998)
.+|.+++|+|+.. ..|.++++.+.....+ -+|+.||++|++..+.+. +.+|..|+.
T Consensus 21 mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D------~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~- 93 (386)
T 3av0_A 21 MMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPD------VVLHSGDLFNDLRPPVKALRIAMQAFKKLHE- 93 (386)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCS------EEEECSCSBSSSSCCHHHHHHHHHHHHHHHH-
T ss_pred eEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCC------EEEECCCCCCCCCCCHHHHHHHHHHHHHHHh-
Confidence 5799999999762 3466777665332222 688999999999554433 344444432
Q ss_pred CCCcEEEeecCccccc
Q 001901 761 YPNNVHLIRGNHEAAD 776 (998)
Q Consensus 761 ~p~~v~llrGNHE~~~ 776 (998)
.+-.|+++.||||...
T Consensus 94 ~~~pv~~v~GNHD~~~ 109 (386)
T 3av0_A 94 NNIKVYIVAGNHEMPR 109 (386)
T ss_dssp TTCEEEECCCGGGSCS
T ss_pred cCCcEEEEcCCCCCCc
Confidence 2346999999999854
No 50
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=96.74 E-value=0.0014 Score=73.04 Aligned_cols=70 Identities=21% Similarity=0.235 Sum_probs=45.5
Q ss_pred CeEEEecCCCCH-------------HHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHH----HHHHhhhcC
Q 001901 699 PIKIFGDLHGQF-------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETIT----LLLALKVEY 761 (998)
Q Consensus 699 ~i~vvGDiHG~~-------------~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~----ll~~lk~~~ 761 (998)
++++++|+|... ..|.++++.+.....+ -+|+.||++|++..+.+.+. +|..|+. .
T Consensus 2 kilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D------~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~-~ 74 (333)
T 1ii7_A 2 KFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVD------FILIAGDLFHSSRPSPGTLKKAIALLQIPKE-H 74 (333)
T ss_dssp EEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCS------EEEEESCSBSSSSCCHHHHHHHHHHHHHHHT-T
T ss_pred EEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCC------EEEECCCcCCCCCCCHHHHHHHHHHHHHHHH-C
Confidence 588999999874 3445555544222222 68899999999855544433 3333432 2
Q ss_pred CCcEEEeecCcccc
Q 001901 762 PNNVHLIRGNHEAA 775 (998)
Q Consensus 762 p~~v~llrGNHE~~ 775 (998)
.-.|+++.||||..
T Consensus 75 ~~~v~~v~GNHD~~ 88 (333)
T 1ii7_A 75 SIPVFAIEGNHDRT 88 (333)
T ss_dssp TCCEEEECCTTTCC
T ss_pred CCcEEEeCCcCCCc
Confidence 23599999999985
No 51
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.66 E-value=0.38 Score=52.65 Aligned_cols=183 Identities=11% Similarity=-0.009 Sum_probs=99.9
Q ss_pred CcEEEEECCCCcEE-EecCCCCCCCCccceEEEE-eCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCC-
Q 001901 150 ADVHCYDVLTNKWS-RITPFGEPPTPRAAHVATA-VGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG- 226 (998)
Q Consensus 150 ~dv~~yD~~t~~W~-~l~~~g~~P~pR~~hsa~~-~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~- 226 (998)
+.+.++|+.+.+-. ++... .. -+.++. -++++||.... .+.++++|+.+....+ .+. .+....
T Consensus 64 ~~v~viD~~t~~~~~~i~~~---~~---p~~i~~~~~g~lyv~~~~------~~~v~~iD~~t~~~~~-~i~-~g~~~~~ 129 (328)
T 3dsm_A 64 HVIFAIDINTFKEVGRITGF---TS---PRYIHFLSDEKAYVTQIW------DYRIFIINPKTYEITG-YIE-CPDMDME 129 (328)
T ss_dssp TEEEEEETTTCCEEEEEECC---SS---EEEEEEEETTEEEEEEBS------CSEEEEEETTTTEEEE-EEE-CTTCCTT
T ss_pred CEEEEEECcccEEEEEcCCC---CC---CcEEEEeCCCeEEEEECC------CCeEEEEECCCCeEEE-EEE-cCCcccc
Confidence 47899999988763 34321 22 234444 56799998742 3679999998863112 222 222000
Q ss_pred CCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCC
Q 001901 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVP 306 (998)
Q Consensus 227 ~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~ 306 (998)
...-+.+++.+ ++||+..-. .-+.+.++|+.+. +....-..+..| +..+...++++|+..........
T Consensus 130 ~~~p~~i~~~~-~~lyv~~~~----~~~~v~viD~~t~--~~~~~i~~g~~p-----~~i~~~~dG~l~v~~~~~~~~~~ 197 (328)
T 3dsm_A 130 SGSTEQMVQYG-KYVYVNCWS----YQNRILKIDTETD--KVVDELTIGIQP-----TSLVMDKYNKMWTITDGGYEGSP 197 (328)
T ss_dssp TCBCCCEEEET-TEEEEEECT----TCCEEEEEETTTT--EEEEEEECSSCB-----CCCEECTTSEEEEEBCCBCTTCS
T ss_pred CCCcceEEEEC-CEEEEEcCC----CCCEEEEEECCCC--eEEEEEEcCCCc-----cceEEcCCCCEEEEECCCccCCc
Confidence 00223444444 489987421 1357999999988 544332222222 22233447888887532211111
Q ss_pred ----cccEEEEecCCCCeEEE-EECCCCCCCCcceeEEEEE--CCEEEEEcccCCCCCccccCCeEEEEECCCCeE
Q 001901 307 ----LASAYGLAKHRDGRWEW-AIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (998)
Q Consensus 307 ----~~dv~~~~~~~~~~W~w-~~~~g~~P~pR~~hsav~~--~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W 375 (998)
.+.++.++..+. +... ...+ ....-..+++. ++.||+..+ .++++|+.+.+.
T Consensus 198 ~~~~~~~v~~id~~t~-~v~~~~~~~----~g~~p~~la~~~d~~~lyv~~~------------~v~~~d~~t~~~ 256 (328)
T 3dsm_A 198 YGYEAPSLYRIDAETF-TVEKQFKFK----LGDWPSEVQLNGTRDTLYWINN------------DIWRMPVEADRV 256 (328)
T ss_dssp SCBCCCEEEEEETTTT-EEEEEEECC----TTCCCEEEEECTTSCEEEEESS------------SEEEEETTCSSC
T ss_pred cccCCceEEEEECCCC-eEEEEEecC----CCCCceeEEEecCCCEEEEEcc------------EEEEEECCCCce
Confidence 256888887654 3322 1221 12223345555 567888632 489999998875
No 52
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.50 E-value=0.78 Score=50.05 Aligned_cols=230 Identities=8% Similarity=-0.043 Sum_probs=124.2
Q ss_pred CCcEEEEECCCCcEEEecCC--CCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCC
Q 001901 149 TADVHCYDVLTNKWSRITPF--GEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (998)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~--g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~ 226 (998)
.+.+..||+.++++..--.. ...+.....+.++..++++|+.... .+.+.++|..+.... .++. ..
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~------~~~v~viD~~t~~~~-~~i~---~~-- 83 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNN------SHVIFAIDINTFKEV-GRIT---GF-- 83 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGG------GTEEEEEETTTCCEE-EEEE---CC--
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcC------CCEEEEEECcccEEE-EEcC---CC--
Confidence 35788999999988652110 0113334556777788999998752 357999999886411 2232 11
Q ss_pred CCcccEEEE-ECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCC
Q 001901 227 PRYGHVMAL-VGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSV 305 (998)
Q Consensus 227 ~R~~hs~~~-~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~ 305 (998)
..-+.+++ -++ ++|+.... -+.+.++|+.+....++. . .+........-..+++.++++|+..-.
T Consensus 84 -~~p~~i~~~~~g-~lyv~~~~-----~~~v~~iD~~t~~~~~~i-~-~g~~~~~~~~p~~i~~~~~~lyv~~~~----- 149 (328)
T 3dsm_A 84 -TSPRYIHFLSDE-KAYVTQIW-----DYRIFIINPKTYEITGYI-E-CPDMDMESGSTEQMVQYGKYVYVNCWS----- 149 (328)
T ss_dssp -SSEEEEEEEETT-EEEEEEBS-----CSEEEEEETTTTEEEEEE-E-CTTCCTTTCBCCCEEEETTEEEEEECT-----
T ss_pred -CCCcEEEEeCCC-eEEEEECC-----CCeEEEEECCCCeEEEEE-E-cCCccccCCCcceEEEECCEEEEEcCC-----
Confidence 22234444 444 89997643 357999999988333322 1 111000000111122378999998421
Q ss_pred CcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCC-ccccCCeEEEEECCCCeEEEcccCcC
Q 001901 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGR-MVEDSSSVAVLDTAAGVWCDTKSVVT 383 (998)
Q Consensus 306 ~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~-~~~~~~dv~vyD~~t~~W~~v~~~~~ 383 (998)
..+.+..++..+. +..+....+..| +.+++. ++++|+......... .....+.++++|+++.+....-..
T Consensus 150 ~~~~v~viD~~t~-~~~~~i~~g~~p-----~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~-- 221 (328)
T 3dsm_A 150 YQNRILKIDTETD-KVVDELTIGIQP-----TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKF-- 221 (328)
T ss_dssp TCCEEEEEETTTT-EEEEEEECSSCB-----CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEEC--
T ss_pred CCCEEEEEECCCC-eEEEEEEcCCCc-----cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEec--
Confidence 1245777776654 433332222212 223333 578888753221110 001136799999999986643222
Q ss_pred CCCCCCCccccCCCCCccCCCCcceeEEEEE--CCEEEEEcCCCCCCCcccEEEeccc
Q 001901 384 SPRTGRYSADAAGGDAAVELTRRCRHAAAAV--GDLIFIYGGLRGGVLLDDLLVAEDL 439 (998)
Q Consensus 384 ~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~--~~~LyVfGG~~~~~~l~Dv~~ld~~ 439 (998)
+....-+.+++. +++||+..+ .++++|..
T Consensus 222 -------------------~~g~~p~~la~~~d~~~lyv~~~--------~v~~~d~~ 252 (328)
T 3dsm_A 222 -------------------KLGDWPSEVQLNGTRDTLYWINN--------DIWRMPVE 252 (328)
T ss_dssp -------------------CTTCCCEEEEECTTSCEEEEESS--------SEEEEETT
T ss_pred -------------------CCCCCceeEEEecCCCEEEEEcc--------EEEEEECC
Confidence 111122444444 568888754 67888764
No 53
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=96.28 E-value=0.0034 Score=72.65 Aligned_cols=72 Identities=18% Similarity=0.230 Sum_probs=46.4
Q ss_pred CCeEEEecCCCC--------------------------HHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCCh--HH
Q 001901 698 APIKIFGDLHGQ--------------------------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS--LE 749 (998)
Q Consensus 698 ~~i~vvGDiHG~--------------------------~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s--~e 749 (998)
.+|.+++|+|.. ...|.++++.+.....+ -+|++||+++.|... .+
T Consensus 40 ~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d------~vi~~GDl~~~~~~~~~~~ 113 (443)
T 2xmo_A 40 LSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTD------VLIISGDLTNNGEKTSHEE 113 (443)
T ss_dssp EEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCS------EEEEESCCBSSCCHHHHHH
T ss_pred eEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCC------EEEECCCCCCCCCHHHHHH
Confidence 468999999974 34556666554211112 688999999998743 23
Q ss_pred HHHHHHHhhhcCCCcEEEeecCccccc
Q 001901 750 TITLLLALKVEYPNNVHLIRGNHEAAD 776 (998)
Q Consensus 750 vl~ll~~lk~~~p~~v~llrGNHE~~~ 776 (998)
+..+|-.|+. .+-.++.++||||...
T Consensus 114 ~~~~l~~l~~-~~~~~~~v~GNHD~~~ 139 (443)
T 2xmo_A 114 LAKKLTQVEK-NGTQVFVVPGNHDINN 139 (443)
T ss_dssp HHHHHHHHHH-TTCEEEEECCTTTSSC
T ss_pred HHHHHHHHHh-CCCeEEEECCcCCCCC
Confidence 3344444431 2346999999999853
No 54
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.16 E-value=0.3 Score=52.05 Aligned_cols=185 Identities=11% Similarity=-0.010 Sum_probs=112.6
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeC
Q 001901 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (998)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG 192 (998)
++.||+-.|..+. +.+.++|+.+++-..-... +..-.+.+++..+++||+.-.
T Consensus 52 ~~~LyestG~~g~------------------------S~v~~vD~~Tgkv~~~~~l---~~~~FgeGit~~g~~ly~ltw 104 (262)
T 3nol_A 52 NGYFYESTGLNGR------------------------SSIRKVDIESGKTLQQIEL---GKRYFGEGISDWKDKIVGLTW 104 (262)
T ss_dssp TTEEEEEEEETTE------------------------EEEEEECTTTCCEEEEEEC---CTTCCEEEEEEETTEEEEEES
T ss_pred CCEEEEECCCCCC------------------------ceEEEEECCCCcEEEEEec---CCccceeEEEEeCCEEEEEEe
Confidence 5789998885432 3788999999876554444 333456778888999999965
Q ss_pred CCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcc
Q 001901 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (998)
Q Consensus 193 ~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~ 272 (998)
. .+.+++||..+.. .-.+++ .+-.+.+++.-++ .||+.-| .+.++.+|+.+.. .-..+.
T Consensus 105 ~------~~~v~v~D~~t~~-~~~ti~------~~~eG~glt~dg~-~L~~SdG------s~~i~~iDp~T~~-v~~~I~ 163 (262)
T 3nol_A 105 K------NGLGFVWNIRNLR-QVRSFN------YDGEGWGLTHNDQ-YLIMSDG------TPVLRFLDPESLT-PVRTIT 163 (262)
T ss_dssp S------SSEEEEEETTTCC-EEEEEE------CSSCCCCEEECSS-CEEECCS------SSEEEEECTTTCS-EEEEEE
T ss_pred e------CCEEEEEECccCc-EEEEEE------CCCCceEEecCCC-EEEEECC------CCeEEEEcCCCCe-EEEEEE
Confidence 3 3689999999864 222332 2236666665444 7888644 2579999999873 222332
Q ss_pred cCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCC-------CcceeEEEEE--C
Q 001901 273 PEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPS-------PRYQHAAVFV--N 343 (998)
Q Consensus 273 ~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~-------pR~~hsav~~--~ 343 (998)
.... ..+...--.....+++||+--- ..+.+..+|+.+...-.|....+..|. .-.-.+.+.. .
T Consensus 164 V~~~-g~~~~~lNELe~~~G~lyan~w------~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~ 236 (262)
T 3nol_A 164 VTAH-GEELPELNELEWVDGEIFANVW------QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEH 236 (262)
T ss_dssp CEET-TEECCCEEEEEEETTEEEEEET------TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTT
T ss_pred eccC-CccccccceeEEECCEEEEEEc------cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCC
Confidence 2111 0000111112334889886421 246788888877655677777654322 1233455555 4
Q ss_pred CEEEEEccc
Q 001901 344 ARLHVSGGA 352 (998)
Q Consensus 344 ~~L~V~GG~ 352 (998)
++|||.|-.
T Consensus 237 ~~lfVTGK~ 245 (262)
T 3nol_A 237 HRLFVTGKL 245 (262)
T ss_dssp TEEEEEETT
T ss_pred CEEEEECCC
Confidence 689998754
No 55
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.14 E-value=2.1 Score=47.07 Aligned_cols=187 Identities=15% Similarity=0.165 Sum_probs=101.1
Q ss_pred cEEEEECCCCc--EEEecCCCCC----CCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCC
Q 001901 151 DVHCYDVLTNK--WSRITPFGEP----PTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPG 224 (998)
Q Consensus 151 dv~~yD~~t~~--W~~l~~~g~~----P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~ 224 (998)
.+++||..+.+ |+.-...... .......+.+..++.||+.... ..++.||..+....|..-...
T Consensus 64 ~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~-------g~l~a~d~~tG~~~W~~~~~~--- 133 (376)
T 3q7m_A 64 LVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK-------AQVYALNTSDGTVAWQTKVAG--- 133 (376)
T ss_dssp EEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETT-------SEEEEEETTTCCEEEEEECSS---
T ss_pred eEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCC-------CEEEEEECCCCCEEEEEeCCC---
Confidence 68899998664 7755422100 0122334455567788886532 479999999876678764311
Q ss_pred CCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCC
Q 001901 225 PGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASS 304 (998)
Q Consensus 225 P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~ 304 (998)
....+.++.++ .+|+... + ..++.||..+....|+.-..... .......+.++.++.+|+. ..
T Consensus 134 ---~~~~~p~~~~~-~v~v~~~-~-----g~l~~~d~~tG~~~W~~~~~~~~--~~~~~~~~~~~~~~~v~~g-~~---- 196 (376)
T 3q7m_A 134 ---EALSRPVVSDG-LVLIHTS-N-----GQLQALNEADGAVKWTVNLDMPS--LSLRGESAPTTAFGAAVVG-GD---- 196 (376)
T ss_dssp ---CCCSCCEEETT-EEEEECT-T-----SEEEEEETTTCCEEEEEECCC-------CCCCCCEEETTEEEEC-CT----
T ss_pred ---ceEcCCEEECC-EEEEEcC-C-----CeEEEEECCCCcEEEEEeCCCCc--eeecCCCCcEEECCEEEEE-cC----
Confidence 11222234454 6766433 2 37999999888778987543211 0011123334457777763 21
Q ss_pred CCcccEEEEecCCCCeEEEEECCCCCC----CCc---ceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCC--eE
Q 001901 305 VPLASAYGLAKHRDGRWEWAIAPGVSP----SPR---YQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAG--VW 375 (998)
Q Consensus 305 ~~~~dv~~~~~~~~~~W~w~~~~g~~P----~pR---~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~--~W 375 (998)
...++.++.. +++-.|......+. ..| .....++.++.+|+.+. ...+++||+++. .|
T Consensus 197 --~g~l~~~d~~-tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~----------~g~l~~~d~~tG~~~w 263 (376)
T 3q7m_A 197 --NGRVSAVLME-QGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY----------NGNLTALDLRSGQIMW 263 (376)
T ss_dssp --TTEEEEEETT-TCCEEEEEECCC-----------CCCCCCEEETTEEEEECT----------TSCEEEEETTTCCEEE
T ss_pred --CCEEEEEECC-CCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec----------CcEEEEEECCCCcEEe
Confidence 1246666654 34444444322110 011 22334566888888642 234899999877 47
Q ss_pred EE
Q 001901 376 CD 377 (998)
Q Consensus 376 ~~ 377 (998)
+.
T Consensus 264 ~~ 265 (376)
T 3q7m_A 264 KR 265 (376)
T ss_dssp EE
T ss_pred ec
Confidence 54
No 56
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.00 E-value=1.7 Score=47.89 Aligned_cols=181 Identities=13% Similarity=0.170 Sum_probs=103.7
Q ss_pred CCcEEEEECCCCc--EEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCC
Q 001901 149 TADVHCYDVLTNK--WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (998)
Q Consensus 149 ~~dv~~yD~~t~~--W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~ 226 (998)
...++.||..+.+ |+.-.... ....+...+.+..++.+|+ |.. ...++.||..+....|.... ..|.
T Consensus 152 ~g~l~~~d~~tG~~~W~~~~~~~-~~~~~~~~~~~~~~~~v~~-g~~------~g~l~~~d~~tG~~~w~~~~---~~~~ 220 (376)
T 3q7m_A 152 NGQLQALNEADGAVKWTVNLDMP-SLSLRGESAPTTAFGAAVV-GGD------NGRVSAVLMEQGQMIWQQRI---SQAT 220 (376)
T ss_dssp TSEEEEEETTTCCEEEEEECCC------CCCCCCEEETTEEEE-CCT------TTEEEEEETTTCCEEEEEEC---CC--
T ss_pred CCeEEEEECCCCcEEEEEeCCCC-ceeecCCCCcEEECCEEEE-EcC------CCEEEEEECCCCcEEEEEec---ccCC
Confidence 4569999998775 87654321 1111222344455677666 321 24699999988766788654 1121
Q ss_pred CC--------cccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEe
Q 001901 227 PR--------YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCG 298 (998)
Q Consensus 227 ~R--------~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfG 298 (998)
.. .....++.++ .+|+.+. + ..+++||+.+....|+.-.. ......+.++.+|+..
T Consensus 221 ~~~~~~~~~~~~~~p~~~~~-~v~~~~~-~-----g~l~~~d~~tG~~~w~~~~~---------~~~~~~~~~~~l~~~~ 284 (376)
T 3q7m_A 221 GSTEIDRLSDVDTTPVVVNG-VVFALAY-N-----GNLTALDLRSGQIMWKRELG---------SVNDFIVDGNRIYLVD 284 (376)
T ss_dssp ---------CCCCCCEEETT-EEEEECT-T-----SCEEEEETTTCCEEEEECCC---------CEEEEEEETTEEEEEE
T ss_pred CCcccccccccCCCcEEECC-EEEEEec-C-----cEEEEEECCCCcEEeeccCC---------CCCCceEECCEEEEEc
Confidence 11 1123334454 6777542 2 36899999988778986421 1233456688999875
Q ss_pred ccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCe--EE
Q 001901 299 GRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV--WC 376 (998)
Q Consensus 299 G~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~--W~ 376 (998)
. ...++.++.. +++-.|..... ..+...+.++.++.||+... ...+++||+.+.+ |+
T Consensus 285 ~-------~g~l~~~d~~-tG~~~w~~~~~---~~~~~~~~~~~~~~l~v~~~----------~g~l~~~d~~tG~~~~~ 343 (376)
T 3q7m_A 285 Q-------NDRVMALTID-GGVTLWTQSDL---LHRLLTSPVLYNGNLVVGDS----------EGYLHWINVEDGRFVAQ 343 (376)
T ss_dssp T-------TCCEEEEETT-TCCEEEEECTT---TTSCCCCCEEETTEEEEECT----------TSEEEEEETTTCCEEEE
T ss_pred C-------CCeEEEEECC-CCcEEEeeccc---CCCcccCCEEECCEEEEEeC----------CCeEEEEECCCCcEEEE
Confidence 3 1346777765 34445554321 12233344567888887531 2359999998886 54
Q ss_pred E
Q 001901 377 D 377 (998)
Q Consensus 377 ~ 377 (998)
.
T Consensus 344 ~ 344 (376)
T 3q7m_A 344 Q 344 (376)
T ss_dssp E
T ss_pred E
Confidence 3
No 57
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.84 E-value=0.34 Score=51.68 Aligned_cols=182 Identities=7% Similarity=-0.073 Sum_probs=108.5
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeC
Q 001901 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (998)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG 192 (998)
++.||+-.|.. +.+..+|+.+++-..-. . +..-.+.+.+..+++||+...
T Consensus 64 ~~~Ly~stG~~--------------------------g~v~~iD~~Tgkv~~~~-l---~~~~FgeGit~~g~~Ly~ltw 113 (268)
T 3nok_A 64 QGHFFESTGHQ--------------------------GTLRQLSLESAQPVWME-R---LGNIFAEGLASDGERLYQLTW 113 (268)
T ss_dssp TTEEEEEETTT--------------------------TEEEECCSSCSSCSEEE-E---CTTCCEEEEEECSSCEEEEES
T ss_pred CCEEEEEcCCC--------------------------CEEEEEECCCCcEEeEE-C---CCCcceeEEEEeCCEEEEEEc
Confidence 68999999853 24888999987643332 3 333456778888999999865
Q ss_pred CCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcc
Q 001901 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (998)
Q Consensus 193 ~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~ 272 (998)
. .+.+++||..+.. .-.+++ .+-.+.+++.-++ .||+.-| .+.++.+|+.+.. .-..+.
T Consensus 114 ~------~~~v~V~D~~Tl~-~~~ti~------~~~eGwGLt~Dg~-~L~vSdG------s~~l~~iDp~T~~-v~~~I~ 172 (268)
T 3nok_A 114 T------EGLLFTWSGMPPQ-RERTTR------YSGEGWGLCYWNG-KLVRSDG------GTMLTFHEPDGFA-LVGAVQ 172 (268)
T ss_dssp S------SCEEEEEETTTTE-EEEEEE------CSSCCCCEEEETT-EEEEECS------SSEEEEECTTTCC-EEEEEE
T ss_pred c------CCEEEEEECCcCc-EEEEEe------CCCceeEEecCCC-EEEEECC------CCEEEEEcCCCCe-EEEEEE
Confidence 3 3679999998853 122222 2334667776665 8999755 3589999999873 222222
Q ss_pred cCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCC--------CCcceeEEEEE--
Q 001901 273 PEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSP--------SPRYQHAAVFV-- 342 (998)
Q Consensus 273 ~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P--------~pR~~hsav~~-- 342 (998)
... .+.+-..-......+++||+--- ..+++..+|+.+...-.|..+.+..| ..-.-.+.+..
T Consensus 173 V~~-~g~~v~~lNeLe~~dG~lyanvw------~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~ 245 (268)
T 3nok_A 173 VKL-RGQPVELINELECANGVIYANIW------HSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPG 245 (268)
T ss_dssp CEE-TTEECCCEEEEEEETTEEEEEET------TCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTT
T ss_pred eCC-CCcccccccccEEeCCEEEEEEC------CCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCC
Confidence 211 11111111223345888886421 24578888887665556666653211 11122344444
Q ss_pred CCEEEEEccc
Q 001901 343 NARLHVSGGA 352 (998)
Q Consensus 343 ~~~L~V~GG~ 352 (998)
+++|||.|=.
T Consensus 246 ~~rlfVTGK~ 255 (268)
T 3nok_A 246 SGRIFMTGKL 255 (268)
T ss_dssp TCCEEEEETT
T ss_pred CCEEEEeCCC
Confidence 3688988753
No 58
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=95.69 E-value=0.0051 Score=69.79 Aligned_cols=70 Identities=20% Similarity=0.223 Sum_probs=45.7
Q ss_pred CCeEEEecCCCCHH----------------HHHHHHHHcCCCCCCCCccceeEEEecccc-CCCCChHHHH----HHHHH
Q 001901 698 APIKIFGDLHGQFG----------------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYV-DRGQHSLETI----TLLLA 756 (998)
Q Consensus 698 ~~i~vvGDiHG~~~----------------dL~~il~~~g~~~~~~~~~~~~~vfLGDyV-DRG~~s~evl----~ll~~ 756 (998)
++++.++|+|.... .|.++++.+.....+ -+|+.||++ |++..+.+.+ .+|..
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D------~vliaGDl~hd~~~~~~~~~~~~~~~l~~ 74 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVD------LILLTGDLLHSRNNPSVVALHDLLDYLKR 74 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCS------EEEECSCCBSCSSSCCHHHHHHHHHHHHH
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCC------EEEECCCccccCCCCCHHHHHHHHHHHHH
Confidence 36889999997544 445555443211122 688999999 9887776544 33444
Q ss_pred hhhcCCCcEEEeecCcccc
Q 001901 757 LKVEYPNNVHLIRGNHEAA 775 (998)
Q Consensus 757 lk~~~p~~v~llrGNHE~~ 775 (998)
|+.. -.|+++.||||..
T Consensus 75 l~~~--~~v~~i~GNHD~~ 91 (379)
T 3tho_B 75 MMRT--APVVVLPGNQDWK 91 (379)
T ss_dssp HHHH--SCEEECCCTTSCT
T ss_pred HHhC--CCEEEEcCCCccc
Confidence 4433 4699999999943
No 59
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=95.66 E-value=0.0087 Score=69.03 Aligned_cols=53 Identities=19% Similarity=0.154 Sum_probs=37.7
Q ss_pred CCeEEEecCCCC------------HHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHH
Q 001901 698 APIKIFGDLHGQ------------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLA 756 (998)
Q Consensus 698 ~~i~vvGDiHG~------------~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~ 756 (998)
.+|+.++|+|-. +..|.++++.+.....+ -+|+.||++|++.-+.+++..++.
T Consensus 77 mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D------~VliaGDLfd~~~ps~~a~~~~~~ 141 (472)
T 4fbk_A 77 IRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVD------MILLGGDIFHDNKPSRKALYQALR 141 (472)
T ss_dssp EEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCS------EEEECSCSBSSSSCCHHHHHHHHH
T ss_pred eEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCC------EEEEcCccccCCCCCHHHHHHHHH
Confidence 359999999964 33566666665332222 689999999999999888765443
No 60
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=95.55 E-value=0.01 Score=67.99 Aligned_cols=73 Identities=23% Similarity=0.223 Sum_probs=50.4
Q ss_pred CCeEEEecCCCCH------------HHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhc-----
Q 001901 698 APIKIFGDLHGQF------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVE----- 760 (998)
Q Consensus 698 ~~i~vvGDiHG~~------------~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~----- 760 (998)
.+|+.++|+|-.. ..|.++++.+.....+ -+|+.||++|++..+.+++..++.+-.+
T Consensus 33 mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D------~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~~~ 106 (431)
T 3t1i_A 33 FKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVD------FILLGGDLFHENKPSRKTLHTCLELLRKYCMGD 106 (431)
T ss_dssp EEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCS------EEEECSCCBSSSSCCHHHHHHHHHHHHHHHBCS
T ss_pred EEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCC------EEEEcCccccCCCCCHHHHHHHHHHHHHHhccC
Confidence 4699999999532 3556666554322222 6899999999999888877655554321
Q ss_pred -------------------------------CCCcEEEeecCccccc
Q 001901 761 -------------------------------YPNNVHLIRGNHEAAD 776 (998)
Q Consensus 761 -------------------------------~p~~v~llrGNHE~~~ 776 (998)
..-.||+|.||||...
T Consensus 107 ~~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~~ 153 (431)
T 3t1i_A 107 RPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPT 153 (431)
T ss_dssp SCCCCEECSCC------------------CCBCSCEEECCCSSSCCB
T ss_pred CcccceeccchhhccccccccccccccccccCCCcEEEEccCCCCcc
Confidence 1246999999999864
No 61
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=95.47 E-value=0.013 Score=66.96 Aligned_cols=53 Identities=19% Similarity=0.154 Sum_probs=38.0
Q ss_pred CCeEEEecCCCC------------HHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHH
Q 001901 698 APIKIFGDLHGQ------------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLA 756 (998)
Q Consensus 698 ~~i~vvGDiHG~------------~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~ 756 (998)
.+++.++|+|-. +..|.++++.+.....+ -+|+.||++|++.-+.+++..++.
T Consensus 14 mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D------~VliaGDLfd~~~p~~~~~~~~~~ 78 (417)
T 4fbw_A 14 IRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVD------MILLGGDIFHDNKPSRKALYQALR 78 (417)
T ss_dssp EEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCS------EEEECSCCBSSSSCCHHHHHHHHH
T ss_pred eEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCC------EEEEcCccccCCCCCHHHHHHHHH
Confidence 369999999975 34566666655332222 689999999999999887765544
No 62
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.35 E-value=0.8 Score=55.76 Aligned_cols=114 Identities=15% Similarity=0.149 Sum_probs=65.4
Q ss_pred cEEEEECCCCc--EEEecCCCCCCCC-----ccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCC
Q 001901 151 DVHCYDVLTNK--WSRITPFGEPPTP-----RAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGP 223 (998)
Q Consensus 151 dv~~yD~~t~~--W~~l~~~g~~P~p-----R~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~ 223 (998)
.++.||..+.+ |+.-........+ ....+.++.+++||+... ...++.+|..+....|+.-.....
T Consensus 88 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~-------dg~l~alD~~tG~~~W~~~~~~~~ 160 (677)
T 1kb0_A 88 VVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW-------DGRLIALDAATGKEVWHQNTFEGQ 160 (677)
T ss_dssp CEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEETTTTC
T ss_pred eEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC-------CCEEEEEECCCCCEEeeecCCcCc
Confidence 68899998775 8765432100000 112345566788888643 256999999987767987531010
Q ss_pred CCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcc
Q 001901 224 GPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (998)
Q Consensus 224 ~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~ 272 (998)
........+.++.++ .+|+..+......-..++.||..+....|+.-.
T Consensus 161 ~~~~~~~~~p~v~~~-~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 161 KGSLTITGAPRVFKG-KVIIGNGGAEYGVRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp CSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CcCcccccCcEEECC-EEEEEecccccCCCCEEEEEECCCCcEEEEecc
Confidence 011112223344555 676644322222346799999999887888753
No 63
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.33 E-value=3.4 Score=43.39 Aligned_cols=208 Identities=17% Similarity=0.103 Sum_probs=123.9
Q ss_pred cceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCccc
Q 001901 176 AAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLAD 255 (998)
Q Consensus 176 ~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lnd 255 (998)
+-++....++.+|+-.|... .+.+.++|+.+.. -..-. ++|..-++.+++..++ +||+.... -+.
T Consensus 22 ftqGL~~~~~~LyestG~~g----~S~v~~vD~~tgk--v~~~~---~l~~~~fgeGi~~~~~-~ly~ltw~-----~~~ 86 (243)
T 3mbr_X 22 FTEGLFYLRGHLYESTGETG----RSSVRKVDLETGR--ILQRA---EVPPPYFGAGIVAWRD-RLIQLTWR-----NHE 86 (243)
T ss_dssp CEEEEEEETTEEEEEECCTT----SCEEEEEETTTCC--EEEEE---ECCTTCCEEEEEEETT-EEEEEESS-----SSE
T ss_pred ccccEEEECCEEEEECCCCC----CceEEEEECCCCC--EEEEE---eCCCCcceeEEEEeCC-EEEEEEee-----CCE
Confidence 34577777889999988632 2579999999873 22222 4566667788888887 89998654 368
Q ss_pred EEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCC-c
Q 001901 256 VWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSP-R 334 (998)
Q Consensus 256 v~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~p-R 334 (998)
+++||+.+. +-..--+.+ ....+.+..+++||+.-| .+.++.+|+.+...-.-..+... +.+ +
T Consensus 87 v~v~D~~tl--~~~~ti~~~------~~Gwglt~dg~~L~vSdg-------s~~l~~iDp~t~~~~~~I~V~~~-g~~~~ 150 (243)
T 3mbr_X 87 GFVYDLATL--TPRARFRYP------GEGWALTSDDSHLYMSDG-------TAVIRKLDPDTLQQVGSIKVTAG-GRPLD 150 (243)
T ss_dssp EEEEETTTT--EEEEEEECS------SCCCEEEECSSCEEEECS-------SSEEEEECTTTCCEEEEEECEET-TEECC
T ss_pred EEEEECCcC--cEEEEEeCC------CCceEEeeCCCEEEEECC-------CCeEEEEeCCCCeEEEEEEEccC-Ccccc
Confidence 999999887 433221111 123345566778888754 24577788776533333444321 222 2
Q ss_pred ceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCe---EEEcccCcCCCCCCCCccccCCCCCccCCCCcceeEE
Q 001901 335 YQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV---WCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAA 411 (998)
Q Consensus 335 ~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~---W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa 411 (998)
.-.-+...+++||+--- ..++|.+.|+++.+ |..+..+. |.... ...+..-.--+.
T Consensus 151 ~lNeLe~~~G~lyanvw---------~s~~I~vIDp~tG~V~~~idl~~l~--~~~~~----------~~~~~~~vlNGI 209 (243)
T 3mbr_X 151 NLNELEWVNGELLANVW---------LTSRIARIDPASGKVVAWIDLQALV--PDADA----------LTDSTNDVLNGI 209 (243)
T ss_dssp CEEEEEEETTEEEEEET---------TTTEEEEECTTTCBEEEEEECGGGS--TTTTS----------CCCTTSSCEEEE
T ss_pred cceeeEEeCCEEEEEEC---------CCCeEEEEECCCCCEEEEEECCcCc--ccccc----------ccCCcCCceEEE
Confidence 22234556888886421 15689999999986 44444331 10000 000112233555
Q ss_pred EEE--CCEEEEEcCCCCCCCcccEEEecccc
Q 001901 412 AAV--GDLIFIYGGLRGGVLLDDLLVAEDLA 440 (998)
Q Consensus 412 ~~~--~~~LyVfGG~~~~~~l~Dv~~ld~~~ 440 (998)
+.. +++|||.|= +...+|.+...+
T Consensus 210 A~d~~~~~lfVTGK-----~wp~~~~v~~~~ 235 (243)
T 3mbr_X 210 AFDAEHDRLFVTGK-----RWPMLYEIRLTP 235 (243)
T ss_dssp EEETTTTEEEEEET-----TCSEEEEEEECC
T ss_pred EEcCCCCEEEEECC-----CCCcEEEEEEec
Confidence 555 579999995 567777776644
No 64
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=95.23 E-value=3.9 Score=43.54 Aligned_cols=185 Identities=10% Similarity=0.037 Sum_probs=106.0
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCc
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~ 229 (998)
+.+..+|+.+++-..--.. +....+++.+..++.+|+..-. .+.+++||..+.. .-.+++ .+ .| .
T Consensus 44 s~v~~iD~~tg~v~~~i~l---~~~~fgeGi~~~g~~lyv~t~~------~~~v~viD~~t~~-v~~~i~-~g-~~---~ 108 (266)
T 2iwa_A 44 SSVRQVALQTGKVENIHKM---DDSYFGEGLTLLNEKLYQVVWL------KNIGFIYDRRTLS-NIKNFT-HQ-MK---D 108 (266)
T ss_dssp CEEEEEETTTCCEEEEEEC---CTTCCEEEEEEETTEEEEEETT------CSEEEEEETTTTE-EEEEEE-CC-SS---S
T ss_pred CEEEEEECCCCCEEEEEec---CCCcceEEEEEeCCEEEEEEec------CCEEEEEECCCCc-EEEEEE-CC-CC---C
Confidence 4799999999886554333 2334556788888999998642 3679999998753 112222 12 12 3
Q ss_pred ccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCccc
Q 001901 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLAS 309 (998)
Q Consensus 230 ~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~d 309 (998)
+.+++. .++++|+.-| .+.++.+|+.+.. .-..+..... +.+...--.....++++|+--. ..++
T Consensus 109 g~glt~-Dg~~l~vs~g------s~~l~viD~~t~~-v~~~I~Vg~~-~~p~~~~nele~~dg~lyvn~~------~~~~ 173 (266)
T 2iwa_A 109 GWGLAT-DGKILYGSDG------TSILYEIDPHTFK-LIKKHNVKYN-GHRVIRLNELEYINGEVWANIW------QTDC 173 (266)
T ss_dssp CCEEEE-CSSSEEEECS------SSEEEEECTTTCC-EEEEEECEET-TEECCCEEEEEEETTEEEEEET------TSSE
T ss_pred eEEEEE-CCCEEEEECC------CCeEEEEECCCCc-EEEEEEECCC-CcccccceeEEEECCEEEEecC------CCCe
Confidence 344444 4447998643 3689999998872 1222222111 1111111122233888887632 2467
Q ss_pred EEEEecCCCCeEEEEECCCCC--------CCCcceeEEEEE--CCEEEEEcccCCCCCccccCCeEEEEECCCC
Q 001901 310 AYGLAKHRDGRWEWAIAPGVS--------PSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAG 373 (998)
Q Consensus 310 v~~~~~~~~~~W~w~~~~g~~--------P~pR~~hsav~~--~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~ 373 (998)
+..+|+.+...-.|..+.+.. +..-.-.+.++. ++++||.|+.. +.+++.++...
T Consensus 174 V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~---------~~v~~i~l~~~ 238 (266)
T 2iwa_A 174 IARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLW---------PKLFEIKLHLV 238 (266)
T ss_dssp EEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTC---------SEEEEEEEEEC
T ss_pred EEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCC---------CeEEEEEEecc
Confidence 888888776555666654321 111123455555 46899998753 45777766443
No 65
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=95.07 E-value=2.6 Score=46.94 Aligned_cols=187 Identities=14% Similarity=0.070 Sum_probs=91.9
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
.++++|+.+.+.......+........-..+.+ ++.+|+.|+. ...+++||+.+....+ .+. ....
T Consensus 145 ~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~------d~~v~~~d~~~~~~~~-~~~-----~~~~ 212 (433)
T 3bws_A 145 GMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQ------ANAVHVFDLKTLAYKA-TVD-----LTGK 212 (433)
T ss_dssp SEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGG------GTEEEEEETTTCCEEE-EEE-----CSSS
T ss_pred eEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECC------CCEEEEEECCCceEEE-EEc-----CCCC
Confidence 589999998887654332110111111122233 4588887764 2579999998754122 222 1112
Q ss_pred cccEEEEEC-CcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCC-
Q 001901 229 YGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVP- 306 (998)
Q Consensus 229 ~~hs~~~~~-~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~- 306 (998)
.-.+++... ++.+|+.++.++ .+.+||+.+. +....-.... .....+...+++.+++++.......
T Consensus 213 ~~~~~~~~~~~~~l~~~~~~~~-----~i~~~d~~~~--~~~~~~~~~~-----~~~~~~~~~~g~~l~~~~~~~~~~~~ 280 (433)
T 3bws_A 213 WSKILLYDPIRDLVYCSNWISE-----DISVIDRKTK--LEIRKTDKIG-----LPRGLLLSKDGKELYIAQFSASNQES 280 (433)
T ss_dssp SEEEEEEETTTTEEEEEETTTT-----EEEEEETTTT--EEEEECCCCS-----EEEEEEECTTSSEEEEEEEESCTTCS
T ss_pred CeeEEEEcCCCCEEEEEecCCC-----cEEEEECCCC--cEEEEecCCC-----CceEEEEcCCCCEEEEEECCCCcccc
Confidence 223333433 335667665443 6899999887 5443322211 1122223335545555544322211
Q ss_pred -cccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE--CCEEEEEcccCCCCCccccCCeEEEEECCCCeEE
Q 001901 307 -LASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (998)
Q Consensus 307 -~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~--~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~ 376 (998)
-..++.|+.... +....... +.....+++. +..+|+.++. ...+.+||+.+.+-.
T Consensus 281 ~dg~i~~~d~~~~-~~~~~~~~-----~~~~~~~~~~~~g~~l~~~~~~---------~~~v~v~d~~~~~~~ 338 (433)
T 3bws_A 281 GGGRLGIYSMDKE-KLIDTIGP-----PGNKRHIVSGNTENKIYVSDMC---------CSKIEVYDLKEKKVQ 338 (433)
T ss_dssp CCEEEEEEETTTT-EEEEEEEE-----EECEEEEEECSSTTEEEEEETT---------TTEEEEEETTTTEEE
T ss_pred CCCeEEEEECCCC-cEEeeccC-----CCCcceEEECCCCCEEEEEecC---------CCEEEEEECCCCcEE
Confidence 235566665543 22211100 0111122232 3368887654 245899999877644
No 66
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=94.83 E-value=2.2 Score=48.16 Aligned_cols=191 Identities=13% Similarity=0.027 Sum_probs=95.9
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
..++++|+....-..+.... .. -.+.+.- +++.+++++.... ...++++|+.+.. ...+. ..+ .
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~----~~-v~~~~~Spdg~~la~~s~~~~---~~~i~~~d~~tg~--~~~l~---~~~--~ 223 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSP----QP-LMSPAWSPDGSKLAYVTFESG---RSALVIQTLANGA--VRQVA---SFP--R 223 (415)
T ss_dssp EEEEEEETTSCSCEEEEEES----SC-EEEEEECTTSSEEEEEECTTS---SCEEEEEETTTCC--EEEEE---CCS--S
T ss_pred ceEEEEcCCCCCCEEEeCCC----Cc-ceeeEEcCCCCEEEEEEecCC---CcEEEEEECCCCc--EEEee---cCC--C
Confidence 58899998876555554321 11 1122222 3444555553221 2579999998763 44443 111 1
Q ss_pred cccEEEEECCc-EEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCc
Q 001901 229 YGHVMALVGQR-YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPL 307 (998)
Q Consensus 229 ~~hs~~~~~~~-~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~ 307 (998)
.-.+.+.-.++ +|++.+..++ ...+|.+|+.+. +...+..... .........+++.+++++.... .
T Consensus 224 ~~~~~~~spdg~~la~~~~~~g---~~~i~~~d~~~~--~~~~l~~~~~-----~~~~~~~spdg~~l~~~s~~~g---~ 290 (415)
T 2hqs_A 224 HNGAPAFSPDGSKLAFALSKTG---SLNLYVMDLASG--QIRQVTDGRS-----NNTEPTWFPDSQNLAFTSDQAG---R 290 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTS---SCEEEEEETTTC--CEEECCCCSS-----CEEEEEECTTSSEEEEEECTTS---S
T ss_pred cccCEEEcCCCCEEEEEEecCC---CceEEEEECCCC--CEEeCcCCCC-----cccceEECCCCCEEEEEECCCC---C
Confidence 22233333333 4554554443 247999999887 6665543221 1122223346665555543211 2
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEccc
Q 001901 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKS 380 (998)
Q Consensus 308 ~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~ 380 (998)
..+|.++.... . ...... ......+.++. +++.+++++.... ...++++|+.+.+...+..
T Consensus 291 ~~i~~~d~~~~-~--~~~l~~---~~~~~~~~~~spdG~~l~~~~~~~g------~~~i~~~d~~~~~~~~l~~ 352 (415)
T 2hqs_A 291 PQVYKVNINGG-A--PQRITW---EGSQNQDADVSSDGKFMVMVSSNGG------QQHIAKQDLATGGVQVLSS 352 (415)
T ss_dssp CEEEEEETTSS-C--CEECCC---SSSEEEEEEECTTSSEEEEEEECSS------CEEEEEEETTTCCEEECCC
T ss_pred cEEEEEECCCC-C--EEEEec---CCCcccCeEECCCCCEEEEEECcCC------ceEEEEEECCCCCEEEecC
Confidence 35777766543 1 122221 11222223332 5665556554321 3469999999998866543
No 67
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=94.69 E-value=1.5 Score=52.16 Aligned_cols=112 Identities=11% Similarity=0.086 Sum_probs=64.1
Q ss_pred cEEEEEC-CCC--cEEEecCCCCCCC--C---ccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecC
Q 001901 151 DVHCYDV-LTN--KWSRITPFGEPPT--P---RAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG 222 (998)
Q Consensus 151 dv~~yD~-~t~--~W~~l~~~g~~P~--p---R~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g 222 (998)
.++.||. .+. .|+.-........ + ....+.++.+++||+... ...++.+|..+....|+.-..
T Consensus 74 ~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------dg~l~alD~~tG~~~W~~~~~-- 144 (571)
T 2ad6_A 74 NTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA-------NGHLLALDAKTGKINWEVEVC-- 144 (571)
T ss_dssp CEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECC--
T ss_pred EEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC-------CCEEEEEECCCCCEEEEecCC--
Confidence 6889998 766 4886433210000 0 112345567888888743 246999999887667986431
Q ss_pred CCCCC-CcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcc
Q 001901 223 PGPGP-RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (998)
Q Consensus 223 ~~P~~-R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~ 272 (998)
..+.. ....+-++.++ .+|+..+......-..++.||..+....|+.-.
T Consensus 145 ~~~~~~~~~~~P~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 145 DPKVGSTLTQAPFVAKD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp CGGGTCBCCSCCEEETT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred CCCccceeccCCEEECC-EEEEEecCCccCCCCEEEEEECCCCcEEEEEcc
Confidence 11111 11223334555 677654321111235799999999888897643
No 68
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=94.30 E-value=5.2 Score=42.46 Aligned_cols=206 Identities=8% Similarity=0.012 Sum_probs=118.0
Q ss_pred eEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEE
Q 001901 178 HVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVW 257 (998)
Q Consensus 178 hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~ 257 (998)
++....++.+|+..|... .+.+.++|+.+.. -..-. +++..-++.+++..++ +||+.... -+.++
T Consensus 46 qGL~~~~~~LyestG~~g----~S~v~~vD~~Tgk--v~~~~---~l~~~~FgeGit~~g~-~ly~ltw~-----~~~v~ 110 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNG----RSSIRKVDIESGK--TLQQI---ELGKRYFGEGISDWKD-KIVGLTWK-----NGLGF 110 (262)
T ss_dssp EEEEEETTEEEEEEEETT----EEEEEEECTTTCC--EEEEE---ECCTTCCEEEEEEETT-EEEEEESS-----SSEEE
T ss_pred ceEEEECCEEEEECCCCC----CceEEEEECCCCc--EEEEE---ecCCccceeEEEEeCC-EEEEEEee-----CCEEE
Confidence 555666889999988632 2578999999874 22222 3444456677778877 89998653 35899
Q ss_pred EEECCCCCceEE-EcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCC-cc
Q 001901 258 ALDTAAKPYEWR-KLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSP-RY 335 (998)
Q Consensus 258 ~yD~~s~~~~W~-~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~p-R~ 335 (998)
+||+.+. +-. .+...+ ...+.+..+++||+.-| .+.++.+|+.+...-.-..+... +.+ +.
T Consensus 111 v~D~~t~--~~~~ti~~~~-------eG~glt~dg~~L~~SdG-------s~~i~~iDp~T~~v~~~I~V~~~-g~~~~~ 173 (262)
T 3nol_A 111 VWNIRNL--RQVRSFNYDG-------EGWGLTHNDQYLIMSDG-------TPVLRFLDPESLTPVRTITVTAH-GEELPE 173 (262)
T ss_dssp EEETTTC--CEEEEEECSS-------CCCCEEECSSCEEECCS-------SSEEEEECTTTCSEEEEEECEET-TEECCC
T ss_pred EEECccC--cEEEEEECCC-------CceEEecCCCEEEEECC-------CCeEEEEcCCCCeEEEEEEeccC-Cccccc
Confidence 9999887 322 222211 22344455677888643 24577888776544444444321 111 11
Q ss_pred eeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccCcC-CCCCCCCccccCCCCCccCCCCcceeEEEEE
Q 001901 336 QHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVT-SPRTGRYSADAAGGDAAVELTRRCRHAAAAV 414 (998)
Q Consensus 336 ~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~~~-~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~ 414 (998)
---+...+++||+-- -..+.|.+.|+++.+-...-.+.. .+... ...+..-.-.+.+..
T Consensus 174 lNELe~~~G~lyan~---------w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~-----------~~~~~~~vlNGIA~d 233 (262)
T 3nol_A 174 LNELEWVDGEIFANV---------WQTNKIVRIDPETGKVTGIIDLNGILAEAG-----------PLPSPIDVLNGIAWD 233 (262)
T ss_dssp EEEEEEETTEEEEEE---------TTSSEEEEECTTTCBEEEEEECTTGGGGSC-----------SCCSSCCCEEEEEEE
T ss_pred cceeEEECCEEEEEE---------ccCCeEEEEECCCCcEEEEEECCcCccccc-----------cccCcCCceEEEEEc
Confidence 112445588988632 125689999999986433332210 00000 000112234566665
Q ss_pred --CCEEEEEcCCCCCCCcccEEEecccc
Q 001901 415 --GDLIFIYGGLRGGVLLDDLLVAEDLA 440 (998)
Q Consensus 415 --~~~LyVfGG~~~~~~l~Dv~~ld~~~ 440 (998)
+++|||.|- +...+|.+...+
T Consensus 234 p~~~~lfVTGK-----~Wp~~~ev~~~~ 256 (262)
T 3nol_A 234 KEHHRLFVTGK-----LWPKVFEITLTQ 256 (262)
T ss_dssp TTTTEEEEEET-----TCSEEEEEEEEE
T ss_pred CCCCEEEEECC-----CCCceEEEEEec
Confidence 569999985 466677766543
No 69
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=94.14 E-value=7.1 Score=41.53 Aligned_cols=206 Identities=10% Similarity=0.017 Sum_probs=115.2
Q ss_pred eEEEEeC-CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccE
Q 001901 178 HVATAVG-TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADV 256 (998)
Q Consensus 178 hsa~~~~-~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv 256 (998)
|+.+..+ +.+|+..|.. ..+.+.++|+.+.. -..-. +++....+..++..++ +||+..-. -+.+
T Consensus 24 ~Gl~~~~dg~Lyvstg~~----~~s~v~~iD~~tg~--v~~~i---~l~~~~fgeGi~~~g~-~lyv~t~~-----~~~v 88 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLY----GRSSVRQVALQTGK--VENIH---KMDDSYFGEGLTLLNE-KLYQVVWL-----KNIG 88 (266)
T ss_dssp EEEEECSTTEEEEEECST----TTCEEEEEETTTCC--EEEEE---ECCTTCCEEEEEEETT-EEEEEETT-----CSEE
T ss_pred ccEEEeCCCeEEEECCCC----CCCEEEEEECCCCC--EEEEE---ecCCCcceEEEEEeCC-EEEEEEec-----CCEE
Confidence 6777766 6999987742 13679999999874 22222 2344445566777776 89998643 3579
Q ss_pred EEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCc-c
Q 001901 257 WALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPR-Y 335 (998)
Q Consensus 257 ~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR-~ 335 (998)
++||+.+....- .++ .+ .| ...+....++++|+.-| .+.++.+|+.+...-.-..+... +.+. .
T Consensus 89 ~viD~~t~~v~~-~i~-~g-~~----~g~glt~Dg~~l~vs~g-------s~~l~viD~~t~~v~~~I~Vg~~-~~p~~~ 153 (266)
T 2iwa_A 89 FIYDRRTLSNIK-NFT-HQ-MK----DGWGLATDGKILYGSDG-------TSILYEIDPHTFKLIKKHNVKYN-GHRVIR 153 (266)
T ss_dssp EEEETTTTEEEE-EEE-CC-SS----SCCEEEECSSSEEEECS-------SSEEEEECTTTCCEEEEEECEET-TEECCC
T ss_pred EEEECCCCcEEE-EEE-CC-CC----CeEEEEECCCEEEEECC-------CCeEEEEECCCCcEEEEEEECCC-Cccccc
Confidence 999998872111 122 11 11 12334455678888643 34678888776533333333321 1111 1
Q ss_pred eeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCe---EEEcccCcCCC-CCCCCccccCCCCCccCCCCcceeEE
Q 001901 336 QHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV---WCDTKSVVTSP-RTGRYSADAAGGDAAVELTRRCRHAA 411 (998)
Q Consensus 336 ~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~---W~~v~~~~~~p-~~~~~~~~~~~~~~~~~p~~R~~hsa 411 (998)
-..+...++++|+--. ..+.|.+.|+++++ |..+....... .. ..+..-.-.+.
T Consensus 154 ~nele~~dg~lyvn~~---------~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~-------------~~~~~~v~nGI 211 (266)
T 2iwa_A 154 LNELEYINGEVWANIW---------QTDCIARISAKDGTLLGWILLPNLRKKLIDE-------------GFRDIDVLNGI 211 (266)
T ss_dssp EEEEEEETTEEEEEET---------TSSEEEEEETTTCCEEEEEECHHHHHHHHHT-------------TCTTCCCEEEE
T ss_pred ceeEEEECCEEEEecC---------CCCeEEEEECCCCcEEEEEECCCcccccccc-------------cccccCceEEE
Confidence 2233445888887521 15679999999985 33333110000 00 00011123555
Q ss_pred EEE--CCEEEEEcCCCCCCCcccEEEecccc
Q 001901 412 AAV--GDLIFIYGGLRGGVLLDDLLVAEDLA 440 (998)
Q Consensus 412 ~~~--~~~LyVfGG~~~~~~l~Dv~~ld~~~ 440 (998)
+.. ++++||.|+.. +.+++++...
T Consensus 212 a~~~~~~~lfVTgk~~-----~~v~~i~l~~ 237 (266)
T 2iwa_A 212 AWDQENKRIFVTGKLW-----PKLFEIKLHL 237 (266)
T ss_dssp EEETTTTEEEEEETTC-----SEEEEEEEEE
T ss_pred EEcCCCCEEEEECCCC-----CeEEEEEEec
Confidence 555 56999999853 5566666554
No 70
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=93.93 E-value=3.7 Score=44.95 Aligned_cols=178 Identities=17% Similarity=0.171 Sum_probs=91.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~ 227 (998)
+.++++|+.+++-...-..+ ..-++++.. +..+|+.|+. ...+++||+.+.. ....... .
T Consensus 12 ~~v~v~d~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~------d~~i~v~d~~~~~--~~~~~~~-----~ 73 (391)
T 1l0q_A 12 DNISVIDVTSNKVTATIPVG-----SNPMGAVISPDGTKVYVANAH------SNDVSIIDTATNN--VIATVPA-----G 73 (391)
T ss_dssp TEEEEEETTTTEEEEEEECS-----SSEEEEEECTTSSEEEEEEGG------GTEEEEEETTTTE--EEEEEEC-----S
T ss_pred CEEEEEECCCCeEEEEeecC-----CCcceEEECCCCCEEEEECCC------CCeEEEEECCCCe--EEEEEEC-----C
Confidence 47889999988655433221 112333333 3367777754 2579999998753 3222211 1
Q ss_pred CcccEEEEEC-CcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCC-EEEEEeccCCCCC
Q 001901 228 RYGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDG-LLLLCGGRDASSV 305 (998)
Q Consensus 228 R~~hs~~~~~-~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~-~lyvfGG~~~~~~ 305 (998)
..-.+++... ++.||+.|..+ ..+.+||+.+. +......... .....+...++ .+|+.++.+
T Consensus 74 ~~v~~~~~spdg~~l~~~~~~~-----~~v~v~d~~~~--~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~~~---- 137 (391)
T 1l0q_A 74 SSPQGVAVSPDGKQVYVTNMAS-----STLSVIDTTSN--TVAGTVKTGK-----SPLGLALSPDGKKLYVTNNGD---- 137 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTT-----TEEEEEETTTT--EEEEEEECSS-----SEEEEEECTTSSEEEEEETTT----
T ss_pred CCccceEECCCCCEEEEEECCC-----CEEEEEECCCC--eEEEEEeCCC-----CcceEEECCCCCEEEEEeCCC----
Confidence 1223333333 33566665433 46999999887 4433322221 11222222334 566776533
Q ss_pred CcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE--CCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEc
Q 001901 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (998)
Q Consensus 306 ~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~--~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v 378 (998)
..++.++.... +.......+. .-..+++. +..+|+.++. ...+++||+.+.+....
T Consensus 138 --~~v~~~d~~~~-~~~~~~~~~~-----~~~~~~~~~dg~~l~~~~~~---------~~~v~~~d~~~~~~~~~ 195 (391)
T 1l0q_A 138 --KTVSVINTVTK-AVINTVSVGR-----SPKGIAVTPDGTKVYVANFD---------SMSISVIDTVTNSVIDT 195 (391)
T ss_dssp --TEEEEEETTTT-EEEEEEECCS-----SEEEEEECTTSSEEEEEETT---------TTEEEEEETTTTEEEEE
T ss_pred --CEEEEEECCCC-cEEEEEecCC-----CcceEEECCCCCEEEEEeCC---------CCEEEEEECCCCeEEEE
Confidence 24566655433 3333222221 11333333 3467777653 24599999998865443
No 71
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=93.81 E-value=0.064 Score=61.51 Aligned_cols=71 Identities=20% Similarity=0.205 Sum_probs=41.9
Q ss_pred CeEEEecCCCCHHHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCC------hHH-HHHHHHHhhhcCCCcEEEeecC
Q 001901 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQH------SLE-TITLLLALKVEYPNNVHLIRGN 771 (998)
Q Consensus 699 ~i~vvGDiHG~~~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~------s~e-vl~ll~~lk~~~p~~v~llrGN 771 (998)
++.++||+|....... +++.+.....+-+ -+|++||+++.+.. ..+ ...+|-.+.... -++.+.||
T Consensus 121 ~f~~igD~~~~~~~~~-~l~~~~~~~~~~D----~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~~~--P~~~v~GN 193 (424)
T 2qfp_A 121 TFGLIGDLGQSFDSNT-TLSHYELSPKKGQ----TVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQ--PWIWTAGN 193 (424)
T ss_dssp EEEEECSCTTBHHHHH-HHHHHHTCSSCCC----EEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHTTS--CEEECCCH
T ss_pred EEEEEEeCCCCCChHH-HHHHHHhCCCCCC----EEEEcCccccccccccccchHHHHHHHHHHHHHhcC--CeEeecCC
Confidence 5899999998875442 3443321110111 58899999986421 112 223333343333 59999999
Q ss_pred ccccc
Q 001901 772 HEAAD 776 (998)
Q Consensus 772 HE~~~ 776 (998)
||...
T Consensus 194 HD~~~ 198 (424)
T 2qfp_A 194 HEIEF 198 (424)
T ss_dssp HHHCC
T ss_pred ccccc
Confidence 99863
No 72
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=93.75 E-value=5.8 Score=41.83 Aligned_cols=180 Identities=13% Similarity=0.084 Sum_probs=87.6
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
..+.+||+.+.++....... .....-.+++.. ++..++.|+.+ ..+.+||+.+.. ..... .. ...
T Consensus 119 ~~i~~~d~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~d------g~v~~~d~~~~~--~~~~~---~~-~~~ 184 (337)
T 1gxr_A 119 STLSIWDLAAPTPRIKAELT--SSAPACYALAISPDSKVCFSCCSD------GNIAVWDLHNQT--LVRQF---QG-HTD 184 (337)
T ss_dssp SEEEEEECCCC--EEEEEEE--CSSSCEEEEEECTTSSEEEEEETT------SCEEEEETTTTE--EEEEE---CC-CSS
T ss_pred CcEEEEECCCCCcceeeecc--cCCCceEEEEECCCCCEEEEEeCC------CcEEEEeCCCCc--eeeee---ec-ccC
Confidence 47888999887754433221 001111222222 34556666542 469999998752 22211 11 111
Q ss_pred cccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcc
Q 001901 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (998)
Q Consensus 229 ~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~ 308 (998)
.-.+++...++..++.|+.++ .+..||+.+. +-....... ..........++.++++|+.++
T Consensus 185 ~i~~~~~~~~~~~l~~~~~dg-----~i~~~d~~~~--~~~~~~~~~-----~~v~~~~~s~~~~~l~~~~~~~------ 246 (337)
T 1gxr_A 185 GASCIDISNDGTKLWTGGLDN-----TVRSWDLREG--RQLQQHDFT-----SQIFSLGYCPTGEWLAVGMESS------ 246 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTS-----EEEEEETTTT--EEEEEEECS-----SCEEEEEECTTSSEEEEEETTS------
T ss_pred ceEEEEECCCCCEEEEEecCC-----cEEEEECCCC--ceEeeecCC-----CceEEEEECCCCCEEEEEcCCC------
Confidence 222333333445777777554 6889999877 332221111 1122223334667777776543
Q ss_pred cEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCeEE
Q 001901 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (998)
Q Consensus 309 dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~ 376 (998)
.+..|+........ ... ....-.++.+. ++++++.|+.+ ..+.+||..+.+-.
T Consensus 247 ~i~~~~~~~~~~~~---~~~---~~~~v~~~~~~~~~~~l~~~~~d---------g~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 247 NVEVLHVNKPDKYQ---LHL---HESCVLSLKFAYCGKWFVSTGKD---------NLLNAWRTPYGASI 300 (337)
T ss_dssp CEEEEETTSSCEEE---ECC---CSSCEEEEEECTTSSEEEEEETT---------SEEEEEETTTCCEE
T ss_pred cEEEEECCCCCeEE---EcC---CccceeEEEECCCCCEEEEecCC---------CcEEEEECCCCeEE
Confidence 34555554442221 111 11112233333 46677777642 34889999887654
No 73
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=93.61 E-value=0.059 Score=58.27 Aligned_cols=21 Identities=5% Similarity=0.267 Sum_probs=18.1
Q ss_pred HHHHHHHHHcCCcEEEEcccc
Q 001901 885 DRVMEFCNNNDLQLIVRAHEC 905 (998)
Q Consensus 885 ~~~~~fl~~~~l~~iiR~H~~ 905 (998)
+.+.+.|+++++++++-||.=
T Consensus 203 ~~l~~~l~~~~v~~~l~GH~H 223 (313)
T 1ute_A 203 KQLLPLLTTHKVTAYLCGHDH 223 (313)
T ss_dssp HHTHHHHHHTTCSEEEECSSS
T ss_pred HHHHHHHHHcCCcEEEECChh
Confidence 567778999999999999984
No 74
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=93.38 E-value=6.1 Score=43.12 Aligned_cols=178 Identities=16% Similarity=0.108 Sum_probs=89.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~ 227 (998)
+.++++|+.+++....-..+ . .-.+++.. ++.+|+.|.. ...+++||+.+.. ....... .
T Consensus 54 ~~i~v~d~~~~~~~~~~~~~---~--~v~~~~~spdg~~l~~~~~~------~~~v~v~d~~~~~--~~~~~~~-----~ 115 (391)
T 1l0q_A 54 NDVSIIDTATNNVIATVPAG---S--SPQGVAVSPDGKQVYVTNMA------SSTLSVIDTTSNT--VAGTVKT-----G 115 (391)
T ss_dssp TEEEEEETTTTEEEEEEECS---S--SEEEEEECTTSSEEEEEETT------TTEEEEEETTTTE--EEEEEEC-----S
T ss_pred CeEEEEECCCCeEEEEEECC---C--CccceEECCCCCEEEEEECC------CCEEEEEECCCCe--EEEEEeC-----C
Confidence 47889999888765544332 1 22333333 3366666543 2569999998863 3222211 1
Q ss_pred CcccEEEEECC-cEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeC-CEEEEEeccCCCCC
Q 001901 228 RYGHVMALVGQ-RYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSD-GLLLLCGGRDASSV 305 (998)
Q Consensus 228 R~~hs~~~~~~-~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~-~~lyvfGG~~~~~~ 305 (998)
..-.+++...+ +.||+.++.+ +.+++||+.+. +....-..... ....+...+ +.||+.++.+
T Consensus 116 ~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~--~~~~~~~~~~~-----~~~~~~~~dg~~l~~~~~~~---- 179 (391)
T 1l0q_A 116 KSPLGLALSPDGKKLYVTNNGD-----KTVSVINTVTK--AVINTVSVGRS-----PKGIAVTPDGTKVYVANFDS---- 179 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTT-----TEEEEEETTTT--EEEEEEECCSS-----EEEEEECTTSSEEEEEETTT----
T ss_pred CCcceEEECCCCCEEEEEeCCC-----CEEEEEECCCC--cEEEEEecCCC-----cceEEECCCCCEEEEEeCCC----
Confidence 12233444333 3576776544 37899999887 55443332221 122222223 4666766543
Q ss_pred CcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CC-EEEEEcccCCCCCccccCCeEEEEECCCCeEE
Q 001901 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NA-RLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (998)
Q Consensus 306 ~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~-~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~ 376 (998)
..++.++.... ........ ...-.++++. ++ .+++.+ ... ....+++||+.+.+-.
T Consensus 180 --~~v~~~d~~~~-~~~~~~~~-----~~~~~~~~~~~~g~~l~~~~-~~~------~~~~v~~~d~~~~~~~ 237 (391)
T 1l0q_A 180 --MSISVIDTVTN-SVIDTVKV-----EAAPSGIAVNPEGTKAYVTN-VDK------YFNTVSMIDTGTNKIT 237 (391)
T ss_dssp --TEEEEEETTTT-EEEEEEEC-----SSEEEEEEECTTSSEEEEEE-ECS------SCCEEEEEETTTTEEE
T ss_pred --CEEEEEECCCC-eEEEEEec-----CCCccceEECCCCCEEEEEe-cCc------CCCcEEEEECCCCeEE
Confidence 23566665543 22211111 1112223333 34 455543 211 1356999999887643
No 75
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=93.31 E-value=3.3 Score=42.60 Aligned_cols=190 Identities=11% Similarity=0.049 Sum_probs=94.4
Q ss_pred cCCcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCC-CCCceEEeeecCCCC
Q 001901 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQ-QRPRWHRVVVQGPGP 225 (998)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t-~t~~W~~l~~~g~~P 225 (998)
....++++|+.+.+...+.... ..-.+++.. +++.+++++. ..++++|+.+ .. ...+. ...
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~-----~~v~~~~~spdg~~l~~~~~-------~~i~~~d~~~~~~--~~~~~---~~~ 82 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTP-----ELFEAPNWSPDGKYLLLNSE-------GLLYRLSLAGDPS--PEKVD---TGF 82 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEES-----SCCEEEEECTTSSEEEEEET-------TEEEEEESSSCCS--CEECC---CTT
T ss_pred cceeEEEEeCCCCceeeeccCC-----cceEeeEECCCCCEEEEEcC-------CeEEEEeCCCCCC--ceEec---ccc
Confidence 4568999999998877665431 112223332 3455555542 4799999987 53 44433 112
Q ss_pred CCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCE-EEEEeccCCCC
Q 001901 226 GPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGL-LLLCGGRDASS 304 (998)
Q Consensus 226 ~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~-lyvfGG~~~~~ 304 (998)
....-..++...++..+++++.+.. ....+|.+|+.+. ....+.... .........+++ |++.++.++
T Consensus 83 ~~~~~~~~~~spdg~~l~~~~~~~~-~~~~l~~~~~~~~--~~~~~~~~~------~~~~~~~spdg~~l~~~~~~~~-- 151 (297)
T 2ojh_A 83 ATICNNDHGISPDGALYAISDKVEF-GKSAIYLLPSTGG--TPRLMTKNL------PSYWHGWSPDGKSFTYCGIRDQ-- 151 (297)
T ss_dssp CCCBCSCCEECTTSSEEEEEECTTT-SSCEEEEEETTCC--CCEECCSSS------SEEEEEECTTSSEEEEEEEETT--
T ss_pred ccccccceEECCCCCEEEEEEeCCC-CcceEEEEECCCC--ceEEeecCC------CccceEECCCCCEEEEEECCCC--
Confidence 1122223334444455565553322 2468999998777 444443221 112222333444 444444332
Q ss_pred CCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCE-EEEEcccCCCCCccccCCeEEEEECCCCeEEEccc
Q 001901 305 VPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NAR-LHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKS 380 (998)
Q Consensus 305 ~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~-L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~ 380 (998)
...+|.++.... ........ ......+++. +++ |++.+..++ ...+|.++..+.....+..
T Consensus 152 --~~~l~~~~~~~~---~~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~~~-------~~~i~~~~~~~~~~~~~~~ 214 (297)
T 2ojh_A 152 --VFDIYSMDIDSG---VETRLTHG---EGRNDGPDYSPDGRWIYFNSSRTG-------QMQIWRVRVDGSSVERITD 214 (297)
T ss_dssp --EEEEEEEETTTC---CEEECCCS---SSCEEEEEECTTSSEEEEEECTTS-------SCEEEEEETTSSCEEECCC
T ss_pred --ceEEEEEECCCC---cceEcccC---CCccccceECCCCCEEEEEecCCC-------CccEEEECCCCCCcEEEec
Confidence 246677665543 22222221 1111222332 454 444433222 3568999988777766543
No 76
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=93.30 E-value=4 Score=48.81 Aligned_cols=113 Identities=8% Similarity=0.034 Sum_probs=61.8
Q ss_pred cEEEEEC-CCC--cEEEecCCCCC--CCCc---cceEEEE--eCCE----EEEEeCCCCCCCCcccEEEEEcCCCCCceE
Q 001901 151 DVHCYDV-LTN--KWSRITPFGEP--PTPR---AAHVATA--VGTM----VVIQGGIGPAGLSAEDLHVLDLTQQRPRWH 216 (998)
Q Consensus 151 dv~~yD~-~t~--~W~~l~~~g~~--P~pR---~~hsa~~--~~~~----lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~ 216 (998)
.++.||. .+. .|+.-...... +.++ ...+.++ .+++ ||+... ...++.+|..+....|+
T Consensus 74 ~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~-------dg~l~AlDa~TG~~~W~ 146 (599)
T 1w6s_A 74 NTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL-------DGNVAALNAETGETVWK 146 (599)
T ss_dssp CEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT-------TSEEEEEETTTCCEEEE
T ss_pred EEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC-------CCEEEEEECCCCCEEEe
Confidence 6889999 776 48865432100 0011 1223444 4656 776532 24699999988776798
Q ss_pred EeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcc
Q 001901 217 RVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (998)
Q Consensus 217 ~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~ 272 (998)
.-... ..+......+-++.++ .+|+..+......-..++.||..+....|+.-.
T Consensus 147 ~~~~~-~~~~~~~~ssP~v~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 147 VENSD-IKVGSTLTIAPYVVKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp EECCC-GGGTCBCCSCCEEETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred ecCCC-CCccceeecCCEEECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 64311 0000011223344565 666543211111235799999999887887653
No 77
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=93.03 E-value=12 Score=45.52 Aligned_cols=114 Identities=12% Similarity=0.051 Sum_probs=64.4
Q ss_pred CcEEEEECCCCc--EEEecCCCCCCC-----CccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecC
Q 001901 150 ADVHCYDVLTNK--WSRITPFGEPPT-----PRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG 222 (998)
Q Consensus 150 ~dv~~yD~~t~~--W~~l~~~g~~P~-----pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g 222 (998)
+.++.+|..+.+ |+.-........ .....+.++.+++||+... ...++.+|..+....|+.-....
T Consensus 80 ~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-------dg~l~AlDa~TG~~~W~~~~~~~ 152 (689)
T 1yiq_A 80 SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-------DGRLEAIDAKTGQRAWSVDTRAD 152 (689)
T ss_dssp GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECCSC
T ss_pred CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc-------CCEEEEEECCCCCEeeeecCcCC
Confidence 368899998764 886432210000 0012234566788887642 24699999998776798754211
Q ss_pred CCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEc
Q 001901 223 PGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKL 271 (998)
Q Consensus 223 ~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v 271 (998)
.........+.++.++ .+|+..+......-..++.||..+....|+.-
T Consensus 153 ~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 153 HKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp TTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 1111122223345565 66663322111234579999999988789864
No 78
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=92.74 E-value=0.11 Score=59.74 Aligned_cols=69 Identities=16% Similarity=0.158 Sum_probs=40.0
Q ss_pred CeEEEecCCCCHHHHHHHHHHcC-CC-CCCCCccceeEEEeccccCCCCC-----h-HH-HHHHHHHhhhcCCCcEEEee
Q 001901 699 PIKIFGDLHGQFGDLMRLFDEYG-SP-STAGDIAYIDYLFLGDYVDRGQH-----S-LE-TITLLLALKVEYPNNVHLIR 769 (998)
Q Consensus 699 ~i~vvGDiHG~~~dL~~il~~~g-~~-~~~~~~~~~~~vfLGDyVDRG~~-----s-~e-vl~ll~~lk~~~p~~v~llr 769 (998)
++.++||+|..... .+.++.+. .+ ..+ -+|++||+++.+.. . .+ ...+|-.+.... -++.+.
T Consensus 128 ~f~~~gD~~~~~~~-~~~l~~i~~~~~~~D------~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~~~--P~~~v~ 198 (426)
T 1xzw_A 128 VFGLIGDIGQTHDS-NTTLTHYEQNSAKGQ------AVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQ--PWIWTA 198 (426)
T ss_dssp EEEEECSCTTBHHH-HHHHHHHHHCTTCCS------EEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTS--CEECCC
T ss_pred EEEEEEeCCCCCch-HHHHHHHHhCCCCCC------EEEeCCChhhcccCCcccchHHHHHHHHHHHHHhcC--CEEEec
Confidence 58899999987532 22232221 11 111 58899999975321 1 11 233344443333 499999
Q ss_pred cCccccc
Q 001901 770 GNHEAAD 776 (998)
Q Consensus 770 GNHE~~~ 776 (998)
||||...
T Consensus 199 GNHD~~~ 205 (426)
T 1xzw_A 199 GNHEIDY 205 (426)
T ss_dssp CGGGCCC
T ss_pred ccccccc
Confidence 9999864
No 79
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=92.73 E-value=4.4 Score=45.63 Aligned_cols=191 Identities=10% Similarity=0.094 Sum_probs=99.0
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CC-EEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GT-MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~-~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~ 227 (998)
..++++|+.+.+...+.... . ...+.+.. ++ .|++.+..+. ...+|++|+.+.. ...+. . ..
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~---~--~~~~~~~spdg~~la~~~~~~g----~~~i~~~d~~~~~--~~~l~---~--~~ 266 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFP---R--HNGAPAFSPDGSKLAFALSKTG----SLNLYVMDLASGQ--IRQVT---D--GR 266 (415)
T ss_dssp CEEEEEETTTCCEEEEECCS---S--CEEEEEECTTSSEEEEEECTTS----SCEEEEEETTTCC--EEECC---C--CS
T ss_pred cEEEEEECCCCcEEEeecCC---C--cccCEEEcCCCCEEEEEEecCC----CceEEEEECCCCC--EEeCc---C--CC
Confidence 48999999998887765431 1 12222222 33 5555554321 2469999998763 44443 1 11
Q ss_pred CcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCc
Q 001901 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPL 307 (998)
Q Consensus 228 R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~ 307 (998)
......+...++..+++++..+. ...+|.+|+.+. +-..+.... ......+...+++.+++++.+.. .
T Consensus 267 ~~~~~~~~spdg~~l~~~s~~~g--~~~i~~~d~~~~--~~~~l~~~~-----~~~~~~~~spdG~~l~~~~~~~g---~ 334 (415)
T 2hqs_A 267 SNNTEPTWFPDSQNLAFTSDQAG--RPQVYKVNINGG--APQRITWEG-----SQNQDADVSSDGKFMVMVSSNGG---Q 334 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTTS--SCEEEEEETTSS--CCEECCCSS-----SEEEEEEECTTSSEEEEEEECSS---C
T ss_pred CcccceEECCCCCEEEEEECCCC--CcEEEEEECCCC--CEEEEecCC-----CcccCeEECCCCCEEEEEECcCC---c
Confidence 11122233333344444443221 247999999887 434433211 12222333346666666654321 2
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccC
Q 001901 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (998)
Q Consensus 308 ~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~ 381 (998)
..++.++.... .. ...... . ...+.++. +++.+++++.++. ...++++|+.+.....+...
T Consensus 335 ~~i~~~d~~~~-~~--~~l~~~---~-~~~~~~~spdg~~l~~~s~~~~------~~~l~~~d~~g~~~~~l~~~ 396 (415)
T 2hqs_A 335 QHIAKQDLATG-GV--QVLSST---F-LDETPSLAPNGTMVIYSSSQGM------GSVLNLVSTDGRFKARLPAT 396 (415)
T ss_dssp EEEEEEETTTC-CE--EECCCS---S-SCEEEEECTTSSEEEEEEEETT------EEEEEEEETTSCCEEECCCS
T ss_pred eEEEEEECCCC-CE--EEecCC---C-CcCCeEEcCCCCEEEEEEcCCC------ccEEEEEECCCCcEEEeeCC
Confidence 45676766544 32 233321 1 22233333 5676777664332 23699999998887776543
No 80
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=92.54 E-value=13 Score=39.66 Aligned_cols=188 Identities=16% Similarity=0.117 Sum_probs=91.4
Q ss_pred CcEEEEECCCCcEEEecCCCCCCC-----CccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPT-----PRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG 222 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~-----pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g 222 (998)
+.+++||+.+.+-...-..+.... +..-++++.. ++.+|+.+... ...+++||+.+....+ .+...
T Consensus 111 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~~i~~~d~~~~~~~~-~~~~~- 183 (353)
T 3vgz_A 111 SAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK-----ESVIWVVDGGNIKLKT-AIQNT- 183 (353)
T ss_dssp TEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS-----SCEEEEEETTTTEEEE-EECCC-
T ss_pred CEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC-----CceEEEEcCCCCceEE-EecCC-
Confidence 478999998877433222211111 1112334443 34777776321 2469999998753111 11101
Q ss_pred CCCCCCcccEEEEE-CCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEe-CCEEEEEecc
Q 001901 223 PGPGPRYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS-DGLLLLCGGR 300 (998)
Q Consensus 223 ~~P~~R~~hs~~~~-~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~-~~~lyvfGG~ 300 (998)
...-+.++.. .++++|+... + +.+++||+.+....|..... ...+. ......+... ++.+|+....
T Consensus 184 ----~~~~~~~~~s~dg~~l~~~~~-~-----~~i~~~d~~~~~~~~~~~~~-~~~~~-~~~~~~~~s~dg~~l~~~~~~ 251 (353)
T 3vgz_A 184 ----GKMSTGLALDSEGKRLYTTNA-D-----GELITIDTADNKILSRKKLL-DDGKE-HFFINISLDTARQRAFITDSK 251 (353)
T ss_dssp ----CTTCCCCEEETTTTEEEEECT-T-----SEEEEEETTTTEEEEEEECC-CSSSC-CCEEEEEEETTTTEEEEEESS
T ss_pred ----CCccceEEECCCCCEEEEEcC-C-----CeEEEEECCCCeEEEEEEcC-CCCCC-cccceEEECCCCCEEEEEeCC
Confidence 1222333343 3335666543 2 47889999887433332221 11111 1111222333 4457665421
Q ss_pred CCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE--CCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEc
Q 001901 301 DASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (998)
Q Consensus 301 ~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~--~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v 378 (998)
.+.++.++..+...-..... + .+ ..+++. ++.+|+.+.. .+.+.+||+.+.+....
T Consensus 252 ------~~~v~~~d~~~~~~~~~~~~-~---~~---~~~~~s~dg~~l~v~~~~---------~~~v~~~d~~~~~~~~~ 309 (353)
T 3vgz_A 252 ------AAEVLVVDTRNGNILAKVAA-P---ES---LAVLFNPARNEAYVTHRQ---------AGKVSVIDAKSYKVVKT 309 (353)
T ss_dssp ------SSEEEEEETTTCCEEEEEEC-S---SC---CCEEEETTTTEEEEEETT---------TTEEEEEETTTTEEEEE
T ss_pred ------CCEEEEEECCCCcEEEEEEc-C---CC---ceEEECCCCCEEEEEECC---------CCeEEEEECCCCeEEEE
Confidence 24567777654422222222 1 11 123333 3467876542 34699999998876543
No 81
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=92.51 E-value=12 Score=40.02 Aligned_cols=95 Identities=9% Similarity=0.125 Sum_probs=51.0
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe--C--CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCC
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--G--TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~--~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~ 226 (998)
.+.+||+....+..+.... .....-....+ . +.+++.|+.+ ..+.+||+.+. +|..+... ..
T Consensus 34 ~i~iw~~~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~~~l~s~~~d------g~v~iwd~~~~--~~~~~~~~---~~ 99 (379)
T 3jrp_A 34 TIKIFEVEGETHKLIDTLT---GHEGPVWRVDWAHPKFGTILASCSYD------GKVLIWKEENG--RWSQIAVH---AV 99 (379)
T ss_dssp CEEEEEEETTEEEEEEEEC---CCSSCEEEEEECCGGGCSEEEEEETT------SCEEEEEEETT--EEEEEEEE---CC
T ss_pred cEEEEecCCCcceeeeEec---CCCCcEEEEEeCCCCCCCEEEEeccC------CEEEEEEcCCC--ceeEeeee---cC
Confidence 5777888766666554331 11111222232 2 4566666642 46889998876 46655532 21
Q ss_pred CCcccEEEEE-CC--cEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 227 PRYGHVMALV-GQ--RYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 227 ~R~~hs~~~~-~~--~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
....-..+.+ .+ +.+++.|+.++ .+..||+.+.
T Consensus 100 ~~~~v~~~~~~~~~~~~~l~~~~~d~-----~i~v~d~~~~ 135 (379)
T 3jrp_A 100 HSASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEFKEN 135 (379)
T ss_dssp CSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEECCTT
T ss_pred CCcceEEEEeCCCCCCCEEEEecCCC-----cEEEEecCCC
Confidence 2222223333 32 35777777654 5778888665
No 82
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=92.50 E-value=11 Score=39.87 Aligned_cols=185 Identities=10% Similarity=0.046 Sum_probs=90.1
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCC
Q 001901 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (998)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~ 226 (998)
.+.+.+||+.+.+.......+ . . ...++.- ++.+|+.+.. .+.+++||+.+....-..+. .+..
T Consensus 19 ~~~v~~~d~~~~~~~~~~~~~---~-~-~~~~~~s~dg~~l~~~~~~------~~~i~~~d~~~~~~~~~~~~-~~~~-- 84 (331)
T 3u4y_A 19 LRRISFFSTDTLEILNQITLG---Y-D-FVDTAITSDCSNVVVTSDF------CQTLVQIETQLEPPKVVAIQ-EGQS-- 84 (331)
T ss_dssp GTEEEEEETTTCCEEEEEECC---C-C-EEEEEECSSSCEEEEEEST------TCEEEEEECSSSSCEEEEEE-ECSS--
T ss_pred CCeEEEEeCcccceeeeEEcc---C-C-cceEEEcCCCCEEEEEeCC------CCeEEEEECCCCceeEEecc-cCCC--
Confidence 358899999999887655432 1 1 1133332 3367776653 24799999988642122222 2211
Q ss_pred CCcccEEEEEC-CcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCC-EEEEEeccCCCC
Q 001901 227 PRYGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDG-LLLLCGGRDASS 304 (998)
Q Consensus 227 ~R~~hs~~~~~-~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~-~lyvfGG~~~~~ 304 (998)
..++++... +++|| .+...+ ....+++||+.+. +.......+. ..+..+...++ .+|+.+..+.
T Consensus 85 --~~~~~~~s~dg~~l~-~~~~~~--~~~~i~v~d~~~~--~~~~~~~~~~-----~~~~~~~spdg~~l~~~~~~~~-- 150 (331)
T 3u4y_A 85 --SMADVDITPDDQFAV-TVTGLN--HPFNMQSYSFLKN--KFISTIPIPY-----DAVGIAISPNGNGLILIDRSSA-- 150 (331)
T ss_dssp --CCCCEEECTTSSEEE-ECCCSS--SSCEEEEEETTTT--EEEEEEECCT-----TEEEEEECTTSSCEEEEEETTT--
T ss_pred --CccceEECCCCCEEE-EecCCC--CcccEEEEECCCC--CeEEEEECCC-----CccceEECCCCCEEEEEecCCC--
Confidence 123233333 33566 333221 1137999999887 5544333222 12333344455 4776654321
Q ss_pred CCccc-EEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CC-EEEEEcccCCCCCccccCCeEEEEECCCCeE
Q 001901 305 VPLAS-AYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NA-RLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (998)
Q Consensus 305 ~~~~d-v~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~-~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W 375 (998)
. ++.|+...++...... ....+....-..+++. ++ .+|+.+.. .+.+.+||+.+.+.
T Consensus 151 ----~~i~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~spdg~~l~v~~~~---------~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 151 ----NTVRRFKIDADGVLFDTG-QEFISGGTRPFNITFTPDGNFAFVANLI---------GNSIGILETQNPEN 210 (331)
T ss_dssp ----TEEEEEEECTTCCEEEEE-EEEECSSSSEEEEEECTTSSEEEEEETT---------TTEEEEEECSSTTS
T ss_pred ----ceEEEEEECCCCcEeecC-CccccCCCCccceEECCCCCEEEEEeCC---------CCeEEEEECCCCcc
Confidence 2 3333333333221111 0000111122333333 34 47776532 34699999988775
No 83
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=92.50 E-value=4.9 Score=42.65 Aligned_cols=154 Identities=12% Similarity=0.115 Sum_probs=85.3
Q ss_pred CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 185 ~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
+.+++.|.. ...++++|..+....|+... +.....|.+.+..++.+|+.+ -+.+..||+ +.
T Consensus 5 ~~~lv~~~~------~~~v~~~d~~tG~~~w~~~~-----~~~~~~~~~~~~pdG~ilvs~-------~~~V~~~d~-~G 65 (276)
T 3no2_A 5 QHLLVGGSG------WNKIAIINKDTKEIVWEYPL-----EKGWECNSVAATKAGEILFSY-------SKGAKMITR-DG 65 (276)
T ss_dssp CEEEEECTT------CSEEEEEETTTTEEEEEEEC-----CTTCCCCEEEECTTSCEEEEC-------BSEEEEECT-TS
T ss_pred CcEEEeeCC------CCEEEEEECCCCeEEEEeCC-----CccCCCcCeEECCCCCEEEeC-------CCCEEEECC-CC
Confidence 466777653 36799999977655687654 111234555566666777732 145999999 66
Q ss_pred CceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCC-CCCcceeEEEEEC
Q 001901 265 PYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVS-PSPRYQHAAVFVN 343 (998)
Q Consensus 265 ~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~-P~pR~~hsav~~~ 343 (998)
...|+.-.... ...+.+....++++++....+ ...++.++....-.|++....... +...........+
T Consensus 66 ~~~W~~~~~~~-----~~~~~~~~~~dG~~lv~~~~~-----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~ 135 (276)
T 3no2_A 66 RELWNIAAPAG-----CEMQTARILPDGNALVAWCGH-----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKK 135 (276)
T ss_dssp CEEEEEECCTT-----CEEEEEEECTTSCEEEEEEST-----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTT
T ss_pred CEEEEEcCCCC-----ccccccEECCCCCEEEEecCC-----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCC
Confidence 67887654211 123444555677777765421 235677766433356655433211 1111112233445
Q ss_pred CEEEEEcccCCCCCccccCCeEEEEECCCC-eEE
Q 001901 344 ARLHVSGGALGGGRMVEDSSSVAVLDTAAG-VWC 376 (998)
Q Consensus 344 ~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~-~W~ 376 (998)
+.++|.... ...+.+||++-. .|+
T Consensus 136 G~~lv~~~~---------~~~v~~~d~~G~~~w~ 160 (276)
T 3no2_A 136 GNYLVPLFA---------TSEVREIAPNGQLLNS 160 (276)
T ss_dssp SCEEEEETT---------TTEEEEECTTSCEEEE
T ss_pred CCEEEEecC---------CCEEEEECCCCCEEEE
Confidence 666665432 345899998733 354
No 84
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=92.48 E-value=16 Score=44.00 Aligned_cols=112 Identities=16% Similarity=0.148 Sum_probs=64.0
Q ss_pred cEEEEECCCCc--EEEecCCCCCC-----CCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCC
Q 001901 151 DVHCYDVLTNK--WSRITPFGEPP-----TPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGP 223 (998)
Q Consensus 151 dv~~yD~~t~~--W~~l~~~g~~P-----~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~ 223 (998)
.++.+|..+.+ |+.-....... ......+.++.+++||+... ...++.+|..+....|+.-... .
T Consensus 77 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------dg~l~alD~~tG~~~W~~~~~~-~ 148 (668)
T 1kv9_A 77 RVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL-------DGRLIALDAKTGKAIWSQQTTD-P 148 (668)
T ss_dssp EEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT-------TSEEEEEETTTCCEEEEEECSC-T
T ss_pred eEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC-------CCEEEEEECCCCCEeeeeccCC-C
Confidence 68889988764 88643221000 00012234556778887542 2469999999877779875411 1
Q ss_pred CCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEc
Q 001901 224 GPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKL 271 (998)
Q Consensus 224 ~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v 271 (998)
........+.++.++ .+|+..+......-..++.||..+....|+.-
T Consensus 149 ~~~~~~~~~P~v~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 149 AKPYSITGAPRVVKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp TSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCcceecCCCEEECC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 111122233345555 66664332112234579999999988889874
No 85
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=92.36 E-value=4.8 Score=42.79 Aligned_cols=155 Identities=14% Similarity=0.018 Sum_probs=94.3
Q ss_pred eEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEE
Q 001901 178 HVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVW 257 (998)
Q Consensus 178 hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~ 257 (998)
++....++.+|+..|.. ..+.++|+.+....-+. ++..-++.+++..++ +||+.... -+.++
T Consensus 58 qGL~~~~~~Ly~stG~~------g~v~~iD~~Tgkv~~~~------l~~~~FgeGit~~g~-~Ly~ltw~-----~~~v~ 119 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQ------GTLRQLSLESAQPVWME------RLGNIFAEGLASDGE-RLYQLTWT-----EGLLF 119 (268)
T ss_dssp EEEEEETTEEEEEETTT------TEEEECCSSCSSCSEEE------ECTTCCEEEEEECSS-CEEEEESS-----SCEEE
T ss_pred ceEEEECCEEEEEcCCC------CEEEEEECCCCcEEeEE------CCCCcceeEEEEeCC-EEEEEEcc-----CCEEE
Confidence 56667788999999863 23889999986422222 233445666777776 89998654 35899
Q ss_pred EEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCc-ce
Q 001901 258 ALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPR-YQ 336 (998)
Q Consensus 258 ~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR-~~ 336 (998)
+||+.+. +-..--+.. + ...+.+..+++||+.-| .+.++.+|+.+...-.-..+... +.+. .-
T Consensus 120 V~D~~Tl--~~~~ti~~~--~----eGwGLt~Dg~~L~vSdG-------s~~l~~iDp~T~~v~~~I~V~~~-g~~v~~l 183 (268)
T 3nok_A 120 TWSGMPP--QRERTTRYS--G----EGWGLCYWNGKLVRSDG-------GTMLTFHEPDGFALVGAVQVKLR-GQPVELI 183 (268)
T ss_dssp EEETTTT--EEEEEEECS--S----CCCCEEEETTEEEEECS-------SSEEEEECTTTCCEEEEEECEET-TEECCCE
T ss_pred EEECCcC--cEEEEEeCC--C----ceeEEecCCCEEEEECC-------CCEEEEEcCCCCeEEEEEEeCCC-Ccccccc
Confidence 9999887 433221111 1 12344466788999854 24577787776533333444321 1221 11
Q ss_pred eEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeE
Q 001901 337 HAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (998)
Q Consensus 337 hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W 375 (998)
.-....+++||+-- -..++|.+.|+++.+-
T Consensus 184 NeLe~~dG~lyanv---------w~s~~I~vIDp~TG~V 213 (268)
T 3nok_A 184 NELECANGVIYANI---------WHSSDVLEIDPATGTV 213 (268)
T ss_dssp EEEEEETTEEEEEE---------TTCSEEEEECTTTCBE
T ss_pred cccEEeCCEEEEEE---------CCCCeEEEEeCCCCcE
Confidence 22445588888631 1256899999999863
No 86
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=92.32 E-value=3.8 Score=44.20 Aligned_cols=197 Identities=10% Similarity=0.115 Sum_probs=95.4
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-C--CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCC
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-G--TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~--~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~ 227 (998)
.+.+||+.+.+|..+..... ....-.+++.. . +.+++.|+. ...+.+||+.+.. ........+ ..
T Consensus 80 ~v~iwd~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~------d~~i~v~d~~~~~-~~~~~~~~~---~~ 147 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHAV--HSASVNSVQWAPHEYGPLLLVASS------DGKVSVVEFKENG-TTSPIIIDA---HA 147 (379)
T ss_dssp CEEEEEEETTEEEEEEEECC--CSSCEEEEEECCGGGCSEEEEEET------TSEEEEEECCTTS-CCCEEEEEC---CT
T ss_pred EEEEEEcCCCceeEeeeecC--CCcceEEEEeCCCCCCCEEEEecC------CCcEEEEecCCCC-ceeeEEecC---CC
Confidence 67889999998876654411 11111222222 2 456666654 2468899988752 122211111 11
Q ss_pred CcccEEEEEC-------------CcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeC---
Q 001901 228 RYGHVMALVG-------------QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSD--- 291 (998)
Q Consensus 228 R~~hs~~~~~-------------~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~--- 291 (998)
..-.+++... ++.+++.|+.++ .+..||+.+....|..+...... .......+...+
T Consensus 148 ~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~h--~~~v~~~~~sp~~~~ 220 (379)
T 3jrp_A 148 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGH--SDWVRDVAWSPTVLL 220 (379)
T ss_dssp TCEEEEEECCCC----------CTTCEEEEEETTS-----CEEEEEEETTTTEEEEEEEECCC--SSCEEEEEECCCCSS
T ss_pred CceEEEEEcCccccccccccCCCCCCEEEEEeCCC-----eEEEEEecCCCcceeeEEEEecc--cCcEeEEEECCCCCC
Confidence 1112222222 246777887765 57777776554356554332210 011122222334
Q ss_pred CEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEEC
Q 001901 292 GLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDT 370 (998)
Q Consensus 292 ~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~ 370 (998)
+.+++.|+.++. ..+|.+..... .+........ .....-.++++. ++.++++|+.++ .+.+||.
T Consensus 221 ~~~l~s~~~dg~----i~iwd~~~~~~-~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~~~~dg---------~i~iw~~ 285 (379)
T 3jrp_A 221 RSYLASVSQDRT----CIIWTQDNEQG-PWKKTLLKEE-KFPDVLWRASWSLSGNVLALSGGDN---------KVTLWKE 285 (379)
T ss_dssp SEEEEEEETTSC----EEEEEESSTTS-CCEEEESSSS-CCSSCEEEEEECSSSCCEEEEESSS---------SEEEEEE
T ss_pred CCeEEEEeCCCE----EEEEeCCCCCc-cceeeeeccc-cCCCcEEEEEEcCCCCEEEEecCCC---------cEEEEeC
Confidence 788888886543 23444433211 2222222221 111122223332 567777776532 3667776
Q ss_pred C-CCeEEEcccC
Q 001901 371 A-AGVWCDTKSV 381 (998)
Q Consensus 371 ~-t~~W~~v~~~ 381 (998)
. ..+|..+...
T Consensus 286 ~~~~~~~~~~~~ 297 (379)
T 3jrp_A 286 NLEGKWEPAGEV 297 (379)
T ss_dssp EETTEEEEEEEE
T ss_pred CCCCccccccce
Confidence 5 5688877765
No 87
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=92.14 E-value=18 Score=40.43 Aligned_cols=175 Identities=15% Similarity=0.126 Sum_probs=85.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCc
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~ 229 (998)
+.+.+||..+.+-...-.. ....-.+...++.+++.|+.+ ..+.+||+.+.. -.... .....
T Consensus 153 g~i~iwd~~~~~~~~~~~~-----h~~~v~~l~~~~~~l~sg~~d------g~i~vwd~~~~~--~~~~~-----~~h~~ 214 (435)
T 1p22_A 153 NTIKIWDKNTLECKRILTG-----HTGSVLCLQYDERVIITGSSD------STVRVWDVNTGE--MLNTL-----IHHCE 214 (435)
T ss_dssp SCEEEEESSSCCEEEEECC-----CSSCEEEEECCSSEEEEEETT------SCEEEEESSSCC--EEEEE-----CCCCS
T ss_pred CeEEEEeCCCCeEEEEEcC-----CCCcEEEEEECCCEEEEEcCC------CeEEEEECCCCc--EEEEE-----cCCCC
Confidence 3678899887664433221 111223334466677777642 469999998763 22111 11122
Q ss_pred ccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceE-EEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcc
Q 001901 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEW-RKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (998)
Q Consensus 230 ~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W-~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~ 308 (998)
.-.++.+.+ .+++.|+.++ .+..||+.+..... ..... +. .....++.. ++..++.|+.++
T Consensus 215 ~v~~l~~~~-~~l~s~s~dg-----~i~vwd~~~~~~~~~~~~~~-~~----~~~v~~~~~-~~~~l~s~~~dg------ 276 (435)
T 1p22_A 215 AVLHLRFNN-GMMVTCSKDR-----SIAVWDMASPTDITLRRVLV-GH----RAAVNVVDF-DDKYIVSASGDR------ 276 (435)
T ss_dssp CEEEEECCT-TEEEEEETTS-----CEEEEECSSSSCCEEEEEEC-CC----SSCEEEEEE-ETTEEEEEETTS------
T ss_pred cEEEEEEcC-CEEEEeeCCC-----cEEEEeCCCCCCceeeeEec-CC----CCcEEEEEe-CCCEEEEEeCCC------
Confidence 223334455 4777777664 57788887652111 11111 11 111222333 555666666432
Q ss_pred cEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeE
Q 001901 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (998)
Q Consensus 309 dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W 375 (998)
.+..++.... .-.... .+. ...-.++.+++.+++.|+.+ ..+.+||..+.+-
T Consensus 277 ~i~vwd~~~~-~~~~~~-~~~----~~~v~~~~~~~~~l~~g~~d---------g~i~iwd~~~~~~ 328 (435)
T 1p22_A 277 TIKVWNTSTC-EFVRTL-NGH----KRGIACLQYRDRLVVSGSSD---------NTIRLWDIECGAC 328 (435)
T ss_dssp EEEEEETTTC-CEEEEE-ECC----SSCEEEEEEETTEEEEEETT---------SCEEEEETTTCCE
T ss_pred eEEEEECCcC-cEEEEE-cCC----CCcEEEEEeCCCEEEEEeCC---------CeEEEEECCCCCE
Confidence 2334443332 111111 111 11123334456677777753 3488999987653
No 88
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=91.94 E-value=17 Score=39.96 Aligned_cols=188 Identities=15% Similarity=0.105 Sum_probs=88.7
Q ss_pred cCCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCC
Q 001901 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (998)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~ 227 (998)
....+.+||+.+.+....-.. . ...-.....++.+++.|+.+ ..+.+||+......-..+. + ..
T Consensus 154 ~dg~i~iwd~~~~~~~~~~~~---~--~~~v~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~--~---~~ 217 (401)
T 4aez_A 154 GNGLVDIYDVESQTKLRTMAG---H--QARVGCLSWNRHVLSSGSRS------GAIHHHDVRIANHQIGTLQ--G---HS 217 (401)
T ss_dssp TTSCEEEEETTTCCEEEEECC---C--SSCEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEE--C---CS
T ss_pred CCCeEEEEECcCCeEEEEecC---C--CCceEEEEECCCEEEEEcCC------CCEEEEecccCcceeeEEc--C---CC
Confidence 345788899887764433221 1 11222233345566666642 5689999985321122221 1 11
Q ss_pred CcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEe--CCEEEEEeccCCCCC
Q 001901 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS--DGLLLLCGGRDASSV 305 (998)
Q Consensus 228 R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~--~~~lyvfGG~~~~~~ 305 (998)
..-.++....++.+++.|+.++ .+..||+.+....+...... ....++... +..+++.||...+
T Consensus 218 ~~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~~~~~~~~~~~-------~~v~~~~~~p~~~~ll~~~~gs~d-- 283 (401)
T 4aez_A 218 SEVCGLAWRSDGLQLASGGNDN-----VVQIWDARSSIPKFTKTNHN-------AAVKAVAWCPWQSNLLATGGGTMD-- 283 (401)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEETTCSSEEEEECCCS-------SCCCEEEECTTSTTEEEEECCTTT--
T ss_pred CCeeEEEEcCCCCEEEEEeCCC-----eEEEccCCCCCccEEecCCc-------ceEEEEEECCCCCCEEEEecCCCC--
Confidence 1122333333446777887664 68889998763233322111 111222222 4567777652222
Q ss_pred CcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CC-EEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccC
Q 001901 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NA-RLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (998)
Q Consensus 306 ~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~-~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~ 381 (998)
..+..|+......-...... ..-.++++. ++ .+++.+|.. ...+.+||..+..+..+..+
T Consensus 284 --~~i~i~d~~~~~~~~~~~~~------~~v~~~~~s~~~~~l~~~~g~~--------dg~i~v~~~~~~~~~~~~~~ 345 (401)
T 4aez_A 284 --KQIHFWNAATGARVNTVDAG------SQVTSLIWSPHSKEIMSTHGFP--------DNNLSIWSYSSSGLTKQVDI 345 (401)
T ss_dssp --CEEEEEETTTCCEEEEEECS------SCEEEEEECSSSSEEEEEECTT--------TCEEEEEEEETTEEEEEEEE
T ss_pred --CEEEEEECCCCCEEEEEeCC------CcEEEEEECCCCCeEEEEeecC--------CCcEEEEecCCccceeEEEe
Confidence 23444544433111111111 111222222 33 454444432 24588899888777665443
No 89
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=91.94 E-value=6.6 Score=41.58 Aligned_cols=181 Identities=9% Similarity=0.083 Sum_probs=94.5
Q ss_pred CcEEEEECCCCc--EEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCC
Q 001901 150 ADVHCYDVLTNK--WSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (998)
Q Consensus 150 ~dv~~yD~~t~~--W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~ 226 (998)
+.++++|..+.+ |+.-... ....|.+.+. ++.+|+.+ .+.++.||. +....|+.-. +.
T Consensus 15 ~~v~~~d~~tG~~~w~~~~~~-----~~~~~~~~~~pdG~ilvs~--------~~~V~~~d~-~G~~~W~~~~-----~~ 75 (276)
T 3no2_A 15 NKIAIINKDTKEIVWEYPLEK-----GWECNSVAATKAGEILFSY--------SKGAKMITR-DGRELWNIAA-----PA 75 (276)
T ss_dssp SEEEEEETTTTEEEEEEECCT-----TCCCCEEEECTTSCEEEEC--------BSEEEEECT-TSCEEEEEEC-----CT
T ss_pred CEEEEEECCCCeEEEEeCCCc-----cCCCcCeEECCCCCEEEeC--------CCCEEEECC-CCCEEEEEcC-----CC
Confidence 478899987775 7654321 1123444444 55777732 245999999 4444677543 22
Q ss_pred CCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCC-CCCCccceEEEEEeCCEEEEEeccCCCCC
Q 001901 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGE-GPPPCMYATASARSDGLLLLCGGRDASSV 305 (998)
Q Consensus 227 ~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~-~P~~r~~~~a~~~~~~~lyvfGG~~~~~~ 305 (998)
...-+++....++.+++....+ ...++.+|+. ....|+....... .+.. ..+.+....++.+++....
T Consensus 76 ~~~~~~~~~~~dG~~lv~~~~~----~~~v~~vd~~-Gk~l~~~~~~~~~~~~~~-~~~~v~~~~~G~~lv~~~~----- 144 (276)
T 3no2_A 76 GCEMQTARILPDGNALVAWCGH----PSTILEVNMK-GEVLSKTEFETGIERPHA-QFRQINKNKKGNYLVPLFA----- 144 (276)
T ss_dssp TCEEEEEEECTTSCEEEEEEST----TEEEEEECTT-SCEEEEEEECCSCSSGGG-SCSCCEECTTSCEEEEETT-----
T ss_pred CccccccEECCCCCEEEEecCC----CCEEEEEeCC-CCEEEEEeccCCCCcccc-cccCceECCCCCEEEEecC-----
Confidence 2234555556555566654321 1367888874 3345654322111 1111 1112233446666665432
Q ss_pred CcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCe--EEE
Q 001901 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGV--WCD 377 (998)
Q Consensus 306 ~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~--W~~ 377 (998)
...+..|+.. ++..|....+.. .+++... ++.++|.+.. ...+..||+.+.+ |+.
T Consensus 145 -~~~v~~~d~~--G~~~w~~~~~~~-----~~~~~~~~~g~~~v~~~~---------~~~v~~~d~~tG~~~w~~ 202 (276)
T 3no2_A 145 -TSEVREIAPN--GQLLNSVKLSGT-----PFSSAFLDNGDCLVACGD---------AHCFVQLNLESNRIVRRV 202 (276)
T ss_dssp -TTEEEEECTT--SCEEEEEECSSC-----CCEEEECTTSCEEEECBT---------TSEEEEECTTTCCEEEEE
T ss_pred -CCEEEEECCC--CCEEEEEECCCC-----ccceeEcCCCCEEEEeCC---------CCeEEEEeCcCCcEEEEe
Confidence 2357777766 444444333221 1234444 6788887653 2348999999664 654
No 90
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=91.42 E-value=19 Score=39.42 Aligned_cols=93 Identities=11% Similarity=0.080 Sum_probs=49.1
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCc
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~ 229 (998)
.+.+||+.+..-...-.. ....-.+++.. ++.+++.|+.+ ..+.+||+.+.. .-..+. + ....
T Consensus 120 ~i~iwd~~~~~~~~~~~~----h~~~v~~~~~~~~~~~l~s~s~d------~~i~iwd~~~~~-~~~~~~--~---h~~~ 183 (420)
T 3vl1_A 120 DIKVLDSNFNLQREIDQA----HVSEITKLKFFPSGEALISSSQD------MQLKIWSVKDGS-NPRTLI--G---HRAT 183 (420)
T ss_dssp CEEEECTTSCEEEEETTS----SSSCEEEEEECTTSSEEEEEETT------SEEEEEETTTCC-CCEEEE--C---CSSC
T ss_pred CEEEEeCCCcceeeeccc----ccCccEEEEECCCCCEEEEEeCC------CeEEEEeCCCCc-CceEEc--C---CCCc
Confidence 678888887665444211 11112223333 34566666642 469999998753 112221 1 1111
Q ss_pred ccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 230 ~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
-.+++...++.+++.|+.++ .+..||+.+.
T Consensus 184 v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~ 213 (420)
T 3vl1_A 184 VTDIAIIDRGRNVLSASLDG-----TIRLWECGTG 213 (420)
T ss_dssp EEEEEEETTTTEEEEEETTS-----CEEEEETTTT
T ss_pred EEEEEEcCCCCEEEEEcCCC-----cEEEeECCCC
Confidence 22334444445677777664 5788898876
No 91
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=91.32 E-value=8.6 Score=42.60 Aligned_cols=193 Identities=10% Similarity=-0.016 Sum_probs=92.2
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCc
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~ 229 (998)
.+|.+|..+..+..+... +....-++++.. ++.+++.++.+ ..+++||+.+.. .......+.......
T Consensus 102 ~l~~~d~~~~~~~~~~~~---~~~~~~~~~~~s~~~~~~~~~~~~------~~i~~~d~~~g~--~~~~~~~~~~~~~~~ 170 (433)
T 3bws_A 102 KLIALDKEGITHRFISRF---KTGFQPKSVRFIDNTRLAIPLLED------EGMDVLDINSGQ--TVRLSPPEKYKKKLG 170 (433)
T ss_dssp CEEECCBTTCSEEEEEEE---ECSSCBCCCEESSSSEEEEEBTTS------SSEEEEETTTCC--EEEECCCHHHHTTCC
T ss_pred EEEEECCCCCcceEEEEE---cCCCCceEEEEeCCCeEEEEeCCC------CeEEEEECCCCe--EeeecCcccccccCC
Confidence 788888877766655432 111112223333 56777777642 359999998763 333221101111111
Q ss_pred c-cEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEe-CCEEEEEeccCCCCCCc
Q 001901 230 G-HVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS-DGLLLLCGGRDASSVPL 307 (998)
Q Consensus 230 ~-hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~-~~~lyvfGG~~~~~~~~ 307 (998)
. .+++.-.++.+|+.|+.+ ..+.+||+.+....+... .... .....+... +..+|+.++.+
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d-----~~v~~~d~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~l~~~~~~~------ 233 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQA-----NAVHVFDLKTLAYKATVD-LTGK-----WSKILLYDPIRDLVYCSNWIS------ 233 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGG-----TEEEEEETTTCCEEEEEE-CSSS-----SEEEEEEETTTTEEEEEETTT------
T ss_pred ceeEEEEcCCCEEEEEECCC-----CEEEEEECCCceEEEEEc-CCCC-----CeeEEEEcCCCCEEEEEecCC------
Confidence 1 122222344778777654 368899998763333322 1111 112222233 44566666433
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEc
Q 001901 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (998)
Q Consensus 308 ~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v 378 (998)
..++.++.... +..+.. . ....-.++++. +++.+++++...... ......+++||+.+.+-...
T Consensus 234 ~~i~~~d~~~~-~~~~~~-~----~~~~~~~~~~~~~g~~l~~~~~~~~~~-~~~dg~i~~~d~~~~~~~~~ 298 (433)
T 3bws_A 234 EDISVIDRKTK-LEIRKT-D----KIGLPRGLLLSKDGKELYIAQFSASNQ-ESGGGRLGIYSMDKEKLIDT 298 (433)
T ss_dssp TEEEEEETTTT-EEEEEC-C----CCSEEEEEEECTTSSEEEEEEEESCTT-CSCCEEEEEEETTTTEEEEE
T ss_pred CcEEEEECCCC-cEEEEe-c----CCCCceEEEEcCCCCEEEEEECCCCcc-ccCCCeEEEEECCCCcEEee
Confidence 24566665533 322221 1 11122333333 454444444322111 01135799999988865443
No 92
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=90.89 E-value=19 Score=38.29 Aligned_cols=191 Identities=10% Similarity=0.023 Sum_probs=93.7
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCC
Q 001901 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (998)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~ 226 (998)
.+.++++|+.+.+....-..+.. .++++.. ++.+|+.++. .+.+++||+.+....+. +. .+....
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~v~~~~------~~~v~~~d~~~~~~~~~-~~-~~~~~~ 134 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDLK-----PFGATINNTTQTLWFGNTV------NSAVTAIDAKTGEVKGR-LV-LDDRKR 134 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESSC-----CCSEEEETTTTEEEEEETT------TTEEEEEETTTCCEEEE-EE-SCCCCC
T ss_pred CccEEEEcCCCCeEEEEEecCCC-----cceEEECCCCCEEEEEecC------CCEEEEEeCCCCeeEEE-Ee-cCCCcc
Confidence 45799999998865444332211 2333333 3468877653 24799999988642222 22 111111
Q ss_pred -----CCcccEEEEEC-CcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeC-CEEEEEec
Q 001901 227 -----PRYGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSD-GLLLLCGG 299 (998)
Q Consensus 227 -----~R~~hs~~~~~-~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~-~~lyvfGG 299 (998)
+..-+.+++-. ++.+|+.+... -..+++||+.+....+.. ...+.. ....+...+ +.+|+...
T Consensus 135 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~----~~~i~~~d~~~~~~~~~~-~~~~~~-----~~~~~~s~dg~~l~~~~~ 204 (353)
T 3vgz_A 135 TEEVRPLQPRELVADDATNTVYISGIGK----ESVIWVVDGGNIKLKTAI-QNTGKM-----STGLALDSEGKRLYTTNA 204 (353)
T ss_dssp CSSCCCCEEEEEEEETTTTEEEEEEESS----SCEEEEEETTTTEEEEEE-CCCCTT-----CCCCEEETTTTEEEEECT
T ss_pred ccccCCCCCceEEECCCCCEEEEEecCC----CceEEEEcCCCCceEEEe-cCCCCc-----cceEEECCCCCEEEEEcC
Confidence 11123344433 33677765221 246999999887333322 111111 112223334 45666532
Q ss_pred cCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE--CCEEEEEcccCCCCCccccCCeEEEEECCCCeEEE
Q 001901 300 RDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (998)
Q Consensus 300 ~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~--~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~ 377 (998)
...++.++.... +-.+....+.........++++. ++.+|+.... .+.+++||+.+.+...
T Consensus 205 -------~~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~---------~~~v~~~d~~~~~~~~ 267 (353)
T 3vgz_A 205 -------DGELITIDTADN-KILSRKKLLDDGKEHFFINISLDTARQRAFITDSK---------AAEVLVVDTRNGNILA 267 (353)
T ss_dssp -------TSEEEEEETTTT-EEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS---------SSEEEEEETTTCCEEE
T ss_pred -------CCeEEEEECCCC-eEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC---------CCEEEEEECCCCcEEE
Confidence 135566666544 32222222111111222233443 4567776421 3569999999887654
Q ss_pred cc
Q 001901 378 TK 379 (998)
Q Consensus 378 v~ 379 (998)
.-
T Consensus 268 ~~ 269 (353)
T 3vgz_A 268 KV 269 (353)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 93
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=90.69 E-value=11 Score=44.91 Aligned_cols=111 Identities=16% Similarity=0.260 Sum_probs=61.2
Q ss_pred cEEEEECCCCc--EEEecCCCCCCCCc---cceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCC
Q 001901 151 DVHCYDVLTNK--WSRITPFGEPPTPR---AAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (998)
Q Consensus 151 dv~~yD~~t~~--W~~l~~~g~~P~pR---~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P 225 (998)
.++.||..+.+ |+.-........+. ...+.++.+++||+... ...++.+|..+....|+.-.. .+
T Consensus 79 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~-------dg~l~AlD~~TG~~~W~~~~~---~~ 148 (582)
T 1flg_A 79 RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL-------DASVVALNKNTGKVVWKKKFA---DH 148 (582)
T ss_dssp EEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET-------TTEEEEEESSSCCEEEEEECS---CG
T ss_pred CEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC-------CCEEEEEECCCCCEEeeecCC---CC
Confidence 38889988764 88754331100011 11334567888887542 246999999987777986431 11
Q ss_pred CCCc--ccEEEEECC----cEEEEEcCCCC-CCCcccEEEEECCCCCceEEEc
Q 001901 226 GPRY--GHVMALVGQ----RYLMAIGGNDG-KRPLADVWALDTAAKPYEWRKL 271 (998)
Q Consensus 226 ~~R~--~hs~~~~~~----~~Lyv~GG~~g-~~~lndv~~yD~~s~~~~W~~v 271 (998)
...+ ..+-++.++ +.++++|...+ ...-..++.||..+....|+.-
T Consensus 149 ~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~ 201 (582)
T 1flg_A 149 GAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRP 201 (582)
T ss_dssp GGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEE
T ss_pred CcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecC
Confidence 1111 112233332 11344443211 1124579999999988899764
No 94
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=90.27 E-value=11 Score=41.53 Aligned_cols=183 Identities=14% Similarity=0.130 Sum_probs=89.5
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
+.+++||..+.+...+.... ....-.+++.. ++.+++.|+.+ ..+.+||+.+.. ..... ....
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~---~~~~v~~v~~s~~~~~l~~~~~d------g~i~iwd~~~~~--~~~~~-----~~~~ 176 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETD---ESTYVASVKWSHDGSFLSVGLGN------GLVDIYDVESQT--KLRTM-----AGHQ 176 (401)
T ss_dssp TEEEEEETTTCCEEEEEECC---TTCCEEEEEECTTSSEEEEEETT------SCEEEEETTTCC--EEEEE-----CCCS
T ss_pred CeEEEeeCCCCcEeEeeecC---CCCCEEEEEECCCCCEEEEECCC------CeEEEEECcCCe--EEEEe-----cCCC
Confidence 47899999988876665431 11112222222 34566666542 468999998753 22211 1112
Q ss_pred cccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcc
Q 001901 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (998)
Q Consensus 229 ~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~ 308 (998)
..-.++.+.+ .+++.|+.++ .+..||+......-..+.... ..........++.+++.|+.++
T Consensus 177 ~~v~~~~~~~-~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~s~~~d~------ 239 (401)
T 4aez_A 177 ARVGCLSWNR-HVLSSGSRSG-----AIHHHDVRIANHQIGTLQGHS-----SEVCGLAWRSDGLQLASGGNDN------ 239 (401)
T ss_dssp SCEEEEEEET-TEEEEEETTS-----EEEEEETTSSSCEEEEEECCS-----SCEEEEEECTTSSEEEEEETTS------
T ss_pred CceEEEEECC-CEEEEEcCCC-----CEEEEecccCcceeeEEcCCC-----CCeeEEEEcCCCCEEEEEeCCC------
Confidence 2223334444 5777777654 678888874321222221111 1112222233677777877643
Q ss_pred cEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE--CCEEEEEcccCCCCCccccCCeEEEEECCCCeEEE
Q 001901 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (998)
Q Consensus 309 dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~--~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~ 377 (998)
.+..|+.... .-...... ....-.++++. +..+++.||... ...+.+||..+.+...
T Consensus 240 ~v~iwd~~~~-~~~~~~~~----~~~~v~~~~~~p~~~~ll~~~~gs~-------d~~i~i~d~~~~~~~~ 298 (401)
T 4aez_A 240 VVQIWDARSS-IPKFTKTN----HNAAVKAVAWCPWQSNLLATGGGTM-------DKQIHFWNAATGARVN 298 (401)
T ss_dssp CEEEEETTCS-SEEEEECC----CSSCCCEEEECTTSTTEEEEECCTT-------TCEEEEEETTTCCEEE
T ss_pred eEEEccCCCC-CccEEecC----CcceEEEEEECCCCCCEEEEecCCC-------CCEEEEEECCCCCEEE
Confidence 2344444322 11221111 11112233333 346777775211 2458999998876543
No 95
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=90.07 E-value=16 Score=38.32 Aligned_cols=149 Identities=15% Similarity=0.060 Sum_probs=72.0
Q ss_pred CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCc-ccEEEEECCcEEEEEcCCCCCCCcccEEEEECCC
Q 001901 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY-GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (998)
Q Consensus 185 ~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~-~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s 263 (998)
+..++.|+. ...+.+||+.+.. +...... ..... -.+++...++.+++.|+.++ .+..||+.+
T Consensus 109 ~~~l~~~~~------d~~i~~~d~~~~~--~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~dg-----~v~~~d~~~ 172 (337)
T 1gxr_A 109 GCTLIVGGE------ASTLSIWDLAAPT--PRIKAEL---TSSAPACYALAISPDSKVCFSCCSDG-----NIAVWDLHN 172 (337)
T ss_dssp SSEEEEEES------SSEEEEEECCCC----EEEEEE---ECSSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTT
T ss_pred CCEEEEEcC------CCcEEEEECCCCC--cceeeec---ccCCCceEEEEECCCCCEEEEEeCCC-----cEEEEeCCC
Confidence 455666654 2469999998753 3222211 11111 12333333445777777654 588899987
Q ss_pred CCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-
Q 001901 264 KPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV- 342 (998)
Q Consensus 264 ~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~- 342 (998)
. +....-.... ..........++..++.|+.++ .+..|+.... .-..... ....-.++++.
T Consensus 173 ~--~~~~~~~~~~----~~i~~~~~~~~~~~l~~~~~dg------~i~~~d~~~~-~~~~~~~-----~~~~v~~~~~s~ 234 (337)
T 1gxr_A 173 Q--TLVRQFQGHT----DGASCIDISNDGTKLWTGGLDN------TVRSWDLREG-RQLQQHD-----FTSQIFSLGYCP 234 (337)
T ss_dssp T--EEEEEECCCS----SCEEEEEECTTSSEEEEEETTS------EEEEEETTTT-EEEEEEE-----CSSCEEEEEECT
T ss_pred C--ceeeeeeccc----CceEEEEECCCCCEEEEEecCC------cEEEEECCCC-ceEeeec-----CCCceEEEEECC
Confidence 7 4433221111 1112222333666777776432 3445554433 1111111 11112233332
Q ss_pred CCEEEEEcccCCCCCccccCCeEEEEECCCCeEE
Q 001901 343 NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (998)
Q Consensus 343 ~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~ 376 (998)
++.++++|+.+ ..+.+||..+.+-.
T Consensus 235 ~~~~l~~~~~~---------~~i~~~~~~~~~~~ 259 (337)
T 1gxr_A 235 TGEWLAVGMES---------SNVEVLHVNKPDKY 259 (337)
T ss_dssp TSSEEEEEETT---------SCEEEEETTSSCEE
T ss_pred CCCEEEEEcCC---------CcEEEEECCCCCeE
Confidence 56677777643 34889999887643
No 96
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=89.75 E-value=29 Score=38.68 Aligned_cols=180 Identities=12% Similarity=0.062 Sum_probs=86.9
Q ss_pred cCCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCC
Q 001901 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (998)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~ 227 (998)
.-..+.+||+.+.+-...-.. ....-.+..+++..++.|+. ...+.+||+.+.. .+.. +...
T Consensus 217 ~dg~i~~wd~~~~~~~~~~~~-----~~~~v~~~~~~~~~l~~~~~------dg~i~iwd~~~~~----~~~~---~~~~ 278 (445)
T 2ovr_B 217 RDATLRVWDIETGQCLHVLMG-----HVAAVRCVQYDGRRVVSGAY------DFMVKVWDPETET----CLHT---LQGH 278 (445)
T ss_dssp TTSEEEEEESSSCCEEEEEEC-----CSSCEEEEEECSSCEEEEET------TSCEEEEEGGGTE----EEEE---ECCC
T ss_pred CCCEEEEEECCCCcEEEEEcC-----CcccEEEEEECCCEEEEEcC------CCEEEEEECCCCc----EeEE---ecCC
Confidence 345677788776653322111 01112233335555666654 2468899987742 2221 1111
Q ss_pred CcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCc
Q 001901 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPL 307 (998)
Q Consensus 228 R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~ 307 (998)
...-.++.+.+ ..++.|+.++ .+..||+.+....+..... .....+... ++.+++.|+.++
T Consensus 279 ~~~v~~~~~~~-~~l~~~~~d~-----~i~i~d~~~~~~~~~~~~~-------~~~v~~~~~-~~~~l~~~~~dg----- 339 (445)
T 2ovr_B 279 TNRVYSLQFDG-IHVVSGSLDT-----SIRVWDVETGNCIHTLTGH-------QSLTSGMEL-KDNILVSGNADS----- 339 (445)
T ss_dssp SSCEEEEEECS-SEEEEEETTS-----CEEEEETTTCCEEEEECCC-------CSCEEEEEE-ETTEEEEEETTS-----
T ss_pred CCceEEEEECC-CEEEEEeCCC-----eEEEEECCCCCEEEEEcCC-------cccEEEEEE-eCCEEEEEeCCC-----
Confidence 12223333454 5667777654 5888999877322222111 111222333 445666666543
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEE
Q 001901 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (998)
Q Consensus 308 ~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~ 377 (998)
.+..++.... .-.... .+.. .....-.++.+++.+++.|+.+ ..+.+||..+.+...
T Consensus 340 -~i~vwd~~~~-~~~~~~-~~~~-~~~~~v~~~~~~~~~l~s~~~d---------g~v~iwd~~~~~~~~ 396 (445)
T 2ovr_B 340 -TVKIWDIKTG-QCLQTL-QGPN-KHQSAVTCLQFNKNFVITSSDD---------GTVKLWDLKTGEFIR 396 (445)
T ss_dssp -CEEEEETTTC-CEEEEE-CSTT-SCSSCEEEEEECSSEEEEEETT---------SEEEEEETTTCCEEE
T ss_pred -eEEEEECCCC-cEEEEE-ccCC-CCCCCEEEEEECCCEEEEEeCC---------CeEEEEECCCCceee
Confidence 2344444332 212111 1110 1112223344467777777753 348899999887543
No 97
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=89.10 E-value=27 Score=37.47 Aligned_cols=179 Identities=15% Similarity=0.100 Sum_probs=81.9
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeee-cCCCCCC
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVV-QGPGPGP 227 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~-~g~~P~~ 227 (998)
.+.++|..+..-...-.. ....-..+.+ ++..++.||.+ ..+.+||+.+.......... .+. .
T Consensus 78 ~v~iWd~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~s~~~d------~~v~iw~~~~~~~~~~~~~~~~~h---~ 143 (340)
T 1got_B 78 KLIIWDSYTTNKVHAIPL-----RSSWVMTCAYAPSGNYVACGGLD------NICSIYNLKTREGNVRVSRELAGH---T 143 (340)
T ss_dssp EEEEEETTTCCEEEEEEC-----SSSCEEEEEECTTSSEEEEEETT------CEEEEEETTTCSBSCEEEEEEECC---S
T ss_pred cEEEEECCCCCcceEeec-----CCccEEEEEECCCCCEEEEEeCC------CeEEEEECccCCCcceeEEEecCC---C
Confidence 677888877653322111 0111122222 34666667652 46888998764322222211 111 1
Q ss_pred CcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCc
Q 001901 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPL 307 (998)
Q Consensus 228 R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~ 307 (998)
..-.++....++. ++.|+.++ .+..||+.+. +-...-.... ..........++.+++.|+.++.
T Consensus 144 ~~v~~~~~~~~~~-l~s~s~d~-----~i~~wd~~~~--~~~~~~~~h~----~~v~~~~~~~~~~~l~sg~~d~~---- 207 (340)
T 1got_B 144 GYLSCCRFLDDNQ-IVTSSGDT-----TCALWDIETG--QQTTTFTGHT----GDVMSLSLAPDTRLFVSGACDAS---- 207 (340)
T ss_dssp SCEEEEEEEETTE-EEEEETTS-----CEEEEETTTT--EEEEEECCCS----SCEEEEEECTTSSEEEEEETTSC----
T ss_pred ccEEEEEECCCCc-EEEEECCC-----cEEEEECCCC--cEEEEEcCCC----CceEEEEECCCCCEEEEEeCCCc----
Confidence 1111222333434 55555543 5788899877 4332211111 11122223346778888876542
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCeE
Q 001901 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (998)
Q Consensus 308 ~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W 375 (998)
+..++.... .-.. ...+. ...-.++++. ++.+++.|+.++ .+.+||+.+.+-
T Consensus 208 --v~~wd~~~~-~~~~-~~~~h---~~~v~~v~~~p~~~~l~s~s~d~---------~v~iwd~~~~~~ 260 (340)
T 1got_B 208 --AKLWDVREG-MCRQ-TFTGH---ESDINAICFFPNGNAFATGSDDA---------TCRLFDLRADQE 260 (340)
T ss_dssp --EEEEETTTC-SEEE-EECCC---SSCEEEEEECTTSSEEEEEETTS---------CEEEEETTTTEE
T ss_pred --EEEEECCCC-eeEE-EEcCC---cCCEEEEEEcCCCCEEEEEcCCC---------cEEEEECCCCcE
Confidence 233333222 1111 11111 1111223333 567778887543 388899887753
No 98
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=89.06 E-value=19 Score=38.56 Aligned_cols=96 Identities=7% Similarity=-0.013 Sum_probs=48.4
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCc
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~ 229 (998)
.+|.+|..+.+++.+........| ..++.- ++++|+.+..+ ....+++||+.+. ++..+.... .....
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~~p---~~~a~spdg~l~~~~~~~----~~~~v~~~~~~~g--~~~~~~~~~--~~~~~ 87 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQNP---TYLALSAKDCLYSVDKED----DEGGIAAWQIDGQ--TAHKLNTVV--APGTP 87 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCC---CCEEECTTCEEEEEEEET----TEEEEEEEEEETT--EEEEEEEEE--EESCC
T ss_pred EEEEEcCCCCeEEEeeeeeccCCc---ceEEEccCCeEEEEEecC----CCceEEEEEecCC--cEEEeeeee--cCCCC
Confidence 578888888888775432111111 123332 45766665321 1357999999664 355444210 01111
Q ss_pred ccEEEEECCc-EEEEEcCCCCCCCcccEEEEECC
Q 001901 230 GHVMALVGQR-YLMAIGGNDGKRPLADVWALDTA 262 (998)
Q Consensus 230 ~hs~~~~~~~-~Lyv~GG~~g~~~lndv~~yD~~ 262 (998)
-..+++-.++ .||+.+..+ ..+..||+.
T Consensus 88 p~~~a~spdg~~l~~~~~~~-----~~v~v~~~~ 116 (347)
T 3hfq_A 88 PAYVAVDEARQLVYSANYHK-----GTAEVMKIA 116 (347)
T ss_dssp CSEEEEETTTTEEEEEETTT-----TEEEEEEEC
T ss_pred CEEEEECCCCCEEEEEeCCC-----CEEEEEEeC
Confidence 2233344333 566655322 357777774
No 99
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=88.94 E-value=21 Score=38.09 Aligned_cols=134 Identities=15% Similarity=0.168 Sum_probs=63.4
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
+.+.+||+.+.+|..+..... ....-.+++.. ++.+++.|+.+ ..+.+||+.+. ++....... ....
T Consensus 30 ~~v~i~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~~~~~d------g~i~vwd~~~~--~~~~~~~~~--~~~~ 97 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHELKE--HNGQVTGVDWAPDSNRIVTCGTD------RNAYVWTLKGR--TWKPTLVIL--RINR 97 (372)
T ss_dssp SEEEEEEEETTEEEEEEEEEC--CSSCEEEEEEETTTTEEEEEETT------SCEEEEEEETT--EEEEEEECC--CCSS
T ss_pred CEEEEEeCCCCcEEeeeeecC--CCCcccEEEEeCCCCEEEEEcCC------CeEEEEECCCC--eeeeeEEee--cCCC
Confidence 378889999887665544310 11111223333 34556666542 46889998775 354443211 1122
Q ss_pred cccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCC
Q 001901 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (998)
Q Consensus 229 ~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~ 302 (998)
.-.++....++.+++.|+.++ .+..||+.+....+........ ............++.+++.|+.++
T Consensus 98 ~v~~~~~~~~~~~l~~~~~d~-----~v~i~d~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg 164 (372)
T 1k8k_C 98 AARCVRWAPNEKKFAVGSGSR-----VISICYFEQENDWWVCKHIKKP--IRSTVLSLDWHPNSVLLAAGSCDF 164 (372)
T ss_dssp CEEEEEECTTSSEEEEEETTS-----SEEEEEEETTTTEEEEEEECTT--CCSCEEEEEECTTSSEEEEEETTS
T ss_pred ceeEEEECCCCCEEEEEeCCC-----EEEEEEecCCCcceeeeeeecc--cCCCeeEEEEcCCCCEEEEEcCCC
Confidence 222333334446777777654 4555565544212222211110 011112222333667777777543
No 100
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=88.77 E-value=25 Score=36.77 Aligned_cols=181 Identities=12% Similarity=0.109 Sum_probs=84.9
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCc
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~ 229 (998)
.+.++|..+.+....-.. ....-.+++.. ++.+++.|+.+ ..+.+||+.+.. .-..+. +. ...
T Consensus 46 ~i~iw~~~~~~~~~~~~~----h~~~v~~~~~~~~~~~l~s~~~d------~~i~vwd~~~~~-~~~~~~--~~---~~~ 109 (312)
T 4ery_A 46 LIKIWGAYDGKFEKTISG----HKLGISDVAWSSDSNLLVSASDD------KTLKIWDVSSGK-CLKTLK--GH---SNY 109 (312)
T ss_dssp CEEEEETTTCCEEEEECC----CSSCEEEEEECTTSSEEEEEETT------SEEEEEETTTCC-EEEEEE--CC---SSC
T ss_pred eEEEEeCCCcccchhhcc----CCCceEEEEEcCCCCEEEEECCC------CEEEEEECCCCc-EEEEEc--CC---CCC
Confidence 567788877776544321 01111222222 34666667642 468999998753 111121 11 111
Q ss_pred ccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCccc
Q 001901 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLAS 309 (998)
Q Consensus 230 ~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~d 309 (998)
-.++....++.+++.|+.++ .+..||+.+. +-...-.... ..........++.+++.|+.++.
T Consensus 110 v~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~--~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~d~~------ 172 (312)
T 4ery_A 110 VFCCNFNPQSNLIVSGSFDE-----SVRIWDVKTG--KCLKTLPAHS----DPVSAVHFNRDGSLIVSSSYDGL------ 172 (312)
T ss_dssp EEEEEECSSSSEEEEEETTS-----CEEEEETTTC--CEEEEECCCS----SCEEEEEECTTSSEEEEEETTSC------
T ss_pred EEEEEEcCCCCEEEEEeCCC-----cEEEEECCCC--EEEEEecCCC----CcEEEEEEcCCCCEEEEEeCCCc------
Confidence 12223333445777777665 5788999876 3222111111 01111222336677777775432
Q ss_pred EEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEE
Q 001901 310 AYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (998)
Q Consensus 310 v~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~ 376 (998)
+..|+.... .......... .......+..-++..++.|+.+ ..+.+||..+.+-.
T Consensus 173 i~~wd~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~d---------~~i~iwd~~~~~~~ 227 (312)
T 4ery_A 173 CRIWDTASG-QCLKTLIDDD--NPPVSFVKFSPNGKYILAATLD---------NTLKLWDYSKGKCL 227 (312)
T ss_dssp EEEEETTTC-CEEEEECCSS--CCCEEEEEECTTSSEEEEEETT---------TEEEEEETTTTEEE
T ss_pred EEEEECCCC-ceeeEEeccC--CCceEEEEECCCCCEEEEEcCC---------CeEEEEECCCCcEE
Confidence 334443332 2111111111 1111111122245666777643 35889999887643
No 101
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=88.69 E-value=8.5 Score=47.03 Aligned_cols=95 Identities=9% Similarity=0.125 Sum_probs=52.7
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe--C--CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCC
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--G--TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~--~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~ 226 (998)
.+.+||+.+..+..+.... .....-..+.+ . +..++.|+.+ ..+.+||+.+. +|..+... ..
T Consensus 32 ~I~vwd~~~~~~~~~~~l~---~h~~~V~~l~~s~~~~~~~l~s~s~D------g~I~vwd~~~~--~~~~~~~~---~~ 97 (753)
T 3jro_A 32 TIKIFEVEGETHKLIDTLT---GHEGPVWRVDWAHPKFGTILASCSYD------GKVLIWKEENG--RWSQIAVH---AV 97 (753)
T ss_dssp EEEEEEEETTEEEEEEEEC---CCSSCEEEEEECCTTSCSEEEEEETT------SCEEEEEEETT--EEEEEEEE---CC
T ss_pred cEEEEecCCCCCccceecc---CCcCceEEEEecCCCCCCEEEEEeCC------CeEEEEECCCC--cccccccc---cC
Confidence 6778888877777665431 11112222222 2 4566666642 46889998875 46655522 22
Q ss_pred CCcccEEEEE-CC--cEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 227 PRYGHVMALV-GQ--RYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 227 ~R~~hs~~~~-~~--~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
....-..+.+ .+ +.+++.|+.++ .+..||+.+.
T Consensus 98 h~~~V~~v~~sp~~~~~~l~sgs~dg-----~I~vwdl~~~ 133 (753)
T 3jro_A 98 HSASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEFKEN 133 (753)
T ss_dssp CSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEECCSS
T ss_pred CCCCeEEEEECCCCCCCEEEEEeCCC-----cEEEEEeecC
Confidence 2222223333 32 35788887665 5777887655
No 102
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=87.95 E-value=0.21 Score=55.57 Aligned_cols=69 Identities=9% Similarity=0.042 Sum_probs=39.9
Q ss_pred CCeEEEecCCCCHHH-------HHHHHHHcCCCCCCCCccceeEEEeccccCCCCChH------HHHHHHHHhh-hcCCC
Q 001901 698 APIKIFGDLHGQFGD-------LMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSL------ETITLLLALK-VEYPN 763 (998)
Q Consensus 698 ~~i~vvGDiHG~~~d-------L~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~------evl~ll~~lk-~~~p~ 763 (998)
-+++++||.|.-... |.++.+.. ..+ -+|++||+++.|..+. +.+..++... ....-
T Consensus 4 l~f~~igD~g~g~~~q~~va~~m~~~~~~~---~pd------~vl~~GD~~y~G~~~~~d~~~~~~f~~~~~~~~~~~~~ 74 (342)
T 3tgh_A 4 LRFASLGDWGKDTKGQILNAKYFKQFIKNE---RVT------FIVSPGSNFIDGVKGLNDPAWKNLYEDVYSEEKGDMYM 74 (342)
T ss_dssp EEEEECCSCBSCCHHHHHHHHHHHHHHHHT---TCC------EEEECSCSBTTCCCSTTCTHHHHHTTTTSCCGGGTTCS
T ss_pred EEEEEEecCCCCCchHHHHHHHHHHHHhhc---CCC------EEEECCCcccCCCCcCccHHHHHHHHHHhhhhhhhhCC
Confidence 368999999975432 22223321 112 5889999998887432 2222222210 12223
Q ss_pred cEEEeecCcccc
Q 001901 764 NVHLIRGNHEAA 775 (998)
Q Consensus 764 ~v~llrGNHE~~ 775 (998)
-++.+.||||..
T Consensus 75 P~~~vlGNHD~~ 86 (342)
T 3tgh_A 75 PFFTVLGTRDWT 86 (342)
T ss_dssp EEEECCCHHHHT
T ss_pred CEEEeCCCCccC
Confidence 479999999975
No 103
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=87.40 E-value=12 Score=45.21 Aligned_cols=104 Identities=13% Similarity=0.134 Sum_probs=54.0
Q ss_pred CCcEEEEECCCCcEEEecCCCCCC---------------CCc----c-ceEEEEe-CCEEEEEeCCCCCCCCcccEEEEE
Q 001901 149 TADVHCYDVLTNKWSRITPFGEPP---------------TPR----A-AHVATAV-GTMVVIQGGIGPAGLSAEDLHVLD 207 (998)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P---------------~pR----~-~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~D 207 (998)
...++++|+.+.+...+....... ..| . -.+.+.- +++.++++.. ..++++|
T Consensus 63 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~-------~~i~~~d 135 (741)
T 2ecf_A 63 QLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG-------GELYLYD 135 (741)
T ss_dssp EEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEET-------TEEEEEE
T ss_pred ccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeC-------CcEEEEE
Confidence 458999999999887765421101 000 0 1122222 3444444442 6799999
Q ss_pred cCCC---CCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccC
Q 001901 208 LTQQ---RPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPE 274 (998)
Q Consensus 208 l~t~---t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~ 274 (998)
+.+. . -..+. .....-...+.-.+++.++++.. +.++.+|+.+. +...+...
T Consensus 136 ~~~~~~~~--~~~l~-----~~~~~~~~~~~SPDG~~la~~~~------~~i~~~d~~~g--~~~~~~~~ 190 (741)
T 2ecf_A 136 LKQEGKAA--VRQLT-----HGEGFATDAKLSPKGGFVSFIRG------RNLWVIDLASG--RQMQLTAD 190 (741)
T ss_dssp SSSCSTTS--CCBCC-----CSSSCEEEEEECTTSSEEEEEET------TEEEEEETTTT--EEEECCCC
T ss_pred CCCCCcce--EEEcc-----cCCcccccccCCCCCCEEEEEeC------CcEEEEecCCC--CEEEeccC
Confidence 9875 2 22221 11111222333334444555432 37999999888 77766543
No 104
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=87.27 E-value=42 Score=39.94 Aligned_cols=114 Identities=11% Similarity=-0.018 Sum_probs=56.0
Q ss_pred cccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCC
Q 001901 253 LADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPS 332 (998)
Q Consensus 253 lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~ 332 (998)
...++++|+.+. +-..+..... ............+++.++++..+... ....++.++..+...+........ ..
T Consensus 234 ~~~l~~~d~~~~--~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~~-~~~~v~~~d~~~g~~~~~~~~~~~-~~ 307 (706)
T 2z3z_A 234 HVTVGIYHLATG--KTVYLQTGEP--KEKFLTNLSWSPDENILYVAEVNRAQ-NECKVNAYDAETGRFVRTLFVETD-KH 307 (706)
T ss_dssp EEEEEEEETTTT--EEEECCCCSC--TTCEEEEEEECTTSSEEEEEEECTTS-CEEEEEEEETTTCCEEEEEEEEEC-SS
T ss_pred eeEEEEEECCCC--ceEeeccCCC--CceeEeeEEEECCCCEEEEEEeCCCC-CeeEEEEEECCCCceeeEEEEccC-CC
Confidence 357999999887 5555432111 11111222333466655555443322 345677776654323333221111 00
Q ss_pred Cc-ceeEEEEE---CCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcc
Q 001901 333 PR-YQHAAVFV---NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTK 379 (998)
Q Consensus 333 pR-~~hsav~~---~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~ 379 (998)
.. ....+++. ++++++.+..++ ...+|.+|........+.
T Consensus 308 ~~~~~~~~~~sp~~dg~~l~~~~~~g-------~~~l~~~~~~~~~~~~l~ 351 (706)
T 2z3z_A 308 YVEPLHPLTFLPGSNNQFIWQSRRDG-------WNHLYLYDTTGRLIRQVT 351 (706)
T ss_dssp CCCCCSCCEECTTCSSEEEEEECTTS-------SCEEEEEETTSCEEEECC
T ss_pred eECccCCceeecCCCCEEEEEEccCC-------ccEEEEEECCCCEEEecC
Confidence 00 01122332 677666664432 356999998777776664
No 105
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=87.26 E-value=25 Score=37.30 Aligned_cols=191 Identities=8% Similarity=-0.005 Sum_probs=85.5
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCc
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~ 229 (998)
.+.+||+.+.+-...-.. .. ..-.+++.. ++..++.|+. ...+.+||+.+.. ...... ....
T Consensus 55 ~i~vwd~~~~~~~~~~~~---h~-~~v~~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~--~~~~~~-----~~~~ 117 (369)
T 3zwl_B 55 SASVWYSLNGERLGTLDG---HT-GTIWSIDVDCFTKYCVTGSA------DYSIKLWDVSNGQ--CVATWK-----SPVP 117 (369)
T ss_dssp CEEEEETTTCCEEEEECC---CS-SCEEEEEECTTSSEEEEEET------TTEEEEEETTTCC--EEEEEE-----CSSC
T ss_pred EEEEEeCCCchhhhhhhh---cC-CcEEEEEEcCCCCEEEEEeC------CCeEEEEECCCCc--EEEEee-----cCCC
Confidence 678889887654433211 01 111222222 3455666654 2469999998763 222221 1112
Q ss_pred ccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCC--ceEEEcccCCC-----CCCCccceEEEEEeCCEEEEEeccCC
Q 001901 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKP--YEWRKLEPEGE-----GPPPCMYATASARSDGLLLLCGGRDA 302 (998)
Q Consensus 230 ~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~--~~W~~v~~~~~-----~P~~r~~~~a~~~~~~~lyvfGG~~~ 302 (998)
-.++....++..++.++.+.......+..||+.+.. ..+........ ..........+...++.+++.|+.++
T Consensus 118 v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 197 (369)
T 3zwl_B 118 VKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDG 197 (369)
T ss_dssp EEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTS
T ss_pred eEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCC
Confidence 223334444456666655422223466777765442 12222211100 00000112222234566677776542
Q ss_pred CCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCeEEE
Q 001901 303 SSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (998)
Q Consensus 303 ~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~ 377 (998)
.+..|+............. ....-.++++. ++.+++.|+.+ ..+.+||..+.+...
T Consensus 198 ------~i~i~d~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~d---------~~i~v~d~~~~~~~~ 254 (369)
T 3zwl_B 198 ------KISKYDVSNNYEYVDSIDL----HEKSISDMQFSPDLTYFITSSRD---------TNSFLVDVSTLQVLK 254 (369)
T ss_dssp ------EEEEEETTTTTEEEEEEEC----CSSCEEEEEECTTSSEEEEEETT---------SEEEEEETTTCCEEE
T ss_pred ------EEEEEECCCCcEeEEEEec----CCCceeEEEECCCCCEEEEecCC---------ceEEEEECCCCceee
Confidence 3455555442222211111 11112223333 56666777642 358899998876543
No 106
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=86.92 E-value=15 Score=38.93 Aligned_cols=53 Identities=13% Similarity=0.109 Sum_probs=31.9
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQ 211 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~ 211 (998)
+.++++|+.+.+....-..+ .....+.++.. ++.+|+.+.. ...+++||+.+.
T Consensus 21 ~~v~~~d~~~~~~~~~~~~~---~~~~~~~~~~s~dg~~~~v~~~~------~~~i~~~d~~t~ 75 (349)
T 1jmx_B 21 NNLHVVDVASDTVYKSCVMP---DKFGPGTAMMAPDNRTAYVLNNH------YGDIYGIDLDTC 75 (349)
T ss_dssp TEEEEEETTTTEEEEEEECS---SCCSSCEEEECTTSSEEEEEETT------TTEEEEEETTTT
T ss_pred CeEEEEECCCCcEEEEEecC---CCCCCceeEECCCCCEEEEEeCC------CCcEEEEeCCCC
Confidence 47899999998765443332 10012334443 3367777642 256999999875
No 107
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=86.57 E-value=33 Score=37.10 Aligned_cols=102 Identities=10% Similarity=0.164 Sum_probs=50.9
Q ss_pred cEEEEECCCCc------EEEecCCCCCCCCccceEEEEe-----CCEE-EEEeCCCCCCCCcccEEEEEcCC------CC
Q 001901 151 DVHCYDVLTNK------WSRITPFGEPPTPRAAHVATAV-----GTMV-VIQGGIGPAGLSAEDLHVLDLTQ------QR 212 (998)
Q Consensus 151 dv~~yD~~t~~------W~~l~~~g~~P~pR~~hsa~~~-----~~~l-yVfGG~~~~~~~~~dv~~~Dl~t------~t 212 (998)
.+.+||+.+.. +..+...........-.+++.. ++.. ++.|+.+ ..+.+||+.+ ..
T Consensus 92 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~ 165 (397)
T 1sq9_A 92 DLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK------GTTYIWKFHPFADESNSL 165 (397)
T ss_dssp CEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT------SCEEEEEEESSSSHHHHT
T ss_pred CEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC------CcEEEEeCCccccccccc
Confidence 67788887766 7776543100000122233333 2344 6666642 4688888876 21
Q ss_pred -CceE---Eeee--cCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 213 -PRWH---RVVV--QGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 213 -~~W~---~l~~--~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
..|. .+.. .........-.++....++ +++.|+.++ .+..||+.+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg-----~i~i~d~~~~ 217 (397)
T 1sq9_A 166 TLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNG-----TVQISELSTL 217 (397)
T ss_dssp TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTS-----EEEEEETTTT
T ss_pred eeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCC-----cEEEEECCCC
Confidence 1222 1110 0001112223445555565 777777654 6888999877
No 108
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=86.35 E-value=7.2 Score=42.66 Aligned_cols=190 Identities=13% Similarity=0.036 Sum_probs=86.1
Q ss_pred CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEE--CCcEEEEEcCCCCCCCcccEEEEEC
Q 001901 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV--GQRYLMAIGGNDGKRPLADVWALDT 261 (998)
Q Consensus 184 ~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~--~~~~Lyv~GG~~g~~~lndv~~yD~ 261 (998)
++..++.|+.+ ..+.+||+.+.. .+.. +......-.++.+ .+..+++.|+.++ .+..||+
T Consensus 138 dg~~l~sgs~d------~~i~iwd~~~~~----~~~~---~~~h~~~V~~~~~~~~~~~~l~s~s~D~-----~v~iwd~ 199 (344)
T 4gqb_B 138 SGTQAVSGSKD------ICIKVWDLAQQV----VLSS---YRAHAAQVTCVAASPHKDSVFLSCSEDN-----RILLWDT 199 (344)
T ss_dssp TSSEEEEEETT------SCEEEEETTTTE----EEEE---ECCCSSCEEEEEECSSCTTEEEEEETTS-----CEEEEET
T ss_pred CCCEEEEEeCC------CeEEEEECCCCc----EEEE---EcCcCCceEEEEecCCCCCceeeecccc-----ccccccc
Confidence 34666667642 458999998752 2221 1111111122222 2225777787765 5778898
Q ss_pred CCCCceEEEcccCCCCCCCccceEEEEE--eCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEE
Q 001901 262 AAKPYEWRKLEPEGEGPPPCMYATASAR--SDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAA 339 (998)
Q Consensus 262 ~s~~~~W~~v~~~~~~P~~r~~~~a~~~--~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsa 339 (998)
.+... -..+..... .....++.. .++.+++.|+.++. +..++......-... .+. ...-.++
T Consensus 200 ~~~~~-~~~~~~~~~----~~~~~~~~~~p~~~~~l~sg~~dg~------v~~wd~~~~~~~~~~--~~h---~~~v~~v 263 (344)
T 4gqb_B 200 RCPKP-ASQIGCSAP----GYLPTSLAWHPQQSEVFVFGDENGT------VSLVDTKSTSCVLSS--AVH---SQCVTGL 263 (344)
T ss_dssp TSSSC-EEECC--------CCCEEEEEECSSCTTEEEEEETTSE------EEEEESCC--CCEEE--ECC---SSCEEEE
T ss_pred cccce-eeeeeccee----eccceeeeecCCCCcceEEeccCCc------EEEEECCCCcEEEEE--cCC---CCCEEEE
Confidence 77621 112211110 111222222 25677888875432 333333222100000 110 1111223
Q ss_pred EEE-C-CEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCCcceeEEEEE--C
Q 001901 340 VFV-N-ARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAV--G 415 (998)
Q Consensus 340 v~~-~-~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~--~ 415 (998)
++. + .++++.|+.++ .|.+||..+.+-.++... . ... .+++.. +
T Consensus 264 ~fsp~g~~~lasgs~D~---------~i~vwd~~~~~~~~~~~H--~--------------------~~V-~~v~~sp~~ 311 (344)
T 4gqb_B 264 VFSPHSVPFLASLSEDC---------SLAVLDSSLSELFRSQAH--R--------------------DFV-RDATWSPLN 311 (344)
T ss_dssp EECSSSSCCEEEEETTS---------CEEEECTTCCEEEEECCC--S--------------------SCE-EEEEECSSS
T ss_pred EEccCCCeEEEEEeCCC---------eEEEEECCCCcEEEEcCC--C--------------------CCE-EEEEEeCCC
Confidence 333 2 35777777543 388899988764433211 0 111 122222 4
Q ss_pred CEEEEEcCCCCCCCcccEEEecccccc
Q 001901 416 DLIFIYGGLRGGVLLDDLLVAEDLAAA 442 (998)
Q Consensus 416 ~~LyVfGG~~~~~~l~Dv~~ld~~~~~ 442 (998)
..|++-||.++... +|.++...++
T Consensus 312 ~~llas~s~D~~v~---~w~v~~~~~~ 335 (344)
T 4gqb_B 312 HSLLTTVGWDHQVV---HHVVPTEPLP 335 (344)
T ss_dssp TTEEEEEETTSCEE---EEECCC----
T ss_pred CeEEEEEcCCCeEE---EEECCCCCCC
Confidence 46888888876653 5666655544
No 109
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=86.21 E-value=25 Score=38.18 Aligned_cols=183 Identities=11% Similarity=-0.015 Sum_probs=84.4
Q ss_pred cCCcEEEEECCCCcEEEecCCCCCCC-----------CccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceE
Q 001901 148 ATADVHCYDVLTNKWSRITPFGEPPT-----------PRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWH 216 (998)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~-----------pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~ 216 (998)
....+.+||+.+.+....-.....+. ...-.+++...+..++.|+. ...+++||+.+.....
T Consensus 169 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~i~~~d~~~~~~~~- 241 (425)
T 1r5m_A 169 VENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGP------KGAIFVYQITEKTPTG- 241 (425)
T ss_dssp TTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECG------GGCEEEEETTCSSCSE-
T ss_pred cCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcC------CCeEEEEEcCCCceee-
Confidence 34578889988776544332211110 00022233333334555654 2579999998753112
Q ss_pred EeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEE
Q 001901 217 RVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLL 296 (998)
Q Consensus 217 ~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyv 296 (998)
.+. .....-.+++...++.+++.|+.++ .+..||+.+........... ..........++ +++
T Consensus 242 ~~~-----~~~~~i~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~~~~------~~i~~~~~~~~~-~l~ 304 (425)
T 1r5m_A 242 KLI-----GHHGPISVLEFNDTNKLLLSASDDG-----TLRIWHGGNGNSQNCFYGHS------QSIVSASWVGDD-KVI 304 (425)
T ss_dssp EEC-----CCSSCEEEEEEETTTTEEEEEETTS-----CEEEECSSSBSCSEEECCCS------SCEEEEEEETTT-EEE
T ss_pred eec-----cCCCceEEEEECCCCCEEEEEcCCC-----EEEEEECCCCccceEecCCC------ccEEEEEECCCC-EEE
Confidence 121 1111223344444445777777554 57888887653222221110 112222333455 666
Q ss_pred EeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCe
Q 001901 297 CGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (998)
Q Consensus 297 fGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~ 374 (998)
.|+.++ .+..|+.... .-...... ....-.++++. ++.+++.|+.+ ..+.+||..+.+
T Consensus 305 ~~~~d~------~i~i~d~~~~-~~~~~~~~----~~~~i~~~~~s~~~~~l~~~~~d---------g~i~i~~~~~~~ 363 (425)
T 1r5m_A 305 SCSMDG------SVRLWSLKQN-TLLALSIV----DGVPIFAGRISQDGQKYAVAFMD---------GQVNVYDLKKLN 363 (425)
T ss_dssp EEETTS------EEEEEETTTT-EEEEEEEC----TTCCEEEEEECTTSSEEEEEETT---------SCEEEEECHHHH
T ss_pred EEeCCC------cEEEEECCCC-cEeEeccc----CCccEEEEEEcCCCCEEEEEECC---------CeEEEEECCCCc
Confidence 666442 3444444332 21111111 01111222332 46677777643 248888887654
No 110
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=85.84 E-value=40 Score=35.90 Aligned_cols=148 Identities=14% Similarity=0.175 Sum_probs=74.1
Q ss_pred EEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCC
Q 001901 186 MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKP 265 (998)
Q Consensus 186 ~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~ 265 (998)
.+++.|+. ...+.+||+.+.. .-..+. .+ + ..-.+++...++..++.|+.++ .+..||+.+..
T Consensus 93 ~~l~s~s~------D~~i~lWd~~~~~-~~~~~~-~~--~--~~~~~~~~spdg~~l~~g~~dg-----~v~i~~~~~~~ 155 (321)
T 3ow8_A 93 PIAASSSL------DAHIRLWDLENGK-QIKSID-AG--P--VDAWTLAFSPDSQYLATGTHVG-----KVNIFGVESGK 155 (321)
T ss_dssp SEEEEEET------TSEEEEEETTTTE-EEEEEE-CC--T--TCCCCEEECTTSSEEEEECTTS-----EEEEEETTTCS
T ss_pred CEEEEEeC------CCcEEEEECCCCC-EEEEEe-CC--C--ccEEEEEECCCCCEEEEEcCCC-----cEEEEEcCCCc
Confidence 56666664 2568899998753 112221 11 1 1122344444556777777654 57788887763
Q ss_pred ceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CC
Q 001901 266 YEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NA 344 (998)
Q Consensus 266 ~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~ 344 (998)
..+...... ......+...++++++.|+.++. +..++.... +-.. ...+. . ..-.++++. ++
T Consensus 156 ~~~~~~~~~------~~v~~~~~spdg~~lasg~~dg~------i~iwd~~~~-~~~~-~~~~h--~-~~v~~l~~spd~ 218 (321)
T 3ow8_A 156 KEYSLDTRG------KFILSIAYSPDGKYLASGAIDGI------INIFDIATG-KLLH-TLEGH--A-MPIRSLTFSPDS 218 (321)
T ss_dssp EEEEEECSS------SCEEEEEECTTSSEEEEEETTSC------EEEEETTTT-EEEE-EECCC--S-SCCCEEEECTTS
T ss_pred eeEEecCCC------ceEEEEEECCCCCEEEEEcCCCe------EEEEECCCC-cEEE-EEccc--C-CceeEEEEcCCC
Confidence 333322111 11222233346778888876532 344444333 2111 11111 0 011123332 56
Q ss_pred EEEEEcccCCCCCccccCCeEEEEECCCCeEE
Q 001901 345 RLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (998)
Q Consensus 345 ~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~ 376 (998)
.+++.|+.++ .+.+||..+.+..
T Consensus 219 ~~l~s~s~dg---------~i~iwd~~~~~~~ 241 (321)
T 3ow8_A 219 QLLVTASDDG---------YIKIYDVQHANLA 241 (321)
T ss_dssp CEEEEECTTS---------CEEEEETTTCCEE
T ss_pred CEEEEEcCCC---------eEEEEECCCccee
Confidence 7888887543 3888998877643
No 111
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=85.81 E-value=32 Score=41.04 Aligned_cols=160 Identities=12% Similarity=0.027 Sum_probs=74.5
Q ss_pred cccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCC
Q 001901 200 AEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPP 279 (998)
Q Consensus 200 ~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~ 279 (998)
...++++|+.+.. -..+.. + .....+-..++...+++.++++..+.......++.+|+.+.. .+..+........
T Consensus 234 ~~~l~~~d~~~~~--~~~~~~-~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~-~~~~~~~~~~~~~ 308 (706)
T 2z3z_A 234 HVTVGIYHLATGK--TVYLQT-G-EPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR-FVRTLFVETDKHY 308 (706)
T ss_dssp EEEEEEEETTTTE--EEECCC-C-SCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC-EEEEEEEEECSSC
T ss_pred eeEEEEEECCCCc--eEeecc-C-CCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc-eeeEEEEccCCCe
Confidence 4679999998752 333321 1 111122223333344454555444443445689999997751 3333321111000
Q ss_pred CccceEEEEEe--CCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeE-EEEE-CC-EEEEEcccCC
Q 001901 280 PCMYATASARS--DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHA-AVFV-NA-RLHVSGGALG 354 (998)
Q Consensus 280 ~r~~~~a~~~~--~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hs-av~~-~~-~L~V~GG~~~ 354 (998)
........... ++++++.+..++ ...+|.++.... ....+... ...... .++. ++ .|++.+..++
T Consensus 309 ~~~~~~~~~sp~~dg~~l~~~~~~g----~~~l~~~~~~~~---~~~~l~~~---~~~v~~~~~~spdg~~l~~~~~~~~ 378 (706)
T 2z3z_A 309 VEPLHPLTFLPGSNNQFIWQSRRDG----WNHLYLYDTTGR---LIRQVTKG---EWEVTNFAGFDPKGTRLYFESTEAS 378 (706)
T ss_dssp CCCCSCCEECTTCSSEEEEEECTTS----SCEEEEEETTSC---EEEECCCS---SSCEEEEEEECTTSSEEEEEESSSC
T ss_pred ECccCCceeecCCCCEEEEEEccCC----ccEEEEEECCCC---EEEecCCC---CeEEEeeeEEcCCCCEEEEEecCCC
Confidence 00011223334 777666665442 356777764332 22333221 111112 2222 34 5655554322
Q ss_pred CCCccccCCeEEEEECCCCeEEEcc
Q 001901 355 GGRMVEDSSSVAVLDTAAGVWCDTK 379 (998)
Q Consensus 355 ~~~~~~~~~dv~vyD~~t~~W~~v~ 379 (998)
.. ...+|.+|..+.+...+.
T Consensus 379 ~~-----~~~l~~~d~~~~~~~~l~ 398 (706)
T 2z3z_A 379 PL-----ERHFYCIDIKGGKTKDLT 398 (706)
T ss_dssp TT-----CBEEEEEETTCCCCEESC
T ss_pred Cc-----eEEEEEEEcCCCCceecc
Confidence 11 356999999888766554
No 112
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=85.76 E-value=62 Score=38.04 Aligned_cols=82 Identities=11% Similarity=0.025 Sum_probs=45.8
Q ss_pred CEEEEEeCCC---------CCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEE----CCc--EEEEEcCCCC
Q 001901 185 TMVVIQGGIG---------PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV----GQR--YLMAIGGNDG 249 (998)
Q Consensus 185 ~~lyVfGG~~---------~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~----~~~--~Lyv~GG~~g 249 (998)
+.||+..|.. ....+...++.+|..+....|+.-....+...-+...+.+++ +++ ++++++..++
T Consensus 247 g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G 326 (571)
T 2ad6_A 247 NLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNG 326 (571)
T ss_dssp TEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTS
T ss_pred CeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCc
Confidence 5777765531 122234579999999877789865422111111111122222 232 3666665543
Q ss_pred CCCcccEEEEECCCCCceEEEc
Q 001901 250 KRPLADVWALDTAAKPYEWRKL 271 (998)
Q Consensus 250 ~~~lndv~~yD~~s~~~~W~~v 271 (998)
.++++|..+....|..-
T Consensus 327 -----~l~~lD~~tG~~~w~~~ 343 (571)
T 2ad6_A 327 -----ILYTLNRENGNLIVAEK 343 (571)
T ss_dssp -----EEEEEETTTCCEEEEEE
T ss_pred -----EEEEEECCCCCEEeeec
Confidence 68899998887778753
No 113
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=85.53 E-value=18 Score=36.84 Aligned_cols=197 Identities=7% Similarity=-0.099 Sum_probs=94.5
Q ss_pred cEEEEECCC-CcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 151 DVHCYDVLT-NKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 151 dv~~yD~~t-~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
.++++|+.+ .+...+... +....-..++.. +++.+++++.... ....+|.++..+.. ...+. ... .
T Consensus 63 ~i~~~d~~~~~~~~~~~~~---~~~~~~~~~~~spdg~~l~~~~~~~~--~~~~l~~~~~~~~~--~~~~~---~~~--~ 130 (297)
T 2ojh_A 63 LLYRLSLAGDPSPEKVDTG---FATICNNDHGISPDGALYAISDKVEF--GKSAIYLLPSTGGT--PRLMT---KNL--P 130 (297)
T ss_dssp EEEEEESSSCCSCEECCCT---TCCCBCSCCEECTTSSEEEEEECTTT--SSCEEEEEETTCCC--CEECC---SSS--S
T ss_pred eEEEEeCCCCCCceEeccc---cccccccceEECCCCCEEEEEEeCCC--CcceEEEEECCCCc--eEEee---cCC--C
Confidence 789999998 777766533 111111222222 4455555543222 23578889887653 33332 111 1
Q ss_pred cccEEEEECCc-EEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEec-cCCCCCC
Q 001901 229 YGHVMALVGQR-YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGG-RDASSVP 306 (998)
Q Consensus 229 ~~hs~~~~~~~-~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG-~~~~~~~ 306 (998)
...+....++ .|++.++.++. ..+|.+|+.+. ....+..... .........+++.+++++ .++
T Consensus 131 -~~~~~~spdg~~l~~~~~~~~~---~~l~~~~~~~~--~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~~~~---- 195 (297)
T 2ojh_A 131 -SYWHGWSPDGKSFTYCGIRDQV---FDIYSMDIDSG--VETRLTHGEG-----RNDGPDYSPDGRWIYFNSSRTG---- 195 (297)
T ss_dssp -EEEEEECTTSSEEEEEEEETTE---EEEEEEETTTC--CEEECCCSSS-----CEEEEEECTTSSEEEEEECTTS----
T ss_pred -ccceEECCCCCEEEEEECCCCc---eEEEEEECCCC--cceEcccCCC-----ccccceECCCCCEEEEEecCCC----
Confidence 2223333233 45545554432 37888888776 5555543221 112223334555444443 232
Q ss_pred cccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCcc--ccCCeEEEEECCCCeEEEccc
Q 001901 307 LASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMV--EDSSSVAVLDTAAGVWCDTKS 380 (998)
Q Consensus 307 ~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~--~~~~dv~vyD~~t~~W~~v~~ 380 (998)
...+|.++.... ........ ......+.+. +++.+++++..+..... .....++++|+.+.+...+..
T Consensus 196 ~~~i~~~~~~~~---~~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 266 (297)
T 2ojh_A 196 QMQIWRVRVDGS---SVERITDS---AYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFD 266 (297)
T ss_dssp SCEEEEEETTSS---CEEECCCC---SEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEE
T ss_pred CccEEEECCCCC---CcEEEecC---CcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeec
Confidence 346777764433 22222221 1111222222 55555555543321100 012569999999988766554
No 114
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=85.51 E-value=30 Score=38.36 Aligned_cols=93 Identities=13% Similarity=0.146 Sum_probs=51.0
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~ 227 (998)
+.++++|..+++...+-... .....-.++.+ ++..++.|+.+ ..+.+||+.+.. .+.. +...
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~---~~~~~V~sv~fspdg~~lasgs~D------g~v~iWd~~~~~----~~~~---~~~h 188 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQME---QPGEYISSVAWIKEGNYLAVGTSS------AEVQLWDVQQQK----RLRN---MTSH 188 (420)
T ss_dssp TEEEEEETTTCCEEEEEECC---STTCCEEEEEECTTSSEEEEEETT------SCEEEEETTTTE----EEEE---ECCC
T ss_pred CEEEEEECCCCCEEEEEEec---CCCCcEEEEEECCCCCEEEEEECC------CeEEEEEcCCCc----EEEE---EeCC
Confidence 47999999998876654321 11111223333 34666667642 468999998752 2221 1111
Q ss_pred CcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 228 R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
.....+...++ .+++.|+.++ .++.+|....
T Consensus 189 ~~~v~~~s~~~-~~l~sgs~d~-----~i~~~d~~~~ 219 (420)
T 4gga_A 189 SARVGSLSWNS-YILSSGSRSG-----HIHHHDVRVA 219 (420)
T ss_dssp SSCEEEEEEET-TEEEEEETTS-----EEEEEETTSS
T ss_pred CCceEEEeeCC-CEEEEEeCCC-----ceeEeeeccc
Confidence 22223334444 5777777654 5667777654
No 115
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=85.47 E-value=42 Score=35.99 Aligned_cols=98 Identities=7% Similarity=0.075 Sum_probs=47.8
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCC-C
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG-P 227 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~-~ 227 (998)
.+|.+|..+.+++.+... ....|+ .++.. +..||+.+..+. ....+.+|++...+.+...+... +. .
T Consensus 30 ~~~~~d~~~g~~~~~~~~-~~~~p~---~l~~spdg~~l~~~~~~~~---~~~~v~~~~~~~~~g~~~~~~~~---~~~~ 99 (361)
T 3scy_A 30 YTFRFNEETGESLPLSDA-EVANPS---YLIPSADGKFVYSVNEFSK---DQAAVSAFAFDKEKGTLHLLNTQ---KTMG 99 (361)
T ss_dssp EEEEEETTTCCEEEEEEE-ECSCCC---SEEECTTSSEEEEEECCSS---TTCEEEEEEEETTTTEEEEEEEE---ECSS
T ss_pred EEEEEeCCCCCEEEeecc-cCCCCc---eEEECCCCCEEEEEEccCC---CCCcEEEEEEeCCCCcEEEeeEe---ccCC
Confidence 466778888888776543 112221 12222 336666654311 12456566555432245555421 11 1
Q ss_pred CcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 228 R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
..-+.++. .++.||+.+..+ ..+..|++.+.
T Consensus 100 ~~p~~~~~-dg~~l~~~~~~~-----~~v~~~~~~~~ 130 (361)
T 3scy_A 100 ADPCYLTT-NGKNIVTANYSG-----GSITVFPIGQD 130 (361)
T ss_dssp SCEEEEEE-CSSEEEEEETTT-----TEEEEEEBCTT
T ss_pred CCcEEEEE-CCCEEEEEECCC-----CEEEEEEeCCC
Confidence 12222333 555677665322 36778887643
No 116
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=85.46 E-value=51 Score=36.80 Aligned_cols=62 Identities=16% Similarity=0.042 Sum_probs=35.4
Q ss_pred cccEEEEECCcEEEEEcCCCC----CCCcccEEEEEC----CCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEec
Q 001901 229 YGHVMALVGQRYLMAIGGNDG----KRPLADVWALDT----AAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGG 299 (998)
Q Consensus 229 ~~hs~~~~~~~~Lyv~GG~~g----~~~lndv~~yD~----~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG 299 (998)
..|++++..++.+|.+|-... .....+...-.. ... +...+.. ...|+.++..++.+|.+|-
T Consensus 182 ~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~--~i~~va~-------G~~ht~~l~~~G~v~~wG~ 251 (406)
T 4d9s_A 182 AEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGE--KMSMVAC-------GWRHTISVSYSGALYTYGW 251 (406)
T ss_dssp SSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTC--CEEEEEE-------CSSEEEEEETTCCEEEEEC
T ss_pred CCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCc--eEEEEEE-------CCCcEEEEcCCCCEEEeeC
Confidence 468888888889999995421 111111111110 111 2333322 2467777788999999994
No 117
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=85.27 E-value=0.48 Score=55.88 Aligned_cols=67 Identities=13% Similarity=0.091 Sum_probs=42.3
Q ss_pred CCeEEEecCCCCHH----------------HHHHHHHHcCCCCCCCCccceeEEEeccccCCCCCh----------HHHH
Q 001901 698 APIKIFGDLHGQFG----------------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS----------LETI 751 (998)
Q Consensus 698 ~~i~vvGDiHG~~~----------------dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s----------~evl 751 (998)
..|+.++|+||++. .|..+++....... ..-+|+.||.++..+.+ ..++
T Consensus 20 l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~-----~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~~ 94 (527)
T 3qfk_A 20 IAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYD-----QSFKIDNGDFLQGSPFCNYLIAHSGSSQPLV 94 (527)
T ss_dssp EEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSS-----EEEEEECSCCSSSSHHHHHHHHTTCSSHHHH
T ss_pred EEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCC-----CEEEEECCCcCCCcHHHHHHhhcccCcchHH
Confidence 45889999999863 56666666532211 11345579999987543 3455
Q ss_pred HHHHHhhhcCCCcEEEeecCccc
Q 001901 752 TLLLALKVEYPNNVHLIRGNHEA 774 (998)
Q Consensus 752 ~ll~~lk~~~p~~v~llrGNHE~ 774 (998)
.+|-.+. --++..||||.
T Consensus 95 ~~ln~lg-----~D~~t~GNHef 112 (527)
T 3qfk_A 95 DFYNRMA-----FDFGTLGNHEF 112 (527)
T ss_dssp HHHHHTC-----CCEECCCGGGG
T ss_pred HHHHhcC-----CcEEecccccc
Confidence 5555553 22566899995
No 118
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=85.25 E-value=42 Score=35.69 Aligned_cols=179 Identities=15% Similarity=0.142 Sum_probs=87.9
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
..+.++|+.+.+-...-..+ +.. ..+++.. ++..++.|+. ...+.+||+.+....+. +. ....
T Consensus 102 ~~i~lWd~~~~~~~~~~~~~--~~~--~~~~~~spdg~~l~~g~~------dg~v~i~~~~~~~~~~~-~~-----~~~~ 165 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSIDAG--PVD--AWTLAFSPDSQYLATGTH------VGKVNIFGVESGKKEYS-LD-----TRGK 165 (321)
T ss_dssp SEEEEEETTTTEEEEEEECC--TTC--CCCEEECTTSSEEEEECT------TSEEEEEETTTCSEEEE-EE-----CSSS
T ss_pred CcEEEEECCCCCEEEEEeCC--Ccc--EEEEEECCCCCEEEEEcC------CCcEEEEEcCCCceeEE-ec-----CCCc
Confidence 46788898887643322211 111 1122322 3466666664 24688999987642222 21 1112
Q ss_pred cccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcc
Q 001901 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (998)
Q Consensus 229 ~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~ 308 (998)
.-.+++...++.+++.|+.++ .+..||+.+. +-...-.... ......+...++.+++.|+.++.
T Consensus 166 ~v~~~~~spdg~~lasg~~dg-----~i~iwd~~~~--~~~~~~~~h~----~~v~~l~~spd~~~l~s~s~dg~----- 229 (321)
T 3ow8_A 166 FILSIAYSPDGKYLASGAIDG-----IINIFDIATG--KLLHTLEGHA----MPIRSLTFSPDSQLLVTASDDGY----- 229 (321)
T ss_dssp CEEEEEECTTSSEEEEEETTS-----CEEEEETTTT--EEEEEECCCS----SCCCEEEECTTSCEEEEECTTSC-----
T ss_pred eEEEEEECCCCCEEEEEcCCC-----eEEEEECCCC--cEEEEEcccC----CceeEEEEcCCCCEEEEEcCCCe-----
Confidence 223333444556777887765 5788999877 4322211111 01112233346778888876532
Q ss_pred cEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCeE
Q 001901 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (998)
Q Consensus 309 dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W 375 (998)
+..++.... .... ...+. ...-.++++. ++.+++.|+.++ .+.++|+.+.+-
T Consensus 230 -i~iwd~~~~-~~~~-~~~~h---~~~v~~~~~sp~~~~l~s~s~D~---------~v~iwd~~~~~~ 282 (321)
T 3ow8_A 230 -IKIYDVQHA-NLAG-TLSGH---ASWVLNVAFCPDDTHFVSSSSDK---------SVKVWDVGTRTC 282 (321)
T ss_dssp -EEEEETTTC-CEEE-EECCC---SSCEEEEEECTTSSEEEEEETTS---------CEEEEETTTTEE
T ss_pred -EEEEECCCc-ceeE-EEcCC---CCceEEEEECCCCCEEEEEeCCC---------cEEEEeCCCCEE
Confidence 333333322 1111 11111 1111222332 566777777543 388899887754
No 119
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=84.99 E-value=0.38 Score=56.62 Aligned_cols=70 Identities=20% Similarity=0.140 Sum_probs=41.3
Q ss_pred CCeEEEecCCCCHH----------HHHHHHHHcCCCCC-CCCccceeEEEeccccCCCCC-----hHHHHHHHHHhhhcC
Q 001901 698 APIKIFGDLHGQFG----------DLMRLFDEYGSPST-AGDIAYIDYLFLGDYVDRGQH-----SLETITLLLALKVEY 761 (998)
Q Consensus 698 ~~i~vvGDiHG~~~----------dL~~il~~~g~~~~-~~~~~~~~~vfLGDyVDRG~~-----s~evl~ll~~lk~~~ 761 (998)
.+|+.++|+||.+. .+..+++.+.-... .+ ...-+|+.||+++..+. ...++.+|-.|.
T Consensus 9 l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~--~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~lg--- 83 (516)
T 1hp1_A 9 ITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEG--GSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG--- 83 (516)
T ss_dssp EEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHT--CEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHHT---
T ss_pred EEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccC--CCEEEEeCCccCCCcchhhhcCCcHHHHHHhccC---
Confidence 45889999999853 45555554321000 00 00147779999976542 234555555553
Q ss_pred CCcEEEeecCccc
Q 001901 762 PNNVHLIRGNHEA 774 (998)
Q Consensus 762 p~~v~llrGNHE~ 774 (998)
-.++..||||.
T Consensus 84 --~d~~~~GNHEf 94 (516)
T 1hp1_A 84 --YDAMAIGNHEF 94 (516)
T ss_dssp --CCEEECCGGGG
T ss_pred --CCEEeeccccc
Confidence 23677899997
No 120
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=84.44 E-value=55 Score=36.29 Aligned_cols=172 Identities=14% Similarity=0.110 Sum_probs=83.6
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcc
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYG 230 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~ 230 (998)
.+.+||+.+.+-...-.. ....-.+..+.+.+++.|+.+ ..+.+||+.+.. .-..+ ......
T Consensus 140 ~i~vwd~~~~~~~~~~~~-----h~~~v~~~~~~~~~l~s~~~d------g~i~vwd~~~~~-~~~~~------~~h~~~ 201 (445)
T 2ovr_B 140 TLKVWSAVTGKCLRTLVG-----HTGGVWSSQMRDNIIISGSTD------RTLKVWNAETGE-CIHTL------YGHTST 201 (445)
T ss_dssp CEEEEETTTCCEEEECCC-----CSSCEEEEEEETTEEEEEETT------SCEEEEETTTTE-EEEEE------CCCSSC
T ss_pred cEEEEECCCCcEEEEEcC-----CCCCEEEEEecCCEEEEEeCC------CeEEEEECCcCc-EEEEE------CCCCCc
Confidence 678889887664332211 011112222334455666642 468999998753 11111 111122
Q ss_pred cEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccE
Q 001901 231 HVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASA 310 (998)
Q Consensus 231 hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv 310 (998)
-.++.+.+ ..++.|+.++ .+..||+.+....+...... ....++.. ++..++.|+.++. +
T Consensus 202 v~~~~~~~-~~l~s~s~dg-----~i~~wd~~~~~~~~~~~~~~-------~~v~~~~~-~~~~l~~~~~dg~------i 261 (445)
T 2ovr_B 202 VRCMHLHE-KRVVSGSRDA-----TLRVWDIETGQCLHVLMGHV-------AAVRCVQY-DGRRVVSGAYDFM------V 261 (445)
T ss_dssp EEEEEEET-TEEEEEETTS-----EEEEEESSSCCEEEEEECCS-------SCEEEEEE-CSSCEEEEETTSC------E
T ss_pred EEEEEecC-CEEEEEeCCC-----EEEEEECCCCcEEEEEcCCc-------ccEEEEEE-CCCEEEEEcCCCE------E
Confidence 22333344 3567777654 68889988763223222111 11222223 6777777775432 3
Q ss_pred EEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeE
Q 001901 311 YGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (998)
Q Consensus 311 ~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W 375 (998)
..++.... .-.... .+. ...-.++.+++..++.|+.+ ..+.+||..+.+-
T Consensus 262 ~iwd~~~~-~~~~~~-~~~----~~~v~~~~~~~~~l~~~~~d---------~~i~i~d~~~~~~ 311 (445)
T 2ovr_B 262 KVWDPETE-TCLHTL-QGH----TNRVYSLQFDGIHVVSGSLD---------TSIRVWDVETGNC 311 (445)
T ss_dssp EEEEGGGT-EEEEEE-CCC----SSCEEEEEECSSEEEEEETT---------SCEEEEETTTCCE
T ss_pred EEEECCCC-cEeEEe-cCC----CCceEEEEECCCEEEEEeCC---------CeEEEEECCCCCE
Confidence 34443322 111111 111 11122333477777777753 3488999988764
No 121
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=84.19 E-value=36 Score=41.09 Aligned_cols=178 Identities=11% Similarity=0.059 Sum_probs=84.0
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCc
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~ 229 (998)
.+.+||..+......-.. .... -.+++.. ++..++.|+. ...+.+||+.+.. ...... + ....
T Consensus 36 ~v~iwd~~~~~~~~~~~~---~~~~-v~~~~~s~~~~~l~~~~~------dg~i~vw~~~~~~--~~~~~~-~---~~~~ 99 (814)
T 3mkq_A 36 RVEIWNYETQVEVRSIQV---TETP-VRAGKFIARKNWIIVGSD------DFRIRVFNYNTGE--KVVDFE-A---HPDY 99 (814)
T ss_dssp EEEEEETTTTEEEEEEEC---CSSC-EEEEEEEGGGTEEEEEET------TSEEEEEETTTCC--EEEEEE-C---CSSC
T ss_pred EEEEEECCCCceEEEEec---CCCc-EEEEEEeCCCCEEEEEeC------CCeEEEEECCCCc--EEEEEe-c---CCCC
Confidence 688899888765433221 1111 1222222 3455666654 2469999998753 322211 1 1111
Q ss_pred ccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEe--CCEEEEEeccCCCCCCc
Q 001901 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS--DGLLLLCGGRDASSVPL 307 (998)
Q Consensus 230 ~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~--~~~lyvfGG~~~~~~~~ 307 (998)
-.+++...++..++.|+.++ .+..||+.+.. .....-.... ....++... ++.+++.|+.++
T Consensus 100 v~~~~~s~~~~~l~~~~~dg-----~i~vw~~~~~~-~~~~~~~~~~-----~~v~~~~~~p~~~~~l~~~~~dg----- 163 (814)
T 3mkq_A 100 IRSIAVHPTKPYVLSGSDDL-----TVKLWNWENNW-ALEQTFEGHE-----HFVMCVAFNPKDPSTFASGCLDR----- 163 (814)
T ss_dssp EEEEEECSSSSEEEEEETTS-----EEEEEEGGGTS-EEEEEEECCS-----SCEEEEEEETTEEEEEEEEETTS-----
T ss_pred EEEEEEeCCCCEEEEEcCCC-----EEEEEECCCCc-eEEEEEcCCC-----CcEEEEEEEcCCCCEEEEEeCCC-----
Confidence 22333333445666776554 57788886641 2222211111 112223332 567777777543
Q ss_pred ccEEEEecCCCC-eEEEEECCCCCCCCcceeEEEEE---CCEEEEEcccCCCCCccccCCeEEEEECCCCeE
Q 001901 308 ASAYGLAKHRDG-RWEWAIAPGVSPSPRYQHAAVFV---NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (998)
Q Consensus 308 ~dv~~~~~~~~~-~W~w~~~~g~~P~pR~~hsav~~---~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W 375 (998)
.+..++..... .+... .. ....-..+++. ++.++++|+.+ ..+.+||..+.+-
T Consensus 164 -~v~vwd~~~~~~~~~~~--~~---~~~~v~~~~~~~~~~~~~l~~~~~d---------g~i~~~d~~~~~~ 220 (814)
T 3mkq_A 164 -TVKVWSLGQSTPNFTLT--TG---QERGVNYVDYYPLPDKPYMITASDD---------LTIKIWDYQTKSC 220 (814)
T ss_dssp -EEEEEETTCSSCSEEEE--CC---CTTCCCEEEECCSTTCCEEEEECTT---------SEEEEEETTTTEE
T ss_pred -eEEEEECCCCcceeEEe--cC---CCCCEEEEEEEECCCCCEEEEEeCC---------CEEEEEECCCCcE
Confidence 23444432221 11211 11 11111223332 56777777653 3488999887763
No 122
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=84.03 E-value=31 Score=36.71 Aligned_cols=101 Identities=12% Similarity=0.130 Sum_probs=51.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEee---ecCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVV---VQGPG 224 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~---~~g~~ 224 (998)
..+++||+.+.+++.+.... .....-..++.. +..+|+.+.. ...+.+||+... .+...+. ..+..
T Consensus 63 ~~v~~~~~~~g~~~~~~~~~--~~~~~p~~~a~spdg~~l~~~~~~------~~~v~v~~~~~~-g~~~~~~~~~~~~~~ 133 (347)
T 3hfq_A 63 GGIAAWQIDGQTAHKLNTVV--APGTPPAYVAVDEARQLVYSANYH------KGTAEVMKIAAD-GALTLTDTVQHSGHG 133 (347)
T ss_dssp EEEEEEEEETTEEEEEEEEE--EESCCCSEEEEETTTTEEEEEETT------TTEEEEEEECTT-SCEEEEEEEECCCCC
T ss_pred ceEEEEEecCCcEEEeeeee--cCCCCCEEEEECCCCCEEEEEeCC------CCEEEEEEeCCC-CCeeecceeecCCCC
Confidence 47889999888877665420 001111233333 3367766532 246888888532 1233322 22222
Q ss_pred CCCC----cccEEEEECCcEEEEEcCCCCCCCcccEEEEECC-CC
Q 001901 225 PGPR----YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTA-AK 264 (998)
Q Consensus 225 P~~R----~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~-s~ 264 (998)
|.+| .-+.+++-.++.+|+.+..+ +.+++||+. +.
T Consensus 134 p~~~~~~~~~~~~~~spdg~l~v~~~~~-----~~v~~~~~~~~g 173 (347)
T 3hfq_A 134 PRPEQDGSHIHYTDLTPDNRLAVIDLGS-----DKVYVYNVSDAG 173 (347)
T ss_dssp SSTTCSSCCEEEEEECTTSCEEEEETTT-----TEEEEEEECTTS
T ss_pred CCccccCCCceEEEECCCCcEEEEeCCC-----CEEEEEEECCCC
Confidence 3222 23344444455677655432 368888887 44
No 123
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=83.70 E-value=51 Score=35.38 Aligned_cols=114 Identities=5% Similarity=-0.036 Sum_probs=52.4
Q ss_pred cccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEe-CCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCC
Q 001901 253 LADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS-DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSP 331 (998)
Q Consensus 253 lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~-~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P 331 (998)
...++.+|+.+. +...+.... .......... ++..+++............+|.++.... . +..+....+
T Consensus 167 ~~~l~~~d~~~g--~~~~~~~~~-----~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~-~--~~~l~~~~~ 236 (396)
T 3c5m_A 167 TCRLIKVDIETG--ELEVIHQDT-----AWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGS-N--VRKIKEHAE 236 (396)
T ss_dssp CEEEEEEETTTC--CEEEEEEES-----SCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSC-C--CEESSCCCT
T ss_pred cceEEEEECCCC--cEEeeccCC-----cccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCC-c--eeEeeccCC
Confidence 357999999887 665554211 1222223333 3443333322221111246777776433 2 222222101
Q ss_pred CCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccC
Q 001901 332 SPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (998)
Q Consensus 332 ~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~ 381 (998)
.......++. +++.+++........ ...++++|+.+.+...+...
T Consensus 237 -~~~~~~~~~spdg~~l~~~~~~~~~~----~~~l~~~d~~~g~~~~l~~~ 282 (396)
T 3c5m_A 237 -GESCTHEFWIPDGSAMAYVSYFKGQT----DRVIYKANPETLENEEVMVM 282 (396)
T ss_dssp -TEEEEEEEECTTSSCEEEEEEETTTC----CEEEEEECTTTCCEEEEEEC
T ss_pred -CccccceEECCCCCEEEEEecCCCCc----cceEEEEECCCCCeEEeeeC
Confidence 1111122232 455444443322111 23499999999887766543
No 124
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=83.34 E-value=46 Score=36.75 Aligned_cols=96 Identities=18% Similarity=0.160 Sum_probs=47.2
Q ss_pred cCCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCC
Q 001901 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (998)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~ 227 (998)
.-..+.++|+.+.+-...... ... ...+...++.+++.|+.+ ..++++|.......-..+. +. .
T Consensus 167 ~Dg~v~iWd~~~~~~~~~~~~---h~~--~v~~~s~~~~~l~sgs~d------~~i~~~d~~~~~~~~~~~~--~h---~ 230 (420)
T 4gga_A 167 SSAEVQLWDVQQQKRLRNMTS---HSA--RVGSLSWNSYILSSGSRS------GHIHHHDVRVAEHHVATLS--GH---S 230 (420)
T ss_dssp TTSCEEEEETTTTEEEEEECC---CSS--CEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEE--CC---S
T ss_pred CCCeEEEEEcCCCcEEEEEeC---CCC--ceEEEeeCCCEEEEEeCC------CceeEeeecccceeeEEec--cc---c
Confidence 445788899888764333221 111 223344455666666642 4678888776421111221 11 1
Q ss_pred CcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 228 R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
..-.......++..++.|+.++ .+..+|..+.
T Consensus 231 ~~~~~~~~~~~g~~l~s~~~D~-----~v~i~~~~~~ 262 (420)
T 4gga_A 231 QEVCGLRWAPDGRHLASGGNDN-----LVNVWPSAPG 262 (420)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEESSCC
T ss_pred cceeeeeecCCCCeeeeeeccc-----cceEEeeccc
Confidence 1111222223335666676654 4566776554
No 125
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=83.22 E-value=20 Score=39.92 Aligned_cols=147 Identities=14% Similarity=0.130 Sum_probs=71.3
Q ss_pred eCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECC
Q 001901 183 VGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTA 262 (998)
Q Consensus 183 ~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~ 262 (998)
.++..++.|+.+ ..+.+||+.+.. -.... ......-.++.+.+ .+++.|+.++ .+..||+.
T Consensus 141 ~d~~~l~~g~~d------g~i~iwd~~~~~--~~~~~-----~~h~~~v~~l~~~~-~~l~sg~~dg-----~i~vwd~~ 201 (435)
T 1p22_A 141 YDDQKIVSGLRD------NTIKIWDKNTLE--CKRIL-----TGHTGSVLCLQYDE-RVIITGSSDS-----TVRVWDVN 201 (435)
T ss_dssp CCSSEEEEEESS------SCEEEEESSSCC--EEEEE-----CCCSSCEEEEECCS-SEEEEEETTS-----CEEEEESS
T ss_pred ECCCEEEEEeCC------CeEEEEeCCCCe--EEEEE-----cCCCCcEEEEEECC-CEEEEEcCCC-----eEEEEECC
Confidence 355566666642 569999988753 22111 11122223334444 6788887765 57888988
Q ss_pred CCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEE-EECCCCCCCCcceeEEEE
Q 001901 263 AKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEW-AIAPGVSPSPRYQHAAVF 341 (998)
Q Consensus 263 s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w-~~~~g~~P~pR~~hsav~ 341 (998)
+. +-...-... .....++ ...+.+++.|+.++. +..++......... ....+. ...-.++.
T Consensus 202 ~~--~~~~~~~~h-----~~~v~~l-~~~~~~l~s~s~dg~------i~vwd~~~~~~~~~~~~~~~~----~~~v~~~~ 263 (435)
T 1p22_A 202 TG--EMLNTLIHH-----CEAVLHL-RFNNGMMVTCSKDRS------IAVWDMASPTDITLRRVLVGH----RAAVNVVD 263 (435)
T ss_dssp SC--CEEEEECCC-----CSCEEEE-ECCTTEEEEEETTSC------EEEEECSSSSCCEEEEEECCC----SSCEEEEE
T ss_pred CC--cEEEEEcCC-----CCcEEEE-EEcCCEEEEeeCCCc------EEEEeCCCCCCceeeeEecCC----CCcEEEEE
Confidence 77 322211111 1112222 234556667765432 33333332211111 111111 11122333
Q ss_pred ECCEEEEEcccCCCCCccccCCeEEEEECCCCeE
Q 001901 342 VNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (998)
Q Consensus 342 ~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W 375 (998)
.++..++.|+.+ ..+.+||+.+.+-
T Consensus 264 ~~~~~l~s~~~d---------g~i~vwd~~~~~~ 288 (435)
T 1p22_A 264 FDDKYIVSASGD---------RTIKVWNTSTCEF 288 (435)
T ss_dssp EETTEEEEEETT---------SEEEEEETTTCCE
T ss_pred eCCCEEEEEeCC---------CeEEEEECCcCcE
Confidence 366666677643 3488999988754
No 126
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=83.19 E-value=33 Score=37.07 Aligned_cols=202 Identities=11% Similarity=-0.021 Sum_probs=93.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCC-EEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGT-MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~-~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
..+|.+|+.+.+...+... +.......+..-++ .|++.... ..++++|+.+.. -..+. ..|...
T Consensus 60 ~~l~~~d~~~g~~~~lt~~---~~~~~~~~~~spdg~~l~~~~~~-------~~l~~~d~~~g~--~~~~~---~~~~~~ 124 (388)
T 3pe7_A 60 WNYYLLDLNTQVATQLTEG---RGDNTFGGFLSPDDDALFYVKDG-------RNLMRVDLATLE--ENVVY---QVPAEW 124 (388)
T ss_dssp CEEEEEETTTCEEEECCCS---SCBCSSSCEECTTSSEEEEEETT-------TEEEEEETTTCC--EEEEE---ECCTTE
T ss_pred ceEEEEeCCCCceEEeeeC---CCCCccceEEcCCCCEEEEEeCC-------CeEEEEECCCCc--ceeee---echhhc
Confidence 3799999999988877643 22111111222234 44444421 479999998863 33333 223322
Q ss_pred cccEEEE-ECCcEEEEEc---CCC--------------CCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEe
Q 001901 229 YGHVMAL-VGQRYLMAIG---GND--------------GKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS 290 (998)
Q Consensus 229 ~~hs~~~-~~~~~Lyv~G---G~~--------------g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~ 290 (998)
....... -.++.+++.- +.+ .......++.+|+.+. +-..+..... .........
T Consensus 125 ~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g--~~~~l~~~~~-----~~~~~~~sp 197 (388)
T 3pe7_A 125 VGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTG--ESTVILQENQ-----WLGHPIYRP 197 (388)
T ss_dssp EEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTC--CEEEEEEESS-----CEEEEEEET
T ss_pred ccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCC--ceEEeecCCc-----cccccEECC
Confidence 2212211 1222233210 000 0112368999999887 4444432211 222333444
Q ss_pred -CCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEE
Q 001901 291 -DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVL 368 (998)
Q Consensus 291 -~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vy 368 (998)
+++.++|............+|.++.... ....+.... ........++. +++.+++........ ...++++
T Consensus 198 ~dg~~l~~~~~~~~~~~~~~l~~~d~~~~---~~~~l~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~----~~~l~~~ 269 (388)
T 3pe7_A 198 YDDSTVAFCHEGPHDLVDARMWLINEDGT---NMRKVKTHA-EGESCTHEFWVPDGSALVYVSYLKGSP----DRFIYSA 269 (388)
T ss_dssp TEEEEEEEEECSCTTTSSCSEEEEETTSC---CCEESCCCC-TTEEEEEEEECTTSSCEEEEEEETTCC----CEEEEEE
T ss_pred CCCCEEEEEEecCCCCCcceEEEEeCCCC---ceEEeeeCC-CCcccccceECCCCCEEEEEecCCCCC----cceEEEE
Confidence 5665555443322222457787776543 122222211 11111122222 455333322221110 2359999
Q ss_pred ECCCCeEEEcccC
Q 001901 369 DTAAGVWCDTKSV 381 (998)
Q Consensus 369 D~~t~~W~~v~~~ 381 (998)
|+++.+-+.+...
T Consensus 270 d~~~g~~~~l~~~ 282 (388)
T 3pe7_A 270 DPETLENRQLTSM 282 (388)
T ss_dssp CTTTCCEEEEEEE
T ss_pred ecCCCceEEEEcC
Confidence 9999987666544
No 127
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=82.36 E-value=39 Score=40.86 Aligned_cols=182 Identities=10% Similarity=0.022 Sum_probs=86.5
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
..+.+||..+.+....-.. .. ..-.+++.. ++..++.|+. ...+.+||+.+. |........ ...
T Consensus 77 g~i~vw~~~~~~~~~~~~~---~~-~~v~~~~~s~~~~~l~~~~~------dg~i~vw~~~~~---~~~~~~~~~--~~~ 141 (814)
T 3mkq_A 77 FRIRVFNYNTGEKVVDFEA---HP-DYIRSIAVHPTKPYVLSGSD------DLTVKLWNWENN---WALEQTFEG--HEH 141 (814)
T ss_dssp SEEEEEETTTCCEEEEEEC---CS-SCEEEEEECSSSSEEEEEET------TSEEEEEEGGGT---SEEEEEEEC--CSS
T ss_pred CeEEEEECCCCcEEEEEec---CC-CCEEEEEEeCCCCEEEEEcC------CCEEEEEECCCC---ceEEEEEcC--CCC
Confidence 3688899988776443221 01 111122222 3444555553 246889998875 333321111 111
Q ss_pred cccEEEEEC-CcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEe--CCEEEEEeccCCCCC
Q 001901 229 YGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS--DGLLLLCGGRDASSV 305 (998)
Q Consensus 229 ~~hs~~~~~-~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~--~~~lyvfGG~~~~~~ 305 (998)
.-.+++... ++.+++.|+.++ .+..||+.+....+........ ......... ++.+++.|+.++
T Consensus 142 ~v~~~~~~p~~~~~l~~~~~dg-----~v~vwd~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~l~~~~~dg--- 208 (814)
T 3mkq_A 142 FVMCVAFNPKDPSTFASGCLDR-----TVKVWSLGQSTPNFTLTTGQER-----GVNYVDYYPLPDKPYMITASDDL--- 208 (814)
T ss_dssp CEEEEEEETTEEEEEEEEETTS-----EEEEEETTCSSCSEEEECCCTT-----CCCEEEECCSTTCCEEEEECTTS---
T ss_pred cEEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCcceeEEecCCCC-----CEEEEEEEECCCCCEEEEEeCCC---
Confidence 122333333 446777787664 6888998766333433322111 111222222 667777776543
Q ss_pred CcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCeEE
Q 001901 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (998)
Q Consensus 306 ~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~ 376 (998)
.+..++.... .-.... .+. . ..-.++++. ++.+++.|+.++ .+.+||+.+.+-.
T Consensus 209 ---~i~~~d~~~~-~~~~~~-~~~--~-~~v~~~~~~~~~~~l~~~~~dg---------~v~vwd~~~~~~~ 263 (814)
T 3mkq_A 209 ---TIKIWDYQTK-SCVATL-EGH--M-SNVSFAVFHPTLPIIISGSEDG---------TLKIWNSSTYKVE 263 (814)
T ss_dssp ---EEEEEETTTT-EEEEEE-ECC--S-SCEEEEEECSSSSEEEEEETTS---------CEEEEETTTCSEE
T ss_pred ---EEEEEECCCC-cEEEEE-cCC--C-CCEEEEEEcCCCCEEEEEeCCC---------eEEEEECCCCcEE
Confidence 3444444332 211111 111 1 111122222 456777777533 3888898876543
No 128
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=82.33 E-value=50 Score=34.59 Aligned_cols=93 Identities=14% Similarity=0.102 Sum_probs=47.1
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCc
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~ 229 (998)
.+.++|+.+..-...-... .. . -.++... ++.+++.|+. ...+.+||+.+.. .-..+. + ....
T Consensus 36 ~v~lWd~~~~~~~~~~~~~--~~-~-v~~~~~~~~~~~l~s~s~------d~~i~vwd~~~~~-~~~~~~--~---h~~~ 99 (304)
T 2ynn_A 36 RVELWNYETQVEVRSIQVT--ET-P-VRAGKFIARKNWIIVGSD------DFRIRVFNYNTGE-KVVDFE--A---HPDY 99 (304)
T ss_dssp EEEEEETTTTEEEEEEECC--SS-C-EEEEEEEGGGTEEEEEET------TSEEEEEETTTCC-EEEEEE--C---CSSC
T ss_pred cEEEEECCCCceeEEeecc--CC-c-EEEEEEeCCCCEEEEECC------CCEEEEEECCCCc-EEEEEe--C---CCCc
Confidence 6778888877543221110 11 1 1122222 3455666664 2468899998753 122221 1 1112
Q ss_pred ccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 230 ~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
-.+++...++.+++.|+.++ .+..||+.+.
T Consensus 100 v~~~~~~~~~~~l~sgs~D~-----~v~lWd~~~~ 129 (304)
T 2ynn_A 100 IRSIAVHPTKPYVLSGSDDL-----TVKLWNWENN 129 (304)
T ss_dssp EEEEEECSSSSEEEEEETTS-----CEEEEEGGGT
T ss_pred EEEEEEcCCCCEEEEECCCC-----eEEEEECCCC
Confidence 22333444446777787765 5677787654
No 129
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=81.99 E-value=68 Score=35.58 Aligned_cols=173 Identities=13% Similarity=0.075 Sum_probs=84.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
..+.+||+.+.+-...-.. .... -.+++.. ++..++.|+.+ ..+.+||+.+.. .+.. +....
T Consensus 290 ~~i~vwd~~~~~~~~~~~~---~~~~-v~~~~~~~~~~~l~sg~~d------g~i~vwd~~~~~----~~~~---~~~h~ 352 (464)
T 3v7d_B 290 NTLIVWDVAQMKCLYILSG---HTDR-IYSTIYDHERKRCISASMD------TTIRIWDLENGE----LMYT---LQGHT 352 (464)
T ss_dssp SCEEEEETTTTEEEEEECC---CSSC-EEEEEEETTTTEEEEEETT------SCEEEEETTTTE----EEEE---ECCCS
T ss_pred CeEEEEECCCCcEEEEecC---CCCC-EEEEEEcCCCCEEEEEeCC------CcEEEEECCCCc----EEEE---EeCCC
Confidence 3688899887664332211 1111 1222332 34555666542 469999998752 2221 11122
Q ss_pred cccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcc
Q 001901 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (998)
Q Consensus 229 ~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~ 308 (998)
..-..+.+.+ ..++.|+.++ .+..||+.+....+..... ......+...++.+++.|+ ++
T Consensus 353 ~~v~~~~~~~-~~l~s~s~dg-----~v~vwd~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~~-dg------ 412 (464)
T 3v7d_B 353 ALVGLLRLSD-KFLVSAAADG-----SIRGWDANDYSRKFSYHHT-------NLSAITTFYVSDNILVSGS-EN------ 412 (464)
T ss_dssp SCEEEEEECS-SEEEEEETTS-----EEEEEETTTCCEEEEEECT-------TCCCEEEEEECSSEEEEEE-TT------
T ss_pred CcEEEEEEcC-CEEEEEeCCC-----cEEEEECCCCceeeeecCC-------CCccEEEEEeCCCEEEEec-CC------
Confidence 2233444555 5677777664 5888999876323322111 1223334455777777776 21
Q ss_pred cEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEEC
Q 001901 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDT 370 (998)
Q Consensus 309 dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~ 370 (998)
.+..++..+. +.....-. +....-.++++.++.+++.++.++ ..-++++|.
T Consensus 413 ~i~iwd~~~g---~~~~~~~~-~~~~~v~~v~~~~~~l~~~~~~~g-------~~~i~~ldf 463 (464)
T 3v7d_B 413 QFNIYNLRSG---KLVHANIL-KDADQIWSVNFKGKTLVAAVEKDG-------QSFLEILDF 463 (464)
T ss_dssp EEEEEETTTC---CEEESCTT-TTCSEEEEEEEETTEEEEEEEETT-------EEEEEEEEC
T ss_pred eEEEEECCCC---cEEehhhc-cCCCcEEEEEecCCEEEEEEEeCC-------eEEEEEeec
Confidence 3444554433 22222111 122223344455666766665433 233677765
No 130
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=81.30 E-value=44 Score=34.93 Aligned_cols=96 Identities=6% Similarity=-0.001 Sum_probs=44.8
Q ss_pred CcEEEEECC-CCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCC
Q 001901 150 ADVHCYDVL-TNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (998)
Q Consensus 150 ~dv~~yD~~-t~~W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~ 226 (998)
+.+++||+. +.++..+.... ....-+.++.. ++.+|+.+.. ...+.+|++...+.++..+... +.
T Consensus 15 ~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~spdg~~l~~~~~~------~~~v~~~~~~~~~~~~~~~~~~---~~ 82 (343)
T 1ri6_A 15 QQIHVWNLNHEGALTLTQVVD---VPGQVQPMVVSPDKRYLYVGVRP------EFRVLAYRIAPDDGALTFAAES---AL 82 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEEE---CSSCCCCEEECTTSSEEEEEETT------TTEEEEEEECTTTCCEEEEEEE---EC
T ss_pred CeEEEEEECCCCcEEEeeeEe---cCCCCceEEECCCCCEEEEeecC------CCeEEEEEecCCCCceeecccc---cc
Confidence 467778774 45555443321 11112223333 3356665542 1468888877222236555422 11
Q ss_pred CCcccEEEEECCc-EEEEEcCCCCCCCcccEEEEECC
Q 001901 227 PRYGHVMALVGQR-YLMAIGGNDGKRPLADVWALDTA 262 (998)
Q Consensus 227 ~R~~hs~~~~~~~-~Lyv~GG~~g~~~lndv~~yD~~ 262 (998)
...-..++.-.++ .||+.+..+ ..+..||+.
T Consensus 83 ~~~~~~~~~s~dg~~l~~~~~~~-----~~i~~~d~~ 114 (343)
T 1ri6_A 83 PGSLTHISTDHQGQFVFVGSYNA-----GNVSVTRLE 114 (343)
T ss_dssp SSCCSEEEECTTSSEEEEEETTT-----TEEEEEEEE
T ss_pred CCCCcEEEEcCCCCEEEEEecCC-----CeEEEEECC
Confidence 1122334343333 455554322 357778773
No 131
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=81.01 E-value=55 Score=33.91 Aligned_cols=104 Identities=10% Similarity=0.021 Sum_probs=54.2
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-C-CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEe-eecCCCC
Q 001901 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-G-TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRV-VVQGPGP 225 (998)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~-~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l-~~~g~~P 225 (998)
.+.+++||+.+.++..+...........-++++.. + +.+||.... +.+++||.. . +...+ .......
T Consensus 45 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~-------~~l~~~d~~-g--~~~~~~~~~~~~~ 114 (314)
T 1pjx_A 45 AGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR-------LGLLVVQTD-G--TFEEIAKKDSEGR 114 (314)
T ss_dssp CCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT-------TEEEEEETT-S--CEEECCSBCTTSC
T ss_pred CCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC-------CCEEEEeCC-C--CEEEEEeccCCCc
Confidence 34689999988888766431000011122344443 3 588887642 358999987 4 25444 2111101
Q ss_pred CCCcccEEEEECCcEEEEEcCCCC----------CCCcccEEEEECC
Q 001901 226 GPRYGHVMALVGQRYLMAIGGNDG----------KRPLADVWALDTA 262 (998)
Q Consensus 226 ~~R~~hs~~~~~~~~Lyv~GG~~g----------~~~lndv~~yD~~ 262 (998)
....-+.++.-.++.+|+....++ ......+++||+.
T Consensus 115 ~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (314)
T 1pjx_A 115 RMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD 161 (314)
T ss_dssp BCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT
T ss_pred cccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC
Confidence 112233444444557887654321 1113579999986
No 132
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=80.86 E-value=42 Score=40.19 Aligned_cols=110 Identities=7% Similarity=-0.024 Sum_probs=50.1
Q ss_pred cEEEEECCC-CCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCC-C
Q 001901 255 DVWALDTAA-KPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSP-S 332 (998)
Q Consensus 255 dv~~yD~~s-~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P-~ 332 (998)
.++.+|+.+ . +-..+.... .........+. .+++.++++..+... ...+++.++..+. ............ .
T Consensus 264 ~l~~~d~~~~~--~~~~~~~~~--~~~~~~~~~~~-pDg~~l~~~~~~~~~-~~~~i~~~d~~~g-~~~~~~~~~~~~~~ 336 (741)
T 2ecf_A 264 KLGVISPAEQA--QTQWIDLGK--EQDIYLARVNW-RDPQHLSFQRQSRDQ-KKLDLVEVTLASN-QQRVLAHETSPTWV 336 (741)
T ss_dssp EEEEECSSTTC--CCEEECCCS--CSSEEEEEEEE-EETTEEEEEEEETTS-SEEEEEEEETTTC-CEEEEEEEECSSCC
T ss_pred EEEEEECCCCC--ceEEecCCC--CcceEEEEEEe-CCCCEEEEEEecccC-CeEEEEEEECCCC-ceEEEEEcCCCCcC
Confidence 788999987 6 333332110 11112223334 566555554432222 3456777766543 322221110000 0
Q ss_pred CcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcc
Q 001901 333 PRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTK 379 (998)
Q Consensus 333 pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~ 379 (998)
......+..-++++++.++.++ ...+|.+|.... +..+.
T Consensus 337 ~~~~~~~~spdg~~~~~~~~~g-------~~~l~~~~~~~~-~~~l~ 375 (741)
T 2ecf_A 337 PLHNSLRFLDDGSILWSSERTG-------FQHLYRIDSKGK-AAALT 375 (741)
T ss_dssp CCCSCCEECTTSCEEEEECTTS-------SCEEEEECSSSC-EEESC
T ss_pred CcCCceEECCCCeEEEEecCCC-------ccEEEEEcCCCC-eeeee
Confidence 0011112223566666665432 356999997766 55554
No 133
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=80.80 E-value=48 Score=35.15 Aligned_cols=152 Identities=9% Similarity=0.049 Sum_probs=74.2
Q ss_pred CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 185 ~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
+.+++.|+. ...+.+||+.+. +|..+..... ....-.+++...++.+++.|+.++ .+..||+.+.
T Consensus 20 ~~~l~~~~~------d~~v~i~~~~~~--~~~~~~~~~~--h~~~v~~~~~~~~~~~l~~~~~dg-----~i~vwd~~~~ 84 (372)
T 1k8k_C 20 RTQIAICPN------NHEVHIYEKSGN--KWVQVHELKE--HNGQVTGVDWAPDSNRIVTCGTDR-----NAYVWTLKGR 84 (372)
T ss_dssp SSEEEEECS------SSEEEEEEEETT--EEEEEEEEEC--CSSCEEEEEEETTTTEEEEEETTS-----CEEEEEEETT
T ss_pred CCEEEEEeC------CCEEEEEeCCCC--cEEeeeeecC--CCCcccEEEEeCCCCEEEEEcCCC-----eEEEEECCCC
Confidence 456666654 256999998875 3544442211 111222333444446777777654 5778888777
Q ss_pred CceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-C
Q 001901 265 PYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-N 343 (998)
Q Consensus 265 ~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~ 343 (998)
++......... ...........++.+++.|+.++. ..+|.+.... .|........ +....-.++++. +
T Consensus 85 --~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~----v~i~d~~~~~--~~~~~~~~~~-~~~~~i~~~~~~~~ 153 (372)
T 1k8k_C 85 --TWKPTLVILRI--NRAARCVRWAPNEKKFAVGSGSRV----ISICYFEQEN--DWWVCKHIKK-PIRSTVLSLDWHPN 153 (372)
T ss_dssp --EEEEEEECCCC--SSCEEEEEECTTSSEEEEEETTSS----EEEEEEETTT--TEEEEEEECT-TCCSCEEEEEECTT
T ss_pred --eeeeeEEeecC--CCceeEEEECCCCCEEEEEeCCCE----EEEEEecCCC--cceeeeeeec-ccCCCeeEEEEcCC
Confidence 66554322110 011122223346677777775432 2344444332 2221111111 111122233333 5
Q ss_pred CEEEEEcccCCCCCccccCCeEEEEECC
Q 001901 344 ARLHVSGGALGGGRMVEDSSSVAVLDTA 371 (998)
Q Consensus 344 ~~L~V~GG~~~~~~~~~~~~dv~vyD~~ 371 (998)
+.+++.|+.+ ..+.+||..
T Consensus 154 ~~~l~~~~~d---------g~i~~~d~~ 172 (372)
T 1k8k_C 154 SVLLAAGSCD---------FKCRIFSAY 172 (372)
T ss_dssp SSEEEEEETT---------SCEEEEECC
T ss_pred CCEEEEEcCC---------CCEEEEEcc
Confidence 6677777753 347888864
No 134
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=80.59 E-value=58 Score=33.89 Aligned_cols=180 Identities=13% Similarity=0.117 Sum_probs=83.6
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
..+.+||+.+.+-...-.. .... -.++... ++.+++.|+.+ ..+.+||+.+.. .-..+ +...
T Consensus 87 ~~i~vwd~~~~~~~~~~~~---~~~~-v~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~~-~~~~~------~~~~ 149 (312)
T 4ery_A 87 KTLKIWDVSSGKCLKTLKG---HSNY-VFCCNFNPQSNLIVSGSFD------ESVRIWDVKTGK-CLKTL------PAHS 149 (312)
T ss_dssp SEEEEEETTTCCEEEEEEC---CSSC-EEEEEECSSSSEEEEEETT------SCEEEEETTTCC-EEEEE------CCCS
T ss_pred CEEEEEECCCCcEEEEEcC---CCCC-EEEEEEcCCCCEEEEEeCC------CcEEEEECCCCE-EEEEe------cCCC
Confidence 4678889887653322111 0111 1112222 34566666642 468999998753 11111 1111
Q ss_pred ccc-EEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCc
Q 001901 229 YGH-VMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPL 307 (998)
Q Consensus 229 ~~h-s~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~ 307 (998)
..- ++....++.+++.|+.++ .+..||+.+. +....-..... ..........++..++.|+.++
T Consensus 150 ~~v~~~~~~~~~~~l~~~~~d~-----~i~~wd~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~d~----- 214 (312)
T 4ery_A 150 DPVSAVHFNRDGSLIVSSSYDG-----LCRIWDTASG--QCLKTLIDDDN---PPVSFVKFSPNGKYILAATLDN----- 214 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEETTTC--CEEEEECCSSC---CCEEEEEECTTSSEEEEEETTT-----
T ss_pred CcEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCC--ceeeEEeccCC---CceEEEEECCCCCEEEEEcCCC-----
Confidence 112 222333446777787665 5788999876 33221111110 1112222334566667776543
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCccee--EEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCe
Q 001901 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQH--AAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (998)
Q Consensus 308 ~dv~~~~~~~~~~W~w~~~~g~~P~pR~~h--sav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~ 374 (998)
.+..|+.... .-.... .+.. ...... .....++.+++.|+.++ .+.+||..+.+
T Consensus 215 -~i~iwd~~~~-~~~~~~-~~~~-~~~~~~~~~~~~~~~~~l~sg~~dg---------~i~vwd~~~~~ 270 (312)
T 4ery_A 215 -TLKLWDYSKG-KCLKTY-TGHK-NEKYCIFANFSVTGGKWIVSGSEDN---------LVYIWNLQTKE 270 (312)
T ss_dssp -EEEEEETTTT-EEEEEE-CSSC-CSSSCCCEEEECSSSCEEEECCTTS---------CEEEEETTTCC
T ss_pred -eEEEEECCCC-cEEEEE-EecC-CceEEEEEEEEeCCCcEEEEECCCC---------EEEEEECCCch
Confidence 2344444332 211111 1111 111111 12223567788887543 38889988775
No 135
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=80.30 E-value=9.9 Score=46.47 Aligned_cols=196 Identities=10% Similarity=0.116 Sum_probs=91.0
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe--C--CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCC
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--G--TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~--~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~ 226 (998)
.+.++|+.+.+|..+.... .....-..+.+ + +.+++.|+.+ ..+.+||+.+.. ........+. +
T Consensus 78 ~I~vwd~~~~~~~~~~~~~---~h~~~V~~v~~sp~~~~~~l~sgs~d------g~I~vwdl~~~~-~~~~~~~~~~-~- 145 (753)
T 3jro_A 78 KVLIWKEENGRWSQIAVHA---VHSASVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKENG-TTSPIIIDAH-A- 145 (753)
T ss_dssp CEEEEEEETTEEEEEEEEC---CCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEECCSSS-CCCCEEEECC-S-
T ss_pred eEEEEECCCCccccccccc---CCCCCeEEEEECCCCCCCEEEEEeCC------CcEEEEEeecCC-CcceeEeecC-C-
Confidence 6788999898887665441 11112222222 2 5566667642 468899987652 1111111110 1
Q ss_pred CCcccEEEEEC-------------CcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeC--
Q 001901 227 PRYGHVMALVG-------------QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSD-- 291 (998)
Q Consensus 227 ~R~~hs~~~~~-------------~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~-- 291 (998)
..-.++.... ++.+++.|+.++ .+..||+.+....|..+...... .......+...+
T Consensus 146 -~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg-----~I~iwd~~~~~~~~~~~~~~~~h--~~~V~~l~~sp~~~ 217 (753)
T 3jro_A 146 -IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGH--SDWVRDVAWSPTVL 217 (753)
T ss_dssp -SCEEEEEECCCC---------CGGGCCEEEEETTS-----CEEEEEEETTTTEEEEEEEECCC--SSCEEEEEECCCCS
T ss_pred -CceEEEEecCcccccccccccCCCCCEEEEEECCC-----eEEEEeccCCcccceeeeeecCC--CCcEEEEEeccCCC
Confidence 1111122222 245777777665 46777776553355544332210 011122222334
Q ss_pred -CEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEE
Q 001901 292 -GLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLD 369 (998)
Q Consensus 292 -~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD 369 (998)
+.+++.||.++. ..+|.+..... .+........ .....-.++++. ++.+++.||.++ .|.+||
T Consensus 218 ~~~~l~s~s~Dg~----I~iwd~~~~~~-~~~~~~~~~~-~~~~~v~~l~~spdg~~l~s~s~Dg---------~I~vwd 282 (753)
T 3jro_A 218 LRSYLASVSQDRT----CIIWTQDNEQG-PWKKTLLKEE-KFPDVLWRASWSLSGNVLALSGGDN---------KVTLWK 282 (753)
T ss_dssp SSEEEEEEESSSC----EEEEEESSSSS-CCBCCBSSSS-CCSSCCCCEEECTTTCCEEEECSSS---------CEECCB
T ss_pred CCCEEEEEecCCE----EEEecCCCCCC-cceeEEeccC-CCCCceEEEEEcCCCCEEEEEcCCC---------EEEEEe
Confidence 788888886543 23444433211 1110111100 011111223332 567777777543 377788
Q ss_pred CCC-CeEEEcccC
Q 001901 370 TAA-GVWCDTKSV 381 (998)
Q Consensus 370 ~~t-~~W~~v~~~ 381 (998)
..+ ..|......
T Consensus 283 ~~~~~~~~~~~~~ 295 (753)
T 3jro_A 283 ENLEGKWEPAGEV 295 (753)
T ss_dssp CCSSSCCBCCCCB
T ss_pred cCCCCCccccccc
Confidence 774 456554443
No 136
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=80.13 E-value=34 Score=41.24 Aligned_cols=132 Identities=15% Similarity=0.173 Sum_probs=73.4
Q ss_pred EEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCC--CCC---CcccEEEEECCcEEEEEcCCCCCCCcc
Q 001901 180 ATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPG--PGP---RYGHVMALVGQRYLMAIGGNDGKRPLA 254 (998)
Q Consensus 180 a~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~--P~~---R~~hs~~~~~~~~Lyv~GG~~g~~~ln 254 (998)
-++.++.||+... .+.++.+|..+....|+.-...... +.. ....+.++.++ .||+... + .
T Consensus 73 P~v~~g~vyv~~~-------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~-~v~v~~~-d-----g 138 (677)
T 1kb0_A 73 PVVVDGIMYVSAS-------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKG-KVYVGAW-D-----G 138 (677)
T ss_dssp CEEETTEEEEECG-------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETT-EEEEECT-T-----S
T ss_pred CEEECCEEEEECC-------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECC-EEEEEcC-C-----C
Confidence 4567889998865 2579999999876679875421100 000 11223444555 6777532 2 4
Q ss_pred cEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCC-CeEEEEECC
Q 001901 255 DVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRD-GRWEWAIAP 327 (998)
Q Consensus 255 dv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~-~~W~w~~~~ 327 (998)
.++.+|..+....|+.-..... +.......+.++.++++|+..+..... ....++.|+..+. -.|++....
T Consensus 139 ~l~alD~~tG~~~W~~~~~~~~-~~~~~~~~~p~v~~~~v~v~~~~~~~~-~~g~v~a~D~~tG~~~W~~~~~~ 210 (677)
T 1kb0_A 139 RLIALDAATGKEVWHQNTFEGQ-KGSLTITGAPRVFKGKVIIGNGGAEYG-VRGYITAYDAETGERKWRWFSVP 210 (677)
T ss_dssp EEEEEETTTCCEEEEEETTTTC-CSSCBCCSCCEEETTEEEECCBCTTTC-CBCEEEEEETTTCCEEEEEESSC
T ss_pred EEEEEECCCCCEEeeecCCcCc-CcCcccccCcEEECCEEEEEecccccC-CCCEEEEEECCCCcEEEEeccCC
Confidence 6999999998888987543110 111112223345688887754322211 2345777776533 246665443
No 137
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=79.80 E-value=23 Score=38.25 Aligned_cols=205 Identities=13% Similarity=0.020 Sum_probs=92.5
Q ss_pred cCCcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CC-EEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCC
Q 001901 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GT-MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (998)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~-~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P 225 (998)
....++.+|+.+.+...+... .....+....- ++ .|++... .........+|++|+.+. ++..+.. .
T Consensus 166 ~~~~l~~~d~~~g~~~~~~~~----~~~~~~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~~--~~~~l~~----~ 234 (396)
T 3c5m_A 166 PTCRLIKVDIETGELEVIHQD----TAWLGHPIYRPFDDSTVGFCHE-GPHDLVDARMWLVNEDGS--NVRKIKE----H 234 (396)
T ss_dssp CCEEEEEEETTTCCEEEEEEE----SSCEEEEEEETTEEEEEEEEEC-SCSSSCSCCCEEEETTSC--CCEESSC----C
T ss_pred CcceEEEEECCCCcEEeeccC----CcccccceECCCCCCEEEEEec-CCCCCCCceEEEEECCCC--ceeEeec----c
Confidence 445899999999888777532 11222222222 23 3444432 222222357999998765 3555541 1
Q ss_pred CCCcc-cEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEe-CCEEEEEeccCCC
Q 001901 226 GPRYG-HVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS-DGLLLLCGGRDAS 303 (998)
Q Consensus 226 ~~R~~-hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~-~~~lyvfGG~~~~ 303 (998)
.+... .....-.++..+++...........++++|+.+. +...+..... . ...... +++++++.+.+..
T Consensus 235 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g--~~~~l~~~~~-----~--~~~~s~~dg~~l~~~~~~~p 305 (396)
T 3c5m_A 235 AEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETL--ENEEVMVMPP-----C--SHLMSNFDGSLMVGDGCDAP 305 (396)
T ss_dssp CTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTC--CEEEEEECCS-----E--EEEEECSSSSEEEEEECCC-
T ss_pred CCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCC--CeEEeeeCCC-----C--CCCccCCCCceEEEecCCcc
Confidence 11111 1222222333333333222222234999999887 6555543211 1 133444 6777766543210
Q ss_pred ----------CCCcccEEEEecCCCCeEEEEECCCCCC------CC-cceeEEEEECCEEEEEcccCCCCCccccCCeEE
Q 001901 304 ----------SVPLASAYGLAKHRDGRWEWAIAPGVSP------SP-RYQHAAVFVNARLHVSGGALGGGRMVEDSSSVA 366 (998)
Q Consensus 304 ----------~~~~~dv~~~~~~~~~~W~w~~~~g~~P------~p-R~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~ 366 (998)
......++.++.... ............ .. ...+.+..-+++.+++...... ...+|
T Consensus 306 ~~~~~~~~~~~~~~~~i~~~d~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~------~~~l~ 378 (396)
T 3c5m_A 306 VDVADADSYNIENDPFLYVLNTKAK-SAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEG------VPAIY 378 (396)
T ss_dssp ---------CCCCCCEEEEEETTTT-BCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTS------SCEEE
T ss_pred eeeccccccccCCCCcEEEEecccC-ceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCC------CceEE
Confidence 011246777765433 222222111100 00 0111112224544444332221 34699
Q ss_pred EEECCCCeEEEcc
Q 001901 367 VLDTAAGVWCDTK 379 (998)
Q Consensus 367 vyD~~t~~W~~v~ 379 (998)
.+|+.+..++.+.
T Consensus 379 ~~~~~~~~~~~~~ 391 (396)
T 3c5m_A 379 IADVPESYKHLEH 391 (396)
T ss_dssp EEECCTTCC----
T ss_pred EEEEccccccccc
Confidence 9999988876654
No 138
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=79.36 E-value=78 Score=38.42 Aligned_cols=187 Identities=12% Similarity=0.035 Sum_probs=97.6
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecC--CCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG--PGPG 226 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g--~~P~ 226 (998)
.-+++||+.+.+++.+...+ .....-.+.+.. ++.|+|... .-+++||..+.. |....... .++.
T Consensus 427 ~Gl~~~~~~~~~~~~~~~~~--~~~~~v~~i~~d~~g~lwigt~--------~Gl~~~~~~~~~--~~~~~~~~~~~~~~ 494 (781)
T 3v9f_A 427 GNISYYNTRLKKFQIIELEK--NELLDVRVFYEDKNKKIWIGTH--------AGVFVIDLASKK--VIHHYDTSNSQLLE 494 (781)
T ss_dssp EEEEEECSSSCEEEECCSTT--TCCCCEEEEEECTTSEEEEEET--------TEEEEEESSSSS--CCEEECTTTSSCSC
T ss_pred CCEEEEcCCCCcEEEeccCC--CCCCeEEEEEECCCCCEEEEEC--------CceEEEeCCCCe--EEecccCccccccc
Confidence 56888999888888775321 111222233333 347777432 358999998764 65554211 1111
Q ss_pred CCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEE-eCCEEEEEeccCCCCC
Q 001901 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASAR-SDGLLLLCGGRDASSV 305 (998)
Q Consensus 227 ~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~-~~~~lyvfGG~~~~~~ 305 (998)
. .-.+++.-.++.||+..-. .-+++||+.+. +|+........|. ....+... .++.||+...
T Consensus 495 ~-~i~~i~~d~~g~lWigt~~------~Gl~~~~~~~~--~~~~~~~~~~l~~--~~i~~i~~d~~g~lWi~T~------ 557 (781)
T 3v9f_A 495 N-FVRSIAQDSEGRFWIGTFG------GGVGIYTPDMQ--LVRKFNQYEGFCS--NTINQIYRSSKGQMWLATG------ 557 (781)
T ss_dssp S-CEEEEEECTTCCEEEEESS------SCEEEECTTCC--EEEEECTTTTCSC--SCEEEEEECTTSCEEEEET------
T ss_pred c-eeEEEEEcCCCCEEEEEcC------CCEEEEeCCCC--eEEEccCCCCCCC--CeeEEEEECCCCCEEEEEC------
Confidence 1 1123333334467764321 24889999888 7877654222221 11122222 3678888532
Q ss_pred CcccE-EEEecCCCCeEEEEECC-CCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccC
Q 001901 306 PLASA-YGLAKHRDGRWEWAIAP-GVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (998)
Q Consensus 306 ~~~dv-~~~~~~~~~~W~w~~~~-g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~ 381 (998)
..+ +.|+.... ++...... +. |.... .+++.. ++.|++.+. +-+.+||+.+.++......
T Consensus 558 --~Glv~~~d~~~~-~~~~~~~~~gl-~~~~i-~~i~~d~~g~lW~~t~-----------~Gl~~~~~~~~~~~~~~~~ 620 (781)
T 3v9f_A 558 --EGLVCFPSARNF-DYQVFQRKEGL-PNTHI-RAISEDKNGNIWASTN-----------TGISCYITSKKCFYTYDHS 620 (781)
T ss_dssp --TEEEEESCTTTC-CCEEECGGGTC-SCCCC-CEEEECSSSCEEEECS-----------SCEEEEETTTTEEEEECGG
T ss_pred --CCceEEECCCCC-cEEEccccCCC-CCceE-EEEEECCCCCEEEEcC-----------CceEEEECCCCceEEeccc
Confidence 224 55555433 33333222 22 22222 333333 567887541 2388999999998876543
No 139
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=78.98 E-value=66 Score=33.61 Aligned_cols=187 Identities=12% Similarity=0.038 Sum_probs=88.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCC-CCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGP-GPGP 227 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~-~P~~ 227 (998)
..+++||+.+.....+... . + -.+++.. ++.+|+.. .+.+++||+.+. ++..+..... .+..
T Consensus 35 ~~i~~~d~~~~~~~~~~~~----~-~-~~~i~~~~dG~l~v~~--------~~~l~~~d~~~g--~~~~~~~~~~~~~~~ 98 (297)
T 3g4e_A 35 KKVCRWDSFTKQVQRVTMD----A-P-VSSVALRQSGGYVATI--------GTKFCALNWKEQ--SAVVLATVDNDKKNN 98 (297)
T ss_dssp TEEEEEETTTCCEEEEECS----S-C-EEEEEEBTTSSEEEEE--------TTEEEEEETTTT--EEEEEEECCTTCSSE
T ss_pred CEEEEEECCCCcEEEEeCC----C-c-eEEEEECCCCCEEEEE--------CCeEEEEECCCC--cEEEEEecCCCCCCC
Confidence 4789999998876554321 1 1 1233333 34666543 146999999875 3665543211 1222
Q ss_pred CcccEEEEECCcEEEEEcCCCC------CCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeC-CEEEEEecc
Q 001901 228 RYGHVMALVGQRYLMAIGGNDG------KRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSD-GLLLLCGGR 300 (998)
Q Consensus 228 R~~hs~~~~~~~~Lyv~GG~~g------~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~-~~lyvfGG~ 300 (998)
|.. .+++-.++.+|+..-... ......+|++|.... ...+..... .-...+...+ +.||+....
T Consensus 99 ~~~-di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~---~~~~~~~~~-----~pngi~~spdg~~lyv~~~~ 169 (297)
T 3g4e_A 99 RFN-DGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH---VKKYFDQVD-----ISNGLDWSLDHKIFYYIDSL 169 (297)
T ss_dssp EEE-EEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC---EEEEEEEES-----BEEEEEECTTSCEEEEEEGG
T ss_pred CCC-CEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC---EEEEeeccc-----cccceEEcCCCCEEEEecCC
Confidence 222 233333446776321111 112357899988532 332221111 1111122223 467776532
Q ss_pred CCCCCCcccEEEEecC-CCCeEE----EEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCe
Q 001901 301 DASSVPLASAYGLAKH-RDGRWE----WAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (998)
Q Consensus 301 ~~~~~~~~dv~~~~~~-~~~~W~----w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~ 374 (998)
...++.|+.. .++... +..... ....-.++++- +++|||.... ...|++||+++.+
T Consensus 170 ------~~~i~~~~~d~~~G~~~~~~~~~~~~~---~~~~p~g~~~d~~G~lwva~~~---------~~~v~~~d~~tG~ 231 (297)
T 3g4e_A 170 ------SYSVDAFDYDLQTGQISNRRSVYKLEK---EEQIPDGMCIDAEGKLWVACYN---------GGRVIRLDPVTGK 231 (297)
T ss_dssp ------GTEEEEEEECTTTCCEEEEEEEEECCG---GGCEEEEEEEBTTSCEEEEEET---------TTEEEEECTTTCC
T ss_pred ------CCcEEEEeccCCCCcccCcEEEEECCC---CCCCCCeeEECCCCCEEEEEcC---------CCEEEEEcCCCce
Confidence 2346666542 333332 112211 11112233332 5788886421 2349999999877
Q ss_pred EEEcc
Q 001901 375 WCDTK 379 (998)
Q Consensus 375 W~~v~ 379 (998)
....-
T Consensus 232 ~~~~i 236 (297)
T 3g4e_A 232 RLQTV 236 (297)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 65433
No 140
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=78.34 E-value=86 Score=34.52 Aligned_cols=92 Identities=8% Similarity=0.062 Sum_probs=46.3
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCc
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~ 229 (998)
.+.++|..+......-.. .. ..-.+++.. ++.+++.|+.+ ..+.+||+.+.. .+. .+.....
T Consensus 131 ~i~vwd~~~~~~~~~l~~---h~-~~V~~v~~~~~~~~l~sgs~D------~~i~iwd~~~~~----~~~---~~~~h~~ 193 (410)
T 1vyh_C 131 TIKVWDYETGDFERTLKG---HT-DSVQDISFDHSGKLLASCSAD------MTIKLWDFQGFE----CIR---TMHGHDH 193 (410)
T ss_dssp CEEEEETTTCCCCEEECC---CS-SCEEEEEECTTSSEEEEEETT------SCCCEEETTSSC----EEE---CCCCCSS
T ss_pred eEEEEECCCCcEEEEEec---cC-CcEEEEEEcCCCCEEEEEeCC------CeEEEEeCCCCc----eeE---EEcCCCC
Confidence 677888887653322111 01 011122222 34667777653 357788887642 222 1221111
Q ss_pred c-cEEEEECCcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 230 G-HVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 230 ~-hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
. .++....++..++.|+.++ .+..||+.+.
T Consensus 194 ~V~~v~~~p~~~~l~s~s~D~-----~i~~wd~~~~ 224 (410)
T 1vyh_C 194 NVSSVSIMPNGDHIVSASRDK-----TIKMWEVQTG 224 (410)
T ss_dssp CEEEEEECSSSSEEEEEETTS-----EEEEEETTTC
T ss_pred CEEEEEEeCCCCEEEEEeCCC-----eEEEEECCCC
Confidence 1 2233333445677777664 6788898776
No 141
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=77.92 E-value=1.2e+02 Score=36.12 Aligned_cols=200 Identities=11% Similarity=0.026 Sum_probs=99.2
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCC----------CCCcccEEEEEcCCCCCceEEe
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPA----------GLSAEDLHVLDLTQQRPRWHRV 218 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~----------~~~~~dv~~~Dl~t~t~~W~~l 218 (998)
..++++|+.+++....... ... ..+.+.. +++.++++..... ......+|++++.+...+-..+
T Consensus 151 ~~i~v~d~~tg~~~~~~~~----~~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v 225 (710)
T 2xdw_A 151 VTIKFMKVDGAKELPDVLE----RVK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILC 225 (710)
T ss_dssp EEEEEEETTTTEEEEEEEE----EEC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEE
T ss_pred EEEEEEECCCCCCCccccc----Ccc-cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEE
Confidence 3799999999988765322 111 1122322 3443344332221 0223569999998753111222
Q ss_pred eecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCC------CCceEEEcccCCCCCCCccceEEEEEeCC
Q 001901 219 VVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA------KPYEWRKLEPEGEGPPPCMYATASARSDG 292 (998)
Q Consensus 219 ~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s------~~~~W~~v~~~~~~P~~r~~~~a~~~~~~ 292 (998)
. . ....+.+......-.+++.++++...+....+++|.+|+.+ ....|..+..... .........++
T Consensus 226 ~-~-~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~s~dg~ 298 (710)
T 2xdw_A 226 A-E-FPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFE-----GEYDYVTNEGT 298 (710)
T ss_dssp E-C-CTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS-----SCEEEEEEETT
T ss_pred e-c-cCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCC-----cEEEEEeccCC
Confidence 2 1 11122333333333443444444332222257899999975 3224666644221 11222334567
Q ss_pred EEEEEeccCCCCCCcccEEEEecCCCC--eEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEE
Q 001901 293 LLLLCGGRDASSVPLASAYGLAKHRDG--RWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLD 369 (998)
Q Consensus 293 ~lyvfGG~~~~~~~~~dv~~~~~~~~~--~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD 369 (998)
.||+.+..+. ....++.++..... .|+...... +. ..-..+... ++++++....++ ...++++|
T Consensus 299 ~l~~~s~~~~---~~~~l~~~d~~~~~~~~~~~l~~~~--~~-~~~~~~~~~~~~~lv~~~~~~g-------~~~l~~~~ 365 (710)
T 2xdw_A 299 VFTFKTNRHS---PNYRLINIDFTDPEESKWKVLVPEH--EK-DVLEWVACVRSNFLVLCYLHDV-------KNTLQLHD 365 (710)
T ss_dssp EEEEEECTTC---TTCEEEEEETTSCCGGGCEEEECCC--SS-CEEEEEEEETTTEEEEEEEETT-------EEEEEEEE
T ss_pred EEEEEECCCC---CCCEEEEEeCCCCCcccceeccCCC--CC-CeEEEEEEEcCCEEEEEEEECC-------EEEEEEEE
Confidence 8888765432 23467777665432 355433221 11 123344555 678877765433 34599999
Q ss_pred CCCCe
Q 001901 370 TAAGV 374 (998)
Q Consensus 370 ~~t~~ 374 (998)
+.+.+
T Consensus 366 ~~~g~ 370 (710)
T 2xdw_A 366 LATGA 370 (710)
T ss_dssp TTTCC
T ss_pred CCCCC
Confidence 86654
No 142
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=77.88 E-value=1.4 Score=52.17 Aligned_cols=68 Identities=21% Similarity=0.213 Sum_probs=42.8
Q ss_pred cCCeEEEecCCCCH--------------------HHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCCh-----HHHH
Q 001901 697 KAPIKIFGDLHGQF--------------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS-----LETI 751 (998)
Q Consensus 697 ~~~i~vvGDiHG~~--------------------~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s-----~evl 751 (998)
+-.|+.+.|+||.+ ..|..+++...-.... .-+|+.||.++..+.+ ..++
T Consensus 25 ~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~-----~l~l~~GD~~~g~~~~~~~~g~~~~ 99 (546)
T 4h2g_A 25 ELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPN-----VLLLDAGDQYQGTIWFTVYKGAEVA 99 (546)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSS-----EEEEECSCCSSSSHHHHHHTTHHHH
T ss_pred EEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCC-----EEEEECCccCCCchhhhhhCChHHH
Confidence 34688999999874 4455565554321111 1467799999987543 3455
Q ss_pred HHHHHhhhcCCCcEEEeecCccc
Q 001901 752 TLLLALKVEYPNNVHLIRGNHEA 774 (998)
Q Consensus 752 ~ll~~lk~~~p~~v~llrGNHE~ 774 (998)
.+|-.+.. -++..||||.
T Consensus 100 ~~ln~lg~-----d~~~~GNHEf 117 (546)
T 4h2g_A 100 HFMNALRY-----DAMALGNHEF 117 (546)
T ss_dssp HHHHHHTC-----SEEECCGGGG
T ss_pred HHHHhcCC-----cEEeccCccc
Confidence 56555532 2577899996
No 143
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=77.80 E-value=34 Score=36.80 Aligned_cols=162 Identities=12% Similarity=0.105 Sum_probs=76.5
Q ss_pred CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCC
Q 001901 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (998)
Q Consensus 184 ~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s 263 (998)
++.+++.||.+ ..+.+||+.+. +|........ .....-.+++.-.++.+++.|+.++ .+..+|..+
T Consensus 27 ~g~~las~~~D------~~i~iw~~~~~--~~~~~~~~~~-~h~~~v~~~~~sp~g~~l~s~s~D~-----~v~iw~~~~ 92 (345)
T 3fm0_A 27 AGTLLASCGGD------RRIRIWGTEGD--SWICKSVLSE-GHQRTVRKVAWSPCGNYLASASFDA-----TTCIWKKNQ 92 (345)
T ss_dssp TSSCEEEEETT------SCEEEEEEETT--EEEEEEEECS-SCSSCEEEEEECTTSSEEEEEETTS-----CEEEEEECC
T ss_pred CCCEEEEEcCC------CeEEEEEcCCC--cceeeeeecc-ccCCcEEEEEECCCCCEEEEEECCC-----cEEEEEccC
Confidence 34666666642 45888888775 3543321100 1111112233333446777888765 455667666
Q ss_pred CCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEE-CCCCCCCCcceeEEEEE
Q 001901 264 KPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAI-APGVSPSPRYQHAAVFV 342 (998)
Q Consensus 264 ~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~-~~g~~P~pR~~hsav~~ 342 (998)
. .+..+.....- ...-...+...++.+++.|+.++. ..+|.+ .....+.... ..+. ...-.++++.
T Consensus 93 ~--~~~~~~~~~~h--~~~v~~v~~sp~~~~l~s~s~D~~----v~iwd~--~~~~~~~~~~~~~~h---~~~v~~~~~~ 159 (345)
T 3fm0_A 93 D--DFECVTTLEGH--ENEVKSVAWAPSGNLLATCSRDKS----VWVWEV--DEEDEYECVSVLNSH---TQDVKHVVWH 159 (345)
T ss_dssp C---EEEEEEECCC--SSCEEEEEECTTSSEEEEEETTSC----EEEEEE--CTTSCEEEEEEECCC---CSCEEEEEEC
T ss_pred C--CeEEEEEccCC--CCCceEEEEeCCCCEEEEEECCCe----EEEEEC--CCCCCeEEEEEecCc---CCCeEEEEEC
Confidence 6 44433222110 011112222346778888876542 233433 2222222111 1111 0111122222
Q ss_pred -CCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccC
Q 001901 343 -NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (998)
Q Consensus 343 -~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~ 381 (998)
++.+++.|+.++ .+.+||..+..|..+..+
T Consensus 160 p~~~~l~s~s~d~---------~i~~w~~~~~~~~~~~~~ 190 (345)
T 3fm0_A 160 PSQELLASASYDD---------TVKLYREEEDDWVCCATL 190 (345)
T ss_dssp SSSSCEEEEETTS---------CEEEEEEETTEEEEEEEE
T ss_pred CCCCEEEEEeCCC---------cEEEEEecCCCEEEEEEe
Confidence 466777777543 378889888888755444
No 144
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=77.61 E-value=67 Score=34.91 Aligned_cols=26 Identities=15% Similarity=0.252 Sum_probs=18.4
Q ss_pred CCEEEEEcccCCCCCccccCCeEEEEECCCCeEEE
Q 001901 343 NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (998)
Q Consensus 343 ~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~ 377 (998)
++..++.|+.++ .+.++|+.+..-..
T Consensus 260 ~~~~l~s~s~D~---------~i~lwd~~~~~~~~ 285 (380)
T 3iz6_a 260 DGQRFGTGSDDG---------TCRLFDMRTGHQLQ 285 (380)
T ss_dssp TSSEEEEECSSS---------CEEEEETTTTEEEE
T ss_pred CCCeEEEEcCCC---------eEEEEECCCCcEEE
Confidence 567788887643 38889998876443
No 145
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=77.14 E-value=74 Score=33.12 Aligned_cols=95 Identities=14% Similarity=0.065 Sum_probs=46.0
Q ss_pred cEEEEECC--CCcEEEecCCCCCCCCccceEEEEe-C-CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCC
Q 001901 151 DVHCYDVL--TNKWSRITPFGEPPTPRAAHVATAV-G-TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (998)
Q Consensus 151 dv~~yD~~--t~~W~~l~~~g~~P~pR~~hsa~~~-~-~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~ 226 (998)
.+.+|++. +.++..+.... ....-+.++.. + +.+|+.+.. ...+++||+.... ....+... +.
T Consensus 61 ~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~------~~~i~~~d~~~~~-~~~~~~~~---~~ 127 (343)
T 1ri6_A 61 RVLAYRIAPDDGALTFAAESA---LPGSLTHISTDHQGQFVFVGSYN------AGNVSVTRLEDGL-PVGVVDVV---EG 127 (343)
T ss_dssp EEEEEEECTTTCCEEEEEEEE---CSSCCSEEEECTTSSEEEEEETT------TTEEEEEEEETTE-EEEEEEEE---CC
T ss_pred eEEEEEecCCCCceeeccccc---cCCCCcEEEEcCCCCEEEEEecC------CCeEEEEECCCCc-cccccccc---cC
Confidence 56666665 77777664331 11122233333 2 356665532 2458888884211 12233221 11
Q ss_pred CCcccEEEEECC-cEEEEEcCCCCCCCcccEEEEECCC
Q 001901 227 PRYGHVMALVGQ-RYLMAIGGNDGKRPLADVWALDTAA 263 (998)
Q Consensus 227 ~R~~hs~~~~~~-~~Lyv~GG~~g~~~lndv~~yD~~s 263 (998)
...-+.++...+ +.||+.+..+ ..+.+||+.+
T Consensus 128 ~~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~ 160 (343)
T 1ri6_A 128 LDGCHSANISPDNRTLWVPALKQ-----DRICLFTVSD 160 (343)
T ss_dssp CTTBCCCEECTTSSEEEEEEGGG-----TEEEEEEECT
T ss_pred CCCceEEEECCCCCEEEEecCCC-----CEEEEEEecC
Confidence 222333434433 3576655232 3688999877
No 146
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=76.89 E-value=77 Score=33.24 Aligned_cols=103 Identities=10% Similarity=0.086 Sum_probs=47.5
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCC--ceEEeeecC----
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRP--RWHRVVVQG---- 222 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~--~W~~l~~~g---- 222 (998)
..+.+||+.+.+....-.. +. .-.+++.. ++..++.++.. .......+.+||+.+... .+.......
T Consensus 96 g~i~iwd~~~~~~~~~~~~---~~--~v~~~~~~~~~~~l~~~~~~-~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~ 169 (369)
T 3zwl_B 96 YSIKLWDVSNGQCVATWKS---PV--PVKRVEFSPCGNYFLAILDN-VMKNPGSINIYEIERDSATHELTKVSEEPIHKI 169 (369)
T ss_dssp TEEEEEETTTCCEEEEEEC---SS--CEEEEEECTTSSEEEEEECC-BTTBCCEEEEEEEEECTTTCCEEEECSSCSEEE
T ss_pred CeEEEEECCCCcEEEEeec---CC--CeEEEEEccCCCEEEEecCC-ccCCCCEEEEEEecCCccceeecccccceeeec
Confidence 4688899988765444322 11 11222222 33445555432 111235688888765421 122111000
Q ss_pred -CCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCC
Q 001901 223 -PGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (998)
Q Consensus 223 -~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s 263 (998)
.......-.+++...++.+++.|+.++ .+..||+.+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~ 206 (369)
T 3zwl_B 170 ITHEGLDAATVAGWSTKGKYIIAGHKDG-----KISKYDVSN 206 (369)
T ss_dssp ECCTTCCCEEEEEECGGGCEEEEEETTS-----EEEEEETTT
T ss_pred cCCcCccceeEEEEcCCCCEEEEEcCCC-----EEEEEECCC
Confidence 000000122222333345667776654 688999987
No 147
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=76.89 E-value=90 Score=34.01 Aligned_cols=93 Identities=13% Similarity=0.063 Sum_probs=47.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
..+.++|+.+.+-...-.. ....-.+++.. ++..++.|+. ...+.+||+.+.. ...... ...
T Consensus 145 ~~i~iwd~~~~~~~~~~~~----h~~~v~~~~~~p~~~~l~s~s~------d~~v~iwd~~~~~--~~~~~~-----~~~ 207 (393)
T 1erj_A 145 RLIRIWDIENRKIVMILQG----HEQDIYSLDYFPSGDKLVSGSG------DRTVRIWDLRTGQ--CSLTLS-----IED 207 (393)
T ss_dssp SCEEEEETTTTEEEEEECC----CSSCEEEEEECTTSSEEEEEET------TSEEEEEETTTTE--EEEEEE-----CSS
T ss_pred CeEEEEECCCCcEEEEEcc----CCCCEEEEEEcCCCCEEEEecC------CCcEEEEECCCCe--eEEEEE-----cCC
Confidence 3678889888765433211 11111223332 3345555554 2568899998752 222111 011
Q ss_pred cccEEEEEC-CcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 229 YGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 229 ~~hs~~~~~-~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
.-.+++... ++.+++.|+.++ .+..||+.+.
T Consensus 208 ~v~~~~~~~~~~~~l~~~s~d~-----~v~iwd~~~~ 239 (393)
T 1erj_A 208 GVTTVAVSPGDGKYIAAGSLDR-----AVRVWDSETG 239 (393)
T ss_dssp CEEEEEECSTTCCEEEEEETTS-----CEEEEETTTC
T ss_pred CcEEEEEECCCCCEEEEEcCCC-----cEEEEECCCC
Confidence 112222322 446788887765 5778888776
No 148
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=76.62 E-value=88 Score=38.06 Aligned_cols=188 Identities=7% Similarity=0.032 Sum_probs=96.7
Q ss_pred CcEEEEECCCCcEEEecCCCC-CCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecC---CC
Q 001901 150 ADVHCYDVLTNKWSRITPFGE-PPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG---PG 224 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~-~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g---~~ 224 (998)
.-+++||..+++++.+..... .+. ..-.+.+.. ++.|+|... +.+++||..+. +|....... .+
T Consensus 427 ~Gl~~~d~~~~~~~~~~~~~~~l~~-~~v~~i~~d~~g~lwigt~--------~Gl~~~~~~~~--~~~~~~~~~~~~~~ 495 (795)
T 4a2l_A 427 GGLSILHRNSGQVENFNQRNSQLVN-ENVYAILPDGEGNLWLGTL--------SALVRFNPEQR--SFTTIEKEKDGTPV 495 (795)
T ss_dssp TEEEEEETTTCCEEEECTTTSCCSC-SCEEEEEECSSSCEEEEES--------SCEEEEETTTT--EEEECCBCTTCCBC
T ss_pred CceeEEeCCCCcEEEeecCCCCcCC-CeeEEEEECCCCCEEEEec--------CceeEEeCCCC--eEEEcccccccccc
Confidence 568899999988888764211 111 111222222 346666532 24899998875 477664220 11
Q ss_pred CCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCC-CccceEEEEE-eCCEEEEEeccCC
Q 001901 225 PGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPP-PCMYATASAR-SDGLLLLCGGRDA 302 (998)
Q Consensus 225 P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~-~r~~~~a~~~-~~~~lyvfGG~~~ 302 (998)
+... -.++..-.++.||+... .-+++||+.+. ++ .......... +.....+... .++.||+...
T Consensus 496 ~~~~-i~~i~~d~~g~lWigt~-------~Gl~~~~~~~~--~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~--- 561 (795)
T 4a2l_A 496 VSKQ-ITTLFRDSHKRLWIGGE-------EGLSVFKQEGL--DI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR--- 561 (795)
T ss_dssp CCCC-EEEEEECTTCCEEEEES-------SCEEEEEEETT--EE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES---
T ss_pred CCce-EEEEEECCCCCEEEEeC-------CceEEEeCCCC--eE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC---
Confidence 1111 12222333446777543 24889999888 77 4332101010 1111222222 4678888532
Q ss_pred CCCCcccEEEEecCCCCeEEEEECC-CCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEccc
Q 001901 303 SSVPLASAYGLAKHRDGRWEWAIAP-GVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKS 380 (998)
Q Consensus 303 ~~~~~~dv~~~~~~~~~~W~w~~~~-g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~ 380 (998)
..++.|+.... ++...... +. |... -.+++.- ++.|++.+. +-+..||+++.++.....
T Consensus 562 -----~Gl~~~d~~~~-~~~~~~~~~gl-~~~~-i~~i~~d~~g~lWi~t~-----------~Gl~~~~~~~~~~~~~~~ 622 (795)
T 4a2l_A 562 -----EGFYCFNEKDK-QIKRYNTTNGL-PNNV-VYGILEDSFGRLWLSTN-----------RGISCFNPETEKFRNFTE 622 (795)
T ss_dssp -----SCEEEEETTTT-EEEEECGGGTC-SCSC-EEEEEECTTSCEEEEET-----------TEEEEEETTTTEEEEECG
T ss_pred -----CCceeECCCCC-cEEEeCCCCCC-chhh-eEEEEECCCCCEEEEcC-----------CceEEEcCCCCcEEEcCC
Confidence 13677776544 44433222 22 2222 2233332 467887642 348899999999887654
Q ss_pred C
Q 001901 381 V 381 (998)
Q Consensus 381 ~ 381 (998)
.
T Consensus 623 ~ 623 (795)
T 4a2l_A 623 S 623 (795)
T ss_dssp G
T ss_pred c
Confidence 3
No 149
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=76.44 E-value=1.6 Score=51.65 Aligned_cols=68 Identities=21% Similarity=0.195 Sum_probs=42.1
Q ss_pred CCeEEEecCCCCH-----------------HHHHHHHHHcCCCCCCCCccceeEEEeccccCCCCCh-----HHHHHHHH
Q 001901 698 APIKIFGDLHGQF-----------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS-----LETITLLL 755 (998)
Q Consensus 698 ~~i~vvGDiHG~~-----------------~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s-----~evl~ll~ 755 (998)
.+|+.++|+||.+ ..+..++++......+ .-+|..||++++.+.+ ..++.+|-
T Consensus 30 l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~-----~l~l~~GD~~~gs~~~~~~~~~~~~~~ln 104 (552)
T 2z1a_A 30 LTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKN-----PLFLDAGDVFQGTLYFNQYRGLADRYFMH 104 (552)
T ss_dssp EEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSS-----EEEEECSCCSSSSHHHHHHTTHHHHHHHH
T ss_pred EEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCC-----EEEEeCCCCCCCcHHHHHhCCcHHHHHHH
Confidence 4588999999864 3566666554311111 1467799999976532 34455555
Q ss_pred HhhhcCCCcEEEeecCcccc
Q 001901 756 ALKVEYPNNVHLIRGNHEAA 775 (998)
Q Consensus 756 ~lk~~~p~~v~llrGNHE~~ 775 (998)
.+. + -++..||||..
T Consensus 105 ~lg---~--d~~~lGNHEfd 119 (552)
T 2z1a_A 105 RLR---Y--RAMALGNHEFD 119 (552)
T ss_dssp HTT---C--CEEECCGGGGT
T ss_pred hcC---C--Ccccccccccc
Confidence 542 2 26778999973
No 150
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=76.25 E-value=83 Score=33.31 Aligned_cols=163 Identities=13% Similarity=0.097 Sum_probs=77.0
Q ss_pred CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCccc-EEEEECCcEEEEEcCCCCCCCcccEEEEECC
Q 001901 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGH-VMALVGQRYLMAIGGNDGKRPLADVWALDTA 262 (998)
Q Consensus 184 ~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~h-s~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~ 262 (998)
++..++.|+.+ ..+.+||+......+..+... ......- ++....++.+++.|+.++ .+..+|..
T Consensus 118 ~g~~las~s~D------~~v~iwd~~~~~~~~~~~~~~---~~h~~~v~~v~~~p~~~~l~s~s~D~-----~i~iW~~~ 183 (330)
T 2hes_X 118 DGYYLATCSRD------KSVWIWETDESGEEYECISVL---QEHSQDVKHVIWHPSEALLASSSYDD-----TVRIWKDY 183 (330)
T ss_dssp TSCEEEEEETT------SCEEEEECCTTCCCCEEEEEE---CCCSSCEEEEEECSSSSEEEEEETTS-----CEEEEEEE
T ss_pred CCCEEEEEeCC------CEEEEEeccCCCCCeEEEEEe---ccCCCceEEEEECCCCCEEEEEcCCC-----eEEEEECC
Confidence 34666666642 468899985321134444321 1111111 222223446777787765 46667776
Q ss_pred CCCceEEEcccCCCCCCCccceEEEEEe-C--CEEEEEeccCCCCCCcccEEEEecCC---CCeEEEEECCCCCCCCcce
Q 001901 263 AKPYEWRKLEPEGEGPPPCMYATASARS-D--GLLLLCGGRDASSVPLASAYGLAKHR---DGRWEWAIAPGVSPSPRYQ 336 (998)
Q Consensus 263 s~~~~W~~v~~~~~~P~~r~~~~a~~~~-~--~~lyvfGG~~~~~~~~~dv~~~~~~~---~~~W~w~~~~g~~P~pR~~ 336 (998)
+. .|..+.....- ...-.++... + +..++.|+.++. ..+|.+.... ...|.....-.. .....-
T Consensus 184 ~~--~~~~~~~~~~h---~~~v~~~~~~~~~~~~~l~s~s~D~~----v~iw~~~~~~~~~~~~~~~~~~~~~-~h~~~v 253 (330)
T 2hes_X 184 DD--DWECVAVLNGH---EGTVWSSDFDKTEGVFRLCSGSDDST----VRVWKYMGDDEDDQQEWVCEAILPD-VHKRQV 253 (330)
T ss_dssp TT--EEEEEEEECCC---SSCEEEEEECCSSSSCEEEEEETTSC----EEEEEEEEECTTSCEEEEEEEECCS-CCSSCE
T ss_pred CC--CeeEEEEccCC---CCcEEEEEecCCCCeeEEEEEeCCCe----EEEEEecCCCccccceeEEeeeccc-ccccce
Confidence 66 66655432210 0111122222 2 455666765432 3445543321 113332222110 011222
Q ss_pred eEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcc
Q 001901 337 HAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTK 379 (998)
Q Consensus 337 hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~ 379 (998)
.++++..+.+++.||.++ .+.+||..+.+|..+.
T Consensus 254 ~~v~~s~~~~l~s~~~dg---------~v~iw~~~~~~~~~~~ 287 (330)
T 2hes_X 254 YNVAWGFNGLIASVGADG---------VLAVYEEVDGEWKVFA 287 (330)
T ss_dssp EEEEECTTSCEEEEETTS---------CEEEEEEETTEEEEEE
T ss_pred EEEEEcCCCEEEEEeCCC---------EEEEEEcCCCceEEEe
Confidence 334444555677777533 3778888888886554
No 151
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=76.07 E-value=79 Score=32.97 Aligned_cols=193 Identities=9% Similarity=-0.021 Sum_probs=85.8
Q ss_pred CcEEEEEC-CCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEE--eeecCCCCC
Q 001901 150 ADVHCYDV-LTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHR--VVVQGPGPG 226 (998)
Q Consensus 150 ~dv~~yD~-~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~--l~~~g~~P~ 226 (998)
..+.+||+ .+.....+... +....-.+++...+.+++.|+. ...+.+||+.+....-.. .........
T Consensus 79 g~i~~wd~~~~~~~~~~~~~---~~~~~v~~l~~~~~~~l~s~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 149 (342)
T 1yfq_A 79 GEILKVDLIGSPSFQALTNN---EANLGICRICKYGDDKLIAASW------DGLIEVIDPRNYGDGVIAVKNLNSNNTKV 149 (342)
T ss_dssp SCEEEECSSSSSSEEECBSC---CCCSCEEEEEEETTTEEEEEET------TSEEEEECHHHHTTBCEEEEESCSSSSSS
T ss_pred CeEEEEEeccCCceEecccc---CCCCceEEEEeCCCCEEEEEcC------CCeEEEEcccccccccccccCCeeeEEee
Confidence 36888998 88877666541 0111112223232444555553 246888887651000000 000111222
Q ss_pred CCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCC-CCceEEEcccCCCCCCCccceEEEEE-e-CCEEEEEeccCCC
Q 001901 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA-KPYEWRKLEPEGEGPPPCMYATASAR-S-DGLLLLCGGRDAS 303 (998)
Q Consensus 227 ~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s-~~~~W~~v~~~~~~P~~r~~~~a~~~-~-~~~lyvfGG~~~~ 303 (998)
...-.++....+ . ++.|+.++ .+..||+.+ ............. ....++.. . ++.+++.|+.++
T Consensus 150 ~~~v~~~~~~~~-~-l~~~~~d~-----~i~i~d~~~~~~~~~~~~~~~~~-----~~i~~i~~~~~~~~~l~~~~~dg- 216 (342)
T 1yfq_A 150 KNKIFTMDTNSS-R-LIVGMNNS-----QVQWFRLPLCEDDNGTIEESGLK-----YQIRDVALLPKEQEGYACSSIDG- 216 (342)
T ss_dssp CCCEEEEEECSS-E-EEEEESTT-----EEEEEESSCCTTCCCEEEECSCS-----SCEEEEEECSGGGCEEEEEETTS-
T ss_pred CCceEEEEecCC-c-EEEEeCCC-----eEEEEECCccccccceeeecCCC-----CceeEEEECCCCCCEEEEEecCC-
Confidence 222223333344 4 55565543 688899977 3212222211111 11223333 3 567777777543
Q ss_pred CCCcccEEEEecC-----CCCeEEEEECCCCCC---CCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCe
Q 001901 304 SVPLASAYGLAKH-----RDGRWEWAIAPGVSP---SPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (998)
Q Consensus 304 ~~~~~dv~~~~~~-----~~~~W~w~~~~g~~P---~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~ 374 (998)
...+|.++.. ......+........ ....-.++++. ++++++.|+.+ ..+.+||..+.+
T Consensus 217 ---~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---------g~i~vwd~~~~~ 284 (342)
T 1yfq_A 217 ---RVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSD---------GIISCWNLQTRK 284 (342)
T ss_dssp ---EEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETT---------SCEEEEETTTTE
T ss_pred ---cEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCC---------ceEEEEcCccHh
Confidence 2345555443 122222222111000 00011222332 56777777753 248899998876
Q ss_pred EE
Q 001901 375 WC 376 (998)
Q Consensus 375 W~ 376 (998)
..
T Consensus 285 ~~ 286 (342)
T 1yfq_A 285 KI 286 (342)
T ss_dssp EE
T ss_pred Hh
Confidence 53
No 152
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=75.77 E-value=91 Score=33.48 Aligned_cols=180 Identities=9% Similarity=0.012 Sum_probs=81.1
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCC----
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP---- 225 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P---- 225 (998)
.+.+||........+.... ..-.+++.. ++..++.|+. ...+.+||+.+.. ..........+
T Consensus 131 ~i~i~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~------d~~i~iwd~~~~~--~~~~~~~~~~~~~~~ 197 (425)
T 1r5m_A 131 ELRLWNKTGALLNVLNFHR-----APIVSVKWNKDGTHIISMDV------ENVTILWNVISGT--VMQHFELKETGGSSI 197 (425)
T ss_dssp CEEEEETTSCEEEEECCCC-----SCEEEEEECTTSSEEEEEET------TCCEEEEETTTTE--EEEEECCC-------
T ss_pred eEEEEeCCCCeeeeccCCC-----ccEEEEEECCCCCEEEEEec------CCeEEEEECCCCc--EEEEeeccccCccce
Confidence 5777885544444443221 112223332 3455555553 2468899997752 22211110000
Q ss_pred -------CCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEe
Q 001901 226 -------GPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCG 298 (998)
Q Consensus 226 -------~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfG 298 (998)
....-.++....++ .++.|+.+ ..+..||+.+........... ......+...++.+++.|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----g~i~~~d~~~~~~~~~~~~~~------~~i~~~~~~~~~~~l~~~ 265 (425)
T 1r5m_A 198 NAENHSGDGSLGVDVEWVDDD-KFVIPGPK-----GAIFVYQITEKTPTGKLIGHH------GPISVLEFNDTNKLLLSA 265 (425)
T ss_dssp --------CCCBSCCEEEETT-EEEEECGG-----GCEEEEETTCSSCSEEECCCS------SCEEEEEEETTTTEEEEE
T ss_pred eeccccCCcceeeEEEEcCCC-EEEEEcCC-----CeEEEEEcCCCceeeeeccCC------CceEEEEECCCCCEEEEE
Confidence 00002233334443 56666654 368899998763222221111 112223334466677777
Q ss_pred ccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCeEE
Q 001901 299 GRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (998)
Q Consensus 299 G~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~ 376 (998)
+.++. +..|+.... ....... + ....-.++++. ++ +++.|+.+ ..+.+||+.+.+-.
T Consensus 266 ~~d~~------i~i~d~~~~-~~~~~~~-~---~~~~i~~~~~~~~~-~l~~~~~d---------~~i~i~d~~~~~~~ 323 (425)
T 1r5m_A 266 SDDGT------LRIWHGGNG-NSQNCFY-G---HSQSIVSASWVGDD-KVISCSMD---------GSVRLWSLKQNTLL 323 (425)
T ss_dssp ETTSC------EEEECSSSB-SCSEEEC-C---CSSCEEEEEEETTT-EEEEEETT---------SEEEEEETTTTEEE
T ss_pred cCCCE------EEEEECCCC-ccceEec-C---CCccEEEEEECCCC-EEEEEeCC---------CcEEEEECCCCcEe
Confidence 65432 333333221 1111111 1 11122334444 45 66666642 35899999887643
No 153
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=75.50 E-value=63 Score=33.95 Aligned_cols=98 Identities=13% Similarity=0.197 Sum_probs=51.9
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEE--e-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATA--V-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~--~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~ 226 (998)
..+.+||+.+.+...+... . ..-.+++. . ++.+++.|+.+ ..+.+||+.+..... .+. .
T Consensus 108 g~v~iwd~~~~~~~~~~~~---~--~~v~~~~~~~~~~~~~l~~~~~d------g~i~vwd~~~~~~~~-~~~------~ 169 (368)
T 3mmy_A 108 KTAKMWDLSSNQAIQIAQH---D--APVKTIHWIKAPNYSCVMTGSWD------KTLKFWDTRSSNPMM-VLQ------L 169 (368)
T ss_dssp SEEEEEETTTTEEEEEEEC---S--SCEEEEEEEECSSCEEEEEEETT------SEEEEECSSCSSCSE-EEE------C
T ss_pred CcEEEEEcCCCCceeeccc---c--CceEEEEEEeCCCCCEEEEccCC------CcEEEEECCCCcEEE-EEe------c
Confidence 4688899998876665432 1 11122332 2 34777777652 469999998754222 221 1
Q ss_pred CCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcc
Q 001901 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (998)
Q Consensus 227 ~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~ 272 (998)
.....+.....+ .+++ ++.+ ..+..||+......+..+.
T Consensus 170 ~~~~~~~~~~~~-~~~~-~~~~-----~~i~~~~~~~~~~~~~~~~ 208 (368)
T 3mmy_A 170 PERCYCADVIYP-MAVV-ATAE-----RGLIVYQLENQPSEFRRIE 208 (368)
T ss_dssp SSCEEEEEEETT-EEEE-EEGG-----GCEEEEECSSSCEEEEECC
T ss_pred CCCceEEEecCC-eeEE-EeCC-----CcEEEEEeccccchhhhcc
Confidence 112223333444 3444 3332 3577888876644555554
No 154
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=75.31 E-value=38 Score=36.41 Aligned_cols=94 Identities=19% Similarity=0.227 Sum_probs=48.5
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~ 227 (998)
+.+.+||+.+.+-...... +.+......... ++.+++.|+.+ ..+.+||+.+... -..+. ..
T Consensus 122 ~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~------~~v~~~d~~~~~~-~~~~~------~~ 185 (408)
T 4a11_B 122 KTLKVWDTNTLQTADVFNF---EETVYSHHMSPVSTKHCLVAVGTRG------PKVQLCDLKSGSC-SHILQ------GH 185 (408)
T ss_dssp SEEEEEETTTTEEEEEEEC---SSCEEEEEECSSCSSCCEEEEEESS------SSEEEEESSSSCC-CEEEC------CC
T ss_pred CeEEEeeCCCCccceeccC---CCceeeeEeecCCCCCcEEEEEcCC------CeEEEEeCCCcce-eeeec------CC
Confidence 4688899988765544332 121111111111 22466666642 4699999987531 11121 11
Q ss_pred Ccc-cEEEEECCc-EEEEEcCCCCCCCcccEEEEECCCC
Q 001901 228 RYG-HVMALVGQR-YLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 228 R~~-hs~~~~~~~-~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
... .+++...++ .+++.|+.++ .+..||+.+.
T Consensus 186 ~~~v~~~~~~~~~~~ll~~~~~dg-----~i~i~d~~~~ 219 (408)
T 4a11_B 186 RQEILAVSWSPRYDYILATASADS-----RVKLWDVRRA 219 (408)
T ss_dssp CSCEEEEEECSSCTTEEEEEETTS-----CEEEEETTCS
T ss_pred CCcEEEEEECCCCCcEEEEEcCCC-----cEEEEECCCC
Confidence 111 222233232 4777887665 4778888665
No 155
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=75.28 E-value=17 Score=39.54 Aligned_cols=63 Identities=19% Similarity=0.227 Sum_probs=33.1
Q ss_pred CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEE--CCcEEEEEcCCCCCCCcccEEEEEC
Q 001901 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV--GQRYLMAIGGNDGKRPLADVWALDT 261 (998)
Q Consensus 184 ~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~--~~~~Lyv~GG~~g~~~lndv~~yD~ 261 (998)
++..++.|+.+ ..+.+||+.+.. -...- ......-.++.+ .+..+++.||.++ .+..||+
T Consensus 150 dg~~l~sgs~d------g~v~iwd~~~~~--~~~~~-----~~h~~~v~~v~~s~~~~~~~~s~~~dg-----~v~~wd~ 211 (357)
T 4g56_B 150 DGTQAVSGGKD------FSVKVWDLSQKA--VLKSY-----NAHSSEVNCVAACPGKDTIFLSCGEDG-----RILLWDT 211 (357)
T ss_dssp SSSEEEEEETT------SCEEEEETTTTE--EEEEE-----CCCSSCEEEEEECTTCSSCEEEEETTS-----CEEECCT
T ss_pred CCCEEEEEeCC------CeEEEEECCCCc--EEEEE-----cCCCCCEEEEEEccCCCceeeeeccCC-----ceEEEEC
Confidence 34666666642 458899998752 21111 111111122222 2224777777665 4677888
Q ss_pred CCC
Q 001901 262 AAK 264 (998)
Q Consensus 262 ~s~ 264 (998)
.+.
T Consensus 212 ~~~ 214 (357)
T 4g56_B 212 RKP 214 (357)
T ss_dssp TSS
T ss_pred CCC
Confidence 765
No 156
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=75.19 E-value=39 Score=36.69 Aligned_cols=68 Identities=16% Similarity=0.168 Sum_probs=35.2
Q ss_pred CEEEEEeCCCCCCCCcccEEEEEcCCCCCc---eEEeeecCCCC-CCCcccEEEEECC-cEEEEEcCCCCCCCcccEEEE
Q 001901 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPR---WHRVVVQGPGP-GPRYGHVMALVGQ-RYLMAIGGNDGKRPLADVWAL 259 (998)
Q Consensus 185 ~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~---W~~l~~~g~~P-~~R~~hs~~~~~~-~~Lyv~GG~~g~~~lndv~~y 259 (998)
+.+++.|+.+ ..+.+||+.+.... +..... .... ....-.+++...+ +.+++.|+.++ .+..|
T Consensus 126 ~~~l~s~~~d------g~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----~v~iw 193 (416)
T 2pm9_A 126 DNVLASGGNN------GEIFIWDMNKCTESPSNYTPLTP-GQSMSSVDEVISLAWNQSLAHVFASAGSSN-----FASIW 193 (416)
T ss_dssp TTBEEEECSS------SCEEBCBTTTTSSCTTTCCCBCC-CCSCCSSCCCCEEEECSSCTTEEEEESSSS-----CEEEE
T ss_pred CCEEEEEcCC------CeEEEEECCCCcccccccccccc-ccccCCCCCeeEEEeCCCCCcEEEEEcCCC-----CEEEE
Confidence 5666666642 46889998875200 011110 0111 1111223333333 36778887654 58889
Q ss_pred ECCCC
Q 001901 260 DTAAK 264 (998)
Q Consensus 260 D~~s~ 264 (998)
|+.+.
T Consensus 194 d~~~~ 198 (416)
T 2pm9_A 194 DLKAK 198 (416)
T ss_dssp ETTTT
T ss_pred ECCCC
Confidence 99887
No 157
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=75.04 E-value=98 Score=33.51 Aligned_cols=96 Identities=10% Similarity=-0.000 Sum_probs=48.4
Q ss_pred CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCC
Q 001901 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (998)
Q Consensus 184 ~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s 263 (998)
++..++.|+.+ ..+.+||+.+.. ..... . .....-.+++...++.+++.|+.++ .+..||+.+
T Consensus 108 ~~~~l~~~~~d------g~i~iwd~~~~~----~~~~~-~-~h~~~v~~~~~~~~~~~l~s~s~d~-----~i~iwd~~~ 170 (420)
T 3vl1_A 108 QMRRFILGTTE------GDIKVLDSNFNL----QREID-Q-AHVSEITKLKFFPSGEALISSSQDM-----QLKIWSVKD 170 (420)
T ss_dssp SSCEEEEEETT------SCEEEECTTSCE----EEEET-T-SSSSCEEEEEECTTSSEEEEEETTS-----EEEEEETTT
T ss_pred CCCEEEEEECC------CCEEEEeCCCcc----eeeec-c-cccCccEEEEECCCCCEEEEEeCCC-----eEEEEeCCC
Confidence 45667777642 468999988642 22211 0 1112223333444446777777654 688899876
Q ss_pred CCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCC
Q 001901 264 KPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (998)
Q Consensus 264 ~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~ 302 (998)
....... .... ..........++.+++.|+.++
T Consensus 171 ~~~~~~~-~~h~-----~~v~~~~~~~~~~~l~s~~~d~ 203 (420)
T 3vl1_A 171 GSNPRTL-IGHR-----ATVTDIAIIDRGRNVLSASLDG 203 (420)
T ss_dssp CCCCEEE-ECCS-----SCEEEEEEETTTTEEEEEETTS
T ss_pred CcCceEE-cCCC-----CcEEEEEEcCCCCEEEEEcCCC
Confidence 6322211 1110 1112223334666777777653
No 158
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=75.04 E-value=81 Score=33.99 Aligned_cols=95 Identities=13% Similarity=0.113 Sum_probs=46.6
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~ 227 (998)
..+.++|+.+++-...-.. ..... .+++.. +..+++.|+.+ ..+.+||+.+.. .-..+. ....
T Consensus 149 ~~i~iwd~~~~~~~~~~~~---h~~~V-~~~~~~~~~~~~l~s~s~D------~~v~iwd~~~~~-~~~~~~----~~~~ 213 (344)
T 4gqb_B 149 ICIKVWDLAQQVVLSSYRA---HAAQV-TCVAASPHKDSVFLSCSED------NRILLWDTRCPK-PASQIG----CSAP 213 (344)
T ss_dssp SCEEEEETTTTEEEEEECC---CSSCE-EEEEECSSCTTEEEEEETT------SCEEEEETTSSS-CEEECC--------
T ss_pred CeEEEEECCCCcEEEEEcC---cCCce-EEEEecCCCCCceeeeccc------cccccccccccc-eeeeee----ccee
Confidence 3678889888754322111 01111 112221 23567777642 468899998753 122221 1111
Q ss_pred CcccEEEEE--CCcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 228 RYGHVMALV--GQRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 228 R~~hs~~~~--~~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
.....++.+ .+..+++.|+.++ .+..||+.+.
T Consensus 214 ~~~~~~~~~~p~~~~~l~sg~~dg-----~v~~wd~~~~ 247 (344)
T 4gqb_B 214 GYLPTSLAWHPQQSEVFVFGDENG-----TVSLVDTKST 247 (344)
T ss_dssp CCCEEEEEECSSCTTEEEEEETTS-----EEEEEESCC-
T ss_pred eccceeeeecCCCCcceEEeccCC-----cEEEEECCCC
Confidence 111122222 2346788887664 5778898766
No 159
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=74.90 E-value=13 Score=39.60 Aligned_cols=96 Identities=16% Similarity=0.211 Sum_probs=47.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeC----CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVG----TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~----~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P 225 (998)
..+.+||+.+.+...+...+ ....-.+++... +.+++.|+.+ ..+.+||+.+.......+. +
T Consensus 44 ~~v~iw~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~--~--- 109 (357)
T 3i2n_A 44 GVIQLYEIQHGDLKLLREIE---KAKPIKCGTFGATSLQQRYLATGDFG------GNLHIWNLEAPEMPVYSVK--G--- 109 (357)
T ss_dssp EEEEEEEECSSSEEEEEEEE---ESSCEEEEECTTCCTTTCCEEEEETT------SCEEEECTTSCSSCSEEEC--C---
T ss_pred cEEEEEeCCCCcccceeeec---ccCcEEEEEEcCCCCCCceEEEecCC------CeEEEEeCCCCCccEEEEE--e---
Confidence 36788898887765443221 001112222222 3666666642 4688999887521122221 1
Q ss_pred CCCcccEEEEE------CCcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 226 GPRYGHVMALV------GQRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 226 ~~R~~hs~~~~------~~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
....-.++... .++.+++.|+.++ .+..||+.+.
T Consensus 110 ~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~-----~i~vwd~~~~ 149 (357)
T 3i2n_A 110 HKEIINAIDGIGGLGIGEGAPEIVTGSRDG-----TVKVWDPRQK 149 (357)
T ss_dssp CSSCEEEEEEESGGGCC-CCCEEEEEETTS-----CEEEECTTSC
T ss_pred cccceEEEeeccccccCCCccEEEEEeCCC-----eEEEEeCCCC
Confidence 00111111111 2234667777654 5788888776
No 160
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=74.88 E-value=25 Score=37.91 Aligned_cols=133 Identities=13% Similarity=0.161 Sum_probs=57.0
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
.+.+||+.+..|..+.... .....-..+.+ ++.+++.|+.+ ..+.+||+.+.. .|....... ....
T Consensus 34 ~i~iw~~~~~~~~~~~~~~---~h~~~v~~~~~s~~~~~l~s~s~d------~~v~vwd~~~~~-~~~~~~~~~--~~~~ 101 (377)
T 3dwl_C 34 QVELYEQDGNGWKHARTFS---DHDKIVTCVDWAPKSNRIVTCSQD------RNAYVYEKRPDG-TWKQTLVLL--RLNR 101 (377)
T ss_dssp CBCEEEEETTEEEECCCBC---CCSSCEEEEEECTTTCCEEEEETT------SSEEEC-------CCCCEEECC--CCSS
T ss_pred EEEEEEccCCceEEEEEEe---cCCceEEEEEEeCCCCEEEEEeCC------CeEEEEEcCCCC-ceeeeeEec--ccCC
Confidence 5667888888887776542 11111222222 34666666642 468899987752 133332111 1111
Q ss_pred cccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCC
Q 001901 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (998)
Q Consensus 229 ~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~ 302 (998)
.-.++....++.+++.|+.++ .+..||+.+.. .|..+..... +........+...++.+++.|+.++
T Consensus 102 ~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~-~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~~~~~d~ 168 (377)
T 3dwl_C 102 AATFVRWSPNEDKFAVGSGAR-----VISVCYFEQEN-DWWVSKHLKR-PLRSTILSLDWHPNNVLLAAGCADR 168 (377)
T ss_dssp CEEEEECCTTSSCCEEEESSS-----CEEECCC------CCCCEEECS-SCCSCEEEEEECTTSSEEEEEESSS
T ss_pred ceEEEEECCCCCEEEEEecCC-----eEEEEEECCcc-cceeeeEeec-ccCCCeEEEEEcCCCCEEEEEeCCC
Confidence 122222333445677777654 46677776652 1222211111 0111112222334667777777653
No 161
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=74.16 E-value=86 Score=37.55 Aligned_cols=200 Identities=11% Similarity=0.035 Sum_probs=101.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCC-EEEEEeCCCCC------CCCcccEEEEEcCCCCCceEEeeecC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGT-MVVIQGGIGPA------GLSAEDLHVLDLTQQRPRWHRVVVQG 222 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~-~lyVfGG~~~~------~~~~~dv~~~Dl~t~t~~W~~l~~~g 222 (998)
.+++++|+.+++....... ..+....+.. ++ .||+.--.... .....++|++++.+...+=..+.
T Consensus 155 ~~i~v~dl~tg~~~~~~~~----~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~--- 226 (693)
T 3iuj_A 155 REIHLMDVESKQPLETPLK----DVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVF--- 226 (693)
T ss_dssp EEEEEEETTTCSEEEEEEE----EEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEE---
T ss_pred EEEEEEECCCCCCCccccC----CceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEE---
Confidence 4899999999987665321 1122233344 54 55544322110 12345799999877521112232
Q ss_pred CCCC--CCcccEEEEECCc-EEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEec
Q 001901 223 PGPG--PRYGHVMALVGQR-YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGG 299 (998)
Q Consensus 223 ~~P~--~R~~hs~~~~~~~-~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG 299 (998)
..+. +........-.++ +|++....... .+++|.+|+.+....|..+..... .........++.||+...
T Consensus 227 ~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~--~~~i~~~d~~~~~~~~~~l~~~~~-----~~~~~~~~~g~~l~~~t~ 299 (693)
T 3iuj_A 227 GAIPAQHHRYVGATVTEDDRFLLISAANSTS--GNRLYVKDLSQENAPLLTVQGDLD-----ADVSLVDNKGSTLYLLTN 299 (693)
T ss_dssp SCSGGGCCSEEEEEECTTSCEEEEEEESSSS--CCEEEEEETTSTTCCCEEEECSSS-----SCEEEEEEETTEEEEEEC
T ss_pred ecCCCCCeEEEEEEEcCCCCEEEEEEccCCC--CcEEEEEECCCCCCceEEEeCCCC-----ceEEEEeccCCEEEEEEC
Confidence 1121 2222233333333 44443332221 368999998765335776654321 112224456889998876
Q ss_pred cCCCCCCcccEEEEecCCCC--eEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEE
Q 001901 300 RDASSVPLASAYGLAKHRDG--RWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (998)
Q Consensus 300 ~~~~~~~~~dv~~~~~~~~~--~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~ 377 (998)
.+. ....++.++..... .|+-..... .. .. +....+++|++..-.++ ...++++|+.+.....
T Consensus 300 ~~~---~~~~l~~~d~~~~~~~~~~~l~~~~--~~--~~-~~s~~g~~lv~~~~~~g-------~~~l~~~d~~g~~~~~ 364 (693)
T 3iuj_A 300 RDA---PNRRLVTVDAANPGPAHWRDLIPER--QQ--VL-TVHSGSGYLFAEYMVDA-------TARVEQFDYEGKRVRE 364 (693)
T ss_dssp TTC---TTCEEEEEETTSCCGGGCEEEECCC--SS--CE-EEEEETTEEEEEEEETT-------EEEEEEECTTSCEEEE
T ss_pred CCC---CCCEEEEEeCCCCCccccEEEecCC--CC--EE-EEEEECCEEEEEEEECC-------eeEEEEEECCCCeeEE
Confidence 533 23466777665433 365332221 11 22 55556777766543222 3468999998766555
Q ss_pred cc
Q 001901 378 TK 379 (998)
Q Consensus 378 v~ 379 (998)
+.
T Consensus 365 l~ 366 (693)
T 3iuj_A 365 VA 366 (693)
T ss_dssp EC
T ss_pred ee
Confidence 43
No 162
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=73.72 E-value=1.6e+02 Score=35.22 Aligned_cols=203 Identities=13% Similarity=0.007 Sum_probs=98.6
Q ss_pred cCCcEEEEECCCCcEE--EecCCCCCCCCccceEEEEe-CC-EEEEEeCCCCCCCCcccEEEEEcCC------CCCceEE
Q 001901 148 ATADVHCYDVLTNKWS--RITPFGEPPTPRAAHVATAV-GT-MVVIQGGIGPAGLSAEDLHVLDLTQ------QRPRWHR 217 (998)
Q Consensus 148 ~~~dv~~yD~~t~~W~--~l~~~g~~P~pR~~hsa~~~-~~-~lyVfGG~~~~~~~~~dv~~~Dl~t------~t~~W~~ 217 (998)
....+|++++.+.... .+... ...+....+...- ++ .|++...... ...+++|++|+.+ ...++..
T Consensus 206 ~~~~v~~~~l~t~~~~~~~v~~~--~~~~~~~~~~~~SpDg~~l~~~~~~~~--~~~~~l~~~d~~~~~~~~~~~~~~~~ 281 (710)
T 2xdw_A 206 LHQKLYYHVLGTDQSEDILCAEF--PDEPKWMGGAELSDDGRYVLLSIREGC--DPVNRLWYCDLQQESNGITGILKWVK 281 (710)
T ss_dssp CCCEEEEEETTSCGGGCEEEECC--TTCTTCEEEEEECTTSCEEEEEEECSS--SSCCEEEEEEGGGSSSSSCSSCCCEE
T ss_pred CCCEEEEEECCCCcccceEEecc--CCCCeEEEEEEEcCCCCEEEEEEEccC--CCccEEEEEECcccccccCCccceEE
Confidence 4457999999887632 22121 1112222233333 33 4554443211 1247899999976 3224777
Q ss_pred eeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCc-eEEEcccCCCCCCCccceEEEEEe-CCEEE
Q 001901 218 VVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPY-EWRKLEPEGEGPPPCMYATASARS-DGLLL 295 (998)
Q Consensus 218 l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~-~W~~v~~~~~~P~~r~~~~a~~~~-~~~ly 295 (998)
+... .... .....-.++.||+.+..++ ....++.+|+.+... .|+.+.+... ......+... ++.++
T Consensus 282 l~~~---~~~~--~~~~s~dg~~l~~~s~~~~--~~~~l~~~d~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~lv 350 (710)
T 2xdw_A 282 LIDN---FEGE--YDYVTNEGTVFTFKTNRHS--PNYRLINIDFTDPEESKWKVLVPEHE----KDVLEWVACVRSNFLV 350 (710)
T ss_dssp EECS---SSSC--EEEEEEETTEEEEEECTTC--TTCEEEEEETTSCCGGGCEEEECCCS----SCEEEEEEEETTTEEE
T ss_pred eeCC---CCcE--EEEEeccCCEEEEEECCCC--CCCEEEEEeCCCCCcccceeccCCCC----CCeEEEEEEEcCCEEE
Confidence 7521 1111 1222223347888765433 235799999976521 4877754322 1122223334 77888
Q ss_pred EEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CC-EEEEEcccCCCCCccccCCeEEEEECCCC
Q 001901 296 LCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NA-RLHVSGGALGGGRMVEDSSSVAVLDTAAG 373 (998)
Q Consensus 296 vfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~-~L~V~GG~~~~~~~~~~~~dv~vyD~~t~ 373 (998)
+....++ ...++.++........ .+.. + ...-.+...- ++ .+++.... .. ....+|.||+.+.
T Consensus 351 ~~~~~~g----~~~l~~~~~~~g~~~~--~l~~--~-~~~v~~~~~s~d~~~l~~~~ss-~~-----~P~~i~~~d~~tg 415 (710)
T 2xdw_A 351 LCYLHDV----KNTLQLHDLATGALLK--IFPL--E-VGSVVGYSGQKKDTEIFYQFTS-FL-----SPGIIYHCDLTKE 415 (710)
T ss_dssp EEEEETT----EEEEEEEETTTCCEEE--EECC--C-SSEEEEEECCTTCSEEEEEEEC-SS-----CCCEEEEEETTSS
T ss_pred EEEEECC----EEEEEEEECCCCCEEE--ecCC--C-CceEEEEecCCCCCEEEEEEeC-CC-----CCCEEEEEECCCC
Confidence 7765443 3456777653331122 2221 1 1111111111 33 44443221 11 1456999999887
Q ss_pred e--EEEccc
Q 001901 374 V--WCDTKS 380 (998)
Q Consensus 374 ~--W~~v~~ 380 (998)
+ ++.+..
T Consensus 416 ~~~~~~l~~ 424 (710)
T 2xdw_A 416 ELEPRVFRE 424 (710)
T ss_dssp SCCCEEEEE
T ss_pred ccceEEeee
Confidence 7 665554
No 163
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=73.06 E-value=1.4e+02 Score=35.84 Aligned_cols=132 Identities=12% Similarity=0.103 Sum_probs=72.7
Q ss_pred EEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCC--CCCC---cccEEEEECCcEEEEEcCCCCCCCcc
Q 001901 180 ATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPG--PGPR---YGHVMALVGQRYLMAIGGNDGKRPLA 254 (998)
Q Consensus 180 a~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~--P~~R---~~hs~~~~~~~~Lyv~GG~~g~~~ln 254 (998)
-++.++.||+... ...++.+|..+....|+.-...... +..+ ...+.++.++ .||+.. .+ .
T Consensus 66 P~v~~g~vyv~~~-------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~v~v~~-~d-----g 131 (689)
T 1yiq_A 66 PIVVDGVMYTTGP-------FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKG-KVYVGV-LD-----G 131 (689)
T ss_dssp CEEETTEEEEECG-------GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETT-EEEEEC-TT-----S
T ss_pred CEEECCEEEEEcC-------CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECC-EEEEEc-cC-----C
Confidence 3567889999764 2569999999877779864311100 0000 1122344555 676644 22 4
Q ss_pred cEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCC-eEEEEECC
Q 001901 255 DVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDG-RWEWAIAP 327 (998)
Q Consensus 255 dv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~-~W~w~~~~ 327 (998)
.++.+|..+....|+.-..... ........+.++.++++|+..+..... .-..++.|+..+.. .|++...+
T Consensus 132 ~l~AlDa~TG~~~W~~~~~~~~-~~~~~~~~sP~v~~g~v~vg~~~~~~~-~~g~v~a~D~~tG~~~W~~~~~~ 203 (689)
T 1yiq_A 132 RLEAIDAKTGQRAWSVDTRADH-KRSYTITGAPRVVNGKVVIGNGGAEFG-VRGYVTAYDAETGKEAWRFYTVP 203 (689)
T ss_dssp EEEEEETTTCCEEEEEECCSCT-TSCCBCCSCCEEETTEEEECCBCTTTC-CBCEEEEEETTTCCEEEEEESSC
T ss_pred EEEEEECCCCCEeeeecCcCCC-CCCccccCCcEEECCEEEEEeCCCccC-CCCEEEEEECCCCcEEEEecccC
Confidence 6899999998888987543111 000111223345688887743321111 23467777765432 47765443
No 164
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=73.00 E-value=1.2e+02 Score=33.73 Aligned_cols=155 Identities=12% Similarity=0.011 Sum_probs=72.1
Q ss_pred EEEEEeCCCCCCCCcccEEEEEcC--CCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCC
Q 001901 186 MVVIQGGIGPAGLSAEDLHVLDLT--QQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (998)
Q Consensus 186 ~lyVfGG~~~~~~~~~dv~~~Dl~--t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s 263 (998)
.|++.|+. ...+.+||+. +.. .-..+... ..+..-.+++...++..++.|+.+ ..++.+|+.+
T Consensus 116 ~l~~~~~~------dg~v~iwd~~~~~~~-~~~~~~~~---~~~~~v~~~~~sp~~~~l~~~~~~-----g~v~~~~~~~ 180 (450)
T 2vdu_B 116 RLIACADS------DKSLLVFDVDKTSKN-VLKLRKRF---CFSKRPNAISIAEDDTTVIIADKF-----GDVYSIDINS 180 (450)
T ss_dssp EEEEEEGG------GTEEEEEEECSSSSS-CEEEEEEE---ECSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTS
T ss_pred EEEEEECC------CCeEEEEECcCCCCc-eeeeeecc---cCCCCceEEEEcCCCCEEEEEeCC-----CcEEEEecCC
Confidence 55677764 2468889987 432 12222110 011111233333344566777654 3578888866
Q ss_pred CCceEEEcccCCCCC-CCccceEEEEEeC---CEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEE
Q 001901 264 KPYEWRKLEPEGEGP-PPCMYATASARSD---GLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAA 339 (998)
Q Consensus 264 ~~~~W~~v~~~~~~P-~~r~~~~a~~~~~---~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsa 339 (998)
. ..... ...... ........+...+ +++++.|+.++ .+..|+.... ........+. ..... ++
T Consensus 181 ~--~~~~~-~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~------~i~vwd~~~~-~~~~~~~~~h--~~~v~-~~ 247 (450)
T 2vdu_B 181 I--PEEKF-TQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDE------HIKISHYPQC-FIVDKWLFGH--KHFVS-SI 247 (450)
T ss_dssp C--CCSSC-CCCCSEECSSCEEEEEEEECTTSCEEEEEEETTS------CEEEEEESCT-TCEEEECCCC--SSCEE-EE
T ss_pred c--ccccc-cceeeecccCceEEEEEcCCCCCCcEEEEEcCCC------cEEEEECCCC-ceeeeeecCC--CCceE-EE
Confidence 5 21100 000000 0011122233456 78888888653 2333333322 1122212221 11111 22
Q ss_pred EEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEE
Q 001901 340 VFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (998)
Q Consensus 340 v~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~ 377 (998)
++.++.+++.|+.+ ..|.+||+.+.+...
T Consensus 248 ~~sd~~~l~s~~~d---------~~v~vwd~~~~~~~~ 276 (450)
T 2vdu_B 248 CCGKDYLLLSAGGD---------DKIFAWDWKTGKNLS 276 (450)
T ss_dssp EECSTTEEEEEESS---------SEEEEEETTTCCEEE
T ss_pred EECCCCEEEEEeCC---------CeEEEEECCCCcEee
Confidence 22277777787743 358899998887543
No 165
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=72.94 E-value=98 Score=36.33 Aligned_cols=203 Identities=13% Similarity=0.013 Sum_probs=102.0
Q ss_pred CCcEEEEECCC------CcEEEec-CCCCCCCCccceEEEEeCC-EEEEEeCCCCCCC-CcccEEEEEcC-CCC-CceEE
Q 001901 149 TADVHCYDVLT------NKWSRIT-PFGEPPTPRAAHVATAVGT-MVVIQGGIGPAGL-SAEDLHVLDLT-QQR-PRWHR 217 (998)
Q Consensus 149 ~~dv~~yD~~t------~~W~~l~-~~g~~P~pR~~hsa~~~~~-~lyVfGG~~~~~~-~~~dv~~~Dl~-t~t-~~W~~ 217 (998)
..+++++|+.+ .....+. .. + ......+..-++ .|++......... ...++|++|+. +.. .+...
T Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~l~~~~---~-~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~ 235 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSAVRELSDDA---H-RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRT 235 (662)
T ss_dssp EEEEEEEETTSTTTTCGGGSEESSCSC---S-SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEE
T ss_pred eeEEEEEECCCCccccCCceeEEEecC---C-CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEE
Confidence 35899999988 6766665 32 1 111111111234 4444432221111 13579999998 431 02333
Q ss_pred eeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCC---CCCcc-ceEEEEEeCCE
Q 001901 218 VVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEG---PPPCM-YATASARSDGL 293 (998)
Q Consensus 218 l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~---P~~r~-~~~a~~~~~~~ 293 (998)
+... . ...-.......++++|+.+..++ ...+|.+|+.+. +|..+...... |.-.. ....+...+++
T Consensus 236 l~~~---~-~~~~~~~~~spdg~l~~~~~~~~---~~~l~~~~~~~~--~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~ 306 (662)
T 3azo_A 236 LLGG---P-EEAIAQAEWAPDGSLIVATDRTG---WWNLHRVDPATG--AATQLCRREEEFAGPLWTPGMRWFAPLANGL 306 (662)
T ss_dssp EEEE---T-TBCEEEEEECTTSCEEEEECTTS---SCEEEEECTTTC--CEEESSCCSSBSSCCCCSTTCCSEEECTTSC
T ss_pred eCCC---C-CceEcceEECCCCeEEEEECCCC---CeEEEEEECCCC--ceeecccccccccCccccccCceEeEeCCCE
Confidence 3311 0 11122333333446777666553 247999999887 88887553221 10000 11122223677
Q ss_pred EEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEE-EEECCEEEEEcccCCCCCccccCCeEEEEECCC
Q 001901 294 LLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAA-VFVNARLHVSGGALGGGRMVEDSSSVAVLDTAA 372 (998)
Q Consensus 294 lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsa-v~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t 372 (998)
+++.+.. + ...+|.++.... . ...+... . ....+. ..-++.+++..+... ....+|.+|+.+
T Consensus 307 ~~~~~~~-~----~~~l~~~d~~~~-~--~~~l~~~--~-~~~~~~~s~~~~~~~~~~~~~~------~~~~i~~~d~~~ 369 (662)
T 3azo_A 307 IAVVHGK-G----AAVLGILDPESG-E--LVDAAGP--W-TEWAATLTVSGTRAVGVAASPR------TAYEVVELDTVT 369 (662)
T ss_dssp EEEEEBS-S----SCEEEEEETTTT-E--EEECCSS--C-CEEEEEEEEETTEEEEEEEETT------EEEEEEEEETTT
T ss_pred EEEEEEc-C----ccEEEEEECCCC-c--EEEecCC--C-CeEEEEEecCCCEEEEEEcCCC------CCCEEEEEECCC
Confidence 7776654 2 346777776544 2 3333321 1 112233 344666665544321 135699999999
Q ss_pred CeEEEcccC
Q 001901 373 GVWCDTKSV 381 (998)
Q Consensus 373 ~~W~~v~~~ 381 (998)
.+.+.+...
T Consensus 370 g~~~~l~~~ 378 (662)
T 3azo_A 370 GRARTIGAR 378 (662)
T ss_dssp CCEEEEESC
T ss_pred CceEEeecC
Confidence 988877543
No 166
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=72.87 E-value=1.8 Score=50.63 Aligned_cols=66 Identities=23% Similarity=0.348 Sum_probs=36.9
Q ss_pred CCeEEEecCCCCH------------------HHHHHHHHHcCCCCCCCCccceeEEE-eccccCCCCC-----hHHHHHH
Q 001901 698 APIKIFGDLHGQF------------------GDLMRLFDEYGSPSTAGDIAYIDYLF-LGDYVDRGQH-----SLETITL 753 (998)
Q Consensus 698 ~~i~vvGDiHG~~------------------~dL~~il~~~g~~~~~~~~~~~~~vf-LGDyVDRG~~-----s~evl~l 753 (998)
-.|+.+.|+||++ ..|..+++.......+ .+++ .||.++.... ...++.+
T Consensus 7 l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~------~llldaGD~~~g~~~~~~~~g~~~~~~ 80 (509)
T 3ive_A 7 VTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKA------TWFFDAGDYFTGPYISSLTKGKAIIDI 80 (509)
T ss_dssp EEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSS------EEEEECSCCSSSSHHHHTTTTHHHHHH
T ss_pred EEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCC------eEEEECCCCCCCchhhhhcCChHHHHH
Confidence 4688899999974 3445555544221111 3444 8999984311 1233444
Q ss_pred HHHhhhcCCCcEEEeecCccc
Q 001901 754 LLALKVEYPNNVHLIRGNHEA 774 (998)
Q Consensus 754 l~~lk~~~p~~v~llrGNHE~ 774 (998)
|-.+. --++..||||.
T Consensus 81 ln~lg-----~D~~tlGNHEf 96 (509)
T 3ive_A 81 MNTMP-----FDAVTIGNHEF 96 (509)
T ss_dssp HTTSC-----CSEECCCGGGG
T ss_pred HHhcC-----CcEEeeccccc
Confidence 43332 23556799995
No 167
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=72.76 E-value=13 Score=41.62 Aligned_cols=96 Identities=10% Similarity=0.079 Sum_probs=49.0
Q ss_pred cEEEEECCCCcEEEecC-CCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCC
Q 001901 151 DVHCYDVLTNKWSRITP-FGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~-~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~ 227 (998)
.+.++|+.+.....+.. .+ .. ..=.+++.. ++.+++.|+.+ ..+.+||+.+.. ...+... . ...
T Consensus 143 ~i~lWd~~~~~~~~~~~~~g--H~-~~V~~l~f~p~~~~~l~s~s~D------~~v~iwd~~~~~--~~~~~~~-~-~~~ 209 (435)
T 4e54_B 143 DIMLWNFGIKDKPTFIKGIG--AG-GSITGLKFNPLNTNQFYASSME------GTTRLQDFKGNI--LRVFASS-D-TIN 209 (435)
T ss_dssp CEEEECSSCCSCCEEECCCS--SS-CCCCEEEECSSCTTEEEEECSS------SCEEEEETTSCE--EEEEECC-S-SCS
T ss_pred EEEEEECCCCCceeEEEccC--CC-CCEEEEEEeCCCCCEEEEEeCC------CEEEEeeccCCc--eeEEecc-C-CCC
Confidence 67788887665333221 11 00 111122322 34566666642 458899998752 3333211 1 111
Q ss_pred CcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 228 R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
..-.++....++.+++.|+.++ .+..||+...
T Consensus 210 ~~~~~~~~~~~~~~l~~g~~dg-----~i~~wd~~~~ 241 (435)
T 4e54_B 210 IWFCSLDVSASSRMVVTGDNVG-----NVILLNMDGK 241 (435)
T ss_dssp CCCCCEEEETTTTEEEEECSSS-----BEEEEESSSC
T ss_pred ccEEEEEECCCCCEEEEEeCCC-----cEeeeccCcc
Confidence 2223344445556888888765 5778888654
No 168
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=72.48 E-value=96 Score=37.12 Aligned_cols=132 Identities=12% Similarity=0.118 Sum_probs=73.3
Q ss_pred EEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCC--CCC---CcccEEEEECCcEEEEEcCCCCCCCc
Q 001901 179 VATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPG--PGP---RYGHVMALVGQRYLMAIGGNDGKRPL 253 (998)
Q Consensus 179 sa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~--P~~---R~~hs~~~~~~~~Lyv~GG~~g~~~l 253 (998)
+-++.++.||+.... ..++.+|..+....|+.-...... +.. ....+.++.++ +||+.. .+
T Consensus 61 ~P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~v~~-~d----- 126 (668)
T 1kv9_A 61 TPLFHDGVIYTSMSW-------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGD-KVYVGT-LD----- 126 (668)
T ss_dssp CCEEETTEEEEEEGG-------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBT-EEEEEC-TT-----
T ss_pred CCEEECCEEEEECCC-------CeEEEEECCCChhceEECCCCCccccccccccCCccceEEECC-EEEEEc-CC-----
Confidence 345678899998652 569999998877679874311100 000 01122344555 677643 22
Q ss_pred ccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCC-CeEEEEECC
Q 001901 254 ADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRD-GRWEWAIAP 327 (998)
Q Consensus 254 ndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~-~~W~w~~~~ 327 (998)
..++.||..+....|+.-..... .......+.++.++++|+..+.... .....++.|+..+. -.|++...+
T Consensus 127 g~l~alD~~tG~~~W~~~~~~~~--~~~~~~~~P~v~~~~v~vg~~~~~~-~~~g~v~a~D~~tG~~~W~~~~~~ 198 (668)
T 1kv9_A 127 GRLIALDAKTGKAIWSQQTTDPA--KPYSITGAPRVVKGKVIIGNGGAEY-GVRGFVSAYDADTGKLAWRFYTVP 198 (668)
T ss_dssp SEEEEEETTTCCEEEEEECSCTT--SSCBCCSCCEEETTEEEECCBCTTT-CCBCEEEEEETTTCCEEEEEESSC
T ss_pred CEEEEEECCCCCEeeeeccCCCC--CcceecCCCEEECCEEEEeCCCCCc-CCCCEEEEEECCCCcEEEEecccC
Confidence 46999999998888987542111 1111222334568888774332111 12346777776543 246665443
No 169
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=72.31 E-value=58 Score=35.50 Aligned_cols=93 Identities=17% Similarity=0.129 Sum_probs=47.2
Q ss_pred EEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCC
Q 001901 186 MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKP 265 (998)
Q Consensus 186 ~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~ 265 (998)
.+++.|+.+ ..+.+||+.+.. ....- ........-.+++...++.+++.|+.++ .+..||+.+.
T Consensus 145 ~~l~s~~~d------g~i~iwd~~~~~--~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~- 208 (402)
T 2aq5_A 145 NVLLSAGCD------NVILVWDVGTGA--AVLTL--GPDVHPDTIYSVDWSRDGALICTSCRDK-----RVRVIEPRKG- 208 (402)
T ss_dssp TEEEEEETT------SCEEEEETTTTE--EEEEE--CTTTCCSCEEEEEECTTSSCEEEEETTS-----EEEEEETTTT-
T ss_pred CEEEEEcCC------CEEEEEECCCCC--ccEEE--ecCCCCCceEEEEECCCCCEEEEEecCC-----cEEEEeCCCC-
Confidence 466666642 469999998752 22211 0011112223333333445777777654 6889999887
Q ss_pred ceEEEcc-cCCCCCCCccceEEEEEeCCEEEEEe
Q 001901 266 YEWRKLE-PEGEGPPPCMYATASARSDGLLLLCG 298 (998)
Q Consensus 266 ~~W~~v~-~~~~~P~~r~~~~a~~~~~~~lyvfG 298 (998)
+-...- .... .......+...++++++.|
T Consensus 209 -~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~g 238 (402)
T 2aq5_A 209 -TVVAEKDRPHE---GTRPVHAVFVSEGKILTTG 238 (402)
T ss_dssp -EEEEEEECSSC---SSSCCEEEECSTTEEEEEE
T ss_pred -ceeeeeccCCC---CCcceEEEEcCCCcEEEEe
Confidence 332221 1111 0112233444577877777
No 170
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=72.13 E-value=2.9 Score=49.81 Aligned_cols=68 Identities=16% Similarity=0.110 Sum_probs=41.1
Q ss_pred cCCeEEEecCCCCHH---------------------HHHHHHHHcCCCCCCCCccceeEEEeccccCCCC-----ChHHH
Q 001901 697 KAPIKIFGDLHGQFG---------------------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQ-----HSLET 750 (998)
Q Consensus 697 ~~~i~vvGDiHG~~~---------------------dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~-----~s~ev 750 (998)
+-.|+.+.|+||++. .|..+++........ .-+|..||.++..+ ....+
T Consensus 12 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~-----~l~l~~GD~~~gs~~~~~~~g~~~ 86 (579)
T 3ztv_A 12 ELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKN-----PLVLHAGDAITGTLYFTLFGGSAD 86 (579)
T ss_dssp EEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSS-----EEEEECSCCSCSSHHHHTTTTHHH
T ss_pred EEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCC-----EEEEeCCCCCCCceeeeecCCHHH
Confidence 346888999999853 344455544211111 14667899999653 23445
Q ss_pred HHHHHHhhhcCCCcEEEeecCccc
Q 001901 751 ITLLLALKVEYPNNVHLIRGNHEA 774 (998)
Q Consensus 751 l~ll~~lk~~~p~~v~llrGNHE~ 774 (998)
+.+|-.+.. -++..||||.
T Consensus 87 ~~~ln~lg~-----D~~tlGNHEf 105 (579)
T 3ztv_A 87 AAVMNAGNF-----HYFTLGNHEF 105 (579)
T ss_dssp HHHHHHHTC-----SEEECCSGGG
T ss_pred HHHHHhcCc-----Ceeecccccc
Confidence 555555532 2467899996
No 171
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=71.20 E-value=1.3e+02 Score=33.29 Aligned_cols=63 Identities=16% Similarity=0.167 Sum_probs=35.1
Q ss_pred CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 185 ~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
+.+++.|+.+ ..+.+||+.+.. .......+. .... .+++.. ++.+++.|+.++ .+..||+.+.
T Consensus 210 ~~~l~s~~~d------~~i~vwd~~~~~--~~~~~~~~h--~~~v-~~~~~s-d~~~l~s~~~d~-----~v~vwd~~~~ 272 (450)
T 2vdu_B 210 HQFIITSDRD------EHIKISHYPQCF--IVDKWLFGH--KHFV-SSICCG-KDYLLLSAGGDD-----KIFAWDWKTG 272 (450)
T ss_dssp CEEEEEEETT------SCEEEEEESCTT--CEEEECCCC--SSCE-EEEEEC-STTEEEEEESSS-----EEEEEETTTC
T ss_pred CcEEEEEcCC------CcEEEEECCCCc--eeeeeecCC--CCce-EEEEEC-CCCEEEEEeCCC-----eEEEEECCCC
Confidence 6677777752 469999988753 222111111 1111 222222 445677777553 6888998877
No 172
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=70.00 E-value=99 Score=33.57 Aligned_cols=158 Identities=14% Similarity=0.070 Sum_probs=73.5
Q ss_pred CCEEEEEeCCCCCCCCcccEEEEEcCCCCCce---EEeeecCCCC-CCCcccEEEEECCc-EEEEEcCCCCCCCcccEEE
Q 001901 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRW---HRVVVQGPGP-GPRYGHVMALVGQR-YLMAIGGNDGKRPLADVWA 258 (998)
Q Consensus 184 ~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W---~~l~~~g~~P-~~R~~hs~~~~~~~-~Lyv~GG~~g~~~lndv~~ 258 (998)
++.+++.|+.+ ..+.+||+.+..... ..+. .+. ....-.+++...++ .+++.|+.++ .+..
T Consensus 93 ~~~~l~s~s~d------g~v~vw~~~~~~~~~~~~~~~~---~~~~h~~~v~~~~~~p~~~~~l~s~~~dg-----~i~i 158 (402)
T 2aq5_A 93 NDNVIASGSED------CTVMVWEIPDGGLVLPLREPVI---TLEGHTKRVGIVAWHPTAQNVLLSAGCDN-----VILV 158 (402)
T ss_dssp CTTEEEEEETT------SEEEEEECCTTCCSSCBCSCSE---EEECCSSCEEEEEECSSBTTEEEEEETTS-----CEEE
T ss_pred CCCEEEEEeCC------CeEEEEEccCCCCccccCCceE---EecCCCCeEEEEEECcCCCCEEEEEcCCC-----EEEE
Confidence 44667777642 468899988752100 0010 001 11111223333332 4777777664 5888
Q ss_pred EECCCCCceEEEccc-CCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCccee
Q 001901 259 LDTAAKPYEWRKLEP-EGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQH 337 (998)
Q Consensus 259 yD~~s~~~~W~~v~~-~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~h 337 (998)
||+.+. +....-. ... .......+...++.+++.|+.++ .+..++.... .-......+. ...+...
T Consensus 159 wd~~~~--~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d~------~i~iwd~~~~-~~~~~~~~~~-~~~~~~~ 225 (402)
T 2aq5_A 159 WDVGTG--AAVLTLGPDVH---PDTIYSVDWSRDGALICTSCRDK------RVRVIEPRKG-TVVAEKDRPH-EGTRPVH 225 (402)
T ss_dssp EETTTT--EEEEEECTTTC---CSCEEEEEECTTSSCEEEEETTS------EEEEEETTTT-EEEEEEECSS-CSSSCCE
T ss_pred EECCCC--CccEEEecCCC---CCceEEEEECCCCCEEEEEecCC------cEEEEeCCCC-ceeeeeccCC-CCCcceE
Confidence 999887 5443221 111 01112222233677777777542 3444554433 2222211111 1111222
Q ss_pred EEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCe
Q 001901 338 AAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (998)
Q Consensus 338 sav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~ 374 (998)
.+..-++++++.|..... ...+.+||+.+..
T Consensus 226 ~~~~~~~~~l~~g~~~~~------d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 226 AVFVSEGKILTTGFSRMS------ERQVALWDTKHLE 256 (402)
T ss_dssp EEECSTTEEEEEEECTTC------CEEEEEEETTBCS
T ss_pred EEEcCCCcEEEEeccCCC------CceEEEEcCcccc
Confidence 222336777777632111 3458999987753
No 173
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=69.67 E-value=1.6e+02 Score=33.64 Aligned_cols=48 Identities=8% Similarity=-0.089 Sum_probs=31.2
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCC
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQ 210 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t 210 (998)
..|+||..+++...-.=.| .+. --++....+++|+|-| +..|+||..+
T Consensus 168 ~yw~yd~~~~~~~~~~w~g---i~~-iDAA~~~~g~~YfFkG--------~~y~rfd~~~ 215 (460)
T 1qhu_A 168 RKWFWDLTTGTKKERSWPA---VGN-CTSALRWLGRYYCFQG--------NQFLRFNPVS 215 (460)
T ss_dssp EEEEEETTTTEEEEECCTT---SCC-CSEEEEETTEEEEEET--------TEEEEECTTT
T ss_pred cEEEEecccceeecccCCC---CCc-cchheeeCCceEEEEC--------CEEEEEcCcc
Confidence 6799999887665322111 222 3455555789999988 4688888765
No 174
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=69.02 E-value=2.8 Score=45.01 Aligned_cols=68 Identities=18% Similarity=0.192 Sum_probs=41.2
Q ss_pred cCCeEEEecCCCCH--HHHHHHHHHcCCC-CCCCCccceeEEEeccccCCC-CChHHHHHHHHHhhhcCCCcEEEeecCc
Q 001901 697 KAPIKIFGDLHGQF--GDLMRLFDEYGSP-STAGDIAYIDYLFLGDYVDRG-QHSLETITLLLALKVEYPNNVHLIRGNH 772 (998)
Q Consensus 697 ~~~i~vvGDiHG~~--~dL~~il~~~g~~-~~~~~~~~~~~vfLGDyVDRG-~~s~evl~ll~~lk~~~p~~v~llrGNH 772 (998)
+.+|..+|||||.. ..+...+.++.-. ..+ -+++.||-.--| ..+-.+..+|..+... .+-.|||
T Consensus 4 ~m~ilf~GDv~G~~G~~~l~~~l~~lr~~~~~d------~vi~Ngen~~gG~g~~~~~~~~ln~~G~D-----a~TlGNH 72 (281)
T 1t71_A 4 SIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQAD------LVIVNAENTTHGKGLSLKHYEFLKEAGVN-----YITMGNH 72 (281)
T ss_dssp CCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCS------EEEEECTBTTTTSSCCHHHHHHHHHHTCC-----EEECCTT
T ss_pred eEEEEEECCcCChHHHHHHHHHHHHHHHhcCCC------EEEEcCCCCCCCCCcCHHHHHHHHhcCCC-----EEEEccC
Confidence 46799999999984 3334444433210 011 456666666444 4567788888887532 3455999
Q ss_pred ccc
Q 001901 773 EAA 775 (998)
Q Consensus 773 E~~ 775 (998)
|.-
T Consensus 73 efD 75 (281)
T 1t71_A 73 TWF 75 (281)
T ss_dssp TTC
T ss_pred ccc
Confidence 983
No 175
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=68.76 E-value=85 Score=37.50 Aligned_cols=209 Identities=11% Similarity=0.007 Sum_probs=99.5
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCC-CccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCC
Q 001901 149 TADVHCYDVLTNKWSRITPFGEPPT-PRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (998)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~-pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P 225 (998)
...+|+.+.....|+.+......-. ....-....+ +++.++|.-.. .+....+++++|+.+.. ... ...++
T Consensus 93 ~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~-~G~~~~~i~v~dl~tg~--~~~---~~~~~ 166 (695)
T 2bkl_A 93 KAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKP-NAADEAVLHVIDVDSGE--WSK---VDVIE 166 (695)
T ss_dssp SCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEE-TTCSCCEEEEEETTTCC--BCS---SCCBS
T ss_pred EEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECC-CCCceEEEEEEECCCCC--CcC---CcccC
Confidence 4578888888888887753210000 0011122222 34444443221 12223579999999863 320 11222
Q ss_pred CCCcccEEEEECCcEEEEEcCCCCC--------CCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEE
Q 001901 226 GPRYGHVMALVGQRYLMAIGGNDGK--------RPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLC 297 (998)
Q Consensus 226 ~~R~~hs~~~~~~~~Lyv~GG~~g~--------~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvf 297 (998)
.... ...+...+++.++++..+.. .....+|++++.+....-..+..... .+..........+++.+++
T Consensus 167 ~~~~-~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~--~~~~~~~~~~SpDG~~l~~ 243 (695)
T 2bkl_A 167 GGKY-ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTG--DPTTFLQSDLSRDGKYLFV 243 (695)
T ss_dssp CCTT-CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCC--CTTCEEEEEECTTSCCEEE
T ss_pred cccc-cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCC--CCEEEEEEEECCCCCEEEE
Confidence 2221 23334445456666655432 23567999999876211122221111 1112223334446665555
Q ss_pred eccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCe---
Q 001901 298 GGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV--- 374 (998)
Q Consensus 298 GG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~--- 374 (998)
...+.. ..+++|.++.. ++.|....... . .....+..++.+|+....+. ....++++|+.+..
T Consensus 244 ~~~~~~--~~~~l~~~~~~-~~~~~~l~~~~----~-~~~~~~~~~g~l~~~s~~~~------~~~~l~~~d~~~~~~~~ 309 (695)
T 2bkl_A 244 YILRGW--SENDVYWKRPG-EKDFRLLVKGV----G-AKYEVHAWKDRFYVLTDEGA------PRQRVFEVDPAKPARAS 309 (695)
T ss_dssp EEEETT--TEEEEEEECTT-CSSCEEEEECS----S-CCEEEEEETTEEEEEECTTC------TTCEEEEEBTTBCSGGG
T ss_pred EEeCCC--CceEEEEEcCC-CCceEEeecCC----C-ceEEEEecCCcEEEEECCCC------CCCEEEEEeCCCCCccC
Confidence 543321 24567776433 33454443221 1 11222335666555543221 14579999998765
Q ss_pred EEEccc
Q 001901 375 WCDTKS 380 (998)
Q Consensus 375 W~~v~~ 380 (998)
|+.+-.
T Consensus 310 ~~~l~~ 315 (695)
T 2bkl_A 310 WKEIVP 315 (695)
T ss_dssp CEEEEC
T ss_pred CeEEec
Confidence 877654
No 176
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=68.55 E-value=1.2e+02 Score=31.64 Aligned_cols=92 Identities=11% Similarity=0.082 Sum_probs=46.4
Q ss_pred cEEEEECCCCcEE-EecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 151 DVHCYDVLTNKWS-RITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 151 dv~~yD~~t~~W~-~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
.+.++|+.+.+-. .+... ...-.+++.. ++.+++.|+.+ ..+.+||+.+. |...... ....
T Consensus 78 ~i~vwd~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~l~sgs~D------~~v~lWd~~~~---~~~~~~~---~~h~ 140 (304)
T 2ynn_A 78 RIRVFNYNTGEKVVDFEAH-----PDYIRSIAVHPTKPYVLSGSDD------LTVKLWNWENN---WALEQTF---EGHE 140 (304)
T ss_dssp EEEEEETTTCCEEEEEECC-----SSCEEEEEECSSSSEEEEEETT------SCEEEEEGGGT---TEEEEEE---CCCC
T ss_pred EEEEEECCCCcEEEEEeCC-----CCcEEEEEEcCCCCEEEEECCC------CeEEEEECCCC---cchhhhh---cccC
Confidence 6778888876532 22211 0111222222 34566666642 46889998765 3332211 1111
Q ss_pred cccEEEEEC--CcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 229 YGHVMALVG--QRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 229 ~~hs~~~~~--~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
..-.++.+. +..+++.|+.++ .+..||+.+.
T Consensus 141 ~~v~~v~~~p~~~~~l~sgs~D~-----~v~iwd~~~~ 173 (304)
T 2ynn_A 141 HFVMCVAFNPKDPSTFASGCLDR-----TVKVWSLGQS 173 (304)
T ss_dssp SCEEEEEECTTCTTEEEEEETTS-----EEEEEETTCS
T ss_pred CcEEEEEECCCCCCEEEEEeCCC-----eEEEEECCCC
Confidence 111222332 335778888765 5777888655
No 177
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=68.29 E-value=1.1e+02 Score=31.22 Aligned_cols=91 Identities=8% Similarity=-0.064 Sum_probs=42.7
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCc
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~ 229 (998)
.+.+||+.+..-...... . ...-.+++.. ++.+++.|+.+ ..+.+|++.... ....+. .+.....
T Consensus 40 ~v~vw~~~~~~~~~~~~~---~-~~~v~~~~~~~~~~~l~~~~~d------g~i~~~~~~~~~-~~~~~~---~~~~~~~ 105 (313)
T 3odt_A 40 TVRLWSKDDQWLGTVVYT---G-QGFLNSVCYDSEKELLLFGGKD------TMINGVPLFATS-GEDPLY---TLIGHQG 105 (313)
T ss_dssp EEEEEEESSSEEEEEEEE---C-SSCEEEEEEETTTTEEEEEETT------SCEEEEETTCCT-TSCC-C---EECCCSS
T ss_pred cEEEEECCCCEEEEEeec---C-CccEEEEEECCCCCEEEEecCC------CeEEEEEeeecC-CCCccc---chhhccc
Confidence 678888877654433221 1 1112223333 34566666642 457788876531 111111 1111122
Q ss_pred ccEEEEECCcEEEEEcCCCCCCCcccEEEEEC
Q 001901 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDT 261 (998)
Q Consensus 230 ~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~ 261 (998)
.-..+.+.+ .+++.|+.++ .+..||.
T Consensus 106 ~i~~~~~~~-~~l~~~~~d~-----~i~~~d~ 131 (313)
T 3odt_A 106 NVCSLSFQD-GVVISGSWDK-----TAKVWKE 131 (313)
T ss_dssp CEEEEEEET-TEEEEEETTS-----EEEEEET
T ss_pred CEEEEEecC-CEEEEEeCCC-----CEEEEcC
Confidence 223333444 4667776654 5677773
No 178
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=68.24 E-value=1.3e+02 Score=32.12 Aligned_cols=97 Identities=11% Similarity=0.033 Sum_probs=52.6
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEeC--CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVG--TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~--~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
.+.+||+.+.......... .....-.+++... +.+++.|+.+ ..+.+||+.+. ....+.. ......
T Consensus 97 ~i~iwd~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~--~~~~~~~--~~~~~~ 164 (383)
T 3ei3_B 97 DIILWDYDVQNKTSFIQGM--GPGDAITGMKFNQFNTNQLFVSSIR------GATTLRDFSGS--VIQVFAK--TDSWDY 164 (383)
T ss_dssp CEEEEETTSTTCEEEECCC--STTCBEEEEEEETTEEEEEEEEETT------TEEEEEETTSC--EEEEEEC--CCCSSC
T ss_pred eEEEEeCCCcccceeeecC--CcCCceeEEEeCCCCCCEEEEEeCC------CEEEEEECCCC--ceEEEec--cCCCCC
Confidence 6788999887766554320 0111122333333 3666766642 46889999864 3444431 111112
Q ss_pred cccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 229 ~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
.-.+++...++.+++.|+.++ .+..||+...
T Consensus 165 ~v~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~ 195 (383)
T 3ei3_B 165 WYCCVDVSVSRQMLATGDSTG-----RLLLLGLDGH 195 (383)
T ss_dssp CEEEEEEETTTTEEEEEETTS-----EEEEEETTSC
T ss_pred CeEEEEECCCCCEEEEECCCC-----CEEEEECCCC
Confidence 223344444446777777654 6888998544
No 179
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=67.99 E-value=1.2e+02 Score=31.66 Aligned_cols=110 Identities=6% Similarity=-0.060 Sum_probs=57.6
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
..+++||+.+.++..+... ....-++++.. ++.+|+...... .....+++||..+.. ...+.. ......
T Consensus 66 ~~i~~~d~~~~~~~~~~~~----~~~~~~~i~~~~dg~l~v~~~~~~--~~~~~i~~~d~~~~~--~~~~~~--~~~~~~ 135 (333)
T 2dg1_A 66 GNIFKINPETKEIKRPFVS----HKANPAAIKIHKDGRLFVCYLGDF--KSTGGIFAATENGDN--LQDIIE--DLSTAY 135 (333)
T ss_dssp CEEEEECTTTCCEEEEEEC----SSSSEEEEEECTTSCEEEEECTTS--SSCCEEEEECTTSCS--CEEEEC--SSSSCC
T ss_pred CEEEEEeCCCCcEEEEeeC----CCCCcceEEECCCCcEEEEeCCCC--CCCceEEEEeCCCCE--EEEEEc--cCccCC
Confidence 3689999999888776421 11223344443 447777653221 112479999988763 332221 111122
Q ss_pred cccEEEEECCcEEEEEcCCC-CCCCcccEEEEECCCCCceEEEc
Q 001901 229 YGHVMALVGQRYLMAIGGND-GKRPLADVWALDTAAKPYEWRKL 271 (998)
Q Consensus 229 ~~hs~~~~~~~~Lyv~GG~~-g~~~lndv~~yD~~s~~~~W~~v 271 (998)
.-..++.-.++.+|+..... .......+|+||+.+. +...+
T Consensus 136 ~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~--~~~~~ 177 (333)
T 2dg1_A 136 CIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFR--TVTPI 177 (333)
T ss_dssp CEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSC--CEEEE
T ss_pred cccceEECCCCCEEEEeccccccCCCceEEEEeCCCC--EEEEe
Confidence 22333444455677754321 1122357999998876 44443
No 180
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=66.98 E-value=40 Score=36.31 Aligned_cols=112 Identities=15% Similarity=0.081 Sum_probs=55.8
Q ss_pred cCCcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCC
Q 001901 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (998)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~ 226 (998)
....++.+|+.+.+-..+... ..+..+....- +++.+++............+|++|+.+.. ...+. ....
T Consensus 166 ~~~~l~~~d~~~g~~~~l~~~----~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~---~~~~ 236 (388)
T 3pe7_A 166 PCCRLMRVDLKTGESTVILQE----NQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN--MRKVK---THAE 236 (388)
T ss_dssp CCEEEEEEETTTCCEEEEEEE----SSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC--CEESC---CCCT
T ss_pred CcceEEEEECCCCceEEeecC----CccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc--eEEee---eCCC
Confidence 346899999999887776533 12233333333 34444443332222234689999987652 44443 1111
Q ss_pred CCcccEEEEECCc-EEEEEcCCCCCCCcccEEEEECCCCCceEEEc
Q 001901 227 PRYGHVMALVGQR-YLMAIGGNDGKRPLADVWALDTAAKPYEWRKL 271 (998)
Q Consensus 227 ~R~~hs~~~~~~~-~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v 271 (998)
.......+.-.++ .|++.+...+ .....++.+|+.+. +-+.+
T Consensus 237 ~~~~~~~~~spdg~~l~~~~~~~~-~~~~~l~~~d~~~g--~~~~l 279 (388)
T 3pe7_A 237 GESCTHEFWVPDGSALVYVSYLKG-SPDRFIYSADPETL--ENRQL 279 (388)
T ss_dssp TEEEEEEEECTTSSCEEEEEEETT-CCCEEEEEECTTTC--CEEEE
T ss_pred CcccccceECCCCCEEEEEecCCC-CCcceEEEEecCCC--ceEEE
Confidence 1111122222233 3544332222 11235999999888 54444
No 181
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=66.41 E-value=86 Score=33.79 Aligned_cols=67 Identities=10% Similarity=0.036 Sum_probs=34.9
Q ss_pred CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCC-----CCcccEEEEECC-cEEEEEcCCCCCCCcccEEE
Q 001901 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG-----PRYGHVMALVGQ-RYLMAIGGNDGKRPLADVWA 258 (998)
Q Consensus 185 ~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~-----~R~~hs~~~~~~-~~Lyv~GG~~g~~~lndv~~ 258 (998)
+.+++.|+.+ ..+.+||+.+.. ..... ..+. ...-.+++...+ ..+++.|+.++.. ..+..
T Consensus 178 ~~~l~~~~~d------g~v~iwd~~~~~--~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~--~~i~~ 244 (416)
T 2pm9_A 178 AHVFASAGSS------NFASIWDLKAKK--EVIHL---SYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDND--PSILI 244 (416)
T ss_dssp TTEEEEESSS------SCEEEEETTTTE--EEEEE---CCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSS--CCCCE
T ss_pred CcEEEEEcCC------CCEEEEECCCCC--cceEE---eccccccccCCceEEEEECCCCCCEEEEEECCCCC--ceEEE
Confidence 4677777642 469999998752 22211 1111 111223333333 2577777765421 25677
Q ss_pred EECCCC
Q 001901 259 LDTAAK 264 (998)
Q Consensus 259 yD~~s~ 264 (998)
||+.+.
T Consensus 245 ~d~~~~ 250 (416)
T 2pm9_A 245 WDLRNA 250 (416)
T ss_dssp EETTST
T ss_pred EeCCCC
Confidence 888764
No 182
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=65.86 E-value=1.4e+02 Score=31.59 Aligned_cols=138 Identities=14% Similarity=0.076 Sum_probs=64.9
Q ss_pred ccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCC
Q 001901 201 EDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPP 280 (998)
Q Consensus 201 ~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~ 280 (998)
..+.+||+.+.. -.... .+ ....-.+++...++.+++.|+.++ .+..||+.+. .-...-....
T Consensus 164 ~~i~~wd~~~~~--~~~~~-~~---h~~~v~~~~~~~~~~~l~sg~~d~-----~v~~wd~~~~--~~~~~~~~h~---- 226 (340)
T 1got_B 164 TTCALWDIETGQ--QTTTF-TG---HTGDVMSLSLAPDTRLFVSGACDA-----SAKLWDVREG--MCRQTFTGHE---- 226 (340)
T ss_dssp SCEEEEETTTTE--EEEEE-CC---CSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTC--SEEEEECCCS----
T ss_pred CcEEEEECCCCc--EEEEE-cC---CCCceEEEEECCCCCEEEEEeCCC-----cEEEEECCCC--eeEEEEcCCc----
Confidence 468899998752 21111 11 111122333344446788888765 5778888776 2221111100
Q ss_pred ccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcce-eEEEEE-CCEEEEEcccCCCCCc
Q 001901 281 CMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQ-HAAVFV-NARLHVSGGALGGGRM 358 (998)
Q Consensus 281 r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~-hsav~~-~~~L~V~GG~~~~~~~ 358 (998)
......+...++.+++.|+.++. +..++.... .-...... +..... .++++. ++.+++.|+.+
T Consensus 227 ~~v~~v~~~p~~~~l~s~s~d~~------v~iwd~~~~-~~~~~~~~---~~~~~~v~~~~~s~~g~~l~~g~~d----- 291 (340)
T 1got_B 227 SDINAICFFPNGNAFATGSDDAT------CRLFDLRAD-QELMTYSH---DNIICGITSVSFSKSGRLLLAGYDD----- 291 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTSC------EEEEETTTT-EEEEEECC---TTCCSCEEEEEECTTSSEEEEEETT-----
T ss_pred CCEEEEEEcCCCCEEEEEcCCCc------EEEEECCCC-cEEEEEcc---CCcccceEEEEECCCCCEEEEECCC-----
Confidence 11122223346777788876542 233333322 11111111 111111 222222 56777777653
Q ss_pred cccCCeEEEEECCCCe
Q 001901 359 VEDSSSVAVLDTAAGV 374 (998)
Q Consensus 359 ~~~~~dv~vyD~~t~~ 374 (998)
..+.+||..+.+
T Consensus 292 ----~~i~vwd~~~~~ 303 (340)
T 1got_B 292 ----FNCNVWDALKAD 303 (340)
T ss_dssp ----SEEEEEETTTCC
T ss_pred ----CeEEEEEcccCc
Confidence 348889987654
No 183
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=65.62 E-value=1.3e+02 Score=35.96 Aligned_cols=200 Identities=13% Similarity=0.060 Sum_probs=98.0
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCC-------CCcccEEEEEcCCCCCceEEeeec
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAG-------LSAEDLHVLDLTQQRPRWHRVVVQ 221 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~-------~~~~dv~~~Dl~t~t~~W~~l~~~ 221 (998)
.+++++|+.+++....... +.... .+.+.. +++.++++.....+ ....++|++++.+...+-..+.
T Consensus 147 ~~i~v~dl~tg~~~~~~~~---~~~~~-~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~-- 220 (695)
T 2bkl_A 147 AVLHVIDVDSGEWSKVDVI---EGGKY-ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVH-- 220 (695)
T ss_dssp CEEEEEETTTCCBCSSCCB---SCCTT-CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEE--
T ss_pred EEEEEEECCCCCCcCCccc---Ccccc-cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEE--
Confidence 4899999999876311111 11111 222222 44555555543221 1245699999987531122332
Q ss_pred CCCCC-CCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEecc
Q 001901 222 GPGPG-PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 300 (998)
Q Consensus 222 g~~P~-~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~ 300 (998)
..+. +....+...-.+++.++++..++. ..+++|.+|..+. .|..+..... .....+..++.+|+....
T Consensus 221 -~~~~~~~~~~~~~~SpDG~~l~~~~~~~~-~~~~l~~~~~~~~--~~~~l~~~~~------~~~~~~~~~g~l~~~s~~ 290 (695)
T 2bkl_A 221 -ERTGDPTTFLQSDLSRDGKYLFVYILRGW-SENDVYWKRPGEK--DFRLLVKGVG------AKYEVHAWKDRFYVLTDE 290 (695)
T ss_dssp -CCCCCTTCEEEEEECTTSCCEEEEEEETT-TEEEEEEECTTCS--SCEEEEECSS------CCEEEEEETTEEEEEECT
T ss_pred -ecCCCCEEEEEEEECCCCCEEEEEEeCCC-CceEEEEEcCCCC--ceEEeecCCC------ceEEEEecCCcEEEEECC
Confidence 1121 222333333333344444433321 3468888887666 6777754322 112222246665555433
Q ss_pred CCCCCCcccEEEEecCCCC--eEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEc
Q 001901 301 DASSVPLASAYGLAKHRDG--RWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (998)
Q Consensus 301 ~~~~~~~~dv~~~~~~~~~--~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v 378 (998)
+. ....++.++..... .|....... + ...-..+...++++++....++ ...+|++|+....-..+
T Consensus 291 ~~---~~~~l~~~d~~~~~~~~~~~l~~~~--~-~~~l~~~~~~~~~lv~~~~~dg-------~~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 291 GA---PRQRVFEVDPAKPARASWKEIVPED--S-SASLLSVSIVGGHLSLEYLKDA-------TSEVRVATLKGKPVRTV 357 (695)
T ss_dssp TC---TTCEEEEEBTTBCSGGGCEEEECCC--S-SCEEEEEEEETTEEEEEEEETT-------EEEEEEEETTCCEEEEC
T ss_pred CC---CCCEEEEEeCCCCCccCCeEEecCC--C-CCeEEEEEEECCEEEEEEEECC-------EEEEEEEeCCCCeeEEe
Confidence 21 23456766654332 255443321 1 1222334455888888765543 34589999865544443
No 184
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=64.88 E-value=1.9e+02 Score=33.83 Aligned_cols=158 Identities=13% Similarity=-0.004 Sum_probs=78.7
Q ss_pred ccEEEEEcC--C-CCCceEEeeecCCCC---CCCcccEEEEECCcEEEEEcCCCC-----CCCcccEEEEECCC------
Q 001901 201 EDLHVLDLT--Q-QRPRWHRVVVQGPGP---GPRYGHVMALVGQRYLMAIGGNDG-----KRPLADVWALDTAA------ 263 (998)
Q Consensus 201 ~dv~~~Dl~--t-~t~~W~~l~~~g~~P---~~R~~hs~~~~~~~~Lyv~GG~~g-----~~~lndv~~yD~~s------ 263 (998)
.++|++++. + . +...+. ..+ ........+.-.+++.+++...+. .....+++.+|+.+
T Consensus 102 ~~l~~~~~~~~g~~--~~~~l~---~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 176 (662)
T 3azo_A 102 QRLYAFEPDAPGGA--VPRPLT---PVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADR 176 (662)
T ss_dssp CCEEEECTTSTTCC--CCEECS---CCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCG
T ss_pred CeEEEEcCCCCCCC--CCEecc---CCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccC
Confidence 579999987 2 3 244444 222 111122233333334444444321 12346899999987
Q ss_pred CCceEEEcc-cCCCCCCCccceEEEEEeCCEEEEEeccCCCCC--CcccEEEEecCCCC---eEEEEECCCCCCCCccee
Q 001901 264 KPYEWRKLE-PEGEGPPPCMYATASARSDGLLLLCGGRDASSV--PLASAYGLAKHRDG---RWEWAIAPGVSPSPRYQH 337 (998)
Q Consensus 264 ~~~~W~~v~-~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~--~~~dv~~~~~~~~~---~W~w~~~~g~~P~pR~~h 337 (998)
. ....+. ... ..........+++.+++...+.... ...++|.++...++ ........ ......
T Consensus 177 ~--~~~~l~~~~~-----~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~----~~~~~~ 245 (662)
T 3azo_A 177 S--AVRELSDDAH-----RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG----PEEAIA 245 (662)
T ss_dssp G--GSEESSCSCS-----SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE----TTBCEE
T ss_pred C--ceeEEEecCC-----CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC----CCceEc
Confidence 5 445554 211 1222223345666666555433221 23567777766444 22222111 011122
Q ss_pred EEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcccC
Q 001901 338 AAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (998)
Q Consensus 338 sav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~~ 381 (998)
..++. ++++|+.+..++ ...+|.+|+.+.+|..+...
T Consensus 246 ~~~~spdg~l~~~~~~~~-------~~~l~~~~~~~~~~~~l~~~ 283 (662)
T 3azo_A 246 QAEWAPDGSLIVATDRTG-------WWNLHRVDPATGAATQLCRR 283 (662)
T ss_dssp EEEECTTSCEEEEECTTS-------SCEEEEECTTTCCEEESSCC
T ss_pred ceEECCCCeEEEEECCCC-------CeEEEEEECCCCceeecccc
Confidence 33333 677776665432 24699999999999887654
No 185
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=64.80 E-value=94 Score=36.83 Aligned_cols=132 Identities=11% Similarity=0.094 Sum_probs=71.1
Q ss_pred EEEEeCCEEEEEeCCCCCCCCcccEEEEEc-CCCCCceEEeeecCC--CCCCCc---ccEEEE--ECCcE----EEEEcC
Q 001901 179 VATAVGTMVVIQGGIGPAGLSAEDLHVLDL-TQQRPRWHRVVVQGP--GPGPRY---GHVMAL--VGQRY----LMAIGG 246 (998)
Q Consensus 179 sa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl-~t~t~~W~~l~~~g~--~P~~R~---~hs~~~--~~~~~----Lyv~GG 246 (998)
+-++.++.||+.+.. ...++.||. .+....|+.-..... .+..++ ..+.++ .++ . ||+...
T Consensus 57 tP~v~~g~vyv~~~~------~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g-~~~~rV~v~t~ 129 (599)
T 1w6s_A 57 APLVVDGKMYIHTSF------PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDG-KTPALILKTQL 129 (599)
T ss_dssp CCEEETTEEEEECST------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCS-SSCCEEEEECT
T ss_pred ccEEECCEEEEEeCC------CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCC-cceeEEEEEcC
Confidence 345678899998652 246999999 787667987542110 000111 122333 343 5 666432
Q ss_pred CCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCC-CeEEEEE
Q 001901 247 NDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRD-GRWEWAI 325 (998)
Q Consensus 247 ~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~-~~W~w~~ 325 (998)
+ ..++.+|..+....|+.-..... ......++-++.++++|+..+..... ....++.|+..+. ..|++..
T Consensus 130 -d-----g~l~AlDa~TG~~~W~~~~~~~~--~~~~~~ssP~v~~g~V~vg~~g~e~g-~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 130 -D-----GNVAALNAETGETVWKVENSDIK--VGSTLTIAPYVVKDKVIIGSSGAELG-VRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp -T-----SEEEEEETTTCCEEEEEECCCGG--GTCBCCSCCEEETTEEEECCBCGGGT-CCCEEEEEETTTCCEEEEEES
T ss_pred -C-----CEEEEEECCCCCEEEeecCCCCC--ccceeecCCEEECCEEEEEecccccC-CCCeEEEEECCCCcEEEEEcC
Confidence 2 46999999998888986432110 00111222345688887643321111 1345777776543 2466654
Q ss_pred C
Q 001901 326 A 326 (998)
Q Consensus 326 ~ 326 (998)
.
T Consensus 201 ~ 201 (599)
T 1w6s_A 201 T 201 (599)
T ss_dssp S
T ss_pred C
Confidence 4
No 186
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=64.66 E-value=3e+02 Score=34.97 Aligned_cols=91 Identities=11% Similarity=0.029 Sum_probs=46.7
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
.+.+||..+.+-...-.. . ...-.++.+ ++..++.|+. ...+.+||+.+.. ..... ....
T Consensus 638 ~i~vw~~~~~~~~~~~~~---h--~~~v~~~~~s~~~~~l~s~~~------d~~v~vwd~~~~~--~~~~~-----~~~~ 699 (1249)
T 3sfz_A 638 TLQVFKAETGEKLLDIKA---H--EDEVLCCAFSSDDSYIATCSA------DKKVKIWDSATGK--LVHTY-----DEHS 699 (1249)
T ss_dssp CEEEEETTTCCEEEEECC---C--SSCEEEEEECTTSSEEEEEET------TSEEEEEETTTCC--EEEEE-----ECCS
T ss_pred eEEEEECCCCCEEEEecc---C--CCCEEEEEEecCCCEEEEEeC------CCeEEEEECCCCc--eEEEE-----cCCC
Confidence 678899888764322111 0 111122223 3456666654 2469999998763 22211 1111
Q ss_pred cccEEEEE-C--CcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 229 YGHVMALV-G--QRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 229 ~~hs~~~~-~--~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
..-.++.+ . +..+++.|+.++ .+..||+.+.
T Consensus 700 ~~v~~~~~~~~~~~~~l~sg~~d~-----~v~vwd~~~~ 733 (1249)
T 3sfz_A 700 EQVNCCHFTNKSNHLLLATGSNDF-----FLKLWDLNQK 733 (1249)
T ss_dssp SCEEEEEECSSSSCCEEEEEETTS-----CEEEEETTSS
T ss_pred CcEEEEEEecCCCceEEEEEeCCC-----eEEEEECCCc
Confidence 12222233 2 334666666554 5788898877
No 187
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=64.55 E-value=1.7e+02 Score=32.05 Aligned_cols=63 Identities=13% Similarity=0.110 Sum_probs=34.0
Q ss_pred CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 185 ~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
+..++.|+. ...+.+||+.+.. .-..+. +. ...-.++....++.+++.|+.++ .+..||+.+.
T Consensus 204 ~~~l~s~s~------D~~i~~wd~~~~~-~~~~~~--~h---~~~v~~~~~~~~g~~l~s~s~D~-----~v~vwd~~~~ 266 (410)
T 1vyh_C 204 GDHIVSASR------DKTIKMWEVQTGY-CVKTFT--GH---REWVRMVRPNQDGTLIASCSNDQ-----TVRVWVVATK 266 (410)
T ss_dssp SSEEEEEET------TSEEEEEETTTCC-EEEEEE--CC---SSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTC
T ss_pred CCEEEEEeC------CCeEEEEECCCCc-EEEEEe--CC---CccEEEEEECCCCCEEEEEcCCC-----eEEEEECCCC
Confidence 455666664 2568999998753 111221 11 11111222333446777787765 5677888766
No 188
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=64.42 E-value=1.8e+02 Score=32.25 Aligned_cols=64 Identities=19% Similarity=0.145 Sum_probs=36.8
Q ss_pred CcccEEEEECCcEEEEEcCCC----CCCCcccEEEEE----CCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEec
Q 001901 228 RYGHVMALVGQRYLMAIGGND----GKRPLADVWALD----TAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGG 299 (998)
Q Consensus 228 R~~hs~~~~~~~~Lyv~GG~~----g~~~lndv~~yD----~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG 299 (998)
-..|++++..++.+|.+|-.. +.....+..... +... ...++.. ...|++++..++++|.+|-
T Consensus 233 G~~ht~~l~~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~--~v~~i~~-------G~~hs~alt~~G~v~~wG~ 303 (406)
T 4d9s_A 233 GWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNS--FISQISG-------GWRHTMALTSDGKLYGWGW 303 (406)
T ss_dssp CSSEEEEEETTCCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTS--CEEEEEE-------CSSEEEEEETTSCEEEEEC
T ss_pred CCCcEEEEcCCCCEEEeeCCCCCCCCCCCCcCccccEEecccCCC--CEEEEEe-------cCCEEEEEcCCCeEEEeeC
Confidence 357888888888999999542 222122221111 1111 2333332 2467777788999999984
Q ss_pred c
Q 001901 300 R 300 (998)
Q Consensus 300 ~ 300 (998)
.
T Consensus 304 n 304 (406)
T 4d9s_A 304 N 304 (406)
T ss_dssp C
T ss_pred C
Confidence 3
No 189
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=64.34 E-value=1.3e+02 Score=34.50 Aligned_cols=113 Identities=13% Similarity=0.136 Sum_probs=52.7
Q ss_pred EEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeC-CEEEEEeccCCCCCCcccEEEEecCCCC
Q 001901 241 LMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSD-GLLLLCGGRDASSVPLASAYGLAKHRDG 319 (998)
Q Consensus 241 Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~-~~lyvfGG~~~~~~~~~dv~~~~~~~~~ 319 (998)
+++.|+.++ .+..||+.+. +-...-..... ........+...+ +.+++.|+.++ .+..++....
T Consensus 175 ~l~~~~~d~-----~v~vwd~~~~--~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg------~i~vwd~~~~- 239 (615)
T 1pgu_A 175 RSMTVGDDG-----SVVFYQGPPF--KFSASDRTHHK-QGSFVRDVEFSPDSGEFVITVGSDR------KISCFDGKSG- 239 (615)
T ss_dssp EEEEEETTT-----EEEEEETTTB--EEEEEECSSSC-TTCCEEEEEECSTTCCEEEEEETTC------CEEEEETTTC-
T ss_pred EEEEEeCCC-----cEEEEeCCCc--ceeeeecccCC-CCceEEEEEECCCCCCEEEEEeCCC------eEEEEECCCC-
Confidence 677777654 6788888765 33222111110 0001122223335 67777777543 2444444332
Q ss_pred eEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEE
Q 001901 320 RWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (998)
Q Consensus 320 ~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~ 377 (998)
................-.++.+.++.+++.|+.+ ..+.+||+.+.+...
T Consensus 240 ~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d---------~~i~~wd~~~~~~~~ 288 (615)
T 1pgu_A 240 EFLKYIEDDQEPVQGGIFALSWLDSQKFATVGAD---------ATIRVWDVTTSKCVQ 288 (615)
T ss_dssp CEEEECCBTTBCCCSCEEEEEESSSSEEEEEETT---------SEEEEEETTTTEEEE
T ss_pred CEeEEecccccccCCceEEEEEcCCCEEEEEcCC---------CcEEEEECCCCcEEE
Confidence 2221110100001111122222277777777653 348899998876544
No 190
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=63.77 E-value=1.5e+02 Score=31.11 Aligned_cols=190 Identities=12% Similarity=0.067 Sum_probs=90.2
Q ss_pred cCCcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CC-EEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCC
Q 001901 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GT-MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (998)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~-~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P 225 (998)
....+|++|+.+.+-..+. . ......- ++ .|++...... .....+|++|+.+. +...+... +
T Consensus 41 ~~~~l~~~d~~~~~~~~l~--------~-~~~~~~SpDg~~la~~~~~~~--~~~~~l~~~~~~~g--~~~~l~~~---~ 104 (347)
T 2gop_A 41 YENTIVIENLKNNARRFIE--------N-ATMPRISPDGKKIAFMRANEE--KKVSEIWVADLETL--SSKKILEA---K 104 (347)
T ss_dssp EEEEEEEEETTTCCEEEEE--------S-CEEEEECTTSSEEEEEEEETT--TTEEEEEEEETTTT--EEEEEEEE---S
T ss_pred ccceEEEEeCCCCceEEcc--------c-CCCeEECCCCCEEEEEEeccC--CCcceEEEEECCCC--ceEEEEcC---C
Confidence 4568999999988766661 1 1122222 33 4444332211 12356999998875 35555421 1
Q ss_pred CCCcccEEEEECCcEEEEEcCCC------------------CCC----CcccEEEEECCCCCceE-EEcccCCCCCCCcc
Q 001901 226 GPRYGHVMALVGQRYLMAIGGND------------------GKR----PLADVWALDTAAKPYEW-RKLEPEGEGPPPCM 282 (998)
Q Consensus 226 ~~R~~hs~~~~~~~~Lyv~GG~~------------------g~~----~lndv~~yD~~s~~~~W-~~v~~~~~~P~~r~ 282 (998)
. -.....-.++..++++..+ +.. ....++.+|+.+. +. ..+.. . .
T Consensus 105 ~---~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~--~~~~~l~~-~------~ 172 (347)
T 2gop_A 105 N---IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE--EVIEEFEK-P------R 172 (347)
T ss_dssp E---EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTT--EEEEEEEE-E------T
T ss_pred C---ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCC--eEEeeecC-C------C
Confidence 1 1222222233333333321 111 1357999999887 65 44433 1 1
Q ss_pred ceEEEEEeCCEEEEEeccCCCCC--C-cccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCcc
Q 001901 283 YATASARSDGLLLLCGGRDASSV--P-LASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMV 359 (998)
Q Consensus 283 ~~~a~~~~~~~lyvfGG~~~~~~--~-~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~ 359 (998)
........++ +++.+..+.... . ...+|.++ .+.+...... .......-+++.+++++...... .
T Consensus 173 ~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d---~~~~~~l~~~-------~~~~~~spdg~~l~~~~~~~~~~-~ 240 (347)
T 2gop_A 173 FSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE---DGKEEKMFEK-------VSFYAVDSDGERILLYGKPEKKY-M 240 (347)
T ss_dssp TCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE---TTEEEEEEEE-------ESEEEEEECSSCEEEEECCSSSC-C
T ss_pred cccccCCCCe-EEEEEecccccccccccccEEEeC---CCceEEeccC-------cceeeECCCCCEEEEEEccccCC-c
Confidence 1222334455 555554432211 1 45777777 3444433211 11122244565444444322110 0
Q ss_pred ccCCeEEEEECCCCeEEEcc
Q 001901 360 EDSSSVAVLDTAAGVWCDTK 379 (998)
Q Consensus 360 ~~~~dv~vyD~~t~~W~~v~ 379 (998)
.....+|++| +.++..+.
T Consensus 241 ~~~~~l~~~d--~~~~~~l~ 258 (347)
T 2gop_A 241 SEHNKLYIYD--GKEVMGIL 258 (347)
T ss_dssp CSSCEEEEEC--SSCEEESS
T ss_pred cccceEEEEC--CCceEecc
Confidence 1246799999 66776654
No 191
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=63.11 E-value=3.3 Score=49.02 Aligned_cols=71 Identities=18% Similarity=0.205 Sum_probs=38.4
Q ss_pred CCeEEEecCCCCHH-------------HHHHHHHHcCCCC-CCCCccceeEEEeccccCCCCC-------hHHHHHHHHH
Q 001901 698 APIKIFGDLHGQFG-------------DLMRLFDEYGSPS-TAGDIAYIDYLFLGDYVDRGQH-------SLETITLLLA 756 (998)
Q Consensus 698 ~~i~vvGDiHG~~~-------------dL~~il~~~g~~~-~~~~~~~~~~vfLGDyVDRG~~-------s~evl~ll~~ 756 (998)
..|+.++|+||.+. .+.++...+.-.. ..+ ...-+|..||+++..+. ...++.+|-.
T Consensus 16 l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~--~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~ln~ 93 (557)
T 3c9f_A 16 INFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRN--QDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFIK 93 (557)
T ss_dssp EEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTT--CEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHTT
T ss_pred EEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcC--CCEEEEecCCCCCCccchhhcccCCHHHHHHHHh
Confidence 45888999999752 2444432221000 000 01146779999976432 2234555544
Q ss_pred hhhcCCCcEEEeecCcccc
Q 001901 757 LKVEYPNNVHLIRGNHEAA 775 (998)
Q Consensus 757 lk~~~p~~v~llrGNHE~~ 775 (998)
|. --++..||||.-
T Consensus 94 lg-----~Da~tlGNHEfD 107 (557)
T 3c9f_A 94 QD-----YDLLTIGNHELY 107 (557)
T ss_dssp SC-----CSEECCCGGGSS
T ss_pred cC-----CCEEeecchhcc
Confidence 43 225667999984
No 192
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=62.99 E-value=1.1e+02 Score=36.70 Aligned_cols=203 Identities=13% Similarity=0.062 Sum_probs=98.3
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCC--------CCCcccEEEEEcCCCCCceEEeeec
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPA--------GLSAEDLHVLDLTQQRPRWHRVVVQ 221 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~--------~~~~~dv~~~Dl~t~t~~W~~l~~~ 221 (998)
..++++|+.++++...... ..+. .+.+...++-++++..... ......+|++++.+...+-..+. .
T Consensus 189 ~~i~v~dl~tg~~~~~~~~----~~~~-~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~-~ 262 (741)
T 1yr2_A 189 RTVKFVGVADGKPLADELK----WVKF-SGLAWLGNDALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVF-A 262 (741)
T ss_dssp EEEEEEETTTCCEEEEEEE----EEES-CCCEESTTSEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEE-C
T ss_pred EEEEEEECCCCCCCCccCC----Ccee-ccEEEECCCEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEe-c
Confidence 3699999999987654211 1111 1122222233344333221 11245699999876521112222 1
Q ss_pred CCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCce-EEEcccCCCCCCCccceEEEEEeCCEEEEEecc
Q 001901 222 GPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYE-WRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 300 (998)
Q Consensus 222 g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~-W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~ 300 (998)
....+.+......-.+++.+++...++....+++|.+|+.+.... |..+..... .. ...+...++.||+....
T Consensus 263 -~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~----~~-~~~~~~dg~~l~~~s~~ 336 (741)
T 1yr2_A 263 -TPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK----AQ-WDFVDGVGDQLWFVSGD 336 (741)
T ss_dssp -CTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS----SC-EEEEEEETTEEEEEECT
T ss_pred -cCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC----ce-EEEEeccCCEEEEEECC
Confidence 111222333333334444444443333223578999998764223 666643321 11 12223456777776543
Q ss_pred CCCCCCcccEEEEecCCC-CeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEc
Q 001901 301 DASSVPLASAYGLAKHRD-GRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (998)
Q Consensus 301 ~~~~~~~~dv~~~~~~~~-~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v 378 (998)
+. ....++.++.... ..|....... .. .-..+...++++++....++ ...+|++|+....-..+
T Consensus 337 ~~---~~~~l~~~d~~~~~~~~~~l~~~~--~~--~l~~~~~~~~~lv~~~~~dg-------~~~l~~~~~~g~~~~~l 401 (741)
T 1yr2_A 337 GA---PLKKIVRVDLSGSTPRFDTVVPES--KD--NLESVGIAGNRLFASYIHDA-------KSQVLAFDLDGKPAGAV 401 (741)
T ss_dssp TC---TTCEEEEEECSSSSCEEEEEECCC--SS--EEEEEEEEBTEEEEEEEETT-------EEEEEEEETTSCEEEEC
T ss_pred CC---CCCEEEEEeCCCCccccEEEecCC--CC--eEEEEEEECCEEEEEEEECC-------EEEEEEEeCCCCceeec
Confidence 21 2345777765542 3565443221 11 22234445888887765433 34589999865544443
No 193
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=62.96 E-value=1.6e+02 Score=31.38 Aligned_cols=178 Identities=13% Similarity=0.112 Sum_probs=79.1
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCC-----ceEEeeecCCC
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRP-----RWHRVVVQGPG 224 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~-----~W~~l~~~g~~ 224 (998)
.+.++|..+......... +... -.+++.. ++..++.||.+ ..+.+|++..... .-..+. +
T Consensus 87 ~v~vWd~~~~~~~~~~~~---~~~~-v~~~~~sp~g~~lasg~~d------~~i~v~~~~~~~~~~~~~~~~~~~--~-- 152 (354)
T 2pbi_B 87 KVIVWDSFTTNKEHAVTM---PCTW-VMACAYAPSGCAIACGGLD------NKCSVYPLTFDKNENMAAKKKSVA--M-- 152 (354)
T ss_dssp EEEEEETTTCCEEEEEEC---SSSC-CCEEEECTTSSEEEEESTT------SEEEEEECCCCTTCCSGGGCEEEE--E--
T ss_pred eEEEEECCCCCcceEEec---CCCC-EEEEEECCCCCEEEEeeCC------CCEEEEEEeccccccccccceeee--c--
Confidence 577788777654433222 1111 1222222 34677777753 4577777654210 001111 0
Q ss_pred CCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEe---CCEEEEEeccC
Q 001901 225 PGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS---DGLLLLCGGRD 301 (998)
Q Consensus 225 P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~---~~~lyvfGG~~ 301 (998)
....-.++....++..++.|+.++ .+..+|+.+. +-...-.... ....++.+. ++.+++.|+.+
T Consensus 153 -h~~~v~~~~~~~~~~~l~t~s~D~-----~v~lwd~~~~--~~~~~~~~h~-----~~v~~~~~~~~~~g~~l~sgs~D 219 (354)
T 2pbi_B 153 -HTNYLSACSFTNSDMQILTASGDG-----TCALWDVESG--QLLQSFHGHG-----ADVLCLDLAPSETGNTFVSGGCD 219 (354)
T ss_dssp -CSSCEEEEEECSSSSEEEEEETTS-----EEEEEETTTC--CEEEEEECCS-----SCEEEEEECCCSSCCEEEEEETT
T ss_pred -cCCcEEEEEEeCCCCEEEEEeCCC-----cEEEEeCCCC--eEEEEEcCCC-----CCeEEEEEEeCCCCCEEEEEeCC
Confidence 001111222223334556666553 5778898877 3322111100 111122221 35677778765
Q ss_pred CCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCeE
Q 001901 302 ASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (998)
Q Consensus 302 ~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W 375 (998)
+. +..++.... ...... .+. ...-.++++. ++.+++.|+.++ .+.+||+.+..-
T Consensus 220 g~------v~~wd~~~~-~~~~~~-~~h---~~~v~~v~~~p~~~~l~s~s~D~---------~v~lwd~~~~~~ 274 (354)
T 2pbi_B 220 KK------AMVWDMRSG-QCVQAF-ETH---ESDVNSVRYYPSGDAFASGSDDA---------TCRLYDLRADRE 274 (354)
T ss_dssp SC------EEEEETTTC-CEEEEE-CCC---SSCEEEEEECTTSSEEEEEETTS---------CEEEEETTTTEE
T ss_pred Ce------EEEEECCCC-cEEEEe-cCC---CCCeEEEEEeCCCCEEEEEeCCC---------eEEEEECCCCcE
Confidence 42 333333322 211111 111 1111222332 466778887543 378899887753
No 194
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=62.66 E-value=1.5e+02 Score=30.71 Aligned_cols=177 Identities=13% Similarity=0.067 Sum_probs=78.5
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCc
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~ 229 (998)
.+..++............ .. ......... .+..++.|+.+ ..+.+||+... ..... .......
T Consensus 109 ~i~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~l~s~s~d------~~~~~~d~~~~---~~~~~---~~~~~~~ 172 (340)
T 4aow_A 109 TLRLWDLTTGTTTRRFVG---HT-KDVLSVAFSSDNRQIVSGSRD------KTIKLWNTLGV---CKYTV---QDESHSE 172 (340)
T ss_dssp EEEEEETTTTEEEEEEEC---CS-SCEEEEEECTTSSCEEEEETT------SCEEEECTTSC---EEEEE---CSSSCSS
T ss_pred cceEEeecccceeeeecC---CC-CceeEEEEeecCccceeecCC------CeEEEEEeCCC---ceEEE---EeccccC
Confidence 566777777665544332 11 111122222 33555556542 45778887654 22211 1111111
Q ss_pred ccEEEEE---CCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCC
Q 001901 230 GHVMALV---GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVP 306 (998)
Q Consensus 230 ~hs~~~~---~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~ 306 (998)
.-..+.+ ....+++.|+.++ .+..||+.+. +....-.... ......+...++.+++.|+.++.
T Consensus 173 ~v~~~~~~~~~~~~~~~s~~~d~-----~i~i~d~~~~--~~~~~~~~h~----~~v~~~~~s~~~~~l~s~s~Dg~--- 238 (340)
T 4aow_A 173 WVSCVRFSPNSSNPIIVSCGWDK-----LVKVWNLANC--KLKTNHIGHT----GYLNTVTVSPDGSLCASGGKDGQ--- 238 (340)
T ss_dssp CEEEEEECSCSSSCEEEEEETTS-----CEEEEETTTT--EEEEEECCCS----SCEEEEEECTTSSEEEEEETTCE---
T ss_pred cccceEEccCCCCcEEEEEcCCC-----EEEEEECCCC--ceeeEecCCC----CcEEEEEECCCCCEEEEEeCCCe---
Confidence 1122222 2224566666554 5778899877 4333211111 11112223346777888876532
Q ss_pred cccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeE
Q 001901 307 LASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (998)
Q Consensus 307 ~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W 375 (998)
+..++......-..... ...-.+++...+..++.++.+ ..+.+||.++..-
T Consensus 239 ---i~iwd~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~~~~d---------~~i~iwd~~~~~~ 289 (340)
T 4aow_A 239 ---AMLWDLNEGKHLYTLDG------GDIINALCFSPNRYWLCAATG---------PSIKIWDLEGKII 289 (340)
T ss_dssp ---EEEEETTTTEEEEEEEC------SSCEEEEEECSSSSEEEEEET---------TEEEEEETTTTEE
T ss_pred ---EEEEEeccCceeeeecC------CceEEeeecCCCCceeeccCC---------CEEEEEECCCCeE
Confidence 33333333211111111 111223334444455555542 3488888887653
No 195
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=62.13 E-value=1.3e+02 Score=29.95 Aligned_cols=156 Identities=12% Similarity=0.095 Sum_probs=82.6
Q ss_pred eEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeec---CCCCCCCcccEEEEE-CCcEEEEEcCCCCCCCc
Q 001901 178 HVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ---GPGPGPRYGHVMALV-GQRYLMAIGGNDGKRPL 253 (998)
Q Consensus 178 hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~---g~~P~~R~~hs~~~~-~~~~Lyv~GG~~g~~~l 253 (998)
=+++.+++++|+|=| +-+|+++............+. ..+|.. .. ++... .++++|+|-|
T Consensus 10 DAi~~~~g~~yfFkg--------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~~-ID-Aa~~~~~~~~~yfFkG------- 72 (195)
T 1itv_A 10 DAIAEIGNQLYLFKD--------GKYWRFSEGRGSRPQGPFLIADKWPALPRK-LD-SVFEEPLSKKLFFFSG------- 72 (195)
T ss_dssp SEEEEETTEEEEEET--------TEEEEECCSSSCCCEEEEEHHHHCTTSCSS-CS-EEEECTTTCCEEEEET-------
T ss_pred CEEEEeCCEEEEEEC--------CEEEEEECCccccCCCcEEhhhccCCCCCC-cc-EEEEECCCCeEEEEeC-------
Confidence 345667889999977 357888765420012221111 134432 22 23233 2447999987
Q ss_pred ccEEEEECCCCCceE-EEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEE-----CC
Q 001901 254 ADVWALDTAAKPYEW-RKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAI-----AP 327 (998)
Q Consensus 254 ndv~~yD~~s~~~~W-~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~-----~~ 327 (998)
+..|+|+..+. .- ..+...+.+.....-.+|....++++|+|-| +..|+|+.... +... +.
T Consensus 73 ~~yw~~~~~~~--~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg--------~~ywr~d~~~~---~~~~gyPr~i~ 139 (195)
T 1itv_A 73 RQVWVYTGASV--LGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG--------RRLWRFDVKAQ---MVDPRSASEVD 139 (195)
T ss_dssp TEEEEEETTEE--EEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET--------TEEEEEETTTT---EECGGGCEEHH
T ss_pred CEEEEEcCCcc--CCCEEeeecccCCCccceeEEEEcCCCeEEEEeC--------CEEEEEeCCcc---cccCCCccChh
Confidence 57888886432 21 1233323221122344444445789999966 34677776543 1100 00
Q ss_pred -CCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCe
Q 001901 328 -GVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (998)
Q Consensus 328 -g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~ 374 (998)
.-+-.|..-.++...++.+|.|-| +..|.||..+.+
T Consensus 140 ~~w~Gvp~~idaa~~~~g~~Yffkg-----------~~y~~~~~~~~~ 176 (195)
T 1itv_A 140 RMFPGVPLDTHDVFQFREKAYFCQD-----------RFYWRVSSRSEL 176 (195)
T ss_dssp HHSTTSCSSCSEEEEETTEEEEEET-----------TEEEEEECCTTC
T ss_pred hcCCCCCCCCCEEEEeCCeEEEEeC-----------CEEEEEECCccE
Confidence 000112234456666899999865 347888887665
No 196
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=61.73 E-value=76 Score=36.90 Aligned_cols=131 Identities=15% Similarity=0.150 Sum_probs=64.8
Q ss_pred CCcEEEEECCCCcEEEe-cCCCC-------CCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCce-EEe
Q 001901 149 TADVHCYDVLTNKWSRI-TPFGE-------PPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRW-HRV 218 (998)
Q Consensus 149 ~~dv~~yD~~t~~W~~l-~~~g~-------~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W-~~l 218 (998)
.+.+.++|..+.+-.+. ...+. .|.+|..+.+..- +..+|+.... .+.++++|..+..... ..+
T Consensus 247 ~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~------~g~i~vvd~~~~~~l~~~~i 320 (543)
T 1nir_A 247 PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE------TGKVLLVNYKDIDNLTVTSI 320 (543)
T ss_dssp SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT------TTEEEEEECTTSSSCEEEEE
T ss_pred CCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC------CCeEEEEEecCCCcceeEEe
Confidence 45677888887654332 22111 1233443333333 3455555432 3679999987642111 122
Q ss_pred eecCCCCCCCcccEEEEECCc-EEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEe-CCEEEE
Q 001901 219 VVQGPGPGPRYGHVMALVGQR-YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS-DGLLLL 296 (998)
Q Consensus 219 ~~~g~~P~~R~~hs~~~~~~~-~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~-~~~lyv 296 (998)
+..+.-|.++.-.++ ++|+.+.. .+.+.++|+.+. +-...-..+..|.+.+... .... ++.+|+
T Consensus 321 ------~~~~~~~~~~~spdg~~l~va~~~-----~~~v~v~D~~tg--~l~~~i~~g~~ph~g~g~~-~~~p~~g~~~~ 386 (543)
T 1nir_A 321 ------GAAPFLHDGGWDSSHRYFMTAANN-----SNKVAVIDSKDR--RLSALVDVGKTPHPGRGAN-FVHPKYGPVWS 386 (543)
T ss_dssp ------ECCSSCCCEEECTTSCEEEEEEGG-----GTEEEEEETTTT--EEEEEEECSSSBCCTTCEE-EEETTTEEEEE
T ss_pred ------ccCcCccCceECCCCCEEEEEecC-----CCeEEEEECCCC--eEEEeeccCCCCCCCCCcc-cCCCCCccEEE
Confidence 223444555454443 45554322 257888999988 5444333333343322221 2222 367777
Q ss_pred Eec
Q 001901 297 CGG 299 (998)
Q Consensus 297 fGG 299 (998)
.+.
T Consensus 387 s~~ 389 (543)
T 1nir_A 387 TSH 389 (543)
T ss_dssp EEB
T ss_pred ecc
Confidence 764
No 197
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=61.72 E-value=1.4e+02 Score=30.01 Aligned_cols=177 Identities=11% Similarity=-0.013 Sum_probs=83.3
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
+.+++||..+.....+...+ ...-++++.. ++.+||... ...+++||..+.. ..... .....
T Consensus 46 ~~i~~~~~~~~~~~~~~~~~----~~~p~~i~~~~~g~l~v~~~-------~~~i~~~d~~~~~--~~~~~----~~~~~ 108 (270)
T 1rwi_B 46 GRVVKLATGSTGTTVLPFNG----LYQPQGLAVDGAGTVYVTDF-------NNRVVTLAAGSNN--QTVLP----FDGLN 108 (270)
T ss_dssp CEEEEECC-----EECCCCS----CCSCCCEEECTTCCEEEEET-------TTEEEEECTTCSC--CEECC----CCSCS
T ss_pred CcEEEecCCCcccceEeeCC----cCCcceeEECCCCCEEEEcC-------CCEEEEEeCCCce--Eeeee----cCCcC
Confidence 36777887766554443221 1122344444 347887754 1468999987753 22221 11112
Q ss_pred cccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcc
Q 001901 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (998)
Q Consensus 229 ~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~ 308 (998)
.-+.+++-.++.||+.... .+.+++||..+. .......... ..-...+.-.++++|+.... ..
T Consensus 109 ~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~~~--~~~~~~~~~~----~~p~~i~~~~~g~l~v~~~~------~~ 171 (270)
T 1rwi_B 109 YPEGLAVDTQGAVYVADRG-----NNRVVKLAAGSK--TQTVLPFTGL----NDPDGVAVDNSGNVYVTDTD------NN 171 (270)
T ss_dssp SEEEEEECTTCCEEEEEGG-----GTEEEEECTTCC--SCEECCCCSC----CSCCCEEECTTCCEEEEEGG------GT
T ss_pred CCcceEECCCCCEEEEECC-----CCEEEEEECCCc--eeEeeccccC----CCceeEEEeCCCCEEEEECC------CC
Confidence 2344444445578886432 246888887665 3333221111 01112222336778887542 23
Q ss_pred cEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCe
Q 001901 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (998)
Q Consensus 309 dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~ 374 (998)
.++.|+....... ..... ....-.++++. ++.+||.... .+.+++||+.+..
T Consensus 172 ~i~~~~~~~~~~~---~~~~~--~~~~p~~i~~d~~g~l~v~~~~---------~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 172 RVVKLEAESNNQV---VLPFT--DITAPWGIAVDEAGTVYVTEHN---------TNQVVKLLAGSTT 224 (270)
T ss_dssp EEEEECTTTCCEE---ECCCS--SCCSEEEEEECTTCCEEEEETT---------TSCEEEECTTCSC
T ss_pred EEEEEecCCCceE---eeccc--CCCCceEEEECCCCCEEEEECC---------CCcEEEEcCCCCc
Confidence 4666765544221 11110 10122233343 4578887532 2348899987654
No 198
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=61.53 E-value=4.7 Score=44.53 Aligned_cols=44 Identities=14% Similarity=0.141 Sum_probs=26.5
Q ss_pred cCCeEEEecCCCCHH----------------HHHHHHHHcCCCCCCCCccceeEEEeccccCCCC
Q 001901 697 KAPIKIFGDLHGQFG----------------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQ 745 (998)
Q Consensus 697 ~~~i~vvGDiHG~~~----------------dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~ 745 (998)
+-.|+-+.|+||++. .+..+++...-.... .-+|..||.+..-+
T Consensus 11 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~~-----~llld~GD~~qGs~ 70 (341)
T 3gve_A 11 HLSILATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQNPN-----TLLVDNGDLIQGNP 70 (341)
T ss_dssp EEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHHCSS-----EEEEECSCCSCSSH
T ss_pred EEEEEEEeccCCCccCccccCCCccccCCHHHHHHHHHHHHhcCCC-----EEEEecCccCCCcH
Confidence 346888999999863 344555544211111 14566999997543
No 199
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=61.52 E-value=2.6e+02 Score=33.44 Aligned_cols=151 Identities=13% Similarity=0.075 Sum_probs=77.4
Q ss_pred cccEEEEEcCCCCCc-eEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCC--CCceEEEcccCCC
Q 001901 200 AEDLHVLDLTQQRPR-WHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA--KPYEWRKLEPEGE 276 (998)
Q Consensus 200 ~~dv~~~Dl~t~t~~-W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s--~~~~W~~v~~~~~ 276 (998)
.+++|++|+.+...+ |..+... .... ...+.-.++.||+..-.++ ....++.+|+.+ . .|+.+.+...
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~---~~~~--~~~~~~dg~~l~~~s~~~~--~~~~l~~~d~~~~~~--~~~~l~~~~~ 363 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPD---LKAQ--WDFVDGVGDQLWFVSGDGA--PLKKIVRVDLSGSTP--RFDTVVPESK 363 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECS---SSSC--EEEEEEETTEEEEEECTTC--TTCEEEEEECSSSSC--EEEEEECCCS
T ss_pred cceEEEEECCCCCCcccEEecCC---CCce--EEEEeccCCEEEEEECCCC--CCCEEEEEeCCCCcc--ccEEEecCCC
Confidence 568999998764224 7776521 1111 1222233336777654322 235799999877 5 7988865432
Q ss_pred CCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEE-ECC-EEEEE-cccC
Q 001901 277 GPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVF-VNA-RLHVS-GGAL 353 (998)
Q Consensus 277 ~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~-~~~-~L~V~-GG~~ 353 (998)
.. ...+...++.+++....++ ...+|.++.... ....+.. |....-..... -++ .+++. .+..
T Consensus 364 ----~~-l~~~~~~~~~lv~~~~~dg----~~~l~~~~~~g~---~~~~l~~--~~~~~v~~~~~s~d~~~l~~~~ss~~ 429 (741)
T 1yr2_A 364 ----DN-LESVGIAGNRLFASYIHDA----KSQVLAFDLDGK---PAGAVSL--PGIGSASGLSGRPGDRHAYLSFSSFT 429 (741)
T ss_dssp ----SE-EEEEEEEBTEEEEEEEETT----EEEEEEEETTSC---EEEECBC--SSSCEEEEEECCBTCSCEEEEEEETT
T ss_pred ----Ce-EEEEEEECCEEEEEEEECC----EEEEEEEeCCCC---ceeeccC--CCCeEEEEeecCCCCCEEEEEEcCCC
Confidence 11 2223344788887765443 345676664322 1222221 11111111111 123 33332 2211
Q ss_pred CCCCccccCCeEEEEECCCCeEEEccc
Q 001901 354 GGGRMVEDSSSVAVLDTAAGVWCDTKS 380 (998)
Q Consensus 354 ~~~~~~~~~~dv~vyD~~t~~W~~v~~ 380 (998)
....++.||+.+.+.+.+..
T Consensus 430 -------~P~~i~~~d~~tg~~~~l~~ 449 (741)
T 1yr2_A 430 -------QPATVLALDPATAKTTPWEP 449 (741)
T ss_dssp -------EEEEEEEEETTTTEEEECSC
T ss_pred -------CCCEEEEEECCCCcEEEEec
Confidence 13569999999998776654
No 200
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=61.37 E-value=1.6e+02 Score=30.62 Aligned_cols=104 Identities=17% Similarity=0.113 Sum_probs=49.5
Q ss_pred CcEEEEECCCCcEEEecCCCCCCC--CccceEEEEe-C-CEEEEEeCC--CCCC---CCcccEEEEEcCCCCCceEEeee
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPT--PRAAHVATAV-G-TMVVIQGGI--GPAG---LSAEDLHVLDLTQQRPRWHRVVV 220 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~--pR~~hsa~~~-~-~~lyVfGG~--~~~~---~~~~dv~~~Dl~t~t~~W~~l~~ 220 (998)
..+++||+.+.+.......+..+. ...-+.++.. + ..+|+.+.. .... .....+++||+.+... -..+.
T Consensus 65 ~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~~~~- 142 (349)
T 1jmx_B 65 GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE-AKPVR- 142 (349)
T ss_dssp TEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG-BCCSE-
T ss_pred CcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccc-cceee-
Confidence 478999999887654322211111 1112333333 2 366665421 0000 0125799999886310 00011
Q ss_pred cCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCC
Q 001901 221 QGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKP 265 (998)
Q Consensus 221 ~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~ 265 (998)
..+.++.-++++.-.++++|+.++ ++++||+.+..
T Consensus 143 --~~~~~~~~~~~~~s~dg~l~~~~~--------~i~~~d~~~~~ 177 (349)
T 1jmx_B 143 --TFPMPRQVYLMRAADDGSLYVAGP--------DIYKMDVKTGK 177 (349)
T ss_dssp --EEECCSSCCCEEECTTSCEEEESS--------SEEEECTTTCC
T ss_pred --eccCCCcccceeECCCCcEEEccC--------cEEEEeCCCCc
Confidence 011122334444444446777432 48999998773
No 201
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=61.30 E-value=1.9e+02 Score=31.69 Aligned_cols=147 Identities=14% Similarity=0.108 Sum_probs=72.4
Q ss_pred CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 185 ~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
+..++.|+. ...+.+||+.+.. .+... . .....-.+++...++..++.|+.++ .+..||+.+.
T Consensus 280 ~~~l~~~~~------d~~i~vwd~~~~~----~~~~~-~-~~~~~v~~~~~~~~~~~l~sg~~dg-----~i~vwd~~~~ 342 (464)
T 3v7d_B 280 GNIVVSGSY------DNTLIVWDVAQMK----CLYIL-S-GHTDRIYSTIYDHERKRCISASMDT-----TIRIWDLENG 342 (464)
T ss_dssp TTEEEEEET------TSCEEEEETTTTE----EEEEE-C-CCSSCEEEEEEETTTTEEEEEETTS-----CEEEEETTTT
T ss_pred CCEEEEEeC------CCeEEEEECCCCc----EEEEe-c-CCCCCEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCC
Confidence 344555553 2469999998752 22211 1 1111222333444445777777664 5888999877
Q ss_pred CceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECC
Q 001901 265 PYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNA 344 (998)
Q Consensus 265 ~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~ 344 (998)
+-...-... .....+ +...+..++.|+.++ .+..++.... .-.+.... .......+...++
T Consensus 343 --~~~~~~~~h-----~~~v~~-~~~~~~~l~s~s~dg------~v~vwd~~~~-~~~~~~~~----~~~~~~~~~~~~~ 403 (464)
T 3v7d_B 343 --ELMYTLQGH-----TALVGL-LRLSDKFLVSAAADG------SIRGWDANDY-SRKFSYHH----TNLSAITTFYVSD 403 (464)
T ss_dssp --EEEEEECCC-----SSCEEE-EEECSSEEEEEETTS------EEEEEETTTC-CEEEEEEC----TTCCCEEEEEECS
T ss_pred --cEEEEEeCC-----CCcEEE-EEEcCCEEEEEeCCC------cEEEEECCCC-ceeeeecC----CCCccEEEEEeCC
Confidence 322211111 111222 333466667776543 2333443332 11222111 1122233445567
Q ss_pred EEEEEcccCCCCCccccCCeEEEEECCCCeEEE
Q 001901 345 RLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (998)
Q Consensus 345 ~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~ 377 (998)
.+++.|+ + ..+.+||.++.+-..
T Consensus 404 ~~l~~~~-d---------g~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 404 NILVSGS-E---------NQFNIYNLRSGKLVH 426 (464)
T ss_dssp SEEEEEE-T---------TEEEEEETTTCCEEE
T ss_pred CEEEEec-C---------CeEEEEECCCCcEEe
Confidence 7777776 2 248999999987554
No 202
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=60.33 E-value=1.5e+02 Score=29.93 Aligned_cols=155 Identities=13% Similarity=0.036 Sum_probs=81.6
Q ss_pred EEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeec---CCCCCCCcccEEEEEC-CcEEEEEcCCCCCCCcc
Q 001901 179 VATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ---GPGPGPRYGHVMALVG-QRYLMAIGGNDGKRPLA 254 (998)
Q Consensus 179 sa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~---g~~P~~R~~hs~~~~~-~~~Lyv~GG~~g~~~ln 254 (998)
|++.+.+.+|+|=|. -+|+++.... .+....+. ..+|. ... ++.... ++++|+|-| +
T Consensus 28 Ai~~~~g~~y~Fkg~--------~~wr~~~~~~--~~~p~~I~~~wp~Lp~-~iD-Aa~~~~~~~~iyfFkG-------~ 88 (207)
T 1pex_A 28 AITSLRGETMIFKDR--------FFWRLHPQQV--DAELFLTKSFWPELPN-RID-AAYEHPSHDLIFIFRG-------R 88 (207)
T ss_dssp EEEEETTEEEEEETT--------EEEEECSSSS--CCEEEEHHHHCTTSCS-SCC-EEEEETTTTEEEEEET-------T
T ss_pred EEEeCCCcEEEEECC--------EEEEEeCCCc--CCCceehhHhccCCCC-Ccc-EEEEeccCCcEEEEcc-------C
Confidence 455678899999763 4777765442 23222211 12442 222 233332 458999987 4
Q ss_pred cEEEEECCCCCceE-EEcccCCCCCCCccceEEEEEe-CCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCC--
Q 001901 255 DVWALDTAAKPYEW-RKLEPEGEGPPPCMYATASARS-DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVS-- 330 (998)
Q Consensus 255 dv~~yD~~s~~~~W-~~v~~~~~~P~~r~~~~a~~~~-~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~-- 330 (998)
.+|+|+-.+....+ ..+...+-+..+..-.+|.... ++++|+|-| +..|+|+.... +. .++.+
T Consensus 89 ~~w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG--------~~ywr~d~~~~---~~--d~gyPr~ 155 (207)
T 1pex_A 89 KFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG--------NQVWRYDDTNH---IM--DKDYPRL 155 (207)
T ss_dssp EEEEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET--------TEEEEEETTTT---EE--CSSCCCB
T ss_pred EEEEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeC--------CEEEEEeCcCc---cc--cCCCCcc
Confidence 67888743221011 2333333221122334444433 589999976 35677776543 11 11110
Q ss_pred ------CCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEE
Q 001901 331 ------PSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (998)
Q Consensus 331 ------P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~ 376 (998)
-.+..-.++...++++|.|-| +..|.||..+.+=.
T Consensus 156 i~~~~~Gip~~iDaAf~~~g~~YfFkg-----------~~y~rf~~~~~~v~ 196 (207)
T 1pex_A 156 IEEDFPGIGDKVDAVYEKNGYIYFFNG-----------PIQFEYSIWSNRIV 196 (207)
T ss_dssp HHHHSTTSCSCCSEEEEETTEEEEEET-----------TEEEEEETTTTEEE
T ss_pred HHHcCCCCCCCccEEEEcCCcEEEEEC-----------CEEEEEeCCccEEe
Confidence 112223455566899999965 34889998877643
No 203
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=60.25 E-value=1.5e+02 Score=31.48 Aligned_cols=101 Identities=7% Similarity=0.036 Sum_probs=48.1
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeC--CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecC----
Q 001901 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVG--TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG---- 222 (998)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~--~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g---- 222 (998)
...+.+||+.+..-...-.. ....-.+++... ..+++.|+.+ ..+.+||+.+.......+....
T Consensus 165 ~~~v~~~d~~~~~~~~~~~~----~~~~v~~~~~~~~~~~ll~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~ 234 (408)
T 4a11_B 165 GPKVQLCDLKSGSCSHILQG----HRQEILAVSWSPRYDYILATASAD------SRVKLWDVRRASGCLITLDQHNGKKS 234 (408)
T ss_dssp SSSEEEEESSSSCCCEEECC----CCSCEEEEEECSSCTTEEEEEETT------SCEEEEETTCSSCCSEECCTTTTCSC
T ss_pred CCeEEEEeCCCcceeeeecC----CCCcEEEEEECCCCCcEEEEEcCC------CcEEEEECCCCCcccccccccccccc
Confidence 34788899876542221111 001111222222 2467777642 4588999876432222221100
Q ss_pred -CC----CCCCc-ccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 223 -PG----PGPRY-GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 223 -~~----P~~R~-~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
.. ..... -.+++...++..++.|+.++ .+..||+.+.
T Consensus 235 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~vwd~~~~ 277 (408)
T 4a11_B 235 QAVESANTAHNGKVNGLCFTSDGLHLLTVGTDN-----RMRLWNSSNG 277 (408)
T ss_dssp CCTTTSSCSCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTC
T ss_pred eeeccccccccCceeEEEEcCCCCEEEEecCCC-----eEEEEECCCC
Confidence 00 11111 12233333445677777654 5888998776
No 204
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=59.90 E-value=14 Score=40.35 Aligned_cols=28 Identities=4% Similarity=0.003 Sum_probs=16.3
Q ss_pred CCEEEEEeCCCCCCCCcccEEEEEcCCC
Q 001901 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQ 211 (998)
Q Consensus 184 ~~~lyVfGG~~~~~~~~~dv~~~Dl~t~ 211 (998)
++++++.|+.+........+++|+..+.
T Consensus 53 DG~~las~s~d~~~~wd~~v~~~~~~~~ 80 (357)
T 4g56_B 53 DGALLLAASSLSSRTWGGSIWVFKDPEG 80 (357)
T ss_dssp SSCEEEEEECSSSSSCCEEEEEESSCC-
T ss_pred CCCEEEEEcCCCCccccCeEEEEECCCC
Confidence 4577777775433333456888877653
No 205
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=59.67 E-value=4.7 Score=47.78 Aligned_cols=36 Identities=14% Similarity=-0.026 Sum_probs=23.7
Q ss_pred eEEEeccccCCCCCh-----HHHHHHHHHhhhcCCCcEEEeecCccc
Q 001901 733 DYLFLGDYVDRGQHS-----LETITLLLALKVEYPNNVHLIRGNHEA 774 (998)
Q Consensus 733 ~~vfLGDyVDRG~~s-----~evl~ll~~lk~~~p~~v~llrGNHE~ 774 (998)
-+|+.||++++.+.+ ..++.+|-.|. | .+ +. ||||.
T Consensus 126 Lll~~GD~~~gs~~~~~~~g~~~~~~ln~lg--~--d~-~~-GNHEf 166 (562)
T 2wdc_A 126 LVLDGGDTWTNSGLSLLTRGEAVVRWQNLVG--V--DH-MV-SHWEW 166 (562)
T ss_dssp EEEECSCCSSSSHHHHHHTTHHHHHHHHHHT--C--CE-EC-CSGGG
T ss_pred EEEeCCCCCCcchhhhhhCCHHHHHHHHhhC--C--cE-Ee-cchhc
Confidence 467799999976533 34556665554 2 24 46 99996
No 206
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=59.31 E-value=1.6e+02 Score=29.99 Aligned_cols=189 Identities=7% Similarity=0.080 Sum_probs=90.6
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCC-ccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTP-RAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~p-R~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~ 226 (998)
..+.+||+.......+...+..+.. ..-+++++. ++.+||.+.. ....+++||.... ..... +. +.
T Consensus 51 ~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~-----~~~~i~~~d~~g~---~~~~~--~~-~~ 119 (286)
T 1q7f_A 51 HRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS-----PTHQIQIYNQYGQ---FVRKF--GA-TI 119 (286)
T ss_dssp TEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG-----GGCEEEEECTTSC---EEEEE--CT-TT
T ss_pred CEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC-----CCCEEEEECCCCc---EEEEe--cC-cc
Confidence 3678888875544444332211111 122444443 4588888642 1246889995443 22211 11 11
Q ss_pred CCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCC
Q 001901 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVP 306 (998)
Q Consensus 227 ~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~ 306 (998)
...-+.+++-.++.+|+....+ +.+++||.... ....+...... ..-...++-.++.+|+....
T Consensus 120 ~~~~~~i~~~~~g~l~v~~~~~-----~~i~~~~~~g~--~~~~~~~~~~~---~~p~~i~~~~~g~l~v~~~~------ 183 (286)
T 1q7f_A 120 LQHPRGVTVDNKGRIIVVECKV-----MRVIIFDQNGN--VLHKFGCSKHL---EFPNGVVVNDKQEIFISDNR------ 183 (286)
T ss_dssp CSCEEEEEECTTSCEEEEETTT-----TEEEEECTTSC--EEEEEECTTTC---SSEEEEEECSSSEEEEEEGG------
T ss_pred CCCceEEEEeCCCCEEEEECCC-----CEEEEEcCCCC--EEEEeCCCCcc---CCcEEEEECCCCCEEEEECC------
Confidence 1222445444455788875432 46889997655 33333211110 11122233346788887542
Q ss_pred cccEEEEecCCCCeEEEEECC-CCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEc
Q 001901 307 LASAYGLAKHRDGRWEWAIAP-GVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (998)
Q Consensus 307 ~~dv~~~~~~~~~~W~w~~~~-g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v 378 (998)
...++.|+... ........ +.. ..-.++++. ++.+||....+. ..|.+||+....-..+
T Consensus 184 ~~~i~~~~~~g--~~~~~~~~~g~~---~~p~~i~~d~~G~l~v~~~~~~--------~~i~~~~~~g~~~~~~ 244 (286)
T 1q7f_A 184 AHCVKVFNYEG--QYLRQIGGEGIT---NYPIGVGINSNGEILIADNHNN--------FNLTIFTQDGQLISAL 244 (286)
T ss_dssp GTEEEEEETTC--CEEEEESCTTTS---CSEEEEEECTTCCEEEEECSSS--------CEEEEECTTSCEEEEE
T ss_pred CCEEEEEcCCC--CEEEEEccCCcc---CCCcEEEECCCCCEEEEeCCCC--------EEEEEECCCCCEEEEE
Confidence 23566676533 22222211 110 112233333 568888764211 1589999765543333
No 207
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=59.27 E-value=2.4e+02 Score=35.94 Aligned_cols=93 Identities=16% Similarity=0.134 Sum_probs=46.9
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-C--C-EEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-G--T-MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~--~-~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P 225 (998)
+.+.++|+.+.+....-.. . ...-.++.+ . + .+++.|+. ...+.+||+.+.. ..... .+
T Consensus 679 ~~v~vwd~~~~~~~~~~~~---~--~~~v~~~~~~~~~~~~~l~sg~~------d~~v~vwd~~~~~--~~~~~-~~--- 741 (1249)
T 3sfz_A 679 KKVKIWDSATGKLVHTYDE---H--SEQVNCCHFTNKSNHLLLATGSN------DFFLKLWDLNQKE--CRNTM-FG--- 741 (1249)
T ss_dssp SEEEEEETTTCCEEEEEEC---C--SSCEEEEEECSSSSCCEEEEEET------TSCEEEEETTSSS--EEEEE-CC---
T ss_pred CeEEEEECCCCceEEEEcC---C--CCcEEEEEEecCCCceEEEEEeC------CCeEEEEECCCcc--hhhee-cC---
Confidence 4688899988764433211 1 111122222 2 3 45555654 2458999998753 22111 11
Q ss_pred CCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 226 GPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 226 ~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
....-.+++...++.+++.|+.++ .+..||+.+.
T Consensus 742 h~~~v~~~~~sp~~~~l~s~s~dg-----~v~vwd~~~~ 775 (1249)
T 3sfz_A 742 HTNSVNHCRFSPDDELLASCSADG-----TLRLWDVRSA 775 (1249)
T ss_dssp CSSCEEEEEECSSTTEEEEEESSS-----EEEEEEGGGT
T ss_pred CCCCEEEEEEecCCCEEEEEECCC-----eEEEEeCCCC
Confidence 111112233333445777777654 5777888765
No 208
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=58.27 E-value=1.7e+02 Score=30.02 Aligned_cols=187 Identities=10% Similarity=-0.031 Sum_probs=90.2
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeec-CCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ-GPGPGP 227 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~-g~~P~~ 227 (998)
+.+++||+.+. .+.+... . ..-++++.. ++.+|+.... ...+++||+.+.. ...+... ...+..
T Consensus 50 ~~i~~~~~~~~-~~~~~~~----~-~~~~~l~~~~dg~l~v~~~~------~~~i~~~d~~~g~--~~~~~~~~~~~~~~ 115 (296)
T 3e5z_A 50 NRTWAWSDDGQ-LSPEMHP----S-HHQNGHCLNKQGHLIACSHG------LRRLERQREPGGE--WESIADSFEGKKLN 115 (296)
T ss_dssp TEEEEEETTSC-EEEEESS----C-SSEEEEEECTTCCEEEEETT------TTEEEEECSTTCC--EEEEECEETTEECC
T ss_pred CEEEEEECCCC-eEEEECC----C-CCcceeeECCCCcEEEEecC------CCeEEEEcCCCCc--EEEEeeccCCCCCC
Confidence 47899999988 6665432 1 112334443 3477766431 2468999986653 5444311 111111
Q ss_pred CcccEEEEECCcEEEEE----cCCC------C--CCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEE
Q 001901 228 RYGHVMALVGQRYLMAI----GGND------G--KRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLL 295 (998)
Q Consensus 228 R~~hs~~~~~~~~Lyv~----GG~~------g--~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~ly 295 (998)
+. ..+++-.++.||+. |..+ . ......+|+||+. . +...+..... .-...+...+++++
T Consensus 116 ~~-~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g--~~~~~~~~~~-----~~~gi~~s~dg~~l 186 (296)
T 3e5z_A 116 SP-NDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G--TLSAPIRDRV-----KPNGLAFLPSGNLL 186 (296)
T ss_dssp CC-CCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S--CEEEEECCCS-----SEEEEEECTTSCEE
T ss_pred CC-CCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-C--CEEEeecCCC-----CCccEEECCCCCEE
Confidence 11 23444445578885 4311 0 1113479999987 4 4444322211 11222233356666
Q ss_pred EEeccCCCCCCcccEEEEecCCCCeE-EEEEC-CCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCC
Q 001901 296 LCGGRDASSVPLASAYGLAKHRDGRW-EWAIA-PGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAA 372 (998)
Q Consensus 296 vfGG~~~~~~~~~dv~~~~~~~~~~W-~w~~~-~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t 372 (998)
+.... ...++.|+...++.. .-... ......+ .++++- +++|||..+ +.|.+||+..
T Consensus 187 v~~~~------~~~i~~~~~~~~g~~~~~~~~~~~~~~~p---~~i~~d~~G~l~v~~~-----------~~v~~~~~~g 246 (296)
T 3e5z_A 187 VSDTG------DNATHRYCLNARGETEYQGVHFTVEPGKT---DGLRVDAGGLIWASAG-----------DGVHVLTPDG 246 (296)
T ss_dssp EEETT------TTEEEEEEECSSSCEEEEEEEECCSSSCC---CSEEEBTTSCEEEEET-----------TEEEEECTTS
T ss_pred EEeCC------CCeEEEEEECCCCcCcCCCeEeeCCCCCC---CeEEECCCCCEEEEcC-----------CeEEEECCCC
Confidence 44322 235666665544444 11111 1110111 123333 578888751 3489999986
Q ss_pred CeEEEcc
Q 001901 373 GVWCDTK 379 (998)
Q Consensus 373 ~~W~~v~ 379 (998)
.....+.
T Consensus 247 ~~~~~~~ 253 (296)
T 3e5z_A 247 DELGRVL 253 (296)
T ss_dssp CEEEEEE
T ss_pred CEEEEEE
Confidence 5544443
No 209
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=58.20 E-value=6.4 Score=43.42 Aligned_cols=43 Identities=16% Similarity=0.120 Sum_probs=26.0
Q ss_pred cCCeEEEecCCCCHH----------------HHHHHHHHcCCCCCCCCccceeEEEeccccCCC
Q 001901 697 KAPIKIFGDLHGQFG----------------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRG 744 (998)
Q Consensus 697 ~~~i~vvGDiHG~~~----------------dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG 744 (998)
+-.|+-..|+||++. .+..++++..-.... .-+|..||.+..-
T Consensus 8 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~n-----~llld~GD~~qGs 66 (339)
T 3jyf_A 8 DLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKN-----SVLVDNGDVIQGS 66 (339)
T ss_dssp EEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCSC-----EEEEECSCCSSSS
T ss_pred eEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCCC-----EEEEECCCCCCCc
Confidence 345888999999874 344455544321111 1456799999743
No 210
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=58.19 E-value=1.8e+02 Score=30.16 Aligned_cols=169 Identities=9% Similarity=0.153 Sum_probs=84.0
Q ss_pred CcEEEEECC-CCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCC
Q 001901 150 ADVHCYDVL-TNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (998)
Q Consensus 150 ~dv~~yD~~-t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~ 227 (998)
..+++||.. ...|...... + ...+.+.. ++.||+.. . ...+++||.. ....|.... +..
T Consensus 117 ~~l~~~d~~g~~~~~~~~~~---~---~~~~~~~~~~g~l~vgt-~------~~~l~~~d~~-g~~~~~~~~-----~~~ 177 (330)
T 3hxj_A 117 GHLYAINTDGTEKWRFKTKK---A---IYATPIVSEDGTIYVGS-N------DNYLYAINPD-GTEKWRFKT-----NDA 177 (330)
T ss_dssp SEEEEECTTSCEEEEEECSS---C---CCSCCEECTTSCEEEEC-T------TSEEEEECTT-SCEEEEEEC-----SSC
T ss_pred CEEEEEcCCCCEEEEEcCCC---c---eeeeeEEcCCCEEEEEc-C------CCEEEEECCC-CCEeEEEec-----CCC
Confidence 468888887 3457654322 1 12223344 45666632 2 2468999988 433576542 111
Q ss_pred CcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCc
Q 001901 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPL 307 (998)
Q Consensus 228 R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~ 307 (998)
.-.+.+...++.||+.. ..+++|| .+....|....... .....+...++.||+... -
T Consensus 178 -~~~~~~~d~~g~l~v~t--------~~l~~~d-~~g~~~~~~~~~~~------~~~~~~~~~~g~l~v~t~-------~ 234 (330)
T 3hxj_A 178 -ITSAASIGKDGTIYFGS--------DKVYAIN-PDGTEKWNFYAGYW------TVTRPAISEDGTIYVTSL-------D 234 (330)
T ss_dssp -CCSCCEECTTCCEEEES--------SSEEEEC-TTSCEEEEECCSSC------CCSCCEECTTSCEEEEET-------T
T ss_pred -ceeeeEEcCCCEEEEEe--------CEEEEEC-CCCcEEEEEccCCc------ceeceEECCCCeEEEEcC-------C
Confidence 12233333444677654 4688999 44445787653321 111222233557777531 1
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCC-eEE
Q 001901 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAG-VWC 376 (998)
Q Consensus 308 ~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~-~W~ 376 (998)
..++.|+......|........ . .+.++. ++.|||.. . ...+++||+... .|.
T Consensus 235 ~gl~~~~~~g~~~~~~~~~~~~-----~-~~~~~~~~g~l~v~t-~---------~ggl~~~d~~g~~~~~ 289 (330)
T 3hxj_A 235 GHLYAINPDGTEKWRFKTGKRI-----E-SSPVIGNTDTIYFGS-Y---------DGHLYAINPDGTEKWN 289 (330)
T ss_dssp TEEEEECTTSCEEEEEECSSCC-----C-SCCEECTTSCEEEEC-T---------TCEEEEECTTSCEEEE
T ss_pred CeEEEECCCCCEeEEeeCCCCc-----c-ccceEcCCCeEEEec-C---------CCCEEEECCCCcEEEE
Confidence 3466665433334443322111 1 122333 57777642 1 224888987433 454
No 211
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=57.29 E-value=2e+02 Score=30.56 Aligned_cols=63 Identities=8% Similarity=0.032 Sum_probs=33.5
Q ss_pred EEEEEeCCCCCCCCcccEEEEEcCCCCCc-----eEEeeecCCCCC---CCcccEEEEE----CCcEE-EEEcCCCCCCC
Q 001901 186 MVVIQGGIGPAGLSAEDLHVLDLTQQRPR-----WHRVVVQGPGPG---PRYGHVMALV----GQRYL-MAIGGNDGKRP 252 (998)
Q Consensus 186 ~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~-----W~~l~~~g~~P~---~R~~hs~~~~----~~~~L-yv~GG~~g~~~ 252 (998)
.+++.|+.+ ..+.+||+.+.. . +..+. ..+. ...-.++... .++.. ++.|+.++
T Consensus 82 ~~l~s~~~d------g~i~iw~~~~~~-~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg--- 148 (397)
T 1sq9_A 82 CLVATTSFS------GDLLFYRITRED-ETKKVIFEKLD---LLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKG--- 148 (397)
T ss_dssp EEEEEEETT------SCEEEEEEEECT-TTCCEEEEEEC---CSCTTGGGSCEEEEEEECCC----CEEEEEEETTS---
T ss_pred cEEEEEcCC------CCEEEEEccCCc-ccccccceeec---ccccccCCCcEEEEEEeeccCCCCceEEEEEeCCC---
Confidence 677777652 468889887753 2 44443 1111 1222333444 33355 77777664
Q ss_pred cccEEEEECCC
Q 001901 253 LADVWALDTAA 263 (998)
Q Consensus 253 lndv~~yD~~s 263 (998)
.+..||+.+
T Consensus 149 --~i~iwd~~~ 157 (397)
T 1sq9_A 149 --TTYIWKFHP 157 (397)
T ss_dssp --CEEEEEEES
T ss_pred --cEEEEeCCc
Confidence 566777765
No 212
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=56.73 E-value=1e+02 Score=32.81 Aligned_cols=96 Identities=14% Similarity=0.112 Sum_probs=39.7
Q ss_pred cEEEEECCCCc-EEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCC
Q 001901 151 DVHCYDVLTNK-WSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (998)
Q Consensus 151 dv~~yD~~t~~-W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~ 227 (998)
.+.+||+.+.. |..+.... .. ...-..+.+ ++..++.|+.+ ..+.+||+.+.. .|...... ..+..
T Consensus 78 ~v~vwd~~~~~~~~~~~~~~--~~-~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~-~~~~~~~~-~~~h~ 146 (377)
T 3dwl_C 78 NAYVYEKRPDGTWKQTLVLL--RL-NRAATFVRWSPNEDKFAVGSGA------RVISVCYFEQEN-DWWVSKHL-KRPLR 146 (377)
T ss_dssp SEEEC------CCCCEEECC--CC-SSCEEEEECCTTSSCCEEEESS------SCEEECCC------CCCCEEE-CSSCC
T ss_pred eEEEEEcCCCCceeeeeEec--cc-CCceEEEEECCCCCEEEEEecC------CeEEEEEECCcc-cceeeeEe-ecccC
Confidence 57778887766 44332221 11 111122222 34556666542 458888887753 23222211 11122
Q ss_pred CcccEEEEECCcEEEEEcCCCCCCCcccEEEEECC
Q 001901 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTA 262 (998)
Q Consensus 228 R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~ 262 (998)
..-.+++...++.+++.|+.++ .+..||+.
T Consensus 147 ~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~ 176 (377)
T 3dwl_C 147 STILSLDWHPNNVLLAAGCADR-----KAYVLSAY 176 (377)
T ss_dssp SCEEEEEECTTSSEEEEEESSS-----CEEEEEEC
T ss_pred CCeEEEEEcCCCCEEEEEeCCC-----EEEEEEEE
Confidence 2223333444446778887764 46677764
No 213
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=56.55 E-value=2e+02 Score=30.36 Aligned_cols=52 Identities=12% Similarity=0.096 Sum_probs=26.8
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCC
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQ 210 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t 210 (998)
.+|.+|..+.+.+.+.... .....-+..+.-++.+|+.+.. ...+.+|++..
T Consensus 78 ~~~~~~~~~g~~~~~~~~~--~~~~~p~~~~~dg~~l~~~~~~------~~~v~~~~~~~ 129 (361)
T 3scy_A 78 SAFAFDKEKGTLHLLNTQK--TMGADPCYLTTNGKNIVTANYS------GGSITVFPIGQ 129 (361)
T ss_dssp EEEEEETTTTEEEEEEEEE--CSSSCEEEEEECSSEEEEEETT------TTEEEEEEBCT
T ss_pred EEEEEeCCCCcEEEeeEec--cCCCCcEEEEECCCEEEEEECC------CCEEEEEEeCC
Confidence 3456666667777665431 0111222233333466665532 24688888864
No 214
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=56.47 E-value=1.6e+02 Score=34.59 Aligned_cols=251 Identities=17% Similarity=0.118 Sum_probs=115.9
Q ss_pred cCCcEEEEECCCCcEEEe-cCCCC-------CCCCccceEEEEeCC-EEEEEeCCCCCCCCcccEEEEEcCCCCCceEEe
Q 001901 148 ATADVHCYDVLTNKWSRI-TPFGE-------PPTPRAAHVATAVGT-MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRV 218 (998)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l-~~~g~-------~P~pR~~hsa~~~~~-~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l 218 (998)
..+.+.++|..+.+=.+. ...+. .|.+|.........+ .+++.= .....++++|..... ...+
T Consensus 264 ~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~------~~~g~v~~vd~~~~~--~~~v 335 (567)
T 1qks_A 264 WPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV------KETGKILLVDYTDLN--NLKT 335 (567)
T ss_dssp ETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE------TTTTEEEEEETTCSS--EEEE
T ss_pred cCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEe------cCCCeEEEEecCCCc--ccee
Confidence 346777888877654332 22110 134455543333333 333321 123578999987642 4444
Q ss_pred eecCCCCCCCcccEEEEECCc-EEEEEcCCCCCCCcccEEEEECCCCCceEEEcccC-CCCCCCccceEEEEEe-CCEEE
Q 001901 219 VVQGPGPGPRYGHVMALVGQR-YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPE-GEGPPPCMYATASARS-DGLLL 295 (998)
Q Consensus 219 ~~~g~~P~~R~~hs~~~~~~~-~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~-~~~P~~r~~~~a~~~~-~~~ly 295 (998)
. .++.++.-|....-.++ ++|+... ..+.+.++|+.+. +=...-+. +..|.+.+... .... .+.+|
T Consensus 336 ~---~i~~~~~~~d~~~~pdgr~~~va~~-----~sn~V~ViD~~t~--kl~~~i~vgg~~Phpg~g~~-~~~p~~g~v~ 404 (567)
T 1qks_A 336 T---EISAERFLHDGGLDGSHRYFITAAN-----ARNKLVVIDTKEG--KLVAIEDTGGQTPHPGRGAN-FVHPTFGPVW 404 (567)
T ss_dssp E---EEECCSSEEEEEECTTSCEEEEEEG-----GGTEEEEEETTTT--EEEEEEECSSSSBCCTTCEE-EEETTTEEEE
T ss_pred e---eeeccccccCceECCCCCEEEEEeC-----CCCeEEEEECCCC--cEEEEEeccCcCCCCcccee-eECCCCCcEE
Confidence 3 33556777776655443 4444332 2467999999988 43332334 44454433322 1222 35666
Q ss_pred EEeccCCCCCCcccEEEEecCC----CCeEEEEECCCCCCCCcceeEEEEE--CCEEEEEcccCCCCCccccCCeEEEEE
Q 001901 296 LCGGRDASSVPLASAYGLAKHR----DGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLD 369 (998)
Q Consensus 296 vfGG~~~~~~~~~dv~~~~~~~----~~~W~w~~~~g~~P~pR~~hsav~~--~~~L~V~GG~~~~~~~~~~~~dv~vyD 369 (998)
+.+-... ..+-.++... ...|+....-.... .. ...+... +..+||---.+.. ....+.|.+||
T Consensus 405 ~t~~~g~-----~~Vsvid~~~~~~~~~~~kvv~~i~~~g-~g-~~~i~~~p~~~~l~v~~~~~~~---~~~~~~v~v~d 474 (567)
T 1qks_A 405 ATSHMGD-----DSVALIGTDPEGHPDNAWKILDSFPALG-GG-SLFIKTHPNSQYLYVDATLNPE---AEISGSVAVFD 474 (567)
T ss_dssp EEEBSSS-----SEEEEEECCTTTCTTTBTSEEEEEECSC-SC-CCCEECCTTCSEEEEECTTCSS---HHHHTCEEEEE
T ss_pred EeCCCCC-----CeEEEecCCCCCCccccCEEEEEEecCC-CC-CEEEEeCCCCCeEEEecCCCCC---cccCceEEEEE
Confidence 6542211 1222333222 11255433321111 00 0111122 2468875311110 01145799999
Q ss_pred CCCC-------eEEEcccCcCCCCCCCCccccCCCCCccCCCCcceeEEEEE-CCEEEEEcCCCCCCCcccEEEeccccc
Q 001901 370 TAAG-------VWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAV-GDLIFIYGGLRGGVLLDDLLVAEDLAA 441 (998)
Q Consensus 370 ~~t~-------~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~-~~~LyVfGG~~~~~~l~Dv~~ld~~~~ 441 (998)
..+. .+..++.. .|+ .. .....|..|-...= +..||+--+ ++...-+.+.++|....
T Consensus 475 ~~~~~~~g~~~~~~~~~~~-------~~~--~~-----~~~~~~~~~~~~~~~G~~~~~s~~-~~~~~~~~i~v~D~~t~ 539 (567)
T 1qks_A 475 IKAMTGDGSDPEFKTLPIA-------EWA--GI-----TEGQPRVVQGEFNKDGTEVWFSVW-NGKDQESALVVVDDKTL 539 (567)
T ss_dssp GGGCCCSSSCCCEEEECHH-------HHH--TC-----CSSCCEEEEEEECTTSSEEEEEEE-CCTTSCCEEEEEETTTT
T ss_pred CCcccccccCCCcEEeccc-------ccc--cc-----CCCCcceEeeeECCCCCEEEEEee-cCCCCCCcEEEEECCCc
Confidence 8876 23333210 000 00 00125666654443 558888622 22334577888887654
Q ss_pred c
Q 001901 442 A 442 (998)
Q Consensus 442 ~ 442 (998)
.
T Consensus 540 ~ 540 (567)
T 1qks_A 540 E 540 (567)
T ss_dssp E
T ss_pred e
Confidence 4
No 215
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=56.17 E-value=2.6e+02 Score=31.58 Aligned_cols=120 Identities=11% Similarity=0.095 Sum_probs=55.4
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
.+.+||.....-..+.... ..-..+.+ +++.++.|+.+ ..+.+||.... .-..+. + ....
T Consensus 367 ~v~~~~~~~~~~~~~~~~~------~~v~~~~~s~dg~~l~~~~~d------~~v~~~~~~~~--~~~~~~--~--~~~~ 428 (577)
T 2ymu_A 367 TVKLWNRNGQLLQTLTGHS------SSVRGVAFSPDGQTIASASDD------KTVKLWNRNGQ--LLQTLT--G--HSSS 428 (577)
T ss_dssp EEEEEETTCCEEEEEECCS------SCEEEEEECTTSSCEEEEETT------SEEEEECTTCC--EEEEEE--C--CSSC
T ss_pred EEEEEcCCCCEEEEecCCC------CCeEEEEECCCCCEEEEEeCC------CEEEEEeCCCC--EEEEec--C--CCCC
Confidence 5667776555444443221 11112222 34556666542 45788886543 122221 1 1111
Q ss_pred cccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccC
Q 001901 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRD 301 (998)
Q Consensus 229 ~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~ 301 (998)
-.+++...++.+++.|+.++ .+..||.... .-..+..... .....+...++++++.|+.+
T Consensus 429 -v~~~~~s~d~~~l~~~~~d~-----~v~~w~~~~~--~~~~~~~~~~-----~v~~~~~spd~~~las~~~d 488 (577)
T 2ymu_A 429 -VWGVAFSPDDQTIASASDDK-----TVKLWNRNGQ--LLQTLTGHSS-----SVRGVAFSPDGQTIASASDD 488 (577)
T ss_dssp -EEEEEECTTSSEEEEEETTS-----EEEEEETTSC--EEEEEECCSS-----CEEEEEECTTSCEEEEEETT
T ss_pred -eEEEEECCCCCEEEEEcCCC-----EEEEEECCCC--EEEEEcCCCC-----CEEEEEEcCCCCEEEEEeCC
Confidence 11233333446777776654 4677787554 3333322111 12222334477777777654
No 216
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=56.16 E-value=51 Score=36.63 Aligned_cols=66 Identities=9% Similarity=-0.029 Sum_probs=33.3
Q ss_pred EEEEeCCCCCCCCcccEEEEEcCCCCC-ceEEeeecCCC-CCCCcccEEEEEC-CcEEEEEcCCCCCCCcccEEEEECCC
Q 001901 187 VVIQGGIGPAGLSAEDLHVLDLTQQRP-RWHRVVVQGPG-PGPRYGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAA 263 (998)
Q Consensus 187 lyVfGG~~~~~~~~~dv~~~Dl~t~t~-~W~~l~~~g~~-P~~R~~hs~~~~~-~~~Lyv~GG~~g~~~lndv~~yD~~s 263 (998)
+++.|+.+ ..+.+||+.+... .+...... .. .....-++++... ++.+++.|+.++ .+..||+.+
T Consensus 196 ~l~s~~~d------g~i~vwd~~~~~~~~~~~~~~~-~~~~h~~~v~~v~~~p~~~~~l~s~~~dg-----~i~i~d~~~ 263 (430)
T 2xyi_A 196 YLLSASDD------HTICLWDINATPKEHRVIDAKN-IFTGHTAVVEDVAWHLLHESLFGSVADDQ-----KLMIWDTRN 263 (430)
T ss_dssp EEEEECTT------SCEEEEETTSCCBGGGEEECSE-EECCCSSCEEEEEECSSCTTEEEEEETTS-----EEEEEETTC
T ss_pred eEEEEeCC------CeEEEEeCCCCCCCCceeccce-eecCCCCCEeeeEEeCCCCCEEEEEeCCC-----eEEEEECCC
Confidence 66667642 4689999987321 12211000 11 1111222333332 335777776554 688899876
Q ss_pred C
Q 001901 264 K 264 (998)
Q Consensus 264 ~ 264 (998)
.
T Consensus 264 ~ 264 (430)
T 2xyi_A 264 N 264 (430)
T ss_dssp S
T ss_pred C
Confidence 5
No 217
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=56.14 E-value=1.9e+02 Score=29.85 Aligned_cols=119 Identities=13% Similarity=0.156 Sum_probs=53.5
Q ss_pred EEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEe-C---CEEEEEeccCCCCCCcccEEEEec
Q 001901 240 YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS-D---GLLLLCGGRDASSVPLASAYGLAK 315 (998)
Q Consensus 240 ~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~-~---~~lyvfGG~~~~~~~~~dv~~~~~ 315 (998)
.+++.|+.++ .+..||+.+....|..+..... -...-.++... + +.+++.|+.++. ..+|.+..
T Consensus 171 ~~l~sgs~D~-----~v~lwd~~~~~~~~~~~~~l~~---H~~~V~~v~~sp~~~~~~~las~s~D~~----v~iWd~~~ 238 (297)
T 2pm7_B 171 RKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEG---HSDWVRDVAWSPTVLLRSYMASVSQDRT----CIIWTQDN 238 (297)
T ss_dssp CEEEEEETTS-----CEEEEEEETTTTEEEEEEEECC---CSSCEEEEEECCCCSSSEEEEEEETTSC----EEEEEESS
T ss_pred ceEEEEcCCC-----cEEEEEEcCCCceEEEEEEecC---CCCceEEEEECCCCCCceEEEEEECCCc----EEEEEeCC
Confidence 4777787765 3555665443224544332211 01112222222 2 477788876542 23454433
Q ss_pred CCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECC-CCeEEEcccC
Q 001901 316 HRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTA-AGVWCDTKSV 381 (998)
Q Consensus 316 ~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~-t~~W~~v~~~ 381 (998)
.. +.|........ .....-.++++. ++.+++.||.++ .+.+++.. ...|..+..+
T Consensus 239 ~~-~~~~~~~~~~~-~~~~~v~~~~~s~~g~~las~~~D~---------~v~lw~~~~~g~w~~~~~~ 295 (297)
T 2pm7_B 239 EQ-GPWKKTLLKEE-KFPDVLWRASWSLSGNVLALSGGDN---------KVTLWKENLEGKWEPAGEV 295 (297)
T ss_dssp TT-SCCEEEESSSS-CCSSCEEEEEECSSSCCEEEEETTS---------CEEEEEECTTSCEEEC---
T ss_pred CC-Cccceeeeecc-cCCCcEEEEEECCCCCEEEEEcCCC---------cEEEEEECCCCcEEecccc
Confidence 21 23443333211 011122233332 567778887643 24555544 4679877654
No 218
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=54.60 E-value=1.5e+02 Score=30.94 Aligned_cols=66 Identities=9% Similarity=0.102 Sum_probs=33.8
Q ss_pred EEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECC---cEEEEEcCCCCCCCcccEEEEECC
Q 001901 186 MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQ---RYLMAIGGNDGKRPLADVWALDTA 262 (998)
Q Consensus 186 ~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~---~~Lyv~GG~~g~~~lndv~~yD~~ 262 (998)
.+++.|+... ....+.+||+.+.. .......+ ....-.++....+ +.+++.|+.++ .+..||+.
T Consensus 32 ~l~~~~s~~~---~d~~v~iw~~~~~~--~~~~~~~~---~~~~v~~~~~~~~~~~~~~l~~~~~dg-----~i~iwd~~ 98 (357)
T 3i2n_A 32 KFVTMGNFAR---GTGVIQLYEIQHGD--LKLLREIE---KAKPIKCGTFGATSLQQRYLATGDFGG-----NLHIWNLE 98 (357)
T ss_dssp EEEEEEC--C---CCEEEEEEEECSSS--EEEEEEEE---ESSCEEEEECTTCCTTTCCEEEEETTS-----CEEEECTT
T ss_pred eEEEecCccC---CCcEEEEEeCCCCc--ccceeeec---ccCcEEEEEEcCCCCCCceEEEecCCC-----eEEEEeCC
Confidence 6777776411 12568899988753 33332111 1111122222222 25677777654 57888887
Q ss_pred CC
Q 001901 263 AK 264 (998)
Q Consensus 263 s~ 264 (998)
+.
T Consensus 99 ~~ 100 (357)
T 3i2n_A 99 AP 100 (357)
T ss_dssp SC
T ss_pred CC
Confidence 66
No 219
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=54.25 E-value=2.3e+02 Score=30.39 Aligned_cols=100 Identities=14% Similarity=0.154 Sum_probs=51.4
Q ss_pred cCCcEEEEECCCCcEEEecCCCCCCCCcc-ceEEEEe---CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCC
Q 001901 148 ATADVHCYDVLTNKWSRITPFGEPPTPRA-AHVATAV---GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGP 223 (998)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~-~hsa~~~---~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~ 223 (998)
.-..+.++|+.+.+-...-... .+.... .-....+ ++.+++.|+.+ ..+.+||+......-..+. +
T Consensus 178 ~D~~i~~wd~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~l~sgs~D------~~v~~wd~~~~~~~~~~~~--~- 247 (380)
T 3iz6_a 178 GDQTCVLWDVTTGQRISIFGSE-FPSGHTADVLSLSINSLNANMFISGSCD------TTVRLWDLRITSRAVRTYH--G- 247 (380)
T ss_dssp TTSCEEEECTTTCCEEEEECCC-SSSSCCSCEEEEEECSSSCCEEEEEETT------SCEEEEETTTTCCCCEEEC--C-
T ss_pred CCCcEEEEEcCCCcEEEEeecc-cCCCCccCeEEEEeecCCCCEEEEEECC------CeEEEEECCCCCcceEEEC--C-
Confidence 3456888998887654432210 011111 1111222 45777777753 4688999874311122221 1
Q ss_pred CCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 224 GPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 224 ~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
..-.-.+++...++..++.|+.++ .+..||+.+.
T Consensus 248 --h~~~v~~v~~~p~~~~l~s~s~D~-----~i~lwd~~~~ 281 (380)
T 3iz6_a 248 --HEGDINSVKFFPDGQRFGTGSDDG-----TCRLFDMRTG 281 (380)
T ss_dssp --CSSCCCEEEECTTSSEEEEECSSS-----CEEEEETTTT
T ss_pred --cCCCeEEEEEecCCCeEEEEcCCC-----eEEEEECCCC
Confidence 011112333444556788888765 5778898876
No 220
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=53.91 E-value=2.3e+02 Score=30.33 Aligned_cols=146 Identities=7% Similarity=-0.015 Sum_probs=67.3
Q ss_pred ccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCC
Q 001901 201 EDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPP 280 (998)
Q Consensus 201 ~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~ 280 (998)
..+.+||+.+.... ..+. . ...-.+++.-.++++++.|+. +.+.+++..+. .......... ..
T Consensus 157 ~~i~iwd~~~~~~~-~~~~--~----~~~V~~v~fspdg~~l~s~s~------~~~~~~~~~~~--~~~~~~~~~~--~~ 219 (365)
T 4h5i_A 157 AIMRIIDPSDLTEK-FEIE--T----RGEVKDLHFSTDGKVVAYITG------SSLEVISTVTG--SCIARKTDFD--KN 219 (365)
T ss_dssp CEEEEEETTTTEEE-EEEE--C----SSCCCEEEECTTSSEEEEECS------SCEEEEETTTC--CEEEEECCCC--TT
T ss_pred CEEEEeECCCCcEE-EEeC--C----CCceEEEEEccCCceEEeccc------eeEEEEEeccC--cceeeeecCC--CC
Confidence 46889999875311 1121 1 111123434445466666652 24667777766 3322111110 00
Q ss_pred ccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEE-ECCEEEEEcccCCCCCcc
Q 001901 281 CMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVF-VNARLHVSGGALGGGRMV 359 (998)
Q Consensus 281 r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~-~~~~L~V~GG~~~~~~~~ 359 (998)
..........++..++.++.++... ..++.++.... .+..............-.++++ -++++++.|+.++
T Consensus 220 ~~v~~v~fspdg~~l~~~s~d~~~~--~~i~~~~~~~~-~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~----- 291 (365)
T 4h5i_A 220 WSLSKINFIADDTVLIAASLKKGKG--IVLTKISIKSG-NTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDN----- 291 (365)
T ss_dssp EEEEEEEEEETTEEEEEEEESSSCC--EEEEEEEEETT-EEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTS-----
T ss_pred CCEEEEEEcCCCCEEEEEecCCcce--eEEeecccccc-eecceeeeeecCCCCCeEeEEECCCCCceEEEcCCC-----
Confidence 1122233456888888887655432 22333333222 1111111000000011112222 2678888888643
Q ss_pred ccCCeEEEEECCCCeE
Q 001901 360 EDSSSVAVLDTAAGVW 375 (998)
Q Consensus 360 ~~~~dv~vyD~~t~~W 375 (998)
.|.+||..+.+-
T Consensus 292 ----~V~iwd~~~~~~ 303 (365)
T 4h5i_A 292 ----SIALVKLKDLSM 303 (365)
T ss_dssp ----CEEEEETTTTEE
T ss_pred ----EEEEEECCCCcE
Confidence 388999988764
No 221
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=51.68 E-value=64 Score=34.01 Aligned_cols=30 Identities=20% Similarity=0.368 Sum_probs=19.6
Q ss_pred CCEEEEEcccCCCCCccccCCeEEEEECC-CCeEEEcccC
Q 001901 343 NARLHVSGGALGGGRMVEDSSSVAVLDTA-AGVWCDTKSV 381 (998)
Q Consensus 343 ~~~L~V~GG~~~~~~~~~~~~dv~vyD~~-t~~W~~v~~~ 381 (998)
++.+++.||.++ .+.+|+.. ...|..+..+
T Consensus 273 ~g~~las~~~D~---------~v~lw~~~~~g~~~~~~~~ 303 (316)
T 3bg1_A 273 TANILAVSGGDN---------KVTLWKESVDGQWVCISDV 303 (316)
T ss_dssp TTCCEEEEESSS---------CEEEEEECTTSCEEEEEEC
T ss_pred CCCEEEEEcCCC---------eEEEEEECCCCcEEEeeec
Confidence 467777777643 25556653 4689888766
No 222
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=50.42 E-value=2.1e+02 Score=28.80 Aligned_cols=180 Identities=9% Similarity=-0.030 Sum_probs=92.6
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCC-CC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP-GP 227 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P-~~ 227 (998)
+.+++||+. ..+....... ....-++++.. ++.+|+.... ...+++||... ++.... .| ..
T Consensus 36 ~~v~~~d~~-~~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~g---~~~~~~----~~~~~ 98 (299)
T 2z2n_A 36 NMISCINLD-GKITEYPLPT---PDAKVMCLTISSDGEVWFTENA------ANKIGRITKKG---IIKEYT----LPNPD 98 (299)
T ss_dssp TEEEEECTT-CCEEEEECSS---TTCCEEEEEECTTSCEEEEETT------TTEEEEECTTS---CEEEEE----CSSTT
T ss_pred CcEEEEcCC-CCeEEecCCc---ccCceeeEEECCCCCEEEeCCC------CCeEEEECCCC---cEEEEe----CCCcC
Confidence 367889888 7776654221 11223344443 3477776532 13588999863 354443 12 12
Q ss_pred CcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCc
Q 001901 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPL 307 (998)
Q Consensus 228 R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~ 307 (998)
..-++++...++.||+.... -..+++||+ +. +...+..... ...-...+.-.++++|+.... .
T Consensus 99 ~~~~~i~~~~~g~l~v~~~~-----~~~i~~~d~-~g--~~~~~~~~~~---~~~~~~i~~~~~g~l~v~~~~------~ 161 (299)
T 2z2n_A 99 SAPYGITEGPNGDIWFTEMN-----GNRIGRITD-DG--KIREYELPNK---GSYPSFITLGSDNALWFTENQ------N 161 (299)
T ss_dssp CCEEEEEECTTSCEEEEETT-----TTEEEEECT-TC--CEEEEECSST---TCCEEEEEECTTSCEEEEETT------T
T ss_pred CCceeeEECCCCCEEEEecC-----CceEEEECC-CC--CEEEecCCCC---CCCCceEEEcCCCCEEEEeCC------C
Confidence 23344545445578886532 246889998 55 3333321111 011122222336788886421 2
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEc
Q 001901 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (998)
Q Consensus 308 ~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v 378 (998)
..++.++. +++......+.. ...-.+.++. ++.+||.... .+.+++||+ +.++..+
T Consensus 162 ~~i~~~~~--~g~~~~~~~~~~---~~~~~~i~~~~~g~l~v~~~~---------~~~i~~~~~-~g~~~~~ 218 (299)
T 2z2n_A 162 NAIGRITE--SGDITEFKIPTP---ASGPVGITKGNDDALWFVEII---------GNKIGRITT-SGEITEF 218 (299)
T ss_dssp TEEEEECT--TCCEEEEECSST---TCCEEEEEECTTSSEEEEETT---------TTEEEEECT-TCCEEEE
T ss_pred CEEEEEcC--CCcEEEeeCCCC---CCcceeEEECCCCCEEEEccC---------CceEEEECC-CCcEEEE
Confidence 35677776 445544333221 1112233333 4678876431 345899999 7777654
No 223
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=50.06 E-value=1.1e+02 Score=35.25 Aligned_cols=184 Identities=14% Similarity=0.104 Sum_probs=87.5
Q ss_pred EEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCccc
Q 001901 152 VHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGH 231 (998)
Q Consensus 152 v~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~h 231 (998)
+.+||+.+.+...+... +. .. .+..-+++.+++++..... ..++|++|+.+.. +..+. ..+ ....
T Consensus 134 ~~l~d~~~g~~~~l~~~---~~--~~-~~~spDG~~la~~~~~~~~--~~~i~~~d~~~g~--~~~l~---~~~--~~~~ 198 (582)
T 3o4h_A 134 VALYALDGGGLRELARL---PG--FG-FVSDIRGDLIAGLGFFGGG--RVSLFTSNLSSGG--LRVFD---SGE--GSFS 198 (582)
T ss_dssp EEEEEEETTEEEEEEEE---SS--CE-EEEEEETTEEEEEEEEETT--EEEEEEEETTTCC--CEEEC---CSS--CEEE
T ss_pred ceEEEccCCcEEEeecC---CC--ce-EEECCCCCEEEEEEEcCCC--CeEEEEEcCCCCC--ceEee---cCC--Cccc
Confidence 34778888887777643 22 11 1222244444444432211 2459999988763 66554 111 1112
Q ss_pred EEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCC---CCCccceEEEEEeCCEEEEEeccCCCCCCcc
Q 001901 232 VMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEG---PPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (998)
Q Consensus 232 s~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~---P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~ 308 (998)
..+.-.+++.++.+..++ ...++.+|+.+. +...+...... +........+...++++++.+..++. .
T Consensus 199 ~~~~SpDG~~l~~~~~~~---~~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~----~ 269 (582)
T 3o4h_A 199 SASISPGMKVTAGLETAR---EARLVTVDPRDG--SVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGR----S 269 (582)
T ss_dssp EEEECTTSCEEEEEECSS---CEEEEEECTTTC--CEEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTE----E
T ss_pred cceECCCCCEEEEccCCC---eeEEEEEcCCCC--cEEEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCc----E
Confidence 333333434444443333 257999999988 55533221110 00000000113346677776654431 2
Q ss_pred cEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEc
Q 001901 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (998)
Q Consensus 309 dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v 378 (998)
.+|.+ ++. ... +.. .-.++.+.++++++.++.... ...+|.+|..+ +.+++
T Consensus 270 ~l~~~-----g~~--~~~----~~~-~v~~~~~sdg~~l~~~s~~~~------p~~l~~~d~~~-~~~~l 320 (582)
T 3o4h_A 270 AVFID-----GER--VEA----PQG-NHGRVVLWRGKLVTSHTSLST------PPRIVSLPSGE-PLLEG 320 (582)
T ss_dssp EEEET-----TEE--ECC----CSS-EEEEEEEETTEEEEEEEETTE------EEEEEEETTCC-EEECC
T ss_pred EEEEE-----CCe--ecc----CCC-ceEEEEecCCEEEEEEcCCCC------CCeEEEEcCCC-ceEEE
Confidence 33332 222 211 121 122333338888877654322 35688998876 66555
No 224
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=50.00 E-value=92 Score=37.81 Aligned_cols=128 Identities=9% Similarity=0.070 Sum_probs=70.6
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccE-EEEEcCCCCCceEEeeecCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDL-HVLDLTQQRPRWHRVVVQGPGPGP 227 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv-~~~Dl~t~t~~W~~l~~~g~~P~~ 227 (998)
.-+++||+.+.+|+........|.... .+.+.. ++.|++... +-+ ++||..+.. +........+|..
T Consensus 515 ~Gl~~~~~~~~~~~~~~~~~~l~~~~i-~~i~~d~~g~lWi~T~--------~Glv~~~d~~~~~--~~~~~~~~gl~~~ 583 (781)
T 3v9f_A 515 GGVGIYTPDMQLVRKFNQYEGFCSNTI-NQIYRSSKGQMWLATG--------EGLVCFPSARNFD--YQVFQRKEGLPNT 583 (781)
T ss_dssp SCEEEECTTCCEEEEECTTTTCSCSCE-EEEEECTTSCEEEEET--------TEEEEESCTTTCC--CEEECGGGTCSCC
T ss_pred CCEEEEeCCCCeEEEccCCCCCCCCee-EEEEECCCCCEEEEEC--------CCceEEECCCCCc--EEEccccCCCCCc
Confidence 568899999999888764322222211 222222 346776532 235 888887763 6655544345544
Q ss_pred CcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEE-eCCEEEEEe
Q 001901 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASAR-SDGLLLLCG 298 (998)
Q Consensus 228 R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~-~~~~lyvfG 298 (998)
.. .+++.-.++.||+.+. +-+.+||+.+. ++.......-.+.......++.. .+|.||+.|
T Consensus 584 ~i-~~i~~d~~g~lW~~t~-------~Gl~~~~~~~~--~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~ 645 (781)
T 3v9f_A 584 HI-RAISEDKNGNIWASTN-------TGISCYITSKK--CFYTYDHSNNIPQGSFISGCVTKDHNGLIYFGS 645 (781)
T ss_dssp CC-CEEEECSSSCEEEECS-------SCEEEEETTTT--EEEEECGGGTCCSSCEEEEEEEECTTSCEEEEE
T ss_pred eE-EEEEECCCCCEEEEcC-------CceEEEECCCC--ceEEecccCCccccccccCceEECCCCEEEEEC
Confidence 43 3444444556777642 34889999988 77766433222222232233333 366666643
No 225
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=49.86 E-value=53 Score=33.72 Aligned_cols=108 Identities=9% Similarity=-0.018 Sum_probs=56.8
Q ss_pred eCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEee---e-c---CCCCCC----CcccEEEEE-CCcEEEEEcCCCCC
Q 001901 183 VGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVV---V-Q---GPGPGP----RYGHVMALV-GQRYLMAIGGNDGK 250 (998)
Q Consensus 183 ~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~---~-~---g~~P~~----R~~hs~~~~-~~~~Lyv~GG~~g~ 250 (998)
..+++|+|=| +.+|+||..+.+....... . . ..+|.. ... ++... .++++|+|-|
T Consensus 69 ~~g~~~fFkg--------~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~ID-AA~~~~~~gk~yfFkG---- 135 (225)
T 3oyo_A 69 EASEAYVFSG--------NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSID-SAFRSTKGKEVYLFKG---- 135 (225)
T ss_dssp STTEEEEEET--------TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCC-EEEECSSTTEEEEEET----
T ss_pred CCCeEEEEcC--------CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccc-eEEEECCCCcEEEEeC----
Confidence 4679999987 4689998753221111111 1 1 023321 222 22222 3458999987
Q ss_pred CCcccEEEEECCCCCceE--EEcccCCCCCC------CccceEEEEE-eCCEEEEEeccCCCCCCcccEEEEecC
Q 001901 251 RPLADVWALDTAAKPYEW--RKLEPEGEGPP------PCMYATASAR-SDGLLLLCGGRDASSVPLASAYGLAKH 316 (998)
Q Consensus 251 ~~lndv~~yD~~s~~~~W--~~v~~~~~~P~------~r~~~~a~~~-~~~~lyvfGG~~~~~~~~~dv~~~~~~ 316 (998)
+..|+||.....+.. ..+.. ..|. +....+|... .++++|+|-| +..|+|+..
T Consensus 136 ---~~yw~~d~~~~~~~~gPk~I~~--~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG--------~~ywr~d~~ 197 (225)
T 3oyo_A 136 ---NKYVRIAYDSKQLVGNIRNIGD--GFPVLNGTEFESGIDACFASHKEPEAYLFKG--------QNYVRIDFT 197 (225)
T ss_dssp ---TEEEEEETTTTEEEEEEEEHHH--HCGGGTTSTTTTCCSEEEECSSTTEEEEEET--------TEEEEEECC
T ss_pred ---CeEEEEECCCCeecCCCcchhh--cCCCcccccCCCCcCEEEEeCCCCEEEEEEC--------CEEEEEeCC
Confidence 578999987762222 11211 0111 2233333333 5899999976 345666654
No 226
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=48.40 E-value=3e+02 Score=29.95 Aligned_cols=103 Identities=10% Similarity=-0.053 Sum_probs=50.6
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEE-eCCEEEEEeCCC---CCCCCcccEEEEEcCCCCCceEEeeecCC-CC
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATA-VGTMVVIQGGIG---PAGLSAEDLHVLDLTQQRPRWHRVVVQGP-GP 225 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~-~~~~lyVfGG~~---~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~-~P 225 (998)
.+++||+.+.+-...- |.....|-+.. .+..+|+..-.. ..+...+.+.+||+.+.. ....++..+. .+
T Consensus 48 ~v~v~D~~t~~~~~~i-----~~g~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~-~~~~i~~~~~~~~ 121 (373)
T 2mad_H 48 QQWVLDAGSGSILGHV-----NGGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL-PIADIELPDAPRF 121 (373)
T ss_pred EEEEEECCCCeEEEEe-----cCCCCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCc-EEEEEECCCcccc
Confidence 7899999887643222 22222222222 245888875221 112234678899998753 2233321100 00
Q ss_pred -CCCcccEEEEE-CCcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 226 -GPRYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 226 -~~R~~hs~~~~-~~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
....-+.+++- .+++||+..-. ..+.++++| .+.
T Consensus 122 ~~g~~p~~~~~spDG~~l~v~n~~----~~~~v~viD-~t~ 157 (373)
T 2mad_H 122 DVGPYSWMNANTPNNADLLFFQFA----AGPAVGLVV-QGG 157 (373)
T ss_pred ccCCCccceEECCCCCEEEEEecC----CCCeEEEEE-CCC
Confidence 00111233332 34477776321 135799999 877
No 227
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=47.61 E-value=2.2e+02 Score=32.83 Aligned_cols=62 Identities=21% Similarity=0.309 Sum_probs=36.1
Q ss_pred CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECC-cEEEEEcCCCCCCCcccEEEEEC-
Q 001901 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQ-RYLMAIGGNDGKRPLADVWALDT- 261 (998)
Q Consensus 184 ~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~-~~Lyv~GG~~g~~~lndv~~yD~- 261 (998)
++.+|+.+.. .+.+.++|..+.. -...-..| ..-|.+++-.+ ++||+.+. + +.+..||+
T Consensus 148 ~~~~~vs~~~------d~~V~v~D~~t~~--~~~~i~~g-----~~~~~v~~spdg~~l~v~~~-d-----~~V~v~D~~ 208 (543)
T 1nir_A 148 PNLFSVTLRD------AGQIALVDGDSKK--IVKVIDTG-----YAVHISRMSASGRYLLVIGR-D-----ARIDMIDLW 208 (543)
T ss_dssp GGEEEEEEGG------GTEEEEEETTTCC--EEEEEECS-----TTEEEEEECTTSCEEEEEET-T-----SEEEEEETT
T ss_pred CCEEEEEEcC------CCeEEEEECCCce--EEEEEecC-----cccceEEECCCCCEEEEECC-C-----CeEEEEECc
Confidence 4588887653 3568999998863 22221112 11455544433 35666543 2 57999999
Q ss_pred -CCC
Q 001901 262 -AAK 264 (998)
Q Consensus 262 -~s~ 264 (998)
.+.
T Consensus 209 ~~t~ 212 (543)
T 1nir_A 209 AKEP 212 (543)
T ss_dssp SSSC
T ss_pred CCCC
Confidence 665
No 228
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=47.30 E-value=1.1e+02 Score=30.42 Aligned_cols=103 Identities=10% Similarity=0.122 Sum_probs=54.6
Q ss_pred CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecC--CCCCC--CcccEEEEECCcEEEEEcCCCCCCCcccEEEE
Q 001901 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG--PGPGP--RYGHVMALVGQRYLMAIGGNDGKRPLADVWAL 259 (998)
Q Consensus 184 ~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g--~~P~~--R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~y 259 (998)
++++|+|-| +.+|+|+..+. ....... .+|.. ....+.. ..++++|+|-| +..|+|
T Consensus 64 ~~~~yfFkG--------~~yw~~~~~~~----~~Pk~i~~~G~p~~~~~iDAA~~-~~~g~~yfFkg-------~~ywr~ 123 (195)
T 1itv_A 64 SKKLFFFSG--------RQVWVYTGASV----LGPRRLDKLGLGADVAQVTGALR-SGRGKMLLFSG-------RRLWRF 123 (195)
T ss_dssp TCCEEEEET--------TEEEEEETTEE----EEEEEGGGGTCCTTCCCCCEEEE-CSTTEEEEEET-------TEEEEE
T ss_pred CCeEEEEeC--------CEEEEEcCCcc----CCCEEeeecccCCCccceeEEEE-cCCCeEEEEeC-------CEEEEE
Confidence 568999987 46888885432 1111111 23332 3333333 44568999977 478999
Q ss_pred ECCCCCce--E-EEcc-cCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCC
Q 001901 260 DTAAKPYE--W-RKLE-PEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHR 317 (998)
Q Consensus 260 D~~s~~~~--W-~~v~-~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~ 317 (998)
|..++++. + ..+. .-...| ..-.|+...++.+|+|-|. ..|.|+...
T Consensus 124 d~~~~~~~~gyPr~i~~~w~Gvp---~~idaa~~~~g~~Yffkg~--------~y~~~~~~~ 174 (195)
T 1itv_A 124 DVKAQMVDPRSASEVDRMFPGVP---LDTHDVFQFREKAYFCQDR--------FYWRVSSRS 174 (195)
T ss_dssp ETTTTEECGGGCEEHHHHSTTSC---SSCSEEEEETTEEEEEETT--------EEEEEECCT
T ss_pred eCCcccccCCCccChhhcCCCCC---CCCCEEEEeCCeEEEEeCC--------EEEEEECCc
Confidence 99776110 0 0111 111111 1223444457999999763 456666543
No 229
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=47.02 E-value=2.7e+02 Score=28.99 Aligned_cols=137 Identities=12% Similarity=0.025 Sum_probs=70.0
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CC-EEEEEeCCCC---------------CC-----CCcccEEEEE
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GT-MVVIQGGIGP---------------AG-----LSAEDLHVLD 207 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~-~lyVfGG~~~---------------~~-----~~~~dv~~~D 207 (998)
..+|++|+.+.+...+... +. ..+.+.. ++ .|++...... .+ .....++++|
T Consensus 85 ~~l~~~~~~~g~~~~l~~~---~~---~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d 158 (347)
T 2gop_A 85 SEIWVADLETLSSKKILEA---KN---IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFD 158 (347)
T ss_dssp EEEEEEETTTTEEEEEEEE---SE---EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEE
T ss_pred ceEEEEECCCCceEEEEcC---CC---ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEE
Confidence 4699999999888777543 11 1222222 33 4444432100 00 1135799999
Q ss_pred cCCCCCce-EEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCC---C-cccEEEEECCCCCceEEEcccCCCCCCCcc
Q 001901 208 LTQQRPRW-HRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKR---P-LADVWALDTAAKPYEWRKLEPEGEGPPPCM 282 (998)
Q Consensus 208 l~t~t~~W-~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~---~-lndv~~yD~~s~~~~W~~v~~~~~~P~~r~ 282 (998)
+.+. +. ..+.. + .....+...++ +++.+..+... . ..++|.+| +. ++..+... .
T Consensus 159 ~~~~--~~~~~l~~----~---~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~--~~~~l~~~-------~ 217 (347)
T 2gop_A 159 TESE--EVIEEFEK----P---RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DG--KEEKMFEK-------V 217 (347)
T ss_dssp TTTT--EEEEEEEE----E---TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TT--EEEEEEEE-------E
T ss_pred CCCC--eEEeeecC----C---CcccccCCCCe-EEEEEecccccccccccccEEEeC--CC--ceEEeccC-------c
Confidence 9875 34 44441 2 33344455665 55555443221 2 46899999 55 67666432 1
Q ss_pred ceEEEEEeCCEEEEEeccCCC--CCCcccEEEEe
Q 001901 283 YATASARSDGLLLLCGGRDAS--SVPLASAYGLA 314 (998)
Q Consensus 283 ~~~a~~~~~~~lyvfGG~~~~--~~~~~dv~~~~ 314 (998)
..... ..+++.+++.+.... ......+|.++
T Consensus 218 ~~~~~-spdg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 218 SFYAV-DSDGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp SEEEE-EECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred ceeeE-CCCCCEEEEEEccccCCccccceEEEEC
Confidence 11222 446655555543321 11245677777
No 230
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=47.00 E-value=4.4e+02 Score=31.47 Aligned_cols=192 Identities=10% Similarity=0.034 Sum_probs=92.7
Q ss_pred cCCcEEEEECCCCcEEEecCCCCCC--CCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCC----CCceE---E
Q 001901 148 ATADVHCYDVLTNKWSRITPFGEPP--TPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQ----RPRWH---R 217 (998)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P--~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~----t~~W~---~ 217 (998)
...-+++||+.+++++......... ....-++.+.. ++.|+|.. .+ .-+++||..+. ...+. .
T Consensus 390 t~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT-~~------~Gl~~~~~~~~~~~~~~~~~~~~~ 462 (758)
T 3ott_A 390 TDGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWIST-CL------GGIFVVDKHKLMQSTSGQYIAEQN 462 (758)
T ss_dssp ETTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEEE-SS------SCEEEEEHHHHHHCCSSEEECSEE
T ss_pred eCCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEE-CC------CceEEEccccccccCCcceecccc
Confidence 3456888999999888764211101 11122333333 34777742 11 24778886531 00121 1
Q ss_pred eeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEE-EeCCEEEE
Q 001901 218 VVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASA-RSDGLLLL 296 (998)
Q Consensus 218 l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~-~~~~~lyv 296 (998)
......++.. .-.+++.-.++.||++||.. +-+++||+.+. +++.+..... + ......+.. -.++.||+
T Consensus 463 ~~~~~~l~~~-~i~~i~~d~~g~lWi~~~t~-----~Gl~~~d~~~~--~~~~~~~~~~-~-~~~~~~~i~~d~~g~lWi 532 (758)
T 3ott_A 463 YSVHNGLSGM-FINQIIPDNEGNVWVLLYNN-----KGIDKINPRTR--EVTKLFADEL-T-GEKSPNYLLCDEDGLLWV 532 (758)
T ss_dssp ECGGGTCSCS-CEEEEEECTTSCEEEEETTC-----SSEEEEETTTT--EEEEECTTTS-C-GGGCEEEEEECTTSCEEE
T ss_pred cccccccccc-eeeeEEEcCCCCEEEEccCC-----CCcEEEeCCCC--ceEEecCCCc-C-CCcccceEEECCCCCEEE
Confidence 1111122221 12223333445799866653 24899999988 7877642211 1 111112222 24678887
Q ss_pred EeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEE
Q 001901 297 CGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (998)
Q Consensus 297 fGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~ 376 (998)
.. . .-++.|++... .+......+. |. ..-.+++.-++.|++... +-+..||+++.+..
T Consensus 533 gt-~-------~Gl~~~~~~~~-~~~~~~~~gl-~~-~~i~~i~~~~g~lWi~t~-----------~Gl~~~~~~~~~~~ 590 (758)
T 3ott_A 533 GF-H-------GGVMRINPKDE-SQQSISFGSF-SN-NEILSMTCVKNSIWVSTT-----------NGLWIIDRKTMDAR 590 (758)
T ss_dssp EE-T-------TEEEEECC--C-CCCBCCCCC-----CCEEEEEEETTEEEEEES-----------SCEEEEETTTCCEE
T ss_pred Ee-c-------CceEEEecCCC-ceEEecccCC-Cc-cceEEEEECCCCEEEECC-----------CCeEEEcCCCceeE
Confidence 43 1 13566665543 2221111222 21 223344445788887542 23889999998876
Q ss_pred Ec
Q 001901 377 DT 378 (998)
Q Consensus 377 ~v 378 (998)
..
T Consensus 591 ~~ 592 (758)
T 3ott_A 591 QQ 592 (758)
T ss_dssp EC
T ss_pred Ee
Confidence 54
No 231
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=46.94 E-value=2.7e+02 Score=28.96 Aligned_cols=69 Identities=12% Similarity=0.280 Sum_probs=35.0
Q ss_pred CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcc-cEEEEECC--cEEEEEcCCCCCCCcccEEEEEC
Q 001901 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYG-HVMALVGQ--RYLMAIGGNDGKRPLADVWALDT 261 (998)
Q Consensus 185 ~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~-hs~~~~~~--~~Lyv~GG~~g~~~lndv~~yD~ 261 (998)
+.+++.|+.+ ..+.+||+.+. +|..+... ...... .+++...+ +.+++.|+.++ .+..+|+
T Consensus 71 ~~~l~s~s~D------~~v~iWd~~~~--~~~~~~~~---~~h~~~V~~v~~~p~~~g~~lasgs~D~-----~i~lwd~ 134 (316)
T 3bg1_A 71 GNILASCSYD------RKVIIWREENG--TWEKSHEH---AGHDSSVNSVCWAPHDYGLILACGSSDG-----AISLLTY 134 (316)
T ss_dssp SSCEEEEETT------SCEEEECCSSS--CCCEEEEE---CCCSSCCCEEEECCTTTCSCEEEECSSS-----CEEEEEE
T ss_pred CCEEEEEECC------CEEEEEECCCC--cceEEEEc---cCCCCceEEEEECCCCCCcEEEEEcCCC-----CEEEEec
Confidence 4566666642 46889998875 35444321 111111 22222222 35777787765 4556666
Q ss_pred CCCCceEEE
Q 001901 262 AAKPYEWRK 270 (998)
Q Consensus 262 ~s~~~~W~~ 270 (998)
.+.. .|..
T Consensus 135 ~~~~-~~~~ 142 (316)
T 3bg1_A 135 TGEG-QWEV 142 (316)
T ss_dssp CSSS-CEEE
T ss_pred CCCC-Ccce
Confidence 5431 4643
No 232
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=46.20 E-value=2.4e+02 Score=28.26 Aligned_cols=105 Identities=11% Similarity=0.195 Sum_probs=55.1
Q ss_pred CCEEEEEeCCCCCCCCcccEEEEEcCCCCCce-EEeeecCCCCCC--CcccEEEEE-CCcEEEEEcCCCCCCCcccEEEE
Q 001901 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRW-HRVVVQGPGPGP--RYGHVMALV-GQRYLMAIGGNDGKRPLADVWAL 259 (998)
Q Consensus 184 ~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W-~~l~~~g~~P~~--R~~hs~~~~-~~~~Lyv~GG~~g~~~lndv~~y 259 (998)
++++|+|=| +.+|+|+-.+....+ ..+... .+|.. ... ++... .++++|+|-| +..|+|
T Consensus 79 ~~~iyfFkG--------~~~w~~~~~~~~~gyPk~I~~~-GlP~~~~~ID-AA~~~~~~gk~yfFkG-------~~ywr~ 141 (207)
T 1pex_A 79 HDLIFIFRG--------RKFWALNGYDILEGYPKKISEL-GLPKEVKKIS-AAVHFEDTGKTLLFSG-------NQVWRY 141 (207)
T ss_dssp TTEEEEEET--------TEEEEESTTCCCTTCSEESTTT-TCCTTCCCCC-EEEECTTTSEEEEEET-------TEEEEE
T ss_pred CCcEEEEcc--------CEEEEEeCCeeccCCceecccc-CCCCCCcccc-EEEEeCCCCEEEEEeC-------CEEEEE
Confidence 479999977 368888743321111 122211 13431 223 23333 3458999987 578999
Q ss_pred ECCCCCceEEEcccCC------CCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCC
Q 001901 260 DTAAKPYEWRKLEPEG------EGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRD 318 (998)
Q Consensus 260 D~~s~~~~W~~v~~~~------~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~ 318 (998)
|..++ + +.... .-|.......|+...++++|+|-| +..|.|+....
T Consensus 142 d~~~~--~---~d~gyPr~i~~~~~Gip~~iDaAf~~~g~~YfFkg--------~~y~rf~~~~~ 193 (207)
T 1pex_A 142 DDTNH--I---MDKDYPRLIEEDFPGIGDKVDAVYEKNGYIYFFNG--------PIQFEYSIWSN 193 (207)
T ss_dssp ETTTT--E---ECSSCCCBHHHHSTTSCSCCSEEEEETTEEEEEET--------TEEEEEETTTT
T ss_pred eCcCc--c---ccCCCCccHHHcCCCCCCCccEEEEcCCcEEEEEC--------CEEEEEeCCcc
Confidence 99765 2 11100 001111122334456999999966 34677766544
No 233
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=45.37 E-value=3.6e+02 Score=31.71 Aligned_cols=65 Identities=15% Similarity=0.244 Sum_probs=34.7
Q ss_pred EEEEEeCCCCCCCCcccEEEEEcCCCCCceEEe--eecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCC
Q 001901 186 MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRV--VVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (998)
Q Consensus 186 ~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l--~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s 263 (998)
.+++.|+.+ ..+.+||+.+....+... ...|. ...-.+++...++.+++.|+.++ .+..+|+.+
T Consensus 396 ~~l~s~s~D------~~i~~W~~~~~~~~~~~~~~~~~~h---~~~v~~v~~s~~g~~l~sgs~Dg-----~v~vwd~~~ 461 (694)
T 3dm0_A 396 DIIVSASRD------KSIILWKLTKDDKAYGVAQRRLTGH---SHFVEDVVLSSDGQFALSGSWDG-----ELRLWDLAA 461 (694)
T ss_dssp SEEEEEETT------SEEEEEECCCSTTCSCEEEEEEECC---SSCEEEEEECTTSSEEEEEETTS-----EEEEEETTT
T ss_pred CEEEEEeCC------CcEEEEEccCCCcccccccceecCC---CCcEEEEEECCCCCEEEEEeCCC-----cEEEEECCC
Confidence 566667642 468888887642122111 11111 11112333334446777787764 678889887
Q ss_pred C
Q 001901 264 K 264 (998)
Q Consensus 264 ~ 264 (998)
.
T Consensus 462 ~ 462 (694)
T 3dm0_A 462 G 462 (694)
T ss_dssp T
T ss_pred C
Confidence 6
No 234
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=45.22 E-value=3e+02 Score=29.10 Aligned_cols=176 Identities=10% Similarity=0.139 Sum_probs=83.8
Q ss_pred CCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEEC
Q 001901 159 TNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVG 237 (998)
Q Consensus 159 t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~ 237 (998)
-.+|+.+......| -..+.++.. ++.+|+.|.. ..+++-+-... .|+.+.. +....-+.++...
T Consensus 108 G~tW~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~-------g~v~~S~DgG~--tW~~~~~----~~~~~~~~~~~~~ 172 (327)
T 2xbg_A 108 GQSWSQIPLDPKLP--GSPRLIKALGNGSAEMITNV-------GAIYRTKDSGK--NWQALVQ----EAIGVMRNLNRSP 172 (327)
T ss_dssp TSSCEECCCCTTCS--SCEEEEEEEETTEEEEEETT-------CCEEEESSTTS--SEEEEEC----SCCCCEEEEEECT
T ss_pred CCCceECccccCCC--CCeEEEEEECCCCEEEEeCC-------ccEEEEcCCCC--CCEEeec----CCCcceEEEEEcC
Confidence 46799886431112 122344433 5688887742 12444322223 4998862 2223344555555
Q ss_pred CcEEEEEcCCCCCCCcccEEEEECC-CCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecC
Q 001901 238 QRYLMAIGGNDGKRPLADVWALDTA-AKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKH 316 (998)
Q Consensus 238 ~~~Lyv~GG~~g~~~lndv~~yD~~-s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~ 316 (998)
++.+|++|- .+ .+++-+-. -. +|+.+... .....+..+...++.+|+.+.. + .++.....
T Consensus 173 ~~~~~~~g~-~G-----~~~~S~d~gG~--tW~~~~~~----~~~~~~~~~~~~~g~~~~~~~~---G----~~~~s~~D 233 (327)
T 2xbg_A 173 SGEYVAVSS-RG-----SFYSTWEPGQT--AWEPHNRT----TSRRLHNMGFTPDGRLWMIVNG---G----KIAFSDPD 233 (327)
T ss_dssp TSCEEEEET-TS-----SEEEEECTTCS--SCEEEECC----SSSCEEEEEECTTSCEEEEETT---T----EEEEEETT
T ss_pred CCcEEEEEC-CC-----cEEEEeCCCCC--ceeECCCC----CCCccceeEECCCCCEEEEeCC---c----eEEEecCC
Confidence 556666653 22 34544322 34 89887432 2233344444457788877642 1 12222111
Q ss_pred CCCeEEEEECCCC-CCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEccc
Q 001901 317 RDGRWEWAIAPGV-SPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKS 380 (998)
Q Consensus 317 ~~~~W~w~~~~g~-~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~ 380 (998)
...+| ...... .+.....++++.. ++.+|+.|+. ..+++-.-.-.+|+.+..
T Consensus 234 ~G~tW--~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~----------g~i~~S~DgG~tW~~~~~ 287 (327)
T 2xbg_A 234 NSENW--GELLSPLRRNSVGFLDLAYRTPNEVWLAGGA----------GALLCSQDGGQTWQQDVD 287 (327)
T ss_dssp EEEEE--CCCBCTTSSCCSCEEEEEESSSSCEEEEEST----------TCEEEESSTTSSCEECGG
T ss_pred CCCee--EeccCCcccCCcceEEEEecCCCEEEEEeCC----------CeEEEeCCCCcccEEcCc
Confidence 11234 443311 1122223344443 5678888762 125444334678998764
No 235
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=45.13 E-value=2.4e+02 Score=28.87 Aligned_cols=180 Identities=13% Similarity=0.046 Sum_probs=0.0
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCc
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~ 229 (998)
+.+++||+.+.+....-.. +..-...+...-++.+|+. ..++++||+.+. +-......+..+.+.
T Consensus 115 ~~i~v~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~~~---------~~~i~~~d~~~~--~~~~~~~~~~~~~~~- 179 (337)
T 1pby_B 115 TRVALYDAETLSRRKAFEA---PRQITMLAWARDGSKLYGL---------GRDLHVMDPEAG--TLVEDKPIQSWEAET- 179 (337)
T ss_dssp CEEEEEETTTTEEEEEEEC---CSSCCCEEECTTSSCEEEE---------SSSEEEEETTTT--EEEEEECSTTTTTTT-
T ss_pred ceEEEEECCCCcEEEEEeC---CCCcceeEECCCCCEEEEe---------CCeEEEEECCCC--cEeeeeeccccCCCc-
Q ss_pred ccEEEEECCcEEEEEcCCCCC------------------CCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeC
Q 001901 230 GHVMALVGQRYLMAIGGNDGK------------------RPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSD 291 (998)
Q Consensus 230 ~hs~~~~~~~~Lyv~GG~~g~------------------~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~ 291 (998)
...-.+..+|+.+...+. .....++.||+.+....-..+..... .....+...+
T Consensus 180 ---~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~-----~~~~~~~s~d 251 (337)
T 1pby_B 180 ---YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDV-----FYFSTAVNPA 251 (337)
T ss_dssp ---BCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSS-----CEEEEEECTT
T ss_pred ---eeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCC-----ceeeEEECCC
Q ss_pred CEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECC
Q 001901 292 GLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTA 371 (998)
Q Consensus 292 ~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~ 371 (998)
++.++++ ...++.|+.... +....... .......+..-+++.+++++. .+.+.+||+.
T Consensus 252 g~~l~~~--------~~~v~~~d~~~~---~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~---------~~~i~v~d~~ 309 (337)
T 1pby_B 252 KTRAFGA--------YNVLESFDLEKN---ASIKRVPL--PHSYYSVNVSTDGSTVWLGGA---------LGDLAAYDAE 309 (337)
T ss_dssp SSEEEEE--------ESEEEEEETTTT---EEEEEEEC--SSCCCEEEECTTSCEEEEESB---------SSEEEEEETT
T ss_pred CCEEEEe--------CCeEEEEECCCC---cCcceecC--CCceeeEEECCCCCEEEEEcC---------CCcEEEEECc
Q ss_pred CCe
Q 001901 372 AGV 374 (998)
Q Consensus 372 t~~ 374 (998)
+.+
T Consensus 310 ~~~ 312 (337)
T 1pby_B 310 TLE 312 (337)
T ss_dssp TCC
T ss_pred CCc
No 236
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=44.42 E-value=23 Score=41.37 Aligned_cols=24 Identities=17% Similarity=0.444 Sum_probs=18.1
Q ss_pred CHHHHHHHHHHcCCc--EEEEccccc
Q 001901 883 GPDRVMEFCNNNDLQ--LIVRAHECV 906 (998)
Q Consensus 883 g~~~~~~fl~~~~l~--~iiR~H~~~ 906 (998)
..+.+..+|++++++ +++-||.=.
T Consensus 358 ~R~~Ll~~l~~~~v~n~vvLsGDvH~ 383 (527)
T 2yeq_A 358 QRERVINFIKSKNLNNVVVLTGDVHA 383 (527)
T ss_dssp HHHHHHHHHHHTTCCCEEEEECSSSS
T ss_pred HHHHHHHHHHHhCCCCEEEEEcchHH
Confidence 356788899999985 777788643
No 237
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=44.20 E-value=2.9e+02 Score=28.59 Aligned_cols=129 Identities=12% Similarity=0.088 Sum_probs=64.2
Q ss_pred cEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccE
Q 001901 231 HVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASA 310 (998)
Q Consensus 231 hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv 310 (998)
.+.+.-.++.||+.+..+ ..+++||+.+. ++..+..... ..-...+.-.++++|+....+.. ....+
T Consensus 48 ~~~~~~~~g~l~~~~~~~-----~~i~~~d~~~~--~~~~~~~~~~----~~~~~i~~~~dg~l~v~~~~~~~--~~~~i 114 (333)
T 2dg1_A 48 EGLNFDRQGQLFLLDVFE-----GNIFKINPETK--EIKRPFVSHK----ANPAAIKIHKDGRLFVCYLGDFK--STGGI 114 (333)
T ss_dssp EEEEECTTSCEEEEETTT-----CEEEEECTTTC--CEEEEEECSS----SSEEEEEECTTSCEEEEECTTSS--SCCEE
T ss_pred cCcEECCCCCEEEEECCC-----CEEEEEeCCCC--cEEEEeeCCC----CCcceEEECCCCcEEEEeCCCCC--CCceE
Confidence 344444455788876543 37899999887 5555432111 11222223347788887543211 12457
Q ss_pred EEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEc
Q 001901 311 YGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (998)
Q Consensus 311 ~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v 378 (998)
+.++.... ........ . .....-..+++. ++++|+........ .....++.||+.+.+...+
T Consensus 115 ~~~d~~~~-~~~~~~~~-~-~~~~~~~~i~~d~~g~l~v~~~~~~~~---~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 115 FAATENGD-NLQDIIED-L-STAYCIDDMVFDSKGGFYFTDFRGYST---NPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp EEECTTSC-SCEEEECS-S-SSCCCEEEEEECTTSCEEEEECCCBTT---BCCEEEEEECTTSCCEEEE
T ss_pred EEEeCCCC-EEEEEEcc-C-ccCCcccceEECCCCCEEEEecccccc---CCCceEEEEeCCCCEEEEe
Confidence 77766543 22211111 1 111122223332 56788754321110 1245699999988776654
No 238
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=44.12 E-value=3e+02 Score=29.05 Aligned_cols=130 Identities=10% Similarity=0.076 Sum_probs=62.6
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
.+.++|..+..+..+.... .....-..+.+ ++.+++.|+.+ ..+.+||+.+.. .+..+... ....
T Consensus 84 ~v~iw~~~~~~~~~~~~~~---~h~~~v~~v~~sp~~~~l~s~s~D------~~v~iwd~~~~~-~~~~~~~~---~~h~ 150 (345)
T 3fm0_A 84 TTCIWKKNQDDFECVTTLE---GHENEVKSVAWAPSGNLLATCSRD------KSVWVWEVDEED-EYECVSVL---NSHT 150 (345)
T ss_dssp CEEEEEECCC-EEEEEEEC---CCSSCEEEEEECTTSSEEEEEETT------SCEEEEEECTTS-CEEEEEEE---CCCC
T ss_pred cEEEEEccCCCeEEEEEcc---CCCCCceEEEEeCCCCEEEEEECC------CeEEEEECCCCC-CeEEEEEe---cCcC
Confidence 5667777777665443321 00111122222 34666667642 468899987642 34433321 1111
Q ss_pred cc-cEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCC
Q 001901 229 YG-HVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (998)
Q Consensus 229 ~~-hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~ 302 (998)
.. .+++...++.+++.|+.++ .+..||..+. .|..+.....- ...-...+...++.+++.|+.++
T Consensus 151 ~~v~~~~~~p~~~~l~s~s~d~-----~i~~w~~~~~--~~~~~~~~~~h--~~~v~~l~~sp~g~~l~s~s~D~ 216 (345)
T 3fm0_A 151 QDVKHVVWHPSQELLASASYDD-----TVKLYREEED--DWVCCATLEGH--ESTVWSLAFDPSGQRLASCSDDR 216 (345)
T ss_dssp SCEEEEEECSSSSCEEEEETTS-----CEEEEEEETT--EEEEEEEECCC--SSCEEEEEECTTSSEEEEEETTS
T ss_pred CCeEEEEECCCCCEEEEEeCCC-----cEEEEEecCC--CEEEEEEecCC--CCceEEEEECCCCCEEEEEeCCC
Confidence 11 1222333446777777665 4677888777 77644322110 01111122233667777777654
No 239
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=44.12 E-value=2.8e+02 Score=28.42 Aligned_cols=64 Identities=9% Similarity=0.180 Sum_probs=32.9
Q ss_pred CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEEC-C--cEEEEEcCCCCCCCcccEEEEEC
Q 001901 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVG-Q--RYLMAIGGNDGKRPLADVWALDT 261 (998)
Q Consensus 185 ~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~-~--~~Lyv~GG~~g~~~lndv~~yD~ 261 (998)
+.+++.|+.+ ..+.+||+.+. +|..+... ......-..+.+. + +.+++.|+.++ .+..||+
T Consensus 67 g~~l~s~s~D------~~v~iWd~~~~--~~~~~~~~---~~h~~~v~~v~~~p~~~g~~l~s~s~d~-----~v~~wd~ 130 (297)
T 2pm7_B 67 GTILASCSYD------GKVMIWKEENG--RWSQIAVH---AVHSASVNSVQWAPHEYGPMLLVASSDG-----KVSVVEF 130 (297)
T ss_dssp CSEEEEEETT------TEEEEEEBSSS--CBCCCEEE---CCCSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEEB
T ss_pred CCEEEEEcCC------CEEEEEEcCCC--ceEEEEEe---ecCCCceeEEEeCcCCCCcEEEEEECCC-----cEEEEEe
Confidence 4566666642 46888998765 25443311 1111112223332 1 24677777664 5667777
Q ss_pred CCC
Q 001901 262 AAK 264 (998)
Q Consensus 262 ~s~ 264 (998)
.+.
T Consensus 131 ~~~ 133 (297)
T 2pm7_B 131 KEN 133 (297)
T ss_dssp CSS
T ss_pred cCC
Confidence 554
No 240
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=43.85 E-value=5.7e+02 Score=31.87 Aligned_cols=180 Identities=8% Similarity=0.006 Sum_probs=85.6
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCC--C
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG--P 227 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~--~ 227 (998)
..+|.+|+.......+..... ....+..-+++.++++. ...++++|+... +...+. +..+. .
T Consensus 226 ~~l~~~~~~g~~~~~l~~~~~-----~~~~~~SpDG~~la~~~-------~~~i~~~d~~~~--~l~~l~--~~~~~~~~ 289 (1045)
T 1k32_A 226 GQIYSTDLDGKDLRKHTSFTD-----YYPRHLNTDGRRILFSK-------GGSIYIFNPDTE--KIEKIE--IGDLESPE 289 (1045)
T ss_dssp CEEEEEETTSCSCEECCCCCS-----SCEEEEEESSSCEEEEE-------TTEEEEECTTTC--CEEECC--CCCCCBCC
T ss_pred eEEEEEeCCCCcceEecCCCC-----cceeeEcCCCCEEEEEe-------CCEEEEecCCce--Eeeeec--cCcccccc
Confidence 468888887766666544321 11112222444444442 247899998543 233322 11100 0
Q ss_pred ------CcccEEEEE-CCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEecc
Q 001901 228 ------RYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 300 (998)
Q Consensus 228 ------R~~hs~~~~-~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~ 300 (998)
..-..+..- .+++.++++. -..++.+|..+. ....+..... ......... +++.+++++.
T Consensus 290 ~~~~~~~~v~~~~~S~pdG~~la~~~------~~~i~~~~~~~~--~~~~~~~~~~----~~~~~~~~s-dg~~l~~~s~ 356 (1045)
T 1k32_A 290 DRIISIPSKFAEDFSPLDGDLIAFVS------RGQAFIQDVSGT--YVLKVPEPLR----IRYVRRGGD-TKVAFIHGTR 356 (1045)
T ss_dssp SEEEECGGGGEEEEEECGGGCEEEEE------TTEEEEECTTSS--BEEECSCCSC----EEEEEECSS-SEEEEEEEET
T ss_pred cccccccccceeeecCCCCCEEEEEE------cCEEEEEcCCCC--ceEEccCCCc----ceEEeeeEc-CCCeEEEEEC
Confidence 122344444 4444444443 247888888776 5444432111 011112223 5555555543
Q ss_pred CCCCCCcccEE-EEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEc
Q 001901 301 DASSVPLASAY-GLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (998)
Q Consensus 301 ~~~~~~~~dv~-~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v 378 (998)
...+| .++.... . .....+. ... ....++. +++.+++++. ...++++|+++.+-..+
T Consensus 357 ------~~~l~~~~d~~~~-~--~~~l~~~--~~~-~~~~~~SpDG~~la~~~~---------~~~v~~~d~~tg~~~~~ 415 (1045)
T 1k32_A 357 ------EGDFLGIYDYRTG-K--AEKFEEN--LGN-VFAMGVDRNGKFAVVAND---------RFEIMTVDLETGKPTVI 415 (1045)
T ss_dssp ------TEEEEEEEETTTC-C--EEECCCC--CCS-EEEEEECTTSSEEEEEET---------TSEEEEEETTTCCEEEE
T ss_pred ------CCceEEEEECCCC-C--ceEecCC--ccc-eeeeEECCCCCEEEEECC---------CCeEEEEECCCCceEEe
Confidence 23566 5554433 2 2222211 112 2223332 5666666543 24699999999887665
Q ss_pred c
Q 001901 379 K 379 (998)
Q Consensus 379 ~ 379 (998)
.
T Consensus 416 ~ 416 (1045)
T 1k32_A 416 E 416 (1045)
T ss_dssp E
T ss_pred c
Confidence 4
No 241
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=43.66 E-value=2.9e+02 Score=28.36 Aligned_cols=62 Identities=19% Similarity=0.276 Sum_probs=33.8
Q ss_pred EEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 186 MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 186 ~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
.+++.|+.+ ..+.+||+.+.. ..... .+ ....-.+++...++.+++.|+.++ .+..||+.+.
T Consensus 186 ~~~~s~~~d------~~i~i~d~~~~~--~~~~~-~~---h~~~v~~~~~s~~~~~l~s~s~Dg-----~i~iwd~~~~ 247 (340)
T 4aow_A 186 PIIVSCGWD------KLVKVWNLANCK--LKTNH-IG---HTGYLNTVTVSPDGSLCASGGKDG-----QAMLWDLNEG 247 (340)
T ss_dssp CEEEEEETT------SCEEEEETTTTE--EEEEE-CC---CSSCEEEEEECTTSSEEEEEETTC-----EEEEEETTTT
T ss_pred cEEEEEcCC------CEEEEEECCCCc--eeeEe-cC---CCCcEEEEEECCCCCEEEEEeCCC-----eEEEEEeccC
Confidence 555666542 458899998752 21111 11 111112333334446778888765 5778888776
No 242
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=42.73 E-value=1.7e+02 Score=32.27 Aligned_cols=22 Identities=0% Similarity=0.001 Sum_probs=14.5
Q ss_pred CcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 238 QRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 238 ~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
++..++.|+.++ .+..||+.+.
T Consensus 307 dg~~l~s~~~D~-----~i~iwd~~~~ 328 (435)
T 4e54_B 307 DGARLLTTDQKS-----EIRVYSASQW 328 (435)
T ss_dssp TSSEEEEEESSS-----CEEEEESSSS
T ss_pred CCCeeEEEcCCC-----EEEEEECCCC
Confidence 335667777664 5777888665
No 243
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=42.37 E-value=29 Score=36.40 Aligned_cols=67 Identities=12% Similarity=0.081 Sum_probs=43.9
Q ss_pred CCeEEEecCCCC--HHHHHHHHHHcCCCCCCCCccceeEEE-eccccCCCCChHHHHHHHHHhhhcCCCcEEEeecCccc
Q 001901 698 APIKIFGDLHGQ--FGDLMRLFDEYGSPSTAGDIAYIDYLF-LGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEA 774 (998)
Q Consensus 698 ~~i~vvGDiHG~--~~dL~~il~~~g~~~~~~~~~~~~~vf-LGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~ 774 (998)
.+|..+|||=|. +..+...|..+.... + -+|+ -||....-..+.+....|..+.. .+ +..||||.
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l~~lr~~~-d------~vi~ngen~~~G~g~~~~~~~~l~~~G~----D~-~T~GNHef 68 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPDIRDRY-D------LVIANGENAARGKGLDRRSYRLLREAGV----DL-VSLGNHAW 68 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGGGC-S------EEEEECTTTTTTSSCCHHHHHHHHHHTC----CE-EECCTTTT
T ss_pred CEEEEEEecCCcccHHHHHHHHHHHHhhC-C------EEEEeCCCccCCCCcCHHHHHHHHhCCC----CE-EEeccEee
Confidence 368899999776 567777777764322 1 3444 56665443467788888888753 34 45599998
Q ss_pred cc
Q 001901 775 AD 776 (998)
Q Consensus 775 ~~ 776 (998)
-.
T Consensus 69 D~ 70 (252)
T 2z06_A 69 DH 70 (252)
T ss_dssp SC
T ss_pred EC
Confidence 54
No 244
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=42.00 E-value=2.2e+02 Score=31.23 Aligned_cols=63 Identities=16% Similarity=0.130 Sum_probs=36.1
Q ss_pred cccEEEEECCcEEEEEcCCC----CCCCcccEEEEE----CCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEecc
Q 001901 229 YGHVMALVGQRYLMAIGGND----GKRPLADVWALD----TAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 300 (998)
Q Consensus 229 ~~hs~~~~~~~~Lyv~GG~~----g~~~lndv~~yD----~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~ 300 (998)
..|++++..++.+|.+|-.. +.....+...-- +... +...+.. ...|++++..++++|.+|-.
T Consensus 274 ~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~--~v~~ia~-------G~~h~~al~~~G~v~~wG~n 344 (389)
T 3kci_A 274 SQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK--KVIAIAT-------GSLHCVCCTEDGEVYTWGDN 344 (389)
T ss_dssp TTEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTC--CEEEEEE-------CSSEEEEEETTCCEEEEECC
T ss_pred CCEEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEeccCCCC--CEEEEEe-------ccCeEEEECCCCCEEEeeCC
Confidence 57888888888999999642 211111111110 1111 2333332 24577777788999999854
No 245
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=41.89 E-value=2.8e+02 Score=27.80 Aligned_cols=180 Identities=8% Similarity=-0.048 Sum_probs=88.6
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCc
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~ 229 (998)
.+++||+. .++..+... .....-++++.. ++.+|+.... ...+++||. +. +........ ....
T Consensus 79 ~i~~~~~~-g~~~~~~~~---~~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~d~-~g--~~~~~~~~~---~~~~ 142 (299)
T 2z2n_A 79 KIGRITKK-GIIKEYTLP---NPDSAPYGITEGPNGDIWFTEMN------GNRIGRITD-DG--KIREYELPN---KGSY 142 (299)
T ss_dssp EEEEECTT-SCEEEEECS---STTCCEEEEEECTTSCEEEEETT------TTEEEEECT-TC--CEEEEECSS---TTCC
T ss_pred eEEEECCC-CcEEEEeCC---CcCCCceeeEECCCCCEEEEecC------CceEEEECC-CC--CEEEecCCC---CCCC
Confidence 57788876 455544321 011223445444 3578876532 246889998 33 244433111 1222
Q ss_pred ccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCccc
Q 001901 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLAS 309 (998)
Q Consensus 230 ~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~d 309 (998)
-+.++.-.++.+|+.... .+.+++||+ +. +...+..... ...-...+.-.++.+|+.... .+.
T Consensus 143 ~~~i~~~~~g~l~v~~~~-----~~~i~~~~~-~g--~~~~~~~~~~---~~~~~~i~~~~~g~l~v~~~~------~~~ 205 (299)
T 2z2n_A 143 PSFITLGSDNALWFTENQ-----NNAIGRITE-SG--DITEFKIPTP---ASGPVGITKGNDDALWFVEII------GNK 205 (299)
T ss_dssp EEEEEECTTSCEEEEETT-----TTEEEEECT-TC--CEEEEECSST---TCCEEEEEECTTSSEEEEETT------TTE
T ss_pred CceEEEcCCCCEEEEeCC-----CCEEEEEcC-CC--cEEEeeCCCC---CCcceeEEECCCCCEEEEccC------Cce
Confidence 344444445578875421 246899999 66 4444311111 011112222235778886432 235
Q ss_pred EEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEc
Q 001901 310 AYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (998)
Q Consensus 310 v~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v 378 (998)
++.++. ++.+.....+.. ...-.++++. ++.+||.... .+.+++||+ +.+...+
T Consensus 206 i~~~~~--~g~~~~~~~~~~---~~~~~~i~~~~~g~l~v~~~~---------~~~i~~~d~-~g~~~~~ 260 (299)
T 2z2n_A 206 IGRITT--SGEITEFKIPTP---NARPHAITAGAGIDLWFTEWG---------ANKIGRLTS-NNIIEEY 260 (299)
T ss_dssp EEEECT--TCCEEEEECSST---TCCEEEEEECSTTCEEEEETT---------TTEEEEEET-TTEEEEE
T ss_pred EEEECC--CCcEEEEECCCC---CCCceeEEECCCCCEEEeccC---------CceEEEECC-CCceEEE
Confidence 677776 344443322211 1122233333 4678876421 345899998 4554443
No 246
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=41.32 E-value=3.8e+02 Score=29.18 Aligned_cols=66 Identities=12% Similarity=0.031 Sum_probs=34.5
Q ss_pred cccEEEEECCcEEEEEcCCC----CCCCcccEEEEECCC--CCceEEEcccCCCCCCCccceEEEEEeCCEEEEEec
Q 001901 229 YGHVMALVGQRYLMAIGGND----GKRPLADVWALDTAA--KPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGG 299 (998)
Q Consensus 229 ~~hs~~~~~~~~Lyv~GG~~----g~~~lndv~~yD~~s--~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG 299 (998)
..|++++..++.+|.+|-.. +.....+...--... ...+-..+... ....|+.++..++.+|.+|-
T Consensus 168 ~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G-----~g~~~t~~l~~~G~v~~wG~ 239 (389)
T 3kci_A 168 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG-----SGDAQTLCLTDDDTVWSWGD 239 (389)
T ss_dssp SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC-----CSSCEEEEEETTTEEEEEEC
T ss_pred cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEc-----CCCcEEEEEccCCEEEEEeC
Confidence 57888888888999999542 222111211110000 00012222111 01256777778999999984
No 247
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=41.19 E-value=5e+02 Score=30.44 Aligned_cols=181 Identities=12% Similarity=0.100 Sum_probs=81.8
Q ss_pred CCcEEEEECCCCcEEEe-cCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCC
Q 001901 149 TADVHCYDVLTNKWSRI-TPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (998)
Q Consensus 149 ~~dv~~yD~~t~~W~~l-~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~ 226 (998)
-..+.++|+.+..-... ... ... -.+++.. ++..++.|+.+ ..+.+||..... .+.... ....
T Consensus 451 Dg~v~vwd~~~~~~~~~~~~h----~~~-v~~~~~s~~~~~l~s~s~D------~~i~iwd~~~~~-~~~~~~---~~~~ 515 (694)
T 3dm0_A 451 DGELRLWDLAAGVSTRRFVGH----TKD-VLSVAFSLDNRQIVSASRD------RTIKLWNTLGEC-KYTISE---GGEG 515 (694)
T ss_dssp TSEEEEEETTTTEEEEEEECC----SSC-EEEEEECTTSSCEEEEETT------SCEEEECTTSCE-EEEECS---STTS
T ss_pred CCcEEEEECCCCcceeEEeCC----CCC-EEEEEEeCCCCEEEEEeCC------CEEEEEECCCCc-ceeecc---CCCC
Confidence 34688889887653322 111 001 1122222 34555666642 468888876531 122111 1111
Q ss_pred CCcccEEEEEC-Cc--EEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCC
Q 001901 227 PRYGHVMALVG-QR--YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDAS 303 (998)
Q Consensus 227 ~R~~hs~~~~~-~~--~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~ 303 (998)
.+..-.++.+. +. .+++.|+.++ .+..||+.+. +-...-.... ......+...++.+++.||.++.
T Consensus 516 h~~~v~~~~~~~~~~~~~l~s~s~d~-----~v~vwd~~~~--~~~~~~~~h~----~~v~~v~~spdg~~l~sg~~Dg~ 584 (694)
T 3dm0_A 516 HRDWVSCVRFSPNTLQPTIVSASWDK-----TVKVWNLSNC--KLRSTLAGHT----GYVSTVAVSPDGSLCASGGKDGV 584 (694)
T ss_dssp CSSCEEEEEECSCSSSCEEEEEETTS-----CEEEEETTTC--CEEEEECCCS----SCEEEEEECTTSSEEEEEETTSB
T ss_pred CCCcEEEEEEeCCCCcceEEEEeCCC-----eEEEEECCCC--cEEEEEcCCC----CCEEEEEEeCCCCEEEEEeCCCe
Confidence 22222233332 21 3566677654 5788898776 3222111101 11122223346788888876543
Q ss_pred CCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEE
Q 001901 304 SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (998)
Q Consensus 304 ~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~ 376 (998)
+..++.... ....... ....-+++++..+..+++++. ...+.+||+.+.+-.
T Consensus 585 ------i~iwd~~~~---~~~~~~~---~~~~v~~~~~sp~~~~l~~~~---------~~~i~iwd~~~~~~~ 636 (694)
T 3dm0_A 585 ------VLLWDLAEG---KKLYSLE---ANSVIHALCFSPNRYWLCAAT---------EHGIKIWDLESKSIV 636 (694)
T ss_dssp ------CEEEETTTT---EEEECCB---CSSCEEEEEECSSSSEEEEEE---------TTEEEEEETTTTEEE
T ss_pred ------EEEEECCCC---ceEEEec---CCCcEEEEEEcCCCcEEEEEc---------CCCEEEEECCCCCCh
Confidence 233333322 1111111 112234444444433444432 234889999887644
No 248
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=41.15 E-value=5.4e+02 Score=30.86 Aligned_cols=191 Identities=12% Similarity=0.063 Sum_probs=93.8
Q ss_pred cEEEEECCCCcEEEecCCCCCC----CCccceEEEEe-CCE-EEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecC-C
Q 001901 151 DVHCYDVLTNKWSRITPFGEPP----TPRAAHVATAV-GTM-VVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG-P 223 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P----~pR~~hsa~~~-~~~-lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g-~ 223 (998)
-+++||..+.+++........+ ....-++++.. ++. |+|. .. ..-+++||..+.. +....... .
T Consensus 378 Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWig-t~------~~Gl~~~d~~~~~--~~~~~~~~~~ 448 (795)
T 4a2l_A 378 GLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIG-TH------AGGLSILHRNSGQ--VENFNQRNSQ 448 (795)
T ss_dssp CEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEE-ET------TTEEEEEETTTCC--EEEECTTTSC
T ss_pred CeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEE-eC------cCceeEEeCCCCc--EEEeecCCCC
Confidence 6778888888888775321001 11222344443 345 6663 22 1358899988763 65554211 1
Q ss_pred CCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCC-CCCccceEE-EEEeCCEEEEEeccC
Q 001901 224 GPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEG-PPPCMYATA-SARSDGLLLLCGGRD 301 (998)
Q Consensus 224 ~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~-P~~r~~~~a-~~~~~~~lyvfGG~~ 301 (998)
++... -.+++.-.++.||+... +-+++||+.+. +|+........ ........+ ..-.++.||+...
T Consensus 449 l~~~~-v~~i~~d~~g~lwigt~-------~Gl~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-- 516 (795)
T 4a2l_A 449 LVNEN-VYAILPDGEGNLWLGTL-------SALVRFNPEQR--SFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-- 516 (795)
T ss_dssp CSCSC-EEEEEECSSSCEEEEES-------SCEEEEETTTT--EEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--
T ss_pred cCCCe-eEEEEECCCCCEEEEec-------CceeEEeCCCC--eEEEccccccccccCCceEEEEEECCCCCEEEEeC--
Confidence 22111 12222223346776432 24899999988 88877543110 000111122 2234678888542
Q ss_pred CCCCCcccEEEEecCCCCeEEEEECCCCCCCCc-ceeEEEE-ECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEcc
Q 001901 302 ASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPR-YQHAAVF-VNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTK 379 (998)
Q Consensus 302 ~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR-~~hsav~-~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~ 379 (998)
..++.|+.... .+...........+- .-.+.+. -++.|+|.. . .-++.||+.+.++....
T Consensus 517 ------~Gl~~~~~~~~-~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT-~----------~Gl~~~d~~~~~~~~~~ 578 (795)
T 4a2l_A 517 ------EGLSVFKQEGL-DIQKASILPVSNVTKLFTNCIYEASNGIIWVGT-R----------EGFYCFNEKDKQIKRYN 578 (795)
T ss_dssp ------SCEEEEEEETT-EEEECCCSCSCGGGGSCEEEEEECTTSCEEEEE-S----------SCEEEEETTTTEEEEEC
T ss_pred ------CceEEEeCCCC-eEEEecCCCCCCCCCCeeEEEEECCCCCEEEEe-C----------CCceeECCCCCcEEEeC
Confidence 23667766554 331110001100111 1122222 246777743 1 13889999999988765
Q ss_pred c
Q 001901 380 S 380 (998)
Q Consensus 380 ~ 380 (998)
.
T Consensus 579 ~ 579 (795)
T 4a2l_A 579 T 579 (795)
T ss_dssp G
T ss_pred C
Confidence 3
No 249
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=41.07 E-value=33 Score=36.11 Aligned_cols=66 Identities=17% Similarity=0.092 Sum_probs=42.1
Q ss_pred CCeEEEecCCCCH--HHHHHHHHHcCCCCCCCCccceeEEEeccccCCC-CChHHHHHHHHHhhhcCCCcEEEeecCccc
Q 001901 698 APIKIFGDLHGQF--GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRG-QHSLETITLLLALKVEYPNNVHLIRGNHEA 774 (998)
Q Consensus 698 ~~i~vvGDiHG~~--~dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG-~~s~evl~ll~~lk~~~p~~v~llrGNHE~ 774 (998)
.+|..+|||=|.. ..+..++.++.... + -+|+-|+-.--| ..+-+....|..+.. .+ +..||||.
T Consensus 1 m~ilf~GDv~g~~G~~~~~~~l~~lr~~~-d------~vi~nge~~~~G~g~~~~~~~~l~~~G~----Da-~TlGNHef 68 (255)
T 1t70_A 1 MRVLFIGDVFGQPGRRVLQNHLPTIRPQF-D------FVIVNMENSAGGFGMHRDAARGALEAGA----GC-LTLGNHAW 68 (255)
T ss_dssp CEEEEECCBBHHHHHHHHHHHHHHHGGGC-S------EEEEECTBTTTTSSCCHHHHHHHHHHTC----SE-EECCTTTT
T ss_pred CEEEEEeccCChHHHHHHHHHHHHHHhhC-C------EEEECCCCccCCcCCCHHHHHHHHhCCC----CE-EEeccccc
Confidence 3688999998874 56666777664221 1 455555555444 456677888877753 33 44499998
Q ss_pred c
Q 001901 775 A 775 (998)
Q Consensus 775 ~ 775 (998)
-
T Consensus 69 D 69 (255)
T 1t70_A 69 H 69 (255)
T ss_dssp S
T ss_pred c
Confidence 5
No 250
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=40.60 E-value=1.6e+02 Score=32.28 Aligned_cols=69 Identities=7% Similarity=-0.039 Sum_probs=40.2
Q ss_pred CCEEEEEeCCCC---CCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcE--EEEEcCCCCCCCcccEEE
Q 001901 184 GTMVVIQGGIGP---AGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRY--LMAIGGNDGKRPLADVWA 258 (998)
Q Consensus 184 ~~~lyVfGG~~~---~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~--Lyv~GG~~g~~~lndv~~ 258 (998)
++++||...... .....++++++|+.+. ..+. .++.+..-+.+.+-.+++ +|+..+. .+++.+
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~----~vv~---~i~~g~~p~~i~~s~Dg~~~l~v~~~~-----~~~V~V 345 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG----QTSS---QISLGHDVDAISVAQDGGPDLYALSAG-----TEVLHI 345 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCC----EEEE---EEECCCCcCeEEECCCCCeEEEEEcCC-----CCeEEE
Confidence 468999754221 1223478999999885 2333 223333445555554433 5554322 268999
Q ss_pred EECCCC
Q 001901 259 LDTAAK 264 (998)
Q Consensus 259 yD~~s~ 264 (998)
||+.+.
T Consensus 346 iD~~t~ 351 (373)
T 2mad_H 346 YDAGAG 351 (373)
T ss_pred EECCCC
Confidence 999876
No 251
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=40.43 E-value=3.6e+02 Score=28.53 Aligned_cols=175 Identities=11% Similarity=0.091 Sum_probs=83.4
Q ss_pred CCCcEEEecCCCCCCCCccceEEEEeC-CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCc-ccEEEE
Q 001901 158 LTNKWSRITPFGEPPTPRAAHVATAVG-TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY-GHVMAL 235 (998)
Q Consensus 158 ~t~~W~~l~~~g~~P~pR~~hsa~~~~-~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~-~hs~~~ 235 (998)
...+|+.+.. |....-.++...+ +.+|+.|-. .-+++-.-... .|+.+.... +.+.. -.++..
T Consensus 23 ~g~~W~~~~~----~~~~~~~~v~~~~~~~~~~~G~~-------g~i~~s~DgG~--tW~~~~~~~--~~~~~~~~~i~~ 87 (327)
T 2xbg_A 23 DYNPWEAIQL----PTTATILDMSFIDRHHGWLVGVN-------ATLMETRDGGQ--TWEPRTLVL--DHSDYRFNSVSF 87 (327)
T ss_dssp SSCCEEEEEC----SCSSCEEEEEESSSSCEEEEETT-------TEEEEESSTTS--SCEECCCCC--SCCCCEEEEEEE
T ss_pred CCCCceEeec----CCCCcEEEEEECCCCcEEEEcCC-------CeEEEeCCCCC--CCeECCCCC--CCCCccEEEEEe
Confidence 3467998863 2223333444433 477776532 12433321222 499885221 11222 223333
Q ss_pred ECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEec
Q 001901 236 VGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAK 315 (998)
Q Consensus 236 ~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~ 315 (998)
.. +.+|+.|. . ..+++-+-.-. +|+.+......|. .....+...++.+|+.|.. ..+|.-.+
T Consensus 88 ~~-~~~~~~g~-~-----g~i~~S~DgG~--tW~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~-------g~v~~S~D 149 (327)
T 2xbg_A 88 QG-NEGWIVGE-P-----PIMLHTTDGGQ--SWSQIPLDPKLPG--SPRLIKALGNGSAEMITNV-------GAIYRTKD 149 (327)
T ss_dssp ET-TEEEEEEE-T-----TEEEEESSTTS--SCEECCCCTTCSS--CEEEEEEEETTEEEEEETT-------CCEEEESS
T ss_pred cC-CeEEEEEC-C-----CeEEEECCCCC--CceECccccCCCC--CeEEEEEECCCCEEEEeCC-------ccEEEEcC
Confidence 34 47888752 2 23444322234 8999865322221 1222333457888887742 12333322
Q ss_pred CCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECC-CCeEEEccc
Q 001901 316 HRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTA-AGVWCDTKS 380 (998)
Q Consensus 316 ~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~-t~~W~~v~~ 380 (998)
. ..+|+..... .+...+++++. ++.++++|- . ..++.-+-. ..+|+.+..
T Consensus 150 g-G~tW~~~~~~----~~~~~~~~~~~~~~~~~~~g~-~---------G~~~~S~d~gG~tW~~~~~ 201 (327)
T 2xbg_A 150 S-GKNWQALVQE----AIGVMRNLNRSPSGEYVAVSS-R---------GSFYSTWEPGQTAWEPHNR 201 (327)
T ss_dssp T-TSSEEEEECS----CCCCEEEEEECTTSCEEEEET-T---------SSEEEEECTTCSSCEEEEC
T ss_pred C-CCCCEEeecC----CCcceEEEEEcCCCcEEEEEC-C---------CcEEEEeCCCCCceeECCC
Confidence 2 3367766542 22233444444 456666652 1 225555433 578988753
No 252
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=38.53 E-value=4.8e+02 Score=29.48 Aligned_cols=107 Identities=10% Similarity=0.086 Sum_probs=54.6
Q ss_pred CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceE-Eee-ecCCCCC--CCcccEEEEECCcEEEEEcCCCCCCCcccEEEE
Q 001901 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWH-RVV-VQGPGPG--PRYGHVMALVGQRYLMAIGGNDGKRPLADVWAL 259 (998)
Q Consensus 184 ~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~-~l~-~~g~~P~--~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~y 259 (998)
++++|+|=| +.+|+|+-.+....+- .+. .. .+|. .....+...-.++++|+|-| +..|+|
T Consensus 318 ~g~~~fFKg--------~~~W~~~~~~~~~gyP~~i~~~~-g~P~~~~~IDAA~~~~~~~k~yfFkG-------~~yw~y 381 (450)
T 1su3_A 318 RDEVRFFKG--------NKYWAVQGQNVLHGYPKDIYSSF-GFPRTVKHIDAALSEENTGKTYFFVA-------NKYWRY 381 (450)
T ss_dssp GTEEEEEET--------TEEEEEETTEECTTCSEEHHHHH-CCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEE
T ss_pred CCeEEEEeC--------CEEEEecCCcccCCCceeeehhh-cCCCCCCccceEEEEcCCCeEEEEeC-------CEEEEE
Confidence 579999977 3578887432110111 111 01 1332 12333332223458999977 579999
Q ss_pred ECCCCCceEE-----EcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCC
Q 001901 260 DTAAKPYEWR-----KLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRD 318 (998)
Q Consensus 260 D~~s~~~~W~-----~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~ 318 (998)
|..+. +-. .+... .|.....--|++..++++|+|-| +..|+|+....
T Consensus 382 d~~~~--~~~~gYPk~I~~~--fpgip~~iDAA~~~~g~~YFFkg--------~~ywr~d~~~~ 433 (450)
T 1su3_A 382 DEYKR--SMDPGYPKMIAHD--FPGIGHKVDAVFMKDGFFYFFHG--------TRQYKFDPKTK 433 (450)
T ss_dssp ETTTT--EECSSCSEEHHHH--STTSCSCCSEEEEETTEEEEEET--------TEEEEEETTTT
T ss_pred eCCCc--cccCCCCcchhhc--CCCCCCCccEEEEcCCeEEEEeC--------CEEEEEECCcc
Confidence 98754 211 11110 01111122334456899999966 34677776544
No 253
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=36.73 E-value=5.1e+02 Score=29.26 Aligned_cols=156 Identities=9% Similarity=0.001 Sum_probs=79.5
Q ss_pred EEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecC---CCCCCCcccEEEEEC-CcEEEEEcCCCCCCCcc
Q 001901 179 VATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG---PGPGPRYGHVMALVG-QRYLMAIGGNDGKRPLA 254 (998)
Q Consensus 179 sa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g---~~P~~R~~hs~~~~~-~~~Lyv~GG~~g~~~ln 254 (998)
+++.+.+.+|+|=|. -+|+++.... .+....+.. .+|.. .. ++.... ++++|+|=| +
T Consensus 267 Ai~~~~ge~y~Fkg~--------~~wr~~~~~~--~~~p~~I~~~Wp~LP~~-iD-Aa~~~~~~g~~~fFKg-------~ 327 (450)
T 1su3_A 267 AITTIRGEVMFFKDR--------FYMRTNPFYP--EVELNFISVFWPQLPNG-LE-AAYEFADRDEVRFFKG-------N 327 (450)
T ss_dssp EEEEETTEEEEEETT--------EEEECCTTSS--SCEEEEGGGTCTTSCSS-CC-EEEEEGGGTEEEEEET-------T
T ss_pred eEEecCCeEEEEeCC--------EEEEEcCCCC--cccceehhHhccCCCCC-ee-EEEEEcCCCeEEEEeC-------C
Confidence 566678899999773 3566654432 233222222 22321 22 222332 348999877 4
Q ss_pred cEEEEECCCCCceE-EEcc-cCCCCCCCccceEEEEEe-CCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCC--
Q 001901 255 DVWALDTAAKPYEW-RKLE-PEGEGPPPCMYATASARS-DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGV-- 329 (998)
Q Consensus 255 dv~~yD~~s~~~~W-~~v~-~~~~~P~~r~~~~a~~~~-~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~-- 329 (998)
.+|+|+-.+....+ ..+. ..+-+..+..-.+|.... ++++|+|-| +..|.|+.... +. .++.
T Consensus 328 ~~W~~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG--------~~yw~yd~~~~---~~--~~gYPk 394 (450)
T 1su3_A 328 KYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVA--------NKYWRYDEYKR---SM--DPGYPK 394 (450)
T ss_dssp EEEEEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEET--------TEEEEEETTTT---EE--CSSCSE
T ss_pred EEEEecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeC--------CEEEEEeCCCc---cc--cCCCCc
Confidence 67888743210001 1111 111111122334444443 689999966 35677765432 11 1111
Q ss_pred ------CCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEE
Q 001901 330 ------SPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (998)
Q Consensus 330 ------~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~ 377 (998)
+-.+..-.++...++++|.|=| +..|.||..+.+=..
T Consensus 395 ~I~~~fpgip~~iDAA~~~~g~~YFFkg-----------~~ywr~d~~~~~v~~ 437 (450)
T 1su3_A 395 MIAHDFPGIGHKVDAVFMKDGFFYFFHG-----------TRQYKFDPKTKRILT 437 (450)
T ss_dssp EHHHHSTTSCSCCSEEEEETTEEEEEET-----------TEEEEEETTTTEEEE
T ss_pred chhhcCCCCCCCccEEEEcCCeEEEEeC-----------CEEEEEECCcceEec
Confidence 1122233455567899999865 348999988876543
No 254
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=36.52 E-value=5.2e+02 Score=29.34 Aligned_cols=76 Identities=13% Similarity=0.123 Sum_probs=38.4
Q ss_pred CCcEEEEEcCCCCCCCcccEEEEECCCCCc--eEEEccc---CCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEE
Q 001901 237 GQRYLMAIGGNDGKRPLADVWALDTAAKPY--EWRKLEP---EGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAY 311 (998)
Q Consensus 237 ~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~--~W~~v~~---~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~ 311 (998)
..++||+-|..+ +.++++|+.+++. +=.++-. ........+-|+..+..++ |||.--.+..+..-..+.
T Consensus 94 ~r~~l~v~~l~s-----~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~ 167 (462)
T 2ece_A 94 ERRFLIVPGLRS-----SRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGIL 167 (462)
T ss_dssp CSCEEEEEBTTT-----CCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEE
T ss_pred cCCEEEEccCCC-----CeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEE
Confidence 344777777654 6899999987642 2222210 0000001133555555677 776332222222346677
Q ss_pred EEecCCC
Q 001901 312 GLAKHRD 318 (998)
Q Consensus 312 ~~~~~~~ 318 (998)
.+|..+.
T Consensus 168 vlD~~T~ 174 (462)
T 2ece_A 168 MLDHYSF 174 (462)
T ss_dssp EECTTTC
T ss_pred EEECCCC
Confidence 7776644
No 255
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=36.19 E-value=5.4e+02 Score=29.83 Aligned_cols=208 Identities=13% Similarity=0.081 Sum_probs=99.0
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeC--CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeec-CCCC
Q 001901 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVG--TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ-GPGP 225 (998)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~--~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~-g~~P 225 (998)
.+.++..|..+.....+... +..+.-|...... ..+|+.-. ..+.+.++|+.+.. -...... |..|
T Consensus 319 ~g~v~~vd~~~~~~~~v~~i---~~~~~~~d~~~~pdgr~~~va~~------~sn~V~ViD~~t~k--l~~~i~vgg~~P 387 (567)
T 1qks_A 319 TGKILLVDYTDLNNLKTTEI---SAERFLHDGGLDGSHRYFITAAN------ARNKLVVIDTKEGK--LVAIEDTGGQTP 387 (567)
T ss_dssp TTEEEEEETTCSSEEEEEEE---ECCSSEEEEEECTTSCEEEEEEG------GGTEEEEEETTTTE--EEEEEECSSSSB
T ss_pred CCeEEEEecCCCccceeeee---eccccccCceECCCCCEEEEEeC------CCCeEEEEECCCCc--EEEEEeccCcCC
Confidence 35677777766654444332 3456666665543 35555432 24779999999863 3322334 6667
Q ss_pred CCCcccEEEEEC-CcEEEEEcCCCCCCCcccEEEEECCCCC---ceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccC
Q 001901 226 GPRYGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAAKP---YEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRD 301 (998)
Q Consensus 226 ~~R~~hs~~~~~-~~~Lyv~GG~~g~~~lndv~~yD~~s~~---~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~ 301 (998)
.+..+... ... .+.+|+.+-.. -+.+.++|..+.. ..|+.+....... .........-.+..+|+---.+
T Consensus 388 hpg~g~~~-~~p~~g~v~~t~~~g----~~~Vsvid~~~~~~~~~~~kvv~~i~~~g-~g~~~i~~~p~~~~l~v~~~~~ 461 (567)
T 1qks_A 388 HPGRGANF-VHPTFGPVWATSHMG----DDSVALIGTDPEGHPDNAWKILDSFPALG-GGSLFIKTHPNSQYLYVDATLN 461 (567)
T ss_dssp CCTTCEEE-EETTTEEEEEEEBSS----SSEEEEEECCTTTCTTTBTSEEEEEECSC-SCCCCEECCTTCSEEEEECTTC
T ss_pred CCccceee-ECCCCCcEEEeCCCC----CCeEEEecCCCCCCccccCEEEEEEecCC-CCCEEEEeCCCCCeEEEecCCC
Confidence 66433332 333 24677654221 1468888887631 1365554322211 0101111111234677743111
Q ss_pred CCCCCcccEEEEecCCC------CeEEEEECC---CCC-CCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEEC
Q 001901 302 ASSVPLASAYGLAKHRD------GRWEWAIAP---GVS-PSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDT 370 (998)
Q Consensus 302 ~~~~~~~dv~~~~~~~~------~~W~w~~~~---g~~-P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~ 370 (998)
.+....+.+..|+..+. ..+....+. +.. +..|..|-...- +..+|+.-+ ++. ...+.|.+||.
T Consensus 462 ~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~-~~~----~~~~~i~v~D~ 536 (567)
T 1qks_A 462 PEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVW-NGK----DQESALVVVDD 536 (567)
T ss_dssp SSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEE-CCT----TSCCEEEEEET
T ss_pred CCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEee-cCC----CCCCcEEEEEC
Confidence 11001235555654422 122322211 111 123444433222 457887622 111 12577999999
Q ss_pred CCCeEEEc
Q 001901 371 AAGVWCDT 378 (998)
Q Consensus 371 ~t~~W~~v 378 (998)
+|.+=...
T Consensus 537 ~t~~~~~~ 544 (567)
T 1qks_A 537 KTLELKHV 544 (567)
T ss_dssp TTTEEEEE
T ss_pred CCceEEEE
Confidence 99875543
No 256
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=35.64 E-value=3.6e+02 Score=27.15 Aligned_cols=166 Identities=7% Similarity=0.059 Sum_probs=78.3
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
..+++||.....-..+... ....-+++++. ++.+||.... ...+++||.... ....+...+.. .
T Consensus 100 ~~i~~~d~~g~~~~~~~~~----~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~g~--~~~~~~~~~~~---~ 164 (286)
T 1q7f_A 100 HQIQIYNQYGQFVRKFGAT----ILQHPRGVTVDNKGRIIVVECK------VMRVIIFDQNGN--VLHKFGCSKHL---E 164 (286)
T ss_dssp CEEEEECTTSCEEEEECTT----TCSCEEEEEECTTSCEEEEETT------TTEEEEECTTSC--EEEEEECTTTC---S
T ss_pred CEEEEECCCCcEEEEecCc----cCCCceEEEEeCCCCEEEEECC------CCEEEEEcCCCC--EEEEeCCCCcc---C
Confidence 4677888554443334221 11122344443 3478877542 246899997653 12222211111 1
Q ss_pred cccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEE-EeCCEEEEEeccCCCCCCc
Q 001901 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASA-RSDGLLLLCGGRDASSVPL 307 (998)
Q Consensus 229 ~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~-~~~~~lyvfGG~~~~~~~~ 307 (998)
.-.++++-.++.+|+.... -+.+.+||+... ....+...+.. ..-.+++ -.++.+|+....++
T Consensus 165 ~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~g~--~~~~~~~~g~~----~~p~~i~~d~~G~l~v~~~~~~----- 228 (286)
T 1q7f_A 165 FPNGVVVNDKQEIFISDNR-----AHCVKVFNYEGQ--YLRQIGGEGIT----NYPIGVGINSNGEILIADNHNN----- 228 (286)
T ss_dssp SEEEEEECSSSEEEEEEGG-----GTEEEEEETTCC--EEEEESCTTTS----CSEEEEEECTTCCEEEEECSSS-----
T ss_pred CcEEEEECCCCCEEEEECC-----CCEEEEEcCCCC--EEEEEccCCcc----CCCcEEEECCCCCEEEEeCCCC-----
Confidence 2234444445578886542 247899998655 33344322110 1112222 34678888764321
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEc
Q 001901 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSG 350 (998)
Q Consensus 308 ~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~G 350 (998)
..+..|+......+.+.... +. ...+++++. ++++||..
T Consensus 229 ~~i~~~~~~g~~~~~~~~~~---~~-~~~~~i~~~~~g~l~vs~ 268 (286)
T 1q7f_A 229 FNLTIFTQDGQLISALESKV---KH-AQCFDVALMDDGSVVLAS 268 (286)
T ss_dssp CEEEEECTTSCEEEEEEESS---CC-SCEEEEEEETTTEEEEEE
T ss_pred EEEEEECCCCCEEEEEcccC---CC-CcceeEEECCCCcEEEEC
Confidence 14666664322122222211 11 112334443 67888873
No 257
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=35.37 E-value=4.8e+02 Score=28.53 Aligned_cols=160 Identities=9% Similarity=0.019 Sum_probs=81.3
Q ss_pred eEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeec-CCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccE
Q 001901 178 HVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ-GPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADV 256 (998)
Q Consensus 178 hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~-g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv 256 (998)
-+++.+.+++|+|=|. -+|+++.......-..+... ..+|. ....+.....++++|+|-| +.+
T Consensus 184 DAv~~~~g~~~fFkg~--------~~Wr~~~~~~~~~p~~I~~~wpgLP~-~iDAa~~~~~~g~~~fFkg-------~~y 247 (365)
T 3ba0_A 184 DAVTTVGNKIFFFKDR--------FFWLKVSERPKTSVNLISSLWPTLPS-GIEAAYEIEARNQVFLFKD-------DKY 247 (365)
T ss_dssp SCEEEETTEEEEEETT--------EEEECCSSCCCCCEEEHHHHCSSCCS-SCCEEEEEGGGTEEEEEET-------TEE
T ss_pred eeEEEcCCeEEEEeCC--------EEEEEcCCCccCCccchhhhccCCCC-CccEEEEecCCCEEEEEeC-------CEE
Confidence 3455678899998663 46666544321110111100 02342 2332222222448999977 467
Q ss_pred EEEECCCCCceE-EEcccCCCCCCCccceEEEEEe-CCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCC-----
Q 001901 257 WALDTAAKPYEW-RKLEPEGEGPPPCMYATASARS-DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGV----- 329 (998)
Q Consensus 257 ~~yD~~s~~~~W-~~v~~~~~~P~~r~~~~a~~~~-~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~----- 329 (998)
|+|+.......+ ..+...+-+..+..-.+|.... ++++|+|-| +..|.|+.... .. .++.
T Consensus 248 Wr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG--------~~yw~yd~~~~---~v--~~gyPk~I~ 314 (365)
T 3ba0_A 248 WLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVD--------NQYWRYDERRQ---MM--DPGYPKLIT 314 (365)
T ss_dssp EECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEET--------TEEEEEETTTT---EE--CSSCCCCHH
T ss_pred EEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEEC--------CEEEEEeCCcc---ee--cCCCCcchh
Confidence 888654321122 2333322211122344444443 589999966 35677776543 11 1111
Q ss_pred ---CCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCeEEE
Q 001901 330 ---SPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (998)
Q Consensus 330 ---~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~ 377 (998)
+..+..-.++... ++++|.|=| +..|.||..+.+-..
T Consensus 315 ~~f~g~p~~iDaA~~~~~g~~YfFkg-----------~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 315 KNFQGIGPKIDAVFYSKNKYYYFFQG-----------SNQFEYDFLLQRITK 355 (365)
T ss_dssp HHSTTCCSSCSEEEEETTTEEEEEET-----------TEEEEEETTTTEEEE
T ss_pred hcCCCCCCccceeeEecCCcEEEEeC-----------CEEEEEECCccEEec
Confidence 1122233445555 789999855 348999998887654
No 258
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=34.63 E-value=1.9e+02 Score=29.32 Aligned_cols=52 Identities=23% Similarity=0.254 Sum_probs=28.1
Q ss_pred EEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCC
Q 001901 240 YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (998)
Q Consensus 240 ~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~ 302 (998)
.+++.|+.++ .+..||+.+. .-........ ......+...++.+++.|+.++
T Consensus 30 ~~l~s~~~dg-----~v~vw~~~~~--~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~dg 81 (313)
T 3odt_A 30 SKVASVSRDG-----TVRLWSKDDQ--WLGTVVYTGQ----GFLNSVCYDSEKELLLFGGKDT 81 (313)
T ss_dssp TEEEEEETTS-----EEEEEEESSS--EEEEEEEECS----SCEEEEEEETTTTEEEEEETTS
T ss_pred CEEEEEEcCC-----cEEEEECCCC--EEEEEeecCC----ccEEEEEECCCCCEEEEecCCC
Confidence 4677777654 5778888766 3332221111 1222333445677777777654
No 259
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=33.27 E-value=3.9e+02 Score=26.90 Aligned_cols=159 Identities=9% Similarity=0.060 Sum_probs=79.6
Q ss_pred ceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecC---CCCCCCcccEEEEECCcEEEEEcCCCCCCCc
Q 001901 177 AHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG---PGPGPRYGHVMALVGQRYLMAIGGNDGKRPL 253 (998)
Q Consensus 177 ~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g---~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~l 253 (998)
.-|++.+.+++|+|=|. .+|+++..... ......+.. .+|. ....+.....++++|+|=|
T Consensus 33 ~DAi~~~~g~~~fFkg~--------~~Wr~~~~~~~-~~~P~~I~~~wp~lp~-~IDAA~~~~~~~k~yfFkG------- 95 (218)
T 1gen_A 33 FDGIAQIRGEIFFFKDR--------FIWRTVTPRDK-PMGPLLVATFWPELPE-KIDAVYEAPQEEKAVFFAG------- 95 (218)
T ss_dssp CSEEEEETTEEEEEETT--------EEEEESSTTSC-CEEEEEGGGTCTTSCS-CCSEEEEETTTTEEEEEET-------
T ss_pred EeEEEeCCCcEEEEECC--------EEEEEeCCCCc-cCCCEEHHHhcCCCCC-CccEEEEECCCCEEEEEeC-------
Confidence 34566678899999773 46776654321 111111111 2332 2333322223458999977
Q ss_pred ccEEEEECCCCCceE-EEcccCCCCCCCccceEEEEE-eCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEEC-----
Q 001901 254 ADVWALDTAAKPYEW-RKLEPEGEGPPPCMYATASAR-SDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIA----- 326 (998)
Q Consensus 254 ndv~~yD~~s~~~~W-~~v~~~~~~P~~r~~~~a~~~-~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~----- 326 (998)
+..|+||-.+....+ ..+...+.+.......+|... .++++|+|-| +..|+|+.... +....
T Consensus 96 ~~yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG--------~~ywr~d~~~~---~v~~gyPr~i 164 (218)
T 1gen_A 96 NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG--------DKFWRYNEVKK---KMDPGFPKLI 164 (218)
T ss_dssp TEEEEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET--------TEEEEEETTTT---EECSSCCEEH
T ss_pred CEEEEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC--------CEEEEEECccc---cccCCCCcch
Confidence 578999853210000 122222222222233444443 5789999976 35677776543 11100
Q ss_pred C-CCCCCCcceeEEEEEC--CEEEEEcccCCCCCccccCCeEEEEECCCCe
Q 001901 327 P-GVSPSPRYQHAAVFVN--ARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (998)
Q Consensus 327 ~-g~~P~pR~~hsav~~~--~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~ 374 (998)
. .-+..+..-.++.... +++|.|=| +..|.||..+..
T Consensus 165 ~~~w~g~p~~idaAf~~~~~g~~YfFkg-----------~~y~~~~~~~~~ 204 (218)
T 1gen_A 165 ADAWNAIPDNLDAVVDLQGGGHSYFFKG-----------AYYLKLENQSLK 204 (218)
T ss_dssp HHHSSSCCSSCSEEEECTTTCEEEEEET-----------TEEEEEETTEEE
T ss_pred hhccCCCCCCCCEEEEEcCCCcEEEEEC-----------CEEEEEECCcee
Confidence 0 0011223334555554 79999855 347888876654
No 260
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=33.09 E-value=4.6e+02 Score=27.62 Aligned_cols=146 Identities=12% Similarity=0.036 Sum_probs=72.7
Q ss_pred EEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCC-CCCcccEEEEEC-CcEEEEEcCCCCCCCcccEEEEECCC
Q 001901 186 MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP-GPRYGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAA 263 (998)
Q Consensus 186 ~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P-~~R~~hs~~~~~-~~~Lyv~GG~~g~~~lndv~~yD~~s 263 (998)
.+++.|+. ...+.+||+.+.. ..... ... ....-.+++... ++.+++.|+.++ .+..||+.+
T Consensus 87 ~~l~s~~~------dg~i~iwd~~~~~--~~~~~---~~~~h~~~v~~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~ 150 (383)
T 3ei3_B 87 TTVAVGSK------GGDIILWDYDVQN--KTSFI---QGMGPGDAITGMKFNQFNTNQLFVSSIRG-----ATTLRDFSG 150 (383)
T ss_dssp TEEEEEEB------TSCEEEEETTSTT--CEEEE---CCCSTTCBEEEEEEETTEEEEEEEEETTT-----EEEEEETTS
T ss_pred CEEEEEcC------CCeEEEEeCCCcc--cceee---ecCCcCCceeEEEeCCCCCCEEEEEeCCC-----EEEEEECCC
Confidence 56666664 2468999998753 43332 111 111222333334 346777777654 578889887
Q ss_pred CCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-
Q 001901 264 KPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV- 342 (998)
Q Consensus 264 ~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~- 342 (998)
. ....+...... .......+...++.+++.|+.++ .+..++.... . .....+. ...-.++++.
T Consensus 151 ~--~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~------~i~i~d~~~~-~--~~~~~~h---~~~v~~~~~~~ 214 (383)
T 3ei3_B 151 S--VIQVFAKTDSW--DYWYCCVDVSVSRQMLATGDSTG------RLLLLGLDGH-E--IFKEKLH---KAKVTHAEFNP 214 (383)
T ss_dssp C--EEEEEECCCCS--SCCEEEEEEETTTTEEEEEETTS------EEEEEETTSC-E--EEEEECS---SSCEEEEEECS
T ss_pred C--ceEEEeccCCC--CCCeEEEEECCCCCEEEEECCCC------CEEEEECCCC-E--EEEeccC---CCcEEEEEECC
Confidence 6 55555332210 01122333345667777777543 3444444222 1 1111111 1112223333
Q ss_pred CCE-EEEEcccCCCCCccccCCeEEEEECCC
Q 001901 343 NAR-LHVSGGALGGGRMVEDSSSVAVLDTAA 372 (998)
Q Consensus 343 ~~~-L~V~GG~~~~~~~~~~~~dv~vyD~~t 372 (998)
++. +++.|+.+ ..+.+||+.+
T Consensus 215 ~~~~~l~s~~~d---------~~i~iwd~~~ 236 (383)
T 3ei3_B 215 RCDWLMATSSVD---------ATVKLWDLRN 236 (383)
T ss_dssp SCTTEEEEEETT---------SEEEEEEGGG
T ss_pred CCCCEEEEEeCC---------CEEEEEeCCC
Confidence 344 77777653 3488899876
No 261
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=32.72 E-value=2.2e+02 Score=32.27 Aligned_cols=64 Identities=20% Similarity=0.182 Sum_probs=36.3
Q ss_pred CcccEEEEECCcEEEEEcCCCC----CCC-ccc-EEEEEC------CCCCceEEEcccCCCCCCCccceEEEEEeCCEEE
Q 001901 228 RYGHVMALVGQRYLMAIGGNDG----KRP-LAD-VWALDT------AAKPYEWRKLEPEGEGPPPCMYATASARSDGLLL 295 (998)
Q Consensus 228 R~~hs~~~~~~~~Lyv~GG~~g----~~~-lnd-v~~yD~------~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~ly 295 (998)
-..|++++..++.+|.+|-... ... ..+ -....+ ... .+..+.. ...|++++..++.+|
T Consensus 265 G~~hs~alt~~G~v~~wG~n~~GqlG~~~~~~~~~~~~~P~~v~~~~~~--~i~~ia~-------G~~hs~~lt~~G~v~ 335 (473)
T 3of7_A 265 GENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNV--VIRSIAA-------GEHHSLILSQDGDLY 335 (473)
T ss_dssp CSSEEEEEETTSCEEEEEECTTSTTCCCSCCCTTCEEEEEEECCCCTTC--CEEEEEE-------CSSEEEEEETTSCEE
T ss_pred CCCeEEEEecCCCEEEeCCCCCCCcCCCCcccCCceeeccccccccCCc--cEEEEEe-------CCCeEEEEeCCCeEE
Confidence 3578888888889999995421 111 000 011111 111 3444433 246777777889999
Q ss_pred EEecc
Q 001901 296 LCGGR 300 (998)
Q Consensus 296 vfGG~ 300 (998)
.+|-.
T Consensus 336 ~wG~n 340 (473)
T 3of7_A 336 SCGRL 340 (473)
T ss_dssp EEEEC
T ss_pred EEECC
Confidence 99954
No 262
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=32.47 E-value=6.8e+02 Score=29.47 Aligned_cols=152 Identities=16% Similarity=0.113 Sum_probs=78.0
Q ss_pred ccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCC-ceEEEcccCCCCCC
Q 001901 201 EDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKP-YEWRKLEPEGEGPP 279 (998)
Q Consensus 201 ~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~-~~W~~v~~~~~~P~ 279 (998)
+++|++|+.+...+|..+.. .. ......+...++.||+....++ ....++.+|+.+.. -.|+.+.+....
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~---~~--~~~~~~~~~~g~~l~~~t~~~~--~~~~l~~~d~~~~~~~~~~~l~~~~~~-- 329 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQG---DL--DADVSLVDNKGSTLYLLTNRDA--PNRRLVTVDAANPGPAHWRDLIPERQQ-- 329 (693)
T ss_dssp CEEEEEETTSTTCCCEEEEC---SS--SSCEEEEEEETTEEEEEECTTC--TTCEEEEEETTSCCGGGCEEEECCCSS--
T ss_pred cEEEEEECCCCCCceEEEeC---CC--CceEEEEeccCCEEEEEECCCC--CCCEEEEEeCCCCCccccEEEecCCCC--
Confidence 68999999775335877751 11 1111222233347888876543 23579999997642 258877554331
Q ss_pred CccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEE-EC-CEEEEE-cccCCCC
Q 001901 280 PCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVF-VN-ARLHVS-GGALGGG 356 (998)
Q Consensus 280 ~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~-~~-~~L~V~-GG~~~~~ 356 (998)
.. .....+++|++..-.++ ...++.++.. . .+. ..+. . |.......... .+ +.+++. .+..
T Consensus 330 --~~--~~s~~g~~lv~~~~~~g----~~~l~~~d~~-g-~~~-~~l~-~-p~~~~~~~~~~~~d~~~l~~~~ss~~--- 393 (693)
T 3iuj_A 330 --VL--TVHSGSGYLFAEYMVDA----TARVEQFDYE-G-KRV-REVA-L-PGLGSVSGFNGKHDDPALYFGFENYA--- 393 (693)
T ss_dssp --CE--EEEEETTEEEEEEEETT----EEEEEEECTT-S-CEE-EEEC-C-SSSSEEEECCCCTTCSCEEEEEECSS---
T ss_pred --EE--EEEEECCEEEEEEEECC----eeEEEEEECC-C-Cee-EEee-c-CCCceEEeeecCCCCCEEEEEecCCC---
Confidence 11 44455666666543322 2355666544 2 222 1221 1 11111111111 12 334433 2221
Q ss_pred CccccCCeEEEEECCCCeEEEcccC
Q 001901 357 RMVEDSSSVAVLDTAAGVWCDTKSV 381 (998)
Q Consensus 357 ~~~~~~~dv~vyD~~t~~W~~v~~~ 381 (998)
....++.||+.+.+++.+...
T Consensus 394 ----tP~~l~~~d~~~g~~~~l~~~ 414 (693)
T 3iuj_A 394 ----QPPTLYRFEPKSGAISLYRAS 414 (693)
T ss_dssp ----SCCEEEEECTTTCCEEEEECC
T ss_pred ----CCCEEEEEECCCCeEEEEEeC
Confidence 145799999999988877654
No 263
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=32.31 E-value=5.3e+02 Score=30.08 Aligned_cols=109 Identities=6% Similarity=-0.100 Sum_probs=49.6
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCC---CCCcccEEEEEcCCCCCceEEeeecCCCCC
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPA---GLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~---~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~ 226 (998)
.++++|+.+.+-..+........-+ -.+.+.- +++.++++..... .....+++++|+.+.. -..+.... ...
T Consensus 38 ~i~~~d~~~g~~~~~~~~~~~~~~~-v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~--~~~l~~~~-~~~ 113 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGKKIESLR-AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGD--PQSLDPPE-VSN 113 (723)
T ss_dssp CEEEBCGGGCCCEEEECTTTTTTTT-CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCC--CEECCCTT-CCS
T ss_pred CEEEEECCCCcEEEEeccccccccc-cceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCc--eEeccCCc-ccc
Confidence 6778888777655443321100001 1222222 3444444432211 1234789999998863 33443111 001
Q ss_pred CCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcc
Q 001901 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (998)
Q Consensus 227 ~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~ 272 (998)
.+.. ..+.-.+++.++++.. .+++.+|+.+. +..++.
T Consensus 114 ~~~~-~~~~SPdG~~la~~~~------~~i~~~~~~~g--~~~~~~ 150 (723)
T 1xfd_A 114 AKLQ-YAGWGPKGQQLIFIFE------NNIYYCAHVGK--QAIRVV 150 (723)
T ss_dssp CCCS-BCCBCSSTTCEEEEET------TEEEEESSSSS--CCEEEE
T ss_pred cccc-ccEECCCCCEEEEEEC------CeEEEEECCCC--ceEEEe
Confidence 1111 1112223334444432 37899998876 444443
No 264
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=32.13 E-value=4e+02 Score=26.64 Aligned_cols=180 Identities=7% Similarity=-0.030 Sum_probs=90.6
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
+.+++||+. .++....... ....-++++.. ++.+|+.... ...+++||.. . +........ ...
T Consensus 83 ~~v~~~d~~-g~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~-g--~~~~~~~~~---~~~ 146 (300)
T 2qc5_A 83 NKIGKLSKK-GGFTEYPLPQ---PDSGPYGITEGLNGDIWFTQLN------GDRIGKLTAD-G--TIYEYDLPN---KGS 146 (300)
T ss_dssp TEEEEECTT-SCEEEEECSS---TTCCEEEEEECSTTCEEEEETT------TTEEEEECTT-S--CEEEEECSS---TTC
T ss_pred CeEEEECCC-CCeEEecCCC---CCCCCccceECCCCCEEEEccC------CCeEEEECCC-C--CEEEccCCC---CCC
Confidence 358888888 6666554221 11223444444 4578876532 2468899887 3 244332111 122
Q ss_pred cccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEE-eCCEEEEEeccCCCCCCc
Q 001901 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASAR-SDGLLLLCGGRDASSVPL 307 (998)
Q Consensus 229 ~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~-~~~~lyvfGG~~~~~~~~ 307 (998)
.-+.++.-.++.||+.... ...+++||+ +. ++..+..... ...-.+..+ .++.||+.... .
T Consensus 147 ~~~~i~~d~~g~l~v~~~~-----~~~i~~~~~-~g--~~~~~~~~~~----~~~~~~i~~d~~g~l~v~~~~------~ 208 (300)
T 2qc5_A 147 YPAFITLGSDNALWFTENQ-----NNSIGRITN-TG--KLEEYPLPTN----AAAPVGITSGNDGALWFVEIM------G 208 (300)
T ss_dssp CEEEEEECTTSSEEEEETT-----TTEEEEECT-TC--CEEEEECSST----TCCEEEEEECTTSSEEEEETT------T
T ss_pred CceeEEECCCCCEEEEecC-----CCeEEEECC-CC--cEEEeeCCCC----CCCcceEEECCCCCEEEEccC------C
Confidence 2344444444568875432 246899998 55 4444322111 111222333 36788886421 2
Q ss_pred ccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEc
Q 001901 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (998)
Q Consensus 308 ~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v 378 (998)
..++.|+. ++.+.....+.. ...-.++++. +++|||.... .+.+.+||+ +.+...+
T Consensus 209 ~~i~~~~~--~g~~~~~~~~~~---~~~~~~i~~d~~g~l~v~~~~---------~~~i~~~~~-~g~~~~~ 265 (300)
T 2qc5_A 209 NKIGRITT--TGEISEYDIPTP---NARPHAITAGKNSEIWFTEWG---------ANQIGRITN-DNTIQEY 265 (300)
T ss_dssp TEEEEECT--TCCEEEEECSST---TCCEEEEEECSTTCEEEEETT---------TTEEEEECT-TSCEEEE
T ss_pred CEEEEEcC--CCcEEEEECCCC---CCCceEEEECCCCCEEEeccC---------CCeEEEECC-CCcEEEE
Confidence 34677766 345554433211 1112233333 4678886421 345889998 4555543
No 265
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=32.01 E-value=4.3e+02 Score=27.01 Aligned_cols=190 Identities=11% Similarity=0.150 Sum_probs=89.6
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEeCC--EEEEEeCCCCCCCCccc-EEEEEcCCCCCceEEeeecCCCCCC
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGT--MVVIQGGIGPAGLSAED-LHVLDLTQQRPRWHRVVVQGPGPGP 227 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~--~lyVfGG~~~~~~~~~d-v~~~Dl~t~t~~W~~l~~~g~~P~~ 227 (998)
.+++||+.+.+.......+ ...+.++...+ .+|+.+.. .+. +++|++.... ....... ...+..
T Consensus 109 ~i~v~d~~~~~~~~~~~~~-----~~~~~~~~spdg~~l~~~~~~------~~~~i~~~~~~~~g-~~~~~~~-~~~~~~ 175 (331)
T 3u4y_A 109 NMQSYSFLKNKFISTIPIP-----YDAVGIAISPNGNGLILIDRS------SANTVRRFKIDADG-VLFDTGQ-EFISGG 175 (331)
T ss_dssp EEEEEETTTTEEEEEEECC-----TTEEEEEECTTSSCEEEEEET------TTTEEEEEEECTTC-CEEEEEE-EEECSS
T ss_pred cEEEEECCCCCeEEEEECC-----CCccceEECCCCCEEEEEecC------CCceEEEEEECCCC-cEeecCC-ccccCC
Confidence 7999999988766543332 11244554432 57776543 135 7788876532 2211100 011222
Q ss_pred CcccEEEEECCc-EEEEEcCCCCCCCcccEEEEECCCCCc-e-EEEcccCCCCCCCccceEEEEEeCCE-EEEEeccCCC
Q 001901 228 RYGHVMALVGQR-YLMAIGGNDGKRPLADVWALDTAAKPY-E-WRKLEPEGEGPPPCMYATASARSDGL-LLLCGGRDAS 303 (998)
Q Consensus 228 R~~hs~~~~~~~-~Lyv~GG~~g~~~lndv~~yD~~s~~~-~-W~~v~~~~~~P~~r~~~~a~~~~~~~-lyvfGG~~~~ 303 (998)
..-+.++.-.++ ++|+.+..+ +.+.+||+.+... + -..+.. +. .....+...+++ +|+....
T Consensus 176 ~~~~~~~~spdg~~l~v~~~~~-----~~v~v~d~~~~~~~~~~~~~~~-~~-----~~~~~~~spdg~~l~v~~~~--- 241 (331)
T 3u4y_A 176 TRPFNITFTPDGNFAFVANLIG-----NSIGILETQNPENITLLNAVGT-NN-----LPGTIVVSRDGSTVYVLTES--- 241 (331)
T ss_dssp SSEEEEEECTTSSEEEEEETTT-----TEEEEEECSSTTSCEEEEEEEC-SS-----CCCCEEECTTSSEEEEECSS---
T ss_pred CCccceEECCCCCEEEEEeCCC-----CeEEEEECCCCcccceeeeccC-CC-----CCceEEECCCCCEEEEEEcC---
Confidence 222344444443 577765432 4689999987732 0 222221 11 111223333454 6665431
Q ss_pred CCCcccEEEEecCCCCeEEEEEC--CC--CCCCCcce-eEEEEE-C-CEEEEEcccCCCCCccccCCeEEEEECCCCeEE
Q 001901 304 SVPLASAYGLAKHRDGRWEWAIA--PG--VSPSPRYQ-HAAVFV-N-ARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (998)
Q Consensus 304 ~~~~~dv~~~~~~~~~~W~w~~~--~g--~~P~pR~~-hsav~~-~-~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~ 376 (998)
.+.++.++..+. +.+.... .. ..+.+... ...++. + ..||+.++. .+.+.+||+.+..=.
T Consensus 242 ---~~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~---------~~~v~v~d~~~~~~~ 308 (331)
T 3u4y_A 242 ---TVDVFNFNQLSG-TLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANI---------SRELKVFTISGKVVG 308 (331)
T ss_dssp ---EEEEEEEETTTT-EEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETT---------TTEEEEEETTSCEEE
T ss_pred ---CCEEEEEECCCC-ceeeecccccccccCCCCcccccceEECCCCCEEEEecCC---------CCcEEEEEecCCccc
Confidence 234666665543 3322221 11 11222221 122333 3 356666542 346899999877654
Q ss_pred Eccc
Q 001901 377 DTKS 380 (998)
Q Consensus 377 ~v~~ 380 (998)
.+..
T Consensus 309 ~~~~ 312 (331)
T 3u4y_A 309 YVAG 312 (331)
T ss_dssp ECTT
T ss_pred ceec
Confidence 4443
No 266
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=31.84 E-value=4.1e+02 Score=26.73 Aligned_cols=65 Identities=9% Similarity=0.126 Sum_probs=36.6
Q ss_pred CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceE-EeeecCCCCCC-CcccEEEEE-CCcEEEEEcCCCCCCCcccEEEEE
Q 001901 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWH-RVVVQGPGPGP-RYGHVMALV-GQRYLMAIGGNDGKRPLADVWALD 260 (998)
Q Consensus 184 ~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~-~l~~~g~~P~~-R~~hs~~~~-~~~~Lyv~GG~~g~~~lndv~~yD 260 (998)
++++|+|=| +.+|+|+-.+....+- .+... .+|.. ..-.++... .++++|+|-| +..|+||
T Consensus 87 ~~k~yfFkG--------~~yW~y~~~~~~~gyPk~I~~~-g~p~~~~~IDAAf~~~~~g~~YfFkG-------~~ywr~d 150 (218)
T 1gen_A 87 EEKAVFFAG--------NEYWIYSASTLERGYPKPLTSL-GLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYN 150 (218)
T ss_dssp TTEEEEEET--------TEEEEEETTEECTTCSEEGGGG-TCCTTCCCCSEEEEETTTTEEEEEET-------TEEEEEE
T ss_pred CCEEEEEeC--------CEEEEEcCccccCCCCccHhhc-CCCCCcCCccEEEEEcCCCeEEEEEC-------CEEEEEE
Confidence 469999977 4689998532111111 11111 22322 122333333 4558999977 5789999
Q ss_pred CCCC
Q 001901 261 TAAK 264 (998)
Q Consensus 261 ~~s~ 264 (998)
..+.
T Consensus 151 ~~~~ 154 (218)
T 1gen_A 151 EVKK 154 (218)
T ss_dssp TTTT
T ss_pred Cccc
Confidence 9776
No 267
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=31.64 E-value=6.7e+02 Score=29.16 Aligned_cols=62 Identities=10% Similarity=-0.099 Sum_probs=33.2
Q ss_pred cCCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEee
Q 001901 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVV 219 (998)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~ 219 (998)
...+++++|+.+.+-..+..... ...+..+.+..-+++.++|+.. .+++++|+.+.. ...+.
T Consensus 89 ~~~~i~~~d~~~~~~~~l~~~~~-~~~~~~~~~~SPdG~~la~~~~-------~~i~~~~~~~g~--~~~~~ 150 (723)
T 1xfd_A 89 YTGYYVLSKIPHGDPQSLDPPEV-SNAKLQYAGWGPKGQQLIFIFE-------NNIYYCAHVGKQ--AIRVV 150 (723)
T ss_dssp CCSEEEEEESSSCCCEECCCTTC-CSCCCSBCCBCSSTTCEEEEET-------TEEEEESSSSSC--CEEEE
T ss_pred ceeeEEEEECCCCceEeccCCcc-ccccccccEECCCCCEEEEEEC-------CeEEEEECCCCc--eEEEe
Confidence 45789999999887666654311 1111111112223444444432 379999988753 44443
No 268
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=31.52 E-value=4.9e+02 Score=27.47 Aligned_cols=104 Identities=20% Similarity=0.143 Sum_probs=50.8
Q ss_pred EEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEE-EeCCEEEEEeccCCCCCCcccEEEEecCCC
Q 001901 240 YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASA-RSDGLLLLCGGRDASSVPLASAYGLAKHRD 318 (998)
Q Consensus 240 ~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~-~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~ 318 (998)
.+++.|+.++ .+..||+.+. +....-.... ....++. ..++.+++.|+.++. +..++....
T Consensus 211 ~~l~sgs~Dg-----~v~~wd~~~~--~~~~~~~~h~-----~~v~~v~~~p~~~~l~s~s~D~~------v~lwd~~~~ 272 (354)
T 2pbi_B 211 NTFVSGGCDK-----KAMVWDMRSG--QCVQAFETHE-----SDVNSVRYYPSGDAFASGSDDAT------CRLYDLRAD 272 (354)
T ss_dssp CEEEEEETTS-----CEEEEETTTC--CEEEEECCCS-----SCEEEEEECTTSSEEEEEETTSC------EEEEETTTT
T ss_pred CEEEEEeCCC-----eEEEEECCCC--cEEEEecCCC-----CCeEEEEEeCCCCEEEEEeCCCe------EEEEECCCC
Confidence 5777887765 5788898877 4333211111 1112222 236677777776532 233333322
Q ss_pred CeEEEEECCCCCCCCcceeEEEEE--CCEEEEEcccCCCCCccccCCeEEEEECCCCe
Q 001901 319 GRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (998)
Q Consensus 319 ~~W~w~~~~g~~P~pR~~hsav~~--~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~ 374 (998)
.-. ...... .......++.+ ++.+++.|+.+ ..+.+||..+.+
T Consensus 273 -~~~-~~~~~~--~~~~~~~~~~~s~~g~~l~~g~~d---------~~i~vwd~~~~~ 317 (354)
T 2pbi_B 273 -REV-AIYSKE--SIIFGASSVDFSLSGRLLFAGYND---------YTINVWDVLKGS 317 (354)
T ss_dssp -EEE-EEECCT--TCCSCEEEEEECTTSSEEEEEETT---------SCEEEEETTTCS
T ss_pred -cEE-EEEcCC--CcccceeEEEEeCCCCEEEEEECC---------CcEEEEECCCCc
Confidence 111 111111 11122222222 56777777643 348889987664
No 269
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=30.59 E-value=1.6e+02 Score=34.51 Aligned_cols=81 Identities=20% Similarity=0.291 Sum_probs=51.4
Q ss_pred cccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCC
Q 001901 200 AEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPP 279 (998)
Q Consensus 200 ~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~ 279 (998)
...++.+|+.+....|+... +.+..+..++..++ .+|+ |..+ ..++.||..+....|+.-.+.+.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~-----~~~~~~g~~~tagg-lvf~-g~~d-----g~l~A~D~~tG~~lW~~~~~~g~--- 529 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKE-----HLPLWAGVLATAGN-LVFT-GTGD-----GYFKAFDAKSGKELWKFQTGSGI--- 529 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEE-----SSCCCSCCEEETTT-EEEE-ECTT-----SEEEEEETTTCCEEEEEECSSCC---
T ss_pred cceEEEEECCCCCEEEEecC-----CCCCcccceEeCCC-EEEE-ECCC-----CcEEEEECCCCCEEEEecCCCCc---
Confidence 35689999998877798765 22344444444444 5555 5443 36899999998888987654332
Q ss_pred CccceEEEEEeCCEEEEE
Q 001901 280 PCMYATASARSDGLLLLC 297 (998)
Q Consensus 280 ~r~~~~a~~~~~~~lyvf 297 (998)
....++...+++.||.
T Consensus 530 --~a~P~~y~~~G~qYv~ 545 (582)
T 1flg_A 530 --VSPPITWEQDGEQYLG 545 (582)
T ss_dssp --CSCCEEEEETTEEEEE
T ss_pred --ccCceEEEECCEEEEE
Confidence 1222333468988876
No 270
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=30.55 E-value=4.6e+02 Score=26.91 Aligned_cols=143 Identities=13% Similarity=0.007 Sum_probs=65.6
Q ss_pred cEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECC----cEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCC
Q 001901 202 DLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQ----RYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEG 277 (998)
Q Consensus 202 dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~----~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~ 277 (998)
.+.+||+.+.. ....+...........-.+++...+ +.+++.|+.++ .+..||+.+....... ....
T Consensus 45 ~v~vw~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg-----~i~v~d~~~~~~~~~~-~~~~-- 115 (366)
T 3k26_A 45 RVTLYECHSQG-EIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRG-----IIRIINPITMQCIKHY-VGHG-- 115 (366)
T ss_dssp EEEEEEECGGG-CEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTC-----EEEEECTTTCCEEEEE-ESCC--
T ss_pred EEEEEEcCCCc-EEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCC-----EEEEEEchhceEeeee-cCCC--
Confidence 58888887542 2233321111111122222223222 35777787664 6888898776322221 1111
Q ss_pred CCCccceEEEEE-e-CCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCC
Q 001901 278 PPPCMYATASAR-S-DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALG 354 (998)
Q Consensus 278 P~~r~~~~a~~~-~-~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~ 354 (998)
..-.++.. . ++.+++.|+.++ .+..++.... ...... .........-.++++. ++..++.|+.+
T Consensus 116 ----~~i~~~~~~~~~~~~l~s~~~dg------~i~iwd~~~~-~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d- 182 (366)
T 3k26_A 116 ----NAINELKFHPRDPNLLLSVSKDH------ALRLWNIQTD-TLVAIF-GGVEGHRDEVLSADYDLLGEKIMSCGMD- 182 (366)
T ss_dssp ----SCEEEEEECSSCTTEEEEEETTS------CEEEEETTTT-EEEEEE-CSTTSCSSCEEEEEECTTSSEEEEEETT-
T ss_pred ----CcEEEEEECCCCCCEEEEEeCCC------eEEEEEeecC-eEEEEe-cccccccCceeEEEECCCCCEEEEecCC-
Confidence 11222222 2 667777777543 2444444433 212111 1101111222233332 45677777753
Q ss_pred CCCccccCCeEEEEECCCCe
Q 001901 355 GGRMVEDSSSVAVLDTAAGV 374 (998)
Q Consensus 355 ~~~~~~~~~dv~vyD~~t~~ 374 (998)
..+.+||+.+.+
T Consensus 183 --------g~i~i~d~~~~~ 194 (366)
T 3k26_A 183 --------HSLKLWRINSKR 194 (366)
T ss_dssp --------SCEEEEESCSHH
T ss_pred --------CCEEEEECCCCc
Confidence 348889988764
No 271
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=29.98 E-value=47 Score=38.73 Aligned_cols=66 Identities=21% Similarity=0.222 Sum_probs=38.5
Q ss_pred CeEEEecCCCCHH--------------------HHHHHHHHcCCCCCCCCccceeEEEeccccCCCCC-----hHHHHHH
Q 001901 699 PIKIFGDLHGQFG--------------------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQH-----SLETITL 753 (998)
Q Consensus 699 ~i~vvGDiHG~~~--------------------dL~~il~~~g~~~~~~~~~~~~~vfLGDyVDRG~~-----s~evl~l 753 (998)
.|+-+-|+||++. .|..++++..-... ..-+|.-||.+...+. ...++.+
T Consensus 5 tILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~-----n~llldaGD~~qGs~~~~~~~g~~~i~~ 79 (530)
T 4h1s_A 5 TILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEP-----NVLLLDAGDQYQGTIWFTVYKGAEVAHF 79 (530)
T ss_dssp EEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCS-----SEEEEECSCCSCSSHHHHHHTTHHHHHH
T ss_pred EEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCc-----CeEEEEeCCcccchHHHHHhCChHHHHH
Confidence 3666889999863 24444444321111 1246668999986542 2334555
Q ss_pred HHHhhhcCCCcEEEeecCccc
Q 001901 754 LLALKVEYPNNVHLIRGNHEA 774 (998)
Q Consensus 754 l~~lk~~~p~~v~llrGNHE~ 774 (998)
|=+|. -=.+..||||.
T Consensus 80 mN~lg-----yDa~~lGNHEF 95 (530)
T 4h1s_A 80 MNALR-----YDAMALGNHEF 95 (530)
T ss_dssp HHHTT-----CCEEECCGGGG
T ss_pred HhccC-----CCEEEEchhhh
Confidence 55553 34677899997
No 272
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=29.59 E-value=4.8e+02 Score=26.79 Aligned_cols=63 Identities=8% Similarity=0.046 Sum_probs=35.8
Q ss_pred CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEEC-CcEEEEEcCCCCCCCcccEEEEECCC
Q 001901 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAA 263 (998)
Q Consensus 185 ~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~-~~~Lyv~GG~~g~~~lndv~~yD~~s 263 (998)
+.+++.|+.+ ..+.+||+.+.. .-..+. + ....-.++.... ++.+++.|+.++ .+..||+.+
T Consensus 85 ~~~l~~~~~d------g~i~v~d~~~~~-~~~~~~--~---~~~~i~~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~ 147 (366)
T 3k26_A 85 HPLLAVAGSR------GIIRIINPITMQ-CIKHYV--G---HGNAINELKFHPRDPNLLLSVSKDH-----ALRLWNIQT 147 (366)
T ss_dssp CEEEEEEETT------CEEEEECTTTCC-EEEEEE--S---CCSCEEEEEECSSCTTEEEEEETTS-----CEEEEETTT
T ss_pred CCEEEEecCC------CEEEEEEchhce-Eeeeec--C---CCCcEEEEEECCCCCCEEEEEeCCC-----eEEEEEeec
Confidence 4677777752 468999988753 111221 1 111122233333 446777787654 588899987
Q ss_pred C
Q 001901 264 K 264 (998)
Q Consensus 264 ~ 264 (998)
.
T Consensus 148 ~ 148 (366)
T 3k26_A 148 D 148 (366)
T ss_dssp T
T ss_pred C
Confidence 7
No 273
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=28.75 E-value=3.5e+02 Score=29.49 Aligned_cols=26 Identities=19% Similarity=0.216 Sum_probs=16.3
Q ss_pred EEEECC-cEEEEEcCCCCCCCcccEEEEECCC
Q 001901 233 MALVGQ-RYLMAIGGNDGKRPLADVWALDTAA 263 (998)
Q Consensus 233 ~~~~~~-~~Lyv~GG~~g~~~lndv~~yD~~s 263 (998)
+....+ +.+++.|+.++ .+..||+.+
T Consensus 134 l~~~p~~~~~lat~~~dg-----~V~vwd~~~ 160 (430)
T 2xyi_A 134 ARYMPQNACVIATKTPSS-----DVLVFDYTK 160 (430)
T ss_dssp EEEETTEEEEEEEECSSS-----CEEEEEGGG
T ss_pred EEECCCCCcEEEEECCCC-----cEEEEECCC
Confidence 334443 46777777665 578888765
No 274
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=28.70 E-value=4.5e+02 Score=26.52 Aligned_cols=62 Identities=18% Similarity=0.282 Sum_probs=31.9
Q ss_pred CCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCC-CCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEec
Q 001901 237 GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEG-EGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAK 315 (998)
Q Consensus 237 ~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~-~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~ 315 (998)
.++.+|+|=| +.+|+++.......=..+...- ..| ..-.+|.. .++++|+|-| +..|.|+.
T Consensus 27 ~~g~~yfFkg-------~~~Wr~~~~~~~~~p~~Is~~wpgLP--~~IDAA~~-~~~~~yfFkG--------~~yw~~~~ 88 (219)
T 1hxn_A 27 NHGATYVFSG-------SHYWRLDTNRDGWHSWPIAHQWPQGP--STVDAAFS-WEDKLYLIQD--------TKVYVFLT 88 (219)
T ss_dssp TTSCEEEEET-------TEEEESSSSSCTTCCEEGGGTCTTSC--SSCSEEEE-ETTEEEEEET--------TEEEEEEC
T ss_pred CCCcEEEEeC-------CEEEEEcCCCCCCCceEhhhhccCCC--CCccEEEE-ECCcEEEecC--------CEEEEEeC
Confidence 3447999876 3567776543210001222211 112 22333333 4899999966 34677764
Q ss_pred C
Q 001901 316 H 316 (998)
Q Consensus 316 ~ 316 (998)
.
T Consensus 89 ~ 89 (219)
T 1hxn_A 89 K 89 (219)
T ss_dssp S
T ss_pred C
Confidence 3
No 275
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=27.88 E-value=4.6e+02 Score=26.09 Aligned_cols=181 Identities=9% Similarity=-0.041 Sum_probs=89.9
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeC-CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVG-TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~-~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R 228 (998)
+.+.+||+. .++..+.... ....-++++... +.+|+.... ...+++||.. . ++....... ...
T Consensus 41 ~~v~~~~~~-~~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~------~~~v~~~d~~-g--~~~~~~~~~---~~~ 104 (300)
T 2qc5_A 41 NKISSLDQS-GRIKEFEVPT---PDAKVMCLIVSSLGDIWFTENG------ANKIGKLSKK-G--GFTEYPLPQ---PDS 104 (300)
T ss_dssp TEEEEECTT-SCEEEEECSS---TTCCEEEEEECTTSCEEEEETT------TTEEEEECTT-S--CEEEEECSS---TTC
T ss_pred CeEEEECCC-CceEEEECCC---CCCcceeEEECCCCCEEEEecC------CCeEEEECCC-C--CeEEecCCC---CCC
Confidence 367788887 6666543211 112234444443 477776532 2458899987 3 355443111 112
Q ss_pred cccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcc
Q 001901 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (998)
Q Consensus 229 ~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~ 308 (998)
.-++++.-.++.+|+....+ +.+++||+. . +......... ...-...+.-.++++|+.... ..
T Consensus 105 ~~~~i~~~~~g~l~v~~~~~-----~~i~~~~~~-g--~~~~~~~~~~---~~~~~~i~~d~~g~l~v~~~~------~~ 167 (300)
T 2qc5_A 105 GPYGITEGLNGDIWFTQLNG-----DRIGKLTAD-G--TIYEYDLPNK---GSYPAFITLGSDNALWFTENQ------NN 167 (300)
T ss_dssp CEEEEEECSTTCEEEEETTT-----TEEEEECTT-S--CEEEEECSST---TCCEEEEEECTTSSEEEEETT------TT
T ss_pred CCccceECCCCCEEEEccCC-----CeEEEECCC-C--CEEEccCCCC---CCCceeEEECCCCCEEEEecC------CC
Confidence 23444444455788765322 368899987 5 3333221100 011122222245778876421 23
Q ss_pred cEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCCCeEEEc
Q 001901 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (998)
Q Consensus 309 dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v 378 (998)
.++.++. ++++.....+.. ...-.++++. ++.|||.... .+.+++||+ +.++..+
T Consensus 168 ~i~~~~~--~g~~~~~~~~~~---~~~~~~i~~d~~g~l~v~~~~---------~~~i~~~~~-~g~~~~~ 223 (300)
T 2qc5_A 168 SIGRITN--TGKLEEYPLPTN---AAAPVGITSGNDGALWFVEIM---------GNKIGRITT-TGEISEY 223 (300)
T ss_dssp EEEEECT--TCCEEEEECSST---TCCEEEEEECTTSSEEEEETT---------TTEEEEECT-TCCEEEE
T ss_pred eEEEECC--CCcEEEeeCCCC---CCCcceEEECCCCCEEEEccC---------CCEEEEEcC-CCcEEEE
Confidence 4677766 344443333211 1122233333 5678876421 245899998 6666554
No 276
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=27.51 E-value=7.2e+02 Score=28.18 Aligned_cols=60 Identities=17% Similarity=0.132 Sum_probs=32.0
Q ss_pred cCCcEEEEECCCC----cEEEec-------CCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCC
Q 001901 148 ATADVHCYDVLTN----KWSRIT-------PFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQ 211 (998)
Q Consensus 148 ~~~dv~~yD~~t~----~W~~l~-------~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~ 211 (998)
..+.++++|..++ +-.+.. ..| ..| -|+..+..+.|||----+..+.....+.++|..+.
T Consensus 104 ~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g---~s~-Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~T~ 174 (462)
T 2ece_A 104 RSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSG---YSR-LHTVHCGPDAIYISALGNEEGEGPGGILMLDHYSF 174 (462)
T ss_dssp TTCCEEEEECCSCTTSCEEEEEECHHHHHHHHC---EEE-EEEEEECSSCEEEEEEEETTSCSCCEEEEECTTTC
T ss_pred CCCeEEEEECCCCCCCceeeeeechhhcccccC---CCc-ccceeECCCeEEEEcCCCcCCCCCCeEEEEECCCC
Confidence 3458999999876 333322 111 112 34444443325553211123344578999999985
No 277
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=26.58 E-value=6.3e+02 Score=27.17 Aligned_cols=195 Identities=11% Similarity=0.085 Sum_probs=94.6
Q ss_pred cEEEEECCC--CcEEEecCCCCCCCCccceEEEEe---CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCC
Q 001901 151 DVHCYDVLT--NKWSRITPFGEPPTPRAAHVATAV---GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (998)
Q Consensus 151 dv~~yD~~t--~~W~~l~~~g~~P~pR~~hsa~~~---~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P 225 (998)
-+++|+... .+|+.+... +....-++++.. .+.||+.+..+.. -.-+++.+-... .|+.+......+
T Consensus 32 Gl~~~~~~~~g~~W~~~~~~---~~~~~v~~i~~dp~~~~~l~~g~~~g~~---g~gl~~s~D~G~--tW~~~~~~~~~~ 103 (394)
T 3b7f_A 32 GAWFLASDPARRTWELRGPV---FLGHTIHHIVQDPREPERMLMAARTGHL---GPTVFRSDDGGG--NWTEATRPPAFN 103 (394)
T ss_dssp EEEEEEECTTSCSEEEEEEE---STTSEEEEEEECSSSTTCEEEEEEC--C---CEEEEEESSTTS--CCEECSBCCCCC
T ss_pred ceEEEECCCCCCCceECCcc---CCCCceEEEEECCCCCCeEEEEecCCCC---CccEEEeCCCCC--CceECCccccCC
Confidence 366777655 689987421 122334555554 3478876543111 124666544444 499876321122
Q ss_pred CC--C-----ccc--EEEEE--C-CcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCC-------------C
Q 001901 226 GP--R-----YGH--VMALV--G-QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPP-------------P 280 (998)
Q Consensus 226 ~~--R-----~~h--s~~~~--~-~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~-------------~ 280 (998)
.. + ..+ ++++. + .+.||+.+. ..-+++.+-... +|+.+......|. .
T Consensus 104 ~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~------~ggl~~S~DgG~--tW~~~~~~~~~p~~~~~~~~~~~g~~~ 175 (394)
T 3b7f_A 104 KAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS------PQGLFRSTDHGA--SWEPVAGFNDHPMRRAWTGGEQDGTPD 175 (394)
T ss_dssp CCC----CCCCCEEEEEEECCTTSTTCEEEEEE------TTEEEEESSTTS--BCEECHHHHTCTTHHHHHCCC----CC
T ss_pred CcccccccccccceeEEEeCCCCCCCEEEEEec------CCcEEEEcCCCC--CeEECcCccCCccccccccccccCCCC
Confidence 11 1 112 22222 1 346777542 135788877667 8998853211111 0
Q ss_pred ccceEEEEEe---CCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCC---CCCCC-----cceeEEEEEC---CEE
Q 001901 281 CMYATASARS---DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPG---VSPSP-----RYQHAAVFVN---ARL 346 (998)
Q Consensus 281 r~~~~a~~~~---~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g---~~P~p-----R~~hsav~~~---~~L 346 (998)
.....++.+. .+.||+.... ..++...+.. .+|+...... ..|.+ ...+.+++.. +.|
T Consensus 176 ~~~i~~i~~d~~~~~~l~vg~~~-------ggl~~s~DgG-~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l 247 (394)
T 3b7f_A 176 GPKMHSILVDPRDPKHLYIGMSS-------GGVFESTDAG-TDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDIL 247 (394)
T ss_dssp CCEEEEEEECTTCTTCEEEEEET-------BEEEEESSTT-SSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEE
T ss_pred CCceeEEEECCCCCCEEEEEECC-------CCEEEECCCC-CCceECCCCccccccCCCccccCcceeEEEECCCCCCEE
Confidence 1112233332 3577775431 2355554443 3565443211 11211 2234444442 567
Q ss_pred EEEcccCCCCCccccCCeEEEEECCCCeEEEccc
Q 001901 347 HVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKS 380 (998)
Q Consensus 347 ~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~v~~ 380 (998)
|+.. ...+++++-...+|+.+..
T Consensus 248 ~vg~-----------~~gl~~s~D~G~tW~~~~~ 270 (394)
T 3b7f_A 248 YQQN-----------HCGIYRMDRREGVWKRIGD 270 (394)
T ss_dssp EEEE-----------TTEEEEEETTTTEEECGGG
T ss_pred EEEc-----------CCeEEEeCCCCCcceECCC
Confidence 7632 1348889988999998864
No 278
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=26.09 E-value=5.4e+02 Score=26.22 Aligned_cols=72 Identities=10% Similarity=0.107 Sum_probs=37.3
Q ss_pred CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcE-EEEEcCCCCCCCcccEEEEEC-C
Q 001901 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRY-LMAIGGNDGKRPLADVWALDT-A 262 (998)
Q Consensus 185 ~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~-Lyv~GG~~g~~~lndv~~yD~-~ 262 (998)
+.+++.|+. ...+.+||+.+........... .....-.+++...++. +++.|+.++ .+..||+ .
T Consensus 23 ~~~l~~~~~------d~~v~iw~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~~wd~~~ 88 (342)
T 1yfq_A 23 KSLLLITSW------DGSLTVYKFDIQAKNVDLLQSL---RYKHPLLCCNFIDNTDLQIYVGTVQG-----EILKVDLIG 88 (342)
T ss_dssp GTEEEEEET------TSEEEEEEEETTTTEEEEEEEE---ECSSCEEEEEEEESSSEEEEEEETTS-----CEEEECSSS
T ss_pred CCEEEEEcC------CCeEEEEEeCCCCccccceeee---ecCCceEEEEECCCCCcEEEEEcCCC-----eEEEEEecc
Confidence 344555553 2468888887653111111111 1112223333443446 777777654 6888998 7
Q ss_pred CCCceEEEcc
Q 001901 263 AKPYEWRKLE 272 (998)
Q Consensus 263 s~~~~W~~v~ 272 (998)
+. ....+.
T Consensus 89 ~~--~~~~~~ 96 (342)
T 1yfq_A 89 SP--SFQALT 96 (342)
T ss_dssp SS--SEEECB
T ss_pred CC--ceEecc
Confidence 77 555443
No 279
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=26.05 E-value=1e+03 Score=29.46 Aligned_cols=198 Identities=10% Similarity=0.008 Sum_probs=95.8
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~ 227 (998)
.++|++|+.+.+..++.... . .-....+ +++.+++...........++|++|+.+. +-.++...+.....
T Consensus 33 ~~l~~~~~~gg~~~~lt~~~----~--~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g--~~~~lt~~~~~~~~ 104 (1045)
T 1k32_A 33 DDLWEHDLKSGSTRKIVSNL----G--VINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENG--EIKRITYFSGKSTG 104 (1045)
T ss_dssp TEEEEEETTTCCEEEEECSS----S--EEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTT--EEEECCCCCEEEET
T ss_pred CcEEEEECCCCcEEEeeeCC----C--cccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCC--CeEEcccCCCcccc
Confidence 37899999988877776431 1 1222333 4444444432111112357999998875 23333210000000
Q ss_pred Cc-c-cEEEEECCcEEEEEcCCCCC-CCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCC-
Q 001901 228 RY-G-HVMALVGQRYLMAIGGNDGK-RPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDAS- 303 (998)
Q Consensus 228 R~-~-hs~~~~~~~~Lyv~GG~~g~-~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~- 303 (998)
|. . .+.+.-.++++++.+..+.. .....+|.+|+.+. ....+.... .. ...... + +++.|..+..
T Consensus 105 ~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g--~~~~l~~~~------~~-~~~~sp-G-~l~~~~~~~~~ 173 (1045)
T 1k32_A 105 RRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGI--NFVPLNLGP------AT-HILFAD-G-RRVIGRNTFEL 173 (1045)
T ss_dssp TEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGT--EEEECCSCS------CS-EEEEET-T-EEEEEESCSCC
T ss_pred cccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCC--CeEEecCCC------cc-eeeeCC-C-EEEEeccCCCc
Confidence 11 1 22223334456555554322 23457999999887 666554321 11 122223 5 5555542211
Q ss_pred -------CCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEE
Q 001901 304 -------SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (998)
Q Consensus 304 -------~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~ 376 (998)
......+|..... +..... .+ ........++.++++++.+..++ ...+|.+|+.+..-.
T Consensus 174 ~~~~~~~g~~~~~lw~~~~~--~~~~~l--~~---~~~~v~~~~~s~d~l~~~~~~dg-------~~~l~~~~~~g~~~~ 239 (1045)
T 1k32_A 174 PHWKGYRGGTRGKIWIEVNS--GAFKKI--VD---MSTHVSSPVIVGHRIYFITDIDG-------FGQIYSTDLDGKDLR 239 (1045)
T ss_dssp TTSTTCCSTTCCEEEEEEET--TEEEEE--EC---CSSCCEEEEEETTEEEEEECTTS-------SCEEEEEETTSCSCE
T ss_pred cccccccCCCcCCEEEECCC--CCeEEC--cC---CCCcccceEEeCCEEEEEEeccC-------ceEEEEEeCCCCcce
Confidence 1123456654443 333333 22 12223344555777777765432 346999998776655
Q ss_pred Eccc
Q 001901 377 DTKS 380 (998)
Q Consensus 377 ~v~~ 380 (998)
.+..
T Consensus 240 ~l~~ 243 (1045)
T 1k32_A 240 KHTS 243 (1045)
T ss_dssp ECCC
T ss_pred EecC
Confidence 5543
No 280
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=25.87 E-value=5.8e+02 Score=26.51 Aligned_cols=203 Identities=11% Similarity=0.012 Sum_probs=100.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeec---CCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ---GPGP 225 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~---g~~P 225 (998)
+.++++|+.+.+.......+. -..-+++++. ++.+||.... ...+++||.......-..+... |...
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~---~~~p~gia~d~~g~l~v~d~~------~~~v~~~~~~g~~~~~~~~~~~~~~g~~~ 139 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNL---FYLPHGLSIDTDGNYWVTDVA------LHQVFKLDPHSKEGPLLILGRSMQPGSDQ 139 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTT---CSSEEEEEECTTSCEEEEETT------TTEEEEECTTCSSCCSEEESBTTBCCCST
T ss_pred CcEEEEECCCCeEEeccCCCc---cCCceEEEECCCCCEEEEECC------CCEEEEEeCCCCeEEEEEecccCCCCCCc
Confidence 579999998877654433211 1122344444 3478887643 2568999986541001122111 1101
Q ss_pred CCC-cccEEEEEC-CcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCC----CCCccceEEEEE-eC-CEEEEE
Q 001901 226 GPR-YGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEG----PPPCMYATASAR-SD-GLLLLC 297 (998)
Q Consensus 226 ~~R-~~hs~~~~~-~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~----P~~r~~~~a~~~-~~-~~lyvf 297 (998)
... .-..+++-. ++.||+..+.. .+.+.+||.... .-..+...+.. +.....-..+++ .+ +.||+.
T Consensus 140 ~~~~~P~~ia~~~~~g~lyv~d~~~----~~~I~~~~~~g~--~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~ 213 (329)
T 3fvz_A 140 NHFCQPTDVAVEPSTGAVFVSDGYC----NSRIVQFSPSGK--FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVA 213 (329)
T ss_dssp TCCSSEEEEEECTTTCCEEEEECSS----CCEEEEECTTSC--EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEE
T ss_pred cccCCCcEEEEeCCCCeEEEEeCCC----CCeEEEEcCCCC--EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEE
Confidence 111 122344443 55899987521 247889996543 22222211111 111111222333 34 899998
Q ss_pred eccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEECCEEEEEcccCCCCCccccCCeEEEEECCCCeEEE
Q 001901 298 GGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (998)
Q Consensus 298 GG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~~ 377 (998)
... ...+..|+.. +++........ .....-.+.++..+.+|+..|...-.. .....++++|+.+.+...
T Consensus 214 d~~------~~~I~~~~~~-~G~~~~~~~~~--~~~~~~~~~~~~pg~~~~~~g~~~v~~--~~~~~v~~~~~~~g~~~~ 282 (329)
T 3fvz_A 214 DRE------NGRIQCFKTD-TKEFVREIKHA--SFGRNVFAISYIPGFLFAVNGKPYFGD--QEPVQGFVMNFSSGEIID 282 (329)
T ss_dssp ETT------TTEEEEEETT-TCCEEEEECCT--TTTTCEEEEEEETTEEEEEECCCCTTC--SCCCCEEEEETTTCCEEE
T ss_pred ECC------CCEEEEEECC-CCcEEEEEecc--ccCCCcceeeecCCEEEEeCCCEEecc--CCCcEEEEEEcCCCeEEE
Confidence 643 2345666655 23443333221 112222344555578888777532111 224579999998887655
Q ss_pred c
Q 001901 378 T 378 (998)
Q Consensus 378 v 378 (998)
.
T Consensus 283 ~ 283 (329)
T 3fvz_A 283 V 283 (329)
T ss_dssp E
T ss_pred E
Confidence 4
No 281
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=25.21 E-value=5.7e+02 Score=26.18 Aligned_cols=192 Identities=10% Similarity=0.006 Sum_probs=86.0
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeec-CCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ-GPGPGP 227 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~-g~~P~~ 227 (998)
+.+++||+ +...+.+... . ...++.+.. ++++|+.... ...+++||... +.+.+... ...+.
T Consensus 67 ~~i~~~~~-~g~~~~~~~~----~-~~~~gl~~d~dG~l~v~~~~------~~~v~~~~~~g---~~~~~~~~~~~~~~- 130 (305)
T 3dr2_A 67 RRVLGWRE-DGTVDVLLDA----T-AFTNGNAVDAQQRLVHCEHG------RRAITRSDADG---QAHLLVGRYAGKRL- 130 (305)
T ss_dssp TEEEEEET-TSCEEEEEES----C-SCEEEEEECTTSCEEEEETT------TTEEEEECTTS---CEEEEECEETTEEC-
T ss_pred CEEEEEeC-CCCEEEEeCC----C-CccceeeECCCCCEEEEECC------CCEEEEECCCC---CEEEEEeccCCCcc-
Confidence 46788888 4554444321 1 112333333 3477766321 13588888763 35544311 11111
Q ss_pred CcccEEEEECCcEEEEE----cCCCC--------CCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCC-EE
Q 001901 228 RYGHVMALVGQRYLMAI----GGNDG--------KRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDG-LL 294 (998)
Q Consensus 228 R~~hs~~~~~~~~Lyv~----GG~~g--------~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~-~l 294 (998)
..-+.+++-.++.||+. |-... ......+++||+.+. +++.+. ... .-...+...++ .|
T Consensus 131 ~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g--~~~~~~-~~~-----~p~gl~~spdg~~l 202 (305)
T 3dr2_A 131 NSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGS--PLQRMA-DLD-----HPNGLAFSPDEQTL 202 (305)
T ss_dssp SCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSC--CCEEEE-EES-----SEEEEEECTTSSEE
T ss_pred CCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCC--cEEEEe-cCC-----CCcceEEcCCCCEE
Confidence 11223444455578874 43211 011357999999877 555543 111 11122223344 57
Q ss_pred EEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEE-ECCEEEEEcccCCCCCccccCCeEEEEECCCC
Q 001901 295 LLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVF-VNARLHVSGGALGGGRMVEDSSSVAVLDTAAG 373 (998)
Q Consensus 295 yvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~-~~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~ 373 (998)
|+........ ....++.|+....+ ..-...-...+. ..-.+.++ -+++|||..+ ..|++||+...
T Consensus 203 yv~~~~~~~~-~~~~i~~~~~~~~~-l~~~~~~~~~~~-~~pdgi~~d~~G~lwv~~~-----------~gv~~~~~~g~ 268 (305)
T 3dr2_A 203 YVSQTPEQGH-GSVEITAFAWRDGA-LHDRRHFASVPD-GLPDGFCVDRGGWLWSSSG-----------TGVCVFDSDGQ 268 (305)
T ss_dssp EEEECCC----CCCEEEEEEEETTE-EEEEEEEECCSS-SCCCSEEECTTSCEEECCS-----------SEEEEECTTSC
T ss_pred EEEecCCcCC-CCCEEEEEEecCCC-ccCCeEEEECCC-CCCCeEEECCCCCEEEecC-----------CcEEEECCCCC
Confidence 7764321100 12456777655432 111111000000 01112222 2467777531 24899999766
Q ss_pred eEEEcc
Q 001901 374 VWCDTK 379 (998)
Q Consensus 374 ~W~~v~ 379 (998)
.-..+.
T Consensus 269 ~~~~~~ 274 (305)
T 3dr2_A 269 LLGHIP 274 (305)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 554443
No 282
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=24.57 E-value=3.2e+02 Score=30.07 Aligned_cols=64 Identities=11% Similarity=0.088 Sum_probs=35.9
Q ss_pred cccEEEEECCcEEEEEcCCC----CCC-CcccEEEEEC-CCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEecc
Q 001901 229 YGHVMALVGQRYLMAIGGND----GKR-PLADVWALDT-AAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 300 (998)
Q Consensus 229 ~~hs~~~~~~~~Lyv~GG~~----g~~-~lndv~~yD~-~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~ 300 (998)
..|++++..++.+|.+|-.. +.. ...+...--. .... .+..+.. ...|++++..++.+|.+|-.
T Consensus 295 ~~hs~al~~~G~v~~wG~n~~GqLG~g~~~~~~~~P~~v~~l~-~v~~v~~-------G~~hs~alt~~G~v~~wG~n 364 (413)
T 1a12_A 295 QHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLP-AVSSVAC-------GASVGYAVTKDGRVFAWGMG 364 (413)
T ss_dssp SSEEEEEETTSCEEEEECCGGGTTCSCTTCCCEEEEEECCSSS-SEEEEEE-------CSSEEEEEETTSCEEEEECC
T ss_pred cceEEEEeCCCCEEEeeCCCCCccCCCCCCccccCCEEecccC-ceeEEEE-------CcceEEEEeCCCCEEEecCC
Confidence 57888888888999999542 111 1111111100 0000 2333332 24577777889999999854
No 283
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=23.96 E-value=6.2e+02 Score=26.22 Aligned_cols=64 Identities=13% Similarity=-0.022 Sum_probs=38.2
Q ss_pred CEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 185 ~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
+.+++.|+.+ ..+.+||+.+.. -.... .......-.+++...++.+++.|+.++ .+..||+.+.
T Consensus 139 ~~~l~s~s~d------g~i~~wd~~~~~--~~~~~---~~~~~~~i~~~~~~pdg~~lasg~~dg-----~i~iwd~~~~ 202 (343)
T 3lrv_A 139 TEYFIWADNR------GTIGFQSYEDDS--QYIVH---SAKSDVEYSSGVLHKDSLLLALYSPDG-----ILDVYNLSSP 202 (343)
T ss_dssp CCEEEEEETT------CCEEEEESSSSC--EEEEE---CCCSSCCCCEEEECTTSCEEEEECTTS-----CEEEEESSCT
T ss_pred CCEEEEEeCC------CcEEEEECCCCc--EEEEE---ecCCCCceEEEEECCCCCEEEEEcCCC-----EEEEEECCCC
Confidence 4566667642 468999998764 22222 111121233444455557888888765 6888999876
No 284
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=23.93 E-value=20 Score=39.42 Aligned_cols=143 Identities=10% Similarity=0.067 Sum_probs=0.0
Q ss_pred CceEEEEccCCcCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCccccccccCCcEEEEECCCCc--EEEecCCCCC
Q 001901 94 GHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNK--WSRITPFGEP 171 (998)
Q Consensus 94 ght~t~v~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~--W~~l~~~g~~ 171 (998)
|++.-++ .+..+++|+ ....++.+|..+++ |+.-. .
T Consensus 1 g~ssP~v------------~~~~v~~gs--------------------------~dg~v~a~d~~tG~~~W~~~~-~--- 38 (369)
T 2hz6_A 1 GSSTVTL------------PETLLFVST--------------------------LDGSLHAVSKRTGSIKWTLKE-D--- 38 (369)
T ss_dssp -------------------CTTEEEEEE--------------------------TTSEEEEEETTTCCEEEEEEC-C---
T ss_pred CCCCCee------------eCCEEEEEc--------------------------CCCEEEEEECCCCCEEEEecC-C---
Q ss_pred CCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCC
Q 001901 172 PTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKR 251 (998)
Q Consensus 172 P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~ 251 (998)
....+.++.++.+|+.|+.+ ..++.||..+....|..-. ..+......-+...++ .+++|+.++
T Consensus 39 ---~~~s~p~~~~g~~~v~~s~d------g~l~a~d~~tG~~~w~~~~---~~~~~~~~sp~~~~~~--~v~~g~~dg-- 102 (369)
T 2hz6_A 39 ---PVLQVPTHVEEPAFLPDPND------GSLYTLGSKNNEGLTKLPF---TIPELVQASPCRSSDG--ILYMGKKQD-- 102 (369)
T ss_dssp ---CSCCCC-----CCEEECTTT------CCEEEC-----CCSEECSC---CHHHHHTTCSCC-------CCCCEEEE--
T ss_pred ---CceecceEcCCCEEEEeCCC------CEEEEEECCCCceeeeeec---cCccccccCceEecCC--EEEEEeCCC--
Q ss_pred CcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEE
Q 001901 252 PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLC 297 (998)
Q Consensus 252 ~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvf 297 (998)
.++.||+.+....|+.-......-.+......+...++.|+++
T Consensus 103 ---~v~a~D~~tG~~~w~~~~~~~~~~~p~~~~v~~~~~dg~v~a~ 145 (369)
T 2hz6_A 103 ---IWYVIDLLTGEKQQTLSSAFADSLSPSTSLLYLGRTEYTITMY 145 (369)
T ss_dssp ---EEEEECCC----------------------EEEEEEEEEEECC
T ss_pred ---EEEEEECCCCcEEEEecCCCcccccccCCEEEEEecCCEEEEE
No 285
>3c0t_A Mediator of RNA polymerase II transcription subunit 18; beta barrel, channel, protein-protein complex, activator, nucleus; 2.40A {Schizosaccharomyces pombe}
Probab=23.75 E-value=57 Score=32.89 Aligned_cols=39 Identities=21% Similarity=0.448 Sum_probs=33.0
Q ss_pred eeCHHHHHHHHHHcCCcEEEEcccccccceEEecCCeEEEEe
Q 001901 881 TFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLF 922 (998)
Q Consensus 881 ~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvf 922 (998)
.+....+-+|++..|+++. ||++..||.|..++-.|+|+
T Consensus 103 ~~~sgdv~~fl~~lG~~~~---~EYv~~G~~f~~g~~kI~l~ 141 (207)
T 3c0t_A 103 KLTNGSVTEFVEKMGYEFS---HEYIIQGLEYFFFDTTVRIY 141 (207)
T ss_dssp EECSSCHHHHHHHTTEEEE---EEEEEEEEEEEETTEEEEEE
T ss_pred cccCCCHHHHHHHhCcceE---EEEEEeeeEEEeCCEEEEEE
Confidence 3555678899999999964 99999999999999888775
No 286
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=23.51 E-value=7.4e+02 Score=26.97 Aligned_cols=194 Identities=13% Similarity=0.081 Sum_probs=94.3
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCC
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~ 227 (998)
..++++|+.++.-..+...+ .. .+ .+.. ++.+|+...... ..++++|..+.. ....+..... +..
T Consensus 152 ~~I~~id~~~g~~~~~~~~~--~~---~~-ia~~~~g~~l~~~d~~~~-----~~I~~~d~~~~~-~~~~~g~~~~-~~~ 218 (409)
T 3hrp_A 152 PRVRLISVDDNKVTTVHPGF--KG---GK-PAVTKDKQRVYSIGWEGT-----HTVYVYMKASGW-APTRIGQLGS-TFS 218 (409)
T ss_dssp TEEEEEETTTTEEEEEEETC--CB---CB-CEECTTSSEEEEEBSSTT-----CEEEEEEGGGTT-CEEEEEECCT-TSC
T ss_pred CcEEEEECCCCEEEEeeccC--CC---Cc-eeEecCCCcEEEEecCCC-----ceEEEEEcCCCc-eeEEeeeccc-hhc
Confidence 36788888877766654332 11 23 3332 346666654211 179999988652 2223311111 122
Q ss_pred CcccEEEEEC-CcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccc--eEEEEEe-CCEEEEEeccCCC
Q 001901 228 RYGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMY--ATASARS-DGLLLLCGGRDAS 303 (998)
Q Consensus 228 R~~hs~~~~~-~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~--~~a~~~~-~~~lyvfGG~~~~ 303 (998)
..-+++++.. ++.||+... ...+++||+.+. ....+............ ...++-. ++.||+....
T Consensus 219 ~~p~~iav~p~~g~lyv~d~------~~~I~~~d~~~~--~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~--- 287 (409)
T 3hrp_A 219 GKIGAVALDETEEWLYFVDS------NKNFGRFNVKTQ--EVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN--- 287 (409)
T ss_dssp SCCCBCEECTTSSEEEEECT------TCEEEEEETTTC--CEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT---
T ss_pred CCcEEEEEeCCCCeEEEEEC------CCcEEEEECCCC--CEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC---
Confidence 2334455544 558888432 237999999877 44433111111111111 1233333 6899987432
Q ss_pred CCCcccEEEEecCCCCeEEEEECCC----CCC----CC--cceeEEEEE-CCEEEEEcccCCCCCccccCCeEEEEECCC
Q 001901 304 SVPLASAYGLAKHRDGRWEWAIAPG----VSP----SP--RYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAA 372 (998)
Q Consensus 304 ~~~~~dv~~~~~~~~~~W~w~~~~g----~~P----~p--R~~hsav~~-~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t 372 (998)
.+.++.++.... .....-.. ... .. ..-.++++. ++.|||.... ....|.++|+.+
T Consensus 288 ---~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~--------~~~~I~~~~~~~ 354 (409)
T 3hrp_A 288 ---LSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGF--------KGYCLRKLDILD 354 (409)
T ss_dssp ---TTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETT--------TTCEEEEEETTT
T ss_pred ---CCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCC--------CCCEEEEEECCC
Confidence 345666654432 22111111 000 00 112233333 4679988430 134599999777
Q ss_pred CeEEEccc
Q 001901 373 GVWCDTKS 380 (998)
Q Consensus 373 ~~W~~v~~ 380 (998)
.+...+..
T Consensus 355 G~v~~~~g 362 (409)
T 3hrp_A 355 GYVSTVAG 362 (409)
T ss_dssp TEEEEEEE
T ss_pred CEEEEEeC
Confidence 77665544
No 287
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=22.61 E-value=8.4e+02 Score=27.25 Aligned_cols=105 Identities=9% Similarity=-0.012 Sum_probs=51.7
Q ss_pred EEEEEcCC-CCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCC
Q 001901 240 YLMAIGGN-DGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRD 318 (998)
Q Consensus 240 ~Lyv~GG~-~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~ 318 (998)
.+++.|+. ++ .+..||+.+. +... ..... ........+...++++++.|+.++. +..|+....
T Consensus 457 ~~l~~~~~~d~-----~i~~~~~~~~--~~~~-~~~~~--~~~~v~~~~~s~~g~~l~~~~~dg~------i~iw~~~~~ 520 (615)
T 1pgu_A 457 NYVAVGLEEGN-----TIQVFKLSDL--EVSF-DLKTP--LRAKPSYISISPSETYIAAGDVMGK------ILLYDLQSR 520 (615)
T ss_dssp SEEEEEETTTS-----CEEEEETTEE--EEEE-ECSSC--CSSCEEEEEECTTSSEEEEEETTSC------EEEEETTTT
T ss_pred CEEEEeecCCC-----eEEEEECCCc--cccc-cccCC--ccCceEEEEECCCCCEEEEcCCCCe------EEEeeCCCC
Confidence 46666665 43 5888999776 4432 11111 0111122223347778888876432 444444433
Q ss_pred CeEEEEECCCCCCCCcceeEEEEE-----------CCEEEEEcccCCCCCccccCCeEEEEECCCC
Q 001901 319 GRWEWAIAPGVSPSPRYQHAAVFV-----------NARLHVSGGALGGGRMVEDSSSVAVLDTAAG 373 (998)
Q Consensus 319 ~~W~w~~~~g~~P~pR~~hsav~~-----------~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~ 373 (998)
.....-.. .....-.++++. ++++++.|+.++ .+.+||..+.
T Consensus 521 ---~~~~~~~~-~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg---------~i~iw~~~~~ 573 (615)
T 1pgu_A 521 ---EVKTSRWA-FRTSKINAISWKPAEKGANEEEIEEDLVATGSLDT---------NIFIYSVKRP 573 (615)
T ss_dssp ---EEEECCSC-CCSSCEEEEEECCCC------CCSCCEEEEEETTS---------CEEEEESSCT
T ss_pred ---cceeEeec-CCCCceeEEEEcCccccccccccCCCEEEEEcCCC---------cEEEEECCCC
Confidence 22222110 011111222222 577888887543 4889998875
No 288
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=22.23 E-value=6e+02 Score=25.42 Aligned_cols=94 Identities=19% Similarity=0.184 Sum_probs=43.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCc
Q 001901 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (998)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~ 229 (998)
..+.++|..+++-...... ... ........+.+++.|+.. ..+..++..... .......+ ....
T Consensus 89 g~v~iw~~~~~~~~~~~~~---h~~--~~~~~~~~~~~l~s~~~~------~~~~~~~~~~~~--~~~~~~~~---~~~~ 152 (318)
T 4ggc_A 89 AEVQLWDVQQQKRLRNMTS---HSA--RVGSLSWNSYILSSGSRS------GHIHHHDVRVAE--HHVATLSG---HSQE 152 (318)
T ss_dssp SEEEEEETTTTEEEEEEEC---CSS--CEEEEEEETTEEEEEETT------SEEEEEETTSSS--CEEEEEEC---CSSC
T ss_pred CcEEEeecCCceeEEEecC---ccc--eEEEeecCCCEEEEEecC------CceEeeecCCCc--eeEEEEcC---ccCc
Confidence 3678889888764333221 111 122233344455555532 345566665542 11111111 1111
Q ss_pred ccEEEEECCcEEEEEcCCCCCCCcccEEEEECCCC
Q 001901 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 230 ~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
-.......++.+++.|+.++ .+..||+.+.
T Consensus 153 ~~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~ 182 (318)
T 4ggc_A 153 VCGLRWAPDGRHLASGGNDN-----LVNVWPSAPG 182 (318)
T ss_dssp EEEEEECTTSSEEEEEETTS-----CEEEEESSCB
T ss_pred eEEEEEcCCCCEEEEEecCc-----ceeEEECCCC
Confidence 22223333345667777654 4677888664
No 289
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=22.17 E-value=8.8e+02 Score=27.36 Aligned_cols=59 Identities=8% Similarity=-0.035 Sum_probs=36.6
Q ss_pred CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCC
Q 001901 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (998)
Q Consensus 184 ~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s 263 (998)
++++|+|-| +..|+||..+.+ ...-. -..+| .. -++....+ ++|+|-| +..|+||..+
T Consensus 158 ~~~~yfFkG--------~~yw~yd~~~~~--~~~~~-w~gi~--~i-DAA~~~~g-~~YfFkG-------~~y~rfd~~~ 215 (460)
T 1qhu_A 158 DEGILFFQG--------NRKWFWDLTTGT--KKERS-WPAVG--NC-TSALRWLG-RYYCFQG-------NQFLRFNPVS 215 (460)
T ss_dssp SSEEEEEET--------TEEEEEETTTTE--EEEEC-CTTSC--CC-SEEEEETT-EEEEEET-------TEEEEECTTT
T ss_pred CCeEEEEec--------ccEEEEecccce--eeccc-CCCCC--cc-chheeeCC-ceEEEEC-------CEEEEEcCcc
Confidence 568899987 468999988752 22111 11222 22 34444454 8999988 4678888765
Q ss_pred C
Q 001901 264 K 264 (998)
Q Consensus 264 ~ 264 (998)
.
T Consensus 216 ~ 216 (460)
T 1qhu_A 216 G 216 (460)
T ss_dssp C
T ss_pred C
Confidence 4
No 290
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=21.88 E-value=8e+02 Score=26.73 Aligned_cols=63 Identities=16% Similarity=0.205 Sum_probs=33.7
Q ss_pred ceEEEEeC-CEEEEEeC-CCCCCC-----CcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCC
Q 001901 177 AHVATAVG-TMVVIQGG-IGPAGL-----SAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGN 247 (998)
Q Consensus 177 ~hsa~~~~-~~lyVfGG-~~~~~~-----~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~ 247 (998)
.|++++.. +.||.+|- .+..+. ..+...-..+... .+...+. .-..|++++..++.+|.+|-.
T Consensus 137 ~hs~al~~~G~v~~wG~~~n~~GqlG~~~~~~~~~p~~~~~~-~~i~~va-------~G~~hs~alt~~G~v~~wG~n 206 (423)
T 3mvd_K 137 SHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDLMEG-TVCCSIA-------SGADHLVILTTAGKVFTVGCA 206 (423)
T ss_dssp SEEEEEETTSCEEEEECEECSSSEEESBTTBCEEEEEESSTT-CCEEEEE-------ECSSEEEEEETTSCEEEEECC
T ss_pred CeEEEEeCCCeEEEEeCCCCCCCCcCcCCCCCCceeeEecCC-CcEEEEe-------cCCCeEEEEecCCeEEEeeCC
Confidence 67777775 49999994 111111 0111111111111 1244443 235788888888899999944
No 291
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=21.74 E-value=6.1e+02 Score=25.34 Aligned_cols=52 Identities=13% Similarity=0.157 Sum_probs=30.8
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeCCCCCCCCcccEEEEEcCCC
Q 001901 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQ 211 (998)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~~~dv~~~Dl~t~ 211 (998)
.+.++|+.+++..++-... .....-.++.+ ++..++.|+.+ ..+.+||+.+.
T Consensus 46 tV~iWd~~tg~~~~~~~~~---~~~~~V~~v~~~~~~~~l~sgs~D------g~v~iw~~~~~ 99 (318)
T 4ggc_A 46 SVYLWSASSGDILQLLQME---QPGEYISSVAWIKEGNYLAVGTSS------AEVQLWDVQQQ 99 (318)
T ss_dssp EEEEEETTTCCEEEEEECC---STTCCEEEEEECTTSSEEEEEETT------SEEEEEETTTT
T ss_pred EEEEEECCCCCEEEEEEec---CCCCeEEEEEECCCCCEEEEEECC------CcEEEeecCCc
Confidence 6889999998866543221 11111122222 34666777642 46889999875
No 292
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=21.73 E-value=6.7e+02 Score=26.71 Aligned_cols=110 Identities=13% Similarity=0.100 Sum_probs=54.2
Q ss_pred EECCcEEEEEcCCCCCCCcccEEEEECCCCCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEe
Q 001901 235 LVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLA 314 (998)
Q Consensus 235 ~~~~~~Lyv~GG~~g~~~lndv~~yD~~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~ 314 (998)
.-.++.+++.|+.++ .+..||+.+. +-...-.... ..........++..++.|+.++ .+..++
T Consensus 131 ~s~dg~~l~s~~~d~-----~i~iwd~~~~--~~~~~~~~h~----~~v~~~~~~p~~~~l~s~s~d~------~v~iwd 193 (393)
T 1erj_A 131 FSPDGKFLATGAEDR-----LIRIWDIENR--KIVMILQGHE----QDIYSLDYFPSGDKLVSGSGDR------TVRIWD 193 (393)
T ss_dssp ECTTSSEEEEEETTS-----CEEEEETTTT--EEEEEECCCS----SCEEEEEECTTSSEEEEEETTS------EEEEEE
T ss_pred ECCCCCEEEEEcCCC-----eEEEEECCCC--cEEEEEccCC----CCEEEEEEcCCCCEEEEecCCC------cEEEEE
Confidence 334446777777664 6788899877 4433211111 1111222233566667776543 233333
Q ss_pred cCCCCeEEEEECCCCCCCCcceeEEEEE--CCEEEEEcccCCCCCccccCCeEEEEECCCCeEE
Q 001901 315 KHRDGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (998)
Q Consensus 315 ~~~~~~W~w~~~~g~~P~pR~~hsav~~--~~~L~V~GG~~~~~~~~~~~~dv~vyD~~t~~W~ 376 (998)
.... ........ ...-.++++. ++++++.|+.++ .+.+||..+..-.
T Consensus 194 ~~~~-~~~~~~~~-----~~~v~~~~~~~~~~~~l~~~s~d~---------~v~iwd~~~~~~~ 242 (393)
T 1erj_A 194 LRTG-QCSLTLSI-----EDGVTTVAVSPGDGKYIAAGSLDR---------AVRVWDSETGFLV 242 (393)
T ss_dssp TTTT-EEEEEEEC-----SSCEEEEEECSTTCCEEEEEETTS---------CEEEEETTTCCEE
T ss_pred CCCC-eeEEEEEc-----CCCcEEEEEECCCCCEEEEEcCCC---------cEEEEECCCCcEE
Confidence 3322 22221111 0111223333 567888887643 3888998887543
No 293
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=21.49 E-value=1.9e+02 Score=32.13 Aligned_cols=106 Identities=12% Similarity=0.019 Sum_probs=55.6
Q ss_pred ccCCcEEEEECCCCc------EEEecC----CCCCCCCccceEEEEeCCEEEEEe---CCCCCCCCcccEEEEEcCCCCC
Q 001901 147 GATADVHCYDVLTNK------WSRITP----FGEPPTPRAAHVATAVGTMVVIQG---GIGPAGLSAEDLHVLDLTQQRP 213 (998)
Q Consensus 147 ~~~~dv~~yD~~t~~------W~~l~~----~g~~P~pR~~hsa~~~~~~lyVfG---G~~~~~~~~~dv~~~Dl~t~t~ 213 (998)
.....++.+|..+.. |..... .+-.|......+...-++++||.- +.+......+.++++|+.+..
T Consensus 244 s~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~k- 322 (386)
T 3sjl_D 244 TYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE- 322 (386)
T ss_dssp BTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC-
T ss_pred eCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCe-
Confidence 345678889986543 431110 111122222223322356999963 322233345789999999863
Q ss_pred ceEEeeecCCCCCCCcccEEEEECCc--EEEEEcCCCCCCCcccEEEEECCCC
Q 001901 214 RWHRVVVQGPGPGPRYGHVMALVGQR--YLMAIGGNDGKRPLADVWALDTAAK 264 (998)
Q Consensus 214 ~W~~l~~~g~~P~~R~~hs~~~~~~~--~Lyv~GG~~g~~~lndv~~yD~~s~ 264 (998)
.+. .++.+..-+++.+-.++ .||+.-+. .+++.+||..+.
T Consensus 323 ---v~~---~i~vg~~~~~lavs~D~~~~ly~tn~~-----~~~VsViD~~t~ 364 (386)
T 3sjl_D 323 ---RLA---KFEMGHEIDSINVSQDEKPLLYALSTG-----DKTLYIHDAESG 364 (386)
T ss_dssp ---EEE---EEEEEEEECEEEECSSSSCEEEEEETT-----TTEEEEEETTTC
T ss_pred ---EEE---EEECCCCcceEEECCCCCeEEEEEcCC-----CCeEEEEECCCC
Confidence 222 22223333445444443 46764332 368999999988
No 294
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=20.23 E-value=7.4e+02 Score=25.71 Aligned_cols=150 Identities=13% Similarity=0.092 Sum_probs=0.0
Q ss_pred CCEEEEEeCCCCCCCCcccEEEEEcCCCCCceEEeeecCCCCCCCcccEEEEECCcEEEEEcCCCCCCCcccEEEEECCC
Q 001901 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (998)
Q Consensus 184 ~~~lyVfGG~~~~~~~~~dv~~~Dl~t~t~~W~~l~~~g~~P~~R~~hs~~~~~~~~Lyv~GG~~g~~~lndv~~yD~~s 263 (998)
++.+|+.+..+ ..+++||+.+. ..... ..+..-++++...++.+|+... ..+++||+.+
T Consensus 60 ~~~l~~~d~~~------~~i~~~d~~~~---~~~~~-----~~~~~v~~i~~~~dg~l~v~~~-------~gl~~~d~~~ 118 (326)
T 2ghs_A 60 SGTAWWFNILE------RELHELHLASG---RKTVH-----ALPFMGSALAKISDSKQLIASD-------DGLFLRDTAT 118 (326)
T ss_dssp TTEEEEEEGGG------TEEEEEETTTT---EEEEE-----ECSSCEEEEEEEETTEEEEEET-------TEEEEEETTT
T ss_pred CCEEEEEECCC------CEEEEEECCCC---cEEEE-----ECCCcceEEEEeCCCeEEEEEC-------CCEEEEECCC
Q ss_pred CCceEEEcccCCCCCCCccceEEEEEeCCEEEEEeccCCCCCCcccEEEEecCCCCeEEEEECCCCCCCCcceeEEEEE-
Q 001901 264 KPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV- 342 (998)
Q Consensus 264 ~~~~W~~v~~~~~~P~~r~~~~a~~~~~~~lyvfGG~~~~~~~~~dv~~~~~~~~~~W~w~~~~g~~P~pR~~hsav~~- 342 (998)
. ++..+..........+....++-.++++|+.............+|.++ +++..... .......+.++.
T Consensus 119 g--~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~---~g~~~~~~-----~~~~~~~~i~~s~ 188 (326)
T 2ghs_A 119 G--VLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA---KGKVTKLF-----ADISIPNSICFSP 188 (326)
T ss_dssp C--CEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE---TTEEEEEE-----EEESSEEEEEECT
T ss_pred C--cEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe---CCcEEEee-----CCCcccCCeEEcC
Q ss_pred -CCEEEEEcccCCCCCccccCCeEEEEECC--CC
Q 001901 343 -NARLHVSGGALGGGRMVEDSSSVAVLDTA--AG 373 (998)
Q Consensus 343 -~~~L~V~GG~~~~~~~~~~~~dv~vyD~~--t~ 373 (998)
+..||+.... .+.|++||.. +.
T Consensus 189 dg~~lyv~~~~---------~~~I~~~d~~~~~G 213 (326)
T 2ghs_A 189 DGTTGYFVDTK---------VNRLMRVPLDARTG 213 (326)
T ss_dssp TSCEEEEEETT---------TCEEEEEEBCTTTC
T ss_pred CCCEEEEEECC---------CCEEEEEEcccccC
Done!