Query 001902
Match_columns 998
No_of_seqs 676 out of 4588
Neff 8.1
Searched_HMMs 46136
Date Thu Mar 28 11:58:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001902.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001902hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0610 Putative serine/threon 100.0 3.5E-54 7.5E-59 461.2 26.5 336 639-974 50-415 (459)
2 KOG0605 NDR and related serine 100.0 4.1E-53 8.8E-58 467.0 25.8 309 661-973 137-467 (550)
3 KOG0598 Ribosomal protein S6 k 100.0 1.5E-52 3.3E-57 446.3 24.0 282 661-972 21-304 (357)
4 KOG0616 cAMP-dependent protein 100.0 6.1E-52 1.3E-56 426.1 22.9 276 662-971 41-319 (355)
5 KOG0592 3-phosphoinositide-dep 100.0 1.4E-51 3E-56 453.9 24.1 288 662-971 70-358 (604)
6 KOG0581 Mitogen-activated prot 100.0 2.1E-50 4.5E-55 429.9 24.0 263 660-959 74-343 (364)
7 KOG0575 Polo-like serine/threo 100.0 4.2E-50 9E-55 450.2 24.5 256 665-955 18-273 (592)
8 KOG0615 Serine/threonine prote 100.0 9.4E-51 2E-55 433.9 15.4 261 664-958 171-444 (475)
9 KOG0694 Serine/threonine prote 100.0 2.3E-48 5.1E-53 440.4 25.0 296 660-991 363-662 (694)
10 KOG0593 Predicted protein kina 100.0 3.1E-47 6.7E-52 391.6 16.9 261 664-958 1-291 (396)
11 KOG0595 Serine/threonine-prote 100.0 5.4E-46 1.2E-50 398.7 23.7 259 664-957 9-274 (429)
12 KOG0591 NIMA (never in mitosis 100.0 5.5E-47 1.2E-51 386.0 12.3 251 663-941 17-275 (375)
13 KOG0597 Serine-threonine prote 100.0 7.5E-46 1.6E-50 407.2 18.5 256 665-957 2-257 (808)
14 KOG0588 Serine/threonine prote 100.0 2.8E-45 6.1E-50 411.3 21.9 263 664-962 11-274 (786)
15 KOG0661 MAPK related serine/th 100.0 2E-45 4.3E-50 399.5 16.4 263 662-960 7-300 (538)
16 KOG0583 Serine/threonine prote 100.0 2.9E-44 6.3E-49 406.5 26.5 262 662-957 14-281 (370)
17 KOG0580 Serine/threonine prote 100.0 2.4E-45 5.2E-50 367.5 14.9 262 661-957 18-279 (281)
18 KOG0690 Serine/threonine prote 100.0 1.1E-44 2.3E-49 374.5 18.3 288 661-979 164-454 (516)
19 KOG0033 Ca2+/calmodulin-depend 100.0 9.9E-46 2.1E-50 369.6 10.0 261 662-957 8-273 (355)
20 KOG0600 Cdc2-related protein k 100.0 2.6E-44 5.6E-49 393.6 21.6 262 662-956 114-405 (560)
21 KOG0585 Ca2+/calmodulin-depend 100.0 2E-44 4.2E-49 390.8 20.4 266 662-956 94-377 (576)
22 cd05612 STKc_PRKX_like Catalyt 100.0 9.5E-44 2.1E-48 395.0 26.3 267 665-965 1-268 (291)
23 KOG0582 Ste20-like serine/thre 100.0 9.4E-44 2E-48 383.6 24.7 273 658-960 19-302 (516)
24 KOG0578 p21-activated serine/t 100.0 2E-44 4.3E-49 401.6 20.1 267 652-957 262-529 (550)
25 KOG0659 Cdk activating kinase 100.0 8.5E-44 1.8E-48 361.1 22.6 273 665-975 2-301 (318)
26 PTZ00263 protein kinase A cata 100.0 1.7E-43 3.7E-48 400.0 26.9 268 662-963 15-283 (329)
27 KOG0612 Rho-associated, coiled 100.0 7.7E-45 1.7E-49 427.7 16.3 290 661-980 71-367 (1317)
28 cd05571 STKc_PKB Catalytic dom 100.0 3.9E-43 8.4E-48 396.1 27.0 262 671-963 1-263 (323)
29 cd05628 STKc_NDR1 Catalytic do 100.0 7.2E-43 1.6E-47 400.4 29.5 294 665-965 1-307 (363)
30 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 5E-43 1.1E-47 397.0 27.8 271 665-971 1-277 (333)
31 PTZ00426 cAMP-dependent protei 100.0 4.6E-43 1E-47 397.9 27.1 269 661-963 26-296 (340)
32 KOG0198 MEKK and related serin 100.0 1.3E-43 2.8E-48 385.7 20.4 263 665-959 17-284 (313)
33 KOG0599 Phosphorylase kinase g 100.0 3.3E-44 7.1E-49 363.5 13.1 270 664-967 16-299 (411)
34 cd05599 STKc_NDR_like Catalyti 100.0 1E-42 2.2E-47 399.5 27.1 302 665-970 1-315 (364)
35 cd05631 STKc_GRK4 Catalytic do 100.0 1.1E-42 2.3E-47 385.4 26.2 272 666-965 1-275 (285)
36 cd05629 STKc_NDR_like_fungal C 100.0 8.5E-43 1.8E-47 402.0 25.2 300 665-971 1-325 (377)
37 KOG0663 Protein kinase PITSLRE 100.0 3.3E-43 7.3E-48 366.5 19.5 260 664-957 75-367 (419)
38 cd05627 STKc_NDR2 Catalytic do 100.0 2.4E-42 5.1E-47 395.7 26.6 297 665-965 1-307 (360)
39 cd05593 STKc_PKB_gamma Catalyt 100.0 3.5E-42 7.6E-47 389.1 27.6 262 671-963 1-263 (328)
40 cd05626 STKc_LATS2 Catalytic d 100.0 6E-42 1.3E-46 395.4 29.5 292 666-963 2-317 (381)
41 cd05585 STKc_YPK1_like Catalyt 100.0 5E-42 1.1E-46 385.2 27.7 259 673-963 1-259 (312)
42 cd05598 STKc_LATS Catalytic do 100.0 3.2E-42 6.8E-47 397.1 26.7 299 665-970 1-321 (376)
43 cd05595 STKc_PKB_beta Catalyti 100.0 5.5E-42 1.2E-46 386.7 27.8 262 671-963 1-263 (323)
44 cd05596 STKc_ROCK Catalytic do 100.0 4.1E-42 8.9E-47 394.8 26.7 269 661-962 39-315 (370)
45 cd05601 STKc_CRIK Catalytic do 100.0 2E-42 4.3E-47 391.5 23.7 274 665-970 1-282 (330)
46 cd05590 STKc_nPKC_eta Catalyti 100.0 5.5E-42 1.2E-46 386.2 27.1 262 671-963 1-265 (320)
47 cd05574 STKc_phototropin_like 100.0 1.9E-41 4.1E-46 381.0 31.0 312 665-976 1-314 (316)
48 cd05625 STKc_LATS1 Catalytic d 100.0 8E-42 1.7E-46 394.6 28.2 293 666-962 2-316 (382)
49 cd05573 STKc_ROCK_NDR_like Cat 100.0 4E-42 8.8E-47 392.1 24.7 300 665-970 1-304 (350)
50 cd05591 STKc_nPKC_epsilon Cata 100.0 1E-41 2.2E-46 384.3 27.6 265 671-966 1-269 (321)
51 cd05621 STKc_ROCK2 Catalytic d 100.0 5.6E-42 1.2E-46 393.4 25.9 268 662-962 40-315 (370)
52 cd05587 STKc_cPKC Catalytic do 100.0 9.9E-42 2.1E-46 384.8 27.5 268 666-964 1-270 (324)
53 KOG0201 Serine/threonine prote 100.0 1E-43 2.2E-48 383.7 9.6 258 665-958 13-270 (467)
54 cd05575 STKc_SGK Catalytic dom 100.0 1.3E-41 2.8E-46 383.7 27.0 262 671-963 1-263 (323)
55 cd05616 STKc_cPKC_beta Catalyt 100.0 1.5E-41 3.3E-46 383.2 27.5 268 666-964 1-270 (323)
56 cd05589 STKc_PKN Catalytic dom 100.0 1.8E-41 3.9E-46 382.8 27.7 264 667-962 1-268 (324)
57 KOG0660 Mitogen-activated prot 100.0 4.4E-42 9.5E-47 364.8 20.8 265 665-962 22-321 (359)
58 cd05594 STKc_PKB_alpha Catalyt 100.0 1.2E-41 2.5E-46 384.4 25.4 262 671-963 1-264 (325)
59 cd05588 STKc_aPKC Catalytic do 100.0 2.8E-41 6.1E-46 381.9 27.6 264 671-965 1-276 (329)
60 cd05615 STKc_cPKC_alpha Cataly 100.0 4.7E-41 1E-45 379.1 28.8 268 666-964 1-270 (323)
61 KOG0032 Ca2+/calmodulin-depend 100.0 2.4E-41 5.2E-46 382.4 26.2 259 664-957 34-299 (382)
62 KOG0611 Predicted serine/threo 100.0 2.4E-42 5.2E-47 365.7 16.6 255 664-955 52-307 (668)
63 cd05620 STKc_nPKC_delta Cataly 100.0 4.7E-41 1E-45 377.9 27.7 258 671-963 1-260 (316)
64 cd05604 STKc_SGK3 Catalytic do 100.0 3.1E-41 6.8E-46 380.9 26.3 263 671-964 1-264 (325)
65 cd05592 STKc_nPKC_theta_delta 100.0 4.8E-41 1E-45 377.8 27.7 261 671-965 1-262 (316)
66 cd05607 STKc_GRK7 Catalytic do 100.0 6.2E-41 1.3E-45 369.7 27.7 267 673-968 1-271 (277)
67 cd05619 STKc_nPKC_theta Cataly 100.0 6.8E-41 1.5E-45 376.6 28.1 260 671-965 1-262 (316)
68 cd05622 STKc_ROCK1 Catalytic d 100.0 4.9E-41 1.1E-45 385.9 27.4 276 661-970 39-325 (371)
69 KOG0192 Tyrosine kinase specif 100.0 3.8E-41 8.2E-46 377.6 25.7 259 660-948 36-300 (362)
70 cd05570 STKc_PKC Catalytic dom 100.0 6.9E-41 1.5E-45 376.9 27.7 262 671-963 1-264 (318)
71 cd05605 STKc_GRK4_like Catalyt 100.0 6.8E-41 1.5E-45 370.9 26.5 270 666-965 1-275 (285)
72 cd05608 STKc_GRK1 Catalytic do 100.0 9.3E-41 2E-45 368.8 27.0 263 673-964 1-270 (280)
73 cd05597 STKc_DMPK_like Catalyt 100.0 1.2E-40 2.7E-45 377.0 28.4 274 665-969 1-284 (331)
74 cd05618 STKc_aPKC_iota Catalyt 100.0 1.1E-40 2.3E-45 377.2 27.5 262 671-963 1-274 (329)
75 KOG0986 G protein-coupled rece 100.0 4.7E-42 1E-46 369.7 15.4 285 660-974 180-471 (591)
76 cd05602 STKc_SGK1 Catalytic do 100.0 1.1E-40 2.4E-45 376.5 27.4 262 671-963 1-263 (325)
77 cd05584 STKc_p70S6K Catalytic 100.0 1.2E-40 2.6E-45 375.9 27.5 263 670-963 1-268 (323)
78 cd05586 STKc_Sck1_like Catalyt 100.0 4.1E-41 8.9E-46 380.8 23.8 262 673-964 1-266 (330)
79 KOG0594 Protein kinase PCTAIRE 100.0 5.3E-41 1.2E-45 358.4 23.1 262 664-958 10-309 (323)
80 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.2E-40 2.7E-45 376.4 27.6 273 671-974 1-283 (327)
81 cd05603 STKc_SGK2 Catalytic do 100.0 1.3E-40 2.8E-45 375.2 27.1 262 671-963 1-263 (321)
82 cd05624 STKc_MRCK_beta Catalyt 100.0 8.9E-41 1.9E-45 378.2 25.5 278 665-971 1-286 (331)
83 KOG0696 Serine/threonine prote 100.0 5.8E-42 1.3E-46 363.5 14.3 284 659-973 343-630 (683)
84 KOG0589 Serine/threonine prote 100.0 1.5E-41 3.2E-46 377.9 18.2 262 664-958 3-265 (426)
85 cd05623 STKc_MRCK_alpha Cataly 100.0 1.5E-40 3.2E-45 376.6 26.3 276 665-971 1-286 (332)
86 KOG0579 Ste20-like serine/thre 100.0 4.4E-42 9.4E-47 379.6 13.3 260 665-959 32-297 (1187)
87 KOG0608 Warts/lats-like serine 100.0 1.9E-41 4.1E-46 375.5 18.2 300 662-971 626-948 (1034)
88 cd07848 STKc_CDKL5 Catalytic d 100.0 1.7E-40 3.6E-45 367.8 25.8 257 665-954 1-287 (287)
89 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2E-40 4.4E-45 367.7 25.6 256 664-954 4-288 (288)
90 cd05614 STKc_MSK2_N N-terminal 100.0 3.2E-40 7E-45 373.8 27.3 268 666-963 1-279 (332)
91 KOG4717 Serine/threonine prote 100.0 5E-41 1.1E-45 364.6 19.4 261 665-961 18-280 (864)
92 cd06649 PKc_MEK2 Catalytic dom 100.0 7.9E-40 1.7E-44 370.5 29.5 261 662-959 2-309 (331)
93 cd05582 STKc_RSK_N N-terminal 100.0 1.8E-40 3.8E-45 373.7 23.9 263 670-964 1-267 (318)
94 KOG0614 cGMP-dependent protein 100.0 5.6E-42 1.2E-46 372.5 10.9 280 661-970 416-698 (732)
95 cd07869 STKc_PFTAIRE1 Catalyti 100.0 3.8E-40 8.2E-45 368.3 26.1 261 664-959 4-296 (303)
96 KOG0596 Dual specificity; seri 100.0 9.5E-41 2.1E-45 367.7 20.6 261 661-956 357-632 (677)
97 KOG0574 STE20-like serine/thre 100.0 1.2E-42 2.5E-47 355.8 5.1 256 666-958 34-290 (502)
98 KOG0667 Dual-specificity tyros 100.0 1.4E-40 2.9E-45 378.2 22.3 254 666-958 187-509 (586)
99 KOG0577 Serine/threonine prote 100.0 3.1E-41 6.7E-46 371.5 15.2 254 666-956 27-283 (948)
100 cd05632 STKc_GRK5 Catalytic do 100.0 1.9E-39 4.1E-44 359.4 28.2 277 666-970 1-282 (285)
101 cd05630 STKc_GRK6 Catalytic do 100.0 1.7E-39 3.7E-44 359.7 26.9 277 666-971 1-283 (285)
102 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.3E-39 2.9E-44 369.3 25.8 263 666-960 1-299 (338)
103 cd05580 STKc_PKA Catalytic dom 100.0 5.1E-39 1.1E-43 356.8 29.4 265 665-963 1-266 (290)
104 PHA03212 serine/threonine kina 100.0 2.5E-39 5.5E-44 373.6 27.3 254 662-957 89-382 (391)
105 cd06650 PKc_MEK1 Catalytic dom 100.0 4.4E-39 9.6E-44 364.6 28.3 259 662-957 2-305 (333)
106 cd07862 STKc_CDK6 Catalytic do 100.0 3.3E-39 7.1E-44 358.0 26.2 256 665-954 1-290 (290)
107 PTZ00036 glycogen synthase kin 100.0 3.5E-39 7.6E-44 378.3 27.8 256 664-959 65-359 (440)
108 KOG0658 Glycogen synthase kina 100.0 2E-40 4.4E-45 352.7 15.4 255 666-960 25-315 (364)
109 PLN00034 mitogen-activated pro 100.0 7.2E-39 1.6E-43 366.0 28.3 257 661-957 70-334 (353)
110 cd05609 STKc_MAST Catalytic do 100.0 1.7E-38 3.7E-43 355.2 30.7 302 665-983 1-303 (305)
111 KOG0197 Tyrosine kinases [Sign 100.0 1.3E-39 2.9E-44 363.0 20.2 254 658-943 199-453 (468)
112 cd07876 STKc_JNK2 Catalytic do 100.0 1.2E-38 2.7E-43 364.9 27.1 255 664-956 20-320 (359)
113 KOG0695 Serine/threonine prote 100.0 2E-39 4.3E-44 336.1 17.8 293 658-985 243-546 (593)
114 cd07875 STKc_JNK1 Catalytic do 100.0 2.1E-38 4.6E-43 363.6 28.1 255 664-956 23-323 (364)
115 cd07853 STKc_NLK Catalytic dom 100.0 2.6E-38 5.7E-43 363.9 28.6 261 666-960 1-297 (372)
116 KOG0607 MAP kinase-interacting 100.0 3.2E-39 7E-44 333.8 18.5 265 667-960 79-370 (463)
117 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2.1E-38 4.6E-43 355.2 26.2 259 664-957 5-292 (309)
118 KOG0604 MAP kinase-activated p 100.0 1.7E-39 3.7E-44 333.8 15.5 254 664-957 60-328 (400)
119 cd07863 STKc_CDK4 Catalytic do 100.0 1.7E-38 3.7E-43 351.7 24.8 255 666-954 1-288 (288)
120 cd06625 STKc_MEKK3_like Cataly 100.0 4.9E-38 1.1E-42 342.9 27.6 260 665-954 2-263 (263)
121 cd07874 STKc_JNK3 Catalytic do 100.0 2.8E-38 6E-43 361.4 26.7 256 664-957 16-317 (355)
122 PTZ00283 serine/threonine prot 100.0 2E-38 4.4E-43 376.3 26.1 266 662-958 29-304 (496)
123 PTZ00267 NIMA-related protein 100.0 3E-38 6.5E-43 374.5 27.4 260 665-957 67-329 (478)
124 KOG0983 Mitogen-activated prot 100.0 3.9E-39 8.5E-44 327.1 16.5 258 664-957 91-355 (391)
125 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.5E-38 3.3E-43 361.8 23.4 256 664-958 14-305 (343)
126 cd05577 STKc_GRK Catalytic dom 100.0 4.9E-38 1.1E-42 346.4 26.6 263 673-963 1-266 (277)
127 PTZ00284 protein kinase; Provi 100.0 3.8E-38 8.2E-43 373.3 26.7 254 663-957 127-444 (467)
128 cd08227 PK_STRAD_alpha Pseudok 100.0 7.2E-38 1.6E-42 353.8 26.8 265 669-958 2-314 (327)
129 cd05102 PTKc_VEGFR3 Catalytic 100.0 4.2E-38 9.1E-43 357.4 24.9 257 661-944 3-327 (338)
130 cd06644 STKc_STK10_LOK Catalyt 100.0 1.2E-37 2.6E-42 346.0 28.0 264 664-962 11-280 (292)
131 cd05572 STKc_cGK_PKG Catalytic 100.0 1E-37 2.2E-42 340.6 26.7 258 673-960 1-261 (262)
132 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1E-37 2.2E-42 348.3 26.7 260 664-958 5-293 (301)
133 cd08223 STKc_Nek4 Catalytic do 100.0 2.2E-37 4.8E-42 336.6 28.6 256 666-954 1-257 (257)
134 cd08529 STKc_FA2-like Catalyti 100.0 2E-37 4.4E-42 336.5 27.9 256 666-954 1-256 (256)
135 cd06619 PKc_MKK5 Catalytic dom 100.0 2.1E-37 4.6E-42 341.8 27.2 253 665-958 1-260 (279)
136 cd06637 STKc_TNIK Catalytic do 100.0 1.7E-37 3.7E-42 340.6 26.3 255 665-954 6-272 (272)
137 cd06609 STKc_MST3_like Catalyt 100.0 2.3E-37 4.9E-42 340.3 26.9 259 665-959 1-259 (274)
138 PHA03207 serine/threonine kina 100.0 1.2E-37 2.6E-42 360.7 26.0 260 664-963 91-387 (392)
139 PF00069 Pkinase: Protein kina 100.0 4.2E-38 9.2E-43 342.5 20.5 254 667-954 1-260 (260)
140 cd07861 STKc_CDK1_euk Catalyti 100.0 2.3E-37 5E-42 342.0 26.5 256 666-954 1-285 (285)
141 cd06615 PKc_MEK Catalytic doma 100.0 3.4E-37 7.3E-42 345.3 28.1 256 665-957 1-293 (308)
142 cd05611 STKc_Rim15_like Cataly 100.0 2.4E-37 5.2E-42 337.2 26.1 256 671-960 2-260 (260)
143 cd05633 STKc_GRK3 Catalytic do 100.0 3.8E-37 8.2E-42 339.9 27.8 259 672-962 1-266 (279)
144 cd06611 STKc_SLK_like Catalyti 100.0 2.3E-37 5.1E-42 341.3 26.0 260 665-959 5-270 (280)
145 cd05579 STKc_MAST_like Catalyt 100.0 2.1E-37 4.6E-42 337.5 25.3 265 673-959 1-265 (265)
146 PTZ00266 NIMA-related protein 100.0 1.9E-37 4.2E-42 378.2 27.6 265 661-959 9-303 (1021)
147 PHA02988 hypothetical protein; 100.0 1.9E-37 4.2E-42 342.9 25.2 245 671-949 26-277 (283)
148 PHA03211 serine/threonine kina 100.0 2.6E-37 5.7E-42 361.5 27.1 254 663-956 167-460 (461)
149 cd06643 STKc_SLK Catalytic dom 100.0 5E-37 1.1E-41 339.2 27.8 256 667-957 7-268 (282)
150 cd06645 STKc_MAP4K3 Catalytic 100.0 3.4E-37 7.3E-42 337.4 25.4 254 664-953 8-267 (267)
151 cd05606 STKc_beta_ARK Catalyti 100.0 6.1E-37 1.3E-41 338.0 27.5 260 672-968 1-272 (278)
152 cd05061 PTKc_InsR Catalytic do 100.0 6.1E-37 1.3E-41 339.7 27.4 271 661-959 2-288 (288)
153 KOG0662 Cyclin-dependent kinas 100.0 6.7E-38 1.5E-42 299.6 16.3 259 665-957 2-289 (292)
154 KOG0193 Serine/threonine prote 100.0 2.1E-38 4.5E-43 353.7 14.8 262 659-951 386-653 (678)
155 cd06610 STKc_OSR1_SPAK Catalyt 100.0 6.1E-37 1.3E-41 334.7 26.1 261 665-954 1-267 (267)
156 PHA03209 serine/threonine kina 100.0 1.9E-37 4.1E-42 354.6 23.0 251 664-957 65-357 (357)
157 cd06636 STKc_MAP4K4_6 Catalyti 100.0 5E-37 1.1E-41 339.0 25.5 256 664-954 15-282 (282)
158 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.1E-36 2.3E-41 333.3 27.8 261 666-954 1-267 (267)
159 cd08221 STKc_Nek9 Catalytic do 100.0 1.2E-36 2.7E-41 330.7 28.0 256 666-954 1-256 (256)
160 cd07868 STKc_CDK8 Catalytic do 100.0 7.2E-37 1.6E-41 343.9 26.4 251 670-954 6-317 (317)
161 cd06646 STKc_MAP4K5 Catalytic 100.0 5.9E-37 1.3E-41 335.5 25.0 254 664-953 8-267 (267)
162 cd06656 STKc_PAK3 Catalytic do 100.0 5.7E-37 1.2E-41 341.7 25.1 256 665-957 19-275 (297)
163 cd06654 STKc_PAK1 Catalytic do 100.0 8.4E-37 1.8E-41 340.1 26.5 256 665-957 20-276 (296)
164 cd08218 STKc_Nek1 Catalytic do 100.0 1.1E-36 2.3E-41 331.2 26.5 256 666-954 1-256 (256)
165 cd06651 STKc_MEKK3 Catalytic d 100.0 1.3E-36 2.8E-41 332.8 27.4 259 666-955 3-265 (266)
166 cd06631 STKc_YSK4 Catalytic do 100.0 1.3E-36 2.8E-41 332.4 27.0 261 666-954 1-265 (265)
167 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.3E-36 2.7E-41 336.1 27.0 256 665-954 1-286 (286)
168 cd06655 STKc_PAK2 Catalytic do 100.0 1.4E-36 3E-41 338.4 27.4 256 665-957 19-275 (296)
169 cd05578 STKc_Yank1 Catalytic d 100.0 4.3E-37 9.2E-42 334.9 22.7 255 666-954 1-258 (258)
170 KOG4721 Serine/threonine prote 100.0 2.1E-38 4.6E-43 348.0 12.3 247 659-951 118-364 (904)
171 KOG4279 Serine/threonine prote 100.0 3.8E-38 8.1E-43 352.0 14.2 251 672-957 582-838 (1226)
172 cd07839 STKc_CDK5 Catalytic do 100.0 4.7E-37 1E-41 339.5 22.9 255 666-954 1-284 (284)
173 cd06605 PKc_MAPKK Catalytic do 100.0 9.2E-37 2E-41 333.3 24.2 257 665-957 1-263 (265)
174 cd06613 STKc_MAP4K3_like Catal 100.0 2.1E-36 4.5E-41 329.7 26.7 254 665-953 3-262 (262)
175 cd07832 STKc_CCRK Catalytic do 100.0 2.1E-36 4.7E-41 334.3 27.1 257 666-955 1-286 (286)
176 cd05610 STKc_MASTL Catalytic d 100.0 3.1E-36 6.7E-41 369.6 31.3 151 664-816 3-153 (669)
177 cd06612 STKc_MST1_2 Catalytic 100.0 2E-36 4.3E-41 328.7 26.2 253 665-954 3-256 (256)
178 cd08220 STKc_Nek8 Catalytic do 100.0 2.6E-36 5.7E-41 327.7 27.0 255 666-954 1-256 (256)
179 cd05064 PTKc_EphR_A10 Catalyti 100.0 2.3E-36 5.1E-41 331.0 26.5 252 662-943 2-257 (266)
180 cd06652 STKc_MEKK2 Catalytic d 100.0 3.2E-36 6.9E-41 329.5 27.5 260 665-955 2-265 (265)
181 cd07860 STKc_CDK2_3 Catalytic 100.0 1.3E-36 2.7E-41 336.1 24.5 256 666-954 1-284 (284)
182 cd06658 STKc_PAK5 Catalytic do 100.0 1.2E-36 2.7E-41 338.1 24.5 255 666-957 23-278 (292)
183 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.9E-36 4.1E-41 335.0 25.7 259 662-957 2-272 (284)
184 cd05048 PTKc_Ror Catalytic Dom 100.0 2.3E-36 5.1E-41 333.7 26.3 258 662-951 2-279 (283)
185 cd06630 STKc_MEKK1 Catalytic d 100.0 2E-36 4.3E-41 331.2 25.2 261 666-955 1-268 (268)
186 cd05106 PTKc_CSF-1R Catalytic 100.0 1.1E-36 2.4E-41 350.3 24.1 256 662-944 35-365 (374)
187 KOG1989 ARK protein kinase fam 100.0 2.3E-37 5E-42 362.6 18.3 262 662-948 34-308 (738)
188 cd08219 STKc_Nek3 Catalytic do 100.0 3.6E-36 7.7E-41 327.0 26.3 252 666-951 1-252 (255)
189 cd07845 STKc_CDK10 Catalytic d 100.0 3.2E-36 7E-41 337.4 26.8 263 663-959 5-298 (309)
190 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 2.5E-36 5.5E-41 334.1 25.4 258 665-958 1-269 (286)
191 cd05104 PTKc_Kit Catalytic dom 100.0 1.8E-36 3.8E-41 348.8 24.9 258 662-950 32-369 (375)
192 cd07850 STKc_JNK Catalytic dom 100.0 3.4E-36 7.3E-41 343.9 26.8 255 664-956 15-316 (353)
193 cd06608 STKc_myosinIII_like Ca 100.0 3E-36 6.4E-41 330.6 25.2 256 664-954 5-275 (275)
194 cd05096 PTKc_DDR1 Catalytic do 100.0 4.1E-36 9E-41 335.8 26.6 254 664-948 4-298 (304)
195 cd05052 PTKc_Abl Catalytic dom 100.0 6.6E-36 1.4E-40 326.7 27.2 251 662-943 3-254 (263)
196 cd05072 PTKc_Lyn Catalytic dom 100.0 4.6E-36 1E-40 327.3 25.6 250 661-942 2-252 (261)
197 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.2E-36 4.8E-41 334.4 23.3 256 665-954 1-286 (286)
198 cd06607 STKc_TAO Catalytic dom 100.0 5.9E-36 1.3E-40 335.0 26.9 256 665-957 15-273 (307)
199 cd06629 STKc_MAPKKK_Bck1_like 100.0 6.5E-36 1.4E-40 328.2 26.7 258 666-954 2-272 (272)
200 cd06640 STKc_MST4 Catalytic do 100.0 6.8E-36 1.5E-40 329.3 26.5 258 665-959 4-261 (277)
201 KOG2345 Serine/threonine prote 100.0 9.9E-38 2.1E-42 314.0 10.7 266 661-951 17-296 (302)
202 PLN00009 cyclin-dependent kina 100.0 6.3E-36 1.4E-40 332.4 26.4 261 665-958 2-291 (294)
203 cd06648 STKc_PAK_II Catalytic 100.0 9.3E-36 2E-40 329.8 27.6 255 666-957 20-275 (285)
204 cd06617 PKc_MKK3_6 Catalytic d 100.0 4.9E-36 1.1E-40 331.1 25.3 261 665-960 1-270 (283)
205 cd07841 STKc_CDK7 Catalytic do 100.0 5.1E-36 1.1E-40 333.7 25.6 259 666-957 1-288 (298)
206 cd07844 STKc_PCTAIRE_like Cata 100.0 5.6E-36 1.2E-40 332.2 25.7 256 664-954 4-291 (291)
207 cd06632 STKc_MEKK1_plant Catal 100.0 1.2E-35 2.6E-40 322.7 27.5 255 666-954 1-258 (258)
208 cd06623 PKc_MAPKK_plant_like C 100.0 7.4E-36 1.6E-40 325.6 25.9 258 665-958 1-263 (264)
209 KOG0586 Serine/threonine prote 100.0 5.9E-37 1.3E-41 344.7 17.5 262 659-957 50-312 (596)
210 PRK13184 pknD serine/threonine 100.0 6.4E-36 1.4E-40 363.8 27.9 270 665-943 2-281 (932)
211 cd06639 STKc_myosinIIIB Cataly 100.0 1E-35 2.2E-40 330.2 27.2 257 664-955 21-291 (291)
212 cd06642 STKc_STK25-YSK1 Cataly 100.0 2.5E-36 5.5E-41 332.6 22.0 258 665-959 4-261 (277)
213 cd06638 STKc_myosinIIIA Cataly 100.0 7.1E-36 1.5E-40 330.4 25.6 257 663-954 16-286 (286)
214 cd08225 STKc_Nek5 Catalytic do 100.0 8.3E-36 1.8E-40 324.0 25.6 256 666-954 1-257 (257)
215 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.5E-35 3.2E-40 328.4 28.1 260 665-959 1-274 (287)
216 KOG0671 LAMMER dual specificit 100.0 1.4E-37 3.1E-42 330.9 11.3 255 664-957 88-412 (415)
217 cd07837 STKc_CdkB_plant Cataly 100.0 8.9E-36 1.9E-40 331.2 26.4 258 665-955 1-295 (295)
218 KOG4236 Serine/threonine prote 100.0 1.6E-37 3.6E-42 338.0 11.9 258 671-964 570-833 (888)
219 cd05049 PTKc_Trk Catalytic dom 100.0 9.2E-36 2E-40 328.3 26.1 255 663-949 3-275 (280)
220 cd06626 STKc_MEKK4 Catalytic d 100.0 1.6E-35 3.5E-40 323.1 27.7 259 666-954 1-264 (264)
221 cd06917 STKc_NAK1_like Catalyt 100.0 7.8E-36 1.7E-40 328.5 25.4 257 666-958 2-262 (277)
222 PHA03210 serine/threonine kina 100.0 2.7E-36 5.9E-41 359.2 23.4 268 664-962 147-465 (501)
223 cd05054 PTKc_VEGFR Catalytic d 100.0 5.6E-36 1.2E-40 339.7 24.8 260 661-951 3-329 (337)
224 cd08228 STKc_Nek6 Catalytic do 100.0 1.2E-35 2.5E-40 325.1 26.5 255 665-950 2-260 (267)
225 cd05105 PTKc_PDGFR_alpha Catal 100.0 7.9E-36 1.7E-40 345.0 26.3 260 659-945 31-391 (400)
226 cd06659 STKc_PAK6 Catalytic do 100.0 7.1E-36 1.5E-40 332.8 25.1 256 665-957 21-277 (297)
227 cd05581 STKc_PDK1 Catalytic do 100.0 5.5E-36 1.2E-40 329.6 23.8 279 665-954 1-280 (280)
228 KOG0584 Serine/threonine prote 100.0 4.4E-37 9.5E-42 345.9 15.1 253 668-957 43-302 (632)
229 cd08217 STKc_Nek2 Catalytic do 100.0 1.7E-35 3.8E-40 322.4 27.4 256 666-954 1-265 (265)
230 cd06633 STKc_TAO3 Catalytic do 100.0 3E-35 6.6E-40 330.3 29.7 256 666-958 22-280 (313)
231 cd05148 PTKc_Srm_Brk Catalytic 100.0 1E-35 2.2E-40 324.4 24.9 249 665-945 6-255 (261)
232 cd07867 STKc_CDC2L6 Catalytic 100.0 1.1E-35 2.4E-40 334.1 25.8 250 671-954 7-317 (317)
233 PHA03390 pk1 serine/threonine- 100.0 1.2E-35 2.5E-40 325.9 25.2 248 665-956 14-267 (267)
234 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.8E-35 3.9E-40 321.8 26.4 250 664-950 3-253 (256)
235 cd07843 STKc_CDC2L1 Catalytic 100.0 8.7E-36 1.9E-40 331.2 24.3 257 664-954 4-293 (293)
236 cd08229 STKc_Nek7 Catalytic do 100.0 1.4E-35 3.1E-40 324.4 25.5 252 665-943 2-257 (267)
237 cd05093 PTKc_TrkB Catalytic do 100.0 2.2E-35 4.8E-40 327.2 27.3 253 662-943 2-271 (288)
238 cd06635 STKc_TAO1 Catalytic do 100.0 4.3E-35 9.3E-40 329.7 30.0 254 666-956 26-282 (317)
239 cd06647 STKc_PAK_I Catalytic d 100.0 6.8E-36 1.5E-40 332.3 23.2 257 664-957 18-275 (293)
240 cd06616 PKc_MKK4 Catalytic dom 100.0 7.5E-36 1.6E-40 330.7 23.4 262 664-960 3-276 (288)
241 cd07833 STKc_CDKL Catalytic do 100.0 1.3E-35 2.9E-40 328.2 25.1 257 665-954 1-288 (288)
242 cd07835 STKc_CDK1_like Catalyt 100.0 1.4E-35 3.1E-40 327.5 25.2 255 667-954 1-283 (283)
243 cd05108 PTKc_EGFR Catalytic do 100.0 1.4E-35 3.1E-40 333.4 25.7 255 662-946 4-263 (316)
244 cd08215 STKc_Nek Catalytic dom 100.0 2.8E-35 6.2E-40 319.1 27.1 256 666-954 1-258 (258)
245 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.6E-35 3.4E-40 337.0 26.2 283 664-995 14-332 (343)
246 cd07849 STKc_ERK1_2_like Catal 100.0 1.2E-35 2.6E-40 337.0 25.2 260 664-957 4-298 (336)
247 cd05583 STKc_MSK_N N-terminal 100.0 2.2E-35 4.7E-40 327.1 26.6 270 666-966 1-281 (288)
248 cd06614 STKc_PAK Catalytic dom 100.0 2E-35 4.2E-40 327.1 26.1 260 664-959 18-278 (286)
249 cd05062 PTKc_IGF-1R Catalytic 100.0 1.9E-35 4.2E-40 325.6 26.0 258 662-951 3-274 (277)
250 cd07842 STKc_CDK8_like Catalyt 100.0 1.5E-35 3.3E-40 332.6 25.4 260 666-954 1-316 (316)
251 cd07836 STKc_Pho85 Catalytic d 100.0 1.9E-35 4E-40 326.6 25.6 255 666-954 1-284 (284)
252 cd07870 STKc_PFTAIRE2 Catalyti 100.0 2.1E-35 4.6E-40 327.7 26.1 255 665-954 5-291 (291)
253 cd05068 PTKc_Frk_like Catalyti 100.0 2.9E-35 6.3E-40 321.1 26.7 250 662-943 3-253 (261)
254 cd06641 STKc_MST3 Catalytic do 100.0 2.5E-35 5.3E-40 324.9 26.0 255 666-957 5-259 (277)
255 cd05613 STKc_MSK1_N N-terminal 100.0 3.4E-35 7.4E-40 325.9 27.2 267 666-962 1-279 (290)
256 cd07831 STKc_MOK Catalytic dom 100.0 3.2E-35 6.9E-40 324.2 26.7 251 667-954 1-282 (282)
257 cd07865 STKc_CDK9 Catalytic do 100.0 2.4E-35 5.2E-40 329.9 26.0 261 664-954 11-310 (310)
258 cd05055 PTKc_PDGFR Catalytic d 100.0 3E-35 6.6E-40 328.6 26.7 256 662-944 32-294 (302)
259 cd07855 STKc_ERK5 Catalytic do 100.0 9.4E-36 2E-40 337.6 22.9 267 665-962 5-305 (334)
260 cd05090 PTKc_Ror1 Catalytic do 100.0 2.9E-35 6.4E-40 325.2 26.3 257 663-951 3-279 (283)
261 cd06653 STKc_MEKK3_like_1 Cata 100.0 5.4E-35 1.2E-39 319.7 27.9 259 665-954 2-264 (264)
262 cd05032 PTKc_InsR_like Catalyt 100.0 2.7E-35 5.8E-40 324.1 25.5 258 661-950 2-273 (277)
263 cd05071 PTKc_Src Catalytic dom 100.0 3.7E-35 8.1E-40 320.7 26.4 249 662-943 3-252 (262)
264 cd08226 PK_STRAD_beta Pseudoki 100.0 1.7E-35 3.6E-40 334.7 24.4 262 671-957 4-314 (328)
265 cd06624 STKc_ASK Catalytic dom 100.0 4.8E-35 1E-39 320.7 27.3 255 665-954 8-268 (268)
266 cd05123 STKc_AGC Catalytic dom 100.0 3.7E-35 7.9E-40 317.6 25.9 250 673-954 1-250 (250)
267 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.6E-35 3.4E-40 336.2 24.0 261 665-960 5-300 (337)
268 cd05088 PTKc_Tie2 Catalytic do 100.0 2.1E-35 4.6E-40 330.0 24.7 255 662-951 4-276 (303)
269 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 5.1E-35 1.1E-39 319.7 27.1 252 665-943 2-257 (267)
270 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 4.3E-35 9.3E-40 319.6 26.2 248 662-942 3-251 (260)
271 cd05113 PTKc_Btk_Bmx Catalytic 100.0 3.4E-35 7.5E-40 319.9 25.3 251 664-951 3-254 (256)
272 cd08216 PK_STRAD Pseudokinase 100.0 3.1E-35 6.8E-40 330.1 25.5 257 677-958 12-302 (314)
273 cd05084 PTKc_Fes Catalytic dom 100.0 6.1E-35 1.3E-39 316.7 26.8 246 671-949 1-247 (252)
274 cd05036 PTKc_ALK_LTK Catalytic 100.0 5.1E-35 1.1E-39 322.3 26.5 257 663-951 4-274 (277)
275 cd06657 STKc_PAK4 Catalytic do 100.0 5.1E-35 1.1E-39 325.1 26.4 254 667-957 22-276 (292)
276 cd05067 PTKc_Lck_Blk Catalytic 100.0 4.6E-35 9.9E-40 319.4 25.4 252 661-949 2-254 (260)
277 cd05033 PTKc_EphR Catalytic do 100.0 6.4E-35 1.4E-39 319.3 26.6 255 664-951 3-261 (266)
278 cd07834 STKc_MAPK Catalytic do 100.0 2.2E-35 4.7E-40 333.8 23.5 262 666-959 1-297 (330)
279 KOG0666 Cyclin C-dependent kin 100.0 2E-36 4.4E-41 312.3 13.5 264 664-957 23-343 (438)
280 cd05091 PTKc_Ror2 Catalytic do 100.0 4.5E-35 9.7E-40 323.6 25.1 257 662-950 2-278 (283)
281 cd06634 STKc_TAO2 Catalytic do 100.0 6.6E-35 1.4E-39 326.8 26.7 256 665-957 15-273 (308)
282 KOG0194 Protein tyrosine kinas 100.0 7.8E-36 1.7E-40 338.4 19.3 260 659-947 151-416 (474)
283 cd05059 PTKc_Tec_like Catalyti 100.0 5.3E-35 1.2E-39 318.2 25.2 250 664-950 3-253 (256)
284 cd05082 PTKc_Csk Catalytic dom 100.0 6E-35 1.3E-39 317.7 25.4 247 661-949 2-250 (256)
285 cd05051 PTKc_DDR Catalytic dom 100.0 6.3E-35 1.4E-39 324.5 26.1 256 663-949 3-291 (296)
286 KOG4645 MAPKKK (MAP kinase kin 100.0 2.6E-37 5.7E-42 368.6 7.3 259 666-956 1236-1499(1509)
287 cd06606 STKc_MAPKKK Catalytic 100.0 9.9E-35 2.1E-39 314.8 26.9 257 666-954 1-260 (260)
288 cd05122 PKc_STE Catalytic doma 100.0 1.3E-34 2.7E-39 312.6 27.4 252 666-953 1-253 (253)
289 cd05053 PTKc_FGFR Catalytic do 100.0 5.1E-35 1.1E-39 324.9 24.9 261 659-951 6-287 (293)
290 cd05116 PTKc_Syk Catalytic dom 100.0 1.2E-34 2.6E-39 315.6 27.2 249 672-949 2-253 (257)
291 cd07879 STKc_p38delta_MAPK13 C 100.0 3.3E-35 7.2E-40 334.2 23.5 257 665-961 15-307 (342)
292 cd07854 STKc_MAPK4_6 Catalytic 100.0 6.8E-35 1.5E-39 331.7 26.0 259 664-957 4-306 (342)
293 cd05094 PTKc_TrkC Catalytic do 100.0 8.6E-35 1.9E-39 323.0 26.2 255 663-946 3-277 (291)
294 cd05092 PTKc_TrkA Catalytic do 100.0 1.1E-34 2.3E-39 320.4 26.4 253 663-944 3-274 (280)
295 cd05066 PTKc_EphR_A Catalytic 100.0 9.7E-35 2.1E-39 318.2 25.9 253 664-944 3-259 (267)
296 cd00192 PTKc Catalytic domain 100.0 1.2E-34 2.6E-39 315.0 26.4 249 671-951 1-260 (262)
297 cd07838 STKc_CDK4_6_like Catal 100.0 1E-34 2.2E-39 320.9 25.9 254 667-954 1-287 (287)
298 cd05069 PTKc_Yes Catalytic dom 100.0 1.3E-34 2.9E-39 315.8 26.2 251 662-949 3-254 (260)
299 cd07877 STKc_p38alpha_MAPK14 C 100.0 7.2E-35 1.6E-39 331.9 25.1 255 664-957 16-306 (345)
300 cd05035 PTKc_Axl_like Catalyti 100.0 1.3E-34 2.8E-39 317.6 26.1 253 667-950 1-267 (273)
301 cd08530 STKc_CNK2-like Catalyt 100.0 1.4E-34 3.1E-39 313.9 26.0 254 666-954 1-256 (256)
302 cd05109 PTKc_HER2 Catalytic do 100.0 1.7E-34 3.7E-39 318.5 27.0 254 662-949 4-262 (279)
303 cd05039 PTKc_Csk_like Catalyti 100.0 1.9E-34 4.1E-39 313.6 27.0 245 662-943 3-248 (256)
304 cd05040 PTKc_Ack_like Catalyti 100.0 2E-34 4.4E-39 313.5 27.2 248 671-949 1-252 (257)
305 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.2E-34 2.6E-39 335.0 26.8 259 660-945 32-393 (401)
306 cd05075 PTKc_Axl Catalytic dom 100.0 1.8E-34 3.8E-39 316.7 26.9 253 667-950 1-266 (272)
307 cd06627 STKc_Cdc7_like Catalyt 100.0 2.5E-34 5.4E-39 311.4 27.7 254 666-954 1-254 (254)
308 cd05034 PTKc_Src_like Catalyti 100.0 1.8E-34 3.9E-39 314.6 26.5 252 662-949 3-255 (261)
309 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.2E-34 2.7E-39 324.4 25.7 257 661-945 14-293 (307)
310 KOG1151 Tousled-like protein k 100.0 5E-36 1.1E-40 320.6 13.5 267 664-956 462-746 (775)
311 cd05089 PTKc_Tie1 Catalytic do 100.0 1.8E-34 4E-39 321.4 26.7 249 665-944 2-268 (297)
312 cd05097 PTKc_DDR_like Catalyti 100.0 1.4E-34 2.9E-39 322.1 25.4 254 664-944 4-289 (295)
313 cd07840 STKc_CDK9_like Catalyt 100.0 1.4E-34 3.1E-39 319.5 25.3 255 667-954 1-287 (287)
314 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.2E-34 2.7E-39 329.6 25.4 259 662-951 4-335 (343)
315 PF07714 Pkinase_Tyr: Protein 100.0 6E-35 1.3E-39 318.7 21.8 250 668-949 2-256 (259)
316 cd05065 PTKc_EphR_B Catalytic 100.0 2E-34 4.3E-39 316.0 26.0 257 664-950 3-263 (269)
317 cd07851 STKc_p38 Catalytic dom 100.0 8.6E-35 1.9E-39 331.0 23.7 255 664-957 14-304 (343)
318 cd05060 PTKc_Syk_like Catalyti 100.0 2.8E-34 6.1E-39 312.6 26.7 248 671-948 1-252 (257)
319 cd05111 PTK_HER3 Pseudokinase 100.0 2.9E-34 6.2E-39 316.8 27.1 252 662-943 4-260 (279)
320 cd05050 PTKc_Musk Catalytic do 100.0 2.4E-34 5.2E-39 318.8 26.4 254 663-944 3-282 (288)
321 PTZ00024 cyclin-dependent prot 100.0 1.9E-34 4.2E-39 326.9 26.2 273 665-957 8-319 (335)
322 cd05046 PTK_CCK4 Pseudokinase 100.0 1.9E-34 4.1E-39 317.1 25.2 256 664-951 4-272 (275)
323 cd05101 PTKc_FGFR2 Catalytic d 100.0 2.7E-34 5.8E-39 321.1 26.8 257 661-945 11-290 (304)
324 cd07864 STKc_CDK12 Catalytic d 100.0 1.6E-34 3.4E-39 322.3 24.9 259 663-954 5-302 (302)
325 cd07866 STKc_BUR1 Catalytic do 100.0 1.5E-34 3.1E-39 323.7 24.5 268 664-954 7-311 (311)
326 cd05118 STKc_CMGC Catalytic do 100.0 1.2E-34 2.6E-39 319.6 23.5 254 667-954 1-283 (283)
327 cd05063 PTKc_EphR_A2 Catalytic 100.0 3.2E-34 7E-39 314.0 26.6 254 663-944 3-260 (268)
328 cd05073 PTKc_Hck Catalytic dom 100.0 3.6E-34 7.8E-39 312.4 26.5 250 661-943 2-252 (260)
329 cd07852 STKc_MAPK15 Catalytic 100.0 2E-34 4.3E-39 327.1 25.1 265 664-959 6-303 (337)
330 cd05095 PTKc_DDR2 Catalytic do 100.0 3.1E-34 6.7E-39 319.4 25.9 256 664-946 4-292 (296)
331 cd05045 PTKc_RET Catalytic dom 100.0 4.5E-34 9.8E-39 317.0 27.1 251 666-944 1-279 (290)
332 cd08222 STKc_Nek11 Catalytic d 100.0 1.7E-34 3.6E-39 314.8 23.2 256 666-954 1-260 (260)
333 cd05099 PTKc_FGFR4 Catalytic d 100.0 4.4E-34 9.6E-39 321.0 27.3 255 661-943 8-285 (314)
334 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 3.1E-34 6.8E-39 324.2 26.2 255 664-957 9-294 (328)
335 KOG1026 Nerve growth factor re 100.0 3.1E-35 6.7E-40 342.8 18.0 256 661-944 482-755 (774)
336 cd07857 STKc_MPK1 Catalytic do 100.0 4.7E-34 1E-38 323.4 27.1 261 666-957 1-298 (332)
337 KOG1187 Serine/threonine prote 100.0 1E-34 2.3E-39 328.0 21.6 253 664-948 74-349 (361)
338 cd06618 PKc_MKK7 Catalytic dom 100.0 3.7E-34 8.1E-39 318.7 25.5 261 661-957 11-279 (296)
339 KOG1035 eIF-2alpha kinase GCN2 100.0 3.8E-35 8.3E-40 348.9 17.7 273 663-955 477-875 (1351)
340 cd05100 PTKc_FGFR3 Catalytic d 100.0 5.4E-34 1.2E-38 323.2 26.3 262 659-948 6-290 (334)
341 cd05115 PTKc_Zap-70 Catalytic 100.0 1.1E-33 2.3E-38 308.4 27.5 246 672-946 2-250 (257)
342 cd05083 PTKc_Chk Catalytic dom 100.0 4.8E-34 1E-38 310.2 24.5 242 663-943 4-246 (254)
343 cd07830 STKc_MAK_like Catalyti 100.0 4.5E-34 9.8E-39 315.4 24.5 253 667-954 1-283 (283)
344 smart00219 TyrKc Tyrosine kina 100.0 9.5E-34 2.1E-38 307.6 26.7 251 667-950 1-256 (258)
345 cd07829 STKc_CDK_like Catalyti 100.0 4.3E-34 9.3E-39 315.1 24.2 254 667-954 1-282 (282)
346 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1E-33 2.2E-38 313.0 27.1 255 664-950 3-278 (284)
347 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 5.8E-34 1.2E-38 315.1 25.1 254 666-950 5-278 (284)
348 cd05112 PTKc_Itk Catalytic dom 100.0 8.5E-34 1.9E-38 308.3 25.9 250 664-950 3-253 (256)
349 cd05057 PTKc_EGFR_like Catalyt 100.0 1.2E-33 2.6E-38 311.6 27.5 254 663-946 5-263 (279)
350 cd05085 PTKc_Fer Catalytic dom 100.0 1.9E-33 4.1E-38 304.5 28.1 244 671-945 1-245 (250)
351 KOG1006 Mitogen-activated prot 100.0 5.2E-36 1.1E-40 303.6 7.1 262 663-959 62-335 (361)
352 KOG0603 Ribosomal protein S6 k 100.0 1.1E-34 2.5E-39 328.1 18.4 244 663-954 320-566 (612)
353 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 9E-34 2E-38 313.3 25.4 250 666-944 4-274 (283)
354 cd05041 PTKc_Fes_like Catalyti 100.0 1.3E-33 2.9E-38 305.9 26.2 246 671-950 1-247 (251)
355 cd05047 PTKc_Tie Catalytic dom 100.0 1.6E-33 3.4E-38 309.3 26.8 244 671-945 1-262 (270)
356 cd05043 PTK_Ryk Pseudokinase d 100.0 1.5E-33 3.3E-38 310.9 26.4 256 662-945 3-270 (280)
357 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 4.9E-34 1.1E-38 311.1 22.1 238 671-950 1-255 (258)
358 cd05576 STKc_RPK118_like Catal 100.0 4E-34 8.6E-39 307.9 21.0 233 676-954 4-237 (237)
359 cd05056 PTKc_FAK Catalytic dom 100.0 1.4E-33 3.1E-38 309.4 25.7 253 663-950 4-260 (270)
360 cd08528 STKc_Nek10 Catalytic d 100.0 2.6E-33 5.6E-38 307.1 26.4 252 666-945 1-264 (269)
361 cd05110 PTKc_HER4 Catalytic do 100.0 2.5E-33 5.4E-38 313.3 26.7 256 662-947 4-264 (303)
362 KOG0587 Traf2- and Nck-interac 100.0 3.5E-34 7.5E-39 331.4 19.6 259 664-957 18-288 (953)
363 cd05044 PTKc_c-ros Catalytic d 100.0 1.4E-33 3.1E-38 308.9 23.4 245 671-943 1-262 (269)
364 cd05042 PTKc_Aatyk Catalytic d 100.0 4.2E-33 9.1E-38 305.5 26.6 245 671-943 1-262 (269)
365 KOG1095 Protein tyrosine kinas 100.0 6.1E-34 1.3E-38 343.5 21.6 257 664-948 691-958 (1025)
366 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 3.1E-33 6.8E-38 305.7 25.2 239 671-951 1-260 (262)
367 KOG0668 Casein kinase II, alph 100.0 1.6E-34 3.6E-39 286.6 13.4 255 663-960 36-331 (338)
368 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 2.6E-33 5.6E-38 309.1 24.5 256 665-947 4-279 (284)
369 cd05058 PTKc_Met_Ron Catalytic 100.0 5.8E-33 1.3E-37 302.9 26.9 249 671-950 1-254 (262)
370 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 5E-33 1.1E-37 305.0 26.0 245 671-943 1-262 (269)
371 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 3.8E-33 8.3E-38 307.1 24.7 238 672-951 2-272 (274)
372 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 5.9E-33 1.3E-37 302.0 24.6 236 671-950 1-256 (259)
373 cd05074 PTKc_Tyro3 Catalytic d 100.0 7.9E-33 1.7E-37 303.8 25.7 253 667-950 1-267 (273)
374 KOG0669 Cyclin T-dependent kin 100.0 5.4E-35 1.2E-39 293.7 6.9 265 662-956 14-320 (376)
375 PHA02882 putative serine/threo 100.0 2.3E-32 4.9E-37 304.2 26.0 259 662-950 9-291 (294)
376 cd05086 PTKc_Aatyk2 Catalytic 100.0 3.3E-32 7.2E-37 298.5 26.5 247 671-949 1-263 (268)
377 KOG1290 Serine/threonine prote 100.0 4.8E-33 1E-37 303.2 19.3 142 655-801 68-222 (590)
378 KOG0199 ACK and related non-re 100.0 3E-33 6.6E-38 314.1 16.4 257 664-948 109-369 (1039)
379 PLN03225 Serine/threonine-prot 100.0 1.4E-32 3.1E-37 329.2 22.5 263 662-963 129-462 (566)
380 KOG4250 TANK binding protein k 100.0 4.6E-33 1E-37 316.9 16.5 244 666-939 14-296 (732)
381 KOG0670 U4/U6-associated splic 100.0 8.9E-34 1.9E-38 309.4 9.4 257 662-956 429-751 (752)
382 KOG0665 Jun-N-terminal kinase 100.0 3.6E-33 7.7E-38 290.8 13.4 253 664-955 16-314 (369)
383 KOG4278 Protein tyrosine kinas 100.0 1.2E-32 2.6E-37 304.6 17.9 254 659-943 261-515 (1157)
384 KOG4257 Focal adhesion tyrosin 100.0 1.2E-32 2.6E-37 305.8 17.3 249 665-944 389-642 (974)
385 KOG0196 Tyrosine kinase, EPH ( 100.0 7E-33 1.5E-37 315.7 12.6 267 658-952 622-895 (996)
386 KOG1094 Discoidin domain recep 100.0 3.8E-32 8.2E-37 300.6 17.2 255 662-944 535-797 (807)
387 smart00220 S_TKc Serine/Threon 100.0 4.1E-31 8.9E-36 283.0 24.8 242 677-954 1-244 (244)
388 PLN03224 probable serine/threo 100.0 2.9E-31 6.2E-36 310.2 25.5 266 661-956 141-505 (507)
389 KOG0984 Mitogen-activated prot 100.0 3.3E-32 7.2E-37 266.8 13.8 223 660-913 41-272 (282)
390 KOG0664 Nemo-like MAPK-related 100.0 3.1E-33 6.7E-38 283.5 6.3 262 665-960 53-352 (449)
391 KOG0576 Mitogen-activated prot 100.0 3.5E-32 7.5E-37 305.6 8.1 285 664-984 14-309 (829)
392 PRK13560 hypothetical protein; 100.0 5.1E-30 1.1E-34 324.9 27.9 406 167-618 182-618 (807)
393 KOG1167 Serine/threonine prote 100.0 5.3E-31 1.1E-35 284.9 13.7 291 654-959 26-389 (418)
394 KOG1027 Serine/threonine prote 100.0 2E-31 4.3E-36 307.3 11.0 251 667-956 511-772 (903)
395 KOG1025 Epidermal growth facto 100.0 1.2E-29 2.7E-34 289.7 15.0 253 666-948 697-954 (1177)
396 KOG1152 Signal transduction se 100.0 6.1E-30 1.3E-34 283.1 11.1 202 664-896 560-771 (772)
397 PLN00113 leucine-rich repeat r 100.0 4.1E-29 8.9E-34 322.4 19.6 238 666-947 691-947 (968)
398 KOG0200 Fibroblast/platelet-de 100.0 2.1E-28 4.7E-33 296.0 23.6 263 660-951 291-579 (609)
399 KOG3653 Transforming growth fa 100.0 3.2E-28 6.9E-33 265.4 18.0 244 663-942 208-494 (534)
400 KOG2052 Activin A type IB rece 100.0 1E-27 2.2E-32 259.6 18.5 243 665-941 211-493 (513)
401 PRK09776 putative diguanylate 99.9 1.3E-27 2.8E-32 312.8 18.6 372 176-587 270-656 (1092)
402 cd00180 PKc Catalytic domain o 99.9 2.9E-26 6.2E-31 239.0 23.6 213 673-952 1-215 (215)
403 TIGR02040 PpsR-CrtJ transcript 99.9 6.2E-27 1.4E-31 275.6 17.9 357 195-588 2-367 (442)
404 smart00221 STYKc Protein kinas 99.9 7.9E-26 1.7E-30 239.7 22.6 215 667-910 1-218 (225)
405 KOG1345 Serine/threonine kinas 99.9 3.4E-27 7.3E-32 240.3 10.0 253 664-954 23-290 (378)
406 PLN00181 protein SPA1-RELATED; 99.9 3.6E-26 7.8E-31 287.5 13.7 227 722-957 29-271 (793)
407 KOG0603 Ribosomal protein S6 k 99.9 2.3E-26 5E-31 260.9 5.5 261 672-974 1-266 (612)
408 PRK13560 hypothetical protein; 99.9 1.5E-24 3.3E-29 274.9 21.2 373 176-587 54-467 (807)
409 KOG1024 Receptor-like protein 99.9 2.4E-24 5.2E-29 229.1 17.9 255 662-944 281-548 (563)
410 smart00750 KIND kinase non-cat 99.9 4.3E-24 9.4E-29 218.6 13.3 161 750-955 1-169 (176)
411 KOG1163 Casein kinase (serine/ 99.9 1.1E-23 2.4E-28 211.5 14.9 275 661-963 11-302 (341)
412 KOG0606 Microtubule-associated 99.9 2.8E-24 6.1E-29 254.1 11.5 242 665-962 83-326 (1205)
413 KOG1165 Casein kinase (serine/ 99.9 3.3E-23 7.1E-28 216.9 16.1 223 659-908 22-253 (449)
414 KOG0590 Checkpoint kinase and 99.9 3.5E-24 7.7E-29 256.0 6.9 261 668-958 321-592 (601)
415 KOG1164 Casein kinase (serine/ 99.9 5.1E-22 1.1E-26 223.6 23.5 253 666-942 19-288 (322)
416 COG0515 SPS1 Serine/threonine 99.9 2.3E-21 5.1E-26 215.6 27.1 263 667-957 2-281 (384)
417 PRK09188 serine/threonine prot 99.9 1.1E-22 2.3E-27 228.7 16.1 178 660-868 13-194 (365)
418 PRK11359 cyclic-di-GMP phospho 99.8 1.2E-19 2.5E-24 230.3 25.5 236 186-587 9-253 (799)
419 PRK10359 lipopolysaccharide co 99.8 7.7E-21 1.7E-25 199.0 11.6 176 661-888 27-216 (232)
420 cd05147 RIO1_euk RIO kinase fa 99.8 2.1E-20 4.6E-25 193.4 12.8 141 670-816 2-166 (190)
421 TIGR02938 nifL_nitrog nitrogen 99.8 2.7E-20 5.9E-25 221.8 15.3 238 188-589 3-255 (494)
422 PF14531 Kinase-like: Kinase-l 99.8 2E-20 4.3E-25 201.7 11.3 236 666-938 13-288 (288)
423 KOG1240 Protein kinase contain 99.8 2.4E-21 5.2E-26 229.2 3.6 273 666-969 24-316 (1431)
424 KOG0195 Integrin-linked kinase 99.8 1.9E-20 4.1E-25 190.8 9.2 247 661-944 186-439 (448)
425 cd05145 RIO1_like RIO kinase f 99.8 4.1E-19 8.8E-24 184.4 15.6 141 670-817 2-167 (190)
426 PRK12274 serine/threonine prot 99.8 2.5E-18 5.4E-23 176.3 16.1 203 667-898 4-211 (218)
427 KOG4158 BRPK/PTEN-induced prot 99.8 4.6E-19 9.9E-24 189.6 9.9 208 723-957 274-519 (598)
428 KOG1166 Mitotic checkpoint ser 99.8 1.9E-18 4.1E-23 210.1 12.2 197 661-891 694-900 (974)
429 PRK10345 hypothetical protein; 99.8 1E-17 2.2E-22 175.1 15.3 135 669-814 6-156 (210)
430 smart00090 RIO RIO-like kinase 99.7 3.3E-17 7.1E-22 175.5 13.6 144 666-816 29-197 (237)
431 KOG1033 eIF-2alpha kinase PEK/ 99.7 4E-18 8.7E-23 190.8 5.9 185 738-954 329-515 (516)
432 PRK14879 serine/threonine prot 99.7 2.6E-16 5.6E-21 166.2 15.4 138 670-816 1-143 (211)
433 TIGR03724 arch_bud32 Kae1-asso 99.7 4.3E-16 9.3E-21 162.9 15.0 133 672-816 1-138 (199)
434 KOG0606 Microtubule-associated 99.7 3E-17 6.5E-22 195.1 5.2 297 663-962 802-1103(1205)
435 cd05144 RIO2_C RIO kinase fami 99.6 8E-16 1.7E-20 160.9 13.0 138 667-817 17-175 (198)
436 PF13426 PAS_9: PAS domain; PD 99.6 3.5E-15 7.5E-20 137.6 14.1 104 199-305 1-104 (104)
437 KOG0590 Checkpoint kinase and 99.6 3.2E-17 6.9E-22 196.4 -0.9 263 665-956 20-291 (601)
438 PRK09605 bifunctional UGMP fam 99.6 2.6E-15 5.6E-20 180.7 14.9 138 666-816 334-476 (535)
439 cd05119 RIO RIO kinase family, 99.6 5.1E-15 1.1E-19 153.1 12.5 138 670-817 2-164 (187)
440 KOG1023 Natriuretic peptide re 99.6 5.9E-15 1.3E-19 169.1 12.4 199 719-943 1-216 (484)
441 PRK09776 putative diguanylate 99.6 2.2E-15 4.7E-20 197.8 9.5 268 167-470 388-663 (1092)
442 PF13426 PAS_9: PAS domain; PD 99.6 1.8E-14 3.9E-19 132.8 11.9 100 482-584 1-104 (104)
443 PRK01723 3-deoxy-D-manno-octul 99.6 2.7E-14 5.9E-19 153.3 14.8 137 671-816 37-191 (239)
444 cd05120 APH_ChoK_like Aminogly 99.5 5.9E-14 1.3E-18 138.6 12.9 132 669-816 2-138 (155)
445 PF08448 PAS_4: PAS fold; Int 99.5 1.6E-13 3.4E-18 128.0 12.5 110 195-308 1-110 (110)
446 PF00989 PAS: PAS fold; Inter 99.5 1.9E-13 4E-18 128.2 12.3 112 189-303 1-113 (113)
447 TIGR01982 UbiB 2-polyprenylphe 99.4 5.5E-13 1.2E-17 155.4 11.5 188 623-818 76-308 (437)
448 PRK13557 histidine kinase; Pro 99.4 2.7E-12 5.8E-17 155.2 16.8 134 182-315 23-156 (540)
449 KOG0601 Cyclin-dependent kinas 99.4 2.2E-13 4.8E-18 156.1 6.7 262 663-957 112-385 (524)
450 PRK11091 aerobic respiration c 99.4 8.8E-13 1.9E-17 166.8 12.8 142 171-315 137-278 (779)
451 PF00989 PAS: PAS fold; Inter 99.4 1.6E-12 3.6E-17 121.7 11.5 106 474-582 3-113 (113)
452 PRK04750 ubiB putative ubiquin 99.4 1.9E-13 4.1E-18 160.8 5.9 187 624-818 79-315 (537)
453 PRK13559 hypothetical protein; 99.4 7E-12 1.5E-16 143.8 17.9 128 186-313 40-167 (361)
454 PF08448 PAS_4: PAS fold; Int 99.4 1.6E-12 3.5E-17 121.1 10.0 106 478-587 1-110 (110)
455 TIGR02040 PpsR-CrtJ transcript 99.4 2E-12 4.4E-17 152.5 11.5 214 351-587 11-245 (442)
456 PRK13559 hypothetical protein; 99.3 1.5E-11 3.2E-16 141.1 17.0 114 474-587 45-162 (361)
457 PRK11091 aerobic respiration c 99.3 8.4E-12 1.8E-16 157.9 13.7 155 455-618 137-296 (779)
458 PRK13557 histidine kinase; Pro 99.3 1E-11 2.3E-16 150.1 13.3 115 474-588 32-150 (540)
459 KOG1266 Protein kinase [Signal 99.3 4.1E-12 8.8E-17 134.1 7.6 211 718-960 120-340 (458)
460 PRK10060 RNase II stability mo 99.3 1.6E-11 3.4E-16 151.7 13.7 158 174-343 96-255 (663)
461 KOG1243 Protein kinase [Genera 99.3 6.5E-11 1.4E-15 136.9 17.4 237 666-957 14-252 (690)
462 PRK13558 bacterio-opsin activa 99.3 5E-11 1.1E-15 148.2 17.2 128 189-316 148-275 (665)
463 cd05146 RIO3_euk RIO kinase fa 99.3 6.1E-11 1.3E-15 122.0 14.7 139 670-816 2-173 (197)
464 cd05151 ChoK Choline Kinase (C 99.3 2.1E-11 4.6E-16 123.7 11.1 127 670-815 3-135 (170)
465 KOG3087 Serine/threonine prote 99.3 4.3E-11 9.4E-16 117.7 12.3 145 669-815 11-164 (229)
466 KOG0601 Cyclin-dependent kinas 99.2 9E-12 2E-16 143.0 6.2 254 660-955 260-518 (524)
467 COG3642 Mn2+-dependent serine/ 99.2 1.6E-10 3.5E-15 114.6 13.6 134 671-816 2-140 (204)
468 TIGR00229 sensory_box PAS doma 99.1 6.7E-10 1.4E-14 100.9 12.9 121 188-312 2-123 (124)
469 PRK13558 bacterio-opsin activa 99.1 4.5E-10 9.8E-15 139.6 15.3 114 474-587 150-267 (665)
470 PRK10060 RNase II stability mo 99.1 5.1E-10 1.1E-14 138.4 15.3 111 474-587 113-228 (663)
471 PRK11359 cyclic-di-GMP phospho 99.1 7.6E-10 1.7E-14 140.7 14.5 140 167-313 118-258 (799)
472 TIGR02938 nifL_nitrog nitrogen 99.1 3.4E-10 7.5E-15 134.9 9.8 111 474-587 6-120 (494)
473 cd05154 ACAD10_11_like Acyl-Co 99.0 1.7E-09 3.8E-14 114.6 12.1 140 671-816 4-206 (223)
474 KOG3741 Poly(A) ribonuclease s 99.0 1E-08 2.3E-13 115.1 18.0 214 678-951 289-521 (655)
475 PF08447 PAS_3: PAS fold; Int 99.0 2.9E-09 6.3E-14 95.9 10.0 86 214-300 1-91 (91)
476 PRK15123 lipopolysaccharide co 98.9 2.4E-08 5.1E-13 108.6 15.3 134 680-815 37-193 (268)
477 PF01163 RIO1: RIO1 family; I 98.9 1.9E-08 4.1E-13 103.3 13.6 127 680-816 1-155 (188)
478 TIGR00229 sensory_box PAS doma 98.9 1.5E-08 3.2E-13 91.9 11.5 111 474-587 5-119 (124)
479 KOG2137 Protein kinase [Signal 98.8 1.5E-09 3.2E-14 126.4 3.9 171 774-966 106-280 (700)
480 PRK11073 glnL nitrogen regulat 98.8 1.3E-08 2.7E-13 116.2 11.1 108 474-587 9-116 (348)
481 PF08447 PAS_3: PAS fold; Int 98.8 1.9E-08 4.2E-13 90.5 9.0 82 497-579 1-91 (91)
482 COG3829 RocR Transcriptional r 98.8 6.4E-08 1.4E-12 110.4 14.4 218 192-587 4-224 (560)
483 cd00130 PAS PAS domain; PAS mo 98.8 1.4E-07 3.1E-12 81.1 13.7 103 198-303 1-103 (103)
484 PRK11360 sensory histidine kin 98.7 1.9E-07 4.2E-12 114.2 16.9 128 182-315 255-383 (607)
485 PRK11073 glnL nitrogen regulat 98.7 1.2E-07 2.6E-12 108.1 13.6 118 187-314 5-122 (348)
486 TIGR02966 phoR_proteo phosphat 98.7 1E-07 2.2E-12 107.4 12.0 113 185-313 2-114 (333)
487 COG0478 RIO-like serine/threon 98.7 1.1E-07 2.4E-12 100.1 11.2 136 667-814 93-249 (304)
488 TIGR02966 phoR_proteo phosphat 98.7 1E-07 2.2E-12 107.4 11.9 102 474-587 8-109 (333)
489 KOG0501 K+-channel KCNQ [Inorg 98.7 1.3E-07 2.8E-12 106.0 11.8 119 474-592 16-143 (971)
490 cd00130 PAS PAS domain; PAS mo 98.6 5.2E-07 1.1E-11 77.6 13.1 99 481-582 1-103 (103)
491 PF13596 PAS_10: PAS domain; P 98.6 1.3E-07 2.8E-12 88.2 9.5 106 191-304 1-106 (106)
492 PRK09902 hypothetical protein; 98.6 4.4E-07 9.5E-12 93.7 14.0 140 674-815 27-178 (216)
493 COG4248 Uncharacterized protei 98.6 3.9E-07 8.4E-12 100.1 13.5 238 668-942 14-291 (637)
494 COG0661 AarF Predicted unusual 98.6 8.2E-08 1.8E-12 112.8 8.6 189 624-818 85-316 (517)
495 PF06293 Kdo: Lipopolysacchari 98.6 5.6E-07 1.2E-11 94.6 14.0 126 689-816 31-170 (206)
496 KOG0501 K+-channel KCNQ [Inorg 98.6 1.6E-07 3.4E-12 105.3 9.8 109 201-309 29-139 (971)
497 PF06176 WaaY: Lipopolysacchar 98.6 8E-07 1.7E-11 92.1 13.9 142 660-814 26-181 (229)
498 PF12860 PAS_7: PAS fold 98.6 2.2E-07 4.8E-12 87.9 8.9 105 195-311 1-115 (115)
499 PRK11388 DNA-binding transcrip 98.6 3.2E-06 7E-11 104.3 21.1 103 474-585 205-309 (638)
500 PRK11360 sensory histidine kin 98.5 5E-07 1.1E-11 110.6 13.4 109 474-588 264-377 (607)
No 1
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.5e-54 Score=461.25 Aligned_cols=336 Identities=54% Similarity=0.973 Sum_probs=294.6
Q ss_pred CCCCCCCCCchhhHHhhh-ccccccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHH
Q 001902 639 PKPHRKDSPPWKAIQKIL-DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAERE 717 (998)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~ 717 (998)
.+|++....-|....... ..+..+..+.|++++.||.|.-|+||+|+...++..+|+|++.+..+..+....+.+.|.+
T Consensus 50 ~kph~~~d~~w~a~~~~~~~~~~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~e 129 (459)
T KOG0610|consen 50 NKPHKGNDVRWEAISSIRNSKDGSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTERE 129 (459)
T ss_pred CCCCCCCchhhhhhccccccCCCccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHH
Confidence 456666666677666555 4667888999999999999999999999999999999999999998888899999999999
Q ss_pred HHHhCCCCCccceeEEEeeCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCc
Q 001902 718 ILDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 797 (998)
Q Consensus 718 il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~N 797 (998)
||..++||.++.+|..|+.+++.|+|||||+||+|..+++++.++.+++..++.|+.+++-||+|||-.|||+|||||+|
T Consensus 130 IL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPEN 209 (459)
T KOG0610|consen 130 ILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPEN 209 (459)
T ss_pred HHHhcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCcEEEEeccCccccCCCCCCCCCcc-----h------------------hhhhccc---CC--CCcccccccc-
Q 001902 798 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT-----N------------------EKKRRHK---GQ--QNPVFMAEPM- 848 (998)
Q Consensus 798 ILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~-----~------------------~~~~~~~---~~--~~~~~~~~~~- 848 (998)
|||.++|++.|+||.++......+....... . ..++..+ .. ..+....++.
T Consensus 210 ILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~ 289 (459)
T KOG0610|consen 210 ILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTG 289 (459)
T ss_pred eEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCC
Confidence 9999999999999999977654443322110 0 0000000 00 0011222333
Q ss_pred cccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHH
Q 001902 849 RASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMY 928 (998)
Q Consensus 849 ~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~ 928 (998)
-.+.+++||-.|+|||++.+..++.++|.|+||+++|||++|..||.|.+..+.+.+|+...+.+|.....+..++|||+
T Consensus 290 ~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr 369 (459)
T KOG0610|consen 290 ARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIR 369 (459)
T ss_pred ccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHH
Confidence 34578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HccccCccCcCCChhcHHHHHcCCCccCCChhhhhcCCCCCCCCCC
Q 001902 929 RLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPL 974 (998)
Q Consensus 929 ~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~ 974 (998)
++|.+||.+|+..+.+|.+|.+||||++++|+.+++..||.++.|.
T Consensus 370 ~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLir~~~PP~iP~~~ 415 (459)
T KOG0610|consen 370 KLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALIRCARPPEIPKPV 415 (459)
T ss_pred HHhccChhhhhccccchHHhhcCccccCCChhheeccCCCcCCCcc
Confidence 9999999999999999999999999999999999999999997665
No 2
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=4.1e-53 Score=467.04 Aligned_cols=309 Identities=42% Similarity=0.717 Sum_probs=266.3
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
.+..++|+++..||+|+||.||+|+-+.||..||+|++++..+....++..+..|..||...++|+||++|..|++..++
T Consensus 137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~L 216 (550)
T KOG0605|consen 137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYL 216 (550)
T ss_pred cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCee
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
||||||++||++..+|.+. +.|+++.++.|+.+++.|+..||+.|+|||||||+|+|||..|++||+|||+|......
T Consensus 217 YLiMEylPGGD~mTLL~~~--~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~ 294 (550)
T KOG0605|consen 217 YLIMEYLPGGDMMTLLMRK--DTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKK 294 (550)
T ss_pred EEEEEecCCccHHHHHHhc--CcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhh
Confidence 9999999999999999885 56999999999999999999999999999999999999999999999999999655432
Q ss_pred CCCCCCc----chhhhhcccCCCCcc----------------cccccccccccccCCCCcccchhhcCCCCCChhHHHHH
Q 001902 821 PQLLLPT----TNEKKRRHKGQQNPV----------------FMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWAL 880 (998)
Q Consensus 821 ~~~~~~~----~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSl 880 (998)
....... .+...........+. ..........+.+|||.|||||++.+.+|+..+|.|||
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSL 374 (550)
T KOG0605|consen 295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSL 374 (550)
T ss_pred hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHH
Confidence 2211100 000000000000000 00011123456799999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCChHHHHHHHHhCC--CCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCC
Q 001902 881 GILLYEMLYGYTPFRGKTRQKTFANILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 958 (998)
Q Consensus 881 G~il~eLltG~~Pf~~~~~~~~~~~i~~~~--~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 958 (998)
|||+||||.|.+||.+.+..+.+.+|+... +.+|....++.+++|||.+||+ ||.+|+. ..+++||.+||||++++
T Consensus 375 G~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG-~~G~~EIK~HPfF~~v~ 452 (550)
T KOG0605|consen 375 GCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLG-SKGAEEIKKHPFFKGVD 452 (550)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcC-cccHHHHhcCCccccCC
Confidence 999999999999999999999999999765 8889999999999999999999 9999999 66799999999999999
Q ss_pred hhhhhcCCCCCCCCC
Q 001902 959 WALVRCMNPPELDAP 973 (998)
Q Consensus 959 ~~~~~~~~~~~~~~p 973 (998)
|..++.+.||..|..
T Consensus 453 W~~l~~~~apfvP~v 467 (550)
T KOG0605|consen 453 WDHLREMPAPFVPQV 467 (550)
T ss_pred cchhhcCCCCCCCCC
Confidence 999999998887543
No 3
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-52 Score=446.25 Aligned_cols=282 Identities=45% Similarity=0.800 Sum_probs=254.9
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
.+..++|++++.||+|+||+||.|+.+.+++.||+|++++..+...........|..||..++||+||.++..|++.+.+
T Consensus 21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kL 100 (357)
T KOG0598|consen 21 MVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKL 100 (357)
T ss_pred cCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeE
Confidence 35568999999999999999999999999999999999999888888889999999999999999999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
|||+||+.||.|+..|.++ +.+++..++.|+..|+.||.|||++|||||||||+|||++.+|+++|+|||+++..-
T Consensus 101 ylVld~~~GGeLf~hL~~e--g~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~-- 176 (357)
T KOG0598|consen 101 YLVLDYLNGGELFYHLQRE--GRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDL-- 176 (357)
T ss_pred EEEEeccCCccHHHHHHhc--CCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcc--
Confidence 9999999999999999876 559999999999999999999999999999999999999999999999999996421
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChH
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 900 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~ 900 (998)
.......++|||+.|||||++.+.+|+..+|.||||+++|+|++|.+||.+.+..
T Consensus 177 -------------------------~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~ 231 (357)
T KOG0598|consen 177 -------------------------KDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVK 231 (357)
T ss_pred -------------------------cCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHH
Confidence 1122345689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhh--hcCCCCCCCC
Q 001902 901 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV--RCMNPPELDA 972 (998)
Q Consensus 901 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~--~~~~~~~~~~ 972 (998)
..+++|.++....+.. .++.++++||+++|.+||.+|+.....+.+|.+||||.+++|..+ ..+.||..+.
T Consensus 232 ~~~~~I~~~k~~~~p~-~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~~l~~k~l~PpF~P~ 304 (357)
T KOG0598|consen 232 KMYDKILKGKLPLPPG-YLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWEKLLAKKLSPPFKPN 304 (357)
T ss_pred HHHHHHhcCcCCCCCc-cCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHHHHHhcCCCCCeecC
Confidence 9999999987443332 368899999999999999999976667999999999999999977 5566655543
No 4
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-52 Score=426.07 Aligned_cols=276 Identities=45% Similarity=0.832 Sum_probs=257.7
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEE
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 741 (998)
..+++|+.++.||.|+||.|.+++++.+|..||+|++.+..+....+++...+|..+|+.+.||+++++++.|.+.+.+|
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~ly 120 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLY 120 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEE
Confidence 55789999999999999999999999999999999999998888888999999999999999999999999999999999
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 821 (998)
|||||++||.|+.++++. +.+++..++.++.||+.||+|||+++|++|||||+|||+|.+|.+||+|||+|+...
T Consensus 121 mvmeyv~GGElFS~Lrk~--~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~--- 195 (355)
T KOG0616|consen 121 MVMEYVPGGELFSYLRKS--GRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVS--- 195 (355)
T ss_pred EEEeccCCccHHHHHHhc--CCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEec---
Confidence 999999999999999874 569999999999999999999999999999999999999999999999999997643
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHH
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 901 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~ 901 (998)
....+.||||.|+|||++...+|+.++|.||||+++|||+.|.+||...+...
T Consensus 196 ---------------------------~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~ 248 (355)
T KOG0616|consen 196 ---------------------------GRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQ 248 (355)
T ss_pred ---------------------------CcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHH
Confidence 22457899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCCh-hcHHHHHcCCCccCCChhhh--hcCCCCCCC
Q 001902 902 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALV--RCMNPPELD 971 (998)
Q Consensus 902 ~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~--~~~~~~~~~ 971 (998)
++.+|+.+++.+|.. .++++++||+++|+.|-.+|.... .+.++|.+||||++++|..+ +.++||..+
T Consensus 249 iY~KI~~~~v~fP~~--fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~i~~r~ie~P~~p 319 (355)
T KOG0616|consen 249 IYEKILEGKVKFPSY--FSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWEAILQRKIEPPFEP 319 (355)
T ss_pred HHHHHHhCcccCCcc--cCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHHHHhhccccCCCCC
Confidence 999999999999875 688999999999999999996654 48999999999999999877 677777765
No 5
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-51 Score=453.89 Aligned_cols=288 Identities=39% Similarity=0.673 Sum_probs=260.6
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCeE
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 740 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~ 740 (998)
....+|...+.||+|+|++|++|+++.+++.||||++.+..+.....++.+..|..+|.+| +||.|++||..|++...+
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL 149 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL 149 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence 3457899999999999999999999999999999999998887788888899999999999 899999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
|+|+||+++|+|.++|++. +.+++..++.++.+|+.||+|||++|||||||||+|||++.+|+++|.|||.|+.++..
T Consensus 150 YFvLe~A~nGdll~~i~K~--Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~ 227 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIKKY--GSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPS 227 (604)
T ss_pred EEEEEecCCCcHHHHHHHh--CcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChh
Confidence 9999999999999999886 56999999999999999999999999999999999999999999999999999887643
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChH
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 900 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~ 900 (998)
.... ..+...........+++||..|.+||+|.....++.+|||+||||||+|+.|.+||.+.+..
T Consensus 228 ~~~~--------------~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney 293 (604)
T KOG0592|consen 228 QKSQ--------------ENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY 293 (604)
T ss_pred hccc--------------cCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHH
Confidence 3221 01111111112246799999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhhhcCCCCCCC
Q 001902 901 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELD 971 (998)
Q Consensus 901 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~ 971 (998)
.++++|+...+.||.. .+..+.+||+++|..||.+|+| +.+|.+||||.+++|..++...||++.
T Consensus 294 liFqkI~~l~y~fp~~--fp~~a~dLv~KLLv~dp~~Rlt----~~qIk~HpFF~~Vdw~nlw~~~PP~l~ 358 (604)
T KOG0592|consen 294 LIFQKIQALDYEFPEG--FPEDARDLIKKLLVRDPSDRLT----SQQIKAHPFFEGVDWENLWQQTPPKLQ 358 (604)
T ss_pred HHHHHHHHhcccCCCC--CCHHHHHHHHHHHccCcccccc----HHHHhhCcccccCChhhhhhcCCCccc
Confidence 9999999998888865 5689999999999999999999 999999999999999999999999985
No 6
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-50 Score=429.93 Aligned_cols=263 Identities=28% Similarity=0.463 Sum_probs=236.0
Q ss_pred cccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC-
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT- 738 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~- 738 (998)
..+..++.+.++.||+|+.|+||+|+|+.|++.+|+|++.. ..+....+++.+|++|++.++|||||.+|+.|..+.
T Consensus 74 ~~i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~--~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~ 151 (364)
T KOG0581|consen 74 NGISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILL--NIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGE 151 (364)
T ss_pred cccCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecc--cCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCc
Confidence 44666789999999999999999999999999999999953 346777889999999999999999999999999988
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
.++|+||||++|+|.+++... +.+++..+..++.++++||.|||. .+||||||||+|||+++.|.|||||||.|..+
T Consensus 152 ~isI~mEYMDgGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~l 229 (364)
T KOG0581|consen 152 EISICMEYMDGGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGIL 229 (364)
T ss_pred eEEeehhhcCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHh
Confidence 599999999999999999875 559999999999999999999996 89999999999999999999999999999654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 897 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~ 897 (998)
.. ....+++||..|||||.+.+..|+.++||||||++++|+++|+.||...
T Consensus 230 vn-----------------------------S~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~ 280 (364)
T KOG0581|consen 230 VN-----------------------------SIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPP 280 (364)
T ss_pred hh-----------------------------hhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCc
Confidence 31 1456789999999999999999999999999999999999999999874
Q ss_pred -----ChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCCh
Q 001902 898 -----TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 959 (998)
Q Consensus 898 -----~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 959 (998)
+..+.+..|+.+..+-.....+|+++++|+..||++||.+||+ +.||++|||+++...
T Consensus 281 ~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s----~~qLl~Hpfi~~~~~ 343 (364)
T KOG0581|consen 281 NPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPS----AKQLLQHPFIKKFED 343 (364)
T ss_pred CCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCC----HHHHhcCHHHhhccc
Confidence 6678888888865443333368999999999999999999999 999999999998544
No 7
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.2e-50 Score=450.21 Aligned_cols=256 Identities=33% Similarity=0.576 Sum_probs=241.7
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
.+|+..+.||+|||+.||.+++..+|..||+|++.+..+......+.+.+|++|.+.|+|||||+++++|++.+++|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 47999999999999999999999999999999999988888899999999999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
|+|..++|..++++. +.+++..++.+++||+.||.|||+++|||||||.+|+|++++.+|||+|||+|..+..+
T Consensus 98 ELC~~~sL~el~Krr--k~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~---- 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRR--KPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD---- 171 (592)
T ss_pred EecCCccHHHHHHhc--CCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCc----
Confidence 999999999999864 67999999999999999999999999999999999999999999999999999664311
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 904 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~ 904 (998)
.....+.||||+|.|||++....++..+||||+||+||-|++|++||...+-.+.+.
T Consensus 172 -----------------------~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~ 228 (592)
T KOG0575|consen 172 -----------------------GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYN 228 (592)
T ss_pred -----------------------ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHH
Confidence 133467899999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCcc
Q 001902 905 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 955 (998)
Q Consensus 905 ~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 955 (998)
+|...+...|. .+|.++++||.+||+.||.+||| ++++|.|+||+
T Consensus 229 ~Ik~~~Y~~P~--~ls~~A~dLI~~lL~~~P~~Rps----l~~vL~h~Ff~ 273 (592)
T KOG0575|consen 229 KIKLNEYSMPS--HLSAEAKDLIRKLLRPNPSERPS----LDEVLDHPFFK 273 (592)
T ss_pred HHHhcCccccc--ccCHHHHHHHHHHhcCCcccCCC----HHHHhcCHhhh
Confidence 99999998888 57999999999999999999999 99999999994
No 8
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.4e-51 Score=433.91 Aligned_cols=261 Identities=33% Similarity=0.507 Sum_probs=230.3
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccCh----hHHHHHHHHHHHHHhCCCCCccceeEEEeeCCe
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR----NKVHRACAEREILDMLDHPFVPALYASFQTKTH 739 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~----~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 739 (998)
.+.|.+.+.||+|+||.|.+|.++.||+.||||++++...... .....+.+|++||++|+|||||+++++|...+.
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 4678999999999999999999999999999999998755442 234456799999999999999999999999999
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecC---CcEEEEeccCccc
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSCL 816 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~---g~vkL~DFG~a~~ 816 (998)
.||||||+.||+|++.+-.+ +.+.+...+.+++||+.||.|||++||+||||||+|||+..+ -.+||+|||+|+.
T Consensus 251 ~YmVlE~v~GGeLfd~vv~n--k~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~ 328 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVVAN--KYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKV 328 (475)
T ss_pred eEEEEEEecCccHHHHHHhc--cccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhc
Confidence 99999999999999999876 458999999999999999999999999999999999999876 6899999999976
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCC---CChhHHHHHHHHHHHHHcCCCC
Q 001902 817 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH---TSAVDWWALGILLYEMLYGYTP 893 (998)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~---~~~sDIwSlG~il~eLltG~~P 893 (998)
.+. .....++||||.|.|||++....+ ..++|||||||+||-+++|.+|
T Consensus 329 ~g~----------------------------~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pP 380 (475)
T KOG0615|consen 329 SGE----------------------------GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPP 380 (475)
T ss_pred ccc----------------------------ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCC
Confidence 541 123467899999999999977543 3488999999999999999999
Q ss_pred CCCCChHH-HHHHHHhCCCCCC--CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCC
Q 001902 894 FRGKTRQK-TFANILHKDLKFP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 958 (998)
Q Consensus 894 f~~~~~~~-~~~~i~~~~~~~~--~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 958 (998)
|.+..... ..+.|.++.+.+. .+..+|.+..+||..||..||++||| +.++|+||||+...
T Consensus 381 FS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s----~~eaL~hpW~~~~~ 444 (475)
T KOG0615|consen 381 FSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPS----ADEALNHPWFKDAP 444 (475)
T ss_pred cccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcC----HHHHhcChhhhccc
Confidence 99877665 7788888877654 55678999999999999999999999 99999999999764
No 9
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-48 Score=440.40 Aligned_cols=296 Identities=40% Similarity=0.778 Sum_probs=262.9
Q ss_pred cccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCC
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT 738 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~ 738 (998)
..+.+++|.+++.||+|+||+|+++..+.+++.||||+++++.+...+.++....|.+|+... +||+++.++.+|++.+
T Consensus 363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~ 442 (694)
T KOG0694|consen 363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE 442 (694)
T ss_pred CcccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC
Confidence 478889999999999999999999999999999999999999999999999999999999988 5999999999999999
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccC
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 818 (998)
++|+||||+.||++..+.+ ...+++..++.|+..|+.||+|||++||||||||.+|||+|.+|++||+|||+++..-
T Consensus 443 ~l~fvmey~~Ggdm~~~~~---~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 443 HLFFVMEYVAGGDLMHHIH---TDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM 519 (694)
T ss_pred eEEEEEEecCCCcEEEEEe---cccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccC
Confidence 9999999999999544433 3569999999999999999999999999999999999999999999999999996521
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 898 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~ 898 (998)
.....++++||||.|||||++.+..|+.++|.||||++||||+.|..||.+.+
T Consensus 520 ---------------------------~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gdd 572 (694)
T KOG0694|consen 520 ---------------------------GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDD 572 (694)
T ss_pred ---------------------------CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 01124678999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCCh-hcHHHHHcCCCccCCChhhh--hcCCCCCCCCCCC
Q 001902 899 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALV--RCMNPPELDAPLF 975 (998)
Q Consensus 899 ~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~--~~~~~~~~~~p~~ 975 (998)
..+.+..|+..+..+|.. +|.++.++|+++|.+||++|+.+- ..+.+|.+||||+.++|..+ +.+.||.. |..
T Consensus 573 Eee~FdsI~~d~~~yP~~--ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L~~r~i~PPf~--P~i 648 (694)
T KOG0694|consen 573 EEEVFDSIVNDEVRYPRF--LSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDLLNRRIKPPFV--PTI 648 (694)
T ss_pred HHHHHHHHhcCCCCCCCc--ccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHHHhhccCCCCCC--ccc
Confidence 999999999999988876 588999999999999999999974 34789999999999999988 55666555 544
Q ss_pred CCccccccccCCchhH
Q 001902 976 ATDTEKEYKVVDPGMQ 991 (998)
Q Consensus 976 ~~~~~~~~~~~~~~~~ 991 (998)
... -|++-++++|-
T Consensus 649 ~~~--~D~snFd~eFt 662 (694)
T KOG0694|consen 649 KGP--EDVSNFDEEFT 662 (694)
T ss_pred CCh--hhhcccchhhh
Confidence 332 34555555553
No 10
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=3.1e-47 Score=391.58 Aligned_cols=261 Identities=27% Similarity=0.463 Sum_probs=223.6
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
++.|+.+.++|+|+||.||+|+++.||+.||||.+... -.++...+-..+||++|++++|+|+|.++++|.....++||
T Consensus 1 MekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Es-edd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLV 79 (396)
T KOG0593|consen 1 MEKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVES-EDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLV 79 (396)
T ss_pred CcHHhhhhccccCcceEEEEeccCCcccEEEEEeeccC-CccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEE
Confidence 35799999999999999999999999999999998754 33455566678999999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
+||| ..++.+-+.+.+. .++.+.++++++|++.|+.|+|++++|||||||+||||+.+|.+||||||+|+.+..
T Consensus 80 FE~~-dhTvL~eLe~~p~-G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~---- 153 (396)
T KOG0593|consen 80 FEYC-DHTVLHELERYPN-GVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSA---- 153 (396)
T ss_pred eeec-chHHHHHHHhccC-CCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcC----
Confidence 9999 4555555666543 399999999999999999999999999999999999999999999999999976542
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 902 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~ 902 (998)
+....+.++.|.+|.|||.+.+ ..|++++||||+||++.||++|.+.|.+.+..++
T Consensus 154 -----------------------pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQ 210 (396)
T KOG0593|consen 154 -----------------------PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQ 210 (396)
T ss_pred -----------------------CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHH
Confidence 2223456789999999999998 7899999999999999999999999999998888
Q ss_pred HHHHHhC-------------------CCCCCCC----------CCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCC
Q 001902 903 FANILHK-------------------DLKFPSS----------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 953 (998)
Q Consensus 903 ~~~i~~~-------------------~~~~~~~----------~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~ 953 (998)
+..|... .+.+|.. +..+.-+.+|+++||..||++|++ .+++|.|||
T Consensus 211 Ly~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~s----c~qll~H~y 286 (396)
T KOG0593|consen 211 LYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLS----CEQLLHHPY 286 (396)
T ss_pred HHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCcccccc----HHHHhcChH
Confidence 8777652 1122221 334556789999999999999999 999999999
Q ss_pred ccCCC
Q 001902 954 FKGVN 958 (998)
Q Consensus 954 f~~~~ 958 (998)
|.++.
T Consensus 287 Fd~~~ 291 (396)
T KOG0593|consen 287 FDGFI 291 (396)
T ss_pred HHHHH
Confidence 97643
No 11
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-46 Score=398.71 Aligned_cols=259 Identities=29% Similarity=0.507 Sum_probs=228.5
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.++|.+.+.||+|+||+||+|+++.++..||||.+.+... .....+.+..|+.||+.++|||||.+++++...+++|||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 4689999999999999999999999999999999987644 556677888999999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecC------CcEEEEeccCcccc
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN------GHVSLTDFDLSCLT 817 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~------g~vkL~DFG~a~~~ 817 (998)
||||.||+|.+++++. +.+++..++.++.||+.||++||+++||||||||.|||++.. -.+||+|||+|+.+
T Consensus 88 MEyC~gGDLs~yi~~~--~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L 165 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRRR--GRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL 165 (429)
T ss_pred EEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence 9999999999999886 459999999999999999999999999999999999999865 46899999999765
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 897 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~ 897 (998)
. +.....+.||+|.|||||++....|+.|+|+||+|+|+|+|++|++||...
T Consensus 166 ~----------------------------~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~ 217 (429)
T KOG0595|consen 166 Q----------------------------PGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE 217 (429)
T ss_pred C----------------------------chhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 3 223456789999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHhCCCCCCCC-CCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 898 TRQKTFANILHKDLKFPSS-TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 898 ~~~~~~~~i~~~~~~~~~~-~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
+..+.+..+.++.-..+.. ...+..+.+|+...|+.+|.+|.+ -.+-+.|+++..-
T Consensus 218 t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~----~~~~~~~~~l~~~ 274 (429)
T KOG0595|consen 218 TPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRIS----FEDFFDHPFLAAN 274 (429)
T ss_pred CHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccCc----hHHhhhhhhcccC
Confidence 9998888777654333322 234556679999999999999999 7777888887763
No 12
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.5e-47 Score=386.05 Aligned_cols=251 Identities=29% Similarity=0.475 Sum_probs=223.0
Q ss_pred ccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeE-EEeeCCe-E
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYA-SFQTKTH-V 740 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~-~~~~~~~-~ 740 (998)
...+|++++.||.|+||.||+|.+..+|+.+|.|.+..+ ..+....+....|+.+|++|+|||||++++ .|..++. +
T Consensus 17 ~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~-~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evl 95 (375)
T KOG0591|consen 17 TLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFG-MMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVL 95 (375)
T ss_pred cHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchh-hccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhh
Confidence 356899999999999999999999999999999999855 456677788999999999999999999998 5555444 8
Q ss_pred EEEEecCCCCchhHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHH--CC--ceeccCCCCcEEEecCCcEEEEeccCc
Q 001902 741 CLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHC--QG--IIYRDLKPENVLLQGNGHVSLTDFDLS 814 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~~LH~--~~--IiHrDLkP~NILi~~~g~vkL~DFG~a 814 (998)
+||||||.+|+|..++++ +....+++..+++++.|++.||..+|+ .+ |+||||||.||+++.+|.+||+|||++
T Consensus 96 nivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~ 175 (375)
T KOG0591|consen 96 NIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLG 175 (375)
T ss_pred HHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhH
Confidence 999999999999999974 445679999999999999999999999 45 999999999999999999999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCC
Q 001902 815 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 894 (998)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf 894 (998)
+.+... .....+++|||+||+||.+.+.+|+.+|||||+||++|||+.-++||
T Consensus 176 r~l~s~---------------------------~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF 228 (375)
T KOG0591|consen 176 RFLSSK---------------------------TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPF 228 (375)
T ss_pred hHhcch---------------------------hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCc
Confidence 765421 12345789999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCC
Q 001902 895 RGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS 941 (998)
Q Consensus 895 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~ 941 (998)
.+.+......+|.+++.+.-.....|..+..||..|+..||..||+.
T Consensus 229 ~g~n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 229 YGDNLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred ccccHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCc
Confidence 99999999999999977633335678899999999999999999984
No 13
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=7.5e-46 Score=407.25 Aligned_cols=256 Identities=33% Similarity=0.542 Sum_probs=234.9
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|.+.+.||+|+||.||+++.+.+.+.||+|.+.+... .....+.+.+|++|++.++||||+.++++|+...++|+|+
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr-~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVt 80 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR-NEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVT 80 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCC-chHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEe
Confidence 579999999999999999999999999999999987543 3445678899999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
|||.| +|+.++... +.++++.++.++.+++.||.|||+.+|+|||+||.|||+..+|++|+||||+|+.++....
T Consensus 81 e~a~g-~L~~il~~d--~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~-- 155 (808)
T KOG0597|consen 81 EYAVG-DLFTILEQD--GKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTS-- 155 (808)
T ss_pred hhhhh-hHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCce--
Confidence 99965 999999875 5599999999999999999999999999999999999999999999999999988763222
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 904 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~ 904 (998)
.-..+.|||.|||||.+.+.+|+..+|+||||||+|||++|++||.........+
T Consensus 156 -------------------------vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~ 210 (808)
T KOG0597|consen 156 -------------------------VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVK 210 (808)
T ss_pred -------------------------eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHH
Confidence 2345679999999999999999999999999999999999999999999899999
Q ss_pred HHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 905 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 905 ~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
.|...+.++|. ..|..+.+||+.+|.+||.+|++ ..+|+.|||.++.
T Consensus 211 ~I~~d~v~~p~--~~S~~f~nfl~gLL~kdP~~Rlt----W~~Ll~HpF~k~~ 257 (808)
T KOG0597|consen 211 SILKDPVKPPS--TASSSFVNFLQGLLIKDPAQRLT----WTDLLGHPFWKGK 257 (808)
T ss_pred HHhcCCCCCcc--cccHHHHHHHHHHhhcChhhccc----HHHHhcChHHhhh
Confidence 99999888887 46889999999999999999999 9999999999884
No 14
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.8e-45 Score=411.27 Aligned_cols=263 Identities=31% Similarity=0.539 Sum_probs=239.4
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.+.|++.+.||.|+.|.|-+|++..||+..|||++.+...........+.+||-||+.+.||||+++|+++.+..++|+|
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv 90 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV 90 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence 46799999999999999999999999999999999987666666778899999999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
.||++||.|++++-++ +++++..+..+++||+.|+.|||..+|+||||||+|+|++..+++||+|||+|......
T Consensus 91 lEyv~gGELFdylv~k--G~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g--- 165 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVRK--GPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPG--- 165 (786)
T ss_pred EEecCCchhHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCC---
Confidence 9999999999999886 56999999999999999999999999999999999999999999999999999553211
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCC-ChhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHT-SAVDWWALGILLYEMLYGYTPFRGKTRQKT 902 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~-~~sDIwSlG~il~eLltG~~Pf~~~~~~~~ 902 (998)
..-.+-||+|.|.|||++.|.+|. .++||||+|+|||.|++|++||.+.+-...
T Consensus 166 -------------------------klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~L 220 (786)
T KOG0588|consen 166 -------------------------KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVL 220 (786)
T ss_pred -------------------------ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHH
Confidence 123456999999999999999885 599999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhh
Q 001902 903 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 962 (998)
Q Consensus 903 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~ 962 (998)
+.++.++.+..| ..++.++++||.+||..||+.|+| .++|++|||+++..-.-.
T Consensus 221 LlKV~~G~f~MP--s~Is~eaQdLLr~ml~VDp~~RiT----~~eI~kHP~l~g~~~~~~ 274 (786)
T KOG0588|consen 221 LLKVQRGVFEMP--SNISSEAQDLLRRMLDVDPSTRIT----TEEILKHPFLSGYTSLPS 274 (786)
T ss_pred HHHHHcCcccCC--CcCCHHHHHHHHHHhccCcccccc----HHHHhhCchhhcCCCCCh
Confidence 999999988877 457999999999999999999999 999999999999654433
No 15
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-45 Score=399.46 Aligned_cols=263 Identities=28% Similarity=0.455 Sum_probs=227.7
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCccceeEEEeeCC-e
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKT-H 739 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~-~ 739 (998)
+..++|.++++||.|+||.||+|..+.+|..||||.+++.... .+.+ .-++|+.-|++|+ ||||+++++++.+.+ .
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~-~nLREvksL~kln~hpniikL~Evi~d~~~~ 84 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEEC-MNLREVKSLRKLNPHPNIIKLKEVIRDNDRI 84 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHH-HHHHHHHHHHhcCCCCcchhhHHHhhccCce
Confidence 3467999999999999999999999999999999999876543 2222 2357999999998 999999999998877 9
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCC
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 819 (998)
+|+||||| ...|+++++.+ ...+++..++.|+.||++||+|+|++|+.||||||+|||+..+..+||+|||+|+....
T Consensus 85 L~fVfE~M-d~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S 162 (538)
T KOG0661|consen 85 LYFVFEFM-DCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRS 162 (538)
T ss_pred EeeeHHhh-hhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEeccccccccccc
Confidence 99999999 88999999887 67899999999999999999999999999999999999999999999999999976542
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCCCC
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKT 898 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~~~ 898 (998)
. ...+.++.|.+|+|||+|.. ..|+.+.||||+|||++|+++-++.|.|.+
T Consensus 163 k----------------------------pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~s 214 (538)
T KOG0661|consen 163 K----------------------------PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGAS 214 (538)
T ss_pred C----------------------------CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCc
Confidence 2 23456789999999999865 568889999999999999999999999999
Q ss_pred hHHHHHHHHh--C-----------------CCCCCCC---------CCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 899 RQKTFANILH--K-----------------DLKFPSS---------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 899 ~~~~~~~i~~--~-----------------~~~~~~~---------~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
..+++.+|.. + ++.+|.. ...+.++.+||.+||.+||.+||| |.++|+
T Consensus 215 E~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpT----A~~al~ 290 (538)
T KOG0661|consen 215 EIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPT----ASQALQ 290 (538)
T ss_pred HHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCcc----HHHHhc
Confidence 9888887764 1 2233322 235778999999999999999999 999999
Q ss_pred CCCccCCChh
Q 001902 951 HPFFKGVNWA 960 (998)
Q Consensus 951 Hp~f~~~~~~ 960 (998)
||||+--...
T Consensus 291 ~pffq~~~~~ 300 (538)
T KOG0661|consen 291 HPFFQVGRAS 300 (538)
T ss_pred Cccccccccc
Confidence 9999985444
No 16
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-44 Score=406.54 Aligned_cols=262 Identities=34% Similarity=0.615 Sum_probs=234.8
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccCh--hHHHHHHHHHHHHHhCC-CCCccceeEEEeeCC
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR--NKVHRACAEREILDMLD-HPFVPALYASFQTKT 738 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~--~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~ 738 (998)
...+.|.+.+.||+|+||+|++|.+..++..||+|++.+...... .....+.+|+.+++.++ ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 446799999999999999999999999999999998876533211 23456668999999998 999999999999999
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecC-CcEEEEeccCcccc
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLT 817 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~-g~vkL~DFG~a~~~ 817 (998)
.+|+|||||.||+|++++... +.+.+..++.++.||+.||+|||++||+||||||+|||++.+ +++||+|||++...
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~~--g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~ 171 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVNK--GRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAIS 171 (370)
T ss_pred eEEEEEEecCCccHHHHHHHc--CCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEecccccccc
Confidence 999999999999999999883 569999999999999999999999999999999999999999 99999999999654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCC-CC-ChhHHHHHHHHHHHHHcCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HT-SAVDWWALGILLYEMLYGYTPFR 895 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-~~-~~sDIwSlG~il~eLltG~~Pf~ 895 (998)
. .......+.+||+.|+|||++.+.. |+ .++||||+|++||.|++|+.||.
T Consensus 172 ~---------------------------~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~ 224 (370)
T KOG0583|consen 172 P---------------------------GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFD 224 (370)
T ss_pred C---------------------------CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCC
Confidence 2 0112345679999999999999977 75 69999999999999999999999
Q ss_pred CCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 896 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 896 ~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
..+....+..|..+.+.+|.... |.++++|+.+||..||.+|++ +.++++||||+..
T Consensus 225 d~~~~~l~~ki~~~~~~~p~~~~-S~~~~~Li~~mL~~~P~~R~t----~~~i~~h~w~~~~ 281 (370)
T KOG0583|consen 225 DSNVPNLYRKIRKGEFKIPSYLL-SPEARSLIEKMLVPDPSTRIT----LLEILEHPWFQKE 281 (370)
T ss_pred CccHHHHHHHHhcCCccCCCCcC-CHHHHHHHHHHcCCCcccCCC----HHHHhhChhhccC
Confidence 99999999999999999998765 999999999999999999999 9999999999974
No 17
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.4e-45 Score=367.52 Aligned_cols=262 Identities=35% Similarity=0.588 Sum_probs=243.7
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
...+++|++.+.||.|.||.||+|+.++++-.||+|++.+..+......+++.+|++|...|+||||+++|++|.+...+
T Consensus 18 ~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~ri 97 (281)
T KOG0580|consen 18 TWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRI 97 (281)
T ss_pred ccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheecccee
Confidence 34567999999999999999999999999999999999987766666778899999999999999999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
||++||.++|+|+..|..+....+++.....++.|++.||.|+|.++||||||||+|+|++..|.+||+|||.+..
T Consensus 98 yLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~---- 173 (281)
T KOG0580|consen 98 YLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVH---- 173 (281)
T ss_pred EEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceee----
Confidence 9999999999999999976677899999999999999999999999999999999999999999999999999843
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChH
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 900 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~ 900 (998)
.++....+.|||..|.+||+..+..++..+|+|++|++.||++.|.+||...+..
T Consensus 174 -------------------------~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~ 228 (281)
T KOG0580|consen 174 -------------------------APSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHS 228 (281)
T ss_pred -------------------------cCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhH
Confidence 2345567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 901 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 901 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
+.+.+|.+.++.+| ..++.++.+||.+||.++|.+|.. +.+++.|||+.+.
T Consensus 229 etYkrI~k~~~~~p--~~is~~a~dlI~~ll~~~p~~r~~----l~~v~~hpwI~a~ 279 (281)
T KOG0580|consen 229 ETYKRIRKVDLKFP--STISGGAADLISRLLVKNPIERLA----LTEVMDHPWIVAN 279 (281)
T ss_pred HHHHHHHHccccCC--cccChhHHHHHHHHhccCcccccc----HHHHhhhHHHHhc
Confidence 99999999998888 457899999999999999999999 9999999998753
No 18
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-44 Score=374.47 Aligned_cols=288 Identities=41% Similarity=0.752 Sum_probs=261.6
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
.+-+++|..++.||+|.||+|-+|+.+.+++.||+|+++++.+...+.+.....|-++|+..+||.+..+...|+..+.+
T Consensus 164 kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drl 243 (516)
T KOG0690|consen 164 KVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRL 243 (516)
T ss_pred eeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceE
Confidence 45578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
|+||||++||.|+-.|.+. ..+++...+.+-..|+.||.|||+++||.||||.+|+|+|.+|++||.|||+++..-
T Consensus 244 CFVMeyanGGeLf~HLsre--r~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I-- 319 (516)
T KOG0690|consen 244 CFVMEYANGGELFFHLSRE--RVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI-- 319 (516)
T ss_pred EEEEEEccCceEeeehhhh--hcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcc--
Confidence 9999999999999988774 569999999999999999999999999999999999999999999999999985421
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChH
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 900 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~ 900 (998)
......+++||||.|+|||++....|+..+|.|.+|+++|||+||++||...+..
T Consensus 320 -------------------------~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~ 374 (516)
T KOG0690|consen 320 -------------------------KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE 374 (516)
T ss_pred -------------------------cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh
Confidence 0112456889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCCh-hcHHHHHcCCCccCCChhhh--hcCCCCCCCCCCCCC
Q 001902 901 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALV--RCMNPPELDAPLFAT 977 (998)
Q Consensus 901 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~--~~~~~~~~~~p~~~~ 977 (998)
..+.-|+.+++.+|.. ++++++.||..+|.+||.+|+..- +.+.++.+|+||..++|... ..+.||..+...-.|
T Consensus 375 kLFeLIl~ed~kFPr~--ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~~~~Kki~PPfKPqVtSet 452 (516)
T KOG0690|consen 375 KLFELILMEDLKFPRT--LSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEATYRKKIEPPFKPQVTSET 452 (516)
T ss_pred HHHHHHHhhhccCCcc--CCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHHHHHhccCCCCCCCccccc
Confidence 9999999999999876 689999999999999999999864 46999999999999999876 667777776555444
Q ss_pred cc
Q 001902 978 DT 979 (998)
Q Consensus 978 ~~ 979 (998)
|+
T Consensus 453 DT 454 (516)
T KOG0690|consen 453 DT 454 (516)
T ss_pred ch
Confidence 44
No 19
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-46 Score=369.56 Aligned_cols=261 Identities=30% Similarity=0.490 Sum_probs=232.7
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEE
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 741 (998)
+..+.|.+...||+|.|+.||++.+..+|+.+|+|++........ ..+.+.+|+.|.+.|+||||+++++.+...+..|
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~-~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~y 86 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQHPNIVRLHDSIQEESFHY 86 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc-cHHHHHHHHHHHHhcCCCcEeehhhhhcccceeE
Confidence 345789999999999999999999999999999999886655444 5678889999999999999999999999999999
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecC---CcEEEEeccCccccC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSCLTS 818 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~---g~vkL~DFG~a~~~~ 818 (998)
||+|+|.|++|..-+-.+ ..+++..+..+++||+++|.|+|.+|||||||||.|+|+.+. .-+||+|||+|...+
T Consensus 87 lvFe~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~ 164 (355)
T KOG0033|consen 87 LVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN 164 (355)
T ss_pred EEEecccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeC
Confidence 999999999987544332 458999999999999999999999999999999999999753 469999999996543
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 898 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~ 898 (998)
........+|||.|||||++...+|+..+|||+.|++||-|+.|++||.+.+
T Consensus 165 ----------------------------~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~ 216 (355)
T KOG0033|consen 165 ----------------------------DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED 216 (355)
T ss_pred ----------------------------CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCcc
Confidence 1123456789999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCCCCC--CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 899 RQKTFANILHKDLKFP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 899 ~~~~~~~i~~~~~~~~--~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
....+..|+++...++ .+..+++++++|+++||..||.+|+| +.++|+|||+...
T Consensus 217 ~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIt----a~EAL~HpWi~~r 273 (355)
T KOG0033|consen 217 QHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRIT----ADEALKHPWICNR 273 (355)
T ss_pred HHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhcc----HHHHhCCchhcch
Confidence 9999999999876654 57789999999999999999999999 9999999999873
No 20
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.6e-44 Score=393.57 Aligned_cols=262 Identities=27% Similarity=0.402 Sum_probs=224.7
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC--Ce
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--TH 739 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~~ 739 (998)
...+.|+.+.+||+|.||.||+|++..+|+.||+|.+..+.. +.....-..+||.||++|+||||+++.+..... ..
T Consensus 114 r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~-~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~s 192 (560)
T KOG0600|consen 114 RRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNE-KEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGS 192 (560)
T ss_pred cchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccC-CCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCce
Confidence 345789999999999999999999999999999999987643 344556677899999999999999999988765 68
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCC
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 819 (998)
+|||+||| ..+|..++... +-.+++.+++.|+.||+.||+|||++||+|||||.+|||||.+|.+||+|||+|..+..
T Consensus 193 iYlVFeYM-dhDL~GLl~~p-~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~ 270 (560)
T KOG0600|consen 193 IYLVFEYM-DHDLSGLLSSP-GVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTP 270 (560)
T ss_pred EEEEEecc-cchhhhhhcCC-CcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccC
Confidence 99999999 77888888653 35699999999999999999999999999999999999999999999999999976542
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCCCCCCC
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKT 898 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf~~~~ 898 (998)
... ...+..+.|++|.|||.|.|. .|+.++|+||+||||.||+.|++.|.+.+
T Consensus 271 ~~~--------------------------~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~t 324 (560)
T KOG0600|consen 271 SGS--------------------------APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRT 324 (560)
T ss_pred CCC--------------------------cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCcc
Confidence 221 124566889999999999885 68999999999999999999999999999
Q ss_pred hHHHHHHHHhCC----------CCCCC-----------------CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 899 RQKTFANILHKD----------LKFPS-----------------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 899 ~~~~~~~i~~~~----------~~~~~-----------------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
..+++..|.+-. ..+|. ...++..+.+|+..||+.||.+|.| |.++|+|
T Consensus 325 EveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~t----A~~aL~s 400 (560)
T KOG0600|consen 325 EVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGT----ASSALQS 400 (560)
T ss_pred HHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCcccccc----HHHHhcC
Confidence 999999887621 01110 1224667789999999999999999 9999999
Q ss_pred CCccC
Q 001902 952 PFFKG 956 (998)
Q Consensus 952 p~f~~ 956 (998)
+||..
T Consensus 401 eyF~t 405 (560)
T KOG0600|consen 401 EYFTT 405 (560)
T ss_pred ccccc
Confidence 99954
No 21
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2e-44 Score=390.82 Aligned_cols=266 Identities=34% Similarity=0.560 Sum_probs=228.2
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccC-----------hhHHHHHHHHHHHHHhCCCCCccce
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-----------RNKVHRACAEREILDMLDHPFVPAL 730 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~-----------~~~~~~~~~E~~il~~l~h~nIv~l 730 (998)
..+++|++++.||+|.||.|.+|++..+++.||||++.+..... ....+...+||.||++|.|||||+|
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 34579999999999999999999999999999999998643221 1234688899999999999999999
Q ss_pred eEEEee--CCeEEEEEecCCCCchhHHHhhCCCCC-CCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEE
Q 001902 731 YASFQT--KTHVCLITDYCPGGELFLLLDRQPTKV-LKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 807 (998)
Q Consensus 731 ~~~~~~--~~~~~lV~E~~~ggsL~~~l~~~~~~~-l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vk 807 (998)
+++..+ .+.+|||+|||..|.+...-.. +. +++.++++|+++++.||+|||.+|||||||||+|+|++++|+||
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~p~d---~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VK 250 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWCPPD---KPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVK 250 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccCCCC---cccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEE
Confidence 999975 5789999999998887654332 33 99999999999999999999999999999999999999999999
Q ss_pred EEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCC----CCChhHHHHHHHH
Q 001902 808 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALGIL 883 (998)
Q Consensus 808 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~----~~~~sDIwSlG~i 883 (998)
|+|||.+......... .. ...-...+|||.|+|||.+.+.. .+.+.||||+|++
T Consensus 251 IsDFGVs~~~~~~~~~---~~-------------------d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVT 308 (576)
T KOG0585|consen 251 ISDFGVSNEFPQGSDE---GS-------------------DDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVT 308 (576)
T ss_pred eeccceeeecccCCcc---cc-------------------HHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhh
Confidence 9999999654322100 00 00112258999999999987732 3458999999999
Q ss_pred HHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 884 LYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 884 l~eLltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
||.|+.|+.||.+....+.+.+|+...+.+|....+...+++||.+||++||++|++ +.+|..|||...
T Consensus 309 LYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~----l~~ik~Hpwvt~ 377 (576)
T KOG0585|consen 309 LYCLLFGQLPFFDDFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRIT----LPDIKLHPWVTR 377 (576)
T ss_pred HHHhhhccCCcccchHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheee----hhhheecceecc
Confidence 999999999999999999999999999999999888999999999999999999999 999999999886
No 22
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=9.5e-44 Score=395.01 Aligned_cols=267 Identities=40% Similarity=0.728 Sum_probs=234.9
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++++.||+|+||.||+|.+..+++.||+|++.............+.+|+.+++.++||||+++++++.+.+.+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 47999999999999999999999999999999997654434445567888999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||+++++|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 81 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~----- 153 (291)
T cd05612 81 EYVPGGELFSYLRNS--GRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD----- 153 (291)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccC-----
Confidence 999999999999765 4589999999999999999999999999999999999999999999999999854320
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 904 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~ 904 (998)
.....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+.
T Consensus 154 -------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~ 208 (291)
T cd05612 154 -------------------------RTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYE 208 (291)
T ss_pred -------------------------CcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 1123469999999999999999999999999999999999999999998888888
Q ss_pred HHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCC-hhcHHHHHcCCCccCCChhhhhcC
Q 001902 905 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNWALVRCM 965 (998)
Q Consensus 905 ~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~-~~~a~elL~Hp~f~~~~~~~~~~~ 965 (998)
.+......++.. .+..+++||.+||..||.+||+. +..+.++++||||+.++|..+...
T Consensus 209 ~i~~~~~~~~~~--~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~ 268 (291)
T cd05612 209 KILAGKLEFPRH--LDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDWDDVPQR 268 (291)
T ss_pred HHHhCCcCCCcc--CCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCCHHHHhcC
Confidence 888887766654 47889999999999999999952 234999999999999999877443
No 23
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-44 Score=383.65 Aligned_cols=273 Identities=26% Similarity=0.407 Sum_probs=238.2
Q ss_pred cccccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC
Q 001902 658 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 737 (998)
Q Consensus 658 ~~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~ 737 (998)
....++.+.|++...||.|..++||+|+...++.+||||++..+...+ ..+.+..|+..|..++||||++++..|..+
T Consensus 19 ~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~--~ld~l~kE~~~msl~~HPNIv~~~~sFvv~ 96 (516)
T KOG0582|consen 19 KEFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNN--DLDALRKEVQTMSLIDHPNIVTYHCSFVVD 96 (516)
T ss_pred ccCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhh--hHHHHHHHHHHhhhcCCCCcceEEEEEEec
Confidence 345677889999999999999999999999999999999998765433 378899999999999999999999999999
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
+.+|+||.||.+|++.++++..-...+++..+..|++++++||.|||.+|-||||||+.||||+.+|.|||+|||.+..+
T Consensus 97 ~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l 176 (516)
T KOG0582|consen 97 SELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASL 176 (516)
T ss_pred ceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeee
Confidence 99999999999999999998765556999999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCccccccccccc-ccccCCCCcccchhhcC--CCCCChhHHHHHHHHHHHHHcCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRAS-NSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPF 894 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~gt~~y~aPE~l~~--~~~~~~sDIwSlG~il~eLltG~~Pf 894 (998)
-.. + ..+... .+++||++|||||++.. .+|+.|+||||||++..||++|..||
T Consensus 177 ~~~----------------G--------~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf 232 (516)
T KOG0582|consen 177 FDS----------------G--------DRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPF 232 (516)
T ss_pred ccc----------------C--------ceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCc
Confidence 311 0 111222 67899999999999754 57899999999999999999999999
Q ss_pred CCCChHHHHHHHHhCCCCCCCC--------CCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChh
Q 001902 895 RGKTRQKTFANILHKDLKFPSS--------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 960 (998)
Q Consensus 895 ~~~~~~~~~~~i~~~~~~~~~~--------~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~ 960 (998)
....+...+..-+++..+.+.. ...+..++.++..||.+||.+||| +.++|+|+||+..+-.
T Consensus 233 ~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRpt----AskLlkh~FFk~~k~~ 302 (516)
T KOG0582|consen 233 SKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPT----ASKLLKHAFFKKAKSK 302 (516)
T ss_pred ccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCC----HHHHhccHHHhhccch
Confidence 9999988887777777654432 334667889999999999999999 9999999999986543
No 24
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-44 Score=401.58 Aligned_cols=267 Identities=27% Similarity=0.456 Sum_probs=235.2
Q ss_pred HHhhhccccccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcccee
Q 001902 652 IQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALY 731 (998)
Q Consensus 652 ~~~~~~~~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~ 731 (998)
++.+...+.+. ..|....+||+|+.|.||.|....+++.||+|.+..... ...+-+.+|+.+|+..+|+|||.++
T Consensus 262 l~~v~~~~dP~--~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q---~~keLilnEi~Vm~~~~H~NiVnfl 336 (550)
T KOG0578|consen 262 LKRVVSQGDPR--SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQ---PKKELLLNEILVMRDLHHPNIVNFL 336 (550)
T ss_pred hheeccCCChh--hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccC---CchhhhHHHHHHHHhccchHHHHHH
Confidence 33344445443 479999999999999999999999999999999986533 3346688999999999999999999
Q ss_pred EEEeeCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEec
Q 001902 732 ASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 811 (998)
Q Consensus 732 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DF 811 (998)
+.|...+.+|+|||||+||+|.+++... .+++.++..|+++++.||+|||.+||||||||.+|||++.+|.+||+||
T Consensus 337 ~Sylv~deLWVVMEym~ggsLTDvVt~~---~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDF 413 (550)
T KOG0578|consen 337 DSYLVGDELWVVMEYMEGGSLTDVVTKT---RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDF 413 (550)
T ss_pred HHhcccceeEEEEeecCCCchhhhhhcc---cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeee
Confidence 9999999999999999999999999763 4999999999999999999999999999999999999999999999999
Q ss_pred cCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCC
Q 001902 812 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGY 891 (998)
Q Consensus 812 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~ 891 (998)
|++..+... .....+.+|||+|||||++....|++++||||||++++||+-|+
T Consensus 414 GFcaqi~~~---------------------------~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGE 466 (550)
T KOG0578|consen 414 GFCAQISEE---------------------------QSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGE 466 (550)
T ss_pred eeeeccccc---------------------------cCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCC
Confidence 999654311 12456789999999999999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHHh-CCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 892 TPFRGKTRQKTFANILH-KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 892 ~Pf~~~~~~~~~~~i~~-~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
+||...++...+..|.. +...+.....+|+.+++||.+||+.|+.+|++ |.+||+||||+..
T Consensus 467 PPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~Ras----A~eLL~HpFl~~a 529 (550)
T KOG0578|consen 467 PPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRAS----AKELLEHPFLKMA 529 (550)
T ss_pred CCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCC----HHHHhcChhhhhc
Confidence 99998888777776664 55666677789999999999999999999999 9999999999643
No 25
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=8.5e-44 Score=361.13 Aligned_cols=273 Identities=26% Similarity=0.448 Sum_probs=229.7
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
.+|..++.||+|.||.||+|++..+|+.||||.++.....+. ......+||++|+.++|+||+.++++|...+.+.||+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdG-i~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVf 80 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDG-INRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVF 80 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccC-ccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEE
Confidence 479999999999999999999999999999999987643332 2345678999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||| ..+|...++.. ...++..+++.|+.++++||+|||.+.|+||||||+|+||+++|.+||+|||+|+.++....
T Consensus 81 Efm-~tdLe~vIkd~-~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~-- 156 (318)
T KOG0659|consen 81 EFM-PTDLEVVIKDK-NIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR-- 156 (318)
T ss_pred Eec-cccHHHHhccc-ccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCc--
Confidence 999 77999998765 46799999999999999999999999999999999999999999999999999987653322
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 903 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~ 903 (998)
.....+-|.+|.|||.+.|. .|+..+||||.|||+.||+-|.+.|.|.+..+++
T Consensus 157 -------------------------~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL 211 (318)
T KOG0659|consen 157 -------------------------IQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQL 211 (318)
T ss_pred -------------------------ccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHH
Confidence 22233789999999999885 6888999999999999999999999999999999
Q ss_pred HHHHhCC-----CCCCC---------------------CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 904 ANILHKD-----LKFPS---------------------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 904 ~~i~~~~-----~~~~~---------------------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
..|.+-- -.+|+ ....+.++.+|+.+||..||.+|++ +.|+|+|+||+..
T Consensus 212 ~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rit----a~qaL~~~yf~~~ 287 (318)
T KOG0659|consen 212 SKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRIT----ASQALKHPYFKSL 287 (318)
T ss_pred HHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhccc----HHHHhcchhhhcC
Confidence 8887621 01111 1234667899999999999999999 9999999999974
Q ss_pred ChhhhhcCCCCCCCCCCC
Q 001902 958 NWALVRCMNPPELDAPLF 975 (998)
Q Consensus 958 ~~~~~~~~~~~~~~~p~~ 975 (998)
-. ...|.+++.|.-
T Consensus 288 P~----pt~~~~lp~p~~ 301 (318)
T KOG0659|consen 288 PL----PTPPSKLPIPST 301 (318)
T ss_pred CC----CCChhhCcCCcc
Confidence 22 223445555543
No 26
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.7e-43 Score=400.02 Aligned_cols=268 Identities=40% Similarity=0.768 Sum_probs=237.5
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEE
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 741 (998)
...++|++.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++...+.+|
T Consensus 15 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 94 (329)
T PTZ00263 15 WKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVY 94 (329)
T ss_pred CCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEE
Confidence 34578999999999999999999999999999999998764444455677889999999999999999999999999999
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 821 (998)
+||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 95 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~-- 170 (329)
T PTZ00263 95 FLLEFVVGGELFTHLRKA--GRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD-- 170 (329)
T ss_pred EEEcCCCCChHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCC--
Confidence 999999999999999765 4589999999999999999999999999999999999999999999999999854320
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHH
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 901 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~ 901 (998)
......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+...
T Consensus 171 ----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~ 222 (329)
T PTZ00263 171 ----------------------------RTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR 222 (329)
T ss_pred ----------------------------CcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHH
Confidence 1123469999999999999999999999999999999999999999988888
Q ss_pred HHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCC-hhcHHHHHcCCCccCCChhhhh
Q 001902 902 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNWALVR 963 (998)
Q Consensus 902 ~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~-~~~a~elL~Hp~f~~~~~~~~~ 963 (998)
.+..+..+...+|.. .+..+.+||.+||+.||.+||+. .+.+.+|++||||++.+|..+.
T Consensus 223 ~~~~i~~~~~~~p~~--~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~~~~~~~ 283 (329)
T PTZ00263 223 IYEKILAGRLKFPNW--FDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANWDKLY 283 (329)
T ss_pred HHHHHhcCCcCCCCC--CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCCCHHHHH
Confidence 888888877666543 67889999999999999999974 2458999999999999998774
No 27
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-45 Score=427.66 Aligned_cols=290 Identities=38% Similarity=0.672 Sum_probs=261.6
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
.+..++|.+++.||+|+||.|.+++++.+++.||+|++.+-.+..+.....|..|..||...+++-|+.++..|+++.++
T Consensus 71 rl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~L 150 (1317)
T KOG0612|consen 71 RLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYL 150 (1317)
T ss_pred hCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccce
Confidence 35678999999999999999999999999999999999987777777788899999999999999999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
|+|||||+||+|..+|.+.. .+++..+++|+..|+.||..||+.|.|||||||+|||+|..|++||+|||.+..+..+
T Consensus 151 YlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~d 228 (1317)
T KOG0612|consen 151 YLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDAD 228 (1317)
T ss_pred EEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCC
Confidence 99999999999999998863 6999999999999999999999999999999999999999999999999988665422
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhc----C-CCCCChhHHHHHHHHHHHHHcCCCCCC
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA----G-AGHTSAVDWWALGILLYEMLYGYTPFR 895 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~----~-~~~~~~sDIwSlG~il~eLltG~~Pf~ 895 (998)
....+...+|||.|.|||+|. + +.|+..+|.||+|+++|||++|..||+
T Consensus 229 --------------------------G~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFY 282 (1317)
T KOG0612|consen 229 --------------------------GTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFY 282 (1317)
T ss_pred --------------------------CcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcch
Confidence 123456679999999999994 2 568889999999999999999999999
Q ss_pred CCChHHHHHHHHhC--CCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhhhcCCCCCCCCC
Q 001902 896 GKTRQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAP 973 (998)
Q Consensus 896 ~~~~~~~~~~i~~~--~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p 973 (998)
..+-.+.|-+|+.- .+.||....+|.++++||.++++ +|..|++ +.++.++.+||||.+++|..++...||..|-.
T Consensus 283 adslveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLg-rngiedik~HpFF~g~~W~~iR~~~pP~vPev 360 (1317)
T KOG0612|consen 283 ADSLVETYGKIMNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLG-RNGIEDIKNHPFFEGIDWDNIRESVPPVVPEV 360 (1317)
T ss_pred HHHHHHHHHHHhchhhhcCCCcccccCHHHHHHHHHHhc-Chhhhcc-cccHHHHHhCccccCCChhhhhhcCCCCCCcC
Confidence 99999999999965 78899778899999999999999 8899998 67799999999999999999999999988655
Q ss_pred CCCCccc
Q 001902 974 LFATDTE 980 (998)
Q Consensus 974 ~~~~~~~ 980 (998)
.-.+|+-
T Consensus 361 ssd~DTs 367 (1317)
T KOG0612|consen 361 SSDDDTS 367 (1317)
T ss_pred CCCCccc
Confidence 5444443
No 28
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=3.9e-43 Score=396.13 Aligned_cols=262 Identities=43% Similarity=0.780 Sum_probs=229.0
Q ss_pred cccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEecCCCC
Q 001902 671 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 750 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~gg 750 (998)
+.||+|+||.||+|.+..+|+.||+|++++...........+..|+.+++.++||||+++++++...+.+|+||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 36899999999999999999999999998765545555667888999999999999999999999999999999999999
Q ss_pred chhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcchh
Q 001902 751 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 830 (998)
Q Consensus 751 sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 830 (998)
+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~---------- 148 (323)
T cd05571 81 ELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD---------- 148 (323)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC----------
Confidence 999998764 45899999999999999999999999999999999999999999999999998532100
Q ss_pred hhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCC
Q 001902 831 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 910 (998)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~~~ 910 (998)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..+....
T Consensus 149 -----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~ 211 (323)
T cd05571 149 -----------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE 211 (323)
T ss_pred -----------------CCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC
Confidence 011234579999999999999999999999999999999999999999988888888777776
Q ss_pred CCCCCCCCCcHHHHHHHHHccccCccCcCCChh-cHHHHHcCCCccCCChhhhh
Q 001902 911 LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVR 963 (998)
Q Consensus 911 ~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~-~a~elL~Hp~f~~~~~~~~~ 963 (998)
..+|. ..+.++.+||.+||..||.+||+..+ .+.++++||||++++|..+.
T Consensus 212 ~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~~~~~~ 263 (323)
T cd05571 212 IRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASINWQDVV 263 (323)
T ss_pred CCCCC--CCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHH
Confidence 66654 46889999999999999999993221 29999999999999998774
No 29
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=7.2e-43 Score=400.43 Aligned_cols=294 Identities=37% Similarity=0.652 Sum_probs=235.7
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++++.||+|+||.||+|.+..+++.||+|++.+...........+..|+.++..++|+||+++++.+.+...+|+||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 47999999999999999999999999999999998765444555667888999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
|||+||+|.+++.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++..........
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~ 158 (363)
T cd05628 81 EFLPGGDMMTLLMKK--DTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTE 158 (363)
T ss_pred cCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccc
Confidence 999999999999765 459999999999999999999999999999999999999999999999999986543211100
Q ss_pred CCcc-hhhhhcccC--CCCc-----ccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCC
Q 001902 825 LPTT-NEKKRRHKG--QQNP-----VFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 896 (998)
Q Consensus 825 ~~~~-~~~~~~~~~--~~~~-----~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~ 896 (998)
.... ......... .... .............+||+.|+|||++.+..++.++|||||||++|+|++|..||.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~ 238 (363)
T cd05628 159 FYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (363)
T ss_pred ccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence 0000 000000000 0000 0000001112356899999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHhC--CCCCCCCCCCcHHHHHHHHHccccCccCc---CCChhcHHHHHcCCCccCCChhhhhcC
Q 001902 897 KTRQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSR---LGSHEGANEIKKHPFFKGVNWALVRCM 965 (998)
Q Consensus 897 ~~~~~~~~~i~~~--~~~~~~~~~~s~~l~~Ll~~~L~~dP~~R---pt~~~~a~elL~Hp~f~~~~~~~~~~~ 965 (998)
.+....+..+... .+.+|.....+.++++||.+|++ +|.+| |+ +++|++||||++++|..+...
T Consensus 239 ~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~----~~ei~~hp~f~~~~~~~~~~~ 307 (363)
T cd05628 239 ETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPG----VEEIKTNPFFEGVDWEHIRER 307 (363)
T ss_pred CCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCC----HHHHhCCCCCCCCCHHHHHhC
Confidence 8888888888763 45566666788999999999876 55554 66 999999999999999988654
No 30
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=5e-43 Score=396.99 Aligned_cols=271 Identities=37% Similarity=0.644 Sum_probs=236.9
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++++.||+|+||.||+|.+..+++.||+|++++...........+.+|+.++..++||||+++++++...+.+||||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999998765444455677889999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||++|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~----- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNL--GVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT----- 153 (333)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc-----
Confidence 999999999999764 4589999999999999999999999999999999999999999999999999854221
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 904 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~ 904 (998)
.....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+.
T Consensus 154 -------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~ 208 (333)
T cd05600 154 -------------------------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWE 208 (333)
T ss_pred -------------------------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHH
Confidence 1234579999999999999999999999999999999999999999988877777
Q ss_pred HHHhCC--CCCCCC----CCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhhhcCCCCCCC
Q 001902 905 NILHKD--LKFPSS----TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELD 971 (998)
Q Consensus 905 ~i~~~~--~~~~~~----~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~ 971 (998)
.+.... +..+.. ..++.++.+||.+||..+|.+||+ +.++++||||+.++|..+....||..+
T Consensus 209 ~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s----~~~ll~h~~~~~~~~~~~~~~~~~~~~ 277 (333)
T cd05600 209 NLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGS----LEDIKNHPFFKEVDWNELRELKPPFVP 277 (333)
T ss_pred HHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCC----HHHHHhCcccCCCCHHHHhhCCCCCCC
Confidence 665432 222222 245889999999999999999999 999999999999999988877776653
No 31
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=4.6e-43 Score=397.87 Aligned_cols=269 Identities=36% Similarity=0.720 Sum_probs=235.1
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCC-eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCe
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSG-QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 739 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~-~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 739 (998)
.+..++|.+.+.||+|+||.||+|.+..++ ..||+|++.+...........+.+|+.+++.++||||+++++++...+.
T Consensus 26 ~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~ 105 (340)
T PTZ00426 26 KMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESY 105 (340)
T ss_pred CCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCE
Confidence 355678999999999999999999976554 7899999986554445556778899999999999999999999999999
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCC
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 819 (998)
+|+||||+++++|.+++.+. ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 106 ~~lv~Ey~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 106 LYLVLEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 99999999999999999775 4589999999999999999999999999999999999999999999999999854320
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCCh
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 899 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~ 899 (998)
......||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+.
T Consensus 184 ------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 233 (340)
T PTZ00426 184 ------------------------------RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP 233 (340)
T ss_pred ------------------------------CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH
Confidence 11235699999999999998899999999999999999999999999888
Q ss_pred HHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCC-hhcHHHHHcCCCccCCChhhhh
Q 001902 900 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNWALVR 963 (998)
Q Consensus 900 ~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~-~~~a~elL~Hp~f~~~~~~~~~ 963 (998)
...+..+..+...+|. ..+..+.+||.+||..||.+|++. .+.+.++++||||++++|....
T Consensus 234 ~~~~~~i~~~~~~~p~--~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~~~~~ 296 (340)
T PTZ00426 234 LLIYQKILEGIIYFPK--FLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDWVSLL 296 (340)
T ss_pred HHHHHHHhcCCCCCCC--CCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHH
Confidence 8888888887766654 367889999999999999999632 1339999999999999998764
No 32
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-43 Score=385.67 Aligned_cols=263 Identities=32% Similarity=0.474 Sum_probs=220.3
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC--eEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT--HVCL 742 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~--~~~l 742 (998)
..+...+.||+|+||.||++.+..+|..+|+|.+... +....+.+.+|+.+|.+++|||||++++...... .++|
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~---~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i 93 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELE---DSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNI 93 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecc---cchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEe
Confidence 4688889999999999999999999999999998765 2222677899999999999999999999755444 6999
Q ss_pred EEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec-CCcEEEEeccCccccCCCC
Q 001902 743 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 743 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~-~g~vkL~DFG~a~~~~~~~ 821 (998)
+|||+++|+|.+++.+.++ .+++..++.+.+||++||+|||++||||+||||+|||++. +|.+||+|||+++.....
T Consensus 94 ~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~- 171 (313)
T KOG0198|consen 94 FMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESK- 171 (313)
T ss_pred eeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccc-
Confidence 9999999999999998765 7999999999999999999999999999999999999999 799999999998654320
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCCCCC-CCh
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRG-KTR 899 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf~~-~~~ 899 (998)
...........||+.|||||++... ...+++|||||||++.||+||+.||.. ...
T Consensus 172 -----------------------~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~ 228 (313)
T KOG0198|consen 172 -----------------------GTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEE 228 (313)
T ss_pred -----------------------cccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcch
Confidence 0111233457899999999999853 344599999999999999999999988 455
Q ss_pred HHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCCh
Q 001902 900 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 959 (998)
Q Consensus 900 ~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 959 (998)
...+..+.......+-...+|.++++||.+||..||.+||| |.+||+|||.+...-
T Consensus 229 ~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpt----a~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 229 AEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPT----AEELLEHPFLKQNSI 284 (313)
T ss_pred HHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhcCcccCcC----HHHHhhChhhhcccc
Confidence 55555555544222333447899999999999999999999 999999999987543
No 33
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.3e-44 Score=363.46 Aligned_cols=270 Identities=31% Similarity=0.531 Sum_probs=234.7
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeeccccc-----ChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeC
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-----NRNKVHRACAEREILDML-DHPFVPALYASFQTK 737 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~-----~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~ 737 (998)
...|...+.||.|..++|.++.++.+|+.+|+|++...... .....+....|+.||+++ .||+|+++.++|+.+
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 35788889999999999999999999999999998643221 122345566799999998 799999999999999
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
..+++|+|.|+.|.|+|+|... -.+++...+.|++||++|+.|||.++||||||||+|||++++.++||+|||+|+.+
T Consensus 96 sF~FlVFdl~prGELFDyLts~--VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l 173 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSK--VTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQL 173 (411)
T ss_pred chhhhhhhhcccchHHHHhhhh--eeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeecc
Confidence 9999999999999999999874 45999999999999999999999999999999999999999999999999999775
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC------CCCCChhHHHHHHHHHHHHHcCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG------AGHTSAVDWWALGILLYEMLYGY 891 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~------~~~~~~sDIwSlG~il~eLltG~ 891 (998)
... ..-...||||+|+|||.+.. .+|+..+|+||+|+|+|-|+.|+
T Consensus 174 ~~G----------------------------ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGc 225 (411)
T KOG0599|consen 174 EPG----------------------------EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGC 225 (411)
T ss_pred CCc----------------------------hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCC
Confidence 411 11235799999999999854 46788999999999999999999
Q ss_pred CCCCCCChHHHHHHHHhCCCCC--CCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhhhcCCC
Q 001902 892 TPFRGKTRQKTFANILHKDLKF--PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNP 967 (998)
Q Consensus 892 ~Pf~~~~~~~~~~~i~~~~~~~--~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~ 967 (998)
+||.+....-++..|+.+...+ |.+...|...++||.+||+.||.+|+| ++++|.||||..+-....+.+.|
T Consensus 226 pPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Rit----ake~LaHpff~q~~~~~~r~msP 299 (411)
T KOG0599|consen 226 PPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRIT----AKEALAHPFFIQIAQQQARQMSP 299 (411)
T ss_pred CchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhccc----HHHHhcChHHHHHHHhcccccCC
Confidence 9999999999999999988765 566788999999999999999999999 99999999998765555554444
No 34
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1e-42 Score=399.46 Aligned_cols=302 Identities=38% Similarity=0.692 Sum_probs=240.7
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++++.||.|+||.||+|.+..+|+.||+|++.+...........+.+|+.++..++||||++++++|...+.+|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 47999999999999999999999999999999998654444555667888999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
|||++++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.++|+|||++..+.......
T Consensus 81 E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (364)
T cd05599 81 EYLPGGDMMTLLMKK--DTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTE 158 (364)
T ss_pred CCCCCcHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccc
Confidence 999999999999764 459999999999999999999999999999999999999999999999999986543211100
Q ss_pred -CCcchhhh----------hcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCC
Q 001902 825 -LPTTNEKK----------RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 893 (998)
Q Consensus 825 -~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~P 893 (998)
........ ......................+||+.|+|||++.+..++.++|||||||++|+|++|.+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~P 238 (364)
T cd05599 159 FYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPP 238 (364)
T ss_pred ccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCC
Confidence 00000000 0000000000000000012245799999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHhC--CCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhhhcCCCCCC
Q 001902 894 FRGKTRQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPEL 970 (998)
Q Consensus 894 f~~~~~~~~~~~i~~~--~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~ 970 (998)
|.+.+....+..+... .+.++.....+..+.+||.+||. +|.+|++. ..+.++++||||++++|..+....+|..
T Consensus 239 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~-~~~~~ll~h~~~~~~~~~~~~~~~~~~~ 315 (364)
T cd05599 239 FCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGN-NGVNEIKSHPFFKGVDWEHIRERPAPII 315 (364)
T ss_pred CCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCC-CCHHHHhcCCCcCCCCHHHHhhcCCCCC
Confidence 9998888877777654 34455555678999999999997 99999974 4599999999999999998876555543
No 35
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.1e-42 Score=385.37 Aligned_cols=272 Identities=34% Similarity=0.573 Sum_probs=226.7
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
.|++.+.||+|+||.||+|.+..+|+.||+|.+.+...........+.+|+.+++.++|+||+++++++...+..|+|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 37889999999999999999999999999999886544444444567789999999999999999999999999999999
Q ss_pred cCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCC
Q 001902 746 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 825 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 825 (998)
|+++++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++......
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----- 155 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG----- 155 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC-----
Confidence 999999998886554456899999999999999999999999999999999999999999999999998543210
Q ss_pred CcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001902 826 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 905 (998)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~ 905 (998)
.......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......
T Consensus 156 -----------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~ 212 (285)
T cd05631 156 -----------------------ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREE 212 (285)
T ss_pred -----------------------CeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHH
Confidence 011234689999999999999999999999999999999999999987654322222
Q ss_pred HHh--CCCCCCCCCCCcHHHHHHHHHccccCccCcCCChh-cHHHHHcCCCccCCChhhhhcC
Q 001902 906 ILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVRCM 965 (998)
Q Consensus 906 i~~--~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~-~a~elL~Hp~f~~~~~~~~~~~ 965 (998)
+.. ...........+.++.+||.+||+.||.+||+..+ .+.++++||||.+++|..+...
T Consensus 213 ~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~~~~~~~ 275 (285)
T cd05631 213 VDRRVKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFKRLEAN 275 (285)
T ss_pred HHHHhhcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCHHHHHhC
Confidence 221 11112223346889999999999999999998553 4899999999999999988544
No 36
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=8.5e-43 Score=401.98 Aligned_cols=300 Identities=36% Similarity=0.684 Sum_probs=239.0
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|.+++.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||++++++|.+.+++|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 37999999999999999999999999999999997654444455677888999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||++|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..........
T Consensus 81 E~~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 158 (377)
T cd05629 81 EFLPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSA 158 (377)
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence 999999999999764 458999999999999999999999999999999999999999999999999986432111000
Q ss_pred -C----Ccchhhhh---cccCCCCcc------------cccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHH
Q 001902 825 -L----PTTNEKKR---RHKGQQNPV------------FMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 884 (998)
Q Consensus 825 -~----~~~~~~~~---~~~~~~~~~------------~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il 884 (998)
. ........ ......... ............+||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 238 (377)
T cd05629 159 YYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIM 238 (377)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhh
Confidence 0 00000000 000000000 000000011246799999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCChHHHHHHHHh--CCCCCCCCCCCcHHHHHHHHHccccCccCcC---CChhcHHHHHcCCCccCCCh
Q 001902 885 YEMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRL---GSHEGANEIKKHPFFKGVNW 959 (998)
Q Consensus 885 ~eLltG~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rp---t~~~~a~elL~Hp~f~~~~~ 959 (998)
|+|++|.+||.+.+....+..+.. ..+.+|.....+.++.+||.+||. +|.+|+ + +.++++||||++++|
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~----~~~~l~hp~~~~~~~ 313 (377)
T cd05629 239 FECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGG----AHEIKSHPFFRGVDW 313 (377)
T ss_pred hhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCC----HHHHhcCCCcCCCCH
Confidence 999999999998888777777765 345556666678999999999998 787765 6 999999999999999
Q ss_pred hhhhcCCCCCCC
Q 001902 960 ALVRCMNPPELD 971 (998)
Q Consensus 960 ~~~~~~~~~~~~ 971 (998)
..++...+|..+
T Consensus 314 ~~~~~~~~~~~~ 325 (377)
T cd05629 314 DTIRQIRAPFIP 325 (377)
T ss_pred HHHccCCCCccc
Confidence 999887777664
No 37
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.3e-43 Score=366.47 Aligned_cols=260 Identities=23% Similarity=0.349 Sum_probs=222.9
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEe--eCCeEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ--TKTHVC 741 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~--~~~~~~ 741 (998)
.+.|+.+++|++|+||.||+|+++.|++.||+|.++.+.-... ..-...+||.+|.+++|||||.+.++.. +-+.+|
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~G-FPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy 153 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEG-FPITSLREINILLKARHPNIVEVKEVVVGSNMDKIY 153 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCC-CcchhHHHHHHHHhcCCCCeeeeEEEEeccccceee
Confidence 5689999999999999999999999999999999987642222 2234567999999999999999999876 446799
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 821 (998)
|||||| ..+|..++...+ .++...+++.++.|+++||+|||++.|+||||||+|+|++..|.+||+|||+|+.++..
T Consensus 154 ~VMe~~-EhDLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp- 230 (419)
T KOG0663|consen 154 IVMEYV-EHDLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSP- 230 (419)
T ss_pred eeHHHH-HhhHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCC-
Confidence 999999 678999998764 56999999999999999999999999999999999999999999999999999876532
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCCCCCCChH
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 900 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~ 900 (998)
....+..+.|.+|.|||.+.+. .|++++|+||+|||+.||+++++.|.|....
T Consensus 231 --------------------------~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~ 284 (419)
T KOG0663|consen 231 --------------------------LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEI 284 (419)
T ss_pred --------------------------cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchH
Confidence 1234567899999999999885 5899999999999999999999999999999
Q ss_pred HHHHHHHhCC-------------------CCCCCC-----------CCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 901 KTFANILHKD-------------------LKFPSS-----------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 901 ~~~~~i~~~~-------------------~~~~~~-----------~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
+++.+|.+.- +.++.. ..++....+|+..+|.+||.+|.| |.+.|+
T Consensus 285 dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~t----A~~~L~ 360 (419)
T KOG0663|consen 285 DQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRIT----AEDGLK 360 (419)
T ss_pred HHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCcccccc----HHHhhc
Confidence 9999887620 111111 114567789999999999999999 999999
Q ss_pred CCCccCC
Q 001902 951 HPFFKGV 957 (998)
Q Consensus 951 Hp~f~~~ 957 (998)
|+||...
T Consensus 361 h~~F~e~ 367 (419)
T KOG0663|consen 361 HEYFRET 367 (419)
T ss_pred ccccccC
Confidence 9999984
No 38
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.4e-42 Score=395.74 Aligned_cols=297 Identities=37% Similarity=0.687 Sum_probs=237.5
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++++.||+|+||.||+|.+..+++.||+|++.+...........+..|+.++..++|+||+++++.+...+.+|+||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999998654445556677888999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
|||+|++|.+++.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.++|+|||++..........
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~ 158 (360)
T cd05627 81 EFLPGGDMMTLLMKK--DTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTE 158 (360)
T ss_pred eCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccc
Confidence 999999999999764 458999999999999999999999999999999999999999999999999986543211100
Q ss_pred CCcc------hhhhhc--ccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCC
Q 001902 825 LPTT------NEKKRR--HKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 896 (998)
Q Consensus 825 ~~~~------~~~~~~--~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~ 896 (998)
.... ...... ....................+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~ 238 (360)
T cd05627 159 FYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (360)
T ss_pred cccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCC
Confidence 0000 000000 00000000000001122356899999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHhC--CCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhhhcC
Q 001902 897 KTRQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCM 965 (998)
Q Consensus 897 ~~~~~~~~~i~~~--~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~ 965 (998)
.+....+..+... .+.+|.....+.++++||.+|+. ||.+|++. ..+.++++||||++++|..+...
T Consensus 239 ~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~-~~~~ei~~hp~f~~~~~~~~~~~ 307 (360)
T cd05627 239 ETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGS-NGVEEIKSHPFFEGVDWGHIRER 307 (360)
T ss_pred CCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCC-CCHHHHhcCCCCCCCCHHHHhcC
Confidence 8888888877753 34556555678999999999874 99999963 23899999999999999988654
No 39
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=3.5e-42 Score=389.11 Aligned_cols=262 Identities=45% Similarity=0.805 Sum_probs=227.9
Q ss_pred cccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEecCCCC
Q 001902 671 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 750 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~gg 750 (998)
+.||+|+||.||+|.+..+|+.||+|++.+...........+.+|+.+++.++||||+++++++...+.+|+||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46899999999999999999999999998765555556677888999999999999999999999999999999999999
Q ss_pred chhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcchh
Q 001902 751 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 830 (998)
Q Consensus 751 sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 830 (998)
+|..++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~---------- 148 (328)
T cd05593 81 ELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD---------- 148 (328)
T ss_pred CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCc----------
Confidence 999988764 45899999999999999999999999999999999999999999999999998532100
Q ss_pred hhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCC
Q 001902 831 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 910 (998)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~~~ 910 (998)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+....
T Consensus 149 -----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~ 211 (328)
T cd05593 149 -----------------AATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMED 211 (328)
T ss_pred -----------------ccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCC
Confidence 011234579999999999999999999999999999999999999999888877777777666
Q ss_pred CCCCCCCCCcHHHHHHHHHccccCccCcCCCh-hcHHHHHcCCCccCCChhhhh
Q 001902 911 LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVR 963 (998)
Q Consensus 911 ~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~ 963 (998)
..+|. .++.++.+||.+||..||.+|++.. +.+.++++||||.+.+|..+.
T Consensus 212 ~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~~~ 263 (328)
T cd05593 212 IKFPR--TLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNWQDVY 263 (328)
T ss_pred ccCCC--CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHH
Confidence 66554 4688999999999999999998321 129999999999999998764
No 40
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=6e-42 Score=395.37 Aligned_cols=292 Identities=36% Similarity=0.578 Sum_probs=231.8
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
.|++++.||+|+||+||+|.+..+++.||+|++.+...........+..|+.+++.++|+||+++++++.+.+.+|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 68999999999999999999999999999999987655555666788899999999999999999999999999999999
Q ss_pred cCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCC
Q 001902 746 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 825 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 825 (998)
|++||+|.+++.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||++...........
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~ 159 (381)
T cd05626 82 YIPGGDMMSLLIRM--EVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKY 159 (381)
T ss_pred cCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccccc
Confidence 99999999999765 4589999999999999999999999999999999999999999999999999854321110000
Q ss_pred CcchhhhhcccCC-------C-------------CcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHH
Q 001902 826 PTTNEKKRRHKGQ-------Q-------------NPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 885 (998)
Q Consensus 826 ~~~~~~~~~~~~~-------~-------------~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~ 885 (998)
............. . ...............+||+.|+|||++.+..++.++|||||||++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~ 239 (381)
T cd05626 160 YQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILF 239 (381)
T ss_pred ccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHH
Confidence 0000000000000 0 0000000011123568999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCChHHHHHHHHh--CCCCCCCCCCCcHHHHHHHHHcccc--CccCcCCChhcHHHHHcCCCccCCChhh
Q 001902 886 EMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLHR--DPKSRLGSHEGANEIKKHPFFKGVNWAL 961 (998)
Q Consensus 886 eLltG~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~s~~l~~Ll~~~L~~--dP~~Rpt~~~~a~elL~Hp~f~~~~~~~ 961 (998)
+|++|..||...+.......+.. ....++....++.++.+||.+||+. +|..|++ +.++++||||+.++|..
T Consensus 240 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~----~~~~l~hp~f~~~~~~~ 315 (381)
T cd05626 240 EMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNG----ADDIKAHPFFSEVDFSS 315 (381)
T ss_pred HHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCC----HHHHhcCcccCCCChhH
Confidence 99999999998887776666664 3455666667899999999996654 5555999 99999999999999976
Q ss_pred hh
Q 001902 962 VR 963 (998)
Q Consensus 962 ~~ 963 (998)
..
T Consensus 316 ~~ 317 (381)
T cd05626 316 DI 317 (381)
T ss_pred Hh
Confidence 53
No 41
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=5e-42 Score=385.15 Aligned_cols=259 Identities=42% Similarity=0.754 Sum_probs=227.3
Q ss_pred cCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEecCCCCch
Q 001902 673 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 752 (998)
Q Consensus 673 LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ggsL 752 (998)
||+|+||.||+|.+..+++.||+|++.+...........+..|+.++++++||||+++++++...+..|+||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 79999999999999999999999999865444555667788899999999999999999999999999999999999999
Q ss_pred hHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcchhhh
Q 001902 753 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 832 (998)
Q Consensus 753 ~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 832 (998)
.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++......
T Consensus 81 ~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~------------ 146 (312)
T cd05585 81 FHHLQRE--GRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD------------ 146 (312)
T ss_pred HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccC------------
Confidence 9999764 45899999999999999999999999999999999999999999999999998532100
Q ss_pred hcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCC
Q 001902 833 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLK 912 (998)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~~~~~ 912 (998)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..+......
T Consensus 147 ---------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~ 211 (312)
T cd05585 147 ---------------DDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLR 211 (312)
T ss_pred ---------------CCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCC
Confidence 01123457999999999999999999999999999999999999999998888888888877666
Q ss_pred CCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhhh
Q 001902 913 FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVR 963 (998)
Q Consensus 913 ~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~ 963 (998)
++. ..+..+.+||.+||..||.+||++. .+.++|+||||...+|..+.
T Consensus 212 ~~~--~~~~~~~~li~~~L~~dp~~R~~~~-~~~e~l~hp~~~~~~~~~~~ 259 (312)
T cd05585 212 FPD--GFDRDAKDLLIGLLSRDPTRRLGYN-GAQEIKNHPFFSQLSWKKLL 259 (312)
T ss_pred CCC--cCCHHHHHHHHHHcCCCHHHcCCCC-CHHHHHcCCCcCCCCHHHHH
Confidence 554 4688999999999999999998642 28999999999999987663
No 42
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=3.2e-42 Score=397.14 Aligned_cols=299 Identities=37% Similarity=0.634 Sum_probs=235.1
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++++.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++|+||+++++.+..++.+|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 37999999999999999999999999999999997654444445567888999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
|||++++|.+++.+. +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..........
T Consensus 81 E~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~ 158 (376)
T cd05598 81 DYIPGGDMMSLLIRL--GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 158 (376)
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccc
Confidence 999999999999774 458999999999999999999999999999999999999999999999999985432111000
Q ss_pred CCcchhhhhccc-------CCCC---------cccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHH
Q 001902 825 LPTTNEKKRRHK-------GQQN---------PVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML 888 (998)
Q Consensus 825 ~~~~~~~~~~~~-------~~~~---------~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLl 888 (998)
........+... .... ..............+||+.|+|||++.+..++.++|||||||++|+|+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell 238 (376)
T cd05598 159 YYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 238 (376)
T ss_pred ccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehh
Confidence 000000000000 0000 000000011223568999999999999999999999999999999999
Q ss_pred cCCCCCCCCChHHHHHHHHhC--CCCCCCCCCCcHHHHHHHHHccccCccCcC---CChhcHHHHHcCCCccCCChhhh-
Q 001902 889 YGYTPFRGKTRQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRL---GSHEGANEIKKHPFFKGVNWALV- 962 (998)
Q Consensus 889 tG~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rp---t~~~~a~elL~Hp~f~~~~~~~~- 962 (998)
+|..||.+.+..+....+... ....+....++..+.+||.+|+. +|.+|+ + +.++++||||++++|..+
T Consensus 239 ~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~~-~p~~R~~~~t----~~ell~h~~~~~~~~~~~~ 313 (376)
T cd05598 239 VGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLCC-GAEDRLGKNG----ADEIKAHPFFKGIDFASLI 313 (376)
T ss_pred hCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCC----HHHHhCCCCcCCCCHHHHh
Confidence 999999998877766666543 33444555678999999999874 999999 7 999999999999999877
Q ss_pred hcCCCCCC
Q 001902 963 RCMNPPEL 970 (998)
Q Consensus 963 ~~~~~~~~ 970 (998)
....+|..
T Consensus 314 ~~~~~~~~ 321 (376)
T cd05598 314 RRQKAPYI 321 (376)
T ss_pred hcCCCCCC
Confidence 44444443
No 43
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=5.5e-42 Score=386.71 Aligned_cols=262 Identities=41% Similarity=0.783 Sum_probs=227.8
Q ss_pred cccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEecCCCC
Q 001902 671 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 750 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~gg 750 (998)
+.||+|+||.||++.+..+|+.||+|++.+...........+..|+.+++.++||||++++++|...+.+|+||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46899999999999999999999999998765545555667788999999999999999999999999999999999999
Q ss_pred chhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcchh
Q 001902 751 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 830 (998)
Q Consensus 751 sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 830 (998)
+|..++.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~---------- 148 (323)
T cd05595 81 ELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---------- 148 (323)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCC----------
Confidence 999988764 45899999999999999999999999999999999999999999999999987432100
Q ss_pred hhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCC
Q 001902 831 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 910 (998)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~~~ 910 (998)
........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..+....
T Consensus 149 -----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~ 211 (323)
T cd05595 149 -----------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE 211 (323)
T ss_pred -----------------CCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC
Confidence 011124579999999999999999999999999999999999999999988888888877776
Q ss_pred CCCCCCCCCcHHHHHHHHHccccCccCcCCCh-hcHHHHHcCCCccCCChhhhh
Q 001902 911 LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVR 963 (998)
Q Consensus 911 ~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~ 963 (998)
..+|. .++.++.+||.+||..||.+|++.. ..+.++++||||.+.+|....
T Consensus 212 ~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~~~~~~ 263 (323)
T cd05595 212 IRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVV 263 (323)
T ss_pred CCCCC--CCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCCHHHHH
Confidence 66654 4688999999999999999998322 129999999999999998764
No 44
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=4.1e-42 Score=394.83 Aligned_cols=269 Identities=36% Similarity=0.632 Sum_probs=232.7
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
.+..++|++++.||+|+||.||+|.+..+++.||+|++.+...........+..|+.+++.++||||+++++++.+.+.+
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~ 118 (370)
T cd05596 39 RMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYL 118 (370)
T ss_pred CCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 35567999999999999999999999999999999999865444444556677899999999999999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
|+||||++||+|.+++... .+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~ 195 (370)
T cd05596 119 YMVMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDAN 195 (370)
T ss_pred EEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCC
Confidence 9999999999999998653 4889999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC----CCCChhHHHHHHHHHHHHHcCCCCCCC
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA----GHTSAVDWWALGILLYEMLYGYTPFRG 896 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~----~~~~~sDIwSlG~il~eLltG~~Pf~~ 896 (998)
. .......+||+.|+|||++.+. .++.++|||||||++|+|++|.+||.+
T Consensus 196 ~--------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~ 249 (370)
T cd05596 196 G--------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 249 (370)
T ss_pred C--------------------------cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCC
Confidence 0 0112345799999999998654 378899999999999999999999999
Q ss_pred CChHHHHHHHHhCC--CCCCCCCCCcHHHHHHHHHccccCccC--cCCChhcHHHHHcCCCccCCChhhh
Q 001902 897 KTRQKTFANILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKS--RLGSHEGANEIKKHPFFKGVNWALV 962 (998)
Q Consensus 897 ~~~~~~~~~i~~~~--~~~~~~~~~s~~l~~Ll~~~L~~dP~~--Rpt~~~~a~elL~Hp~f~~~~~~~~ 962 (998)
.+....+..+.... +.+|.....|.++.+||.+||..+|.+ |++ +.++++||||+..+|...
T Consensus 250 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s----~~ell~h~~~~~~~~~~~ 315 (370)
T cd05596 250 DSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNG----VDEIKSHPFFKNDQWTFD 315 (370)
T ss_pred CCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCC----HHHHhcCcccCCCChhhH
Confidence 88888888887643 556666678999999999999999987 999 999999999999888654
No 45
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=2e-42 Score=391.50 Aligned_cols=274 Identities=38% Similarity=0.679 Sum_probs=237.0
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|.+.+.||+|+||.||+|.+..+|+.||+|++++...........+..|+.+++.++|+||+++++++...+.+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 36999999999999999999999999999999998765544556677888999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||+++++|.+++.+.. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++........
T Consensus 81 e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~-- 157 (330)
T cd05601 81 EYQPGGDLLSLLNRYE-DQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM-- 157 (330)
T ss_pred CCCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCc--
Confidence 9999999999997752 4599999999999999999999999999999999999999999999999999854321100
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhc------CCCCCChhHHHHHHHHHHHHHcCCCCCCCCC
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA------GAGHTSAVDWWALGILLYEMLYGYTPFRGKT 898 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~------~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~ 898 (998)
.......||+.|+|||++. ...++.++|||||||++|+|++|..||...+
T Consensus 158 ------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~ 213 (330)
T cd05601 158 ------------------------VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGT 213 (330)
T ss_pred ------------------------eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCC
Confidence 0112346899999999986 4567789999999999999999999999888
Q ss_pred hHHHHHHHHhCC--CCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhhhcCCCCCC
Q 001902 899 RQKTFANILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPEL 970 (998)
Q Consensus 899 ~~~~~~~i~~~~--~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~ 970 (998)
....+..+.... ..+|.....+..+.+||.+||+ +|.+||+ +.++++||||+.++|..+....||..
T Consensus 214 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t----~~~l~~h~~~~~~~~~~~~~~~~~~~ 282 (330)
T cd05601 214 SAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLG----YEGLCCHPFFSKIDWNNIRNSLPPFV 282 (330)
T ss_pred HHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCC----HHHHhCCCCcCCCCHHHHhhCCCCcc
Confidence 877777776542 4556666678999999999998 9999999 99999999999999999877655544
No 46
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=5.5e-42 Score=386.17 Aligned_cols=262 Identities=38% Similarity=0.744 Sum_probs=227.1
Q ss_pred cccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCeEEEEEecCCC
Q 001902 671 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 749 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~g 749 (998)
+.||+|+||.||+|.++.+++.||+|++.+...........+..|..++..+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 4689999999999999999999999999876544445566777888888877 799999999999999999999999999
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcch
Q 001902 750 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 829 (998)
Q Consensus 750 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 829 (998)
++|.+++.+. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 g~L~~~i~~~--~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~--------- 149 (320)
T cd05590 81 GDLMFHIQKS--RRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN--------- 149 (320)
T ss_pred chHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC---------
Confidence 9999988764 45999999999999999999999999999999999999999999999999997432100
Q ss_pred hhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001902 830 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 909 (998)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~~ 909 (998)
........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~ 211 (320)
T cd05590 150 ------------------GKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND 211 (320)
T ss_pred ------------------CCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC
Confidence 01123457999999999999999999999999999999999999999999888888888877
Q ss_pred CCCCCCCCCCcHHHHHHHHHccccCccCcCCChh--cHHHHHcCCCccCCChhhhh
Q 001902 910 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE--GANEIKKHPFFKGVNWALVR 963 (998)
Q Consensus 910 ~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~--~a~elL~Hp~f~~~~~~~~~ 963 (998)
...++. ..+.++.+||.+||+.||.+||++.+ ...++++||||+.++|..+.
T Consensus 212 ~~~~~~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~~~~~ 265 (320)
T cd05590 212 EVVYPT--WLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDWEKLN 265 (320)
T ss_pred CCCCCC--CCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCHHHHH
Confidence 666554 36889999999999999999999432 23899999999999998773
No 47
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.9e-41 Score=380.98 Aligned_cols=312 Identities=58% Similarity=1.013 Sum_probs=257.7
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++.+.||+|++|.||+|.+..+++.||+|.+.+...........+..|+++++.++|+||+++++.+......|+||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36999999999999999999999999999999998765544456677889999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||+.+++|.+++.......+++..++.++.||+.||+|||+.|++|+||||+||+++.++.++|+|||++..........
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV 160 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence 99999999999987656679999999999999999999999999999999999999999999999999986543221111
Q ss_pred CCcchhhhhcc--cCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001902 825 LPTTNEKKRRH--KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 902 (998)
Q Consensus 825 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~ 902 (998)
........... ....................|+..|+|||++.+..++.++|||||||++|+|++|..||.+.+....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~ 240 (316)
T cd05574 161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDET 240 (316)
T ss_pred ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHH
Confidence 00000000000 0000000001111223456799999999999998899999999999999999999999999888888
Q ss_pred HHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhhhcCCCCCCCCCCCC
Q 001902 903 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFA 976 (998)
Q Consensus 903 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~ 976 (998)
+..+......++.....+..+.+||.+||..||.+||+++..+.++|+||||++.+|+.++-..||..+.|.+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (316)
T cd05574 241 FSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVNWALIRHTTPPIIPRPDDG 314 (316)
T ss_pred HHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCChhhcccCCCCCCCCcccc
Confidence 88887777777666567899999999999999999999999999999999999999999999999999777654
No 48
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=8e-42 Score=394.60 Aligned_cols=293 Identities=38% Similarity=0.635 Sum_probs=233.6
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
.|++++.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++|+||+++++.+...+.+|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 58999999999999999999999999999999987554445566788899999999999999999999999999999999
Q ss_pred cCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCC
Q 001902 746 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 825 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 825 (998)
||++|+|.+++.+. ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++...........
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~ 159 (382)
T cd05625 82 YIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 159 (382)
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccc
Confidence 99999999999765 4589999999999999999999999999999999999999999999999999754321111000
Q ss_pred Ccchhhhh-----cccCCCCc---------------ccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHH
Q 001902 826 PTTNEKKR-----RHKGQQNP---------------VFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 885 (998)
Q Consensus 826 ~~~~~~~~-----~~~~~~~~---------------~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~ 885 (998)
.......+ .......+ .............+||+.|+|||++.+..++.++|||||||++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~ 239 (382)
T cd05625 160 YQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 239 (382)
T ss_pred cccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHH
Confidence 00000000 00000000 00000011123568999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCChHHHHHHHHhC--CCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhh
Q 001902 886 EMLYGYTPFRGKTRQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 962 (998)
Q Consensus 886 eLltG~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~ 962 (998)
+|++|.+||.+.+.......+... ....|.....+.++.+||.+|+ .+|.+|++ ...+.++++||||+.++|...
T Consensus 240 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~-~~~~~ei~~hp~f~~~~~~~~ 316 (382)
T cd05625 240 EMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLG-KNGADEIKAHPFFKTIDFSSD 316 (382)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCC-CCCHHHHhcCCCcCCcChHHH
Confidence 999999999998887777777653 3455555667899999999986 59999997 345899999999999999753
No 49
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=4e-42 Score=392.13 Aligned_cols=300 Identities=41% Similarity=0.720 Sum_probs=243.9
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|.+++.||+|+||.||+|.+..+++.||+|++.+...........+..|+.++..++|+||+++++++.+.+.+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 47999999999999999999999999999999998765544456677888999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||+++++|.+++.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..........
T Consensus 81 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (350)
T cd05573 81 EYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDRE 158 (350)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccc
Confidence 999999999999875 569999999999999999999999999999999999999999999999999986654322100
Q ss_pred CCcchhhhhcc--cCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001902 825 LPTTNEKKRRH--KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 902 (998)
Q Consensus 825 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~ 902 (998)
........... ....................||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~ 238 (350)
T cd05573 159 YYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQET 238 (350)
T ss_pred ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHH
Confidence 00000000000 0000000000011123456799999999999999999999999999999999999999999888888
Q ss_pred HHHHHh--CCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhhhcCCCCCC
Q 001902 903 FANILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPEL 970 (998)
Q Consensus 903 ~~~i~~--~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~ 970 (998)
+..+.. ....+|....++..+.+||.+||. ||.+|++. +.++++||||++++|.......||..
T Consensus 239 ~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s---~~~ll~hp~~~~~~~~~~~~~~~~~~ 304 (350)
T cd05573 239 YNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGS---FEEIKSHPFFKGIDWENLRETKPPFV 304 (350)
T ss_pred HHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCC---HHHHhcCCCcCCCCHHHHhhCCCCcC
Confidence 888877 555666666679999999999998 99999984 78999999999999998876666654
No 50
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1e-41 Score=384.27 Aligned_cols=265 Identities=40% Similarity=0.753 Sum_probs=229.5
Q ss_pred cccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCeEEEEEecCCC
Q 001902 671 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 749 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~g 749 (998)
+.||+|+||.||+|.+..+++.||+|++.+...........+..|..++..+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 4689999999999999999999999999876544555566777899998876 899999999999999999999999999
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcch
Q 001902 750 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 829 (998)
Q Consensus 750 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 829 (998)
++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~--------- 149 (321)
T cd05591 81 GDLMFQIQRS--RKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILN--------- 149 (321)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccC---------
Confidence 9999988764 45899999999999999999999999999999999999999999999999988532100
Q ss_pred hhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001902 830 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 909 (998)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~~ 909 (998)
........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~ 211 (321)
T cd05591 150 ------------------GVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHD 211 (321)
T ss_pred ------------------CccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcC
Confidence 01123456999999999999999999999999999999999999999999988888888887
Q ss_pred CCCCCCCCCCcHHHHHHHHHccccCccCcCCChh---cHHHHHcCCCccCCChhhhhcCC
Q 001902 910 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE---GANEIKKHPFFKGVNWALVRCMN 966 (998)
Q Consensus 910 ~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~---~a~elL~Hp~f~~~~~~~~~~~~ 966 (998)
...+|. ..+.++.+||.+||..||.+||+..+ .+.++++||||..++|..+....
T Consensus 212 ~~~~p~--~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~~~~~~~~~ 269 (321)
T cd05591 212 DVLYPV--WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEIDWVLLEQRK 269 (321)
T ss_pred CCCCCC--CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCCHHHHHhCC
Confidence 766554 36889999999999999999994333 39999999999999999875433
No 51
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=5.6e-42 Score=393.41 Aligned_cols=268 Identities=35% Similarity=0.660 Sum_probs=228.6
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEE
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 741 (998)
+..++|++++.||+|+||.||++.+..+++.||+|++.+...........+..|+.+++.++||||+++++++..++.+|
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLY 119 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence 34578999999999999999999999999999999998654444445566788999999999999999999999999999
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 821 (998)
+|||||++|+|.+++... .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 120 lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~ 196 (370)
T cd05621 120 MVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG 196 (370)
T ss_pred EEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCC
Confidence 999999999999999653 48999999999999999999999999999999999999999999999999985432110
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCC----CCChhHHHHHHHHHHHHHcCCCCCCCC
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALGILLYEMLYGYTPFRGK 897 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~----~~~~sDIwSlG~il~eLltG~~Pf~~~ 897 (998)
.......+||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+.
T Consensus 197 --------------------------~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~ 250 (370)
T cd05621 197 --------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD 250 (370)
T ss_pred --------------------------ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCC
Confidence 01123457999999999997643 678999999999999999999999998
Q ss_pred ChHHHHHHHHhCC--CCCCCCCCCcHHHHHHHHHccccCccC--cCCChhcHHHHHcCCCccCCChhhh
Q 001902 898 TRQKTFANILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKS--RLGSHEGANEIKKHPFFKGVNWALV 962 (998)
Q Consensus 898 ~~~~~~~~i~~~~--~~~~~~~~~s~~l~~Ll~~~L~~dP~~--Rpt~~~~a~elL~Hp~f~~~~~~~~ 962 (998)
+....+..+.... +.+|.....+..+++|+.+||..++.. |++ +.++++||||+..+|...
T Consensus 251 ~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~----~~e~l~hp~~~~~~~~~~ 315 (370)
T cd05621 251 SLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNG----VEEIKQHPFFKNDQWNWD 315 (370)
T ss_pred CHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCC----HHHHhcCcccCCCCcChH
Confidence 8888888887643 556666667899999999999855543 778 999999999999766543
No 52
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=9.9e-42 Score=384.84 Aligned_cols=268 Identities=35% Similarity=0.698 Sum_probs=232.3
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCC-CccceeEEEeeCCeEEEEE
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHP-FVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~-nIv~l~~~~~~~~~~~lV~ 744 (998)
+|++++.||+|+||.||+|.+..+++.||+|++.+...........+..|..++..++|+ +|+.+++++...+.+|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 588999999999999999999999999999999876554555567788899999999764 6888999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~---- 154 (324)
T cd05587 81 EYVNGGDLMYHIQQV--GKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG---- 154 (324)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCC----
Confidence 999999999998764 45899999999999999999999999999999999999999999999999987431100
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 904 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~ 904 (998)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+.
T Consensus 155 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~ 211 (324)
T cd05587 155 -----------------------GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQ 211 (324)
T ss_pred -----------------------CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 011234579999999999999999999999999999999999999999998888888
Q ss_pred HHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCCh-hcHHHHHcCCCccCCChhhhhc
Q 001902 905 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRC 964 (998)
Q Consensus 905 ~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~ 964 (998)
.+......++. ..+.++.+|+.+||..||.+|++.. ....++++||||+.++|..+..
T Consensus 212 ~i~~~~~~~~~--~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~~~~~~~ 270 (324)
T cd05587 212 SIMEHNVSYPK--SLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRIDWEKLER 270 (324)
T ss_pred HHHcCCCCCCC--CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHh
Confidence 88877665554 4688999999999999999999853 3458999999999999987743
No 53
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-43 Score=383.74 Aligned_cols=258 Identities=27% Similarity=0.436 Sum_probs=229.3
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
..|..+..||+|+||.||+|.+..+++.||+|++..+. .......+..|+.+|..++++||.++|+.|..+..++++|
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~--~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiM 90 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE--AEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIM 90 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhh--cchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHH
Confidence 46888899999999999999999999999999998543 4456788899999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
|||.||++.++++.. ..+.+..+..++++++.||.|||..+.+|||||+.|||+..+|.+||+|||.+..+.
T Consensus 91 ey~~gGsv~~lL~~~--~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~------ 162 (467)
T KOG0201|consen 91 EYCGGGSVLDLLKSG--NILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLT------ 162 (467)
T ss_pred HHhcCcchhhhhccC--CCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeee------
Confidence 999999999999763 446888899999999999999999999999999999999999999999999985532
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 904 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~ 904 (998)
.......+++|||.|||||++.+..|+.++||||||++.|||++|.+||...++...+.
T Consensus 163 ---------------------~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlf 221 (467)
T KOG0201|consen 163 ---------------------NTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLF 221 (467)
T ss_pred ---------------------chhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEE
Confidence 12223468899999999999999999999999999999999999999999988866666
Q ss_pred HHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCC
Q 001902 905 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 958 (998)
Q Consensus 905 ~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 958 (998)
.|.+...+.... .+|.-+++|+..||.+||+.||+ |.+||+|+|++...
T Consensus 222 lIpk~~PP~L~~-~~S~~~kEFV~~CL~k~P~~Rps----A~~LLKh~FIk~a~ 270 (467)
T KOG0201|consen 222 LIPKSAPPRLDG-DFSPPFKEFVEACLDKNPEFRPS----AKELLKHKFIKRAK 270 (467)
T ss_pred eccCCCCCcccc-ccCHHHHHHHHHHhhcCcccCcC----HHHHhhhHHHHhcC
Confidence 666655544444 78889999999999999999999 99999999999844
No 54
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.3e-41 Score=383.71 Aligned_cols=262 Identities=42% Similarity=0.752 Sum_probs=226.1
Q ss_pred cccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHH-HHHhCCCCCccceeEEEeeCCeEEEEEecCCC
Q 001902 671 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAERE-ILDMLDHPFVPALYASFQTKTHVCLITDYCPG 749 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~-il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~g 749 (998)
+.||+|+||.||+|.+..+|+.||+|++.+...........+..|.. +++.++||||+++++++...+.+|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46899999999999999999999999998654433344455555655 56789999999999999999999999999999
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcch
Q 001902 750 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 829 (998)
Q Consensus 750 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 829 (998)
++|..++.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~---------- 148 (323)
T cd05575 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIE---------- 148 (323)
T ss_pred CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCccccc----------
Confidence 9999998764 4589999999999999999999999999999999999999999999999998843210
Q ss_pred hhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001902 830 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 909 (998)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~~ 909 (998)
........+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..+...
T Consensus 149 -----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~ 211 (323)
T cd05575 149 -----------------HSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNK 211 (323)
T ss_pred -----------------CCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcC
Confidence 011223457999999999999999999999999999999999999999998888888888876
Q ss_pred CCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhhh
Q 001902 910 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVR 963 (998)
Q Consensus 910 ~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~ 963 (998)
....+. ..+..+.+||.+||+.||.+||+.++.+.++++||||..++|..+.
T Consensus 212 ~~~~~~--~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~~~~~~ 263 (323)
T cd05575 212 PLRLKP--NISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSINWDDLV 263 (323)
T ss_pred CCCCCC--CCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCCHHHHh
Confidence 655443 4588999999999999999999988888999999999999998774
No 55
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.5e-41 Score=383.16 Aligned_cols=268 Identities=36% Similarity=0.693 Sum_probs=233.1
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCeEEEEE
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
+|.+++.||+|+||.||+|.+..+++.||+|++.+..............|..++..+ .|++|+.+++++...+.+|+||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 588999999999999999999999999999999876544444556677788888877 5899999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||+++|+|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~---- 154 (323)
T cd05616 81 EYVNGGDLMYQIQQV--GRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD---- 154 (323)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCC----
Confidence 999999999998764 45899999999999999999999999999999999999999999999999998532100
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 904 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~ 904 (998)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+.
T Consensus 155 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~ 211 (323)
T cd05616 155 -----------------------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ 211 (323)
T ss_pred -----------------------CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHH
Confidence 011234579999999999999999999999999999999999999999998888888
Q ss_pred HHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCCh-hcHHHHHcCCCccCCChhhhhc
Q 001902 905 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRC 964 (998)
Q Consensus 905 ~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~ 964 (998)
.+......+|. ..+.++.+|+.+||+.||.+|++.. +...++++||||+.++|..+..
T Consensus 212 ~i~~~~~~~p~--~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~~~~~~~ 270 (323)
T cd05616 212 SIMEHNVAYPK--SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLER 270 (323)
T ss_pred HHHhCCCCCCC--cCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCCHHHHHh
Confidence 88887766664 4688999999999999999999854 3468999999999999988753
No 56
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.8e-41 Score=382.77 Aligned_cols=264 Identities=41% Similarity=0.781 Sum_probs=228.4
Q ss_pred cccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHH---HhCCCCCccceeEEEeeCCeEEEE
Q 001902 667 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREIL---DMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 667 y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il---~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
|++++.||+|+||.||+|.+..+++.||+|++++...........+..|+.++ +.++||||+++++++...+.+|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 77899999999999999999999999999999876444444556677776665 456899999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
|||+++++|..++.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~--- 154 (324)
T cd05589 81 MEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF--- 154 (324)
T ss_pred EcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCC---
Confidence 999999999988754 35899999999999999999999999999999999999999999999999987432100
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 903 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~ 903 (998)
.......+|++.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+
T Consensus 155 ------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~ 210 (324)
T cd05589 155 ------------------------GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVF 210 (324)
T ss_pred ------------------------CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 01123467999999999999999999999999999999999999999998888888
Q ss_pred HHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChh-cHHHHHcCCCccCCChhhh
Q 001902 904 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALV 962 (998)
Q Consensus 904 ~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~-~a~elL~Hp~f~~~~~~~~ 962 (998)
..+......+|. .++..+.+||.+||..||.+||++.+ .+.++++||||+.++|..+
T Consensus 211 ~~i~~~~~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~~~~~ 268 (324)
T cd05589 211 DSIVNDEVRYPR--FLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINWDDL 268 (324)
T ss_pred HHHHhCCCCCCC--CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCCHHHH
Confidence 888877666554 46888999999999999999996554 4999999999999999876
No 57
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-42 Score=364.76 Aligned_cols=265 Identities=27% Similarity=0.399 Sum_probs=224.8
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEee-----CCe
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-----KTH 739 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~-----~~~ 739 (998)
..|..++.||.|+||.|+.+.++.+|+.||+|.+... .......++..+|+.+|+.++|+||+.+++.+.. -+.
T Consensus 22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~-F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D 100 (359)
T KOG0660|consen 22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNP-FENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND 100 (359)
T ss_pred ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhh-hhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence 4566689999999999999999999999999988743 3455667888999999999999999999999865 468
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCC
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 819 (998)
+|+|+|+| +.+|..+++.+ ..+++.+++.+++||+.||+|+|+.||+||||||+|+|++.+..+||+|||+|+....
T Consensus 101 vYiV~elM-etDL~~iik~~--~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~ 177 (359)
T KOG0660|consen 101 VYLVFELM-ETDLHQIIKSQ--QDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDK 177 (359)
T ss_pred eEEehhHH-hhHHHHHHHcC--ccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccc
Confidence 99999999 88999999875 4499999999999999999999999999999999999999999999999999976542
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCCCC
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKT 898 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~~~ 898 (998)
. ......+.++.|.+|.|||.+.. ..|+...||||+|||+.||++|++.|.|.+
T Consensus 178 ~-------------------------~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d 232 (359)
T KOG0660|consen 178 F-------------------------FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKD 232 (359)
T ss_pred c-------------------------CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCc
Confidence 2 01122356789999999999754 679999999999999999999999999988
Q ss_pred hHHHHHHHHhCC-----------------------CCCC------CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHH
Q 001902 899 RQKTFANILHKD-----------------------LKFP------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 949 (998)
Q Consensus 899 ~~~~~~~i~~~~-----------------------~~~~------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL 949 (998)
...++..|+.-. ...| .....++.+.+||.+||..||.+|+| ++++|
T Consensus 233 ~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRit----a~eAL 308 (359)
T KOG0660|consen 233 YVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRIT----AEEAL 308 (359)
T ss_pred hHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCC----HHHHh
Confidence 887777665411 1111 11346778999999999999999999 99999
Q ss_pred cCCCccCCChhhh
Q 001902 950 KHPFFKGVNWALV 962 (998)
Q Consensus 950 ~Hp~f~~~~~~~~ 962 (998)
.||||..+.-..-
T Consensus 309 ~hPYl~~~hdp~d 321 (359)
T KOG0660|consen 309 AHPYLAPYHDPED 321 (359)
T ss_pred cChhhhhhcCCcc
Confidence 9999998654433
No 58
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.2e-41 Score=384.41 Aligned_cols=262 Identities=43% Similarity=0.791 Sum_probs=226.4
Q ss_pred cccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEecCCCC
Q 001902 671 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 750 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~gg 750 (998)
+.||+|+||.||+|.+..+|+.||+|++.+...........+..|+.++..++||||+++++++...+.+|+||||++++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 36899999999999999999999999998765545555667788999999999999999999999999999999999999
Q ss_pred chhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcch
Q 001902 751 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 829 (998)
Q Consensus 751 sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 829 (998)
+|..++.+. ..+++..++.++.||+.||.|||+ +||+||||||+|||++.+|.+||+|||++......
T Consensus 81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~--------- 149 (325)
T cd05594 81 ELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--------- 149 (325)
T ss_pred cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCC---------
Confidence 999988764 458999999999999999999997 79999999999999999999999999998432100
Q ss_pred hhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001902 830 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 909 (998)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~~ 909 (998)
........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~ 211 (325)
T cd05594 150 ------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME 211 (325)
T ss_pred ------------------CcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcC
Confidence 01122456999999999999999999999999999999999999999998887777777776
Q ss_pred CCCCCCCCCCcHHHHHHHHHccccCccCcCCCh-hcHHHHHcCCCccCCChhhhh
Q 001902 910 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVR 963 (998)
Q Consensus 910 ~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~ 963 (998)
...+|. .++.++.+||.+||..||.+|++.. +.+.++++||||+++.|....
T Consensus 212 ~~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~~~ 264 (325)
T cd05594 212 EIRFPR--TLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVWQDVY 264 (325)
T ss_pred CCCCCC--CCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCCHHHHH
Confidence 666554 3688999999999999999998321 129999999999999998663
No 59
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2.8e-41 Score=381.93 Aligned_cols=264 Identities=38% Similarity=0.748 Sum_probs=223.2
Q ss_pred cccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCeEEEEEecCCC
Q 001902 671 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 749 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~g 749 (998)
+.||+|+||.||+|.+..+++.||+|++++...........+..|..++..+ +||||+++++++...+.+|+|||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 4689999999999999999999999999876555555667788899999998 799999999999999999999999999
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcch
Q 001902 750 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 829 (998)
Q Consensus 750 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 829 (998)
++|.+++.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~---------- 148 (329)
T cd05588 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIR---------- 148 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCcccccccc----------
Confidence 9999988764 4599999999999999999999999999999999999999999999999999843110
Q ss_pred hhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCC---------hH
Q 001902 830 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT---------RQ 900 (998)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~---------~~ 900 (998)
........+||+.|+|||++.+..++.++|||||||++|+|++|+.||.... ..
T Consensus 149 -----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~ 211 (329)
T cd05588 149 -----------------PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTED 211 (329)
T ss_pred -----------------CCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchH
Confidence 0011234579999999999999999999999999999999999999996311 12
Q ss_pred HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCCh--hcHHHHHcCCCccCCChhhhhcC
Q 001902 901 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH--EGANEIKKHPFFKGVNWALVRCM 965 (998)
Q Consensus 901 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~--~~a~elL~Hp~f~~~~~~~~~~~ 965 (998)
.....+......+|. .++..+.+||.+||+.||.+|++.. ..+.++++||||..++|..+...
T Consensus 212 ~~~~~~~~~~~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~~~~~~~~ 276 (329)
T cd05588 212 YLFQVILEKQIRIPR--SLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDWDLLEQK 276 (329)
T ss_pred HHHHHHHcCCCCCCC--CCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCCCHHHHHhC
Confidence 234445555555543 4688899999999999999999854 23789999999999999887543
No 60
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=4.7e-41 Score=379.09 Aligned_cols=268 Identities=36% Similarity=0.696 Sum_probs=232.1
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCccceeEEEeeCCeEEEEE
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lV~ 744 (998)
+|...+.||+|+||.||+|.+..+|+.||+|++.+...........+..|..++..+. |++|+++++++...+.+|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4788899999999999999999999999999998764444455567778899998885 577888999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 Ey~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~---- 154 (323)
T cd05615 81 EYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD---- 154 (323)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCC----
Confidence 999999999998764 45999999999999999999999999999999999999999999999999998532100
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 904 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~ 904 (998)
........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+.
T Consensus 155 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~ 211 (323)
T cd05615 155 -----------------------GVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQ 211 (323)
T ss_pred -----------------------CccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 011224569999999999999999999999999999999999999999998888888
Q ss_pred HHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCCh-hcHHHHHcCCCccCCChhhhhc
Q 001902 905 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRC 964 (998)
Q Consensus 905 ~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~ 964 (998)
.+......+|. ..+..+.+|+.+||..+|.+|++.. +...++++||||+.++|..+..
T Consensus 212 ~i~~~~~~~p~--~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~~~~~~~ 270 (323)
T cd05615 212 SIMEHNVSYPK--SLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDWDKLEN 270 (323)
T ss_pred HHHhCCCCCCc--cCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCCHHHHhc
Confidence 88887766654 3678899999999999999999865 3578999999999999987744
No 61
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-41 Score=382.40 Aligned_cols=259 Identities=33% Similarity=0.559 Sum_probs=235.9
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCccceeEEEeeCCeEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCL 742 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~l 742 (998)
...|++.+.||.|.||.||+|.++.+|+.+|+|++.+...........+.+|+.||+++. |||||.++++|.+.+.+++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 467999999999999999999999999999999999887766666788999999999998 9999999999999999999
Q ss_pred EEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecC----CcEEEEeccCccccC
Q 001902 743 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN----GHVSLTDFDLSCLTS 818 (998)
Q Consensus 743 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~----g~vkL~DFG~a~~~~ 818 (998)
|||+|.||.|++.+... .+++..+..++.|++.++.|||+.||+||||||+|+|+... +.+|++|||+|....
T Consensus 114 vmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~ 190 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIK 190 (382)
T ss_pred EEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEcc
Confidence 99999999999999876 39999999999999999999999999999999999999743 579999999996543
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 898 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~ 898 (998)
. .......+||+.|+|||++....|+..+||||+|+++|.|++|.+||.+.+
T Consensus 191 ~----------------------------~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~ 242 (382)
T KOG0032|consen 191 P----------------------------GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGET 242 (382)
T ss_pred C----------------------------CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCC
Confidence 1 123456799999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCCCCC--CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 899 RQKTFANILHKDLKFP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 899 ~~~~~~~i~~~~~~~~--~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
.......+..+++.++ .+..+|..+++|+..||..||.+|+| +.++|+|||++..
T Consensus 243 ~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~t----a~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 243 EFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLT----AAQALQHPWIKSI 299 (382)
T ss_pred hhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCC----HHHHhcCccccCC
Confidence 9999999998877554 45677999999999999999999999 9999999998875
No 62
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.4e-42 Score=365.71 Aligned_cols=255 Identities=30% Similarity=0.555 Sum_probs=233.5
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
..+|++.+.||+|.||.|-+|.+...|+.||||.++++.+.+..+.-.+.+||+||..|+||||+++|++|++.+.++||
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
|||.-+|.|++|+... +.|++..++.+++||+.|+.|+|+++++|||||.+|||+|.++++||.|||++..+...
T Consensus 132 MEYaS~GeLYDYiSer--~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~--- 206 (668)
T KOG0611|consen 132 MEYASGGELYDYISER--GSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADK--- 206 (668)
T ss_pred EEecCCccHHHHHHHh--ccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccc---
Confidence 9999999999999875 56999999999999999999999999999999999999999999999999999654321
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCC-CChhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQKT 902 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~ 902 (998)
..-.++||+|.|.+||.+++.+| .+.+|.||||++||-|++|..||.+.+....
T Consensus 207 -------------------------kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~l 261 (668)
T KOG0611|consen 207 -------------------------KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRL 261 (668)
T ss_pred -------------------------cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHH
Confidence 12347899999999999999988 4689999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCcc
Q 001902 903 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 955 (998)
Q Consensus 903 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 955 (998)
+.+|..+.+.-|.. +..+..||+.||..||++|.| +.+|..|=|..
T Consensus 262 vrQIs~GaYrEP~~---PSdA~gLIRwmLmVNP~RRAT----ieDiAsHWWvN 307 (668)
T KOG0611|consen 262 VRQISRGAYREPET---PSDASGLIRWMLMVNPERRAT----IEDIASHWWVN 307 (668)
T ss_pred HHHhhcccccCCCC---CchHHHHHHHHHhcCcccchh----HHHHhhhheee
Confidence 99999887665544 345678999999999999999 99999997754
No 63
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=4.7e-41 Score=377.89 Aligned_cols=258 Identities=40% Similarity=0.782 Sum_probs=221.8
Q ss_pred cccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCeEEEEEecCCC
Q 001902 671 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 749 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~g 749 (998)
+.||+|+||.||+|.+..+|+.||+|++++..............|..++..+ +||||+++++++...+++|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 4689999999999999999999999999875443334455667788888765 899999999999999999999999999
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcch
Q 001902 750 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 829 (998)
Q Consensus 750 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 829 (998)
++|..++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++.....
T Consensus 81 g~L~~~i~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~---------- 148 (316)
T cd05620 81 GDLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVF---------- 148 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeeccc----------
Confidence 9999998764 4589999999999999999999999999999999999999999999999998743110
Q ss_pred hhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001902 830 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 909 (998)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~~ 909 (998)
........+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..+...
T Consensus 149 -----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~ 211 (316)
T cd05620 149 -----------------GDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD 211 (316)
T ss_pred -----------------CCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence 001123457999999999999999999999999999999999999999988887777777666
Q ss_pred CCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcH-HHHHcCCCccCCChhhhh
Q 001902 910 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGA-NEIKKHPFFKGVNWALVR 963 (998)
Q Consensus 910 ~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a-~elL~Hp~f~~~~~~~~~ 963 (998)
...++. ..+.++.+||.+||..||.+||+ + .++++||||+.++|..+.
T Consensus 212 ~~~~~~--~~~~~~~~li~~~l~~dP~~R~~----~~~~~~~h~~f~~~~~~~~~ 260 (316)
T cd05620 212 TPHYPR--WITKESKDILEKLFERDPTRRLG----VVGNIRGHPFFKTINWTALE 260 (316)
T ss_pred CCCCCC--CCCHHHHHHHHHHccCCHHHcCC----ChHHHHcCCCcCCCCHHHHH
Confidence 555544 36889999999999999999999 5 589999999999998763
No 64
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=3.1e-41 Score=380.95 Aligned_cols=263 Identities=42% Similarity=0.744 Sum_probs=226.6
Q ss_pred cccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHH-HHHhCCCCCccceeEEEeeCCeEEEEEecCCC
Q 001902 671 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAERE-ILDMLDHPFVPALYASFQTKTHVCLITDYCPG 749 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~-il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~g 749 (998)
+.||+|+||.||+|.+..+|+.||+|++.+...........+..|.. +++.++||||+++++++...+..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46899999999999999999999999998654444444455555654 56778999999999999999999999999999
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcch
Q 001902 750 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 829 (998)
Q Consensus 750 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 829 (998)
++|..++.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~--------- 149 (325)
T cd05604 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ--------- 149 (325)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC---------
Confidence 9999888764 45899999999999999999999999999999999999999999999999998432100
Q ss_pred hhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001902 830 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 909 (998)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~~ 909 (998)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||...+....+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~ 211 (325)
T cd05604 150 ------------------SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHK 211 (325)
T ss_pred ------------------CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcC
Confidence 01123457999999999999999999999999999999999999999998888888888776
Q ss_pred CCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhhhc
Q 001902 910 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRC 964 (998)
Q Consensus 910 ~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~ 964 (998)
....+. ..+..+.++|.+||..+|.+||+.++.+.++++||||..++|..+..
T Consensus 212 ~~~~~~--~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~~~~~~~ 264 (325)
T cd05604 212 PLVLRP--GASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLSWTDLEQ 264 (325)
T ss_pred CccCCC--CCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCCCHHHHHh
Confidence 654433 46888999999999999999999888899999999999999987754
No 65
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=4.8e-41 Score=377.83 Aligned_cols=261 Identities=41% Similarity=0.809 Sum_probs=222.9
Q ss_pred cccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCeEEEEEecCCC
Q 001902 671 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 749 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~g 749 (998)
+.||+|+||.||+|.+..+++.||+|++++..............|..++..+ +||||+++++++...+.+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 3689999999999999999999999999876544444555666777777654 899999999999999999999999999
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcch
Q 001902 750 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 829 (998)
Q Consensus 750 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 829 (998)
++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~--------- 149 (316)
T cd05592 81 GDLMFHIQSS--GRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNG--------- 149 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCC---------
Confidence 9999998764 45899999999999999999999999999999999999999999999999998542100
Q ss_pred hhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001902 830 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 909 (998)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~~ 909 (998)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~ 211 (316)
T cd05592 150 ------------------EGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILND 211 (316)
T ss_pred ------------------CCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Confidence 01123457999999999999999999999999999999999999999998888877777665
Q ss_pred CCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhhhcC
Q 001902 910 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCM 965 (998)
Q Consensus 910 ~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~ 965 (998)
...++. .++.++.+||.+||..||.+||++ ..++++||||..++|..+...
T Consensus 212 ~~~~~~--~~~~~~~~ll~~~l~~~P~~R~~~---~~~l~~h~~~~~~~~~~~~~~ 262 (316)
T cd05592 212 RPHFPR--WISKEAKDCLSKLFERDPTKRLGV---DGDIRQHPFFRGIDWERLEKR 262 (316)
T ss_pred CCCCCC--CCCHHHHHHHHHHccCCHHHcCCC---hHHHHcCcccCCCCHHHHHhC
Confidence 544443 368889999999999999999982 358899999999999877543
No 66
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=6.2e-41 Score=369.67 Aligned_cols=267 Identities=32% Similarity=0.569 Sum_probs=222.5
Q ss_pred cCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEecCCCCch
Q 001902 673 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 752 (998)
Q Consensus 673 LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ggsL 752 (998)
||+|+||.||++.+..+|+.||+|.+................|+++++.++||||+++++++....+.|+||||++|++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 79999999999999999999999999765443333344556799999999999999999999999999999999999999
Q ss_pred hHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcchhhh
Q 001902 753 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 832 (998)
Q Consensus 753 ~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 832 (998)
.+++.......++...+..++.||+.||+|||++||+||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~------------ 148 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG------------ 148 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCC------------
Confidence 98887655556899999999999999999999999999999999999999999999999998543210
Q ss_pred hcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCCh----HHHHHHHHh
Q 001902 833 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR----QKTFANILH 908 (998)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~----~~~~~~i~~ 908 (998)
.......|++.|+|||++.+..++.++|||||||++|+|++|..||..... .........
T Consensus 149 ----------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~ 212 (277)
T cd05607 149 ----------------KTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLE 212 (277)
T ss_pred ----------------ceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhc
Confidence 011234689999999999998899999999999999999999999976433 223333333
Q ss_pred CCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhhhcCCCC
Q 001902 909 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPP 968 (998)
Q Consensus 909 ~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~ 968 (998)
..+..+ ....+.++.+||.+||+.||.+||++++.+.++++||||+.++|..+..-..|
T Consensus 213 ~~~~~~-~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~~~~~~~~~~~ 271 (277)
T cd05607 213 DEVKFE-HQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINFPRLEAGLIP 271 (277)
T ss_pred cccccc-cccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCCHHHHhcCcCC
Confidence 333332 23468899999999999999999998888899999999999999888654333
No 67
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=6.8e-41 Score=376.55 Aligned_cols=260 Identities=38% Similarity=0.771 Sum_probs=222.2
Q ss_pred cccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCeEEEEEecCCC
Q 001902 671 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 749 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~g 749 (998)
+.||+|+||.||+|.+..+++.||+|++++..............|..++..+ +||||+++++++.+.+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 4689999999999999999999999999876443334445666788888764 999999999999999999999999999
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcch
Q 001902 750 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 829 (998)
Q Consensus 750 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 829 (998)
++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~--------- 149 (316)
T cd05619 81 GDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLG--------- 149 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCC---------
Confidence 9999999764 45899999999999999999999999999999999999999999999999988432100
Q ss_pred hhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001902 830 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 909 (998)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~~ 909 (998)
........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~ 211 (316)
T cd05619 150 ------------------DAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMD 211 (316)
T ss_pred ------------------CCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence 01122456999999999999999999999999999999999999999998887777777665
Q ss_pred CCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHH-HHHcCCCccCCChhhhhcC
Q 001902 910 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN-EIKKHPFFKGVNWALVRCM 965 (998)
Q Consensus 910 ~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~-elL~Hp~f~~~~~~~~~~~ 965 (998)
...++. ..+.++.+||.+||+.||.+||+ +. ++++||||+.++|..+...
T Consensus 212 ~~~~~~--~~~~~~~~li~~~l~~~P~~R~~----~~~~l~~h~~~~~~~~~~~~~~ 262 (316)
T cd05619 212 NPCYPR--WLTREAKDILVKLFVREPERRLG----VKGDIRQHPFFREIDWSALEER 262 (316)
T ss_pred CCCCCc--cCCHHHHHHHHHHhccCHhhcCC----ChHHHHcCcccCCCCHHHHHhC
Confidence 544443 36788999999999999999999 64 8999999999999877443
No 68
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=4.9e-41 Score=385.90 Aligned_cols=276 Identities=36% Similarity=0.653 Sum_probs=231.7
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
.+..++|++++.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++...+.+
T Consensus 39 ~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (371)
T cd05622 39 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL 118 (371)
T ss_pred CcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEE
Confidence 45568999999999999999999999999999999999764444444556678899999999999999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
|+||||++|++|.+++... .+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 119 ~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~ 195 (371)
T cd05622 119 YMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE 195 (371)
T ss_pred EEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcC
Confidence 9999999999999998653 4899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCC----CCChhHHHHHHHHHHHHHcCCCCCCC
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALGILLYEMLYGYTPFRG 896 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~----~~~~sDIwSlG~il~eLltG~~Pf~~ 896 (998)
. .......+||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+
T Consensus 196 ~--------------------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 249 (371)
T cd05622 196 G--------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 249 (371)
T ss_pred C--------------------------cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCC
Confidence 0 01123457999999999997643 77899999999999999999999999
Q ss_pred CChHHHHHHHHhCC--CCCCCCCCCcHHHHHHHHHccccCccC---cCCChhcHHHHHcCCCccCCChh--hhhcCCCCC
Q 001902 897 KTRQKTFANILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKS---RLGSHEGANEIKKHPFFKGVNWA--LVRCMNPPE 969 (998)
Q Consensus 897 ~~~~~~~~~i~~~~--~~~~~~~~~s~~l~~Ll~~~L~~dP~~---Rpt~~~~a~elL~Hp~f~~~~~~--~~~~~~~~~ 969 (998)
.+....+..+.... +.+|.....+..+++||.+||. +|.. |++ +.++++||||++.+|. .++...+|.
T Consensus 250 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~-~~~~r~~r~~----~~ei~~h~~~~~~~~~~~~~~~~~~~~ 324 (371)
T cd05622 250 DSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLT-DREVRLGRNG----VEEIKRHLFFKNDQWAWETLRDTVAPV 324 (371)
T ss_pred CCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcC-ChhhhcCCCC----HHHHhcCcccCCCChhHHhcCCCCCCC
Confidence 88888888887643 5566666789999999999998 5554 556 9999999999996664 444444443
Q ss_pred C
Q 001902 970 L 970 (998)
Q Consensus 970 ~ 970 (998)
.
T Consensus 325 ~ 325 (371)
T cd05622 325 V 325 (371)
T ss_pred C
Confidence 3
No 69
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-41 Score=377.62 Aligned_cols=259 Identities=28% Similarity=0.435 Sum_probs=220.5
Q ss_pred cccccCCcccccccCCCCceeEEEEEEccCCeE-EEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQY-FAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 738 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~-valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 738 (998)
..+...++.+.+.||.|+||+||++.+. |.. +|+|++......... ...+.+|+.+|.+++|||||++++++....
T Consensus 36 ~~i~~~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~HpNIV~f~G~~~~~~ 112 (362)
T KOG0192|consen 36 EEIDPDELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDES-RKAFRREASLLSRLRHPNIVQFYGACTSPP 112 (362)
T ss_pred eecChHHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHH-HHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 3455667777888999999999999984 445 999999876544443 778999999999999999999999999887
Q ss_pred -eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCCCcEEEecCC-cEEEEeccCcc
Q 001902 739 -HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG-IIYRDLKPENVLLQGNG-HVSLTDFDLSC 815 (998)
Q Consensus 739 -~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~-IiHrDLkP~NILi~~~g-~vkL~DFG~a~ 815 (998)
..+|||||+++|+|..++.+.....++...+..++.||++||.|||+++ ||||||||+|||++.++ ++||+|||+++
T Consensus 113 ~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr 192 (362)
T KOG0192|consen 113 GSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSR 192 (362)
T ss_pred CceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccce
Confidence 7999999999999999998744467999999999999999999999999 99999999999999998 99999999996
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhc--CCCCCChhHHHHHHHHHHHHHcCCCC
Q 001902 816 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA--GAGHTSAVDWWALGILLYEMLYGYTP 893 (998)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~--~~~~~~~sDIwSlG~il~eLltG~~P 893 (998)
...... ...+...||+.|||||++. ...|+.++||||||+++|||+||+.|
T Consensus 193 ~~~~~~---------------------------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~P 245 (362)
T KOG0192|consen 193 EKVISK---------------------------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIP 245 (362)
T ss_pred eecccc---------------------------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCC
Confidence 543110 1223368999999999999 56999999999999999999999999
Q ss_pred CCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHH
Q 001902 894 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 948 (998)
Q Consensus 894 f~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~el 948 (998)
|.+.........+.......+....++..+..|+..||..||..||++.+++..+
T Consensus 246 f~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l 300 (362)
T KOG0192|consen 246 FEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRL 300 (362)
T ss_pred CCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHH
Confidence 9999886666666655544444444788999999999999999999988765443
No 70
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=6.9e-41 Score=376.92 Aligned_cols=262 Identities=40% Similarity=0.772 Sum_probs=226.5
Q ss_pred cccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCeEEEEEecCCC
Q 001902 671 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 749 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~g 749 (998)
+.||+|+||.||+|.+..+++.||+|++++...........+..|+.++..+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4689999999999999999999999999876554555567778899999888 799999999999999999999999999
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcch
Q 001902 750 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 829 (998)
Q Consensus 750 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 829 (998)
++|..++.+. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--------- 149 (318)
T cd05570 81 GDLMFHIQRS--GRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG--------- 149 (318)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcC---------
Confidence 9999988765 45999999999999999999999999999999999999999999999999988431100
Q ss_pred hhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001902 830 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 909 (998)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~~ 909 (998)
.......+|++.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..+...
T Consensus 150 ------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~ 211 (318)
T cd05570 150 ------------------GVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILED 211 (318)
T ss_pred ------------------CCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC
Confidence 01122356999999999999999999999999999999999999999988888887777776
Q ss_pred CCCCCCCCCCcHHHHHHHHHccccCccCcCCCh-hcHHHHHcCCCccCCChhhhh
Q 001902 910 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVR 963 (998)
Q Consensus 910 ~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~ 963 (998)
...++. ..+..+.+||.+||..||.+||++. ..+.+++.||||+.++|....
T Consensus 212 ~~~~~~--~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~~~~~~ 264 (318)
T cd05570 212 EVRYPR--WLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREIDWDKLE 264 (318)
T ss_pred CCCCCC--cCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHH
Confidence 665553 4688999999999999999999931 123999999999999997664
No 71
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=6.8e-41 Score=370.92 Aligned_cols=270 Identities=34% Similarity=0.599 Sum_probs=224.9
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
.|++.+.||+|+||.||++.+..+++.||+|++.............+.+|+.+++.++|+||+++++++...+.+|+|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 48899999999999999999998999999999986544444444567789999999999999999999999999999999
Q ss_pred cCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCC
Q 001902 746 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 825 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 825 (998)
|+++++|.+++.......+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~----- 155 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG----- 155 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCC-----
Confidence 999999998887654456999999999999999999999999999999999999999999999999998543210
Q ss_pred CcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001902 826 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 905 (998)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~ 905 (998)
......+|++.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......
T Consensus 156 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~ 212 (285)
T cd05605 156 -----------------------ETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREE 212 (285)
T ss_pred -----------------------CccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHH
Confidence 011234689999999999988899999999999999999999999988665433322
Q ss_pred HH----hCCCCCCCCCCCcHHHHHHHHHccccCccCcCCCh-hcHHHHHcCCCccCCChhhhhcC
Q 001902 906 IL----HKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCM 965 (998)
Q Consensus 906 i~----~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~ 965 (998)
+. .....+ ....+..+.+|+.+||..||.+||++. +.+.++++||||...+|..+...
T Consensus 213 ~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 275 (285)
T cd05605 213 VERRVKEDQEEY--SEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFKRLEAG 275 (285)
T ss_pred HHHHhhhccccc--CcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCCHHHHhhC
Confidence 22 222222 234688899999999999999999322 12999999999999999877443
No 72
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=9.3e-41 Score=368.84 Aligned_cols=263 Identities=33% Similarity=0.604 Sum_probs=219.0
Q ss_pred cCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEecCCCCch
Q 001902 673 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 752 (998)
Q Consensus 673 LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ggsL 752 (998)
||+|+||+||++.+..+++.||+|.+.+...........+..|+.+++.++|+||+++++++...+..|+||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 79999999999999999999999999865444444556678899999999999999999999999999999999999999
Q ss_pred hHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcchh
Q 001902 753 FLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 830 (998)
Q Consensus 753 ~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 830 (998)
.+++... ....+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~--------- 151 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ--------- 151 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCC---------
Confidence 8887432 23468999999999999999999999999999999999999999999999999985432110
Q ss_pred hhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChH----HHHHHH
Q 001902 831 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ----KTFANI 906 (998)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~----~~~~~i 906 (998)
.......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... .....+
T Consensus 152 ------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 213 (280)
T cd05608 152 ------------------SKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRI 213 (280)
T ss_pred ------------------ccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhh
Confidence 0112346899999999999999999999999999999999999999765432 222233
Q ss_pred HhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChh-cHHHHHcCCCccCCChhhhhc
Q 001902 907 LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVRC 964 (998)
Q Consensus 907 ~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~-~a~elL~Hp~f~~~~~~~~~~ 964 (998)
......++ ...+..+.+|+.+||+.||.+||++.+ .++++++||||+.+.|..+..
T Consensus 214 ~~~~~~~~--~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~ 270 (280)
T cd05608 214 LNDSVTYP--DKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNWRQLEA 270 (280)
T ss_pred cccCCCCc--ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCCHhHHhh
Confidence 33322222 346889999999999999999996553 499999999999999987744
No 73
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.2e-40 Score=377.03 Aligned_cols=274 Identities=38% Similarity=0.671 Sum_probs=229.1
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++++.||+|+||.||++.+..+++.||+|++.+...........+..|+.++..++|+||+.+++++...+++|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 47999999999999999999999999999999998654444455667888999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||++|++|.+++.+. ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 81 e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--- 156 (331)
T cd05597 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG--- 156 (331)
T ss_pred ecCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCC---
Confidence 999999999999764 2458999999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-----CCCCChhHHHHHHHHHHHHHcCCCCCCCCCh
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 899 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~ 899 (998)
........||+.|+|||++.. ..++.++|||||||++|+|++|+.||.+.+.
T Consensus 157 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~ 213 (331)
T cd05597 157 -----------------------TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL 213 (331)
T ss_pred -----------------------CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH
Confidence 001123469999999999963 4567899999999999999999999998887
Q ss_pred HHHHHHHHhCC--CCCCCC-CCCcHHHHHHHHHccccCccC--cCCChhcHHHHHcCCCccCCChhhhhcCCCCC
Q 001902 900 QKTFANILHKD--LKFPSS-TPTSLHAKQLMYRLLHRDPKS--RLGSHEGANEIKKHPFFKGVNWALVRCMNPPE 969 (998)
Q Consensus 900 ~~~~~~i~~~~--~~~~~~-~~~s~~l~~Ll~~~L~~dP~~--Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~ 969 (998)
.+.+..+.... ..++.. ...+..+++||.+||+.++.. |++ +.++++||||.+.+|..+....+|.
T Consensus 214 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~----~~~~l~hp~~~~~~~~~~~~~~~~~ 284 (331)
T cd05597 214 VETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNG----LQDFKDHPFFEGIDWDNIRNSTAPY 284 (331)
T ss_pred HHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCC----HHHHhcCCCCCCCCHHHHhhCCCCc
Confidence 77777776543 223322 346889999999999754433 667 9999999999999999887766653
No 74
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.1e-40 Score=377.17 Aligned_cols=262 Identities=39% Similarity=0.748 Sum_probs=220.9
Q ss_pred cccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCeEEEEEecCCC
Q 001902 671 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 749 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~g 749 (998)
+.||+|+||.||+|.+..+++.||+|++++...........+..|+.++.++ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 4689999999999999999999999999876555555667788899988877 899999999999999999999999999
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcch
Q 001902 750 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 829 (998)
Q Consensus 750 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 829 (998)
++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~--------- 149 (329)
T cd05618 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP--------- 149 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCC---------
Confidence 9999888764 45999999999999999999999999999999999999999999999999998432100
Q ss_pred hhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCC---------ChH
Q 001902 830 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK---------TRQ 900 (998)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~---------~~~ 900 (998)
........||+.|+|||++.+..++.++|||||||++|+|++|..||... ...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~ 211 (329)
T cd05618 150 ------------------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED 211 (329)
T ss_pred ------------------CCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHH
Confidence 01123457999999999999999999999999999999999999999521 112
Q ss_pred HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCCh--hcHHHHHcCCCccCCChhhhh
Q 001902 901 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH--EGANEIKKHPFFKGVNWALVR 963 (998)
Q Consensus 901 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~--~~a~elL~Hp~f~~~~~~~~~ 963 (998)
.....+......+|. ..+..+.+||.+||..||.+||+.. ..+.++++||||+.++|..+.
T Consensus 212 ~~~~~i~~~~~~~p~--~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~~~~~~ 274 (329)
T cd05618 212 YLFQVILEKQIRIPR--SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDLME 274 (329)
T ss_pred HHHHHHhcCCCCCCC--CCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCCHHHHH
Confidence 234445555555553 4678899999999999999999853 236899999999999998664
No 75
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-42 Score=369.70 Aligned_cols=285 Identities=36% Similarity=0.634 Sum_probs=248.1
Q ss_pred cccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCe
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 739 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 739 (998)
.++..+.|..-+.||+||||.||-|.-+.||+.||+|.+.+..+..+.......+|..||.+++.++||.+-..|++.+.
T Consensus 180 qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~ 259 (591)
T KOG0986|consen 180 QPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDA 259 (591)
T ss_pred hhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCc
Confidence 45667889999999999999999999999999999999988777666677778899999999999999999999999999
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCC
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 819 (998)
+|+||..|+||+|.-.|-..+...+++..++.|+.+|+.||.+||..+||+|||||+|||+|+.|+|+|+|+|+|+.+..
T Consensus 260 LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~ 339 (591)
T KOG0986|consen 260 LCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPE 339 (591)
T ss_pred eEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCC
Confidence 99999999999999888877667799999999999999999999999999999999999999999999999999976541
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCCh
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 899 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~ 899 (998)
. ......+||.+|||||++.+..|+...|.|||||+||+|+.|+.||.....
T Consensus 340 g----------------------------~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~Ke 391 (591)
T KOG0986|consen 340 G----------------------------KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKE 391 (591)
T ss_pred C----------------------------CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhh
Confidence 1 122334899999999999999999999999999999999999999976443
Q ss_pred H----HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCCh-hcHHHHHcCCCccCCChhhh--hcCCCCCCCC
Q 001902 900 Q----KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALV--RCMNPPELDA 972 (998)
Q Consensus 900 ~----~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~--~~~~~~~~~~ 972 (998)
. +.-..+......++ ...|.++++|...+|++||.+|+..+ +.+.++.+||||+.++|..+ ..+.||..|-
T Consensus 392 Kvk~eEvdrr~~~~~~ey~--~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~rleagml~PPfiPd 469 (591)
T KOG0986|consen 392 KVKREEVDRRTLEDPEEYS--DKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRRLEAGMLEPPFIPD 469 (591)
T ss_pred hhhHHHHHHHHhcchhhcc--cccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHhHHhccCCCCCCCCC
Confidence 2 33334444455555 56799999999999999999999998 78999999999999999987 4566666554
Q ss_pred CC
Q 001902 973 PL 974 (998)
Q Consensus 973 p~ 974 (998)
|.
T Consensus 470 p~ 471 (591)
T KOG0986|consen 470 PG 471 (591)
T ss_pred cc
Confidence 43
No 76
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.1e-40 Score=376.48 Aligned_cols=262 Identities=40% Similarity=0.716 Sum_probs=224.3
Q ss_pred cccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHH-HHHHhCCCCCccceeEEEeeCCeEEEEEecCCC
Q 001902 671 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAER-EILDMLDHPFVPALYASFQTKTHVCLITDYCPG 749 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~-~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~g 749 (998)
+.||+|+||.||+|.+..+++.||+|++.+...........+..|. .+++.++|+||+++++++...+.+|+||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 4689999999999999999999999999865433333333444444 456788999999999999999999999999999
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcch
Q 001902 750 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 829 (998)
Q Consensus 750 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 829 (998)
++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~L~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~--------- 149 (325)
T cd05602 81 GELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH--------- 149 (325)
T ss_pred CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccC---------
Confidence 9999999764 45889999999999999999999999999999999999999999999999998532100
Q ss_pred hhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001902 830 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 909 (998)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~~ 909 (998)
.......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+....+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~ 211 (325)
T cd05602 150 ------------------NGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK 211 (325)
T ss_pred ------------------CCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhC
Confidence 01123457999999999999999999999999999999999999999998888888888776
Q ss_pred CCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhhh
Q 001902 910 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVR 963 (998)
Q Consensus 910 ~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~ 963 (998)
...++ ...+..+.++|.+||+.||.+|++..+.+.++++|+||..++|..+.
T Consensus 212 ~~~~~--~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~~~~~~~ 263 (325)
T cd05602 212 PLQLK--PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPINWDDLI 263 (325)
T ss_pred CcCCC--CCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCCCHHHHH
Confidence 55443 34688999999999999999999988888999999999999998774
No 77
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.2e-40 Score=375.89 Aligned_cols=263 Identities=45% Similarity=0.802 Sum_probs=223.9
Q ss_pred ccccCCCCceeEEEEEEc---cCCeEEEEEEeeccccc-ChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 670 IKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVML-NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 670 ~~~LG~G~~g~Vy~a~~~---~~~~~valK~i~~~~~~-~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
++.||+|+||.||+|.+. .+++.||+|++++.... .......+..|+.+++.++||||+++++++..++.+|+|||
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence 367999999999999874 46899999999864322 22334567789999999999999999999999999999999
Q ss_pred cCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCC
Q 001902 746 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 825 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 825 (998)
|+++++|.+++.+. +.+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 81 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----- 153 (323)
T cd05584 81 YLSGGELFMHLERE--GIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE----- 153 (323)
T ss_pred CCCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccC-----
Confidence 99999999999765 45889999999999999999999999999999999999999999999999998432100
Q ss_pred CcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001902 826 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 905 (998)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~ 905 (998)
........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..
T Consensus 154 ----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~ 211 (323)
T cd05584 154 ----------------------GTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDK 211 (323)
T ss_pred ----------------------CCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 0112235799999999999998899999999999999999999999999888888888
Q ss_pred HHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCCh-hcHHHHHcCCCccCCChhhhh
Q 001902 906 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVR 963 (998)
Q Consensus 906 i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~ 963 (998)
+......++. ..+..+.+||.+||..||.+||+.. ..+.++++||||+...|..+.
T Consensus 212 ~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~~~~~~~ 268 (323)
T cd05584 212 ILKGKLNLPP--YLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVNWDDLL 268 (323)
T ss_pred HHcCCCCCCC--CCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCCCHHHHh
Confidence 8877665554 4678899999999999999999322 129999999999999997763
No 78
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=4.1e-41 Score=380.80 Aligned_cols=262 Identities=41% Similarity=0.748 Sum_probs=224.4
Q ss_pred cCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC---CCCCccceeEEEeeCCeEEEEEecCCC
Q 001902 673 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML---DHPFVPALYASFQTKTHVCLITDYCPG 749 (998)
Q Consensus 673 LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l---~h~nIv~l~~~~~~~~~~~lV~E~~~g 749 (998)
||+|+||.||+|.+..+++.||+|++.+..............|..++..+ +||||+.++.++...+.+|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 79999999999999999999999999765443334445556677777665 799999999999999999999999999
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcch
Q 001902 750 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 829 (998)
Q Consensus 750 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 829 (998)
++|..++.+. ..+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||++......
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~--------- 149 (330)
T cd05586 81 GELFWHLQKE--GRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTD--------- 149 (330)
T ss_pred ChHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCC---------
Confidence 9999998764 45899999999999999999999999999999999999999999999999998532100
Q ss_pred hhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHh
Q 001902 830 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH 908 (998)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~ 908 (998)
.......+||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+....+..+..
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~ 211 (330)
T cd05586 150 ------------------NKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAF 211 (330)
T ss_pred ------------------CCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHc
Confidence 0112345799999999999764 478899999999999999999999999888888888877
Q ss_pred CCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhhhc
Q 001902 909 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRC 964 (998)
Q Consensus 909 ~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~ 964 (998)
+...++.. .++..+.+||.+||+.||.+||+..+.+.++++||||...+|..+..
T Consensus 212 ~~~~~~~~-~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~~~~~~~ 266 (330)
T cd05586 212 GKVRFPKN-VLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADIDWDLLSK 266 (330)
T ss_pred CCCCCCCc-cCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCCHHHHHh
Confidence 76666543 36789999999999999999998777799999999999999987743
No 79
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=5.3e-41 Score=358.40 Aligned_cols=262 Identities=27% Similarity=0.452 Sum_probs=222.9
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCC-ccceeEEEeeCC----
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF-VPALYASFQTKT---- 738 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~n-Iv~l~~~~~~~~---- 738 (998)
...|..+++||+|+||+||+|+++.+|+.||+|.+.-.... ........+|+.+++.++|+| |+.+++++...+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~ 88 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRG 88 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccc
Confidence 45688999999999999999999999999999999865321 223345678999999999999 999999998877
Q ss_pred --eEEEEEecCCCCchhHHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCc
Q 001902 739 --HVCLITDYCPGGELFLLLDRQPT--KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 814 (998)
Q Consensus 739 --~~~lV~E~~~ggsL~~~l~~~~~--~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a 814 (998)
.+++||||+ ..+|..++..... ..++...++.+++||+.||+|||+++|+||||||.||||+++|.+||+|||+|
T Consensus 89 ~~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 89 IGKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred cceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchH
Confidence 899999999 8899999987542 35777999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCC
Q 001902 815 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTP 893 (998)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~P 893 (998)
+... .+.+..+..++|.+|.|||++.+. .|+..+||||+|||++||+++++.
T Consensus 168 ra~~---------------------------ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~L 220 (323)
T KOG0594|consen 168 RAFS---------------------------IPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPL 220 (323)
T ss_pred HHhc---------------------------CCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCC
Confidence 6432 123345667899999999999987 789999999999999999999999
Q ss_pred CCCCChHHHHHHHHhC------------------CCCCCCC----------CCCcHHHHHHHHHccccCccCcCCChhcH
Q 001902 894 FRGKTRQKTFANILHK------------------DLKFPSS----------TPTSLHAKQLMYRLLHRDPKSRLGSHEGA 945 (998)
Q Consensus 894 f~~~~~~~~~~~i~~~------------------~~~~~~~----------~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a 945 (998)
|.+.....++.+|.+- ...++.. ...+....+++.+||+.+|.+|.+ +
T Consensus 221 FpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~S----a 296 (323)
T KOG0594|consen 221 FPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRIS----A 296 (323)
T ss_pred CCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcC----H
Confidence 9999998888888762 0111111 112347789999999999999999 9
Q ss_pred HHHHcCCCccCCC
Q 001902 946 NEIKKHPFFKGVN 958 (998)
Q Consensus 946 ~elL~Hp~f~~~~ 958 (998)
+.+|.||||....
T Consensus 297 ~~al~h~yf~~~~ 309 (323)
T KOG0594|consen 297 KGALTHPYFSELP 309 (323)
T ss_pred HHHhcChhhcccc
Confidence 9999999999863
No 80
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.2e-40 Score=376.38 Aligned_cols=273 Identities=37% Similarity=0.689 Sum_probs=226.4
Q ss_pred cccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCeEEEEEecCCC
Q 001902 671 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 749 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~g 749 (998)
+.||+|+||.||+|.+..+++.||+|++++...........+..|+.++.++ +||||+.+++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 4689999999999999999999999999876555555667788899999888 699999999999999999999999999
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcch
Q 001902 750 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 829 (998)
Q Consensus 750 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 829 (998)
++|..++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~--------- 149 (327)
T cd05617 81 GDLMFHMQRQ--RKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP--------- 149 (327)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCC---------
Confidence 9999988764 45999999999999999999999999999999999999999999999999988532100
Q ss_pred hhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCC------C-hHHH
Q 001902 830 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK------T-RQKT 902 (998)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~------~-~~~~ 902 (998)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||... . ....
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~ 211 (327)
T cd05617 150 ------------------GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYL 211 (327)
T ss_pred ------------------CCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHH
Confidence 01123457999999999999999999999999999999999999999532 1 1233
Q ss_pred HHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCCh--hcHHHHHcCCCccCCChhhhhcCCCCCCCCCC
Q 001902 903 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH--EGANEIKKHPFFKGVNWALVRCMNPPELDAPL 974 (998)
Q Consensus 903 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~--~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~ 974 (998)
...+......+|. ..+..+.++|.+||..||.+|++.. ..+.++++||||+.++|..+.....+....|.
T Consensus 212 ~~~~~~~~~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~ 283 (327)
T cd05617 212 FQVILEKPIRIPR--FLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDWDLLEKKQVTPPFKPQ 283 (327)
T ss_pred HHHHHhCCCCCCC--CCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCCHHHHHhCCCCCCccCC
Confidence 3444444444443 4678899999999999999999853 34689999999999999988654444333344
No 81
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.3e-40 Score=375.20 Aligned_cols=262 Identities=43% Similarity=0.760 Sum_probs=224.6
Q ss_pred cccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHH-HHHhCCCCCccceeEEEeeCCeEEEEEecCCC
Q 001902 671 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAERE-ILDMLDHPFVPALYASFQTKTHVCLITDYCPG 749 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~-il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~g 749 (998)
+.||+|+||.||+|.+..+++.||+|++.+...........+..|.. +++.++||||+++++++...+.+|+||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36899999999999999999999999998654433334445555554 67889999999999999999999999999999
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcch
Q 001902 750 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 829 (998)
Q Consensus 750 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 829 (998)
++|...+... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~--------- 149 (321)
T cd05603 81 GELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP--------- 149 (321)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCC---------
Confidence 9999888764 45899999999999999999999999999999999999999999999999987432100
Q ss_pred hhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001902 830 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 909 (998)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~~ 909 (998)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..+...
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~ 211 (321)
T cd05603 150 ------------------EETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHK 211 (321)
T ss_pred ------------------CCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcC
Confidence 01123457999999999999989999999999999999999999999998888888888776
Q ss_pred CCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhhh
Q 001902 910 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVR 963 (998)
Q Consensus 910 ~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~ 963 (998)
...++. ..+..+.++|.+||+.||.+||+....+.++++|+||..++|..+.
T Consensus 212 ~~~~~~--~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (321)
T cd05603 212 PLQLPG--GKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPINWDDLY 263 (321)
T ss_pred CCCCCC--CCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCCCHHHHh
Confidence 655543 4578899999999999999999977778899999999999998764
No 82
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=8.9e-41 Score=378.16 Aligned_cols=278 Identities=37% Similarity=0.656 Sum_probs=232.3
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++++.||+|+||.||++.+..+++.||+|++.+...........+..|+.++..++|+||+++++++...+..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999998644434445566788999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||++||+|.+++.+.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 81 Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-- 157 (331)
T cd05624 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT-- 157 (331)
T ss_pred eCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCc--
Confidence 9999999999997642 4589999999999999999999999999999999999999999999999999854321100
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-----CCCCChhHHHHHHHHHHHHHcCCCCCCCCCh
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 899 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~ 899 (998)
.......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+.
T Consensus 158 ------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~ 213 (331)
T cd05624 158 ------------------------VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL 213 (331)
T ss_pred ------------------------eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH
Confidence 01123569999999999876 4578899999999999999999999999888
Q ss_pred HHHHHHHHhCC--CCCCCC-CCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhhhcCCCCCCC
Q 001902 900 QKTFANILHKD--LKFPSS-TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELD 971 (998)
Q Consensus 900 ~~~~~~i~~~~--~~~~~~-~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~ 971 (998)
...+..+.... +++|.. ..++..+.+||.+||+.++ +|+. ...++++++||||+.++|..++...+|..+
T Consensus 214 ~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~-~~~~-~~~~~~~~~h~~f~~~~~~~~~~~~~~~~p 286 (331)
T cd05624 214 VETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRE-RRLG-QNGIEDFKKHAFFEGIDWENIRNLEAPYIP 286 (331)
T ss_pred HHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCch-hhcC-CCCHHHHhcCCCcCCCCHHHHhhCCCCccC
Confidence 88787777643 333332 3468899999999999655 4432 123999999999999999999888777664
No 83
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-42 Score=363.49 Aligned_cols=284 Identities=36% Similarity=0.682 Sum_probs=254.8
Q ss_pred ccccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeC
Q 001902 659 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK 737 (998)
Q Consensus 659 ~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~ 737 (998)
...+...+|..+..||.|+||.|.++..+++.+.||||+++++++.....++....|.++|... +-|.+++++.+|++-
T Consensus 343 ~d~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTm 422 (683)
T KOG0696|consen 343 RDRIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTM 422 (683)
T ss_pred ccceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhh
Confidence 3456778999999999999999999999999999999999999998888888888999999887 578999999999999
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
+.+|+||||+.||+|.-.++.- +.+.+..+..++..|+-||-|||++|||+||||.+|||++.+|++||.|||+++.-
T Consensus 423 DRLyFVMEyvnGGDLMyhiQQ~--GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEn 500 (683)
T KOG0696|consen 423 DRLYFVMEYVNGGDLMYHIQQV--GKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 500 (683)
T ss_pred hheeeEEEEecCchhhhHHHHh--cccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeeccccccc
Confidence 9999999999999998888764 55889999999999999999999999999999999999999999999999998542
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 897 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~ 897 (998)
. .......+++|||.|+|||.+...+|+..+|.||+|++||||+.|++||.+.
T Consensus 501 i---------------------------~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGe 553 (683)
T KOG0696|consen 501 I---------------------------FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE 553 (683)
T ss_pred c---------------------------cCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCC
Confidence 1 1112456789999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCCh-hcHHHHHcCCCccCCChhhh--hcCCCCCCCCC
Q 001902 898 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALV--RCMNPPELDAP 973 (998)
Q Consensus 898 ~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~--~~~~~~~~~~p 973 (998)
+..+.+..|...+..+|.. +|.++.++.+.+|.+.|.+|+..- +.-.+|..||||+.++|..+ +.+.||..+-+
T Consensus 554 DE~elF~aI~ehnvsyPKs--lSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~E~~eiqPPfkPk~ 630 (683)
T KOG0696|consen 554 DEDELFQAIMEHNVSYPKS--LSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKLERREIQPPFKPKI 630 (683)
T ss_pred CHHHHHHHHHHccCcCccc--ccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHHhhccCCCCCCCcc
Confidence 9999999999999988875 689999999999999999999865 34568999999999999988 45566666443
No 84
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.5e-41 Score=377.85 Aligned_cols=262 Identities=25% Similarity=0.445 Sum_probs=238.3
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCe-EEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH-VCL 742 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~-~~l 742 (998)
++.|.+++++|.|+||.+++++++..++.|++|.+.......+. .+...+|..+++++.|||||.+.+.|..++. +||
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~-r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~I 81 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPE-RRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCI 81 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchh-hHHHHHHHHHHHhccCCCeeeeccchhcCCceEEE
Confidence 56899999999999999999999999999999999876554443 3477889999999999999999999998887 999
Q ss_pred EEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCC
Q 001902 743 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 822 (998)
Q Consensus 743 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 822 (998)
||+||+||+|.+.+.++.+..++++.+..|+.||+.||.|||+++|+|||||+.|||++.++.|+|+|||+|+.+..+.
T Consensus 82 vm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~- 160 (426)
T KOG0589|consen 82 VMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED- 160 (426)
T ss_pred EEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCch-
Confidence 9999999999999999888889999999999999999999999999999999999999999999999999998765221
Q ss_pred CCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001902 823 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 902 (998)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~ 902 (998)
....+++||+.||+||.+.+.+|+.++|||||||++|||++-+++|.+.+-...
T Consensus 161 --------------------------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~L 214 (426)
T KOG0589|consen 161 --------------------------SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSEL 214 (426)
T ss_pred --------------------------hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHH
Confidence 234678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCC
Q 001902 903 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 958 (998)
Q Consensus 903 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 958 (998)
..+|.+.. -.|.....+.+++.+|..||..+|..||+ +.+||.+|.++..-
T Consensus 215 i~ki~~~~-~~Plp~~ys~el~~lv~~~l~~~P~~RPs----a~~LL~~P~l~~~~ 265 (426)
T KOG0589|consen 215 ILKINRGL-YSPLPSMYSSELRSLVKSMLRKNPEHRPS----ALELLRRPHLLRYL 265 (426)
T ss_pred HHHHhhcc-CCCCCccccHHHHHHHHHHhhcCCccCCC----HHHHhhChhhhhHH
Confidence 99998876 34555568999999999999999999999 99999999988643
No 85
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.5e-40 Score=376.56 Aligned_cols=276 Identities=36% Similarity=0.638 Sum_probs=231.0
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++++.||+|+||.||++.+..+++.||+|++.+...........+..|+.++..++|+||+++++++...+.+|+||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 37999999999999999999999999999999997644434444556788999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||+++|+|.+++.+.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 81 ey~~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~--- 156 (332)
T cd05623 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG--- 156 (332)
T ss_pred eccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCC---
Confidence 9999999999997642 458999999999999999999999999999999999999999999999999985422100
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhc-----CCCCCChhHHHHHHHHHHHHHcCCCCCCCCCh
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 899 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~ 899 (998)
.......+||+.|+|||++. ...++.++|||||||++|+|++|+.||.+.+.
T Consensus 157 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~ 213 (332)
T cd05623 157 -----------------------TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL 213 (332)
T ss_pred -----------------------cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH
Confidence 01112347999999999986 34578899999999999999999999999888
Q ss_pred HHHHHHHHhCCC--CCCCC-CCCcHHHHHHHHHccccCccC--cCCChhcHHHHHcCCCccCCChhhhhcCCCCCCC
Q 001902 900 QKTFANILHKDL--KFPSS-TPTSLHAKQLMYRLLHRDPKS--RLGSHEGANEIKKHPFFKGVNWALVRCMNPPELD 971 (998)
Q Consensus 900 ~~~~~~i~~~~~--~~~~~-~~~s~~l~~Ll~~~L~~dP~~--Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~ 971 (998)
...+..+..... .+|.. ..++.++++||.+||+.++.. |++ +.++++||||++++|..+....+|..+
T Consensus 214 ~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~----~~~~~~h~~f~~~~~~~~~~~~~~~~~ 286 (332)
T cd05623 214 VETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNG----IEDFKQHPFFTGIDWDNIRNCEAPYIP 286 (332)
T ss_pred HHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCC----HHHHhCCCCcCCCCHHHHhhCCCCccC
Confidence 888888876542 33332 356889999999999765544 567 999999999999999988766665554
No 86
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-42 Score=379.60 Aligned_cols=260 Identities=27% Similarity=0.438 Sum_probs=228.5
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
+.|.++..||.|+||.||+|.++.++...|-|++.. ........+.-||+||..++||+||++++.|..++.+||+.
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet---kseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwili 108 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET---KSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILI 108 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcc---cchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEE
Confidence 457899999999999999999999998889998863 35667788899999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
|||+||-+..++-.- +..|++.+++.+++|++.||.|||+++|||||||..|||++-+|.++|.|||.+....
T Consensus 109 EFC~GGAVDaimlEL-~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~------ 181 (1187)
T KOG0579|consen 109 EFCGGGAVDAIMLEL-GRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNK------ 181 (1187)
T ss_pred eecCCchHhHHHHHh-ccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccch------
Confidence 999999888877654 4569999999999999999999999999999999999999999999999999984321
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-----CCCCChhHHHHHHHHHHHHHcCCCCCCCCCh
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 899 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~ 899 (998)
.......+++|||+|||||+..+ .+|++++||||||++|.+|..+.+|-...+.
T Consensus 182 ---------------------~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp 240 (1187)
T KOG0579|consen 182 ---------------------STRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP 240 (1187)
T ss_pred ---------------------hHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch
Confidence 01123467899999999999754 5789999999999999999999999999999
Q ss_pred HHHHHHHHhCCCC-CCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCCh
Q 001902 900 QKTFANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 959 (998)
Q Consensus 900 ~~~~~~i~~~~~~-~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 959 (998)
...+-+|.+...+ +......+..+.+||.+||.+||..||+ +.+||+||||+.+.-
T Consensus 241 MRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~----aaqll~Hpfv~~~~S 297 (1187)
T KOG0579|consen 241 MRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPP----AAQLLKHPFVQNAPS 297 (1187)
T ss_pred HHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCC----HHHHhhCcccccCCc
Confidence 9999998887654 3344556788999999999999999999 999999999997643
No 87
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.9e-41 Score=375.51 Aligned_cols=300 Identities=37% Similarity=0.635 Sum_probs=252.8
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEE
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 741 (998)
+...-|..++.||-|+||.|.+++-..|...||+|.+.+..+..+..+.....|..||..-+++-||+||..|++++.+|
T Consensus 626 MdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLY 705 (1034)
T KOG0608|consen 626 MDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLY 705 (1034)
T ss_pred ccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceE
Confidence 44567999999999999999999999999999999999988888888899999999999999999999999999999999
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC-
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK- 820 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~- 820 (998)
+||+|++||++..+|.+. +.++++.+++|+..+..|++++|+.|+|||||||+|||||.+|++||.|||++.-+...
T Consensus 706 FVMdYIPGGDmMSLLIrm--gIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTH 783 (1034)
T KOG0608|consen 706 FVMDYIPGGDMMSLLIRM--GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 783 (1034)
T ss_pred EEEeccCCccHHHHHHHh--ccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceecc
Confidence 999999999999999886 56999999999999999999999999999999999999999999999999998654322
Q ss_pred CCCCCCcchhhhhcccCCCCccccc--------------------ccccccccccCCCCcccchhhcCCCCCChhHHHHH
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMA--------------------EPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWAL 880 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSl 880 (998)
+..++.. .. +..++..... ...-....++||+.|+|||++....|+..+|.||.
T Consensus 784 dskYYq~-gd-----H~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~ 857 (1034)
T KOG0608|consen 784 DSKYYQE-GD-----HHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSV 857 (1034)
T ss_pred ccccccC-CC-----ccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHh
Confidence 2222221 11 1111110000 00112346799999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCChHHHHHHHHh--CCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCC
Q 001902 881 GILLYEMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 958 (998)
Q Consensus 881 G~il~eLltG~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 958 (998)
|+|||+|+.|++||......+...+++. ..+.++....+|.++.+||.++++ +++.|+. +.+++++..||||+++|
T Consensus 858 gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~RLG-kng~d~vKaHpfFkgID 935 (1034)
T KOG0608|consen 858 GVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADSRLG-KNGADQVKAHPFFKGID 935 (1034)
T ss_pred hHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhc-Chhhhhc-ccchhhhhcCccccccc
Confidence 9999999999999998887766666653 346677778899999999999887 8899998 66788999999999999
Q ss_pred hhhhhcCCCCCCC
Q 001902 959 WALVRCMNPPELD 971 (998)
Q Consensus 959 ~~~~~~~~~~~~~ 971 (998)
|+-++....|-.+
T Consensus 936 fsslRkq~ApYIP 948 (1034)
T KOG0608|consen 936 FSSLRKQRAPYIP 948 (1034)
T ss_pred hHhhhhccCCcCc
Confidence 9999887766443
No 88
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.7e-40 Score=367.79 Aligned_cols=257 Identities=26% Similarity=0.377 Sum_probs=212.7
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++.+.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.+++.++||||+++++++...+.+|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE-NEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVF 79 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccc-cccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEE
Confidence 379999999999999999999999999999999976432 2334566788999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||++++.+..+... ...+++..++.++.||+.||.|||+.||+||||||+||+++.++.+||+|||++.......
T Consensus 80 e~~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--- 154 (287)
T cd07848 80 EYVEKNMLELLEEM--PNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS--- 154 (287)
T ss_pred ecCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccc---
Confidence 99988777655433 2458999999999999999999999999999999999999999999999999985532110
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 904 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~ 904 (998)
........|++.|+|||++.+..++.++|||||||++|+|++|++||.+.+......
T Consensus 155 -----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~ 211 (287)
T cd07848 155 -----------------------NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLF 211 (287)
T ss_pred -----------------------cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 011123568999999999999889999999999999999999999998876655444
Q ss_pred HHHhCC-------------------CCCCC-----------CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 905 NILHKD-------------------LKFPS-----------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 905 ~i~~~~-------------------~~~~~-----------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
.+.... ..++. ....|..+.+||.+||+.||.+||| +.++|+||||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s----~~~~l~hp~f 287 (287)
T cd07848 212 TIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYL----TEQCLNHPAF 287 (287)
T ss_pred HHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCC----HHHHhcCCCC
Confidence 333211 01111 0125778999999999999999999 9999999998
No 89
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=2e-40 Score=367.74 Aligned_cols=256 Identities=25% Similarity=0.410 Sum_probs=212.9
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
+++|++++.||.|+||.||+|.+..+++.||+|+++... .......+.+|+.+++.++||||+++++++...+..++|
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEH--EEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLV 81 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccc--cCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEE
Confidence 468999999999999999999999999999999987542 122234567899999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
|||++ ++|.+++... ...++...++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 82 ~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~--- 156 (288)
T cd07871 82 FEYLD-SDLKQYLDNC-GNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVP--- 156 (288)
T ss_pred EeCCC-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCC---
Confidence 99996 5899888654 245889999999999999999999999999999999999999999999999998542210
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 902 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~ 902 (998)
........|++.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.
T Consensus 157 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~ 212 (288)
T cd07871 157 ------------------------TKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEE 212 (288)
T ss_pred ------------------------CccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 011223468999999999876 5688999999999999999999999998877666
Q ss_pred HHHHHhCC-------------------CCCCC---------CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 903 FANILHKD-------------------LKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 903 ~~~i~~~~-------------------~~~~~---------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
+..+.... ..++. ....+.++++||.+||+.||.+||| +.++|+||||
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t----~~~~l~hp~f 288 (288)
T cd07871 213 LHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRIS----AEAALRHSYF 288 (288)
T ss_pred HHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCC----HHHHhcCCCC
Confidence 65554311 00111 1235778999999999999999999 9999999998
No 90
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3.2e-40 Score=373.80 Aligned_cols=268 Identities=44% Similarity=0.790 Sum_probs=220.0
Q ss_pred CcccccccCCCCceeEEEEEEc---cCCeEEEEEEeeccccc-ChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCeE
Q 001902 666 HFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVML-NRNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 740 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~---~~~~~valK~i~~~~~~-~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~ 740 (998)
+|++++.||+|+||.||+|++. .+++.||+|++.+.... .......+..|+.+++.+ +|+||+.+++++...+.+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 4889999999999999999874 47899999999764332 223455677899999999 599999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
|+||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 81 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~ 158 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSE 158 (332)
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCcccccc
Confidence 9999999999999998764 45899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCCCCCCC-
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKT- 898 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf~~~~- 898 (998)
. .......+||+.|+|||++.+. .++.++|||||||++|+|++|..||....
T Consensus 159 ~--------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~ 212 (332)
T cd05614 159 E--------------------------KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGE 212 (332)
T ss_pred C--------------------------CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCC
Confidence 0 0112245799999999999875 47889999999999999999999996432
Q ss_pred ---hHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCCh-hcHHHHHcCCCccCCChhhhh
Q 001902 899 ---RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVR 963 (998)
Q Consensus 899 ---~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~ 963 (998)
.......+......++ ...+..+.+||.+||..||.+||++. +.+.++++||||+..+|..+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~~~ 279 (332)
T cd05614 213 RNTQSEVSRRILKCDPPFP--SFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDWEALA 279 (332)
T ss_pred CCCHHHHHHHHhcCCCCCC--CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHH
Confidence 2333444444444433 34688999999999999999999432 238999999999999997664
No 91
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-41 Score=364.65 Aligned_cols=261 Identities=31% Similarity=0.504 Sum_probs=234.6
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
+-|.+.+.||+|.|+.|.+|++.-+|..||||++.+..+ +......+.+|.++|+.+.|||||++|++......+|||+
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKl-D~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL 96 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKL-DTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL 96 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEeccccc-chhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence 569999999999999999999999999999999998755 3344567888999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEe-cCCcEEEEeccCccccCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-GNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~-~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
|+-++|+|++|+.++.. .++++..++|+.||+.|+.|+|+..+|||||||+||.|- .-|-|||.|||++..+.
T Consensus 97 ELGD~GDl~DyImKHe~-Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~----- 170 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMKHEE-GLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ----- 170 (864)
T ss_pred EecCCchHHHHHHhhhc-cccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCC-----
Confidence 99999999999988754 499999999999999999999999999999999998765 57899999999984432
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCC-ChhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHT-SAVDWWALGILLYEMLYGYTPFRGKTRQKT 902 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~-~~sDIwSlG~il~eLltG~~Pf~~~~~~~~ 902 (998)
+-..-.+.||++.|-|||.+.+..|+ +++||||||+|||-|+||++||...+..+.
T Consensus 171 -----------------------PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET 227 (864)
T KOG4717|consen 171 -----------------------PGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET 227 (864)
T ss_pred -----------------------CcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh
Confidence 11233567999999999999998886 589999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhh
Q 001902 903 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWAL 961 (998)
Q Consensus 903 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~ 961 (998)
+..|+.+.+..|.. +|.++++||..||..||.+|.+ +++|..|+|+++.+-..
T Consensus 228 LTmImDCKYtvPsh--vS~eCrdLI~sMLvRdPkkRAs----lEeI~s~~Wlq~~D~~~ 280 (864)
T KOG4717|consen 228 LTMIMDCKYTVPSH--VSKECRDLIQSMLVRDPKKRAS----LEEIVSTSWLQAGDRGL 280 (864)
T ss_pred hhhhhcccccCchh--hhHHHHHHHHHHHhcCchhhcc----HHHHhccccccCCCCCc
Confidence 99999988777654 6899999999999999999999 99999999999986543
No 92
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=7.9e-40 Score=370.46 Aligned_cols=261 Identities=24% Similarity=0.391 Sum_probs=218.7
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEE
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 741 (998)
+..++|++++.||+|+||.||++.+..++..+|+|++.... .......+.+|+++++.++||||+++++++...+.++
T Consensus 2 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (331)
T cd06649 2 LKDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS 79 (331)
T ss_pred CCcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence 45679999999999999999999999999999999987542 3344567889999999999999999999999999999
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
+||||+++++|.+++... ..+++..+..++.|++.||.|||++ +|+||||||+|||++.++.++|+|||++.....
T Consensus 80 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~- 156 (331)
T cd06649 80 ICMEHMDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID- 156 (331)
T ss_pred EEeecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccc-
Confidence 999999999999999764 3589999999999999999999986 699999999999999999999999998843210
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChH
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 900 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~ 900 (998)
.......|++.|+|||++.+..++.++|||||||++|+|++|+.||...+..
T Consensus 157 ----------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~ 208 (331)
T cd06649 157 ----------------------------SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAK 208 (331)
T ss_pred ----------------------------cccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 0112346999999999999999999999999999999999999999776543
Q ss_pred HHHHHHH----------------------------------------------hCCCCCCCCCCCcHHHHHHHHHccccC
Q 001902 901 KTFANIL----------------------------------------------HKDLKFPSSTPTSLHAKQLMYRLLHRD 934 (998)
Q Consensus 901 ~~~~~i~----------------------------------------------~~~~~~~~~~~~s~~l~~Ll~~~L~~d 934 (998)
+....+. ....+.......+.++++||.+||.+|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~ 288 (331)
T cd06649 209 ELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKN 288 (331)
T ss_pred HHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCC
Confidence 3322111 111111111235778999999999999
Q ss_pred ccCcCCChhcHHHHHcCCCccCCCh
Q 001902 935 PKSRLGSHEGANEIKKHPFFKGVNW 959 (998)
Q Consensus 935 P~~Rpt~~~~a~elL~Hp~f~~~~~ 959 (998)
|++||| +.+|++||||+....
T Consensus 289 P~~Rpt----~~ell~h~~~~~~~~ 309 (331)
T cd06649 289 PAERAD----LKMLMNHTFIKRSEV 309 (331)
T ss_pred cccCCC----HHHHhcChHHhhccc
Confidence 999999 999999999987544
No 93
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.8e-40 Score=373.65 Aligned_cols=263 Identities=43% Similarity=0.779 Sum_probs=226.4
Q ss_pred ccccCCCCceeEEEEEE---ccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEec
Q 001902 670 IKPLGSGDTGSVHLVEL---CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 746 (998)
Q Consensus 670 ~~~LG~G~~g~Vy~a~~---~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~ 746 (998)
++.||+|+||.||++.+ ..+|+.||+|++.+... .......+..|+.++++++||||+++++++...+.+|+||||
T Consensus 1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATL-KVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDF 79 (318)
T ss_pred CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcC
Confidence 36799999999999987 35789999999986532 222345567899999999999999999999999999999999
Q ss_pred CCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCC
Q 001902 747 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 826 (998)
Q Consensus 747 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~ 826 (998)
+++++|.+++.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 80 ~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~------ 151 (318)
T cd05582 80 LRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH------ 151 (318)
T ss_pred CCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCC------
Confidence 9999999999764 45899999999999999999999999999999999999999999999999998542210
Q ss_pred cchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHH
Q 001902 827 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 906 (998)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i 906 (998)
........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+
T Consensus 152 ---------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i 210 (318)
T cd05582 152 ---------------------EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMI 210 (318)
T ss_pred ---------------------CCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHH
Confidence 01122457999999999999988999999999999999999999999998888888888
Q ss_pred HhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChh-cHHHHHcCCCccCCChhhhhc
Q 001902 907 LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVRC 964 (998)
Q Consensus 907 ~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~-~a~elL~Hp~f~~~~~~~~~~ 964 (998)
......+|. .++..+.+||.+||+.||.+||++.+ .+.++++||||+.++|..+..
T Consensus 211 ~~~~~~~p~--~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 267 (318)
T cd05582 211 LKAKLGMPQ--FLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTIDWNKLYR 267 (318)
T ss_pred HcCCCCCCC--CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCCHHHHHh
Confidence 777665553 36889999999999999999999764 488999999999999987744
No 94
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-42 Score=372.50 Aligned_cols=280 Identities=39% Similarity=0.684 Sum_probs=250.5
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
++.+.+++.+..||-|+||.|-++........+|+|++++..+.+..+.+.+..|..||..+++|+||++|-.|.+..++
T Consensus 416 ~v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyv 495 (732)
T KOG0614|consen 416 QVKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYV 495 (732)
T ss_pred ccchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhh
Confidence 34567889999999999999999998666667999999998888888889999999999999999999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
|++||-|-||.|+.+|..+ +.+.+...+.++..+++|++|||++|||+|||||+|+|++.+|.+||.|||+|+.+...
T Consensus 496 YmLmEaClGGElWTiLrdR--g~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g 573 (732)
T KOG0614|consen 496 YMLMEACLGGELWTILRDR--GSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG 573 (732)
T ss_pred hhhHHhhcCchhhhhhhhc--CCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccC
Confidence 9999999999999999875 56999999999999999999999999999999999999999999999999999775421
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChH
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 900 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~ 900 (998)
....++||||.|.|||++.+..++.++|.||||+++|||++|.+||.+.++.
T Consensus 574 ----------------------------~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpm 625 (732)
T KOG0614|consen 574 ----------------------------RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPM 625 (732)
T ss_pred ----------------------------CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchH
Confidence 2346789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCCh-hcHHHHHcCCCccCCChhhh--hcCCCCCC
Q 001902 901 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALV--RCMNPPEL 970 (998)
Q Consensus 901 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~--~~~~~~~~ 970 (998)
..+..|+++--.+.-+..++..+.+||++++..+|.+|+... ..+.+|.+|.||.+++|.-+ +.+.||..
T Consensus 626 ktYn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweglr~~~L~pPi~ 698 (732)
T KOG0614|consen 626 KTYNLILKGIDKIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGLRSRTLPPPII 698 (732)
T ss_pred HHHHHHHhhhhhhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhhhhhccCCCCcc
Confidence 999999987433333345678889999999999999999854 57999999999999999877 44555544
No 95
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=3.8e-40 Score=368.27 Aligned_cols=261 Identities=25% Similarity=0.414 Sum_probs=210.6
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.++|++++.||+|+||.||+|.+..+++.||+|++..... ........+|+.+++.++||||+++++++......|+|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE--EGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLV 81 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc--cccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEE
Confidence 3689999999999999999999999999999999875422 22234567899999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
|||+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 82 ~e~~-~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--- 156 (303)
T cd07869 82 FEYV-HTDLCQYMDKH-PGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVP--- 156 (303)
T ss_pred EECC-CcCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCC---
Confidence 9999 56788777654 245899999999999999999999999999999999999999999999999998532211
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCCCCh-HH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR-QK 901 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~-~~ 901 (998)
........||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+... ..
T Consensus 157 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~ 212 (303)
T cd07869 157 ------------------------SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQD 212 (303)
T ss_pred ------------------------CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHH
Confidence 011123468999999999876 4578899999999999999999999987543 23
Q ss_pred HHHHHHhC--CC---CC------------------C-------CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 902 TFANILHK--DL---KF------------------P-------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 902 ~~~~i~~~--~~---~~------------------~-------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
.+..+... .. .+ + .....+..+.+||.+||+.||.+||| +.++|+|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s----~~~~l~h 288 (303)
T cd07869 213 QLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLS----AQAALSH 288 (303)
T ss_pred HHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccC----HHHHhcC
Confidence 33333210 00 00 0 00123457889999999999999999 9999999
Q ss_pred CCccCCCh
Q 001902 952 PFFKGVNW 959 (998)
Q Consensus 952 p~f~~~~~ 959 (998)
|||+.+.+
T Consensus 289 ~~f~~~~~ 296 (303)
T cd07869 289 EYFSDLPP 296 (303)
T ss_pred cccccCCh
Confidence 99998754
No 96
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.5e-41 Score=367.75 Aligned_cols=261 Identities=26% Similarity=0.434 Sum_probs=215.6
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCe
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 739 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~ 739 (998)
.++...|+++++||+||.+.||+|..- ....||+|.+... ..+......+.+|+.+|.+| +|.+|+++++|-..+++
T Consensus 357 ~Vkg~~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~-~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~ 434 (677)
T KOG0596|consen 357 KVKGREYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLL-EADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGY 434 (677)
T ss_pred EECcchhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHh-hcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCce
Confidence 356788999999999999999999974 4556777665532 34667788999999999999 69999999999999999
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCC
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 819 (998)
+||||||- ..+|..+|.+.. ..++.-.++.|..|||.|+.++|..||||.||||.|+|+. .|.+||+|||+|..+..
T Consensus 435 lYmvmE~G-d~DL~kiL~k~~-~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~ 511 (677)
T KOG0596|consen 435 LYMVMECG-DIDLNKILKKKK-SIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQP 511 (677)
T ss_pred EEEEeecc-cccHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhcccCc
Confidence 99999987 889999998754 3355569999999999999999999999999999999999 78999999999977653
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCC-----------CCChhHHHHHHHHHHHHH
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-----------HTSAVDWWALGILLYEML 888 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-----------~~~~sDIwSlG~il~eLl 888 (998)
+...+ ...+-+||+.||+||.+.... .+.++||||||||||+|+
T Consensus 512 DTTsI-------------------------~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMv 566 (677)
T KOG0596|consen 512 DTTSI-------------------------VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMV 566 (677)
T ss_pred cccce-------------------------eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHH
Confidence 33222 234568999999999996543 456899999999999999
Q ss_pred cCCCCCCCCC-hHHHHHHHHhC--CCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 889 YGYTPFRGKT-RQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 889 tG~~Pf~~~~-~~~~~~~i~~~--~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
+|++||.... ....+..|... .+.||..... .++.++++.||.+||.+||+ +.+||+|||++.
T Consensus 567 YgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~-~~li~~mK~CL~rdPkkR~s----i~eLLqhpFl~~ 632 (677)
T KOG0596|consen 567 YGKTPFGQIINQIAKLHAITDPNHEIEFPDIPEN-DELIDVMKCCLARDPKKRWS----IPELLQHPFLQI 632 (677)
T ss_pred hcCCchHHHHHHHHHHHhhcCCCccccccCCCCc-hHHHHHHHHHHhcCcccCCC----cHHHhcCccccc
Confidence 9999998754 34444555544 3456655433 23999999999999999999 999999999987
No 97
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-42 Score=355.80 Aligned_cols=256 Identities=26% Similarity=0.427 Sum_probs=225.9
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
-|.++.+||+|+||.||+|.++++|+.+|+|.+..+ ...+.+..|+.||.++++++||++|+.|.....+|||||
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVME 108 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVME 108 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehh
Confidence 488999999999999999999999999999987643 356788999999999999999999999999999999999
Q ss_pred cCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCC
Q 001902 746 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 825 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 825 (998)
||..|++.++++-+ .+.+++..+..+++..++||+|||...-||||||..|||++.+|.+||.|||.|..+
T Consensus 109 YCGAGSiSDI~R~R-~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQL-------- 179 (502)
T KOG0574|consen 109 YCGAGSISDIMRAR-RKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQL-------- 179 (502)
T ss_pred hcCCCcHHHHHHHh-cCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchh--------
Confidence 99999999998754 467999999999999999999999999999999999999999999999999998432
Q ss_pred CcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001902 826 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 905 (998)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~ 905 (998)
++.+-..++++|||.|||||++..-.|+.++||||||++..||..|++||....+...+..
T Consensus 180 -------------------TDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFM 240 (502)
T KOG0574|consen 180 -------------------TDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFM 240 (502)
T ss_pred -------------------hhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEe
Confidence 2333456788999999999999999999999999999999999999999998887655544
Q ss_pred HHhCC-CCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCC
Q 001902 906 ILHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 958 (998)
Q Consensus 906 i~~~~-~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 958 (998)
|-... ..|......|.++.+|+++||-++|++|-| +-+|++|||.+...
T Consensus 241 IPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~T----A~~L~~H~FiknA~ 290 (502)
T KOG0574|consen 241 IPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKT----ALRLCEHTFIKNAP 290 (502)
T ss_pred ccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHH----HHHHhhhhhhcCCC
Confidence 43332 223344456889999999999999999999 99999999999843
No 98
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.4e-40 Score=378.19 Aligned_cols=254 Identities=29% Similarity=0.481 Sum_probs=220.4
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-C-----CCccceeEEEeeCCe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-H-----PFVPALYASFQTKTH 739 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~-h-----~nIv~l~~~~~~~~~ 739 (998)
+|.+++.||+|+||+|.+|.+.+|++.||||+++.. .....+...|+.||..|+ | -|||+++++|...++
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~----k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H 262 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK----KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH 262 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC----hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence 799999999999999999999999999999999854 345667788999999996 4 489999999999999
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecC--CcEEEEeccCcccc
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN--GHVSLTDFDLSCLT 817 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~--g~vkL~DFG~a~~~ 817 (998)
+|||+|.+ ..+|+++++.+....++...++.++.||+.||.+||+.||||+||||+|||+..- ..|||+|||.|+..
T Consensus 263 lciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 263 LCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred eeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEeccccccc
Confidence 99999999 8999999999888889999999999999999999999999999999999999853 47999999999764
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 897 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~ 897 (998)
+. ....++-+..|.|||++.|.+|+.+.||||||||++||++|.+.|.|.
T Consensus 342 ~q------------------------------~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 342 SQ------------------------------RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred CC------------------------------cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence 31 111557889999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHhCCC---------------------C-------------------------------CC-CCC-------
Q 001902 898 TRQKTFANILHKDL---------------------K-------------------------------FP-SST------- 917 (998)
Q Consensus 898 ~~~~~~~~i~~~~~---------------------~-------------------------------~~-~~~------- 917 (998)
+..+++..|+.-.- . .| ...
T Consensus 392 ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~ 471 (586)
T KOG0667|consen 392 NEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLP 471 (586)
T ss_pred CHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcc
Confidence 99988888775100 0 01 000
Q ss_pred -CCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCC
Q 001902 918 -PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 958 (998)
Q Consensus 918 -~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 958 (998)
.....+.+||.+||.+||.+|+| ..++|+||||++..
T Consensus 472 ~~~~~~F~dflk~~L~~dP~~R~t----p~qal~Hpfl~~~~ 509 (586)
T KOG0667|consen 472 KADDKLFIDFLKRCLEWDPAERIT----PAQALNHPFLTGTS 509 (586)
T ss_pred cccHHHHHHHHHHHhccCchhcCC----HHHHhcCccccccc
Confidence 11235689999999999999999 99999999999753
No 99
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-41 Score=371.53 Aligned_cols=254 Identities=26% Similarity=0.379 Sum_probs=233.4
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
.|.-++.||.|+||.||-|++..+...||||.+....-...+...++..|+..|++++|||++.+.++|..+...|||||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 48888999999999999999999999999999987766677778899999999999999999999999999999999999
Q ss_pred cCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCC
Q 001902 746 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 825 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 825 (998)
|| -|+-.|++.-. .+++-+-.+..|+.+.+.||+|||+.+.||||||..|||+++.|.|||+|||.|..+.
T Consensus 107 YC-lGSAsDlleVh-kKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~------- 177 (948)
T KOG0577|consen 107 YC-LGSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMA------- 177 (948)
T ss_pred HH-hccHHHHHHHH-hccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcC-------
Confidence 99 78888888765 3569999999999999999999999999999999999999999999999999885532
Q ss_pred CcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC---CCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001902 826 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 902 (998)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~---~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~ 902 (998)
+..+++|||+|||||++.. +.|+-++||||||++..+|.-.++|+...+....
T Consensus 178 ------------------------PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSA 233 (948)
T KOG0577|consen 178 ------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA 233 (948)
T ss_pred ------------------------chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHH
Confidence 4567899999999999854 6788999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 903 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 903 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
+..|.+...+.......|..+.+|+..||++-|.+||| .+++|+|+|...
T Consensus 234 LYHIAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRpt----se~ll~H~fv~R 283 (948)
T KOG0577|consen 234 LYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPT----SEELLKHRFVLR 283 (948)
T ss_pred HHHHHhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCc----HHHHhhcchhcc
Confidence 99999888777667778999999999999999999999 999999999875
No 100
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.9e-39 Score=359.37 Aligned_cols=277 Identities=34% Similarity=0.603 Sum_probs=229.0
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
.|+..+.||.|+||.||++.+..+++.||+|++.............+.+|+.+++.++|+||+.+++.+..++..|+|||
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 37788999999999999999999999999999976544444444567789999999999999999999999999999999
Q ss_pred cCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCC
Q 001902 746 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 825 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 825 (998)
|+++++|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~----- 155 (285)
T cd05632 81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG----- 155 (285)
T ss_pred eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCC-----
Confidence 999999998887654456999999999999999999999999999999999999999999999999988543210
Q ss_pred CcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001902 826 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 905 (998)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~ 905 (998)
.......|++.|+|||++.+..++.++|+|||||++|+|++|..||.+.........
T Consensus 156 -----------------------~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~ 212 (285)
T cd05632 156 -----------------------ESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREE 212 (285)
T ss_pred -----------------------CcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 011234689999999999988999999999999999999999999988765444333
Q ss_pred HHhCC--CCCCCCCCCcHHHHHHHHHccccCccCcCCChh-cHHHHHcCCCccCCChhhh--hcCCCCCC
Q 001902 906 ILHKD--LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALV--RCMNPPEL 970 (998)
Q Consensus 906 i~~~~--~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~-~a~elL~Hp~f~~~~~~~~--~~~~~~~~ 970 (998)
+.... .........+..+.+|+.+||..||.+||++.+ .+.++++|+||+.++|..+ ..+.||-.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 282 (285)
T cd05632 213 VDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFKRLEAGMLDPPFV 282 (285)
T ss_pred HHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCCHHHHhcCcCCCCCC
Confidence 32211 111122346788999999999999999999774 4889999999999999865 44444444
No 101
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.7e-39 Score=359.71 Aligned_cols=277 Identities=35% Similarity=0.618 Sum_probs=227.1
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
.|++.+.||+|+||.||++.+..+++.||+|.+.+...........+.+|+.+++.++|++|+.+++.+...+.+|+|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 37788999999999999999999999999999886544444445567789999999999999999999999999999999
Q ss_pred cCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCC
Q 001902 746 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 825 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 825 (998)
|+++++|.+++.......+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~----- 155 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG----- 155 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCC-----
Confidence 999999999987654456999999999999999999999999999999999999999999999999988442200
Q ss_pred CcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChH---HH
Q 001902 826 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ---KT 902 (998)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~---~~ 902 (998)
.......|+..|+|||++.+..++.++|||||||++|+|++|..||...... ..
T Consensus 156 -----------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~ 212 (285)
T cd05630 156 -----------------------QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREE 212 (285)
T ss_pred -----------------------ccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHH
Confidence 0112346899999999999999999999999999999999999999875432 22
Q ss_pred HHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCCh-hcHHHHHcCCCccCCChhhhhc--CCCCCCC
Q 001902 903 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRC--MNPPELD 971 (998)
Q Consensus 903 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~--~~~~~~~ 971 (998)
...+... .........+..+.+|+.+||+.||.+|||+. ..+.++++||||+.++|..++. .+||..+
T Consensus 213 ~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~ 283 (285)
T cd05630 213 VERLVKE-VQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQINFKRLEAGMLEPPFKP 283 (285)
T ss_pred HHhhhhh-hhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhccCHHHHhcCCCCCCCCC
Confidence 2222221 11112234678899999999999999999843 1378999999999999987754 4454443
No 102
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.3e-39 Score=369.34 Aligned_cols=263 Identities=25% Similarity=0.401 Sum_probs=211.2
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC-----CeE
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-----THV 740 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~-----~~~ 740 (998)
+|++.+.||+|+||.||+|.+..+++.||+|.+.... ........+.+|+.+++.++||||+++++++... ..+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVF-EHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhh-ccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence 5899999999999999999999999999999987432 2233445678899999999999999999987543 358
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
|+||||| +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 80 ~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 156 (338)
T cd07859 80 YVVFELM-ESDLHQVIKAN--DDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 156 (338)
T ss_pred EEEEecC-CCCHHHHHHhc--ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccc
Confidence 9999999 57899988764 35899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC--CCCCChhHHHHHHHHHHHHHcCCCCCCCCC
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKT 898 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~sDIwSlG~il~eLltG~~Pf~~~~ 898 (998)
.. .........||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+
T Consensus 157 ~~------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~ 212 (338)
T cd07859 157 TP------------------------TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKN 212 (338)
T ss_pred cC------------------------ccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCC
Confidence 00 0011234579999999999876 678899999999999999999999998766
Q ss_pred hHHHHHHHHh--------------------------CCCCCC---CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHH
Q 001902 899 RQKTFANILH--------------------------KDLKFP---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 949 (998)
Q Consensus 899 ~~~~~~~i~~--------------------------~~~~~~---~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL 949 (998)
....+..+.. ...+.+ .....+..+.+||.+||+.||++||+ +.++|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~e~l 288 (338)
T cd07859 213 VVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPT----AEEAL 288 (338)
T ss_pred hHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCC----HHHHh
Confidence 5433222111 000100 11235678899999999999999999 99999
Q ss_pred cCCCccCCChh
Q 001902 950 KHPFFKGVNWA 960 (998)
Q Consensus 950 ~Hp~f~~~~~~ 960 (998)
+||||+++...
T Consensus 289 ~hp~f~~~~~~ 299 (338)
T cd07859 289 ADPYFKGLAKV 299 (338)
T ss_pred cCchhhhcCcc
Confidence 99999987554
No 103
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=5.1e-39 Score=356.77 Aligned_cols=265 Identities=45% Similarity=0.816 Sum_probs=232.4
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|.+.+.||.|+||.||++.+..+++.+|+|++.............+.+|++++++++||||+++++++...+.+|+||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 36899999999999999999999999999999998765545556677889999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||+++++|.+++.+. ..+++..+..++.||+.||.|||++||+|+||+|+|||++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~---- 154 (290)
T cd05580 81 EYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR---- 154 (290)
T ss_pred ecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC----
Confidence 999999999999775 45899999999999999999999999999999999999999999999999998543210
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 904 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~ 904 (998)
.....|++.|+|||.+.+..++.++||||||+++|+|++|..||...+......
T Consensus 155 --------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~ 208 (290)
T cd05580 155 --------------------------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYE 208 (290)
T ss_pred --------------------------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 123468999999999988888899999999999999999999999888777777
Q ss_pred HHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCCh-hcHHHHHcCCCccCCChhhhh
Q 001902 905 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVR 963 (998)
Q Consensus 905 ~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~ 963 (998)
.+......++.. .+..+.++|.+||..||.+|++.. +.++++++||||+.++|..+.
T Consensus 209 ~~~~~~~~~~~~--~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~~~ 266 (290)
T cd05580 209 KILEGKVRFPSF--FSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDWIALL 266 (290)
T ss_pred HHhcCCccCCcc--CCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCCHHHHh
Confidence 777666555543 578999999999999999999322 349999999999999998774
No 104
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.5e-39 Score=373.64 Aligned_cols=254 Identities=24% Similarity=0.365 Sum_probs=207.5
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEE
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 741 (998)
+...+|++++.||+|+||.||+|.+..+++.||+|.... ..+.+|+.+++.++||||++++++|......|
T Consensus 89 ~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ 159 (391)
T PHA03212 89 IEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---------GGTATEAHILRAINHPSIIQLKGTFTYNKFTC 159 (391)
T ss_pred cccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeE
Confidence 455789999999999999999999999999999996432 34678999999999999999999999999999
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 821 (998)
+|||++ +++|..++... ..++...++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 160 lv~e~~-~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~ 236 (391)
T PHA03212 160 LILPRY-KTDLYCYLAAK--RNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN 236 (391)
T ss_pred EEEecC-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccccccccc
Confidence 999999 57888888664 358999999999999999999999999999999999999999999999999985321000
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCC---
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT--- 898 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~--- 898 (998)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||....
T Consensus 237 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~ 290 (391)
T PHA03212 237 --------------------------ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLD 290 (391)
T ss_pred --------------------------ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCccccc
Confidence 011234579999999999999999999999999999999999998875432
Q ss_pred ----hHHHHHHHHhC--------------------------CCCCCC-------CCCCcHHHHHHHHHccccCccCcCCC
Q 001902 899 ----RQKTFANILHK--------------------------DLKFPS-------STPTSLHAKQLMYRLLHRDPKSRLGS 941 (998)
Q Consensus 899 ----~~~~~~~i~~~--------------------------~~~~~~-------~~~~s~~l~~Ll~~~L~~dP~~Rpt~ 941 (998)
....+..++.. ....+. ....+.++.+||.+||+.||.+|||
T Consensus 291 ~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpt- 369 (391)
T PHA03212 291 GDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPS- 369 (391)
T ss_pred ccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCC-
Confidence 11122222111 000000 0123557889999999999999999
Q ss_pred hhcHHHHHcCCCccCC
Q 001902 942 HEGANEIKKHPFFKGV 957 (998)
Q Consensus 942 ~~~a~elL~Hp~f~~~ 957 (998)
+.++|+||||+.+
T Consensus 370 ---a~elL~hp~f~~~ 382 (391)
T PHA03212 370 ---AEALLDFAAFQDI 382 (391)
T ss_pred ---HHHHhcChhhccC
Confidence 9999999999874
No 105
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=4.4e-39 Score=364.59 Aligned_cols=259 Identities=24% Similarity=0.400 Sum_probs=216.1
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEE
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 741 (998)
+..++|++.+.||.|+||.||++.+..++..+|+|++.... .......+.+|+++++.++|+||++++++|...+.+|
T Consensus 2 l~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (333)
T cd06650 2 LKDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS 79 (333)
T ss_pred cchhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEE
Confidence 45679999999999999999999999999999999987542 3344567889999999999999999999999999999
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
+||||+++++|.+++... ..+++..+..++.||+.||.|||++ +|+|+||||+|||++.+|.+||+|||++.....
T Consensus 80 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~- 156 (333)
T cd06650 80 ICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID- 156 (333)
T ss_pred EEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhh-
Confidence 999999999999999764 4589999999999999999999985 799999999999999999999999999843210
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChH
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 900 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~ 900 (998)
.......|++.|+|||++.+..++.++|||||||++|+|++|+.||......
T Consensus 157 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~ 208 (333)
T cd06650 157 ----------------------------SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAK 208 (333)
T ss_pred ----------------------------hccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchh
Confidence 0112346899999999999988999999999999999999999999865543
Q ss_pred HHHHHH--------------------------------------------HhCCCCCCCCCCCcHHHHHHHHHccccCcc
Q 001902 901 KTFANI--------------------------------------------LHKDLKFPSSTPTSLHAKQLMYRLLHRDPK 936 (998)
Q Consensus 901 ~~~~~i--------------------------------------------~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~ 936 (998)
.....+ .....+.......+.++.+||.+||+.||+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~ 288 (333)
T cd06650 209 ELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPA 288 (333)
T ss_pred HHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcc
Confidence 322111 111111111123467889999999999999
Q ss_pred CcCCChhcHHHHHcCCCccCC
Q 001902 937 SRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 937 ~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
+||| +.++++||||+..
T Consensus 289 ~Rpt----~~ell~h~~~~~~ 305 (333)
T cd06650 289 ERAD----LKQLMVHAFIKRS 305 (333)
T ss_pred cCcC----HHHHhhCHHHhcC
Confidence 9999 9999999999874
No 106
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=3.3e-39 Score=357.98 Aligned_cols=256 Identities=26% Similarity=0.438 Sum_probs=209.2
Q ss_pred CCcccccccCCCCceeEEEEEEcc-CCeEEEEEEeecccccChhHHHHHHHHHHHHHhC---CCCCccceeEEEe-----
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCG-SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML---DHPFVPALYASFQ----- 735 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~-~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l---~h~nIv~l~~~~~----- 735 (998)
++|++++.||+|+||.||+|.+.. +++.||+|.++...... .......+|+.+++.+ +||||+++++++.
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCC-CchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 379999999999999999999854 47889999987543222 2223455677777665 6999999999885
Q ss_pred eCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcc
Q 001902 736 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 815 (998)
Q Consensus 736 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~ 815 (998)
....+++||||++ ++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus 80 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~ 158 (290)
T cd07862 80 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 158 (290)
T ss_pred CCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceE
Confidence 3457899999995 689999877655668999999999999999999999999999999999999999999999999985
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCC
Q 001902 816 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 895 (998)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~ 895 (998)
..... .......||+.|+|||++.+..++.++|||||||++|+|++|.+||.
T Consensus 159 ~~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~ 210 (290)
T cd07862 159 IYSFQ----------------------------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFR 210 (290)
T ss_pred eccCC----------------------------cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcC
Confidence 43211 11234568999999999998899999999999999999999999999
Q ss_pred CCChHHHHHHHHhCCC-C----CCC--------------------CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 896 GKTRQKTFANILHKDL-K----FPS--------------------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 896 ~~~~~~~~~~i~~~~~-~----~~~--------------------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
+.+....+..+..... + ++. ....+..+.+|+.+||+.||++||| +.++|+
T Consensus 211 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s----~~~~l~ 286 (290)
T cd07862 211 GSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRIS----AYSALS 286 (290)
T ss_pred CCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCC----HHHHhc
Confidence 9887777776654211 0 000 0235677899999999999999999 999999
Q ss_pred CCCc
Q 001902 951 HPFF 954 (998)
Q Consensus 951 Hp~f 954 (998)
||||
T Consensus 287 hp~f 290 (290)
T cd07862 287 HPYF 290 (290)
T ss_pred CCCC
Confidence 9998
No 107
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=3.5e-39 Score=378.29 Aligned_cols=256 Identities=26% Similarity=0.419 Sum_probs=207.9
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC------
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 737 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------ 737 (998)
..+|++++.||+|+||.||+|.+..+++.||+|.+.... ....+|+.+++.++||||++++++|...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~ 137 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNE 137 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhcCCCCCcceeeeEeecccccCC
Confidence 457999999999999999999999999999999886431 2234699999999999999999887432
Q ss_pred --CeEEEEEecCCCCchhHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCC-cEEEEecc
Q 001902 738 --THVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFD 812 (998)
Q Consensus 738 --~~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g-~vkL~DFG 812 (998)
..+++||||++ ++|.+++.. .....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||
T Consensus 138 ~~~~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 138 KNIFLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred CceEEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccc
Confidence 25789999995 577776653 2345699999999999999999999999999999999999999665 79999999
Q ss_pred CccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCC
Q 001902 813 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGY 891 (998)
Q Consensus 813 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~ 891 (998)
+|...... .......||+.|+|||++.+. .++.++|||||||++|+|++|.
T Consensus 217 la~~~~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~ 268 (440)
T PTZ00036 217 SAKNLLAG----------------------------QRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGY 268 (440)
T ss_pred cchhccCC----------------------------CCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 98543210 111235689999999998764 6899999999999999999999
Q ss_pred CCCCCCChHHHHHHHHhC-----------------CCCCCC----------CCCCcHHHHHHHHHccccCccCcCCChhc
Q 001902 892 TPFRGKTRQKTFANILHK-----------------DLKFPS----------STPTSLHAKQLMYRLLHRDPKSRLGSHEG 944 (998)
Q Consensus 892 ~Pf~~~~~~~~~~~i~~~-----------------~~~~~~----------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 944 (998)
+||.+.+....+..++.. .+.++. ....+.++.+||.+||.+||.+|||
T Consensus 269 ~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~t---- 344 (440)
T PTZ00036 269 PIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLN---- 344 (440)
T ss_pred CCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcC----
Confidence 999998777666665431 111111 1124678999999999999999999
Q ss_pred HHHHHcCCCccCCCh
Q 001902 945 ANEIKKHPFFKGVNW 959 (998)
Q Consensus 945 a~elL~Hp~f~~~~~ 959 (998)
+.++|+||||..+..
T Consensus 345 a~e~l~hp~f~~~~~ 359 (440)
T PTZ00036 345 PIEALADPFFDDLRD 359 (440)
T ss_pred HHHHhCChhHHhhhc
Confidence 999999999987644
No 108
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2e-40 Score=352.70 Aligned_cols=255 Identities=27% Similarity=0.470 Sum_probs=213.7
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC--C---eE
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--T---HV 740 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~---~~ 740 (998)
.|...+.+|.|+||.||.+...++++.+|||.+-.+. +.-..|+.||+.++|||||++..+|... . +.
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~-------r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~l 97 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK-------RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYL 97 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC-------CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHH
Confidence 5888899999999999999999999999999876542 2334699999999999999999888632 2 45
Q ss_pred EEEEecCCCCchhHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecC-CcEEEEeccCcccc
Q 001902 741 CLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLT 817 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~-g~vkL~DFG~a~~~ 817 (998)
.+||||| .-+|.++++. .....++.-.++.++.||++||.|||+.||+||||||.|+|+|.+ |.+||||||.|+..
T Consensus 98 nlVleym-P~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 98 NLVLEYM-PETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHHHHhc-hHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 6999999 6799988874 123558899999999999999999999999999999999999965 99999999999765
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRG 896 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf~~ 896 (998)
.. .....++..|..|+|||.+.+. .|+.+.||||.||++.||+-|++.|.|
T Consensus 177 ~~----------------------------~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG 228 (364)
T KOG0658|consen 177 VK----------------------------GEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPG 228 (364)
T ss_pred cc----------------------------CCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCC
Confidence 31 1223456789999999999885 688999999999999999999999999
Q ss_pred CChHHHHHHHHhC-----------------CCCCC----------CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHH
Q 001902 897 KTRQKTFANILHK-----------------DLKFP----------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 949 (998)
Q Consensus 897 ~~~~~~~~~i~~~-----------------~~~~~----------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL 949 (998)
.+...++..|++- ..++| .....++++.+|+.++|.++|.+|.+ +.+++
T Consensus 229 ~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~----~~~~l 304 (364)
T KOG0658|consen 229 DSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLS----ALEAL 304 (364)
T ss_pred CCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCC----HHHHh
Confidence 9998888877651 11111 12345778999999999999999999 99999
Q ss_pred cCCCccCCChh
Q 001902 950 KHPFFKGVNWA 960 (998)
Q Consensus 950 ~Hp~f~~~~~~ 960 (998)
.||||....-.
T Consensus 305 ~h~fFdelr~~ 315 (364)
T KOG0658|consen 305 AHPFFDELRDP 315 (364)
T ss_pred cchhhHHhhCc
Confidence 99999986444
No 109
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=7.2e-39 Score=365.95 Aligned_cols=257 Identities=26% Similarity=0.419 Sum_probs=209.5
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
....++|+.++.||+|+||.||+|.+..+++.||+|++.... .......+.+|+.+++.++|+||+++++++...+.+
T Consensus 70 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 147 (353)
T PLN00034 70 AKSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEI 147 (353)
T ss_pred CCCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeE
Confidence 344678999999999999999999999999999999986532 334456788999999999999999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
|+||||+++++|.+. ....+..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 148 ~lv~e~~~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~ 221 (353)
T PLN00034 148 QVLLEFMDGGSLEGT------HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQT 221 (353)
T ss_pred EEEEecCCCCccccc------ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccc
Confidence 999999999998653 23567788899999999999999999999999999999999999999999998543210
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-----CCCCChhHHHHHHHHHHHHHcCCCCCC
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTPFR 895 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----~~~~~~sDIwSlG~il~eLltG~~Pf~ 895 (998)
........||..|+|||++.. ...+.++|||||||++|+|++|+.||.
T Consensus 222 ---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~ 274 (353)
T PLN00034 222 ---------------------------MDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFG 274 (353)
T ss_pred ---------------------------cccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCC
Confidence 011234579999999998843 234568999999999999999999997
Q ss_pred CCChH---HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 896 GKTRQ---KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 896 ~~~~~---~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
..... .....+... .........+.++.+||.+||..||++||+ +.++++||||.+.
T Consensus 275 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt----~~ell~hp~~~~~ 334 (353)
T PLN00034 275 VGRQGDWASLMCAICMS-QPPEAPATASREFRHFISCCLQREPAKRWS----AMQLLQHPFILRA 334 (353)
T ss_pred CCCCccHHHHHHHHhcc-CCCCCCCccCHHHHHHHHHHccCChhhCcC----HHHHhcCcccccC
Confidence 43322 222222221 122223456889999999999999999999 9999999999985
No 110
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=1.7e-38 Score=355.20 Aligned_cols=302 Identities=38% Similarity=0.676 Sum_probs=242.8
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++++.||.|+||.||++.+..+++.|++|.+.............+.+|+.+++.++||||+++++.+...+.+|+||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36999999999999999999999999999999988664444455667889999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||++|++|.+++... ..+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++..........
T Consensus 81 e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~ 158 (305)
T cd05609 81 EYVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTN 158 (305)
T ss_pred ecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcccc
Confidence 999999999999765 458999999999999999999999999999999999999999999999999885421110000
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 904 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~ 904 (998)
.... . ..............|+..|+|||.+.+..++.++|||||||++|+|++|..||.+......+.
T Consensus 159 ~~~~----------~--~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~ 226 (305)
T cd05609 159 LYEG----------H--IEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFG 226 (305)
T ss_pred cccc----------c--cccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 0000 0 000000011223568899999999988889999999999999999999999999888877777
Q ss_pred HHHhCCCCCCCCC-CCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhhhcCCCCCCCCCCCCCcccccc
Q 001902 905 NILHKDLKFPSST-PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDTEKEY 983 (998)
Q Consensus 905 ~i~~~~~~~~~~~-~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 983 (998)
.+.......+... ..+..+.+||.+||..||++||++. .+.++++||||...+|+......+ ..+|.+.-.....|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~-~~~~ll~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 303 (305)
T cd05609 227 QVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTG-GAFEVKQHRFFLGLDWNGLLRQKA--EFIPQLESEDDTSY 303 (305)
T ss_pred HHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCcc-CHHHHHhCccccCCCHHHHhhcCC--CCCCCCCCcccccc
Confidence 7776655554432 4688899999999999999999853 378999999999999998765433 33466644444443
No 111
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-39 Score=363.03 Aligned_cols=254 Identities=25% Similarity=0.398 Sum_probs=218.6
Q ss_pred cccccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC
Q 001902 658 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 737 (998)
Q Consensus 658 ~~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~ 737 (998)
..+.+....+++++.||+|.||.||++.+.. ...+|+|.++...+. .+.+.+|+.+|++|+|++||++++++..+
T Consensus 199 d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~m~----~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~ 273 (468)
T KOG0197|consen 199 DPWEIPREELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGSMS----PEAFLREAQIMKKLRHEKLVKLYGVCTKQ 273 (468)
T ss_pred CCeeecHHHHHHHHHhcCCccceEEEEEEcC-CCcccceEEeccccC----hhHHHHHHHHHHhCcccCeEEEEEEEecC
Confidence 4456667789999999999999999999943 348999999875332 25677899999999999999999999998
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
+.+|||||||+.|+|.++|+...+..+...+...++.||++|++||+++++|||||-..||||++++.|||+|||+|+..
T Consensus 274 ~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~ 353 (468)
T KOG0197|consen 274 EPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLI 353 (468)
T ss_pred CceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEccccccccc
Confidence 89999999999999999999866778999999999999999999999999999999999999999999999999999743
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 896 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~ 896 (998)
..+.- ......--...|.|||.+....++.+|||||||++||||+| |+.||.+
T Consensus 354 ~d~~Y--------------------------~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~ 407 (468)
T KOG0197|consen 354 GDDEY--------------------------TASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPG 407 (468)
T ss_pred CCCce--------------------------eecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCC
Confidence 21110 00111123457999999999999999999999999999997 9999999
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChh
Q 001902 897 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 943 (998)
Q Consensus 897 ~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 943 (998)
.+..+.+..+.++ ...|....++.++.+++..||+.+|++||||..
T Consensus 408 msn~ev~~~le~G-yRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~ 453 (468)
T KOG0197|consen 408 MSNEEVLELLERG-YRLPRPEGCPDEVYELMKSCWHEDPEDRPTFET 453 (468)
T ss_pred CCHHHHHHHHhcc-CcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHH
Confidence 9999998887765 455666678999999999999999999999764
No 112
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.2e-38 Score=364.89 Aligned_cols=255 Identities=25% Similarity=0.483 Sum_probs=207.9
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC------
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 737 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------ 737 (998)
.++|++++.||+|+||.||++.+..+|+.||+|++.... ........+.+|+.+++.++||||+++++++...
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPF-QNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccc-cchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 478999999999999999999999999999999987542 2334456777899999999999999999998644
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
..+|+||||++ ++|.+.+.. .++...+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||++...
T Consensus 99 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~ 173 (359)
T cd07876 99 QDVYLVMELMD-ANLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 173 (359)
T ss_pred ceeEEEEeCCC-cCHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCcccc
Confidence 35799999995 566666643 3888999999999999999999999999999999999999999999999998542
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 897 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~ 897 (998)
... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.
T Consensus 174 ~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~ 225 (359)
T cd07876 174 CTN----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 225 (359)
T ss_pred ccC----------------------------ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 110 0112346899999999999999999999999999999999999999887
Q ss_pred ChHHHHHHHHh----------------------CCCCC--------------CC----CCCCcHHHHHHHHHccccCccC
Q 001902 898 TRQKTFANILH----------------------KDLKF--------------PS----STPTSLHAKQLMYRLLHRDPKS 937 (998)
Q Consensus 898 ~~~~~~~~i~~----------------------~~~~~--------------~~----~~~~s~~l~~Ll~~~L~~dP~~ 937 (998)
+....+..+.. ....+ +. ....+..+.+||.+||+.||.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~ 305 (359)
T cd07876 226 DHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDK 305 (359)
T ss_pred CHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCccc
Confidence 65443332221 11010 00 0123567899999999999999
Q ss_pred cCCChhcHHHHHcCCCccC
Q 001902 938 RLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 938 Rpt~~~~a~elL~Hp~f~~ 956 (998)
||| +.++|+||||+.
T Consensus 306 R~t----~~e~l~hp~~~~ 320 (359)
T cd07876 306 RIS----VDEALRHPYITV 320 (359)
T ss_pred CCC----HHHHhcCchhhh
Confidence 999 999999999985
No 113
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-39 Score=336.08 Aligned_cols=293 Identities=36% Similarity=0.706 Sum_probs=250.6
Q ss_pred cccccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEee
Q 001902 658 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT 736 (998)
Q Consensus 658 ~~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~ 736 (998)
+.+.+.+++|.+++.||+|+|++|.++++++|.+.||+|++++....+.+.+.-.+.|..+..+. +||.+|-++.+|++
T Consensus 243 ~~~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqt 322 (593)
T KOG0695|consen 243 ISQGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQT 322 (593)
T ss_pred cccccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcc
Confidence 34567789999999999999999999999999999999999999888888888888999998887 79999999999999
Q ss_pred CCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccc
Q 001902 737 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 816 (998)
Q Consensus 737 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~ 816 (998)
+..+++|.||++||+|.-.++++ ..+++++++.+...|+.||.|||++|||.||||.+|+|++..|++||.|+|+++.
T Consensus 323 esrlffvieyv~ggdlmfhmqrq--rklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke 400 (593)
T KOG0695|consen 323 ESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKE 400 (593)
T ss_pred cceEEEEEEEecCcceeeehhhh--hcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhc
Confidence 99999999999999998888776 4599999999999999999999999999999999999999999999999999854
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCC
Q 001902 817 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 896 (998)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~ 896 (998)
.- .+-...++++|||.|.|||.+.+..|...+|.|+||++++||+.|+.||.-
T Consensus 401 ~l---------------------------~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdi 453 (593)
T KOG0695|consen 401 GL---------------------------GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 453 (593)
T ss_pred CC---------------------------CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcce
Confidence 21 122456789999999999999999999999999999999999999999941
Q ss_pred -------CC-hHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChh--cHHHHHcCCCccCCChhhhhcCC
Q 001902 897 -------KT-RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE--GANEIKKHPFFKGVNWALVRCMN 966 (998)
Q Consensus 897 -------~~-~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~--~a~elL~Hp~f~~~~~~~~~~~~ 966 (998)
.+ ..-.+.-|+...+..|.. +|-.+-.+++..|++||.+|+..+. +..++..|+||+.++|.+++
T Consensus 454 vgm~n~d~ntedylfqvilekqiriprs--lsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~le--- 528 (593)
T KOG0695|consen 454 VGMDNPDMNTEDYLFQVILEKQIRIPRS--LSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLE--- 528 (593)
T ss_pred ecCCCcccchhHHHHHHHhhhcccccce--eehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHHh---
Confidence 12 223344556666666654 4556678999999999999998763 58899999999999999984
Q ss_pred CCCCCCCCCCCcccccccc
Q 001902 967 PPELDAPLFATDTEKEYKV 985 (998)
Q Consensus 967 ~~~~~~p~~~~~~~~~~~~ 985 (998)
.+..+|-|+..+..||..
T Consensus 529 -qk~v~ppf~p~i~~d~~l 546 (593)
T KOG0695|consen 529 -QKQVLPPFQPQITDDYGL 546 (593)
T ss_pred -hcccCCCCCCccccccCc
Confidence 344555555555555543
No 114
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.1e-38 Score=363.63 Aligned_cols=255 Identities=25% Similarity=0.460 Sum_probs=210.5
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC------
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 737 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------ 737 (998)
.++|++++.||+|+||.||+|.+..+++.||+|++.... ........+.+|+.+++.++||||+++++++...
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccc-cCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 578999999999999999999999999999999987543 2333456678899999999999999999987543
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
..+|+||||++ ++|.+.+.. .++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++...
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 176 (364)
T cd07875 102 QDVYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176 (364)
T ss_pred CeEEEEEeCCC-CCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCcccc
Confidence 36799999995 577777743 3888999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 897 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~ 897 (998)
... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.
T Consensus 177 ~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 228 (364)
T cd07875 177 GTS----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228 (364)
T ss_pred CCC----------------------------CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Confidence 210 0112346899999999999999999999999999999999999999988
Q ss_pred ChHHHHHHHHhCCC----------------------C--------------CCC----CCCCcHHHHHHHHHccccCccC
Q 001902 898 TRQKTFANILHKDL----------------------K--------------FPS----STPTSLHAKQLMYRLLHRDPKS 937 (998)
Q Consensus 898 ~~~~~~~~i~~~~~----------------------~--------------~~~----~~~~s~~l~~Ll~~~L~~dP~~ 937 (998)
+....+..++.... . ++. ....+..+++||.+||+.||.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~ 308 (364)
T cd07875 229 DHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASK 308 (364)
T ss_pred CHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCccc
Confidence 77666655543100 0 000 0112457889999999999999
Q ss_pred cCCChhcHHHHHcCCCccC
Q 001902 938 RLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 938 Rpt~~~~a~elL~Hp~f~~ 956 (998)
||| +.++|+||||..
T Consensus 309 R~t----~~e~L~hp~~~~ 323 (364)
T cd07875 309 RIS----VDEALQHPYINV 323 (364)
T ss_pred CCC----HHHHhcCccccc
Confidence 999 999999999985
No 115
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=2.6e-38 Score=363.93 Aligned_cols=261 Identities=27% Similarity=0.416 Sum_probs=214.4
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC-----eE
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT-----HV 740 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~-----~~ 740 (998)
+|++.+.||+|+||.||++.+..+|+.||+|.+... .........+.+|+.+++.++|+||+++++++...+ .+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNV-FQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEecccc-ccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence 488899999999999999999999999999998653 223344567889999999999999999999998776 89
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
|+||||+. ++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 80 ~lv~e~~~-~~l~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~ 156 (372)
T cd07853 80 YVVTELMQ-SDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPD 156 (372)
T ss_pred EEEeeccc-cCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccC
Confidence 99999994 6788877653 45999999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCCCCCCCh
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTR 899 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf~~~~~ 899 (998)
. ........+++.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+.
T Consensus 157 ~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~ 210 (372)
T cd07853 157 E--------------------------SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSP 210 (372)
T ss_pred c--------------------------cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCH
Confidence 0 0111234689999999999874 478899999999999999999999998877
Q ss_pred HHHHHHHHhC-----------------------CCCCC-------CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHH
Q 001902 900 QKTFANILHK-----------------------DLKFP-------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 949 (998)
Q Consensus 900 ~~~~~~i~~~-----------------------~~~~~-------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL 949 (998)
...+..+... ....+ .....+.++.+||.+||+.||.+||| +.++|
T Consensus 211 ~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t----~~e~l 286 (372)
T cd07853 211 IQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRIS----AADAL 286 (372)
T ss_pred HHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcC----HHHHh
Confidence 6655544321 11111 11234778999999999999999999 99999
Q ss_pred cCCCccCCChh
Q 001902 950 KHPFFKGVNWA 960 (998)
Q Consensus 950 ~Hp~f~~~~~~ 960 (998)
+||||++..+.
T Consensus 287 ~hp~~~~~~~~ 297 (372)
T cd07853 287 AHPYLDEGRLR 297 (372)
T ss_pred cCHhhCCCcch
Confidence 99999986543
No 116
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-39 Score=333.79 Aligned_cols=265 Identities=30% Similarity=0.482 Sum_probs=222.4
Q ss_pred cccc-cccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCeEEEEE
Q 001902 667 FRPI-KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 667 y~~~-~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
|++. ..||+|+++.|-.+....+|..||||++.+. ......++.+|.+++.++ .|+||++++++|+++..+||||
T Consensus 79 YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq---~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVf 155 (463)
T KOG0607|consen 79 YKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ---PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVF 155 (463)
T ss_pred HHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcC---CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEE
Confidence 4433 5689999999999999999999999999876 344567888999999999 7999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCC---cEEEEeccCccccCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g---~vkL~DFG~a~~~~~~~ 821 (998)
|.|.||+|...+.++ ..+++..+..++.+|+.||.|||.+||.||||||+|||..+.. -||||||.+..-+....
T Consensus 156 EKm~GGplLshI~~~--~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~ 233 (463)
T KOG0607|consen 156 EKMRGGPLLSHIQKR--KHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNN 233 (463)
T ss_pred ecccCchHHHHHHHh--hhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCC
Confidence 999999999999875 4599999999999999999999999999999999999998654 48999999874321111
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhc-----CCCCCChhHHHHHHHHHHHHHcCCCCCCC
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRG 896 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~~sDIwSlG~il~eLltG~~Pf~~ 896 (998)
... ......-.+.+|+..|||||+.. ...|+.++|.||||+|||-|++|++||.+
T Consensus 234 ~~s--------------------pastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG 293 (463)
T KOG0607|consen 234 DCS--------------------PASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVG 293 (463)
T ss_pred CCC--------------------CCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccC
Confidence 100 00011234568999999999863 34688899999999999999999999976
Q ss_pred CC---------------hHHHHHHHHhCCCCCCC--CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCCh
Q 001902 897 KT---------------RQKTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 959 (998)
Q Consensus 897 ~~---------------~~~~~~~i~~~~~~~~~--~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 959 (998)
.- ....+..|..+.+.||+ +..+|.+.++|+..+|..|+.+|.+ +.++++|||++...-
T Consensus 294 ~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rls----a~~vlnhPw~~~~~~ 369 (463)
T KOG0607|consen 294 HCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLS----AAQVLNHPWVQRCAP 369 (463)
T ss_pred ccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhh----hhhccCCccccccch
Confidence 32 24667788888888875 5678999999999999999999999 999999999998755
Q ss_pred h
Q 001902 960 A 960 (998)
Q Consensus 960 ~ 960 (998)
.
T Consensus 370 e 370 (463)
T KOG0607|consen 370 E 370 (463)
T ss_pred h
Confidence 4
No 117
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=2.1e-38 Score=355.17 Aligned_cols=259 Identities=23% Similarity=0.418 Sum_probs=213.3
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.++|.+++.||+|+||.||++.+..+++.+|+|.++.... ......+.+|+.+++.++|+||+++++++..++..|+|
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 82 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLV 82 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc--CCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEE
Confidence 4689999999999999999999999999999999875432 22234566799999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
|||++ ++|.+++... ...++...++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 83 ~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 158 (309)
T cd07872 83 FEYLD-KDLKQYMDDC-GNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPT-- 158 (309)
T ss_pred EeCCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCc--
Confidence 99995 5888887654 2458999999999999999999999999999999999999999999999999985422110
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 902 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~ 902 (998)
.......+++.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.
T Consensus 159 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~ 213 (309)
T cd07872 159 -------------------------KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDE 213 (309)
T ss_pred -------------------------cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 11123457899999999865 4678899999999999999999999988776555
Q ss_pred HHHHHhC-------------------CCCCCC---------CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 903 FANILHK-------------------DLKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 903 ~~~i~~~-------------------~~~~~~---------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
+..+... ...++. ...++.++.+||.+||+.||.+||| +.++|+||||
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t----~~e~l~h~~~ 289 (309)
T cd07872 214 LHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRIS----AEEAMKHAYF 289 (309)
T ss_pred HHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCC----HHHHhcChhh
Confidence 5444321 011111 1235778999999999999999999 9999999999
Q ss_pred cCC
Q 001902 955 KGV 957 (998)
Q Consensus 955 ~~~ 957 (998)
+..
T Consensus 290 ~~~ 292 (309)
T cd07872 290 RSL 292 (309)
T ss_pred hhc
Confidence 975
No 118
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-39 Score=333.81 Aligned_cols=254 Identities=27% Similarity=0.441 Sum_probs=216.5
Q ss_pred cCCcccc-cccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEee----C
Q 001902 664 LQHFRPI-KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT----K 737 (998)
Q Consensus 664 ~~~y~~~-~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~----~ 737 (998)
.++|.+- +.||-|-.|.|..|.++.|++.+|+|++... ....+|.++.-.. .|||||.++++|.+ .
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~r 131 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--------PKARREVELHWMASGHPHIVSIIDVYENSYQGR 131 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC--------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCc
Confidence 4667665 5699999999999999999999999987632 4455677765444 79999999999864 4
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec---CCcEEEEeccCc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLS 814 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~---~g~vkL~DFG~a 814 (998)
.++.+|||.|+||.|++.+..++...+++..+..|+.||+.|+.|||+.+|.||||||+|+|++. |..+||+|||+|
T Consensus 132 kcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFA 211 (400)
T KOG0604|consen 132 KCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFA 211 (400)
T ss_pred eeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccc
Confidence 57889999999999999999988888999999999999999999999999999999999999985 457999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCC
Q 001902 815 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 894 (998)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf 894 (998)
+.... ...-.+.+-||+|.|||++-..+|+..+|+||+|+++|-|++|.+||
T Consensus 212 K~t~~----------------------------~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPF 263 (400)
T KOG0604|consen 212 KETQE----------------------------PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263 (400)
T ss_pred cccCC----------------------------CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcc
Confidence 65321 11224567899999999999999999999999999999999999999
Q ss_pred CCCCh----HHHHHHHHhCCCCCC--CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 895 RGKTR----QKTFANILHKDLKFP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 895 ~~~~~----~~~~~~i~~~~~~~~--~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
..... ..+..+|..+.+.|| ++...|...+++|+++|..+|.+|+| +.+++.|||+.+.
T Consensus 264 YS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlT----I~~~m~hpwi~~~ 328 (400)
T KOG0604|consen 264 YSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLT----IEEVMDHPWINQY 328 (400)
T ss_pred cccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhhee----HHHhhcCchhccc
Confidence 87553 345566666665555 56678999999999999999999999 9999999999873
No 119
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.7e-38 Score=351.75 Aligned_cols=255 Identities=28% Similarity=0.465 Sum_probs=207.0
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC---CCCCccceeEEEee-----C
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML---DHPFVPALYASFQT-----K 737 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l---~h~nIv~l~~~~~~-----~ 737 (998)
+|++++.||+|+||.||+|.+..+++.||+|.++...... .......+|+.+++.+ +||||+++++++.. .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNED-GLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCC-CCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 5889999999999999999999999999999987543222 2223445567666655 79999999998864 3
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
..+++||||++ ++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 80 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~ 158 (288)
T cd07863 80 TKVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIY 158 (288)
T ss_pred ceEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccc
Confidence 56899999996 58988887655556899999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 897 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~ 897 (998)
... .......||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.
T Consensus 159 ~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~ 210 (288)
T cd07863 159 SCQ----------------------------MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN 210 (288)
T ss_pred cCc----------------------------ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCC
Confidence 211 0112346899999999999989999999999999999999999999887
Q ss_pred ChHHHHHHHHhCC-----CCCC--------------------CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCC
Q 001902 898 TRQKTFANILHKD-----LKFP--------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHP 952 (998)
Q Consensus 898 ~~~~~~~~i~~~~-----~~~~--------------------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp 952 (998)
.....+..+.... ..++ ....++..+.+||.+||+.||.+||| +.+++.||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~~~l~hp 286 (288)
T cd07863 211 SEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRIS----AFRALQHP 286 (288)
T ss_pred CHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCC----HHHHhcCC
Confidence 7766655554310 0000 01235667899999999999999999 99999999
Q ss_pred Cc
Q 001902 953 FF 954 (998)
Q Consensus 953 ~f 954 (998)
||
T Consensus 287 ~f 288 (288)
T cd07863 287 FF 288 (288)
T ss_pred CC
Confidence 98
No 120
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=4.9e-38 Score=342.93 Aligned_cols=260 Identities=26% Similarity=0.382 Sum_probs=220.6
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeeccccc--ChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 742 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~--~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 742 (998)
+.|.+.+.||+|++|.||.|.+..+++.||+|.+...... .......+.+|+.++++++||||+++++++.....+++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4689999999999999999999999999999998754322 12234577889999999999999999999999999999
Q ss_pred EEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCC
Q 001902 743 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 822 (998)
Q Consensus 743 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 822 (998)
||||+++++|.+++... ..+++..++.++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||++........
T Consensus 82 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~ 159 (263)
T cd06625 82 FMEYMPGGSVKDQLKAY--GALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICS 159 (263)
T ss_pred EEEECCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccccc
Confidence 99999999999999765 4589999999999999999999999999999999999999999999999999854321000
Q ss_pred CCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001902 823 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 902 (998)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~ 902 (998)
.........|+..|+|||++.+..++.++|||||||++|+|++|+.||...+....
T Consensus 160 ------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~ 215 (263)
T cd06625 160 ------------------------SGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAA 215 (263)
T ss_pred ------------------------ccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHH
Confidence 00011234688999999999998899999999999999999999999988777666
Q ss_pred HHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 903 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 903 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
...+.............+..+.+||.+||..+|.+||| +.++++||||
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~ll~~~~~ 263 (263)
T cd06625 216 IFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPS----AEELLRHFFV 263 (263)
T ss_pred HHHHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCC----HHHHhhCCCC
Confidence 66665554443344457889999999999999999999 9999999998
No 121
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=2.8e-38 Score=361.43 Aligned_cols=256 Identities=25% Similarity=0.465 Sum_probs=209.0
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC------
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 737 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------ 737 (998)
.++|++++.||+|+||.||+|.+..+++.||+|.+.... ........+.+|+.+++.++||||+++++++...
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcc-cChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 578999999999999999999999999999999987542 2333456677899999999999999999988643
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
..+|+||||++ ++|.+.+.. .++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 95 ~~~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~ 169 (355)
T cd07874 95 QDVYLVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 169 (355)
T ss_pred ceeEEEhhhhc-ccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccC
Confidence 35799999995 567666644 3889999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 897 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~ 897 (998)
... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.
T Consensus 170 ~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 221 (355)
T cd07874 170 GTS----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221 (355)
T ss_pred CCc----------------------------cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 211 0112346899999999999999999999999999999999999999887
Q ss_pred ChHHHHHHHHhC----------------------CCC-----CC-------------CCCCCcHHHHHHHHHccccCccC
Q 001902 898 TRQKTFANILHK----------------------DLK-----FP-------------SSTPTSLHAKQLMYRLLHRDPKS 937 (998)
Q Consensus 898 ~~~~~~~~i~~~----------------------~~~-----~~-------------~~~~~s~~l~~Ll~~~L~~dP~~ 937 (998)
+....+..++.. ... ++ .....+..+.+||.+||..||.+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~ 301 (355)
T cd07874 222 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 301 (355)
T ss_pred CHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchh
Confidence 765544433221 000 00 00113457889999999999999
Q ss_pred cCCChhcHHHHHcCCCccCC
Q 001902 938 RLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 938 Rpt~~~~a~elL~Hp~f~~~ 957 (998)
||| +.++|+||||...
T Consensus 302 Rps----~~ell~hp~~~~~ 317 (355)
T cd07874 302 RIS----VDEALQHPYINVW 317 (355)
T ss_pred cCC----HHHHhcCcchhcc
Confidence 999 9999999999864
No 122
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=2e-38 Score=376.33 Aligned_cols=266 Identities=28% Similarity=0.412 Sum_probs=225.1
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC---
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT--- 738 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~--- 738 (998)
...++|.+.+.||+|+||.||+|.+..+|+.||+|++..... .......+.+|+.++..++|+||++++..+...+
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM-SEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 345799999999999999999999999999999999976533 3445567788999999999999999988775332
Q ss_pred -----eEEEEEecCCCCchhHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEec
Q 001902 739 -----HVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 811 (998)
Q Consensus 739 -----~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DF 811 (998)
.+++||||+++|+|.+++... ....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+||
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DF 187 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDF 187 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEec
Confidence 478999999999999998643 2346899999999999999999999999999999999999999999999999
Q ss_pred cCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCC
Q 001902 812 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGY 891 (998)
Q Consensus 812 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~ 891 (998)
|++........ .......+||+.|+|||++.+..++.++|||||||++|+|++|+
T Consensus 188 Gls~~~~~~~~-------------------------~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~ 242 (496)
T PTZ00283 188 GFSKMYAATVS-------------------------DDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLK 242 (496)
T ss_pred ccCeecccccc-------------------------ccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 99865321100 01123457999999999999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCC
Q 001902 892 TPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 958 (998)
Q Consensus 892 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 958 (998)
.||.+.+....+..+...... +....++.++.+|+.+||+.||.+||+ +.++++|||++..-
T Consensus 243 ~Pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~L~~dP~~RPs----~~ell~~p~~~~~~ 304 (496)
T PTZ00283 243 RPFDGENMEEVMHKTLAGRYD-PLPPSISPEMQEIVTALLSSDPKRRPS----SSKLLNMPICKLFI 304 (496)
T ss_pred CCCCCCCHHHHHHHHhcCCCC-CCCCCCCHHHHHHHHHHcccChhhCcC----HHHHHhCHHHHHhh
Confidence 999998887777777665443 233457889999999999999999999 99999999998753
No 123
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3e-38 Score=374.53 Aligned_cols=260 Identities=25% Similarity=0.399 Sum_probs=222.6
Q ss_pred CCcccccccCCCCceeEEEEEEccC-CeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGS-GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~-~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
..|.+.+.||+|+||.||+|.+..+ +..+|+|.+... .......+..|+.+++.++||||+++++++...+..|||
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv 143 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN---DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLI 143 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEE
Confidence 4599999999999999999999877 788999976533 334445677899999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCC
Q 001902 744 TDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 821 (998)
|||++|++|.+++... ....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 144 ~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~ 223 (478)
T PTZ00267 144 MEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV 223 (478)
T ss_pred EECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcc
Confidence 9999999999887542 23468999999999999999999999999999999999999999999999999986532110
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHH
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 901 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~ 901 (998)
. .......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+...
T Consensus 224 ~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~ 278 (478)
T PTZ00267 224 S-------------------------LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE 278 (478)
T ss_pred c-------------------------cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 0 012235679999999999999999999999999999999999999999988888
Q ss_pred HHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 902 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 902 ~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
.+..+..+... +....++..+.+||.+||..||.+||+ +.+++.|+|++.+
T Consensus 279 ~~~~~~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~Rps----~~~~l~~~~~~~~ 329 (478)
T PTZ00267 279 IMQQVLYGKYD-PFPCPVSSGMKALLDPLLSKNPALRPT----TQQLLHTEFLKYV 329 (478)
T ss_pred HHHHHHhCCCC-CCCccCCHHHHHHHHHHhccChhhCcC----HHHHHhCHHHHHH
Confidence 88777766543 223457889999999999999999999 9999999999753
No 124
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-39 Score=327.07 Aligned_cols=258 Identities=27% Similarity=0.432 Sum_probs=219.5
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCeEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCL 742 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~l 742 (998)
.++.+.+..||.|+.|.|++++.+.+|...|||.+.+. .+.+..++++..+.++.+. ++|+||+++++|..+..++|
T Consensus 91 indl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt--~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~I 168 (391)
T KOG0983|consen 91 INDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRT--GNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFI 168 (391)
T ss_pred hHHhhhHHhhcCCCccceEEEEEcccceEEEEEeeccc--CCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHH
Confidence 45667788899999999999999999999999999864 3566677888888777665 59999999999999999999
Q ss_pred EEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCcEEEecCCcEEEEeccCccccCCCC
Q 001902 743 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 743 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 821 (998)
.||.| +..+..++++. .+++++..+-++..-++.||.||..+ ||||||+||+|||+|..|++||||||++..+..
T Consensus 169 cMelM-s~C~ekLlkri-k~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvd-- 244 (391)
T KOG0983|consen 169 CMELM-STCAEKLLKRI-KGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVD-- 244 (391)
T ss_pred HHHHH-HHHHHHHHHHh-cCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeec--
Confidence 99999 77777777665 35699999999999999999999865 999999999999999999999999999855431
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhc---CCCCCChhHHHHHHHHHHHHHcCCCCCCCC-
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGK- 897 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~sDIwSlG~il~eLltG~~Pf~~~- 897 (998)
+...+.-.|-+.|||||.+. ...|+.++||||||++++||.||..||.+.
T Consensus 245 --------------------------SkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~ 298 (391)
T KOG0983|consen 245 --------------------------SKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCK 298 (391)
T ss_pred --------------------------ccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCC
Confidence 12334456999999999985 457888999999999999999999999985
Q ss_pred ChHHHHHHHHhCCCC-CCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 898 TRQKTFANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 898 ~~~~~~~~i~~~~~~-~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
...+.+.++++...+ ++.....|+.+.+|+..||++|+.+||. ..+||+|||+...
T Consensus 299 tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~----Y~~Ll~h~Fi~~y 355 (391)
T KOG0983|consen 299 TDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPK----YNKLLEHPFIKRY 355 (391)
T ss_pred ccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcc----hHHHhcCcceeec
Confidence 446677777765443 4445568999999999999999999999 9999999999874
No 125
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.5e-38 Score=361.84 Aligned_cols=256 Identities=27% Similarity=0.430 Sum_probs=210.6
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC------
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 737 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------ 737 (998)
.++|++++.||.|+||.||+|.+..+++.||+|.+..... .......+.+|+.+++.++|+||+++++++...
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ-SLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhh-hhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 3689999999999999999999999999999999875422 223345677899999999999999999887533
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
...|++|+++ +++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~ 168 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQA 168 (343)
T ss_pred CcEEEEeecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceec
Confidence 4579999999 8899888764 34999999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 896 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~ 896 (998)
.. .....+||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+
T Consensus 169 ~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 218 (343)
T cd07878 169 DD------------------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPG 218 (343)
T ss_pred CC------------------------------CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 21 1123468999999999977 5688899999999999999999999988
Q ss_pred CChHHHHHHHHhCCC----------------------C-CCC------CCCCcHHHHHHHHHccccCccCcCCChhcHHH
Q 001902 897 KTRQKTFANILHKDL----------------------K-FPS------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 947 (998)
Q Consensus 897 ~~~~~~~~~i~~~~~----------------------~-~~~------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~e 947 (998)
.+....+..+..... + .+. ....++.+.+||.+||..||.+||| +.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s----~~e 294 (343)
T cd07878 219 NDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRIS----ASE 294 (343)
T ss_pred CCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCC----HHH
Confidence 766555544432100 0 000 0124566889999999999999999 999
Q ss_pred HHcCCCccCCC
Q 001902 948 IKKHPFFKGVN 958 (998)
Q Consensus 948 lL~Hp~f~~~~ 958 (998)
+|+||||....
T Consensus 295 ll~hp~~~~~~ 305 (343)
T cd07878 295 ALAHPYFSQYH 305 (343)
T ss_pred HhcCcchhccC
Confidence 99999998753
No 126
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=4.9e-38 Score=346.39 Aligned_cols=263 Identities=35% Similarity=0.603 Sum_probs=218.9
Q ss_pred cCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEecCCCCch
Q 001902 673 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 752 (998)
Q Consensus 673 LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ggsL 752 (998)
||+|+||.||+|.+..+|+.||+|++.+...........+..|+++++.++||||+++++++...+..|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 69999999999999999999999999865443444455667899999999999999999999999999999999999999
Q ss_pred hHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcchhhh
Q 001902 753 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 832 (998)
Q Consensus 753 ~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 832 (998)
.+++.......+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||.+......
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~------------ 148 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG------------ 148 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccC------------
Confidence 99998765456999999999999999999999999999999999999999999999999987543210
Q ss_pred hcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCC-
Q 001902 833 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDL- 911 (998)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~~~~- 911 (998)
.......++..|+|||++.+..++.++|||||||++|+|++|+.||...........+.....
T Consensus 149 ----------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 212 (277)
T cd05577 149 ----------------KKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE 212 (277)
T ss_pred ----------------CccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc
Confidence 011233578899999999888899999999999999999999999977654222222222111
Q ss_pred -CCCCCCCCcHHHHHHHHHccccCccCcCCChh-cHHHHHcCCCccCCChhhhh
Q 001902 912 -KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVR 963 (998)
Q Consensus 912 -~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~-~a~elL~Hp~f~~~~~~~~~ 963 (998)
........+..+.++|.+||..||.+||++.+ .+.++++||||..++|..+.
T Consensus 213 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~~~~~ 266 (277)
T cd05577 213 MAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNWRRLE 266 (277)
T ss_pred ccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCChhhhh
Confidence 11222346889999999999999999997776 79999999999999997773
No 127
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=3.8e-38 Score=373.31 Aligned_cols=254 Identities=23% Similarity=0.382 Sum_probs=203.5
Q ss_pred ccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCC------CCccceeEEEee
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH------PFVPALYASFQT 736 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h------~nIv~l~~~~~~ 736 (998)
..++|++++.||+|+||.||+|.+..+++.||||+++... ........|+.+++.+.| .+++.++++|..
T Consensus 127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch----hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 3578999999999999999999999999999999986421 122345567777777654 458888888875
Q ss_pred C-CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCcEEEecCC----------
Q 001902 737 K-THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNG---------- 804 (998)
Q Consensus 737 ~-~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~~IiHrDLkP~NILi~~~g---------- 804 (998)
. .++|+||+++ |++|.+++.+. ..+++..++.++.||+.||.|||+ .|||||||||+|||++.++
T Consensus 203 ~~~~~~iv~~~~-g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~ 279 (467)
T PTZ00284 203 ETGHMCIVMPKY-GPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRA 279 (467)
T ss_pred CCceEEEEEecc-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccc
Confidence 4 5799999999 88898888764 459999999999999999999998 5999999999999998765
Q ss_pred ------cEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHH
Q 001902 805 ------HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 878 (998)
Q Consensus 805 ------~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIw 878 (998)
.+||+|||.+.... ......+||+.|+|||++.+..++.++|||
T Consensus 280 ~~~~~~~vkl~DfG~~~~~~------------------------------~~~~~~~gt~~Y~APE~~~~~~~~~~~Diw 329 (467)
T PTZ00284 280 LPPDPCRVRICDLGGCCDER------------------------------HSRTAIVSTRHYRSPEVVLGLGWMYSTDMW 329 (467)
T ss_pred cCCCCceEEECCCCccccCc------------------------------cccccccCCccccCcHHhhcCCCCcHHHHH
Confidence 49999999874211 112345799999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCC----------------------------------------CCC
Q 001902 879 ALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPS----------------------------------------STP 918 (998)
Q Consensus 879 SlG~il~eLltG~~Pf~~~~~~~~~~~i~~~~~~~~~----------------------------------------~~~ 918 (998)
||||++|+|++|++||.+.+..+.+..+......+|. ...
T Consensus 330 SlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (467)
T PTZ00284 330 SMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVI 409 (467)
T ss_pred HHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhh
Confidence 9999999999999999887765544433221100000 001
Q ss_pred CcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 919 TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 919 ~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
.+..+.+||.+||++||.+||| +.++|+||||+..
T Consensus 410 ~~~~~~dli~~mL~~dP~~R~t----a~e~L~Hp~~~~~ 444 (467)
T PTZ00284 410 RDDLLCDLIYGLLHYDRQKRLN----ARQMTTHPYVLKY 444 (467)
T ss_pred chHHHHHHHHHhCCcChhhCCC----HHHHhcCcccccc
Confidence 1345779999999999999999 9999999999874
No 128
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=7.2e-38 Score=353.83 Aligned_cols=265 Identities=21% Similarity=0.344 Sum_probs=210.7
Q ss_pred cccccCCC--CceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEec
Q 001902 669 PIKPLGSG--DTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 746 (998)
Q Consensus 669 ~~~~LG~G--~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~ 746 (998)
+++.||+| +|++||++.++.+|+.||+|.+..... .......+..|+.+++.++||||+++++++..++..|+||||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 80 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC-TNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF 80 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhc-cHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence 56789999 789999999999999999999875432 233455677899999999999999999999999999999999
Q ss_pred CCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCC
Q 001902 747 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 826 (998)
Q Consensus 747 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~ 826 (998)
+++++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.++++||+.+.........
T Consensus 81 ~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~--- 157 (327)
T cd08227 81 MAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQR--- 157 (327)
T ss_pred cCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhcccccccc---
Confidence 99999999997654456899999999999999999999999999999999999999999999999865332110000
Q ss_pred cchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC--CCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001902 827 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 904 (998)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~ 904 (998)
. ...........++..|+|||++.+ ..++.++|||||||++|+|++|..||..........
T Consensus 158 -------------~----~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~ 220 (327)
T cd08227 158 -------------L----RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL 220 (327)
T ss_pred -------------c----cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHH
Confidence 0 000001123357788999999976 468899999999999999999999998765444333
Q ss_pred HHHhCCCCC--------------------------------------------CCCCCCcHHHHHHHHHccccCccCcCC
Q 001902 905 NILHKDLKF--------------------------------------------PSSTPTSLHAKQLMYRLLHRDPKSRLG 940 (998)
Q Consensus 905 ~i~~~~~~~--------------------------------------------~~~~~~s~~l~~Ll~~~L~~dP~~Rpt 940 (998)
.......+. +.....+..+.+||.+||+.||.+|||
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt 300 (327)
T cd08227 221 EKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPS 300 (327)
T ss_pred HHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCC
Confidence 333221110 011124568899999999999999999
Q ss_pred ChhcHHHHHcCCCccCCC
Q 001902 941 SHEGANEIKKHPFFKGVN 958 (998)
Q Consensus 941 ~~~~a~elL~Hp~f~~~~ 958 (998)
+.++++||||+.++
T Consensus 301 ----~~ell~~p~f~~~~ 314 (327)
T cd08227 301 ----ASTLLNHSFFKQIK 314 (327)
T ss_pred ----HHHHhcChhhhhcc
Confidence 99999999998864
No 129
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=4.2e-38 Score=357.37 Aligned_cols=257 Identities=24% Similarity=0.347 Sum_probs=204.9
Q ss_pred ccccCCcccccccCCCCceeEEEEEEc-----cCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASF 734 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~-----~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~ 734 (998)
++..++|++.+.||+|+||.||+|.+. .+++.||+|++.... .......+.+|+.++..+ +||||+++++++
T Consensus 3 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~ 80 (338)
T cd05102 3 EFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGAC 80 (338)
T ss_pred ccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeEe
Confidence 455678999999999999999999852 345789999987532 233456788999999999 899999999988
Q ss_pred ee-CCeEEEEEecCCCCchhHHHhhCC-----------------------------------------------------
Q 001902 735 QT-KTHVCLITDYCPGGELFLLLDRQP----------------------------------------------------- 760 (998)
Q Consensus 735 ~~-~~~~~lV~E~~~ggsL~~~l~~~~----------------------------------------------------- 760 (998)
.. .+.+++||||+++|+|.+++....
T Consensus 81 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (338)
T cd05102 81 TKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPP 160 (338)
T ss_pred cCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccc
Confidence 65 456899999999999999987531
Q ss_pred -------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcchhhhh
Q 001902 761 -------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKR 833 (998)
Q Consensus 761 -------~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~ 833 (998)
...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 161 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~----------- 229 (338)
T cd05102 161 QETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD----------- 229 (338)
T ss_pred hhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcc-----------
Confidence 12477888999999999999999999999999999999999999999999999854321110
Q ss_pred cccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCC
Q 001902 834 RHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLK 912 (998)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~ 912 (998)
........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+......+...+.....
T Consensus 230 --------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~ 295 (338)
T cd05102 230 --------------YVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTR 295 (338)
T ss_pred --------------hhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCC
Confidence 011123356788999999999999999999999999999996 99999886654444444433323
Q ss_pred CCCCCCCcHHHHHHHHHccccCccCcCCChhc
Q 001902 913 FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 944 (998)
Q Consensus 913 ~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 944 (998)
.......+..+.+|+.+||..||.+|||+.++
T Consensus 296 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el 327 (338)
T cd05102 296 MRAPENATPEIYRIMLACWQGDPKERPTFSAL 327 (338)
T ss_pred CCCCCCCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 33334568899999999999999999994443
No 130
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.2e-37 Score=345.99 Aligned_cols=264 Identities=26% Similarity=0.447 Sum_probs=222.9
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.+.|++++.||.|+||.||++.+..+++.+++|++... +......+..|+.+++.++|+||+++++++..++.+|+|
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIM 87 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEE
Confidence 36799999999999999999999999999999998753 444567788899999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
|||+++++|..++.... ..+++..+..++.||+.+|.|||+.||+||||||+||+++.++.++|+|||++......
T Consensus 88 ~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~--- 163 (292)
T cd06644 88 IEFCPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT--- 163 (292)
T ss_pred EecCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccc---
Confidence 99999999988876542 45899999999999999999999999999999999999999999999999987432100
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhc-----CCCCCChhHHHHHHHHHHHHHcCCCCCCCCC
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRGKT 898 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~ 898 (998)
........+++.|+|||++. ...++.++|||||||++|+|++|.+||...+
T Consensus 164 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~ 219 (292)
T cd06644 164 ------------------------LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN 219 (292)
T ss_pred ------------------------ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCcccc
Confidence 01122446889999999985 3446779999999999999999999998877
Q ss_pred hHHHHHHHHhCCC-CCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhh
Q 001902 899 RQKTFANILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 962 (998)
Q Consensus 899 ~~~~~~~i~~~~~-~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~ 962 (998)
....+..+..... ........+..+.+||.+||..||++||+ +.++++||||..+++...
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~~~~~~ 280 (292)
T cd06644 220 PMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPS----AAQLLEHPFVSSVTSNRP 280 (292)
T ss_pred HHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcC----HHHHhcCccccccccchh
Confidence 6666666554432 22233456788999999999999999999 999999999999888654
No 131
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1e-37 Score=340.63 Aligned_cols=258 Identities=41% Similarity=0.746 Sum_probs=221.2
Q ss_pred cCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEecCCCCch
Q 001902 673 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 752 (998)
Q Consensus 673 LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ggsL 752 (998)
||.|++|.||+|.+..+++.|++|++.+...........+.+|+.+++.++||||+++++.+..+..+|+||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 69999999999999988999999999876555555667889999999999999999999999999999999999999999
Q ss_pred hHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcchhhh
Q 001902 753 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 832 (998)
Q Consensus 753 ~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 832 (998)
.+++.+. ..++...+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~----------- 147 (262)
T cd05572 81 WTILRDR--GLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ----------- 147 (262)
T ss_pred HHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-----------
Confidence 9999775 348999999999999999999999999999999999999999999999999985432110
Q ss_pred hcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCC--hHHHHHHHHhCC
Q 001902 833 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT--RQKTFANILHKD 910 (998)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~--~~~~~~~i~~~~ 910 (998)
......|++.|+|||.+.+..++.++|+||||+++|+|++|..||.... ....+..+....
T Consensus 148 -----------------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 210 (262)
T cd05572 148 -----------------KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGN 210 (262)
T ss_pred -----------------ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccC
Confidence 1123468899999999988889999999999999999999999998776 566666666432
Q ss_pred CCCCCCCCCcHHHHHHHHHccccCccCcCCCh-hcHHHHHcCCCccCCChh
Q 001902 911 LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWA 960 (998)
Q Consensus 911 ~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~ 960 (998)
.........+..+.+||.+||..+|.+||++. ..+.++++||||+.++|.
T Consensus 211 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~ 261 (262)
T cd05572 211 GKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFDWE 261 (262)
T ss_pred CCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCCCCC
Confidence 22222233478999999999999999999943 458999999999999885
No 132
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1e-37 Score=348.31 Aligned_cols=260 Identities=25% Similarity=0.412 Sum_probs=214.3
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.++|.+++.||.|+||.||+|.+..+++.||+|.+..... ......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 82 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLV 82 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc--cCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEE
Confidence 5689999999999999999999999999999999875422 22234567899999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
|||++ ++|.+++... ...+++..++.++.||+.||.|||++||+|+||||+|||++.++.++|+|||++.......
T Consensus 83 ~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-- 158 (301)
T cd07873 83 FEYLD-KDLKQYLDDC-GNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT-- 158 (301)
T ss_pred Eeccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC--
Confidence 99995 6898888664 3458999999999999999999999999999999999999999999999999985422110
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 902 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~ 902 (998)
.......+++.|+|||++.+. .++.++|||||||++|+|++|++||.+.+..+.
T Consensus 159 -------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~ 213 (301)
T cd07873 159 -------------------------KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQ 213 (301)
T ss_pred -------------------------CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 111233578999999998764 578899999999999999999999998776655
Q ss_pred HHHHHhCC-------------------CCCCC---------CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 903 FANILHKD-------------------LKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 903 ~~~i~~~~-------------------~~~~~---------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
...+.... ..++. ...++..+.+||.+||+.||.+||| +.++|+||||
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t----~~eil~h~~f 289 (301)
T cd07873 214 LHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRIS----AEEAMKHPYF 289 (301)
T ss_pred HHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcC----HHHHhcCccc
Confidence 54433210 01111 1235778899999999999999999 9999999999
Q ss_pred cCCC
Q 001902 955 KGVN 958 (998)
Q Consensus 955 ~~~~ 958 (998)
+.+.
T Consensus 290 ~~~~ 293 (301)
T cd07873 290 HCLG 293 (301)
T ss_pred cccc
Confidence 8864
No 133
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2.2e-37 Score=336.60 Aligned_cols=256 Identities=25% Similarity=0.445 Sum_probs=218.6
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEee-CCeEEEEE
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-KTHVCLIT 744 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~-~~~~~lV~ 744 (998)
+|++++.||.|++|.||++.+..+++.||+|.+..... .......+.+|+.++++++|+|++++++.+.. ...+|+||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA-SRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVM 79 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc-CHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEe
Confidence 58999999999999999999999999999999875432 33345667889999999999999999998864 45789999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||+++++|.+++.......+++..++.++.+++.||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 80 e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~--- 156 (257)
T cd08223 80 GFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC--- 156 (257)
T ss_pred cccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccC---
Confidence 99999999999987555668999999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 904 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~ 904 (998)
.......|++.|+|||++.+..++.++|||||||++|+|++|..||...+......
T Consensus 157 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~ 212 (257)
T cd08223 157 ------------------------DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVY 212 (257)
T ss_pred ------------------------CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 11224468999999999999999999999999999999999999999887766666
Q ss_pred HHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 905 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 905 ~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
.+..+..+. .....+..+.+|+.+||+.||.+||+ +.++++||||
T Consensus 213 ~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~~l~~~~~ 257 (257)
T cd08223 213 RIIEGKLPP-MPKDYSPELGELIATMLSKRPEKRPS----VKSILRQPYI 257 (257)
T ss_pred HHHhcCCCC-CccccCHHHHHHHHHHhccCcccCCC----HHHHhcCCCC
Confidence 666654422 22356789999999999999999999 9999999997
No 134
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2e-37 Score=336.49 Aligned_cols=256 Identities=28% Similarity=0.445 Sum_probs=221.6
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
+|.+.+.||+|++|.||+|.+..+++.|++|.+..... .......+.+|+.+++.++||||+++++++...+..|+|||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKM-NRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVME 79 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhC-CHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEE
Confidence 47888999999999999999999999999999875433 34455678899999999999999999999999999999999
Q ss_pred cCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCC
Q 001902 746 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 825 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 825 (998)
|+++++|.+++.......++...+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~---- 155 (256)
T cd08529 80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT---- 155 (256)
T ss_pred eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCcc----
Confidence 9999999999987655679999999999999999999999999999999999999999999999999885432110
Q ss_pred CcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001902 826 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 905 (998)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~ 905 (998)
.......|++.|+|||++.+..++.++|+|||||++|+|++|..||...+.......
T Consensus 156 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~ 212 (256)
T cd08529 156 -----------------------NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILK 212 (256)
T ss_pred -----------------------chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 111234688999999999998899999999999999999999999998887777777
Q ss_pred HHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 906 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 906 i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
+.....+.. ....+..+.+++.+||+.+|++||+ +.++++|||+
T Consensus 213 ~~~~~~~~~-~~~~~~~~~~~i~~~l~~~p~~Rp~----~~~ll~~~~~ 256 (256)
T cd08529 213 IIRGVFPPV-SQMYSQQLAQLIDQCLTKDYRQRPD----TFQLLRNPSL 256 (256)
T ss_pred HHcCCCCCC-ccccCHHHHHHHHHHccCCcccCcC----HHHHhhCCCC
Confidence 666543322 2256788999999999999999999 9999999995
No 135
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=2.1e-37 Score=341.77 Aligned_cols=253 Identities=26% Similarity=0.428 Sum_probs=210.6
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++++.||+|+||.||+|.+..+++.||+|++.... .......+.+|+.++++++||||+++++++...+..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICT 78 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEE
Confidence 36889999999999999999999999999999987542 2334467888999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||+++++|..+. .+++..+..++.|++.||.|||+.||+|+||||+|||++.++.++|+|||++.....
T Consensus 79 e~~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~----- 147 (279)
T cd06619 79 EFMDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVN----- 147 (279)
T ss_pred ecCCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccc-----
Confidence 999999986542 378889999999999999999999999999999999999999999999999854320
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCCh-----
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR----- 899 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~----- 899 (998)
.......|+..|+|||++.+..++.++|+|||||++|+|++|..||.....
T Consensus 148 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~ 203 (279)
T cd06619 148 ------------------------SIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSL 203 (279)
T ss_pred ------------------------ccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhccccccc
Confidence 012235789999999999998899999999999999999999999965322
Q ss_pred --HHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCC
Q 001902 900 --QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 958 (998)
Q Consensus 900 --~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 958 (998)
......+.............+.++.+|+.+||+.+|.+||+ +.++++||||+..+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~----~~eil~~~~~~~~~ 260 (279)
T cd06619 204 MPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPA----PENLMDHPFIVQYN 260 (279)
T ss_pred chHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCC----HHHHhcCccccccc
Confidence 12222222222222222346778999999999999999999 99999999998753
No 136
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.7e-37 Score=340.64 Aligned_cols=255 Identities=27% Similarity=0.410 Sum_probs=213.4
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEee------C
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT------K 737 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~------~ 737 (998)
+.|++.+.||.|+||.||+|.+..+++.+|+|++.... .....+.+|+.++..+ +|+||+++++++.. .
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 56999999999999999999999999999999987532 2235677899999998 79999999999865 3
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
..+|+||||+++++|.+++.......+++..+..++.|++.||+|||+++|+|+||||+||+++.++.++|+|||++...
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~ 161 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 161 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceec
Confidence 46899999999999999998755566899999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhc-----CCCCCChhHHHHHHHHHHHHHcCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYT 892 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~~sDIwSlG~il~eLltG~~ 892 (998)
... ........|++.|+|||++. ...++.++|||||||++|+|++|..
T Consensus 162 ~~~---------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~ 214 (272)
T cd06637 162 DRT---------------------------VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAP 214 (272)
T ss_pred ccc---------------------------cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence 210 01123456899999999986 3457889999999999999999999
Q ss_pred CCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 893 PFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 893 Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
||...........+.............+..+.+|+.+||..||.+||| +.++++||||
T Consensus 215 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~il~~~~~ 272 (272)
T cd06637 215 PLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPT----TEQLMKHPFI 272 (272)
T ss_pred CccccCHHHHHHHHhcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCC----HHHHhhCCCC
Confidence 998766655555444433333333456789999999999999999999 9999999998
No 137
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.3e-37 Score=340.29 Aligned_cols=259 Identities=30% Similarity=0.464 Sum_probs=222.4
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++.+.||.|++|.||++.+..++..+|+|++.... .......+.+|+.+++.++|+||+++++++.....+|+|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE--AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIM 78 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc--cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEE
Confidence 47899999999999999999999999999999987542 2334566788999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||+++++|.+++... .+++..++.++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++.......
T Consensus 79 e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--- 152 (274)
T cd06609 79 EYCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM--- 152 (274)
T ss_pred EeeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccc---
Confidence 999999999998764 58999999999999999999999999999999999999999999999999986543110
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 904 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~ 904 (998)
.......|++.|+|||++.+..++.++|||||||++|+|++|..||...+......
T Consensus 153 ------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~ 208 (274)
T cd06609 153 ------------------------SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLF 208 (274)
T ss_pred ------------------------cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHH
Confidence 11233468899999999999889999999999999999999999998877666655
Q ss_pred HHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCCh
Q 001902 905 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 959 (998)
Q Consensus 905 ~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 959 (998)
.+.....+.......+..+.+++.+||..+|++||| +.++++||||+...-
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt----~~~il~~~~~~~~~~ 259 (274)
T cd06609 209 LIPKNNPPSLEGNKFSKPFKDFVSLCLNKDPKERPS----AKELLKHKFIKKAKK 259 (274)
T ss_pred HhhhcCCCCCcccccCHHHHHHHHHHhhCChhhCcC----HHHHhhChhhcCCCc
Confidence 555543332222236788999999999999999999 999999999998644
No 138
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.2e-37 Score=360.71 Aligned_cols=260 Identities=25% Similarity=0.413 Sum_probs=211.6
Q ss_pred cCCcccccccCCCCceeEEEEEEc--cCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~--~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 741 (998)
..+|.+++.||+|+||.||+|... .+++.|++|.+... ....+|+.+++.++||||+++++++.....+|
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~ 162 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--------KTPGREIDILKTISHRAIINLIHAYRWKSTVC 162 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEE
Confidence 457999999999999999999864 35688999987643 23457999999999999999999999999999
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 821 (998)
+|||++ +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||+++......
T Consensus 163 lv~e~~-~~~l~~~l~~~--~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~ 239 (392)
T PHA03207 163 MVMPKY-KCDLFTYVDRS--GPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHP 239 (392)
T ss_pred EEehhc-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCccc
Confidence 999999 57888888543 569999999999999999999999999999999999999999999999999986533111
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCCh--
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR-- 899 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~-- 899 (998)
. ........||+.|+|||++.+..++.++|||||||++|+|++|..||.+...
T Consensus 240 ~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~ 294 (392)
T PHA03207 240 D-------------------------TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKS 294 (392)
T ss_pred c-------------------------cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCC
Confidence 0 0112345799999999999999999999999999999999999999976532
Q ss_pred -HHHHHHHHhC----CCCC-------------------------CC---CCCCcHHHHHHHHHccccCccCcCCChhcHH
Q 001902 900 -QKTFANILHK----DLKF-------------------------PS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 946 (998)
Q Consensus 900 -~~~~~~i~~~----~~~~-------------------------~~---~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~ 946 (998)
...+..++.. ...+ +. ....+.++.+||.+||..||.+||+ +.
T Consensus 295 ~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rps----a~ 370 (392)
T PHA03207 295 SSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPS----AQ 370 (392)
T ss_pred cHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCC----HH
Confidence 2222222211 0000 10 0123567889999999999999999 99
Q ss_pred HHHcCCCccCCChhhhh
Q 001902 947 EIKKHPFFKGVNWALVR 963 (998)
Q Consensus 947 elL~Hp~f~~~~~~~~~ 963 (998)
++|.||||+...|..+.
T Consensus 371 e~l~~p~f~~~~~~~~~ 387 (392)
T PHA03207 371 DILSLPLFTKEPINLLN 387 (392)
T ss_pred HHhhCchhhccchhhhc
Confidence 99999999998887764
No 139
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=4.2e-38 Score=342.45 Aligned_cols=254 Identities=39% Similarity=0.636 Sum_probs=211.5
Q ss_pred cccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEec
Q 001902 667 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 746 (998)
Q Consensus 667 y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~ 746 (998)
|++++.||+|+||.||++.+..+++.||+|++....... ........|+.+++.++||||+++++++......++||||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEE-EEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHH-HHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccc-cccchhhhhhhccccccccccccccccccccccccccccc
Confidence 788999999999999999999999999999998763322 2222345599999999999999999999999999999999
Q ss_pred CCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCC
Q 001902 747 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 826 (998)
Q Consensus 747 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~ 826 (998)
+++++|.+++... ..++...+..++.||+.||.+||++||+|+||||+||+++.++.++|+|||.+....
T Consensus 80 ~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~-------- 149 (260)
T PF00069_consen 80 CPGGSLQDYLQKN--KPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLS-------- 149 (260)
T ss_dssp ETTEBHHHHHHHH--SSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEEST--------
T ss_pred ccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--------
Confidence 9999999999843 458999999999999999999999999999999999999999999999999985421
Q ss_pred cchhhhhcccCCCCcccccccccccccccCCCCcccchhhc-CCCCCChhHHHHHHHHHHHHHcCCCCCCCCC---hHHH
Q 001902 827 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-GAGHTSAVDWWALGILLYEMLYGYTPFRGKT---RQKT 902 (998)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~---~~~~ 902 (998)
..........+++.|+|||++. +..++.++||||||+++|+|++|..||.... ....
T Consensus 150 -------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~ 210 (260)
T PF00069_consen 150 -------------------ENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEI 210 (260)
T ss_dssp -------------------STTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHH
T ss_pred -------------------ccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhh
Confidence 0111233457899999999998 7888999999999999999999999999873 3333
Q ss_pred HHHHHhCCCCCCC--CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 903 FANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 903 ~~~i~~~~~~~~~--~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
+............ ....+..+.+||.+||+.||++||+ +.++++||||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~----~~~l~~~~~~ 260 (260)
T PF00069_consen 211 IEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPS----AEELLKHPWF 260 (260)
T ss_dssp HHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTT----HHHHHTSGGG
T ss_pred hhhcccccccccccccchhHHHHHHHHHHHccCChhHCcC----HHHHhcCCCC
Confidence 3333332221111 1122478999999999999999999 9999999998
No 140
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=2.3e-37 Score=342.01 Aligned_cols=256 Identities=25% Similarity=0.411 Sum_probs=209.5
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
+|++++.||+|++|.||+|.+..++..||+|.++.... .......+.+|+.+++.++||||+++++++..++..|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE-EEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccc-cCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEe
Confidence 58899999999999999999999999999999875422 22334567789999999999999999999999999999999
Q ss_pred cCCCCchhHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 746 YCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~-~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
|++ ++|.+++.... ...+++..++.++.||+.||.|||++||+|+||||+||+++.+|.++|+|||++......
T Consensus 80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---- 154 (285)
T cd07861 80 FLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP---- 154 (285)
T ss_pred cCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCC----
Confidence 996 68888886533 256899999999999999999999999999999999999999999999999998543211
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 903 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~ 903 (998)
........+++.|+|||++.+. .++.++|||||||++|+|++|++||.+.......
T Consensus 155 -----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~ 211 (285)
T cd07861 155 -----------------------VRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQL 211 (285)
T ss_pred -----------------------cccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence 0112233578999999998764 5788999999999999999999999887654443
Q ss_pred HHHHhCCC------------------CC---------CCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 904 ANILHKDL------------------KF---------PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 904 ~~i~~~~~------------------~~---------~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
..+..... .+ .....++.++.+||.+||..||.+||| +.++++||||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt----~~~ll~~~~~ 285 (285)
T cd07861 212 FRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRIS----AKKALNHPYF 285 (285)
T ss_pred HHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCC----HHHHhcCCCC
Confidence 33322100 00 011236788999999999999999999 9999999998
No 141
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=3.4e-37 Score=345.34 Aligned_cols=256 Identities=27% Similarity=0.421 Sum_probs=213.4
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++.+.||+|+||.||++.+..++..+|+|.+.... .......+.+|+++++.++||||+++++++..++.+|+||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICM 78 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEe
Confidence 36999999999999999999999999999999987532 3344567888999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
||+++++|.+++.+. ..+++..+..++.||+.||.|||+ .+++|+||||+|||++.++.++|+|||++.....
T Consensus 79 ey~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~---- 152 (308)
T cd06615 79 EHMDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---- 152 (308)
T ss_pred eccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccc----
Confidence 999999999999765 458999999999999999999997 5999999999999999999999999998743210
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 903 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~ 903 (998)
.......|++.|+|||++.+..++.++|||||||++|+|++|..||...+.....
T Consensus 153 -------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~ 207 (308)
T cd06615 153 -------------------------SMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELE 207 (308)
T ss_pred -------------------------cccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHH
Confidence 0112356899999999998888999999999999999999999999765543322
Q ss_pred HHHHhCC------------------------------------CCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHH
Q 001902 904 ANILHKD------------------------------------LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 947 (998)
Q Consensus 904 ~~i~~~~------------------------------------~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~e 947 (998)
..+.... .+.......+.++.+|+.+||..+|++||+ +.+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~ 283 (308)
T cd06615 208 AMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERAD----LKE 283 (308)
T ss_pred HhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcC----HHH
Confidence 2221110 000001125678999999999999999999 999
Q ss_pred HHcCCCccCC
Q 001902 948 IKKHPFFKGV 957 (998)
Q Consensus 948 lL~Hp~f~~~ 957 (998)
+++||||.+.
T Consensus 284 ll~~~~~~~~ 293 (308)
T cd06615 284 LTKHPFIKRA 293 (308)
T ss_pred HhcChhhhhc
Confidence 9999999863
No 142
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=2.4e-37 Score=337.20 Aligned_cols=256 Identities=43% Similarity=0.758 Sum_probs=215.6
Q ss_pred cccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHH-HhCCCCCccceeEEEeeCCeEEEEEecCCC
Q 001902 671 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREIL-DMLDHPFVPALYASFQTKTHVCLITDYCPG 749 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il-~~l~h~nIv~l~~~~~~~~~~~lV~E~~~g 749 (998)
+.||.|+||.||+|.+..+++.||+|++.+...........+..|..++ ...+|+||+++++++...+.+|+||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 5799999999999999999999999998765333333334445555544 445899999999999999999999999999
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcch
Q 001902 750 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 829 (998)
Q Consensus 750 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 829 (998)
++|.+++... ..+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 ~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~---------- 149 (260)
T cd05611 82 GDCASLIKTL--GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE---------- 149 (260)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc----------
Confidence 9999999764 4589999999999999999999999999999999999999999999999998743210
Q ss_pred hhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC
Q 001902 830 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK 909 (998)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~~ 909 (998)
.....|+..|+|||.+.+..++.++||||||+++|+|++|..||...+....+..+...
T Consensus 150 ---------------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 208 (260)
T cd05611 150 ---------------------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSR 208 (260)
T ss_pred ---------------------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence 12345888999999998888899999999999999999999999988887777777666
Q ss_pred CCCCCCC--CCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChh
Q 001902 910 DLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 960 (998)
Q Consensus 910 ~~~~~~~--~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~ 960 (998)
...++.. ..++..+.+++.+||..+|++||++.. +.+++.||||+.++|.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~-~~~~l~~~~~~~~~~~ 260 (260)
T cd05611 209 RINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANG-YQEIKSHPFFKSINWD 260 (260)
T ss_pred ccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCc-HHHHHcChHhhcCCCC
Confidence 5544432 246889999999999999999997322 6899999999999883
No 143
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=3.8e-37 Score=339.91 Aligned_cols=259 Identities=36% Similarity=0.654 Sum_probs=205.4
Q ss_pred ccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHH---hCCCCCccceeEEEeeCCeEEEEEecCC
Q 001902 672 PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILD---MLDHPFVPALYASFQTKTHVCLITDYCP 748 (998)
Q Consensus 672 ~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~---~l~h~nIv~l~~~~~~~~~~~lV~E~~~ 748 (998)
.||+|+||.||++.+..+++.+|+|++.+.............+|..+++ ..+|+||+.+++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999999999999999997654433322233344544443 3479999999999999999999999999
Q ss_pred CCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcc
Q 001902 749 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 828 (998)
Q Consensus 749 ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 828 (998)
+++|.+++..+ ..+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++......
T Consensus 81 ~~~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~-------- 150 (279)
T cd05633 81 GGDLHYHLSQH--GVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-------- 150 (279)
T ss_pred CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceecccc--------
Confidence 99999998765 45999999999999999999999999999999999999999999999999988432200
Q ss_pred hhhhhcccCCCCcccccccccccccccCCCCcccchhhc-CCCCCChhHHHHHHHHHHHHHcCCCCCCCCCh--HHHHHH
Q 001902 829 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-GAGHTSAVDWWALGILLYEMLYGYTPFRGKTR--QKTFAN 905 (998)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~--~~~~~~ 905 (998)
......|++.|+|||.+. +..++.++|||||||++|+|++|..||..... ......
T Consensus 151 ---------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~ 209 (279)
T cd05633 151 ---------------------KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR 209 (279)
T ss_pred ---------------------CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHH
Confidence 011235899999999986 45688999999999999999999999976432 122222
Q ss_pred HHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCCh-hcHHHHHcCCCccCCChhhh
Q 001902 906 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALV 962 (998)
Q Consensus 906 i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~ 962 (998)
... ..........+..+.+||.+||..||.+||+.. ..+.++++||||++++|...
T Consensus 210 ~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~~~~~ 266 (279)
T cd05633 210 MTL-TVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDWQQV 266 (279)
T ss_pred Hhh-cCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCCHhHH
Confidence 111 112222234688999999999999999999311 22899999999999999876
No 144
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=2.3e-37 Score=341.31 Aligned_cols=260 Identities=27% Similarity=0.455 Sum_probs=221.4
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++++.||.|+||.||++.+..++..+|+|++... .......+..|+.++++++|+||+++++++......|+||
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE---SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILI 81 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC---CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEe
Confidence 5799999999999999999999889999999998743 3445567888999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||+++++|.+++.... ..+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~---- 156 (280)
T cd06611 82 EFCDGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST---- 156 (280)
T ss_pred eccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhccc----
Confidence 9999999999987642 45999999999999999999999999999999999999999999999999987442210
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhc-----CCCCCChhHHHHHHHHHHHHHcCCCCCCCCCh
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 899 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~ 899 (998)
........|++.|+|||++. ...++.++|||||||++|+|++|.+||...+.
T Consensus 157 -----------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~ 213 (280)
T cd06611 157 -----------------------LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNP 213 (280)
T ss_pred -----------------------ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCH
Confidence 01122456899999999985 34467799999999999999999999998877
Q ss_pred HHHHHHHHhCCCC-CCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCCh
Q 001902 900 QKTFANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 959 (998)
Q Consensus 900 ~~~~~~i~~~~~~-~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 959 (998)
...+..+.....+ +......+..+.+||.+||+.+|.+||+ +.++++||||.....
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il~~~~~~~~~~ 270 (280)
T cd06611 214 MRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPT----AAELLKHPFVSDQSD 270 (280)
T ss_pred HHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcC----HHHHhcChhhcccch
Confidence 7766666654332 2233456789999999999999999999 999999999998644
No 145
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=2.1e-37 Score=337.52 Aligned_cols=265 Identities=45% Similarity=0.827 Sum_probs=225.9
Q ss_pred cCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEecCCCCch
Q 001902 673 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 752 (998)
Q Consensus 673 LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ggsL 752 (998)
||.|+||.||++.+..+|+.+++|++.............+.+|+.++++++|+||+++++.+......|+||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 68999999999999888999999999766544445667888999999999999999999999999999999999999999
Q ss_pred hHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcchhhh
Q 001902 753 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 832 (998)
Q Consensus 753 ~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 832 (998)
.+++.+.. .+++..+..++.||+.||+|||++|++|+||+|+||+++.++.++|+|||++...........
T Consensus 81 ~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~------- 151 (265)
T cd05579 81 ASLLENVG--SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINL------- 151 (265)
T ss_pred HHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccc-------
Confidence 99998753 589999999999999999999999999999999999999999999999999854321111000
Q ss_pred hcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCC
Q 001902 833 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLK 912 (998)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~~~~~ 912 (998)
...........++..|+|||.+....++.++||||||+++|+|++|..||........+..+......
T Consensus 152 ------------~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 219 (265)
T cd05579 152 ------------NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIE 219 (265)
T ss_pred ------------ccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcC
Confidence 00011223456888999999998888899999999999999999999999988888888787776666
Q ss_pred CCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCCh
Q 001902 913 FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 959 (998)
Q Consensus 913 ~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 959 (998)
++.....+..+.+|+.+||+.+|.+|||+.. +.++|+||||+.++|
T Consensus 220 ~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~-~~~~l~~~~~~~~~~ 265 (265)
T cd05579 220 WPEDVEVSDEAIDLISKLLVPDPEKRLGAKS-IEEIKNHPFFKGIDW 265 (265)
T ss_pred CCccccCCHHHHHHHHHHhcCCHhhcCCCcc-HHHHhcCccccCCCC
Confidence 6665556889999999999999999999322 389999999999988
No 146
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.9e-37 Score=378.18 Aligned_cols=265 Identities=25% Similarity=0.388 Sum_probs=218.0
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEee--CC
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KT 738 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~ 738 (998)
....++|++++.||.|+||.||+|.+..++..+|+|++..... .......+..|+.+++.++||||++++++|.. ..
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l-~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~ 87 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL-KEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQ 87 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEecccc-CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCC
Confidence 3446799999999999999999999999999999999876533 33445678889999999999999999998854 46
Q ss_pred eEEEEEecCCCCchhHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHC-------CceeccCCCCcEEEec-------
Q 001902 739 HVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQ-------GIIYRDLKPENVLLQG------- 802 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~-------~IiHrDLkP~NILi~~------- 802 (998)
.+||||||+++++|.++|... ....+++..++.|+.||+.||.|||+. +||||||||+||||+.
T Consensus 88 ~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~ 167 (1021)
T PTZ00266 88 KLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGK 167 (1021)
T ss_pred EEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccc
Confidence 799999999999999998752 234699999999999999999999984 4999999999999964
Q ss_pred ----------CCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC--CC
Q 001902 803 ----------NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AG 870 (998)
Q Consensus 803 ----------~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~ 870 (998)
.+.+||+|||++...... ......+||+.|+|||++.+ ..
T Consensus 168 i~~~~~n~ng~~iVKLsDFGlAr~l~~~----------------------------s~~~s~vGTp~YmAPEvL~ge~~~ 219 (1021)
T PTZ00266 168 ITAQANNLNGRPIAKIGDFGLSKNIGIE----------------------------SMAHSCVGTPYYWSPELLLHETKS 219 (1021)
T ss_pred ccccccccCCCCceEEccCCcccccccc----------------------------ccccccCCCccccCHHHHhccCCC
Confidence 235899999998543211 01224579999999999865 45
Q ss_pred CCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 871 HTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 871 ~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
++.++||||||||||+|++|..||...+....+...+.....++. ...+..+.+||..||..+|.+||+ +.++|.
T Consensus 220 ~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lpi-~~~S~eL~dLI~~~L~~dPeeRPS----a~QlL~ 294 (1021)
T PTZ00266 220 YDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLPI-KGKSKELNILIKNLLNLSAKERPS----ALQCLG 294 (1021)
T ss_pred CCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCCc-CCCCHHHHHHHHHHhcCChhHCcC----HHHHhc
Confidence 788999999999999999999999877665555555544333332 346789999999999999999999 999999
Q ss_pred CCCccCCCh
Q 001902 951 HPFFKGVNW 959 (998)
Q Consensus 951 Hp~f~~~~~ 959 (998)
||||+.+..
T Consensus 295 h~~ik~i~~ 303 (1021)
T PTZ00266 295 YQIIKNVGP 303 (1021)
T ss_pred cHHHhhcCC
Confidence 999986543
No 147
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.9e-37 Score=342.95 Aligned_cols=245 Identities=18% Similarity=0.203 Sum_probs=208.0
Q ss_pred cccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEee----CCeEEEEEec
Q 001902 671 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT----KTHVCLITDY 746 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~----~~~~~lV~E~ 746 (998)
..||+|++|.||++.. +|+.||+|.++............+.+|+.+|++++||||+++++++.+ ...+++||||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 6789999999999998 789999999987544444446778899999999999999999999876 4578999999
Q ss_pred CCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCC
Q 001902 747 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 825 (998)
Q Consensus 747 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 825 (998)
+++|+|.+++... ..++......++.|++.||.|||+. +++||||||+|||++.++.+||+|||++......
T Consensus 104 ~~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~----- 176 (283)
T PHA02988 104 CTRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP----- 176 (283)
T ss_pred CCCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccc-----
Confidence 9999999999764 4588899999999999999999985 9999999999999999999999999998543211
Q ss_pred CcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC--CCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001902 826 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 903 (998)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~ 903 (998)
.....|++.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+....+
T Consensus 177 -------------------------~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~ 231 (283)
T PHA02988 177 -------------------------PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIY 231 (283)
T ss_pred -------------------------cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence 112368899999999976 67899999999999999999999999998888888
Q ss_pred HHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHH
Q 001902 904 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 949 (998)
Q Consensus 904 ~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL 949 (998)
..+......++....++..+.+|+.+||+.||.+|||+.+++..+-
T Consensus 232 ~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~ 277 (283)
T PHA02988 232 DLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLS 277 (283)
T ss_pred HHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHH
Confidence 7777665555444467889999999999999999999555444433
No 148
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.6e-37 Score=361.46 Aligned_cols=254 Identities=27% Similarity=0.385 Sum_probs=205.1
Q ss_pred ccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEE
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 742 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 742 (998)
...+|.+.+.||+|+||.||+|.+..+++.||+|.... ..+.+|+.++++++|+||+++++++...+..|+
T Consensus 167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~l 237 (461)
T PHA03211 167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCL 237 (461)
T ss_pred ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEE
Confidence 35689999999999999999999999999999996432 235679999999999999999999999999999
Q ss_pred EEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCC
Q 001902 743 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 822 (998)
Q Consensus 743 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 822 (998)
|||++ .++|.+++.... ..+++..++.++.||+.||.|||++|||||||||+||||+.++.+||+|||+++.......
T Consensus 238 v~e~~-~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~ 315 (461)
T PHA03211 238 VLPKY-RSDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS 315 (461)
T ss_pred EEEcc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccc
Confidence 99999 578888886542 3599999999999999999999999999999999999999999999999999865321100
Q ss_pred CCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCCh---
Q 001902 823 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR--- 899 (998)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~--- 899 (998)
........||+.|+|||++.+..++.++|||||||+||+|++|..|+.....
T Consensus 316 -------------------------~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~ 370 (461)
T PHA03211 316 -------------------------TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDE 370 (461)
T ss_pred -------------------------cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccc
Confidence 0111245799999999999999999999999999999999998766533211
Q ss_pred ----HHHHHHHHh-CCCC---CC-----------------------------CCCCCcHHHHHHHHHccccCccCcCCCh
Q 001902 900 ----QKTFANILH-KDLK---FP-----------------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSH 942 (998)
Q Consensus 900 ----~~~~~~i~~-~~~~---~~-----------------------------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~ 942 (998)
...+.+++. .... ++ .....+..+.+||.+||+.||.+|||
T Consensus 371 ~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPs-- 448 (461)
T PHA03211 371 RRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPS-- 448 (461)
T ss_pred cCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcC--
Confidence 122222222 1110 11 11124557889999999999999999
Q ss_pred hcHHHHHcCCCccC
Q 001902 943 EGANEIKKHPFFKG 956 (998)
Q Consensus 943 ~~a~elL~Hp~f~~ 956 (998)
+.++|+||||+.
T Consensus 449 --a~elL~hp~f~~ 460 (461)
T PHA03211 449 --AAELLRLPLFQS 460 (461)
T ss_pred --HHHHhhCcccCC
Confidence 999999999975
No 149
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=5e-37 Score=339.19 Aligned_cols=256 Identities=26% Similarity=0.433 Sum_probs=217.0
Q ss_pred cccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEec
Q 001902 667 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 746 (998)
Q Consensus 667 y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~ 746 (998)
|++++.||.|+||.||++.+..++..+++|.+... .......+.+|+.+++.++|+||+++++++...+..|+||||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~ 83 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF 83 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC---CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEe
Confidence 68899999999999999999999999999998643 334556788899999999999999999999999999999999
Q ss_pred CCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCC
Q 001902 747 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 826 (998)
Q Consensus 747 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~ 826 (998)
+++++|..++.+. ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.++|+|||++......
T Consensus 84 ~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~------ 156 (282)
T cd06643 84 CAGGAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT------ 156 (282)
T ss_pred cCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccc------
Confidence 9999999887653 245899999999999999999999999999999999999999999999999998542210
Q ss_pred cchhhhhcccCCCCcccccccccccccccCCCCcccchhhc-----CCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHH
Q 001902 827 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 901 (998)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~ 901 (998)
........|++.|+|||++. +..++.++|||||||++|+|++|.+||...+...
T Consensus 157 ---------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~ 215 (282)
T cd06643 157 ---------------------IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR 215 (282)
T ss_pred ---------------------ccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH
Confidence 01122346899999999984 3456789999999999999999999999887777
Q ss_pred HHHHHHhCCCC-CCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 902 TFANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 902 ~~~~i~~~~~~-~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
....+...... .+.....+..+.+||.+||..||.+||+ +.++++||||+..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~ 268 (282)
T cd06643 216 VLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWT----TTQLLQHPFVTVN 268 (282)
T ss_pred HHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcC----HHHHhcCCCEecc
Confidence 66666554322 2233446789999999999999999999 9999999999864
No 150
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.4e-37 Score=337.43 Aligned_cols=254 Identities=26% Similarity=0.438 Sum_probs=213.1
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.++|.+.+.||+|+||.||+|.+..+++.||+|+++.. .......+.+|+.+++.++||||+++++++...+.+|+|
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv 84 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLE---PGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWIC 84 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecC---chhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Confidence 35899999999999999999999999999999998754 223345677899999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
|||+++++|.+++... +.+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 85 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~--- 159 (267)
T cd06645 85 MEFCGGGSLQDIYHVT--GPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITAT--- 159 (267)
T ss_pred EeccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCc---
Confidence 9999999999998764 45899999999999999999999999999999999999999999999999998543210
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhc---CCCCCChhHHHHHHHHHHHHHcCCCCCCCCChH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 900 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~ 900 (998)
........|++.|+|||++. ...++.++|+|||||++|+|++|..||......
T Consensus 160 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~ 215 (267)
T cd06645 160 ------------------------IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPM 215 (267)
T ss_pred ------------------------ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccch
Confidence 01122346899999999984 455788999999999999999999999776654
Q ss_pred HHHHHHHhCCCCCCC---CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCC
Q 001902 901 KTFANILHKDLKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 953 (998)
Q Consensus 901 ~~~~~i~~~~~~~~~---~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~ 953 (998)
.............+. ...++..+.+|+.+||..+|++||+ +.++++|||
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~----~~~ll~~~~ 267 (267)
T cd06645 216 RALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPT----AEKLLQHPF 267 (267)
T ss_pred hhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcC----HHHHhcCCC
Confidence 444444433332222 2245778999999999999999999 999999998
No 151
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=6.1e-37 Score=338.03 Aligned_cols=260 Identities=35% Similarity=0.640 Sum_probs=209.8
Q ss_pred ccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHH---HHHHhCCCCCccceeEEEeeCCeEEEEEecCC
Q 001902 672 PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAER---EILDMLDHPFVPALYASFQTKTHVCLITDYCP 748 (998)
Q Consensus 672 ~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~---~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ 748 (998)
.||+|+||.||+|.+..+++.||+|++.+..............|. .+++..+||+|+.+++++...+..|+||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 479999999999999999999999998865433222222233343 34455689999999999999999999999999
Q ss_pred CCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcc
Q 001902 749 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 828 (998)
Q Consensus 749 ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 828 (998)
|++|..++... ..+++..++.++.|++.||.|||+.+|+||||||+||+++.++.++|+|||++......
T Consensus 81 g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~-------- 150 (278)
T cd05606 81 GGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-------- 150 (278)
T ss_pred CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc--------
Confidence 99999988764 45999999999999999999999999999999999999999999999999998532200
Q ss_pred hhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCCCC---hHHHHH
Q 001902 829 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKT---RQKTFA 904 (998)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~~~---~~~~~~ 904 (998)
......|+..|+|||++.+ ..++.++||||+||++|+|++|..||.+.. ......
T Consensus 151 ---------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~ 209 (278)
T cd05606 151 ---------------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR 209 (278)
T ss_pred ---------------------CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHH
Confidence 1123368999999999975 468899999999999999999999998763 222222
Q ss_pred HHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcC-----CChhcHHHHHcCCCccCCChhhhhcCCCC
Q 001902 905 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRL-----GSHEGANEIKKHPFFKGVNWALVRCMNPP 968 (998)
Q Consensus 905 ~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rp-----t~~~~a~elL~Hp~f~~~~~~~~~~~~~~ 968 (998)
.+......++ ...+..+.+++.+||..+|.+|| + +.++++||||+..+|..+.....|
T Consensus 210 ~~~~~~~~~~--~~~s~~~~~li~~~l~~~p~~R~~~~~~~----~~~ll~~~~~~~~~~~~~~~~~~~ 272 (278)
T cd05606 210 MTLTMAVELP--DSFSPELRSLLEGLLQRDVNRRLGCLGRG----AQEVKEHPFFRSLDWQMVFLQKYP 272 (278)
T ss_pred HhhccCCCCC--CcCCHHHHHHHHHHhhcCHHhccCCCCCC----HHHHHhCccccCCCchHhhhcccC
Confidence 2222233333 23588999999999999999999 7 999999999999999988555444
No 152
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=6.1e-37 Score=339.74 Aligned_cols=271 Identities=18% Similarity=0.262 Sum_probs=219.0
Q ss_pred ccccCCcccccccCCCCceeEEEEEEcc-----CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEe
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 735 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~-----~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~ 735 (998)
.+..++|++.+.||+|+||.||+|.++. .+..||+|.+.... .......+.+|+.+++.++|+||+++++++.
T Consensus 2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~ 79 (288)
T cd05061 2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA--SLRERIEFLNEASVMKGFTCHHVVRLLGVVS 79 (288)
T ss_pred cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence 3456789999999999999999997642 35689999876432 2233445778999999999999999999999
Q ss_pred eCCeEEEEEecCCCCchhHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEE
Q 001902 736 TKTHVCLITDYCPGGELFLLLDRQP--------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 807 (998)
Q Consensus 736 ~~~~~~lV~E~~~ggsL~~~l~~~~--------~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vk 807 (998)
..+..|+||||+++++|.+++.+.. ...++...+..++.||+.||.|||++||+||||||+|||++.++.++
T Consensus 80 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~ 159 (288)
T cd05061 80 KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVK 159 (288)
T ss_pred CCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEE
Confidence 9999999999999999999997532 12356678899999999999999999999999999999999999999
Q ss_pred EEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHH
Q 001902 808 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 887 (998)
Q Consensus 808 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eL 887 (998)
|+|||++........ ........++..|+|||.+.+..++.++|||||||++|+|
T Consensus 160 L~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el 214 (288)
T cd05061 160 IGDFGMTRDIYETDY-------------------------YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 214 (288)
T ss_pred ECcCCcccccccccc-------------------------ccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHH
Confidence 999999854321100 0111223457789999999988899999999999999999
Q ss_pred Hc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc--CCCccCCCh
Q 001902 888 LY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK--HPFFKGVNW 959 (998)
Q Consensus 888 lt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~--Hp~f~~~~~ 959 (998)
++ |..||.+.........+...... +.....+..+.+++.+||+.||.+|||+.++++.+.+ ||||++++|
T Consensus 215 ~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~~~ 288 (288)
T cd05061 215 TSLAEQPYQGLSNEQVLKFVMDGGYL-DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF 288 (288)
T ss_pred HhCCCCCCCCCCHHHHHHHHHcCCCC-CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCCCC
Confidence 98 89999888777766666554322 2223457889999999999999999996666655555 999999998
No 153
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-38 Score=299.63 Aligned_cols=259 Identities=24% Similarity=0.428 Sum_probs=219.4
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
..|..+++||+|.||+||++++..+++.||+|.++.+.- +........+|+.+++.++|.|||+++++...+..+-+|+
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddd-degvpssalreicllkelkhknivrl~dvlhsdkkltlvf 80 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCC-CCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeH
Confidence 468888999999999999999999999999999986532 2333456788999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||| ..+|..+...-. +.+..+.++.++.|+++||.|+|++++.||||||.|+||+.+|.+||.|||+++.++.
T Consensus 81 e~c-dqdlkkyfdsln-g~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgi----- 153 (292)
T KOG0662|consen 81 EFC-DQDLKKYFDSLN-GDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGI----- 153 (292)
T ss_pred HHh-hHHHHHHHHhcC-CcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCC-----
Confidence 999 778888876643 4599999999999999999999999999999999999999999999999999976541
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCC-CCChhHHHHHHHHHHHHH-cCCCCCCCCChHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEML-YGYTPFRGKTRQKT 902 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-~~~~sDIwSlG~il~eLl-tG~~Pf~~~~~~~~ 902 (998)
+.+-.+..+.|.+|.+|.++.+.+ |++..|+||.|||+.|+. .|.+.|.+.+..++
T Consensus 154 ----------------------pvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddq 211 (292)
T KOG0662|consen 154 ----------------------PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ 211 (292)
T ss_pred ----------------------ceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHH
Confidence 122334557899999999998865 788999999999999999 59999999999999
Q ss_pred HHHHHhCC-----CCCCCC----------------------CCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCcc
Q 001902 903 FANILHKD-----LKFPSS----------------------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 955 (998)
Q Consensus 903 ~~~i~~~~-----~~~~~~----------------------~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 955 (998)
+++|..-- -.+|.. +.++...++|++++|.-+|.+|++ ++..++||||.
T Consensus 212 lkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qris----aeaalqhpyf~ 287 (292)
T KOG0662|consen 212 LKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRIS----AEAALQHPYFS 287 (292)
T ss_pred HHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccC----HHHHhcCcccc
Confidence 99887521 111111 112334579999999999999999 99999999998
Q ss_pred CC
Q 001902 956 GV 957 (998)
Q Consensus 956 ~~ 957 (998)
.+
T Consensus 288 d~ 289 (292)
T KOG0662|consen 288 DF 289 (292)
T ss_pred cc
Confidence 75
No 154
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-38 Score=353.71 Aligned_cols=262 Identities=22% Similarity=0.289 Sum_probs=214.9
Q ss_pred ccccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC
Q 001902 659 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 738 (998)
Q Consensus 659 ~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 738 (998)
.+.|..+.+.+..+||+|.||+||++++-+ .||||++.... ..++..+.|.+|..++++.+|.||+-+.|++....
T Consensus 386 ~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~-pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~ 461 (678)
T KOG0193|consen 386 EWEIPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDD-PTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPP 461 (678)
T ss_pred ccccCHHHhhccceeccccccceeeccccc---ceEEEEEecCC-CCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCc
Confidence 445666788899999999999999999955 59999998753 45568899999999999999999999999999888
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccC
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 818 (998)
. .||+.+|+|.+|+.+++... ..+.+...+.|++||++|+.|||.++|||||||..||++.++++|||+|||++..-.
T Consensus 462 ~-AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~ 539 (678)
T KOG0193|consen 462 L-AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKT 539 (678)
T ss_pred e-eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeee
Confidence 7 99999999999999998764 569999999999999999999999999999999999999999999999999984321
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC---CCCCChhHHHHHHHHHHHHHcCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTPFR 895 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~---~~~~~~sDIwSlG~il~eLltG~~Pf~ 895 (998)
+.. + ........|...|||||++.. .+|++.+|||||||++|||++|.+||.
T Consensus 540 --------------~w~-g----------~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys 594 (678)
T KOG0193|consen 540 --------------RWS-G----------EQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS 594 (678)
T ss_pred --------------eec-c----------ccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC
Confidence 110 0 111223358899999999964 578899999999999999999999999
Q ss_pred CCChHHHHHHHHhCCC---CCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 896 GKTRQKTFANILHKDL---KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 896 ~~~~~~~~~~i~~~~~---~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
..+...++..+-++-+ .......++.++++|+..||.+++++||.+.+++..|+.+
T Consensus 595 i~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l 653 (678)
T KOG0193|consen 595 IQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEEL 653 (678)
T ss_pred CCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHh
Confidence 5554444443333311 1112244667899999999999999999988877666555
No 155
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=6.1e-37 Score=334.70 Aligned_cols=261 Identities=28% Similarity=0.428 Sum_probs=220.4
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++.+.||.|+||.||+|....++..+++|++....... ....+.+|+.+++.++|+||+++++.+...+..|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT--SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch--HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEE
Confidence 47999999999999999999998899999999987543222 5577889999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
||+++++|.+++..... ..+++..++.++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++.........
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~ 158 (267)
T cd06610 79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDR 158 (267)
T ss_pred eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccc
Confidence 99999999999976432 56899999999999999999999999999999999999999999999999998554311110
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 902 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~ 902 (998)
.........|+..|+|||++... .++.++|+|||||++|+|++|+.||...+....
T Consensus 159 -----------------------~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~ 215 (267)
T cd06610 159 -----------------------TRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV 215 (267)
T ss_pred -----------------------cccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh
Confidence 00122345689999999999776 788899999999999999999999988877666
Q ss_pred HHHHHhCCCC-CCCC---CCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 903 FANILHKDLK-FPSS---TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 903 ~~~i~~~~~~-~~~~---~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
+..+...... ++.. ...+..+.+|+.+||..||++||+ +.+|++||||
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~ll~~p~~ 267 (267)
T cd06610 216 LMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPT----AEELLKHKFF 267 (267)
T ss_pred HHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcC----HHHHhhCCCC
Confidence 6666554322 1111 246788999999999999999999 9999999998
No 156
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.9e-37 Score=354.59 Aligned_cols=251 Identities=25% Similarity=0.403 Sum_probs=201.0
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
..+|++++.||+|+||.||+|.+..+++.||+|+.... ....|+.+++.++|+||+++++++...+..|+|
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 135 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMV 135 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEE
Confidence 45799999999999999999999999999999985432 234589999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
|||+ .++|.+++... ...+++..++.++.||+.||.|||++|||||||||+|||++.++.+||+|||++......
T Consensus 136 ~e~~-~~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 210 (357)
T PHA03209 136 LPHY-SSDLYTYLTKR-SRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA--- 210 (357)
T ss_pred EEcc-CCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccC---
Confidence 9999 56888888654 346899999999999999999999999999999999999999999999999998432100
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCC-CCCCCChH--
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYT-PFRGKTRQ-- 900 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~-Pf~~~~~~-- 900 (998)
.......||+.|+|||++.+..++.++|||||||++|+|+++.. +|......
T Consensus 211 -------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~ 265 (357)
T PHA03209 211 -------------------------PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPE 265 (357)
T ss_pred -------------------------cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHH
Confidence 01123569999999999999999999999999999999997544 44332111
Q ss_pred -------HHHHHHHhC----CCCCC----------------------------CCCCCcHHHHHHHHHccccCccCcCCC
Q 001902 901 -------KTFANILHK----DLKFP----------------------------SSTPTSLHAKQLMYRLLHRDPKSRLGS 941 (998)
Q Consensus 901 -------~~~~~i~~~----~~~~~----------------------------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~ 941 (998)
..+..++.. ...++ .....+..+.+||.+||+.||.+|||
T Consensus 266 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpt- 344 (357)
T PHA03209 266 EYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPS- 344 (357)
T ss_pred HHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcC-
Confidence 111111111 00011 01123556778999999999999999
Q ss_pred hhcHHHHHcCCCccCC
Q 001902 942 HEGANEIKKHPFFKGV 957 (998)
Q Consensus 942 ~~~a~elL~Hp~f~~~ 957 (998)
+.++|+||||+.+
T Consensus 345 ---a~e~l~hp~f~~~ 357 (357)
T PHA03209 345 ---AEEILNYPMFAQL 357 (357)
T ss_pred ---HHHHhcCchhccC
Confidence 9999999999863
No 157
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=5e-37 Score=339.01 Aligned_cols=256 Identities=28% Similarity=0.406 Sum_probs=213.0
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEe------e
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQ------T 736 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~------~ 736 (998)
.+.|++.+.||.|+||.||+|.+..+++.+|+|++... ......+..|+.+++++ +|+||+++++++. .
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~----~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 90 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT----EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGH 90 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC----hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCC
Confidence 35899999999999999999999999999999998643 22345677899999998 7999999999985 3
Q ss_pred CCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccc
Q 001902 737 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 816 (998)
Q Consensus 737 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~ 816 (998)
.+.+|++|||+++++|.+++.......+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++..
T Consensus 91 ~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~ 170 (282)
T cd06636 91 DDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 170 (282)
T ss_pred CCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhh
Confidence 56889999999999999999876556689999999999999999999999999999999999999999999999998754
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhc-----CCCCCChhHHHHHHHHHHHHHcCC
Q 001902 817 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGY 891 (998)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~~sDIwSlG~il~eLltG~ 891 (998)
.... ........|++.|+|||.+. ...++.++|||||||++|+|++|.
T Consensus 171 ~~~~---------------------------~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~ 223 (282)
T cd06636 171 LDRT---------------------------VGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGA 223 (282)
T ss_pred hhcc---------------------------ccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCC
Confidence 3200 01122356899999999986 346778999999999999999999
Q ss_pred CCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 892 TPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 892 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
.||...........+.............+..+.+||.+||..||.+||+ +.+|++||||
T Consensus 224 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~----~~ell~~~~~ 282 (282)
T cd06636 224 PPLCDMHPMRALFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPS----TEQLLKHPFI 282 (282)
T ss_pred CCccccCHHhhhhhHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcC----HHHHhcCCCC
Confidence 9998776555554444333222233346789999999999999999999 9999999997
No 158
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.1e-36 Score=333.34 Aligned_cols=261 Identities=28% Similarity=0.419 Sum_probs=216.3
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccCh------hHHHHHHHHHHHHHhCCCCCccceeEEEeeCCe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR------NKVHRACAEREILDMLDHPFVPALYASFQTKTH 739 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~------~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 739 (998)
+|.+...||.|++|.||+|.+..+++.+|+|.+........ .....+.+|+.++++++||||+++++++...+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 47788999999999999999988999999998875433221 234567889999999999999999999999999
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCC
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 819 (998)
.++||||+++++|.+++... ..+++..+..++.|++.||.|||++|++||||+|+||+++.++.++|+|||++.....
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEA 158 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccccc
Confidence 99999999999999999765 4589999999999999999999999999999999999999999999999999865431
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCCh
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 899 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~ 899 (998)
.... ...........|+..|+|||.+.+..++.++|+|||||++|+|++|..||.+.+.
T Consensus 159 ~~~~---------------------~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~ 217 (267)
T cd06628 159 NSLS---------------------TKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ 217 (267)
T ss_pred cccc---------------------CCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH
Confidence 1100 0001112235688999999999988899999999999999999999999988766
Q ss_pred HHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 900 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 900 ~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
...+..+..... .......+..+.++|.+||+.||.+||+ +.++++||||
T Consensus 218 ~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~ 267 (267)
T cd06628 218 LQAIFKIGENAS-PEIPSNISSEAIDFLEKTFEIDHNKRPT----AAELLKHPFL 267 (267)
T ss_pred HHHHHHHhccCC-CcCCcccCHHHHHHHHHHccCCchhCcC----HHHHhhCCCC
Confidence 555555444221 1122346788999999999999999999 9999999997
No 159
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.2e-36 Score=330.70 Aligned_cols=256 Identities=28% Similarity=0.477 Sum_probs=223.6
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
+|++++.||.|+||.||.+.+..+++.+++|.+..... .......+.+|+.++++++|+||+++++++...+.++++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRL-SEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeeccc-chhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence 48999999999999999999999999999999875432 23445677899999999999999999999999999999999
Q ss_pred cCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCC
Q 001902 746 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 825 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 825 (998)
|+++++|.+++.+.....+++..+..++.|++.+|.|||+.|++|+||+|+||+++.++.+||+|||++.......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~---- 155 (256)
T cd08221 80 YANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY---- 155 (256)
T ss_pred ecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccccc----
Confidence 9999999999987655668999999999999999999999999999999999999999999999999985432111
Q ss_pred CcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001902 826 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 905 (998)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~ 905 (998)
.......|++.|+|||++.+..++.++|||||||++|+|++|..||...+..+....
T Consensus 156 -----------------------~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~ 212 (256)
T cd08221 156 -----------------------SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVK 212 (256)
T ss_pred -----------------------ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence 012245689999999999888889999999999999999999999999888888877
Q ss_pred HHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 906 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 906 i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
+..+.... .....+.++.+++.+||..+|.+||+ +.++++|||+
T Consensus 213 ~~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~R~s----~~~ll~~~~l 256 (256)
T cd08221 213 IVQGNYTP-VVSVYSSELISLVHSLLQQDPEKRPT----ADEVLDQPLL 256 (256)
T ss_pred HHcCCCCC-CccccCHHHHHHHHHHcccCcccCCC----HHHHhhCcCC
Confidence 77665443 23456889999999999999999999 9999999996
No 160
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=7.2e-37 Score=343.93 Aligned_cols=251 Identities=27% Similarity=0.438 Sum_probs=193.3
Q ss_pred ccccCCCCceeEEEEEEc--cCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEee--CCeEEEEEe
Q 001902 670 IKPLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTHVCLITD 745 (998)
Q Consensus 670 ~~~LG~G~~g~Vy~a~~~--~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~~~~lV~E 745 (998)
.++||+|+||.||+|.++ .+++.||+|.+.... ......+|+.+++.++||||+++++++.. ...+|+|||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-----ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-----CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEe
Confidence 368999999999999975 467899999986532 12346789999999999999999998853 567899999
Q ss_pred cCCCCchhHHHhhC-------CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEe----cCCcEEEEeccCc
Q 001902 746 YCPGGELFLLLDRQ-------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ----GNGHVSLTDFDLS 814 (998)
Q Consensus 746 ~~~ggsL~~~l~~~-------~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~----~~g~vkL~DFG~a 814 (998)
|+ +++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 81 ~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 81 YA-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred cc-CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 99 56888877532 123589999999999999999999999999999999999994 5678999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCC
Q 001902 815 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTP 893 (998)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~P 893 (998)
........ .........||+.|+|||++.+. .++.++|||||||++|+|++|.+|
T Consensus 160 ~~~~~~~~------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~ 215 (317)
T cd07868 160 RLFNSPLK------------------------PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPI 215 (317)
T ss_pred eccCCCCc------------------------cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCC
Confidence 65431100 01112345789999999999874 578899999999999999999999
Q ss_pred CCCCCh---------HHHHHHHHhCC-C----------CCC-------------------------CCCCCcHHHHHHHH
Q 001902 894 FRGKTR---------QKTFANILHKD-L----------KFP-------------------------SSTPTSLHAKQLMY 928 (998)
Q Consensus 894 f~~~~~---------~~~~~~i~~~~-~----------~~~-------------------------~~~~~s~~l~~Ll~ 928 (998)
|.+... ...+..+.... . ..+ .....+..+.+||.
T Consensus 216 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~ 295 (317)
T cd07868 216 FHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQ 295 (317)
T ss_pred ccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHH
Confidence 965332 11122221100 0 000 00123456889999
Q ss_pred HccccCccCcCCChhcHHHHHcCCCc
Q 001902 929 RLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 929 ~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
+||+.||.+||| ++++|+||||
T Consensus 296 ~mL~~dP~~R~t----~~e~l~hp~f 317 (317)
T cd07868 296 KLLTMDPIKRIT----SEQAMQDPYF 317 (317)
T ss_pred HHhccCcccCCC----HHHHhcCCCC
Confidence 999999999999 9999999998
No 161
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=5.9e-37 Score=335.50 Aligned_cols=254 Identities=25% Similarity=0.402 Sum_probs=211.9
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.++|++.+.||+|+||.||++.+..+++.||+|++.... ......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv 84 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP---GDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWIC 84 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc---cchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEE
Confidence 468999999999999999999999999999999987432 22345677899999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
|||+++++|.+++... ..+++..+..++.|++.||.|||+.||+|+||||+||+++.++.++|+|||++......
T Consensus 85 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~--- 159 (267)
T cd06646 85 MEYCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITAT--- 159 (267)
T ss_pred EeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeeccc---
Confidence 9999999999998764 45899999999999999999999999999999999999999999999999998543210
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhc---CCCCCChhHHHHHHHHHHHHHcCCCCCCCCChH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 900 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~ 900 (998)
........|++.|+|||.+. ...++.++|+|||||++|+|++|..||......
T Consensus 160 ------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~ 215 (267)
T cd06646 160 ------------------------IAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPM 215 (267)
T ss_pred ------------------------ccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchh
Confidence 01122346889999999984 345778999999999999999999999766554
Q ss_pred HHHHHHHhCCCCCC---CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCC
Q 001902 901 KTFANILHKDLKFP---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 953 (998)
Q Consensus 901 ~~~~~i~~~~~~~~---~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~ 953 (998)
.....+.......+ .....+..+.+||.+||+.+|++||+ ++++++|+|
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~----~~~il~~l~ 267 (267)
T cd06646 216 RALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPT----AERLLTHLF 267 (267)
T ss_pred hhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcC----HHHHhcCCC
Confidence 44433333333222 22345788999999999999999999 999999987
No 162
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5.7e-37 Score=341.65 Aligned_cols=256 Identities=25% Similarity=0.416 Sum_probs=215.9
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
.+|.+++.||+|+||.||++.+..+++.||+|.+..... .....+.+|+.+++.++|+||+++++++...+..|+||
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 95 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 95 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc---chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEee
Confidence 689999999999999999999999999999999875422 23456788999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||+++++|.+++.+ ..+++..+..++.|++.||.|||+.||+|+||||+|||++.++.++|+|||++.......
T Consensus 96 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~--- 169 (297)
T cd06656 96 EYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--- 169 (297)
T ss_pred cccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCc---
Confidence 99999999999865 348899999999999999999999999999999999999999999999999885432110
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 904 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~ 904 (998)
.......|++.|+|||.+.+..++.++|+|||||++|+|++|..||.+.+......
T Consensus 170 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~ 225 (297)
T cd06656 170 ------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY 225 (297)
T ss_pred ------------------------cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee
Confidence 01123468899999999999889999999999999999999999998766543333
Q ss_pred HHHhC-CCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 905 NILHK-DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 905 ~i~~~-~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
.+... ..........+..+.+|+.+||..+|.+||+ +.++++||||+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il~~~~~~~~ 275 (297)
T cd06656 226 LIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGS----AKELLQHPFLKLA 275 (297)
T ss_pred eeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcC----HHHHhcCchhccc
Confidence 22222 1222223446778899999999999999999 9999999999864
No 163
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=8.4e-37 Score=340.12 Aligned_cols=256 Identities=25% Similarity=0.411 Sum_probs=217.0
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
.+|++++.||+|+||.||++.+..+++.|++|.+..... .....+.+|+.+++.++|+||+++++.+......|+||
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~ 96 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEee
Confidence 589999999999999999999999999999999875432 23466788999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||+++++|.+++.. ..++...+..++.|++.||.|||++||+|+||||+|||++.++.++|+|||++.......
T Consensus 97 e~~~~~~L~~~~~~---~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~--- 170 (296)
T cd06654 97 EYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--- 170 (296)
T ss_pred cccCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccc---
Confidence 99999999999865 347899999999999999999999999999999999999999999999999885432110
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 904 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~ 904 (998)
.......|++.|+|||.+.+..++.++|||||||++|+|++|+.||...+......
T Consensus 171 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~ 226 (296)
T cd06654 171 ------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY 226 (296)
T ss_pred ------------------------cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHH
Confidence 01123468899999999998888999999999999999999999998877654444
Q ss_pred HHHhCC-CCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 905 NILHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 905 ~i~~~~-~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
.+.... ...+.....+..+.+|+.+||..+|.+||+ +.++++||||...
T Consensus 227 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~eil~~~~~~~~ 276 (296)
T cd06654 227 LIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGS----AKELLQHQFLKIA 276 (296)
T ss_pred HHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcC----HHHHhhChhhhcc
Confidence 333322 222233446788999999999999999999 9999999999864
No 164
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.1e-36 Score=331.22 Aligned_cols=256 Identities=25% Similarity=0.490 Sum_probs=221.3
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
+|++++.||.|+||.||++.+..+|+.||+|.+..... .......+.+|+.++++++|+||+++++++...+..|+|||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKM-SPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD 79 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhC-ChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence 58999999999999999999999999999999875432 23344678889999999999999999999999999999999
Q ss_pred cCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCC
Q 001902 746 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 825 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 825 (998)
|+++++|.+++.......+++..+..++.|++.||.|||++|++|+||+|+|||++.++.++|+|||++......
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~----- 154 (256)
T cd08218 80 YCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNST----- 154 (256)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcc-----
Confidence 999999999997654456899999999999999999999999999999999999999999999999988543210
Q ss_pred CcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001902 826 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 905 (998)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~ 905 (998)
........|++.|+|||++.+..++.++|+|||||++|+|++|..||...+.......
T Consensus 155 ----------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~ 212 (256)
T cd08218 155 ----------------------VELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLK 212 (256)
T ss_pred ----------------------hhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHH
Confidence 0011234588899999999988889999999999999999999999998888777777
Q ss_pred HHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 906 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 906 i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
+..+... +.....+..+.++|.+||+.+|.+||+ +.++++||||
T Consensus 213 ~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~vl~~~~~ 256 (256)
T cd08218 213 IIRGSYP-PVSSHYSYDLRNLVSQLFKRNPRDRPS----VNSILEKNFI 256 (256)
T ss_pred HhcCCCC-CCcccCCHHHHHHHHHHhhCChhhCcC----HHHHhhCcCC
Confidence 7665543 223456788999999999999999999 9999999998
No 165
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.3e-36 Score=332.83 Aligned_cols=259 Identities=26% Similarity=0.393 Sum_probs=212.0
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeeccccc--ChhHHHHHHHHHHHHHhCCCCCccceeEEEee--CCeEE
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--NRNKVHRACAEREILDMLDHPFVPALYASFQT--KTHVC 741 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~--~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~~~~ 741 (998)
.|++.+.||+|+||.||+|.+..+++.|++|.+...... .......+.+|+.+++.++||||+++++++.. ...++
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 689999999999999999999999999999998754321 22345678889999999999999999998865 46789
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 821 (998)
++|||+++++|.+++... ..++...++.++.||+.||.|||+++|+|+||||+||+++.++.++|+|||++.......
T Consensus 83 l~~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~ 160 (266)
T cd06651 83 IFMEYMPGGSVKDQLKAY--GALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTIC 160 (266)
T ss_pred EEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccccccc
Confidence 999999999999999764 348999999999999999999999999999999999999999999999999985432100
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHH
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 901 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~ 901 (998)
. .........++..|+|||++.+..++.++|||||||++|+|++|+.||.......
T Consensus 161 ~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~ 216 (266)
T cd06651 161 M------------------------SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA 216 (266)
T ss_pred c------------------------cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHH
Confidence 0 0001123458899999999998889999999999999999999999998876655
Q ss_pred HHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCcc
Q 001902 902 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 955 (998)
Q Consensus 902 ~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 955 (998)
....+.............+..+.+|+ +||..+|.+||+ ++++++||||+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~----~~eil~hp~~~ 265 (266)
T cd06651 217 AIFKIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPS----AEELLRHPFAQ 265 (266)
T ss_pred HHHHHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcC----HHHHhcCcccc
Confidence 55544433222111233577888888 677789999999 99999999996
No 166
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.3e-36 Score=332.41 Aligned_cols=261 Identities=23% Similarity=0.342 Sum_probs=215.2
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeeccccc---ChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEE
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML---NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 742 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~---~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 742 (998)
+|++.+.||.|+||.||+|.. .+++.+|+|.+...... .......+.+|+.+++.++|+||+++++++...+.+++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 79 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI 79 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence 488899999999999999987 57889999988754221 22334668889999999999999999999999999999
Q ss_pred EEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCC
Q 001902 743 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 822 (998)
Q Consensus 743 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 822 (998)
||||+++++|.+++.+. ..+++..+..++.|++.||+|||+.+|+|+||+|+||+++.++.++|+|||++........
T Consensus 80 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 157 (265)
T cd06631 80 FMEFVPGGSISSILNRF--GPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGL 157 (265)
T ss_pred EEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccc
Confidence 99999999999999764 3589999999999999999999999999999999999999999999999998854321100
Q ss_pred CCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001902 823 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 902 (998)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~ 902 (998)
. ...........|+..|+|||++.+..++.++|+|||||++|+|++|..||...+....
T Consensus 158 ~---------------------~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~ 216 (265)
T cd06631 158 H---------------------GTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAA 216 (265)
T ss_pred c---------------------ccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHH
Confidence 0 0001112345689999999999998899999999999999999999999988766555
Q ss_pred HHHHHhCCCC-CCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 903 FANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 903 ~~~i~~~~~~-~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
...+...... .+.....+..+.+||.+||..+|.+||+ +.++++||||
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~----~~~~l~~~~~ 265 (265)
T cd06631 217 MFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPS----ALQLLRHDFL 265 (265)
T ss_pred HHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCC----HHHHhcCCCC
Confidence 4444433212 2233456888999999999999999999 9999999997
No 167
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.3e-36 Score=336.14 Aligned_cols=256 Identities=27% Similarity=0.424 Sum_probs=210.7
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++.+.||+|+||.||++.+..+++.||+|++..... .......+.+|+.+++.++|+||+++++++.....+++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESED-DPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVF 79 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeeccc-CccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEE
Confidence 479999999999999999999998999999999875421 2223345678999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||+++++|..++... ..+++..++.++.||+.||.|||+.||+|+||||+||+++.++.++|+|||++.......
T Consensus 80 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--- 154 (286)
T cd07847 80 EYCDHTVLNELEKNP--RGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPG--- 154 (286)
T ss_pred eccCccHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCc---
Confidence 999998888877553 358999999999999999999999999999999999999999999999999985532110
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 903 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~ 903 (998)
.......++..|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+..
T Consensus 155 ------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~ 210 (286)
T cd07847 155 ------------------------DDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQL 210 (286)
T ss_pred ------------------------ccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence 01123457889999999876 45788999999999999999999999887765554
Q ss_pred HHHHhCC-------------------CCCCC----------CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 904 ANILHKD-------------------LKFPS----------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 904 ~~i~~~~-------------------~~~~~----------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
..+.... ...+. ....+..+.+|+.+||+.+|++||+ +.+++.||||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~eil~~~~f 286 (286)
T cd07847 211 YLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLS----CEELLEHPYF 286 (286)
T ss_pred HHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCC----HHHHhcCCCC
Confidence 4433210 00111 1234678899999999999999999 9999999998
No 168
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.4e-36 Score=338.44 Aligned_cols=256 Identities=26% Similarity=0.437 Sum_probs=219.3
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
.+|++.+.||.|++|.||++.+..+++.|++|.+.... ......+.+|+.+++.++|+||+++++++...+.+|+||
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 95 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK---QPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVM 95 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc---CchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEE
Confidence 47999999999999999999999999999999987532 233467788999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||+++++|..++... .+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 96 e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~--- 169 (296)
T cd06655 96 EYLAGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ--- 169 (296)
T ss_pred EecCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhccccc---
Confidence 999999999988653 48999999999999999999999999999999999999999999999999875432110
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 904 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~ 904 (998)
.......|++.|+|||.+.+..++.++|||||||++|+|++|..||.+.+......
T Consensus 170 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~ 225 (296)
T cd06655 170 ------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY 225 (296)
T ss_pred ------------------------ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 01123468899999999998889999999999999999999999999887766555
Q ss_pred HHHhCCC-CCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 905 NILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 905 ~i~~~~~-~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
.+..... .+.....++..+.+||.+||..||.+||+ +.+++.||||+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt----~~~il~~~~~~~~ 275 (296)
T cd06655 226 LIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGS----AKELLQHPFLKLA 275 (296)
T ss_pred HHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCC----HHHHhhChHhhhc
Confidence 5543322 22233456888999999999999999999 9999999999865
No 169
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=4.3e-37 Score=334.86 Aligned_cols=255 Identities=38% Similarity=0.725 Sum_probs=217.7
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
+|++.+.||.|+||.||+|.+..+++.||+|++.+.........+.+.+|+.++++++||||+++++++......|+|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 48899999999999999999998999999999987655454567788999999999999999999999999999999999
Q ss_pred cCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCC
Q 001902 746 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 825 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 825 (998)
|+.|++|.+++... ..+++..+..++.||++||.|||++|++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~----- 153 (258)
T cd05578 81 LLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPD----- 153 (258)
T ss_pred CCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCC-----
Confidence 99999999999775 46899999999999999999999999999999999999999999999999988543211
Q ss_pred CcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCCh--HHHH
Q 001902 826 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR--QKTF 903 (998)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~--~~~~ 903 (998)
.......|+..|+|||++....++.++|+||||+++|+|++|..||...+. ...+
T Consensus 154 -----------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~ 210 (258)
T cd05578 154 -----------------------TLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQI 210 (258)
T ss_pred -----------------------ccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHH
Confidence 011234588899999999888899999999999999999999999988764 3333
Q ss_pred HHHHh-CCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 904 ANILH-KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 904 ~~i~~-~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
..... .....+ ...+..+.++|.+||..||.+||++. +.++++||||
T Consensus 211 ~~~~~~~~~~~~--~~~~~~~~~~i~~~l~~~p~~R~~~~--~~~l~~~~~~ 258 (258)
T cd05578 211 RAKQETADVLYP--ATWSTEAIDAINKLLERDPQKRLGDN--LKDLKNHPYF 258 (258)
T ss_pred HHHhccccccCc--ccCcHHHHHHHHHHccCChhHcCCcc--HHHHhcCCCC
Confidence 33333 222233 34678999999999999999999932 3999999998
No 170
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-38 Score=347.97 Aligned_cols=247 Identities=26% Similarity=0.427 Sum_probs=215.9
Q ss_pred ccccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC
Q 001902 659 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 738 (998)
Q Consensus 659 ~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 738 (998)
.+++..+....++.||+|+-|.||+++. .++.||||.++ +.-..+|+-|++|+|+||+.+.++|....
T Consensus 118 ~WeiPFe~IsELeWlGSGaQGAVF~Grl--~netVAVKKV~----------elkETdIKHLRkLkH~NII~FkGVCtqsP 185 (904)
T KOG4721|consen 118 LWEIPFEEISELEWLGSGAQGAVFLGRL--HNETVAVKKVR----------ELKETDIKHLRKLKHPNIITFKGVCTQSP 185 (904)
T ss_pred hccCCHHHhhhhhhhccCcccceeeeec--cCceehhHHHh----------hhhhhhHHHHHhccCcceeeEeeeecCCc
Confidence 3455556667788999999999999997 57899999765 22345788999999999999999999999
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccC
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 818 (998)
.+|||||||..|.|+.+|+.. ..++...+..|..+|+.|+.|||.+.|||||||.-||||+.+..|||+|||-++...
T Consensus 186 cyCIiMEfCa~GqL~~VLka~--~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~ 263 (904)
T KOG4721|consen 186 CYCIIMEFCAQGQLYEVLKAG--RPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELS 263 (904)
T ss_pred eeEEeeeccccccHHHHHhcc--CccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhh
Confidence 999999999999999999764 568999999999999999999999999999999999999999999999999885533
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 898 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~ 898 (998)
. ....-+++||..|||||++...+.+.|+||||||++||||+||..||..-+
T Consensus 264 ~----------------------------~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVd 315 (904)
T KOG4721|consen 264 D----------------------------KSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVD 315 (904)
T ss_pred h----------------------------hhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccc
Confidence 1 123346899999999999999999999999999999999999999999988
Q ss_pred hHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 899 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 899 ~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
...++.-+-...+.+|-...++..++=||+.||.-.|.+||+ .++||.|
T Consensus 316 ssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPS----Frqil~H 364 (904)
T KOG4721|consen 316 SSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPS----FRQILLH 364 (904)
T ss_pred hheeEEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCcc----HHHHHHH
Confidence 777766665666777777778888999999999999999999 6677777
No 171
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-38 Score=351.99 Aligned_cols=251 Identities=27% Similarity=0.417 Sum_probs=212.2
Q ss_pred ccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEecCCCCc
Q 001902 672 PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGE 751 (998)
Q Consensus 672 ~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ggs 751 (998)
.||+|.||+||-+++..|...+|||.+... +....+-+..||.+.++|+|.|||++++.+..++++-|.||.++||+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpek---dsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS 658 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEK---DSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGS 658 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccc---cchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence 489999999999999999999999998743 34456678889999999999999999999999999999999999999
Q ss_pred hhHHHhhCCCCCC--CHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEe-cCCcEEEEeccCccccCCCCCCCCCcc
Q 001902 752 LFLLLDRQPTKVL--KEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-GNGHVSLTDFDLSCLTSCKPQLLLPTT 828 (998)
Q Consensus 752 L~~~l~~~~~~~l--~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~-~~g~vkL~DFG~a~~~~~~~~~~~~~~ 828 (998)
|.+++.... +++ ++..+..+.+||++||.|||.+.|||||||-+||||+ -.|.+||+|||-++.+.
T Consensus 659 LSsLLrskW-GPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA---------- 727 (1226)
T KOG4279|consen 659 LSSLLRSKW-GPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA---------- 727 (1226)
T ss_pred HHHHHHhcc-CCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhc----------
Confidence 999998764 445 8889999999999999999999999999999999998 47999999999886532
Q ss_pred hhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC--CCCChhHHHHHHHHHHHHHcCCCCCCCCCh-HHHHHH
Q 001902 829 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA--GHTSAVDWWALGILLYEMLYGYTPFRGKTR-QKTFAN 905 (998)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~--~~~~~sDIwSlG~il~eLltG~~Pf~~~~~-~~~~~~ 905 (998)
.-.....++.||..|||||++..+ +|+.++|||||||++.||.||++||..... ...+.+
T Consensus 728 -----------------ginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFk 790 (1226)
T KOG4279|consen 728 -----------------GINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFK 790 (1226)
T ss_pred -----------------cCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhh
Confidence 112234577899999999999765 588899999999999999999999976543 222222
Q ss_pred HHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 906 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 906 i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
+--.....|-...+|.+++.||.+|+.++|..||+ |.+||..||++.-
T Consensus 791 VGmyKvHP~iPeelsaeak~FilrcFepd~~~R~s----A~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 791 VGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPS----AKDLLQDPFLQHN 838 (1226)
T ss_pred hcceecCCCCcHHHHHHHHHHHHHHcCCCcccCcc----HHHhccCcccccC
Confidence 22222333444457889999999999999999999 9999999999863
No 172
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=4.7e-37 Score=339.50 Aligned_cols=255 Identities=23% Similarity=0.422 Sum_probs=205.9
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
+|++++.||.|+||.||+|.+..+|+.||+|.+..... .......+.+|+.+++.++|+||+++++++.+.+..|+|||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFE 79 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc-cccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEe
Confidence 48899999999999999999999999999999875422 22233556789999999999999999999999999999999
Q ss_pred cCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCC
Q 001902 746 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 825 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 825 (998)
|++ ++|.+++... ...+++..++.++.||++||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 80 ~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~----- 152 (284)
T cd07839 80 YCD-QDLKKYFDSC-NGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP----- 152 (284)
T ss_pred cCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCC-----
Confidence 995 5788877654 245999999999999999999999999999999999999999999999999998543211
Q ss_pred CcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCCC-CCCChHHHH
Q 001902 826 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPF-RGKTRQKTF 903 (998)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf-~~~~~~~~~ 903 (998)
........+++.|+|||++.+. .++.++|||||||++|+|++|..|| .+.+....+
T Consensus 153 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~ 210 (284)
T cd07839 153 ----------------------VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQL 210 (284)
T ss_pred ----------------------CCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHH
Confidence 0111234578899999998774 4688999999999999999988885 444444444
Q ss_pred HHHHhCC--------------CC---CC----------CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 904 ANILHKD--------------LK---FP----------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 904 ~~i~~~~--------------~~---~~----------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
..+.... .. ++ ....++.++.+||.+||..||.+||| +.++++||||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t----~~~il~h~~f 284 (284)
T cd07839 211 KRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRIS----AEEALQHPYF 284 (284)
T ss_pred HHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCC----HHHHhcCCCC
Confidence 4332210 00 00 11235778899999999999999999 9999999998
No 173
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=9.2e-37 Score=333.28 Aligned_cols=257 Identities=28% Similarity=0.453 Sum_probs=216.6
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++.+.||.|++|.||+|.+..+++.+++|.+.... .......+.+|+.+++.++||||+++++.+...+.++++|
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEI--NEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICM 78 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEeccc--ChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEE
Confidence 36889999999999999999999999999999987653 2345567888999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
||+++++|.+++.... ..+++..+..++.||+.||+|||+ .|++|+||||+||+++.++.++|+|||.+......
T Consensus 79 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~--- 154 (265)
T cd06605 79 EYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS--- 154 (265)
T ss_pred EecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHH---
Confidence 9999999999997653 568999999999999999999999 99999999999999999999999999987432100
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCC-----C
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK-----T 898 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~-----~ 898 (998)
......++..|+|||.+.+..++.++|||||||++|+|++|..||... .
T Consensus 155 --------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~ 208 (265)
T cd06605 155 --------------------------LAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDG 208 (265)
T ss_pred --------------------------HhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccccc
Confidence 001156888999999999999999999999999999999999999764 2
Q ss_pred hHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 899 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 899 ~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
.......+.....+.......+..+.+||.+||..||.+||| +.+++.||||+..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~ll~~~~~~~~ 263 (265)
T cd06605 209 IFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPS----YKELLEHPFIKKY 263 (265)
T ss_pred HHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcC----HHHHhhCchhhcc
Confidence 233344444432221111226888999999999999999999 9999999999864
No 174
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=2.1e-36 Score=329.71 Aligned_cols=254 Identities=28% Similarity=0.452 Sum_probs=216.7
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++.+.||.|+||.||+|.+..+++.+++|++... .......+.+|+.+++.++||||+++++++...+.+|++|
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~ 79 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLE---PGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVM 79 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcC---chhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEE
Confidence 5799999999999999999999889999999999754 2235577889999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||+++++|.+++... ...+++..+..++.|++.||.|||++||+|+||+|+||+++.++.++|+|||++......
T Consensus 80 e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~---- 154 (262)
T cd06613 80 EYCGGGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTAT---- 154 (262)
T ss_pred eCCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhh----
Confidence 999999999998764 245899999999999999999999999999999999999999999999999988543210
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC---CCCChhHHHHHHHHHHHHHcCCCCCCCCChHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA---GHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 901 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~---~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~ 901 (998)
........++..|+|||.+.+. .++.++|+|||||++|+|++|.+||.+.+...
T Consensus 155 -----------------------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~ 211 (262)
T cd06613 155 -----------------------IAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMR 211 (262)
T ss_pred -----------------------hhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 0112235688999999999776 78889999999999999999999999887666
Q ss_pred HHHHHHhCCCCCCC---CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCC
Q 001902 902 TFANILHKDLKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 953 (998)
Q Consensus 902 ~~~~i~~~~~~~~~---~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~ 953 (998)
....+....+..+. ....+.++.+|+.+||..+|..||| +.+++.|+|
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~il~~~~ 262 (262)
T cd06613 212 ALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPT----ATKLLQHPF 262 (262)
T ss_pred HHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCC----HHHHhcCCC
Confidence 66555554332221 2234678999999999999999999 999999998
No 175
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=2.1e-36 Score=334.27 Aligned_cols=257 Identities=30% Similarity=0.496 Sum_probs=214.0
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
+|++.+.||.|+||.||+|.+..+|+.||+|++..... .......+.+|+.+++.++|+||+++++++......|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 79 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRL-EGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVME 79 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccc-cchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEec
Confidence 58899999999999999999998999999999876532 23345678889999999999999999999999999999999
Q ss_pred cCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCC
Q 001902 746 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 825 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 825 (998)
|+ +++|.+++.... ..+++..++.++.||+.||.|||+.||+|+||||+||+++.++.++|+|||++........
T Consensus 80 ~~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~--- 154 (286)
T cd07832 80 YM-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP--- 154 (286)
T ss_pred cc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC---
Confidence 99 999999987643 5699999999999999999999999999999999999999999999999999855431110
Q ss_pred CcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001902 826 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 904 (998)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~ 904 (998)
.......|+..|+|||++.+. .++.++|||||||++|+|++|.+||.+......+.
T Consensus 155 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~ 211 (286)
T cd07832 155 -----------------------RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLA 211 (286)
T ss_pred -----------------------CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHH
Confidence 112234689999999998664 46889999999999999999999998877666555
Q ss_pred HHHhCC-------------------CCCCCC---------CCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCcc
Q 001902 905 NILHKD-------------------LKFPSS---------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 955 (998)
Q Consensus 905 ~i~~~~-------------------~~~~~~---------~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 955 (998)
.+.... ..++.. ...+..+.+||.+||..+|.+||+ ++++++||||.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~----~~~~l~h~~~~ 286 (286)
T cd07832 212 IVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLS----AAEALRHPYFT 286 (286)
T ss_pred HHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCC----HHHHhhCcCcC
Confidence 544310 011111 234678899999999999999999 99999999984
No 176
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=3.1e-36 Score=369.60 Aligned_cols=151 Identities=39% Similarity=0.653 Sum_probs=139.4
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
+++|.+++.||+|+||.||+|.+..+++.||||+++............+..|+.+++.++|+||++++.++...+++|||
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 46899999999999999999999989999999999876555566667888999999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccc
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 816 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~ 816 (998)
|||+.|++|.+++... ..+++..++.|+.||+.||.|||.+|||||||||+||||+.++.+||+|||+++.
T Consensus 83 mEy~~g~~L~~li~~~--~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 83 MEYLIGGDVKSLLHIY--GYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred EeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 9999999999999764 4589999999999999999999999999999999999999999999999999864
No 177
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=2e-36 Score=328.73 Aligned_cols=253 Identities=28% Similarity=0.451 Sum_probs=215.4
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++.+.||.|+||.||++.+..+++.|++|.+.... ....+.+|+.+++.++|+||+++++++.....+|++|
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~ 77 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-----DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVM 77 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH-----HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEE
Confidence 57999999999999999999998889999999987542 2577889999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||+++++|.+++... ...+++..++.++.|++.||.|||+.+|+|+||+|+||+++.++.++|+|||++.......
T Consensus 78 e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~--- 153 (256)
T cd06612 78 EYCGAGSVSDIMKIT-NKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM--- 153 (256)
T ss_pred ecCCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCc---
Confidence 999999999998654 2458999999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 904 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~ 904 (998)
.......|+..|+|||++.+..++.++||||||+++|+|++|..||..........
T Consensus 154 ------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~ 209 (256)
T cd06612 154 ------------------------AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF 209 (256)
T ss_pred ------------------------cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh
Confidence 01223458889999999999899999999999999999999999998776654443
Q ss_pred HHHhCCC-CCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 905 NILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 905 ~i~~~~~-~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
.+..... .+......+..+.+||.+||..||.+||| +.++|.||||
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps----~~~il~~~~~ 256 (256)
T cd06612 210 MIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPS----AIQLLQHPFI 256 (256)
T ss_pred hhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcC----HHHHhcCCCC
Confidence 3332211 12222345678999999999999999999 9999999997
No 178
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=2.6e-36 Score=327.74 Aligned_cols=255 Identities=28% Similarity=0.476 Sum_probs=219.2
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
+|++.+.||+|+||.||+|.+..+++.+|+|.+..... .......+.+|+.+++.++||||+++++.+...+..++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM-TKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVME 79 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccc-ccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEe
Confidence 48899999999999999999999999999999876533 33446778899999999999999999999999999999999
Q ss_pred cCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecC-CcEEEEeccCccccCCCCCCC
Q 001902 746 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~-g~vkL~DFG~a~~~~~~~~~~ 824 (998)
|+++++|.+++.......+++..+..++.+++.+|.|||++||+|+||+|+||+++.+ +.++|+|||++......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~---- 155 (256)
T cd08220 80 YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK---- 155 (256)
T ss_pred cCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC----
Confidence 9999999999987655668999999999999999999999999999999999999855 46899999998543211
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 904 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~ 904 (998)
.......|+..|+|||.+.+..++.++||||||+++|+|++|..||.+.+......
T Consensus 156 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~ 211 (256)
T cd08220 156 ------------------------SKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVL 211 (256)
T ss_pred ------------------------ccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHH
Confidence 01123468899999999998888999999999999999999999999887776666
Q ss_pred HHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 905 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 905 ~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
.+...... +.....+..+.+++.+||..+|.+||| +.++++||||
T Consensus 212 ~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~ll~~p~~ 256 (256)
T cd08220 212 KIMSGTFA-PISDRYSPDLRQLILSMLNLDPSKRPQ----LSQIMAQPIC 256 (256)
T ss_pred HHHhcCCC-CCCCCcCHHHHHHHHHHccCChhhCCC----HHHHhhCCCC
Confidence 66554332 223346889999999999999999999 9999999997
No 179
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=2.3e-36 Score=331.04 Aligned_cols=252 Identities=18% Similarity=0.262 Sum_probs=208.8
Q ss_pred cccCCcccccccCCCCceeEEEEEEc---cCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 738 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~---~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 738 (998)
+...+|++.+.||+|+||.||++.+. ..+..+|+|.++... .......+.+|+.++++++||||+++++++...+
T Consensus 2 i~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 79 (266)
T cd05064 2 LDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC--SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGN 79 (266)
T ss_pred CchHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCC
Confidence 34567999999999999999999875 446789999987542 2334567889999999999999999999999999
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccC
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 818 (998)
..|+||||+++++|.+++.... ..+++..++.++.||+.||+|||++|++||||||+|||++.++.++|+|||.+....
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~ 158 (266)
T cd05064 80 TMMIVTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDK 158 (266)
T ss_pred CcEEEEEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCccccccc
Confidence 9999999999999999997653 458999999999999999999999999999999999999999999999999764321
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 897 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~ 897 (998)
... ........++..|+|||++.+..++.++|||||||++|+|++ |..||.+.
T Consensus 159 ~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~ 212 (266)
T cd05064 159 SEA--------------------------IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDM 212 (266)
T ss_pred ccc--------------------------hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcC
Confidence 000 001112345678999999999999999999999999999775 99999988
Q ss_pred ChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChh
Q 001902 898 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 943 (998)
Q Consensus 898 ~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 943 (998)
+....+..+... ...+....++..+.+++.+||..+|.+||++.+
T Consensus 213 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~ 257 (266)
T cd05064 213 SGQDVIKAVEDG-FRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQ 257 (266)
T ss_pred CHHHHHHHHHCC-CCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHH
Confidence 877776666544 333444557888999999999999999999433
No 180
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=3.2e-36 Score=329.47 Aligned_cols=260 Identities=25% Similarity=0.367 Sum_probs=213.7
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccc--cChhHHHHHHHHHHHHHhCCCCCccceeEEEee--CCeE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--LNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTHV 740 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~--~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~~~ 740 (998)
.+|++.+.||+|+||.||++.+..+++.||+|.+..... ........+.+|+.+++.++||||+++++++.. ...+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 479999999999999999999999999999998864321 123345678889999999999999999998875 3578
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
++||||+++++|.+++.+. ..+++..+..++.|++.||.|||+++|+|+||||+||+++.++.++|+|||++......
T Consensus 82 ~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~ 159 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY--GALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTI 159 (265)
T ss_pred EEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccc
Confidence 8999999999999998764 34889999999999999999999999999999999999999999999999988543210
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChH
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 900 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~ 900 (998)
.. .........|+..|+|||++.+..++.++|||||||++|+|++|+.||......
T Consensus 160 ~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~ 215 (265)
T cd06652 160 CL------------------------SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM 215 (265)
T ss_pred cc------------------------cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH
Confidence 00 001122346899999999998888999999999999999999999999887666
Q ss_pred HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCcc
Q 001902 901 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 955 (998)
Q Consensus 901 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 955 (998)
..+..+.............+..+.++|.+|+. +|.+||+ ++++++|||+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~----~~~il~~~~~~ 265 (265)
T cd06652 216 AAIFKIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPS----ADELLRHTFVH 265 (265)
T ss_pred HHHHHHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCC----HHHHhcCcccC
Confidence 55555443322222223456788999999995 9999999 99999999984
No 181
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.3e-36 Score=336.07 Aligned_cols=256 Identities=27% Similarity=0.454 Sum_probs=210.9
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
.|++++.||.|++|.||+|.+..+++.||+|.+..... .......+.+|++++++++||||+++++++...+..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 79 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccc-ccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEee
Confidence 48899999999999999999999999999998875432 22234567889999999999999999999999999999999
Q ss_pred cCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCC
Q 001902 746 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 825 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 825 (998)
|+. ++|..++.......+++..++.++.||+.||+|||+.|++|+||+|+||+++.++.++|+|||++.......
T Consensus 80 ~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~---- 154 (284)
T cd07860 80 FLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---- 154 (284)
T ss_pred ccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc----
Confidence 995 689988876655679999999999999999999999999999999999999999999999999885432110
Q ss_pred CcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCC-CCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001902 826 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 904 (998)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~ 904 (998)
.......+++.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+......
T Consensus 155 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~ 211 (284)
T cd07860 155 -----------------------RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 211 (284)
T ss_pred -----------------------cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 0112335788999999987654 5789999999999999999999998876655444
Q ss_pred HHHhCCC------------------CCCC---------CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 905 NILHKDL------------------KFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 905 ~i~~~~~------------------~~~~---------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
++..... .++. ...++.++.++|.+||+.||.+||| +.++++||||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~~l~~~~f 284 (284)
T cd07860 212 RIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRIS----AKAALAHPFF 284 (284)
T ss_pred HHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCC----HHHHhcCCCC
Confidence 4332100 0010 1235778899999999999999999 9999999998
No 182
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.2e-36 Score=338.13 Aligned_cols=255 Identities=27% Similarity=0.466 Sum_probs=215.5
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
.|.....||.|+||.||++.+..++..||+|.+... .......+.+|+.+++.++|+||+++++.+...+..|+|||
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e 99 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR---KQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVME 99 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecc---hHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEe
Confidence 456667899999999999999889999999988643 23345667889999999999999999999999999999999
Q ss_pred cCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCC
Q 001902 746 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 825 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 825 (998)
|+++++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 100 ~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~----- 171 (292)
T cd06658 100 FLEGGALTDIVTH---TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE----- 171 (292)
T ss_pred CCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccc-----
Confidence 9999999998854 34899999999999999999999999999999999999999999999999988432210
Q ss_pred CcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001902 826 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 905 (998)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~ 905 (998)
........|++.|+|||++.+..++.++||||||+++|+|++|+.||...+....+..
T Consensus 172 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~ 229 (292)
T cd06658 172 ----------------------VPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRR 229 (292)
T ss_pred ----------------------cccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 0111234689999999999888899999999999999999999999988776665555
Q ss_pred HHhC-CCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 906 ILHK-DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 906 i~~~-~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
+... ....+.....+..+.+|+.+||..||.+||| +.++++||||...
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~il~~~~~~~~ 278 (292)
T cd06658 230 IRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRAT----AQELLQHPFLKLA 278 (292)
T ss_pred HHhcCCCccccccccCHHHHHHHHHHccCChhHCcC----HHHHhhChhhhcc
Confidence 4432 1222333456788999999999999999999 9999999999864
No 183
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.9e-36 Score=335.01 Aligned_cols=259 Identities=25% Similarity=0.426 Sum_probs=216.8
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEE
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 741 (998)
+..++|++++.||+|+||.||++.+..+|+.||+|++.... .......+.+|+++++.++||||+++++++...+.+|
T Consensus 2 l~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 79 (284)
T cd06620 2 LRNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNIC 79 (284)
T ss_pred ccHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEE
Confidence 34578999999999999999999999899999999887542 2344577889999999999999999999999999999
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
+||||+++++|.+++... +.+++..++.++.+++.||.|||+ .+++|+||||+||+++.++.++|+|||++.....
T Consensus 80 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~- 156 (284)
T cd06620 80 MCMEFMDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELIN- 156 (284)
T ss_pred EEEecCCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhh-
Confidence 999999999999998764 458999999999999999999997 5999999999999999999999999998743210
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChH
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 900 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~ 900 (998)
.......|+..|+|||++.+..++.++|||||||++|+|++|..||......
T Consensus 157 ----------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~ 208 (284)
T cd06620 157 ----------------------------SIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNID 208 (284)
T ss_pred ----------------------------hccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchh
Confidence 0112346899999999998888999999999999999999999999865432
Q ss_pred -----------HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 901 -----------KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 901 -----------~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
.....+.....+.......+.++.+|+.+||..||.+||+ +.++++|+||...
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt----~~e~~~~~~~~~~ 272 (284)
T cd06620 209 DDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPT----PQQLCAMPPFIQA 272 (284)
T ss_pred hhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcC----HHHHhcCcccccc
Confidence 2233333332222122236678999999999999999999 9999999999763
No 184
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=2.3e-36 Score=333.74 Aligned_cols=258 Identities=24% Similarity=0.389 Sum_probs=214.0
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCC-----eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEee
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSG-----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 736 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~-----~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~ 736 (998)
+..++|++++.||+|+||.||+|.+...+ ..+++|.+.... .......+.+|+.+++.++||||+++++++..
T Consensus 2 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~ 79 (283)
T cd05048 2 IPLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTK 79 (283)
T ss_pred CChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC--CHHHHHHHHHHHHHHHhcCCcccceEEEEEcC
Confidence 34568999999999999999999986554 789999887432 33445678899999999999999999999999
Q ss_pred CCeEEEEEecCCCCchhHHHhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec
Q 001902 737 KTHVCLITDYCPGGELFLLLDRQPT--------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG 802 (998)
Q Consensus 737 ~~~~~lV~E~~~ggsL~~~l~~~~~--------------~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~ 802 (998)
....|++|||+++++|.+++..... ..++...+..++.||+.||.|||++|++|+||||+||+++.
T Consensus 80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~ 159 (283)
T cd05048 80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGE 159 (283)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcC
Confidence 9999999999999999999975421 45788999999999999999999999999999999999999
Q ss_pred CCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHH
Q 001902 803 NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGI 882 (998)
Q Consensus 803 ~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~ 882 (998)
++.++|+|||++........ ........+++.|+|||.+.+..++.++|||||||
T Consensus 160 ~~~~~L~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~ 214 (283)
T cd05048 160 GLTVKISDFGLSRDIYSADY-------------------------YRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGV 214 (283)
T ss_pred CCcEEECCCcceeecccccc-------------------------ccccCCCcccccccCHHHhccCcCchhhhHHHHHH
Confidence 99999999999854321100 01112335688999999998888999999999999
Q ss_pred HHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 883 LLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 883 il~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
++|+|++ |..||.+.+..+....+..... .+....++.++.+|+.+||+.||.+||+ +.+++++
T Consensus 215 il~el~~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~l~~~c~~~~p~~Rp~----~~~i~~~ 279 (283)
T cd05048 215 VLWEIFSYGLQPYYGFSNQEVIEMIRSRQL-LPCPEDCPARVYALMIECWNEIPARRPR----FKDIHTR 279 (283)
T ss_pred HHHHHHcCCCCCCCCCCHHHHHHHHHcCCc-CCCcccCCHHHHHHHHHHccCChhhCcC----HHHHHHH
Confidence 9999997 9999999888777666655433 2334567899999999999999999999 6666654
No 185
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=2e-36 Score=331.21 Aligned_cols=261 Identities=23% Similarity=0.382 Sum_probs=213.4
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccC---hhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEE
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN---RNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 742 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 742 (998)
+|+..+.||+|++|.||++.+..+++.+|+|++....... ......+..|+.+++.++|+||+++++++...+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 4788899999999999999999999999999987543211 2245678899999999999999999999999999999
Q ss_pred EEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCC-cEEEEeccCccccCCCC
Q 001902 743 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 743 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g-~vkL~DFG~a~~~~~~~ 821 (998)
||||+++++|.+++.+. ..+++..+..++.||+.||.|||++|++|+||+|+||+++.++ .++|+|||.+.......
T Consensus 81 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~ 158 (268)
T cd06630 81 FVEWMAGGSVSHLLSKY--GAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKG 158 (268)
T ss_pred EEeccCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccccc
Confidence 99999999999999764 4589999999999999999999999999999999999998776 59999999985543110
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHH
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 901 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~ 901 (998)
...........|+..|+|||.+.+..++.++|+|||||++|+|++|..||.......
T Consensus 159 -----------------------~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~ 215 (268)
T cd06630 159 -----------------------TGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSN 215 (268)
T ss_pred -----------------------ccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcc
Confidence 000111234568999999999988889999999999999999999999997654332
Q ss_pred HHHHH---HhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCcc
Q 001902 902 TFANI---LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 955 (998)
Q Consensus 902 ~~~~i---~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 955 (998)
....+ .............+..+.+++.+||..+|.+||+ +.++++||||+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~----~~~ll~~~~~~ 268 (268)
T cd06630 216 HLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPP----SRELLKHPVFR 268 (268)
T ss_pred hHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcC----HHHHhcCcccC
Confidence 22222 2222222222346788999999999999999999 99999999985
No 186
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.1e-36 Score=350.29 Aligned_cols=256 Identities=22% Similarity=0.318 Sum_probs=207.6
Q ss_pred cccCCcccccccCCCCceeEEEEEEccC-----CeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEe
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQ 735 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~-----~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~ 735 (998)
+..++|++.+.||+|+||.||+|.+..+ +..||+|+++... .......+.+|+.+++.+ +|+||+++++++.
T Consensus 35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~ 112 (374)
T cd05106 35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA--HTDEREALMSELKILSHLGQHKNIVNLLGACT 112 (374)
T ss_pred ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC--CHHHHHHHHHHHHHHHhhccCCceeeEeeEec
Confidence 3456899999999999999999987544 3579999997543 223456678899999999 8999999999999
Q ss_pred eCCeEEEEEecCCCCchhHHHhhCC-------------------------------------------------------
Q 001902 736 TKTHVCLITDYCPGGELFLLLDRQP------------------------------------------------------- 760 (998)
Q Consensus 736 ~~~~~~lV~E~~~ggsL~~~l~~~~------------------------------------------------------- 760 (998)
..+.+|+|||||++|+|.+++....
T Consensus 113 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (374)
T cd05106 113 HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSS 192 (374)
T ss_pred CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccc
Confidence 9999999999999999999886421
Q ss_pred -------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCc
Q 001902 761 -------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 827 (998)
Q Consensus 761 -------------~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~ 827 (998)
...++...++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 193 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~----- 267 (374)
T cd05106 193 QSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN----- 267 (374)
T ss_pred ccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc-----
Confidence 12478888999999999999999999999999999999999999999999999854321100
Q ss_pred chhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHH
Q 001902 828 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANI 906 (998)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~~~~~~i 906 (998)
........+++.|||||++.+..++.++|||||||++|+|++ |..||........+..+
T Consensus 268 --------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~ 327 (374)
T cd05106 268 --------------------YVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKM 327 (374)
T ss_pred --------------------eeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHH
Confidence 011122345678999999998899999999999999999997 99999887665555555
Q ss_pred HhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhc
Q 001902 907 LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 944 (998)
Q Consensus 907 ~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 944 (998)
.......+.....+.++.+++.+||+.||.+||++.++
T Consensus 328 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l 365 (374)
T cd05106 328 VKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQI 365 (374)
T ss_pred HHcccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 55544444444568899999999999999999994443
No 187
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-37 Score=362.60 Aligned_cols=262 Identities=29% Similarity=0.403 Sum_probs=215.4
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCccceeE-EEee---
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYA-SFQT--- 736 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~-~~~~--- 736 (998)
+...++++.+.|.+|||+.||+|.+...|..||+|.+-. .+....+.+.+|+++|++|. |+|||.+++ ....
T Consensus 34 Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~---~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~ 110 (738)
T KOG1989|consen 34 VGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYV---NDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSS 110 (738)
T ss_pred ECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeec---CCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccC
Confidence 445678899999999999999999988889999998763 37777888999999999995 999999999 3321
Q ss_pred C---CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCcEEEecCCcEEEEec
Q 001902 737 K---THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSLTDF 811 (998)
Q Consensus 737 ~---~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~--IiHrDLkP~NILi~~~g~vkL~DF 811 (998)
+ -.+.|+||||.||.|-++|..+....|++.++.+|+.++++||++||... |||||||-+||||+.+|+.|||||
T Consensus 111 ~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDF 190 (738)
T KOG1989|consen 111 NNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDF 190 (738)
T ss_pred CCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcc
Confidence 1 25789999999999999998654555999999999999999999999997 999999999999999999999999
Q ss_pred cCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhh---cCCCCCChhHHHHHHHHHHHHH
Q 001902 812 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII---AGAGHTSAVDWWALGILLYEML 888 (998)
Q Consensus 812 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l---~~~~~~~~sDIwSlG~il~eLl 888 (998)
|.++.....+. ...+. .-........-|+.|+|||++ .+.+.+.|+|||+|||+||-|+
T Consensus 191 GSatt~~~~~~----~~~e~--------------~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLC 252 (738)
T KOG1989|consen 191 GSATTKILSPT----SAQEV--------------NYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLC 252 (738)
T ss_pred cccccccCCCc----cHHHH--------------HHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHH
Confidence 99854321110 00000 000111223579999999998 5678899999999999999999
Q ss_pred cCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHH
Q 001902 889 YGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 948 (998)
Q Consensus 889 tG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~el 948 (998)
+...||.+... -.|+.+.+.+|.....+..+.+||..||+.||.+||++-++..++
T Consensus 253 y~t~PFe~sg~----laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~ 308 (738)
T KOG1989|consen 253 YFTTPFEESGK----LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEI 308 (738)
T ss_pred HhCCCcCcCcc----eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHH
Confidence 99999987643 357788999999999999999999999999999999965554443
No 188
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=3.6e-36 Score=327.00 Aligned_cols=252 Identities=26% Similarity=0.476 Sum_probs=216.1
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
+|++.+.||.|+||.||++.+..+++.||+|.+.... .....+.+.+|+.+++.++|+||+++++.+...+.+|+|||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK--SSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVME 78 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc--chHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence 5889999999999999999999999999999986432 23345677889999999999999999999999999999999
Q ss_pred cCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCC
Q 001902 746 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 825 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 825 (998)
|+++++|.+++.......+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||.+......
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~----- 153 (255)
T cd08219 79 YCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP----- 153 (255)
T ss_pred eCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccc-----
Confidence 999999999987655566899999999999999999999999999999999999999999999999988543211
Q ss_pred CcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001902 826 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 905 (998)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~ 905 (998)
........|++.|+|||++.+..++.++|+||||+++|+|++|..||...+.......
T Consensus 154 ----------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~ 211 (255)
T cd08219 154 ----------------------GAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILK 211 (255)
T ss_pred ----------------------ccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHH
Confidence 0112235689999999999998899999999999999999999999998887777766
Q ss_pred HHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 906 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 906 i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
+....... .....+..+.+||.+||..||.+||+ +.+++.-
T Consensus 212 ~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rp~----~~~il~~ 252 (255)
T cd08219 212 VCQGSYKP-LPSHYSYELRSLIKQMFKRNPRSRPS----ATTILSR 252 (255)
T ss_pred HhcCCCCC-CCcccCHHHHHHHHHHHhCCcccCCC----HHHHhhc
Confidence 66554332 23346788999999999999999999 7777653
No 189
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=3.2e-36 Score=337.42 Aligned_cols=263 Identities=29% Similarity=0.388 Sum_probs=213.8
Q ss_pred ccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC--CeE
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THV 740 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~~~ 740 (998)
..++|++.+.||.|+||.||+|.+..+|+.||+|.++..... ........+|+.++++++|+||+++++++... +.+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNER-DGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSI 83 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCC-CCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeE
Confidence 457899999999999999999999999999999998754321 12223456799999999999999999998754 578
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
++||||+. ++|.+++.... ..+++..++.++.||+.||.|||+.|++||||||+||+++.++.+||+|||++......
T Consensus 84 ~lv~e~~~-~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~ 161 (309)
T cd07845 84 FLVMEYCE-QDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP 161 (309)
T ss_pred EEEEecCC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCc
Confidence 99999995 58888887542 45899999999999999999999999999999999999999999999999998554311
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCCCCh
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 899 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~ 899 (998)
. .......+++.|+|||.+.+ ..++.++|||||||++|+|++|.+||.+.+.
T Consensus 162 ~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~ 214 (309)
T cd07845 162 A---------------------------KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSE 214 (309)
T ss_pred c---------------------------CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 0 01112245788999999866 5578899999999999999999999998888
Q ss_pred HHHHHHHHhCC-------------------CCCCC---------CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 900 QKTFANILHKD-------------------LKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 900 ~~~~~~i~~~~-------------------~~~~~---------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
...+..+.... ...+. ....+..+.+||.+||+.||.+||| +.+++.|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t----~~~il~h 290 (309)
T cd07845 215 IEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRAT----AEEALES 290 (309)
T ss_pred HHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcC----HHHHhcC
Confidence 77776665421 00110 0124778899999999999999999 9999999
Q ss_pred CCccCCCh
Q 001902 952 PFFKGVNW 959 (998)
Q Consensus 952 p~f~~~~~ 959 (998)
|||+....
T Consensus 291 ~~f~~~~~ 298 (309)
T cd07845 291 SYFKEKPL 298 (309)
T ss_pred hhhccCCC
Confidence 99986433
No 190
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.5e-36 Score=334.13 Aligned_cols=258 Identities=29% Similarity=0.449 Sum_probs=213.7
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++++.||+|+||.||++.+..+++.||+|.++.. ........+.+|+.++++++|+||+++++++...+.+|+||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLE--LDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCM 78 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecc--cCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEE
Confidence 4689999999999999999999989999999988753 23344567889999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCcEEEecCCcEEEEeccCccccCCCCC
Q 001902 745 DYCPGGELFLLLDRQ-PTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 822 (998)
Q Consensus 745 E~~~ggsL~~~l~~~-~~~~l~~~~~~~i~~qil~aL~~LH~-~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 822 (998)
||+++++|..++... ....+++..+..++.||+.||.|||+ .||+|+||||+||+++.++.++|+|||++.....
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~--- 155 (286)
T cd06622 79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVA--- 155 (286)
T ss_pred eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccC---
Confidence 999999999988753 12368999999999999999999997 5999999999999999999999999998843210
Q ss_pred CCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC------CCCChhHHHHHHHHHHHHHcCCCCCCC
Q 001902 823 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA------GHTSAVDWWALGILLYEMLYGYTPFRG 896 (998)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~------~~~~~sDIwSlG~il~eLltG~~Pf~~ 896 (998)
.......|++.|+|||.+.+. .++.++|||||||++|+|++|..||..
T Consensus 156 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 209 (286)
T cd06622 156 --------------------------SLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPP 209 (286)
T ss_pred --------------------------CccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCC
Confidence 011234588899999998554 347799999999999999999999977
Q ss_pred CChHHHHHH---HHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCC
Q 001902 897 KTRQKTFAN---ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 958 (998)
Q Consensus 897 ~~~~~~~~~---i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 958 (998)
......... +.... ........+.++.+||.+||..+|.+||+ +.++++||||....
T Consensus 210 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~l~~~~~~~~~~ 269 (286)
T cd06622 210 ETYANIFAQLSAIVDGD-PPTLPSGYSDDAQDFVAKCLNKIPNRRPT----YAQLLEHPWLVKYK 269 (286)
T ss_pred cchhhHHHHHHHHhhcC-CCCCCcccCHHHHHHHHHHcccCcccCCC----HHHHhcChhhhhcc
Confidence 655443332 22222 12222347889999999999999999999 99999999998753
No 191
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.8e-36 Score=348.83 Aligned_cols=258 Identities=22% Similarity=0.323 Sum_probs=208.0
Q ss_pred cccCCcccccccCCCCceeEEEEEE-----ccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEe
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVEL-----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQ 735 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~-----~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~ 735 (998)
+..++|++.+.||+|+||.||+|.+ ..++..||+|+++... .......+.+|+.+++.+ +||||+++++++.
T Consensus 32 ~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~ 109 (375)
T cd05104 32 FPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHINIVNLLGACT 109 (375)
T ss_pred cchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc--CcHHHHHHHHHHHHHHHhcCCcceeeeeeeec
Confidence 3456899999999999999999974 3457789999987542 223446788899999999 8999999999999
Q ss_pred eCCeEEEEEecCCCCchhHHHhhCC-------------------------------------------------------
Q 001902 736 TKTHVCLITDYCPGGELFLLLDRQP------------------------------------------------------- 760 (998)
Q Consensus 736 ~~~~~~lV~E~~~ggsL~~~l~~~~------------------------------------------------------- 760 (998)
..+..++|||||++|+|.+++....
T Consensus 110 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 189 (375)
T cd05104 110 VGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSV 189 (375)
T ss_pred cCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccc
Confidence 9999999999999999999986431
Q ss_pred ------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCC
Q 001902 761 ------------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 822 (998)
Q Consensus 761 ------------------~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 822 (998)
...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 269 (375)
T cd05104 190 RSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN 269 (375)
T ss_pred ccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCccc
Confidence 12477888999999999999999999999999999999999999999999999854321110
Q ss_pred CCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCChHH
Q 001902 823 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQK 901 (998)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~~ 901 (998)
........++..|+|||++.+..++.++|||||||++|+|++ |..||.......
T Consensus 270 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~ 324 (375)
T cd05104 270 -------------------------YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS 324 (375)
T ss_pred -------------------------ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH
Confidence 001122345678999999999999999999999999999997 999998776555
Q ss_pred HHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 902 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 902 ~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
.+...+............+.++.+|+.+||+.||++||+ +.++++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs----~~eil~ 369 (375)
T cd05104 325 KFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPT----FKQIVQ 369 (375)
T ss_pred HHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHCcC----HHHHHH
Confidence 555555544333333445789999999999999999999 555543
No 192
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=3.4e-36 Score=343.93 Aligned_cols=255 Identities=26% Similarity=0.489 Sum_probs=209.3
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC------
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 737 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------ 737 (998)
.++|++++.||+|+||.||+|.+..+++.||+|.+.+.. ........+.+|+.++++++|+||++++++|...
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPF-QNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccc-cChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 478999999999999999999999999999999986532 2333445677899999999999999999988643
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
..+|+||||+ +++|.+.+... ++...+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++...
T Consensus 94 ~~~~lv~e~~-~~~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~ 168 (353)
T cd07850 94 QDVYLVMELM-DANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 168 (353)
T ss_pred CcEEEEEecc-CCCHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeC
Confidence 3579999999 56888887653 889999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 897 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~ 897 (998)
... .......|++.|+|||.+.+..++.++|||||||++|+|++|+.||...
T Consensus 169 ~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~ 220 (353)
T cd07850 169 GTS----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGT 220 (353)
T ss_pred CCC----------------------------CCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCC
Confidence 211 0112345889999999999999999999999999999999999999887
Q ss_pred ChHHHHHHHHhCCC------------------------------------CCCC-----CCCCcHHHHHHHHHccccCcc
Q 001902 898 TRQKTFANILHKDL------------------------------------KFPS-----STPTSLHAKQLMYRLLHRDPK 936 (998)
Q Consensus 898 ~~~~~~~~i~~~~~------------------------------------~~~~-----~~~~s~~l~~Ll~~~L~~dP~ 936 (998)
+....+..+..... .++. ....+..+.+||.+||+.||+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 300 (353)
T cd07850 221 DHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPE 300 (353)
T ss_pred CHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChh
Confidence 76554444432100 0000 112355688999999999999
Q ss_pred CcCCChhcHHHHHcCCCccC
Q 001902 937 SRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 937 ~Rpt~~~~a~elL~Hp~f~~ 956 (998)
+||| +.++|+||||+.
T Consensus 301 ~R~t----~~eiL~~~~~~~ 316 (353)
T cd07850 301 KRIS----VDDALQHPYINV 316 (353)
T ss_pred hCcC----HHHHhcChhHhh
Confidence 9999 999999999995
No 193
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=3e-36 Score=330.59 Aligned_cols=256 Identities=29% Similarity=0.438 Sum_probs=212.6
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCC----
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT---- 738 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~---- 738 (998)
.++|++.+.||.|++|.||+|.+..+++.+++|++.... .....+.+|+.+++++ +|+||+++++++....
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE----DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc----hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 468999999999999999999999899999999987542 2345688899999999 7999999999997544
Q ss_pred --eEEEEEecCCCCchhHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCc
Q 001902 739 --HVCLITDYCPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 814 (998)
Q Consensus 739 --~~~lV~E~~~ggsL~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a 814 (998)
.+|+||||+++++|.+++.... ...+++..++.++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~ 160 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVS 160 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccc
Confidence 5899999999999999987532 456899999999999999999999999999999999999999999999999988
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-----CCCCChhHHHHHHHHHHHHHc
Q 001902 815 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLY 889 (998)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----~~~~~~sDIwSlG~il~eLlt 889 (998)
...... ........|++.|+|||++.. ..++.++|||||||++|+|++
T Consensus 161 ~~~~~~---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~ 213 (275)
T cd06608 161 AQLDST---------------------------LGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELAD 213 (275)
T ss_pred eecccc---------------------------hhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHh
Confidence 543210 011223468999999999854 346778999999999999999
Q ss_pred CCCCCCCCChHHHHHHHHhCCCC-CCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 890 GYTPFRGKTRQKTFANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 890 G~~Pf~~~~~~~~~~~i~~~~~~-~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
|..||...........+...... .......+..+.+||.+||..||++||| +.++++|||+
T Consensus 214 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt----~~~ll~~~~~ 275 (275)
T cd06608 214 GKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPF----MEELLEHPFI 275 (275)
T ss_pred CCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcC----HHHHhcCCCC
Confidence 99999877666666665554322 2222235778999999999999999999 9999999996
No 194
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=4.1e-36 Score=335.76 Aligned_cols=254 Identities=24% Similarity=0.345 Sum_probs=203.7
Q ss_pred cCCcccccccCCCCceeEEEEEEcc----------------CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCc
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCG----------------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFV 727 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~----------------~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nI 727 (998)
.++|++.+.||+|+||.||+|.+.. ++..||+|++.... .......+.+|+.++.+++||||
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~ni 81 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--NKNARNDFLKEVKILSRLKDPNI 81 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCe
Confidence 4689999999999999999998632 34579999987542 33445678899999999999999
Q ss_pred cceeEEEeeCCeEEEEEecCCCCchhHHHhhCC-----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 001902 728 PALYASFQTKTHVCLITDYCPGGELFLLLDRQP-----------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIY 790 (998)
Q Consensus 728 v~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~-----------------~~~l~~~~~~~i~~qil~aL~~LH~~~IiH 790 (998)
+++++++...+..|+||||+++++|.+++.... ...++...+..++.||+.||.|||++||+|
T Consensus 82 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH 161 (304)
T cd05096 82 IRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVH 161 (304)
T ss_pred eEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 999999999999999999999999999986531 123677889999999999999999999999
Q ss_pred ccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCC
Q 001902 791 RDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG 870 (998)
Q Consensus 791 rDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 870 (998)
|||||+|||++.++.+||+|||++....... .........++..|+|||++.+..
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~ 216 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGD-------------------------YYRIQGRAVLPIRWMAWECILMGK 216 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCc-------------------------eeEecCcCCCCccccCHHHHhcCC
Confidence 9999999999999999999999985432110 001122345678999999999888
Q ss_pred CCChhHHHHHHHHHHHHHc--CCCCCCCCChHHHHHHHHh---C---CCCCCCCCCCcHHHHHHHHHccccCccCcCCCh
Q 001902 871 HTSAVDWWALGILLYEMLY--GYTPFRGKTRQKTFANILH---K---DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH 942 (998)
Q Consensus 871 ~~~~sDIwSlG~il~eLlt--G~~Pf~~~~~~~~~~~i~~---~---~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~ 942 (998)
++.++|||||||++|+|++ |..||.+.+....+..+.. . .........++..+.+|+.+||..||.+|||
T Consensus 217 ~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs-- 294 (304)
T cd05096 217 FTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPS-- 294 (304)
T ss_pred CCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcC--
Confidence 9999999999999999986 6788887766555544322 1 1111223456788999999999999999999
Q ss_pred hcHHHH
Q 001902 943 EGANEI 948 (998)
Q Consensus 943 ~~a~el 948 (998)
+.+|
T Consensus 295 --~~~i 298 (304)
T cd05096 295 --FSDI 298 (304)
T ss_pred --HHHH
Confidence 5555
No 195
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=6.6e-36 Score=326.72 Aligned_cols=251 Identities=22% Similarity=0.310 Sum_probs=211.1
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEE
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 741 (998)
+...+|.+.+.||+|+||.||+|.+..+++.+|+|++... ......+.+|+.+++.++|+||+++++++...+.++
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 78 (263)
T cd05052 3 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 78 (263)
T ss_pred CchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC----chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcE
Confidence 4456799999999999999999999999999999998743 223467888999999999999999999999999999
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 821 (998)
+||||+++++|.+++.......++...++.++.|++.||+|||++|++||||||+||+++.++.+||+|||++.......
T Consensus 79 lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~ 158 (263)
T cd05052 79 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 158 (263)
T ss_pred EEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccce
Confidence 99999999999999976555568999999999999999999999999999999999999999999999999985432110
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCChH
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 900 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~ 900 (998)
. .......++..|+|||.+.+..++.++|||||||++|+|++ |..||.+.+..
T Consensus 159 ~--------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~ 212 (263)
T cd05052 159 Y--------------------------TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 212 (263)
T ss_pred e--------------------------eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 0 00112234668999999999999999999999999999998 99999988776
Q ss_pred HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChh
Q 001902 901 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 943 (998)
Q Consensus 901 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 943 (998)
.....+... ...+.....+..+.+++.+||..||++||++.+
T Consensus 213 ~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ 254 (263)
T cd05052 213 QVYELLEKG-YRMERPEGCPPKVYELMRACWQWNPSDRPSFAE 254 (263)
T ss_pred HHHHHHHCC-CCCCCCCCCCHHHHHHHHHHccCCcccCCCHHH
Confidence 666555443 333334557889999999999999999999444
No 196
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=4.6e-36 Score=327.28 Aligned_cols=250 Identities=22% Similarity=0.346 Sum_probs=210.8
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
.+..++|+++++||+|+||.||+|.+. ++..||+|.+.... .....+.+|+.+++.++|+||+++++++...+..
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 76 (261)
T cd05072 2 EIPRESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT----MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPI 76 (261)
T ss_pred cCchHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc----hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence 355678999999999999999999974 56789999876532 2346788899999999999999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
+++|||+++++|.+++.......++...+..++.||+.||+|||+++++|+||||+||+++.++.++|+|||++......
T Consensus 77 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05072 77 YIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDN 156 (261)
T ss_pred EEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCC
Confidence 99999999999999998765667899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCCh
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 899 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~ 899 (998)
.. .......++..|+|||++.+..++.++|||||||++|+|++ |..||.+...
T Consensus 157 ~~--------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~ 210 (261)
T cd05072 157 EY--------------------------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN 210 (261)
T ss_pred ce--------------------------eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH
Confidence 00 01112345678999999988889999999999999999998 9999988877
Q ss_pred HHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCCh
Q 001902 900 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH 942 (998)
Q Consensus 900 ~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~ 942 (998)
......+... ...+.....+.++.+|+.+||..+|++||++.
T Consensus 211 ~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ 252 (261)
T cd05072 211 SDVMSALQRG-YRMPRMENCPDELYDIMKTCWKEKAEERPTFD 252 (261)
T ss_pred HHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHccCCcccCcCHH
Confidence 7666665543 34444556788999999999999999999933
No 197
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2.2e-36 Score=334.36 Aligned_cols=256 Identities=28% Similarity=0.407 Sum_probs=210.8
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++++.||+|+||.||+|.+..+++.||+|.+.+.... ......+.+|+++++.++||||+++++++......|+||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDD-KMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCc-chhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEE
Confidence 3689999999999999999999889999999998764322 234456778999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||+++++|..+.... ..+++..++.++.||+.||+|||+.||+|+||+|+||+++.++.++|+|||++.......
T Consensus 80 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~--- 154 (286)
T cd07846 80 EFVDHTVLDDLEKYP--NGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG--- 154 (286)
T ss_pred ecCCccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc---
Confidence 999999998877553 348999999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 903 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~ 903 (998)
.......++..|+|||++.+ ..++.++|||||||++|+|++|.+||......+..
T Consensus 155 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~ 210 (286)
T cd07846 155 ------------------------EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQL 210 (286)
T ss_pred ------------------------cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHH
Confidence 11123468899999999876 44678999999999999999999999876655444
Q ss_pred HHHHhC-------------------CCCCCC----------CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 904 ANILHK-------------------DLKFPS----------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 904 ~~i~~~-------------------~~~~~~----------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
..+... ....+. ...++..+.+|+.+||..+|.+||+ +.++++||||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~----~~~il~~~~~ 286 (286)
T cd07846 211 YHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPS----SSQLLHHEFF 286 (286)
T ss_pred HHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchh----HHHHhcCCCC
Confidence 443321 011111 1245778999999999999999999 9999999998
No 198
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=5.9e-36 Score=335.03 Aligned_cols=256 Identities=27% Similarity=0.389 Sum_probs=216.0
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
..|.+.+.||+|+||.||++.+..+++.||+|++.............+.+|+.+++.++||||+++++++...+..|+||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 46999999999999999999998899999999987554444555667889999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||++ ++|.+++... ...+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++....
T Consensus 95 e~~~-g~l~~~~~~~-~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~------ 166 (307)
T cd06607 95 EYCL-GSASDILEVH-KKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVS------ 166 (307)
T ss_pred HhhC-CCHHHHHHHc-ccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecC------
Confidence 9995 6777776543 2458999999999999999999999999999999999999999999999999884421
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhc---CCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 901 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~ 901 (998)
......|++.|+|||++. ...++.++||||||+++|+|++|.+||.+.+...
T Consensus 167 -------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~ 221 (307)
T cd06607 167 -------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS 221 (307)
T ss_pred -------------------------CCCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHH
Confidence 112345788999999884 3567889999999999999999999998877766
Q ss_pred HHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 902 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 902 ~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
....+.............+..+.+||.+||..+|.+||+ +.+++.||||...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~ 273 (307)
T cd06607 222 ALYHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPS----SEELLKHRFVLRE 273 (307)
T ss_pred HHHHHhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcC----HHHHhcChhhccc
Confidence 655555443322222345778999999999999999999 9999999999874
No 199
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=6.5e-36 Score=328.21 Aligned_cols=258 Identities=26% Similarity=0.426 Sum_probs=212.2
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccC-------hhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-------RNKVHRACAEREILDMLDHPFVPALYASFQTKT 738 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~-------~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 738 (998)
+|.+.+.||.|+||.||+|.+..+|+.+|+|.+....... ....+.+..|+.+++.++|+||+++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4788899999999999999998899999999886422111 112356778999999999999999999999999
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccC
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 818 (998)
..++||||+++++|.+++.+. ..++...++.++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++....
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~ 159 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSD 159 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeecccccccc
Confidence 999999999999999999775 468999999999999999999999999999999999999999999999999985432
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCC--CCChhHHHHHHHHHHHHHcCCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG--HTSAVDWWALGILLYEMLYGYTPFRG 896 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~--~~~~sDIwSlG~il~eLltG~~Pf~~ 896 (998)
.... ........|+..|+|||++.... ++.++|+||||+++|+|++|..||..
T Consensus 160 ~~~~-------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~ 214 (272)
T cd06629 160 DIYD-------------------------NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSD 214 (272)
T ss_pred cccc-------------------------ccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcC
Confidence 1000 00122345889999999987654 78899999999999999999999987
Q ss_pred CChHHHHHHHHhCC--CCCCCC--CCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 897 KTRQKTFANILHKD--LKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 897 ~~~~~~~~~i~~~~--~~~~~~--~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
.........+.... ..++.. ..++..+.+||.+||..+|.+||+ +.++|+||||
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il~~~~~ 272 (272)
T cd06629 215 EEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPT----ARELLQHPFI 272 (272)
T ss_pred cchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCC----HHHHhhCCCC
Confidence 66655544443322 122221 245788999999999999999999 9999999997
No 200
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=6.8e-36 Score=329.33 Aligned_cols=258 Identities=28% Similarity=0.393 Sum_probs=218.2
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
..|+.++.||.|+||.||+|.+..++..+|+|++.... .......+.+|+.+++.++|+||+++++++...+..|+||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIM 81 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc--cHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 35888999999999999999998899999999987542 2344567888999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||+++++|.+++.. ..+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~--- 155 (277)
T cd06640 82 EYLGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--- 155 (277)
T ss_pred ecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCc---
Confidence 99999999999865 348899999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 904 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~ 904 (998)
.......++..|+|||++.+..++.++|+|||||++|+|++|..||...+......
T Consensus 156 ------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~ 211 (277)
T cd06640 156 ------------------------IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLF 211 (277)
T ss_pred ------------------------cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhh
Confidence 01123468889999999998889999999999999999999999998877665555
Q ss_pred HHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCCh
Q 001902 905 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 959 (998)
Q Consensus 905 ~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 959 (998)
.+..... .......+..+.+|+.+||..+|.+||+ +.++++||||.....
T Consensus 212 ~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~~~ 261 (277)
T cd06640 212 LIPKNNP-PTLTGEFSKPFKEFIDACLNKDPSFRPT----AKELLKHKFIVKNAK 261 (277)
T ss_pred hhhcCCC-CCCchhhhHHHHHHHHHHcccCcccCcC----HHHHHhChHhhhcch
Confidence 4433321 1122345678899999999999999999 999999999987544
No 201
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-38 Score=314.04 Aligned_cols=266 Identities=25% Similarity=0.346 Sum_probs=215.9
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEe-----
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ----- 735 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~----- 735 (998)
.++..+|++.+.||+|||+.||++.+..+++.||+|.+... ..+..+...+|++..++++||||++++++..
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~---~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D 93 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCH---SQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKD 93 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeecc---chHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhcc
Confidence 46788999999999999999999999999999999998754 3566778889999999999999999988663
Q ss_pred eCCeEEEEEecCCCCchhHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCcEEEecCCcEEEEec
Q 001902 736 TKTHVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSLTDF 811 (998)
Q Consensus 736 ~~~~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~~--IiHrDLkP~NILi~~~g~vkL~DF 811 (998)
..+..||+++|...|+|.+.+... ++..+++.++..|+.+|++||++||... .+||||||.|||++..+.++|.||
T Consensus 94 ~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~ 173 (302)
T KOG2345|consen 94 GKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDL 173 (302)
T ss_pred CceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEec
Confidence 345699999999999999998753 4456999999999999999999999998 999999999999999999999999
Q ss_pred cCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC---CCCCChhHHHHHHHHHHHHH
Q 001902 812 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEML 888 (998)
Q Consensus 812 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~---~~~~~~sDIwSlG~il~eLl 888 (998)
|.+......-. +... ...-........|..|.|||.+.- ...+.++|||||||+||.|+
T Consensus 174 GS~~~a~i~i~--------------~~~~----a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~m 235 (302)
T KOG2345|consen 174 GSATQAPIQIE--------------GSRQ----ALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMM 235 (302)
T ss_pred cCccccceEee--------------chHH----HHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHH
Confidence 99865431100 0000 000111223457899999999854 45677999999999999999
Q ss_pred cCCCCCCCCCh--HHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 889 YGYTPFRGKTR--QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 889 tG~~Pf~~~~~--~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
+|..||..... ....-.+....+.+|...+.|..+.+||+.||+.||.+||+ +.+|+.+
T Consensus 236 f~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~----i~~ll~~ 296 (302)
T KOG2345|consen 236 FGESPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPT----IPELLSK 296 (302)
T ss_pred HcCCcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCC----HHHHHHH
Confidence 99999964221 11222344567889999999999999999999999999999 7777654
No 202
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=6.3e-36 Score=332.43 Aligned_cols=261 Identities=23% Similarity=0.363 Sum_probs=213.0
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++.+.||.|++|.||++.+..+|+.||+|.+..... .......+.+|+.+++.++|+||+++++++......|+||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQE-DEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVF 80 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccc-cccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEE
Confidence 579999999999999999999999999999999865422 2233456778999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec-CCcEEEEeccCccccCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~-~g~vkL~DFG~a~~~~~~~~~ 823 (998)
||++ ++|.+++.......+++..++.++.||+.||.|||++||+|+||+|+||+++. ++.+||+|||++.......
T Consensus 81 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~-- 157 (294)
T PLN00009 81 EYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV-- 157 (294)
T ss_pred eccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCc--
Confidence 9994 68888876655555788999999999999999999999999999999999985 5679999999985432110
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 902 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~ 902 (998)
.......+++.|+|||++.+. .++.++|||||||++|+|++|.+||........
T Consensus 158 -------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~ 212 (294)
T PLN00009 158 -------------------------RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDE 212 (294)
T ss_pred -------------------------cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 111233578899999998764 578899999999999999999999988776665
Q ss_pred HHHHHhCCC---------------------CCC------CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCcc
Q 001902 903 FANILHKDL---------------------KFP------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 955 (998)
Q Consensus 903 ~~~i~~~~~---------------------~~~------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 955 (998)
+..+..... .++ .....+.++.+++.+||+.+|.+||+ +.++++||||.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps----~~~~l~~~~~~ 288 (294)
T PLN00009 213 LFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRIT----ARAALEHEYFK 288 (294)
T ss_pred HHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcC----HHHHhcCchHh
Confidence 555432100 000 01235778899999999999999999 99999999999
Q ss_pred CCC
Q 001902 956 GVN 958 (998)
Q Consensus 956 ~~~ 958 (998)
.++
T Consensus 289 ~~~ 291 (294)
T PLN00009 289 DLG 291 (294)
T ss_pred HHh
Confidence 864
No 203
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=9.3e-36 Score=329.84 Aligned_cols=255 Identities=27% Similarity=0.470 Sum_probs=216.6
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
.|...+.||.|++|.||++.+..+++.+++|.+... .......+.+|+.+++.++|+||+++++++...+..|+|||
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e 96 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR---KQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVME 96 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc---chhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEe
Confidence 455567899999999999999889999999987633 23344567889999999999999999999999999999999
Q ss_pred cCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCC
Q 001902 746 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 825 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 825 (998)
|+++++|.+++.. ..++...+..++.||+.||+|||++||+||||+|+||+++.++.++|+|||++......
T Consensus 97 ~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~----- 168 (285)
T cd06648 97 FLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE----- 168 (285)
T ss_pred ccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccC-----
Confidence 9999999999876 34899999999999999999999999999999999999999999999999987432210
Q ss_pred CcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001902 826 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 905 (998)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~ 905 (998)
........|++.|+|||.+.+..++.++|||||||++|+|++|..||...+....+..
T Consensus 169 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~ 226 (285)
T cd06648 169 ----------------------VPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKR 226 (285)
T ss_pred ----------------------CcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHH
Confidence 0112234689999999999888899999999999999999999999988777666666
Q ss_pred HHhCCCCCC-CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 906 ILHKDLKFP-SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 906 i~~~~~~~~-~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
+.....+.. .....+..+.+|+.+||+.+|.+||+ +.++++||||+..
T Consensus 227 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~il~~~~~~~~ 275 (285)
T cd06648 227 IRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRAT----AAELLNHPFLAKA 275 (285)
T ss_pred HHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcC----HHHHccCcccccC
Confidence 655432222 22236789999999999999999999 9999999999874
No 204
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=4.9e-36 Score=331.07 Aligned_cols=261 Identities=26% Similarity=0.388 Sum_probs=209.0
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHH-HHhCCCCCccceeEEEeeCCeEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREI-LDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~i-l~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
++|++++.||+|+||.||++.+..+|+.||+|.++..... .....+..|+.+ ++.++||||+++++++..++.+|+|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv 78 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS--QEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWIC 78 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCc--HHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence 4799999999999999999999999999999998765321 223345556654 6667999999999999999999999
Q ss_pred EecCCCCchhHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 744 TDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~-~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
|||++ ++|.+++... ....+++..++.++.||+.||.|||++ +++||||||+||+++.++.+||+|||++......
T Consensus 79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 79 MEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 99995 7888777542 234689999999999999999999997 9999999999999999999999999998543210
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC----CCCCChhHHHHHHHHHHHHHcCCCCCCC
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG----AGHTSAVDWWALGILLYEMLYGYTPFRG 896 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~----~~~~~~sDIwSlG~il~eLltG~~Pf~~ 896 (998)
.......|+..|+|||++.+ ..++.++|+|||||++|+|++|..||..
T Consensus 158 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 209 (283)
T cd06617 158 ----------------------------VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDS 209 (283)
T ss_pred ----------------------------cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCc
Confidence 01122458889999999865 4567899999999999999999999975
Q ss_pred C-ChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChh
Q 001902 897 K-TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 960 (998)
Q Consensus 897 ~-~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~ 960 (998)
. .....+..+............++.++.+||.+||..+|.+||+ +.++++||||+.....
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~~~~ 270 (283)
T cd06617 210 WKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPN----YPELLQHPFFELHLSK 270 (283)
T ss_pred cccCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcC----HHHHhcCchhhhcccc
Confidence 3 2334444444432222122346789999999999999999999 9999999999986543
No 205
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=5.1e-36 Score=333.73 Aligned_cols=259 Identities=27% Similarity=0.407 Sum_probs=213.3
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeeccccc--ChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~--~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
+|.+.+.||.|++|.||+|.+..+++.|++|.+...... .......+..|+.+++.++|+||+++++++...+.+++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 488889999999999999999989999999999865433 122345567899999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
|||+ +++|.+++.... ..+++..+..++.||++||.|||++||+|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~-- 156 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN-- 156 (298)
T ss_pred Eccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC--
Confidence 9999 999999997653 369999999999999999999999999999999999999999999999999985543110
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 902 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~ 902 (998)
.......+++.|+|||.+.+ ..++.++|||||||++|+|++|.+||.+.+....
T Consensus 157 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~ 211 (298)
T cd07841 157 -------------------------RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQ 211 (298)
T ss_pred -------------------------ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHH
Confidence 01122356888999999865 4578899999999999999999988987776555
Q ss_pred HHHHHhCCCC-----C------------------C---CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 903 FANILHKDLK-----F------------------P---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 903 ~~~i~~~~~~-----~------------------~---~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
+..+...... + + .....+..+.+||.+||..||.+||| +.++++||||++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s----~~e~l~~~~~~~ 287 (298)
T cd07841 212 LGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRIT----ARQALEHPYFSN 287 (298)
T ss_pred HHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcC----HHHHhhCccccC
Confidence 5554321000 0 0 01234678899999999999999999 999999999998
Q ss_pred C
Q 001902 957 V 957 (998)
Q Consensus 957 ~ 957 (998)
.
T Consensus 288 ~ 288 (298)
T cd07841 288 D 288 (298)
T ss_pred C
Confidence 4
No 206
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=5.6e-36 Score=332.23 Aligned_cols=256 Identities=27% Similarity=0.456 Sum_probs=205.8
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.++|++.+.||+|++|.||++.+..+++.||+|.+...... .....+.+|+.+++.++|+||+++++++...+..|+|
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE--GAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLV 81 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc--CCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEE
Confidence 46899999999999999999999889999999998754321 1223456799999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
|||++ ++|.+++.+.. ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 82 ~e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~--- 156 (291)
T cd07844 82 FEYLD-TDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVP--- 156 (291)
T ss_pred EecCC-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCC---
Confidence 99996 58999887653 35899999999999999999999999999999999999999999999999987432100
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCCCC-hHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKT-RQK 901 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~~~-~~~ 901 (998)
........++..|+|||++.+ ..++.++|||||||++|+|++|..||.+.. ..+
T Consensus 157 ------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~ 212 (291)
T cd07844 157 ------------------------SKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVED 212 (291)
T ss_pred ------------------------CccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHH
Confidence 001122346889999999876 457889999999999999999999997665 233
Q ss_pred HHHHHHhC-------------------CCCCC---------CCCCCc--HHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 902 TFANILHK-------------------DLKFP---------SSTPTS--LHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 902 ~~~~i~~~-------------------~~~~~---------~~~~~s--~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
....+... ....+ .....+ .++.+++.+||+.+|.+||+ +.++++|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps----~~e~l~~ 288 (291)
T cd07844 213 QLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRIS----AAEAMKH 288 (291)
T ss_pred HHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccC----HHHHhcC
Confidence 33222210 00000 001223 67889999999999999999 9999999
Q ss_pred CCc
Q 001902 952 PFF 954 (998)
Q Consensus 952 p~f 954 (998)
|||
T Consensus 289 ~~f 291 (291)
T cd07844 289 PYF 291 (291)
T ss_pred CCC
Confidence 998
No 207
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.2e-35 Score=322.73 Aligned_cols=255 Identities=30% Similarity=0.453 Sum_probs=214.4
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccc--cChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--LNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~--~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
+|+..+.||+|++|.||+|.+..++..|++|.+..... ........+.+|+.+++.++|+||+++++++.....+|+|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 47788999999999999999988999999999875322 1234456788999999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
|||+++++|.+++.+. ..+++..+..++.||+.||+|||+.||+|+||+|+||+++.++.+||+|||++.......
T Consensus 81 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~-- 156 (258)
T cd06632 81 LELVPGGSLAKLLKKY--GSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS-- 156 (258)
T ss_pred EEecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccc--
Confidence 9999999999999765 358899999999999999999999999999999999999999999999999885432110
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCC-CCChhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 902 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~ 902 (998)
......|+..|+|||.+.... ++.++|+|||||++|+|++|..||........
T Consensus 157 --------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~ 210 (258)
T cd06632 157 --------------------------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAA 210 (258)
T ss_pred --------------------------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHH
Confidence 112346889999999997766 88999999999999999999999987765555
Q ss_pred HHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 903 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 903 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
...+.............+..+.+|+.+||..+|.+||+ +.+++.|||+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~~l~~~~~ 258 (258)
T cd06632 211 VFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPT----AAELLEHPFV 258 (258)
T ss_pred HHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcC----HHHHhcCCCC
Confidence 54444322111222346788999999999999999999 9999999996
No 208
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=7.4e-36 Score=325.58 Aligned_cols=258 Identities=29% Similarity=0.471 Sum_probs=219.7
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++.+.||.|++|.||+|.+..+++.|++|++...... .....+.+|+.++..++|+||+++++++...+.+++||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE--EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVL 78 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEE
Confidence 3688999999999999999999999999999998765321 44677889999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
||+++++|.+++... ..+++..+..++.||+.||.|||+ .|++|+||+|+||+++.++.++|+|||++.......
T Consensus 79 e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~-- 154 (264)
T cd06623 79 EYMDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTL-- 154 (264)
T ss_pred EecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCC--
Confidence 999999999999765 558999999999999999999999 999999999999999999999999999885432111
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCC---hH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT---RQ 900 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~---~~ 900 (998)
.......++..|+|||.+.+..++.++|+||||+++|+|++|..||.... ..
T Consensus 155 -------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~ 209 (264)
T cd06623 155 -------------------------DQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFF 209 (264)
T ss_pred -------------------------CcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHH
Confidence 01123458889999999998889999999999999999999999998773 34
Q ss_pred HHHHHHHhCCCCCCCCCC-CcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCC
Q 001902 901 KTFANILHKDLKFPSSTP-TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 958 (998)
Q Consensus 901 ~~~~~i~~~~~~~~~~~~-~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 958 (998)
.....+..... ...... .+..+.++|.+||..+|++||+ +.++++||||+..+
T Consensus 210 ~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~R~~----~~~ll~~~~~~~~~ 263 (264)
T cd06623 210 ELMQAICDGPP-PSLPAEEFSPEFRDFISACLQKDPKKRPS----AAELLQHPFIKKAD 263 (264)
T ss_pred HHHHHHhcCCC-CCCCcccCCHHHHHHHHHHccCChhhCCC----HHHHHhCHHHHhcc
Confidence 44444443332 222233 6788999999999999999999 99999999998764
No 209
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.9e-37 Score=344.74 Aligned_cols=262 Identities=29% Similarity=0.508 Sum_probs=232.5
Q ss_pred ccccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC
Q 001902 659 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 738 (998)
Q Consensus 659 ~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 738 (998)
..+...+.|.+.+.||+|.|+.|.++++.-++..||||++.+... +......+.+|+++|+.++|||||+++.+.....
T Consensus 50 ~~~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~l-n~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~ 128 (596)
T KOG0586|consen 50 DDSNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQL-NPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEA 128 (596)
T ss_pred cccccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhccc-ChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecc
Confidence 344556789999999999999999999999999999999988654 4444455889999999999999999999999999
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccC
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 818 (998)
.+|+||||+-+|.+++++.+++ .+.+..++.++.|++.|++|||+++|||||||++|||++.+.++||+|||++..+.
T Consensus 129 ~lylV~eya~~ge~~~yl~~~g--r~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~ 206 (596)
T KOG0586|consen 129 TLYLVMEYASGGELFDYLVKHG--RMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFD 206 (596)
T ss_pred eeEEEEEeccCchhHHHHHhcc--cchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeec
Confidence 9999999999999999998873 47779999999999999999999999999999999999999999999999996543
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCC-CChhHHHHHHHHHHHHHcCCCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGK 897 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-~~~sDIwSlG~il~eLltG~~Pf~~~ 897 (998)
. .....+++|++.|.|||++.+..| .+.+|+||+|++||-|++|.+||.+.
T Consensus 207 ~----------------------------~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~ 258 (596)
T KOG0586|consen 207 Y----------------------------GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQ 258 (596)
T ss_pred c----------------------------cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCc
Confidence 1 123356799999999999999877 46999999999999999999999999
Q ss_pred ChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 898 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 898 ~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
+-.+...+.+.+.+..|.. .+.++.+||+++|-.+|.+|++ ++++.+|.|..-.
T Consensus 259 ~lk~Lr~rvl~gk~rIp~~--ms~dce~lLrk~lvl~Pskr~~----~dqim~~~W~n~~ 312 (596)
T KOG0586|consen 259 NLKELRPRVLRGKYRIPFY--MSCDCEDLLRKFLVLNPSKRGP----CDQIMKDRWRNDL 312 (596)
T ss_pred ccccccchheeeeecccce--eechhHHHHHHhhccCccccCC----HHHhhhhcccchh
Confidence 8888777777777666554 5678999999999999999999 9999999998863
No 210
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=6.4e-36 Score=363.78 Aligned_cols=270 Identities=25% Similarity=0.335 Sum_probs=210.5
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++++.||+|+||.||+|.+..+|+.||+|++............++.+|+.+++.++||||+++++++...+..|+||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 68999999999999999999999999999999998654444555677889999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCC---------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcc
Q 001902 745 DYCPGGELFLLLDRQP---------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 815 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~---------~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~ 815 (998)
||++|++|.+++.... ...++...+..++.||+.||+|||++||+||||||+|||++.+|.++|+|||++.
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk 161 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAI 161 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcce
Confidence 9999999999986421 1235567788999999999999999999999999999999999999999999996
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCC
Q 001902 816 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 895 (998)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~ 895 (998)
............ ..................+||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus 162 ~i~~~~~~~~~l---------~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~ 232 (932)
T PRK13184 162 FKKLEEEDLLDI---------DVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYR 232 (932)
T ss_pred eccccccccccc---------ccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCC
Confidence 642111100000 00000000111122234679999999999999999999999999999999999999998
Q ss_pred CCChHHHHHHH-HhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChh
Q 001902 896 GKTRQKTFANI-LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 943 (998)
Q Consensus 896 ~~~~~~~~~~i-~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 943 (998)
........... .............+..+.+++.+||..||.+|++..+
T Consensus 233 ~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~e 281 (932)
T PRK13184 233 RKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQ 281 (932)
T ss_pred CcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHH
Confidence 76544333221 1111112222356788999999999999999998544
No 211
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1e-35 Score=330.21 Aligned_cols=257 Identities=28% Similarity=0.388 Sum_probs=211.8
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeC-----
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK----- 737 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~----- 737 (998)
.++|.+.+.||+|+||.||+|.+..+++.+|+|++.... .....+..|+.+++++ +||||+++++++...
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 96 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS----DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVG 96 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc----cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCC
Confidence 478999999999999999999999999999999986431 2234567789999998 899999999998643
Q ss_pred CeEEEEEecCCCCchhHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcc
Q 001902 738 THVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 815 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~ 815 (998)
...|+||||+++++|.++++. .....+++..++.++.|++.||.|||+.||+|+||||+||+++.++.++|+|||++.
T Consensus 97 ~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~ 176 (291)
T cd06639 97 GQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSA 176 (291)
T ss_pred CeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccch
Confidence 468999999999999998864 223568999999999999999999999999999999999999999999999999885
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-----CCCChhHHHHHHHHHHHHHcC
Q 001902 816 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-----GHTSAVDWWALGILLYEMLYG 890 (998)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-----~~~~~sDIwSlG~il~eLltG 890 (998)
...... .......|+..|+|||++... .++.++|||||||++|+|++|
T Consensus 177 ~~~~~~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g 229 (291)
T cd06639 177 QLTSTR---------------------------LRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDG 229 (291)
T ss_pred hccccc---------------------------ccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhC
Confidence 432110 011234688999999998643 357899999999999999999
Q ss_pred CCCCCCCChHHHHHHHHhCCCC-CCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCcc
Q 001902 891 YTPFRGKTRQKTFANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 955 (998)
Q Consensus 891 ~~Pf~~~~~~~~~~~i~~~~~~-~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 955 (998)
++||...+....+..+...... .......+..+.+||.+||..+|++||+ +.++++||||+
T Consensus 230 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~il~~~~~~ 291 (291)
T cd06639 230 DPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPS----VTHLLEHPFIK 291 (291)
T ss_pred CCCCCCCcHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcC----HHHHhcCcccC
Confidence 9999887766666665544321 2222345678999999999999999999 99999999995
No 212
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=2.5e-36 Score=332.63 Aligned_cols=258 Identities=27% Similarity=0.396 Sum_probs=216.7
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
..|+.++.||.|+||.||++.+..++..||+|.+.... .......+.+|+.+++.++|+||+++++++...+..|+||
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIM 81 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc--chHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEE
Confidence 35888899999999999999998899999999987542 2334567889999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||+++++|.+++.. ..+++..++.++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~--- 155 (277)
T cd06642 82 EYLGGGSALDLLKP---GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--- 155 (277)
T ss_pred EccCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcc---
Confidence 99999999998864 358999999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 904 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~ 904 (998)
.......|+..|+|||++.+..++.++|+|||||++|+|++|..||..........
T Consensus 156 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~ 211 (277)
T cd06642 156 ------------------------IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLF 211 (277)
T ss_pred ------------------------hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHh
Confidence 01123468899999999999889999999999999999999999998766555444
Q ss_pred HHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCCh
Q 001902 905 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 959 (998)
Q Consensus 905 ~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 959 (998)
.+.....+ ......+..+.+|+.+||..+|++||+ +.++++||||....+
T Consensus 212 ~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~~~ 261 (277)
T cd06642 212 LIPKNSPP-TLEGQYSKPFKEFVEACLNKDPRFRPT----AKELLKHKFITRYTK 261 (277)
T ss_pred hhhcCCCC-CCCcccCHHHHHHHHHHccCCcccCcC----HHHHHHhHHHHHHhh
Confidence 43333221 112345778999999999999999999 999999999987543
No 213
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=7.1e-36 Score=330.41 Aligned_cols=257 Identities=26% Similarity=0.376 Sum_probs=209.2
Q ss_pred ccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEe-----e
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQ-----T 736 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~-----~ 736 (998)
..++|++++.||+|+||.||+|.+..+++.+|+|++.... .....+.+|+.+++.+ +|+||+++++++. .
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 91 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH----DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKN 91 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc----chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCC
Confidence 3568999999999999999999999999999999876421 1234567899999999 7999999999873 4
Q ss_pred CCeEEEEEecCCCCchhHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCc
Q 001902 737 KTHVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 814 (998)
Q Consensus 737 ~~~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a 814 (998)
.+.+++||||+++++|.+++... ....+++..+..++.|++.||.|||+.+|+||||||+||+++.++.++|+|||++
T Consensus 92 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~ 171 (286)
T cd06638 92 GDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVS 171 (286)
T ss_pred CCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCce
Confidence 56799999999999999987632 2345889999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-----CCCCChhHHHHHHHHHHHHHc
Q 001902 815 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLY 889 (998)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----~~~~~~sDIwSlG~il~eLlt 889 (998)
....... .......|++.|+|||++.. ..++.++|||||||++|+|++
T Consensus 172 ~~~~~~~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~ 224 (286)
T cd06638 172 AQLTSTR---------------------------LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGD 224 (286)
T ss_pred eecccCC---------------------------CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhc
Confidence 5432110 01123468999999999853 457889999999999999999
Q ss_pred CCCCCCCCChHHHHHHHHhCCC-CCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 890 GYTPFRGKTRQKTFANILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 890 G~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
|..||........+..+..... ........+..+.+||.+||+.||++||+ +.++++|+||
T Consensus 225 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~ell~~~~~ 286 (286)
T cd06638 225 GDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPT----VSDLLQHVFI 286 (286)
T ss_pred CCCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCC----HHHHhhcccC
Confidence 9999988766555444333221 11122335678999999999999999999 9999999997
No 214
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=8.3e-36 Score=324.03 Aligned_cols=256 Identities=27% Similarity=0.472 Sum_probs=217.6
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
+|.+.+.||.|+||.||++.+..+|..+|+|.+..... .......+.+|+.+++.++|+||+++++.+.....+|+|||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 79 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKM-PVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVME 79 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhc-cchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEe
Confidence 48889999999999999999999999999999876432 22344567789999999999999999999999999999999
Q ss_pred cCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCc-EEEEeccCccccCCCCCCC
Q 001902 746 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH-VSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~-vkL~DFG~a~~~~~~~~~~ 824 (998)
|+++++|.+++.+.....+++..+..++.||+.||.|||+.+++|+||||+||+++.++. ++|+|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~--- 156 (257)
T cd08225 80 YCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM--- 156 (257)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCc---
Confidence 999999999998765556899999999999999999999999999999999999998864 6999999885432110
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 904 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~ 904 (998)
.......|++.|+|||++.+..++.++|+||||+++|+|++|..||...+......
T Consensus 157 ------------------------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~ 212 (257)
T cd08225 157 ------------------------ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVL 212 (257)
T ss_pred ------------------------ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHH
Confidence 01122458999999999988889999999999999999999999998877766666
Q ss_pred HHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 905 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 905 ~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
.+...... +.....+..+.++|.+||..+|++||| +.++++||||
T Consensus 213 ~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~Rpt----~~~ll~~~~~ 257 (257)
T cd08225 213 KICQGYFA-PISPNFSRDLRSLISQLFKVSPRDRPS----ITSILKRPFL 257 (257)
T ss_pred HHhcccCC-CCCCCCCHHHHHHHHHHhccChhhCcC----HHHHhhCCCC
Confidence 55544332 223456788999999999999999999 9999999997
No 215
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.5e-35 Score=328.44 Aligned_cols=260 Identities=28% Similarity=0.447 Sum_probs=212.8
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEee--CCeEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTHVCL 742 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~~~~l 742 (998)
++|+..+.||.|++|.||+|.+..+++.+|+|.+.... .......+.+|+++++.++||||++++++|.. .+.+|+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 78 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDP--NPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGI 78 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCC--chHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEE
Confidence 46899999999999999999999999999999987542 22445678899999999999999999998864 347899
Q ss_pred EEecCCCCchhHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 743 ITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 743 V~E~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
||||+++++|.+++.. .....++...+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 158 (287)
T cd06621 79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS 158 (287)
T ss_pred EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccccccccc
Confidence 9999999999988754 22355899999999999999999999999999999999999999999999999997432100
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCC---
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK--- 897 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~--- 897 (998)
......++..|+|||.+.+..++.++|||||||++|+|++|..||...
T Consensus 159 -----------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~ 209 (287)
T cd06621 159 -----------------------------LAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEP 209 (287)
T ss_pred -----------------------------ccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCC
Confidence 011335788999999999989999999999999999999999999865
Q ss_pred --ChHHHHHHHHhCCC-CCCCC----CCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCCh
Q 001902 898 --TRQKTFANILHKDL-KFPSS----TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 959 (998)
Q Consensus 898 --~~~~~~~~i~~~~~-~~~~~----~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 959 (998)
...+....+..... ..+.. ...+..+.+||.+||..+|++||| +.++++||||+...-
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~eil~~~~~~~~~~ 274 (287)
T cd06621 210 PLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPT----PWDMLEHPWIKAQMK 274 (287)
T ss_pred CCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCC----HHHHHhCcccccccc
Confidence 22333333333221 11111 224568899999999999999999 999999999987544
No 216
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-37 Score=330.90 Aligned_cols=255 Identities=25% Similarity=0.420 Sum_probs=211.6
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCC--C----CccceeEEEeeC
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH--P----FVPALYASFQTK 737 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h--~----nIv~l~~~~~~~ 737 (998)
..+|.++..||+|.||.|-.+.+.+++..+|||+++.- ..-.+...-|+++|.++.+ | -+|++.+||...
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V----~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyr 163 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV----DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYR 163 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH----HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhcc
Confidence 68999999999999999999999999999999998742 1233455668999999932 2 478889999999
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec---------------
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG--------------- 802 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~--------------- 802 (998)
++.|||+|.+ |.+++++|..+...+++..+++.++.||+++++|||+.+++|.||||+|||+.+
T Consensus 164 ghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~ 242 (415)
T KOG0671|consen 164 GHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCF 242 (415)
T ss_pred CceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccce
Confidence 9999999999 889999999988889999999999999999999999999999999999999953
Q ss_pred -----CCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHH
Q 001902 803 -----NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 877 (998)
Q Consensus 803 -----~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDI 877 (998)
+-.|+|+|||.|.... ..+..++.|..|.|||++.+-+++.++||
T Consensus 243 ~r~~ks~~I~vIDFGsAtf~~------------------------------e~hs~iVsTRHYRAPEViLgLGwS~pCDv 292 (415)
T KOG0671|consen 243 IRPLKSTAIKVIDFGSATFDH------------------------------EHHSTIVSTRHYRAPEVILGLGWSQPCDV 292 (415)
T ss_pred eccCCCcceEEEecCCcceec------------------------------cCcceeeeccccCCchheeccCcCCccCc
Confidence 2348999999884321 12356789999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCCCCChHH---HHHHHHh------------------CCCCCCCC--------------------
Q 001902 878 WALGILLYEMLYGYTPFRGKTRQK---TFANILH------------------KDLKFPSS-------------------- 916 (998)
Q Consensus 878 wSlG~il~eLltG~~Pf~~~~~~~---~~~~i~~------------------~~~~~~~~-------------------- 916 (998)
||+||||+||++|...|...++.+ ++..|+. +.+.++..
T Consensus 293 WSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~ 372 (415)
T KOG0671|consen 293 WSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYM 372 (415)
T ss_pred eeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHh
Confidence 999999999999999999887665 3333322 11111111
Q ss_pred ---CCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 917 ---TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 917 ---~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
......+.+||++||..||.+|+| +.|+|.||||+..
T Consensus 373 ~~~d~e~~~LfDLl~~mL~fDP~~RiT----l~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 373 LQDDLEHVQLFDLLRRMLEFDPARRIT----LREALSHPFFARL 412 (415)
T ss_pred ccCcHHHhHHHHHHHHHHccCcccccc----HHHHhcCHHhhcC
Confidence 001125689999999999999999 9999999999874
No 217
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=8.9e-36 Score=331.16 Aligned_cols=258 Identities=22% Similarity=0.382 Sum_probs=208.4
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCccceeEEEeeCCe----
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTH---- 739 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~---- 739 (998)
++|++.+.||+|+||.||+|.+..+++.||+|.+..... .......+.+|+.+++.+. |+||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 79 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMD-EEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP 79 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhcc-ccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence 369999999999999999999999999999998875422 2223356778999999995 6999999999877665
Q ss_pred -EEEEEecCCCCchhHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec-CCcEEEEeccCc
Q 001902 740 -VCLITDYCPGGELFLLLDRQP---TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLS 814 (998)
Q Consensus 740 -~~lV~E~~~ggsL~~~l~~~~---~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~-~g~vkL~DFG~a 814 (998)
.|+||||+++ +|.+++.... ...+++..++.++.||+.||.|||++||+||||||+||+++. ++.+||+|||++
T Consensus 80 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~ 158 (295)
T cd07837 80 SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLG 158 (295)
T ss_pred eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccc
Confidence 8999999975 7888876532 245899999999999999999999999999999999999998 899999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCC
Q 001902 815 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTP 893 (998)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~P 893 (998)
....... .......+++.|+|||++.+ ..++.++||||||+++|+|++|..|
T Consensus 159 ~~~~~~~---------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~ 211 (295)
T cd07837 159 RAFSIPV---------------------------KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPL 211 (295)
T ss_pred eecCCCc---------------------------cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCC
Confidence 5432110 01122357889999999865 4578899999999999999999999
Q ss_pred CCCCChHHHHHHHHhCCC-----C------------CCC---------CCCCcHHHHHHHHHccccCccCcCCChhcHHH
Q 001902 894 FRGKTRQKTFANILHKDL-----K------------FPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 947 (998)
Q Consensus 894 f~~~~~~~~~~~i~~~~~-----~------------~~~---------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~e 947 (998)
|.+.+....+..+..... . ++. ....+..+.+||.+||..||.+||+ +.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~----~~e 287 (295)
T cd07837 212 FPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRIS----AKA 287 (295)
T ss_pred CCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCC----HHH
Confidence 998777666555443100 0 000 1236778999999999999999999 999
Q ss_pred HHcCCCcc
Q 001902 948 IKKHPFFK 955 (998)
Q Consensus 948 lL~Hp~f~ 955 (998)
++.||||+
T Consensus 288 il~~~~~~ 295 (295)
T cd07837 288 ALTHPYFD 295 (295)
T ss_pred HhcCCCcC
Confidence 99999985
No 218
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-37 Score=338.02 Aligned_cols=258 Identities=29% Similarity=0.476 Sum_probs=220.8
Q ss_pred cccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEecCCCC
Q 001902 671 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 750 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~gg 750 (998)
+.||+|.||+||-+.++++|+.||||++.+....... ..++.+|..||..++||.||.+--.|++.+.+++|||.+.|
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kq-esqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G- 647 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQ-ESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG- 647 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCch-HHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc-
Confidence 6799999999999999999999999999987654443 37889999999999999999999999999999999999955
Q ss_pred chhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecC---CcEEEEeccCccccCCCCCCCCCc
Q 001902 751 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSCLTSCKPQLLLPT 827 (998)
Q Consensus 751 sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~---g~vkL~DFG~a~~~~~~~~~~~~~ 827 (998)
++.+++-....+.+++...+.++.||+.||.|||.+||+|+||||+|||+.+. -.+||||||+|+.++...
T Consensus 648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks------ 721 (888)
T KOG4236|consen 648 DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS------ 721 (888)
T ss_pred hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhh------
Confidence 54455444445679999999999999999999999999999999999999854 479999999998765221
Q ss_pred chhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHH
Q 001902 828 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANIL 907 (998)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~ 907 (998)
...+++|||.|+|||++....|+..-|+||.|+|+|--++|..||.... ++-.+|.
T Consensus 722 ----------------------FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdE--dIndQIQ 777 (888)
T KOG4236|consen 722 ----------------------FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDE--DINDQIQ 777 (888)
T ss_pred ----------------------hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCcc--chhHHhh
Confidence 2347899999999999999999999999999999999999999997653 3445555
Q ss_pred hCCCCCC--CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC-Chhhhhc
Q 001902 908 HKDLKFP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV-NWALVRC 964 (998)
Q Consensus 908 ~~~~~~~--~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~-~~~~~~~ 964 (998)
...+-+| .+..++.++.+||..+|+..-.+|.+ +.+.|.|||+++. -|..++.
T Consensus 778 NAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRys----vdk~lsh~Wlq~yq~w~DLRe 833 (888)
T KOG4236|consen 778 NAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYS----VDKSLSHPWLQDYQTWLDLRE 833 (888)
T ss_pred ccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcc----hHhhccchhhhcchHHHHHHH
Confidence 5554444 34568999999999999999999999 9999999999984 3555543
No 219
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=9.2e-36 Score=328.32 Aligned_cols=255 Identities=21% Similarity=0.309 Sum_probs=212.5
Q ss_pred ccCCcccccccCCCCceeEEEEEEcc-----CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 737 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~~-----~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~ 737 (998)
..++|.+.+.||+|+||.||+|.+.. +++.||+|.++... .......+.+|+++++.++|+||+++++++...
T Consensus 3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 80 (280)
T cd05049 3 QRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA--SNDARKDFEREAELLTNFQHENIVKFYGVCTEG 80 (280)
T ss_pred ChHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC--CHHHHHHHHHHHHHHHhcCCCCchheeeEEecC
Confidence 35679999999999999999998743 46889999987542 233456888999999999999999999999999
Q ss_pred CeEEEEEecCCCCchhHHHhhCC------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCc
Q 001902 738 THVCLITDYCPGGELFLLLDRQP------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 805 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~------------~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~ 805 (998)
...|+||||+++++|.+++.... ...+++..+..++.||+.||.|||++|++||||||+||+++.++.
T Consensus 81 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 81 DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLV 160 (280)
T ss_pred CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCe
Confidence 99999999999999999997542 234788999999999999999999999999999999999999999
Q ss_pred EEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHH
Q 001902 806 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 885 (998)
Q Consensus 806 vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~ 885 (998)
++|+|||++........ ........+++.|+|||++.+..++.++|||||||++|
T Consensus 161 ~kl~d~g~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 215 (280)
T cd05049 161 VKIGDFGMSRDVYTTDY-------------------------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLW 215 (280)
T ss_pred EEECCcccceecccCcc-------------------------eecCCCCcccceecChhhhccCCcchhhhHHHHHHHHH
Confidence 99999999854321100 01112334678899999999999999999999999999
Q ss_pred HHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHH
Q 001902 886 EMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 949 (998)
Q Consensus 886 eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL 949 (998)
+|++ |..||.+.+.......+..+....+ ....+..+.+|+.+||..||.+||+ +.+++
T Consensus 216 e~~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rp~----~~eil 275 (280)
T cd05049 216 EIFTYGKQPWYGLSNEEVIECITQGRLLQR-PRTCPSEVYDIMLGCWKRDPQQRIN----IKDIH 275 (280)
T ss_pred HHHhcCCCCCCCCCHHHHHHHHHcCCcCCC-CCCCCHHHHHHHHHHcCCCcccCCC----HHHHH
Confidence 9998 9999998888777777766544332 3457889999999999999999999 55554
No 220
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.6e-35 Score=323.10 Aligned_cols=259 Identities=29% Similarity=0.532 Sum_probs=215.9
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
+|.+.+.||+|+||.||++.+..+++.|++|.++.... .......+.+|+.+++.++|+||+++++++...+.+++|+|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDN-DPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME 79 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECccc-chHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence 58899999999999999999988999999999986533 24567788999999999999999999999999999999999
Q ss_pred cCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCC
Q 001902 746 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 825 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 825 (998)
|+++++|.+++... ..+++..++.++.|++.||.|||+.||+|+||+|+||+++.++.+||+|||++..........
T Consensus 80 ~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~- 156 (264)
T cd06626 80 YCSGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM- 156 (264)
T ss_pred cCCCCcHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc-
Confidence 99999999999764 448899999999999999999999999999999999999999999999999986543211100
Q ss_pred CcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCC---CCChhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001902 826 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG---HTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 902 (998)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~---~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~ 902 (998)
........++..|+|||++.+.. ++.++||||||+++|+|++|..||........
T Consensus 157 ----------------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~ 214 (264)
T cd06626 157 ----------------------GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQ 214 (264)
T ss_pred ----------------------cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHH
Confidence 00012346889999999998766 78899999999999999999999976643322
Q ss_pred HH-HHHh-CCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 903 FA-NILH-KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 903 ~~-~i~~-~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
.. .+.. ....+|.....+..+.+||.+||+.+|.+||+ +.+++.|||+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~----~~~i~~~~~~ 264 (264)
T cd06626 215 IMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPT----ASELLQHPFV 264 (264)
T ss_pred HHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCC----HHHHhcCCCC
Confidence 22 2222 22334444455888999999999999999999 9999999996
No 221
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=7.8e-36 Score=328.51 Aligned_cols=257 Identities=27% Similarity=0.458 Sum_probs=214.4
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC---CCCccceeEEEeeCCeEEE
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD---HPFVPALYASFQTKTHVCL 742 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~---h~nIv~l~~~~~~~~~~~l 742 (998)
.|++++.||.|+||.||+|.+..+++.||+|.+.... .......+.+|+.+++.++ ||||+++++++......|+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT--PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC--CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 4888999999999999999999999999999987542 2334567788999999996 9999999999999999999
Q ss_pred EEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCC
Q 001902 743 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 822 (998)
Q Consensus 743 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 822 (998)
||||+++++|.+++... .+++..+..++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||++.......
T Consensus 80 v~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~- 155 (277)
T cd06917 80 IMEYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS- 155 (277)
T ss_pred EEecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc-
Confidence 99999999999998653 58999999999999999999999999999999999999999999999999885532110
Q ss_pred CCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCCCChHH
Q 001902 823 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 901 (998)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~ 901 (998)
.......|+..|+|||.+.+ ..++.++|+|||||++|+|++|..||.+.....
T Consensus 156 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~ 209 (277)
T cd06917 156 --------------------------SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR 209 (277)
T ss_pred --------------------------cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh
Confidence 11223468999999999865 456889999999999999999999998876655
Q ss_pred HHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCC
Q 001902 902 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 958 (998)
Q Consensus 902 ~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 958 (998)
....+.....+.......+.++.+|+.+||..||.+||+ +.++++||||+...
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~----~~~il~~~~~~~~~ 262 (277)
T cd06917 210 AMMLIPKSKPPRLEDNGYSKLLREFVAACLDEEPKERLS----AEELLKSKWIKAHS 262 (277)
T ss_pred hhhccccCCCCCCCcccCCHHHHHHHHHHcCCCcccCcC----HHHHhhChHhhccc
Confidence 444333322211112236778999999999999999999 99999999998754
No 222
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.7e-36 Score=359.16 Aligned_cols=268 Identities=24% Similarity=0.310 Sum_probs=199.9
Q ss_pred cCCcccccccCCCCceeEEEEEEccCC-eEEEEE--------------EeecccccChhHHHHHHHHHHHHHhCCCCCcc
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSG-QYFAMK--------------AMDKGVMLNRNKVHRACAEREILDMLDHPFVP 728 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~-~~valK--------------~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv 728 (998)
.++|++++.||+|+||.||+|..+... ...+.| .+.+...........+.+|+.+|++++|+||+
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 578999999999999999998764332 222222 11111112223445678999999999999999
Q ss_pred ceeEEEeeCCeEEEEEecCCCCchhHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCc
Q 001902 729 ALYASFQTKTHVCLITDYCPGGELFLLLDRQP---TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 805 (998)
Q Consensus 729 ~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~---~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~ 805 (998)
++++++...+..|+||+++ +++|..++.... ........++.++.||+.||.|||++|||||||||+|||++.+|.
T Consensus 227 ~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~ 305 (501)
T PHA03210 227 KIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGK 305 (501)
T ss_pred cEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC
Confidence 9999999999999999999 567777765421 122446678889999999999999999999999999999999999
Q ss_pred EEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHH
Q 001902 806 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 885 (998)
Q Consensus 806 vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~ 885 (998)
+||+|||++..+.... .......+||+.|+|||++.+..++.++|||||||++|
T Consensus 306 vkL~DFGla~~~~~~~--------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 359 (501)
T PHA03210 306 IVLGDFGTAMPFEKER--------------------------EAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILL 359 (501)
T ss_pred EEEEeCCCceecCccc--------------------------ccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHH
Confidence 9999999986543110 01122457999999999999999999999999999999
Q ss_pred HHHcCCCCCC-CC--ChHHHHHHHHhCC----CCCC--------------------------CCCCCcHHHHHHHHHccc
Q 001902 886 EMLYGYTPFR-GK--TRQKTFANILHKD----LKFP--------------------------SSTPTSLHAKQLMYRLLH 932 (998)
Q Consensus 886 eLltG~~Pf~-~~--~~~~~~~~i~~~~----~~~~--------------------------~~~~~s~~l~~Ll~~~L~ 932 (998)
+|++|..++. .. .....+..++... ..++ .....+..+.++|.+||+
T Consensus 360 ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~ 439 (501)
T PHA03210 360 DMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLT 439 (501)
T ss_pred HHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhc
Confidence 9999876443 22 2222333222210 0011 011245567888999999
Q ss_pred cCccCcCCChhcHHHHHcCCCccCCChhhh
Q 001902 933 RDPKSRLGSHEGANEIKKHPFFKGVNWALV 962 (998)
Q Consensus 933 ~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~ 962 (998)
+||.+||| +.++|.||||........
T Consensus 440 ~DP~~Rps----a~elL~hp~f~~~~~~~~ 465 (501)
T PHA03210 440 FDWHLRPG----AAELLALPLFSAEEEEEI 465 (501)
T ss_pred cCcccCcC----HHHHhhChhhhcCCchHH
Confidence 99999999 999999999998765544
No 223
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=5.6e-36 Score=339.66 Aligned_cols=260 Identities=24% Similarity=0.365 Sum_probs=208.3
Q ss_pred ccccCCcccccccCCCCceeEEEEEEcc-----CCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASF 734 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~-----~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~ 734 (998)
++..++|++++.||.|+||.||+|.+.. +++.||+|++.... .......+..|+.++.++ +|+||+++++++
T Consensus 3 ~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~ 80 (337)
T cd05054 3 EFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA--TASEYKALMTELKILIHIGHHLNVVNLLGAC 80 (337)
T ss_pred ccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC--CHHHHHHHHHHHHHHHhhccCcchhheeeeE
Confidence 3445689999999999999999997543 45789999987432 223445677899999999 899999999987
Q ss_pred ee-CCeEEEEEecCCCCchhHHHhhCCC----------------------------------------------------
Q 001902 735 QT-KTHVCLITDYCPGGELFLLLDRQPT---------------------------------------------------- 761 (998)
Q Consensus 735 ~~-~~~~~lV~E~~~ggsL~~~l~~~~~---------------------------------------------------- 761 (998)
.. +..++++|||+++++|.+++.....
T Consensus 81 ~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (337)
T cd05054 81 TKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDE 160 (337)
T ss_pred ecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccch
Confidence 64 5678999999999999999864321
Q ss_pred -------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcchhhhhc
Q 001902 762 -------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRR 834 (998)
Q Consensus 762 -------~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~ 834 (998)
..+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++..+.....
T Consensus 161 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~------------ 228 (337)
T cd05054 161 EGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD------------ 228 (337)
T ss_pred hhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcc------------
Confidence 2578999999999999999999999999999999999999999999999999865321110
Q ss_pred ccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCC
Q 001902 835 HKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKF 913 (998)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~ 913 (998)
........++..|+|||++.+..++.++|||||||++|+|++ |..||.+....+.+...+......
T Consensus 229 -------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~ 295 (337)
T cd05054 229 -------------YVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRM 295 (337)
T ss_pred -------------hhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCC
Confidence 011123456778999999999999999999999999999997 999998765545454444443333
Q ss_pred CCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 914 PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 914 ~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
......+.++.+++.+||+.+|++||+ +.++++|
T Consensus 296 ~~~~~~~~~~~~l~~~cl~~~p~~RPs----~~ell~~ 329 (337)
T cd05054 296 RAPEYATPEIYSIMLDCWHNNPEDRPT----FSELVEI 329 (337)
T ss_pred CCCccCCHHHHHHHHHHccCChhhCcC----HHHHHHH
Confidence 333456788999999999999999999 7777664
No 224
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.2e-35 Score=325.12 Aligned_cols=255 Identities=26% Similarity=0.377 Sum_probs=209.9
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++.+.||+|+||.||+|.+..+++.||+|.+......+......+.+|+.+++.++||||+++++++...+..++||
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57999999999999999999999999999999887644445556677889999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCC
Q 001902 745 DYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 822 (998)
Q Consensus 745 E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 822 (998)
||+++++|.+++... ....+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~- 160 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT- 160 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchh-
Confidence 999999999888632 23458999999999999999999999999999999999999999999999999885432110
Q ss_pred CCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCCh--H
Q 001902 823 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR--Q 900 (998)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~--~ 900 (998)
.......|++.|+|||.+.+..++.++|+||||+++|+|++|..||..... .
T Consensus 161 --------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~ 214 (267)
T cd08228 161 --------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLF 214 (267)
T ss_pred --------------------------HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHH
Confidence 011234688999999999988899999999999999999999999976432 2
Q ss_pred HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 901 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 901 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
.....+.....+.......+..+.+|+.+||..+|++||+ +.++++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~----~~~vl~ 260 (267)
T cd08228 215 SLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPD----IGYVHQ 260 (267)
T ss_pred HHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcC----HHHHHH
Confidence 3333333322221112245678999999999999999999 666654
No 225
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=7.9e-36 Score=344.96 Aligned_cols=260 Identities=23% Similarity=0.305 Sum_probs=210.1
Q ss_pred ccccccCCcccccccCCCCceeEEEEEEccC-----CeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCccceeE
Q 001902 659 GEQINLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYA 732 (998)
Q Consensus 659 ~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~-----~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~ 732 (998)
...+..++|++.+.||+|+||.||+|.+... +..||+|++.... .......+.+|+.++++++ ||||+++++
T Consensus 31 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~ 108 (400)
T cd05105 31 RWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA--RSSEKQALMSELKIMTHLGPHLNIVNLLG 108 (400)
T ss_pred ceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhcCCCCCeeeEEE
Confidence 3445567899999999999999999987433 3579999987542 2334567889999999996 999999999
Q ss_pred EEeeCCeEEEEEecCCCCchhHHHhhCC----------------------------------------------------
Q 001902 733 SFQTKTHVCLITDYCPGGELFLLLDRQP---------------------------------------------------- 760 (998)
Q Consensus 733 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~---------------------------------------------------- 760 (998)
++...+.+|||||||++|+|.+++....
T Consensus 109 ~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (400)
T cd05105 109 ACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQY 188 (400)
T ss_pred EEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccccccccccccc
Confidence 9999999999999999999999886431
Q ss_pred ------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcE
Q 001902 761 ------------------------------------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 798 (998)
Q Consensus 761 ------------------------------------------~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NI 798 (998)
...+++..+..++.||+.||+|||+++|+||||||+||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Ni 268 (400)
T cd05105 189 VPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNV 268 (400)
T ss_pred chhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhE
Confidence 12477888899999999999999999999999999999
Q ss_pred EEecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHH
Q 001902 799 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 878 (998)
Q Consensus 799 Li~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIw 878 (998)
|++.++.+||+|||++........ ........+++.|+|||++.+..++.++|||
T Consensus 269 ll~~~~~~kL~DfGla~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diw 323 (400)
T cd05105 269 LLAQGKIVKICDFGLARDIMHDSN-------------------------YVSKGSTFLPVKWMAPESIFDNLYTTLSDVW 323 (400)
T ss_pred EEeCCCEEEEEeCCcceecccccc-------------------------ccccCCcCCCcceEChhhhcCCCCCchhhHH
Confidence 999999999999999854321100 0112234577899999999998999999999
Q ss_pred HHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcH
Q 001902 879 ALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGA 945 (998)
Q Consensus 879 SlG~il~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a 945 (998)
||||++|+|++ |..||........+...+......+.....+..+.+++.+||..||++||++.+++
T Consensus 324 SlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~ 391 (400)
T cd05105 324 SYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLS 391 (400)
T ss_pred HHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHH
Confidence 99999999996 99999876554444444444444444456788999999999999999999955543
No 226
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=7.1e-36 Score=332.85 Aligned_cols=256 Identities=28% Similarity=0.465 Sum_probs=216.4
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
..|.....||.|+||.||++.+..+++.||+|++.... ......+.+|+.+++.++||||+++++++...+..|+||
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~ 97 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLM 97 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecc---cchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEE
Confidence 35666778999999999999998899999999986532 223456788999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||+++++|..++.. ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 98 e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~---- 170 (297)
T cd06659 98 EFLQGGALTDIVSQ---TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD---- 170 (297)
T ss_pred ecCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccc----
Confidence 99999999998755 34899999999999999999999999999999999999999999999999988432210
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 904 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~ 904 (998)
........|+..|+|||++.+..++.++|||||||++|+|++|..||...+....+.
T Consensus 171 -----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~ 227 (297)
T cd06659 171 -----------------------VPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK 227 (297)
T ss_pred -----------------------cccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 011223568999999999998889999999999999999999999998877766665
Q ss_pred HHHhCCCC-CCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 905 NILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 905 ~i~~~~~~-~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
.+...... .......+..+.++|.+||+.+|.+||+ +.++++||||...
T Consensus 228 ~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps----~~~ll~~~~~~~~ 277 (297)
T cd06659 228 RLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERAT----AQELLDHPFLLQT 277 (297)
T ss_pred HHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcC----HHHHhhChhhccC
Confidence 55443222 2223346788999999999999999999 9999999999874
No 227
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=5.5e-36 Score=329.56 Aligned_cols=279 Identities=37% Similarity=0.639 Sum_probs=227.4
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCccceeEEEeeCCeEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lV 743 (998)
++|.+.+.||.|+||.||++.+..+++.|++|++.+...........+..|..++++++ |+||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 37999999999999999999999999999999998755544555677888999999998 99999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
|||+++++|.+++.+. ..++...+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.........
T Consensus 81 ~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~ 158 (280)
T cd05581 81 LEYAPNGELLQYIRKY--GSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSP 158 (280)
T ss_pred EcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCcccc
Confidence 9999999999999875 35999999999999999999999999999999999999999999999999998654322110
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 903 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~ 903 (998)
........ .................|+..|+|||++.+..++.++||||||++++++++|..||...+....+
T Consensus 159 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~ 231 (280)
T cd05581 159 ESNKGDAT-------NIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTF 231 (280)
T ss_pred ccCCCCCc-------cccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHH
Confidence 00000000 00000011112334567899999999998888899999999999999999999999988876666
Q ss_pred HHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 904 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 904 ~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
..+......++. ..+..+.+||.+||+.+|.+||++.+...++++||||
T Consensus 232 ~~~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 232 QKILKLEYSFPP--NFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred HHHHhcCCCCCC--ccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 776655544443 4578899999999999999999944444999999998
No 228
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.4e-37 Score=345.87 Aligned_cols=253 Identities=25% Similarity=0.373 Sum_probs=215.2
Q ss_pred ccccccCCCCceeEEEEEEccCCeEEEEEEeecc-cccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC--eEEEEE
Q 001902 668 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKG-VMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT--HVCLIT 744 (998)
Q Consensus 668 ~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~-~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~--~~~lV~ 744 (998)
+....||+|+|-+||+|.|..+|..||--.++.. ........+++..|+.+|+.|+|+||+++|.++.+.. .+-+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 4456799999999999999999988875544432 3345667789999999999999999999999997654 588999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC--CceeccCCCCcEEEec-CCcEEEEeccCccccCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ--GIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~--~IiHrDLkP~NILi~~-~g~vkL~DFG~a~~~~~~~ 821 (998)
|.+..|+|..|+++. +.++...++.|++||++||.|||++ .|||||||.+||+|+. .|.|||+|+|+|..+..
T Consensus 123 EL~TSGtLr~Y~kk~--~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~-- 198 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKH--RRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK-- 198 (632)
T ss_pred ecccCCcHHHHHHHh--ccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhc--
Confidence 999999999999886 4589999999999999999999998 5999999999999996 58999999999966431
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCC-ChH
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK-TRQ 900 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~-~~~ 900 (998)
.....++|||.|||||+.. ..|+..+||||||++++||+|+..||... +..
T Consensus 199 ---------------------------s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~A 250 (632)
T KOG0584|consen 199 ---------------------------SHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPA 250 (632)
T ss_pred ---------------------------cccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHH
Confidence 1234579999999999987 77999999999999999999999999875 556
Q ss_pred HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 901 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 901 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
.+|+++..+..+---..--.+++++||.+||.. .+.||| +.+||+||||..-
T Consensus 251 QIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~s----a~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 251 QIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLS----AKELLKDPFFDED 302 (632)
T ss_pred HHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccC----HHHHhhChhhccc
Confidence 777787776544332333478999999999998 899999 9999999999984
No 229
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.7e-35 Score=322.42 Aligned_cols=256 Identities=25% Similarity=0.474 Sum_probs=216.5
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEe--eCCeEEEE
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ--TKTHVCLI 743 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~--~~~~~~lV 743 (998)
+|++++.||.|+||.||+|.+..++..+|+|.+..... .......+..|+.+++.++|+||+++++++. ....+|++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM-TEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIV 79 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEE
Confidence 48899999999999999999999999999999876433 3445567888999999999999999999775 34678999
Q ss_pred EecCCCCchhHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHH-----HCCceeccCCCCcEEEecCCcEEEEeccCccc
Q 001902 744 TDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLH-----CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 816 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH-----~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~ 816 (998)
|||+++++|.+++... ....+++..++.++.||+.||.||| +.+++|+||||+||+++.++.+||+|||++..
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~ 159 (265)
T cd08217 80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKI 159 (265)
T ss_pred ehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccccc
Confidence 9999999999998753 2356899999999999999999999 89999999999999999999999999999855
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCC
Q 001902 817 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 896 (998)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~ 896 (998)
..... .......|++.|+|||++.+..++.++|+||||+++|+|++|..||..
T Consensus 160 ~~~~~---------------------------~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 212 (265)
T cd08217 160 LGHDS---------------------------SFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTA 212 (265)
T ss_pred ccCCc---------------------------ccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccC
Confidence 32110 001234689999999999988899999999999999999999999998
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 897 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 897 ~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
.+.......+...... ......+..+.+++.+||..+|.+||+ +.++++|||+
T Consensus 213 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~p~~Rp~----~~~il~~~~~ 265 (265)
T cd08217 213 RNQLQLASKIKEGKFR-RIPYRYSSELNEVIKSMLNVDPDKRPS----TEELLQLPLI 265 (265)
T ss_pred cCHHHHHHHHhcCCCC-CCccccCHHHHHHHHHHccCCcccCCC----HHHHhhCCCC
Confidence 8766666655554332 222346788999999999999999999 9999999996
No 230
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=3e-35 Score=330.32 Aligned_cols=256 Identities=26% Similarity=0.385 Sum_probs=217.0
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
-|...+.||+|+||.||+|.+..++..|++|++.............+.+|+.+++.++|+|++++++++...+..|+|||
T Consensus 22 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 101 (313)
T cd06633 22 IFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVME 101 (313)
T ss_pred HhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEe
Confidence 37777889999999999999999999999999976544444555678889999999999999999999999999999999
Q ss_pred cCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCC
Q 001902 746 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 825 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 825 (998)
|+. ++|.+++... ...+++..+..++.||+.+|.|||++||+|+||+|+||+++.++.++|+|||++....
T Consensus 102 ~~~-~~l~~~l~~~-~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~------- 172 (313)
T cd06633 102 YCL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSS------- 172 (313)
T ss_pred cCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccC-------
Confidence 994 6777777654 2458999999999999999999999999999999999999999999999999873211
Q ss_pred CcchhhhhcccCCCCcccccccccccccccCCCCcccchhhc---CCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001902 826 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 902 (998)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~ 902 (998)
......|+..|+|||++. ...++.++|||||||++|+|++|..||...+....
T Consensus 173 ------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~ 228 (313)
T cd06633 173 ------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA 228 (313)
T ss_pred ------------------------CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 112346889999999984 35678899999999999999999999988877666
Q ss_pred HHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCC
Q 001902 903 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 958 (998)
Q Consensus 903 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 958 (998)
...+.....+.......+..+.+|+.+||+.+|.+||+ +.+++.||||+...
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~----~~~~l~~~~~~~~~ 280 (313)
T cd06633 229 LYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPA----SAELLRHDFVRRDR 280 (313)
T ss_pred HHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcC----HHHHhcCcccCCCc
Confidence 66666554443334446778999999999999999999 99999999999754
No 231
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1e-35 Score=324.44 Aligned_cols=249 Identities=24% Similarity=0.318 Sum_probs=212.1
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
.+|++++.||.|+||.||+|.+.. ++.+++|++.... ......+..|+.+++.++|+||+++++++......++||
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 81 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDD---LLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIIT 81 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccc---hhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEE
Confidence 479999999999999999999977 8899999987542 223456788999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||+++++|.+++.......++...+..++.||+.||.|||++||+|+||||+||+++.++.+||+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~--- 158 (261)
T cd05148 82 ELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV--- 158 (261)
T ss_pred eecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCcc---
Confidence 99999999999987666679999999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCChHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTF 903 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~~~~ 903 (998)
.......++..|+|||++.+..++.++||||||+++|+|++ |..||.+.+..+.+
T Consensus 159 ------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~ 214 (261)
T cd05148 159 ------------------------YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVY 214 (261)
T ss_pred ------------------------ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHH
Confidence 00112335678999999988889999999999999999998 89999888877777
Q ss_pred HHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcH
Q 001902 904 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGA 945 (998)
Q Consensus 904 ~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a 945 (998)
..+... ...+....++..+.+++.+||+.||.+|||+.+++
T Consensus 215 ~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~ 255 (261)
T cd05148 215 DQITAG-YRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALR 255 (261)
T ss_pred HHHHhC-CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence 766643 34444556788999999999999999999954443
No 232
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.1e-35 Score=334.06 Aligned_cols=250 Identities=26% Similarity=0.428 Sum_probs=191.2
Q ss_pred cccCCCCceeEEEEEEcc--CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEe--eCCeEEEEEec
Q 001902 671 KPLGSGDTGSVHLVELCG--SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ--TKTHVCLITDY 746 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~--~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~--~~~~~~lV~E~ 746 (998)
.+||+|+||.||+|.+.. +++.||+|.+.... ....+.+|+.+++.++||||+++++++. ....+|+||||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-----ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY 81 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC-----CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence 579999999999999753 56899999887532 1235678999999999999999999885 45688999999
Q ss_pred CCCCchhHHHhhC-------CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEE----ecCCcEEEEeccCcc
Q 001902 747 CPGGELFLLLDRQ-------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL----QGNGHVSLTDFDLSC 815 (998)
Q Consensus 747 ~~ggsL~~~l~~~-------~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi----~~~g~vkL~DFG~a~ 815 (998)
+ +++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.
T Consensus 82 ~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 82 A-EHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred e-CCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 9 45787776521 12358899999999999999999999999999999999999 456799999999986
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCCC
Q 001902 816 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPF 894 (998)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf 894 (998)
....... .........||+.|+|||++.+. .++.++|||||||++|+|++|.+||
T Consensus 161 ~~~~~~~------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f 216 (317)
T cd07867 161 LFNSPLK------------------------PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 216 (317)
T ss_pred ccCCCcc------------------------cccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCc
Confidence 5431110 00112345789999999999774 5788999999999999999999999
Q ss_pred CCCChH---------HHHHHHHhC--------------CCCC----------------------CCCCCCcHHHHHHHHH
Q 001902 895 RGKTRQ---------KTFANILHK--------------DLKF----------------------PSSTPTSLHAKQLMYR 929 (998)
Q Consensus 895 ~~~~~~---------~~~~~i~~~--------------~~~~----------------------~~~~~~s~~l~~Ll~~ 929 (998)
...... ..+..+... ...+ ......+..+.+||.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 296 (317)
T cd07867 217 HCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQK 296 (317)
T ss_pred ccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHH
Confidence 753321 111111110 0000 0011234568899999
Q ss_pred ccccCccCcCCChhcHHHHHcCCCc
Q 001902 930 LLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 930 ~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
||..||.+||| +.++|+||||
T Consensus 297 ~l~~dP~~R~t----~~e~l~hp~f 317 (317)
T cd07867 297 LLTMDPTKRIT----SEQALQDPYF 317 (317)
T ss_pred HhccCcccccC----HHHHhcCCCC
Confidence 99999999999 9999999998
No 233
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1.2e-35 Score=325.87 Aligned_cols=248 Identities=31% Similarity=0.494 Sum_probs=200.7
Q ss_pred CCccccccc--CCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCeEE
Q 001902 665 QHFRPIKPL--GSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 665 ~~y~~~~~L--G~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~ 741 (998)
+.|.+.+.+ |.|+||.||++.++.++..+|+|.+....... .|+.+...+ +|+||++++++|...+..|
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--------~e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 85 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--------IEPMVHQLMKDNPNFIKLYYSVTTLKGHV 85 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--------hhHHHHHHhhcCCCEEEEEEEEecCCeeE
Confidence 466676666 99999999999999999999999987542211 122222222 7999999999999999999
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCC-cEEEEeccCccccCCC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCK 820 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g-~vkL~DFG~a~~~~~~ 820 (998)
+||||+++++|.+++... ..+++..+..++.||+.||.|||+.|++||||||+||+++.++ .++|+|||++.....
T Consensus 86 iv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~- 162 (267)
T PHA03390 86 LIMDYIKDGDLFDLLKKE--GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGT- 162 (267)
T ss_pred EEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCC-
Confidence 999999999999999775 3699999999999999999999999999999999999999988 999999998854321
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChH
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 900 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~ 900 (998)
.....|+..|+|||++.+..++.++|||||||++|+|++|..||......
T Consensus 163 ------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~ 212 (267)
T PHA03390 163 ------------------------------PSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDE 212 (267)
T ss_pred ------------------------------CccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcc
Confidence 11235889999999999989999999999999999999999999865433
Q ss_pred HH-HHHHHhC-CCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 901 KT-FANILHK-DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 901 ~~-~~~i~~~-~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
.. ...+... ....+.....+..+.+||.+||+.+|.+||+. ++++|+||||+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~---~~~~l~h~~~~~ 267 (267)
T PHA03390 213 ELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTN---YNEIIKHPFLKI 267 (267)
T ss_pred hhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCch---HHHHhcCCcccC
Confidence 21 1111111 11222233578899999999999999999961 599999999973
No 234
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.8e-35 Score=321.81 Aligned_cols=250 Identities=24% Similarity=0.380 Sum_probs=208.0
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.++|++.+.||+|+||.||++... .+..+|+|.+..... ....+.+|+.+++.++||||+++++++...+.+|+|
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 77 (256)
T cd05114 3 PSELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAM----SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIV 77 (256)
T ss_pred HHHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCc----cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEE
Confidence 457999999999999999999874 456899998764422 235678899999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
|||+++++|.+++.... ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.+||+|||.+.......
T Consensus 78 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~-- 154 (256)
T cd05114 78 TEFMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDE-- 154 (256)
T ss_pred EEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCc--
Confidence 99999999999987543 358999999999999999999999999999999999999999999999999885432100
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCChHHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKT 902 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~~~ 902 (998)
........++..|+|||++.+..++.++||||||+++|+|++ |+.||...+....
T Consensus 155 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~ 210 (256)
T cd05114 155 ------------------------YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEV 210 (256)
T ss_pred ------------------------eeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 001112235678999999988889999999999999999999 9999998888777
Q ss_pred HHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 903 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 903 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
+..+...... ......+..+.+|+.+||..+|.+||+ +.++++
T Consensus 211 ~~~i~~~~~~-~~~~~~~~~~~~li~~c~~~~p~~Rps----~~~l~~ 253 (256)
T cd05114 211 VEMISRGFRL-YRPKLASMTVYEVMYSCWHEKPEGRPT----FAELLR 253 (256)
T ss_pred HHHHHCCCCC-CCCCCCCHHHHHHHHHHccCCcccCcC----HHHHHH
Confidence 7777665432 223345778999999999999999999 666653
No 235
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=8.7e-36 Score=331.16 Aligned_cols=257 Identities=24% Similarity=0.366 Sum_probs=210.7
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC--CeEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THVC 741 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~~~~ 741 (998)
.++|++.+.||.|+||.||+|.+..+++.+++|.++..... ......+.+|+.++++++||||+++++++... +.+|
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence 35799999999999999999999989999999999754332 22334567899999999999999999998877 8999
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 821 (998)
+||||++ ++|.+++.... ..+++..++.++.||+.||+|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 83 lv~e~~~-~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 160 (293)
T cd07843 83 MVMEYVE-HDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL 160 (293)
T ss_pred EEehhcC-cCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc
Confidence 9999996 59999887643 358999999999999999999999999999999999999999999999999885533110
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCC-CCChhHHHHHHHHHHHHHcCCCCCCCCChH
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKTRQ 900 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-~~~~sDIwSlG~il~eLltG~~Pf~~~~~~ 900 (998)
.......+++.|+|||.+.+.. ++.++|||||||++|+|++|.+||......
T Consensus 161 ---------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~ 213 (293)
T cd07843 161 ---------------------------KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEI 213 (293)
T ss_pred ---------------------------cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChH
Confidence 1112345788999999987644 688999999999999999999999887766
Q ss_pred HHHHHHHhCCC-------------C------C---------CCCCC--CcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 901 KTFANILHKDL-------------K------F---------PSSTP--TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 901 ~~~~~i~~~~~-------------~------~---------~~~~~--~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
..+.++..... + + ..... .+..+.+||.+||+.+|++||| +.++++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t----~~ell~ 289 (293)
T cd07843 214 DQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRIS----AEDALK 289 (293)
T ss_pred HHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCC----HHHHhc
Confidence 65555432110 0 0 00011 3677899999999999999999 999999
Q ss_pred CCCc
Q 001902 951 HPFF 954 (998)
Q Consensus 951 Hp~f 954 (998)
||||
T Consensus 290 ~~~f 293 (293)
T cd07843 290 HPYF 293 (293)
T ss_pred CCCC
Confidence 9998
No 236
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.4e-35 Score=324.43 Aligned_cols=252 Identities=29% Similarity=0.405 Sum_probs=208.7
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++.+.||.|+||.||++.+..+++.+++|.+.............+.+|+.+++.++|+||+++++++...+..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 57999999999999999999999999999999887654444555677889999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCC
Q 001902 745 DYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 822 (998)
Q Consensus 745 E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 822 (998)
||+++++|.+++... ....+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~- 160 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT- 160 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCC-
Confidence 999999999988642 23468999999999999999999999999999999999999999999999999875432110
Q ss_pred CCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCCh--H
Q 001902 823 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR--Q 900 (998)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~--~ 900 (998)
.......|+..|+|||++.+..++.++|+||||+++|+|++|..||.+... .
T Consensus 161 --------------------------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~ 214 (267)
T cd08229 161 --------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY 214 (267)
T ss_pred --------------------------cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHH
Confidence 011234688999999999998899999999999999999999999976543 2
Q ss_pred HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChh
Q 001902 901 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 943 (998)
Q Consensus 901 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 943 (998)
.....+.....+.......+..+.+|+.+||..||.+|||+.+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ 257 (267)
T cd08229 215 SLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITY 257 (267)
T ss_pred HHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHH
Confidence 3333333322222222346789999999999999999999443
No 237
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2.2e-35 Score=327.23 Aligned_cols=253 Identities=23% Similarity=0.333 Sum_probs=210.5
Q ss_pred cccCCcccccccCCCCceeEEEEEE-----ccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEee
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVEL-----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 736 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~-----~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~ 736 (998)
++.++|.+.+.||+|+||.||++.. ..++..+|+|.+... .......+.+|+.++++++|+||+++++++..
T Consensus 2 ~~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 78 (288)
T cd05093 2 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQHEHIVKFYGVCVE 78 (288)
T ss_pred CchHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec
Confidence 4457899999999999999999985 234677999988643 33455678899999999999999999999999
Q ss_pred CCeEEEEEecCCCCchhHHHhhCC-----------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCc
Q 001902 737 KTHVCLITDYCPGGELFLLLDRQP-----------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 805 (998)
Q Consensus 737 ~~~~~lV~E~~~ggsL~~~l~~~~-----------~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~ 805 (998)
.+.+++||||+++++|.+++.... ...+++..+..++.||+.||+|||++|++||||||+|||++.++.
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~ 158 (288)
T cd05093 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLL 158 (288)
T ss_pred CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCc
Confidence 999999999999999999997532 134899999999999999999999999999999999999999999
Q ss_pred EEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHH
Q 001902 806 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 885 (998)
Q Consensus 806 vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~ 885 (998)
++|+|||++........ ........++..|+|||++.+..++.++|||||||++|
T Consensus 159 ~kl~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~ 213 (288)
T cd05093 159 VKIGDFGMSRDVYSTDY-------------------------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLW 213 (288)
T ss_pred EEeccCCccccccCCce-------------------------eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHH
Confidence 99999999854321100 01112334678899999999888999999999999999
Q ss_pred HHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChh
Q 001902 886 EMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 943 (998)
Q Consensus 886 eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 943 (998)
+|++ |.+||...........+..+... +.....+..+.+|+.+||+.||.+|||+.+
T Consensus 214 ~l~t~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ 271 (288)
T cd05093 214 EIFTYGKQPWYQLSNNEVIECITQGRVL-QRPRTCPKEVYDLMLGCWQREPHMRLNIKE 271 (288)
T ss_pred HHHhCCCCCCCCCCHHHHHHHHHcCCcC-CCCCCCCHHHHHHHHHHccCChhhCCCHHH
Confidence 9998 99999988887777777765432 223346789999999999999999999443
No 238
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=4.3e-35 Score=329.70 Aligned_cols=254 Identities=26% Similarity=0.393 Sum_probs=217.9
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
.|...+.||+|+||.||++.+..++..+|+|.+.............+.+|+.+++.++|+|++++++++...+..|+|||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 48899999999999999999988999999999876544444556678899999999999999999999999999999999
Q ss_pred cCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCC
Q 001902 746 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 825 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 825 (998)
|++ ++|.+++... ...+++..+..++.||+.||.|||++||+|+||+|+||+++.++.++|+|||++....
T Consensus 106 ~~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~------- 176 (317)
T cd06635 106 YCL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIAS------- 176 (317)
T ss_pred CCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccC-------
Confidence 996 5777777543 3458999999999999999999999999999999999999999999999999874321
Q ss_pred CcchhhhhcccCCCCcccccccccccccccCCCCcccchhhc---CCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001902 826 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 902 (998)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~ 902 (998)
......|++.|+|||++. ...++.++|||||||++|+|++|..||...+....
T Consensus 177 ------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~ 232 (317)
T cd06635 177 ------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA 232 (317)
T ss_pred ------------------------CcccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH
Confidence 012335888999999984 45678899999999999999999999988877777
Q ss_pred HHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 903 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 903 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
...+.............+..+.+|+.+||+.+|.+||+ +.++++|+|+..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~il~~~~~~~ 282 (317)
T cd06635 233 LYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPT----SEELLKHMFVLR 282 (317)
T ss_pred HHHHHhccCCCCCCccccHHHHHHHHHHccCCcccCcC----HHHHHhChhhhc
Confidence 77777665544444456788999999999999999999 999999999865
No 239
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=6.8e-36 Score=332.30 Aligned_cols=257 Identities=26% Similarity=0.427 Sum_probs=216.6
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.++|++++.||+|+||.||++.+..+++.|++|.+... .......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv 94 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQ---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVV 94 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccc---cchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEE
Confidence 36899999999999999999999888999999998643 223346678899999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
|||+++++|.+++.+. .++...+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 95 ~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~-- 169 (293)
T cd06647 95 MEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-- 169 (293)
T ss_pred EecCCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccc--
Confidence 9999999999998753 47899999999999999999999999999999999999999999999999875432110
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 903 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~ 903 (998)
.......|++.|+|||.+.+..++.++|+|||||++|+|++|..||...+.....
T Consensus 170 -------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~ 224 (293)
T cd06647 170 -------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL 224 (293)
T ss_pred -------------------------cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhe
Confidence 1112346889999999998888899999999999999999999999877654444
Q ss_pred HHHHhC-CCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 904 ANILHK-DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 904 ~~i~~~-~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
..+... ...++.....+..+.+|+.+||..+|.+||+ +.+++.||||+..
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~----~~~il~h~~~~~~ 275 (293)
T cd06647 225 YLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGS----AKELLQHPFLKIA 275 (293)
T ss_pred eehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcC----HHHHhcCHHHhcC
Confidence 333322 2223333345778999999999999999999 9999999999874
No 240
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=7.5e-36 Score=330.70 Aligned_cols=262 Identities=24% Similarity=0.354 Sum_probs=209.5
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCccceeEEEeeCCeEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCL 742 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~l 742 (998)
.++|...+.||+|+||.||++.+..+++.+|+|.+..... ......+.+|+.++.++. |+||+++++++...+..++
T Consensus 3 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~ 80 (288)
T cd06616 3 AEDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD--EKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWI 80 (288)
T ss_pred HHHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccC--hHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEE
Confidence 3578888999999999999999999999999999875432 244567788999999995 9999999999999999999
Q ss_pred EEecCCCCchhHHH---hhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCcEEEecCCcEEEEeccCccccC
Q 001902 743 ITDYCPGGELFLLL---DRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 743 V~E~~~ggsL~~~l---~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 818 (998)
+|||+. ++|.++. .......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++....
T Consensus 81 ~~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 159 (288)
T cd06616 81 CMELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLV 159 (288)
T ss_pred EEeccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence 999994 4555443 223335699999999999999999999975 99999999999999999999999999985422
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC---CCCChhHHHHHHHHHHHHHcCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA---GHTSAVDWWALGILLYEMLYGYTPFR 895 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~---~~~~~sDIwSlG~il~eLltG~~Pf~ 895 (998)
.. .......|++.|+|||++.+. .++.++|||||||++|+|++|+.||.
T Consensus 160 ~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 211 (288)
T cd06616 160 DS----------------------------IAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYP 211 (288)
T ss_pred cC----------------------------CccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCch
Confidence 10 011223588899999999776 68889999999999999999999997
Q ss_pred CCCh-HHHHHHHHhCCCC-CC--CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChh
Q 001902 896 GKTR-QKTFANILHKDLK-FP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 960 (998)
Q Consensus 896 ~~~~-~~~~~~i~~~~~~-~~--~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~ 960 (998)
.... ...+..+.....+ .+ .....+.++.+||.+||..+|.+||| +.++++||||+...+.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~i~~~~~~~~~~~~ 276 (288)
T cd06616 212 KWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPK----YKELLEHPFIKDYEER 276 (288)
T ss_pred hcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcC----HHHHhcChhhhchhhc
Confidence 6542 1222333222211 11 12346889999999999999999999 9999999999875543
No 241
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1.3e-35 Score=328.24 Aligned_cols=257 Identities=29% Similarity=0.460 Sum_probs=211.3
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++.+.||+|+||.||+|.+..+++.|++|.++... ........+.+|+.+++.++|+||+++++++...+..++||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESE-DDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhc-ccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEE
Confidence 36999999999999999999999999999999887542 23334567889999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||++++.+..+..+. ..++...+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++........
T Consensus 80 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~-- 155 (288)
T cd07833 80 EYVERTLLELLEASP--GGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA-- 155 (288)
T ss_pred ecCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc--
Confidence 999887776665443 4489999999999999999999999999999999999999999999999999855331110
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 903 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~ 903 (998)
.......++..|+|||++.+. .++.++||||||+++|+|++|.+||.+......+
T Consensus 156 ------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~ 211 (288)
T cd07833 156 ------------------------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQL 211 (288)
T ss_pred ------------------------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 012235688999999999887 7889999999999999999999999877655444
Q ss_pred HHHHhCC-------------------CCCCC-----------CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCC
Q 001902 904 ANILHKD-------------------LKFPS-----------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 953 (998)
Q Consensus 904 ~~i~~~~-------------------~~~~~-----------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~ 953 (998)
..+.... ..++. ...++.++.+||.+||..+|++||+ +.++++|||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il~~~~ 287 (288)
T cd07833 212 YLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLT----CDELLQHPY 287 (288)
T ss_pred HHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhccc----HHHHhcCCC
Confidence 3332100 00000 1123778999999999999999999 999999999
Q ss_pred c
Q 001902 954 F 954 (998)
Q Consensus 954 f 954 (998)
|
T Consensus 288 f 288 (288)
T cd07833 288 F 288 (288)
T ss_pred C
Confidence 8
No 242
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.4e-35 Score=327.48 Aligned_cols=255 Identities=25% Similarity=0.423 Sum_probs=210.3
Q ss_pred cccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEec
Q 001902 667 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 746 (998)
Q Consensus 667 y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~ 746 (998)
|++++.||.|++|.||+|.+..+|+.||+|++..... .......+.+|+.+++.++|+|++++++++...+..|++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE-DEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccc-cccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEec
Confidence 6788999999999999999999999999999875432 222335677899999999999999999999999999999999
Q ss_pred CCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCC
Q 001902 747 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 826 (998)
Q Consensus 747 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~ 826 (998)
+ +++|.+++.......+++..+..++.||+.||.|||+++++|+||+|+||+++.++.++|+|||++......
T Consensus 80 ~-~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~------ 152 (283)
T cd07835 80 L-DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVP------ 152 (283)
T ss_pred c-CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCC------
Confidence 9 568999987765456899999999999999999999999999999999999999999999999998543211
Q ss_pred cchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001902 827 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 905 (998)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~ 905 (998)
........+++.|+|||++.+. .++.++||||||+++|+|++|.+||...+....+..
T Consensus 153 ---------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~ 211 (283)
T cd07835 153 ---------------------VRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFR 211 (283)
T ss_pred ---------------------ccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 0111223568899999988664 568899999999999999999999988776555444
Q ss_pred HHhCCC------------------CCC---------CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 906 ILHKDL------------------KFP---------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 906 i~~~~~------------------~~~---------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
+..... .++ .....+..+.++|.+||+.+|.+||| +.++++||||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~il~~~~~ 283 (283)
T cd07835 212 IFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRIS----AKAALQHPYF 283 (283)
T ss_pred HHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcC----HHHHhcCCCC
Confidence 433100 000 12345678999999999999999999 9999999998
No 243
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.4e-35 Score=333.36 Aligned_cols=255 Identities=24% Similarity=0.322 Sum_probs=207.4
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCe----EEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 737 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~----~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~ 737 (998)
+...+|++++.||+|+||.||+|.+..++. .||+|.++.. ........+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~ 81 (316)
T cd05108 4 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS 81 (316)
T ss_pred cchhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC
Confidence 345689999999999999999999866655 4899988643 2334456788899999999999999999988764
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
..++|+||+++|+|.+++.... ..++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++...
T Consensus 82 -~~~~v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 82 -TVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (316)
T ss_pred -CceeeeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccc
Confidence 5789999999999999997653 35889999999999999999999999999999999999999999999999999654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 896 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~ 896 (998)
...... .......++..|+|||++.+..++.++|||||||++|+|++ |..||.+
T Consensus 160 ~~~~~~-------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~ 214 (316)
T cd05108 160 GADEKE-------------------------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 214 (316)
T ss_pred cCCCcc-------------------------eeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence 311100 01112234678999999999999999999999999999997 9999988
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHH
Q 001902 897 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 946 (998)
Q Consensus 897 ~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~ 946 (998)
...... ..+......++....++..+.+++.+||..+|.+||++.+++.
T Consensus 215 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~ 263 (316)
T cd05108 215 IPASEI-SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELII 263 (316)
T ss_pred CCHHHH-HHHHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 765544 3445554455555567889999999999999999999554433
No 244
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=2.8e-35 Score=319.15 Aligned_cols=256 Identities=31% Similarity=0.538 Sum_probs=220.8
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
+|.+.+.||.|+||.||++.+..+++.+++|++..... .......+..|+++++.++|+|++++++.+......++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e 79 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM-SEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVME 79 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC-ChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEE
Confidence 48899999999999999999988999999999875432 33455678889999999999999999999999999999999
Q ss_pred cCCCCchhHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 746 YCPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
|+++++|.+++.... ...++...+..++.+|+.||.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-- 157 (258)
T cd08215 80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV-- 157 (258)
T ss_pred ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCc--
Confidence 999999999997643 4669999999999999999999999999999999999999999999999999885432110
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 903 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~ 903 (998)
.......|++.|+|||.+.+..++.++|+||+|+++|+|++|..||...+.....
T Consensus 158 -------------------------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~ 212 (258)
T cd08215 158 -------------------------DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELA 212 (258)
T ss_pred -------------------------ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHH
Confidence 1122346889999999998888999999999999999999999999888777766
Q ss_pred HHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 904 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 904 ~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
..+....... .....+..+.+++.+||..+|++||+ +.++|+||||
T Consensus 213 ~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~Rp~----~~~ll~~~~~ 258 (258)
T cd08215 213 LKILKGQYPP-IPSQYSSELRNLVSSLLQKDPEERPS----IAQILQSPFI 258 (258)
T ss_pred HHHhcCCCCC-CCCCCCHHHHHHHHHHcCCChhhCcC----HHHHhcCCCC
Confidence 6666554322 22356789999999999999999999 9999999997
No 245
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.6e-35 Score=337.00 Aligned_cols=283 Identities=27% Similarity=0.427 Sum_probs=222.7
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC-----
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----- 738 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~----- 738 (998)
.++|++++.||+|+||.||++.+..+|+.||+|.+.... ........+.+|+.+++.++|+||+++++++....
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 467999999999999999999999999999999986532 23334456788999999999999999999987543
Q ss_pred -eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 739 -HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 739 -~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
..|+||||+ +++|.+++.. ..+++..++.++.||+.||.|||+.||+||||||+||+++.++.++|+|||++...
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~ 168 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQT 168 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccccccc
Confidence 468999999 8899888864 35899999999999999999999999999999999999999999999999998542
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 896 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~ 896 (998)
.. ......+++.|+|||.+.+ ..++.++|+|||||++|+|++|..||.+
T Consensus 169 ~~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~ 218 (343)
T cd07880 169 DS------------------------------EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKG 218 (343)
T ss_pred cc------------------------------CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 21 1123357889999999876 4578899999999999999999999988
Q ss_pred CChHHHHHHHHhCCCCCC-----------------------------CCCCCcHHHHHHHHHccccCccCcCCChhcHHH
Q 001902 897 KTRQKTFANILHKDLKFP-----------------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 947 (998)
Q Consensus 897 ~~~~~~~~~i~~~~~~~~-----------------------------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~e 947 (998)
.+....+..+.......+ .....+..+.++|.+||+.||.+||| +.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t----~~~ 294 (343)
T cd07880 219 HDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRIT----AAE 294 (343)
T ss_pred CCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCC----HHH
Confidence 776555554433211100 01245678899999999999999999 999
Q ss_pred HHcCCCccCCChhhhhcCCCCCCCCCCCCCccccccccCCchhHHhhh
Q 001902 948 IKKHPFFKGVNWALVRCMNPPELDAPLFATDTEKEYKVVDPGMQDLQQ 995 (998)
Q Consensus 948 lL~Hp~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 995 (998)
++.||||+...-. ++....|. -..+.+..+..++|.|-
T Consensus 295 ~l~~~~~~~~~~~------~~~~~~~~----~~~~~~~~~~~~~~~~~ 332 (343)
T cd07880 295 ALAHPYFEEFHDP------EDETEAPP----YDDSFDEVDQSLEEWKR 332 (343)
T ss_pred HhcCccHhhhcCc------ccccCCCC----ccccHHhhccchHHHHH
Confidence 9999999975211 11111222 23446666666666654
No 246
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.2e-35 Score=336.95 Aligned_cols=260 Identities=25% Similarity=0.412 Sum_probs=207.9
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC-----C
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-----T 738 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~-----~ 738 (998)
.++|++.+.||+|+||.||++.+..+|+.||+|.+... ........+..|+.+++.++|+||+++++++... .
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 81 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPF--EHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFN 81 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccc--ccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccc
Confidence 36899999999999999999999999999999998642 2233456677899999999999999999887543 4
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccC
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 818 (998)
.+|+||||+. ++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++....
T Consensus 82 ~~~lv~e~~~-~~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 157 (336)
T cd07849 82 DVYIVQELME-TDLYKLIKT---QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIAD 157 (336)
T ss_pred eEEEEehhcc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecc
Confidence 6899999994 588887754 358999999999999999999999999999999999999999999999999985432
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 897 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~~ 897 (998)
.... .........|++.|+|||.+.+ ..++.++|||||||++|+|++|++||.+.
T Consensus 158 ~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~ 213 (336)
T cd07849 158 PEHD------------------------HTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGK 213 (336)
T ss_pred cccc------------------------ccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 1100 0011223568999999998755 56888999999999999999999999876
Q ss_pred ChHHHHHHHHhCC----------------------CCCC-------CCCCCcHHHHHHHHHccccCccCcCCChhcHHHH
Q 001902 898 TRQKTFANILHKD----------------------LKFP-------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 948 (998)
Q Consensus 898 ~~~~~~~~i~~~~----------------------~~~~-------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~el 948 (998)
+.......+.... .+.. .....+.++.+||.+||+.+|.+||| +.++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt----~~e~ 289 (336)
T cd07849 214 DYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRIT----VEEA 289 (336)
T ss_pred CHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcC----HHHH
Confidence 6543333222100 0000 01234678899999999999999999 9999
Q ss_pred HcCCCccCC
Q 001902 949 KKHPFFKGV 957 (998)
Q Consensus 949 L~Hp~f~~~ 957 (998)
++||||+..
T Consensus 290 l~hp~~~~~ 298 (336)
T cd07849 290 LAHPYLEQY 298 (336)
T ss_pred hcCcccccc
Confidence 999999976
No 247
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=2.2e-35 Score=327.13 Aligned_cols=270 Identities=41% Similarity=0.735 Sum_probs=217.7
Q ss_pred CcccccccCCCCceeEEEEEEc---cCCeEEEEEEeecccccC-hhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCeE
Q 001902 666 HFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLN-RNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 740 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~---~~~~~valK~i~~~~~~~-~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~ 740 (998)
+|++.+.||.|++|.||++.+. .+++.||+|++++..... ......+.+|+.++.++ +|+||+++++.+......
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 4788999999999999999864 457899999987543222 23345677899999999 699999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
|+||||+++++|.+++... ..+++..++.++.|++.+|.|||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 158 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAE 158 (288)
T ss_pred EEEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccc
Confidence 9999999999999998764 45899999999999999999999999999999999999999999999999987543211
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCC--CCChhHHHHHHHHHHHHHcCCCCCCCCC
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG--HTSAVDWWALGILLYEMLYGYTPFRGKT 898 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~--~~~~sDIwSlG~il~eLltG~~Pf~~~~ 898 (998)
. ........|+..|+|||.+.+.. .+.++||||||+++|+|++|..||....
T Consensus 159 ~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~ 212 (288)
T cd05583 159 E--------------------------EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDG 212 (288)
T ss_pred c--------------------------ccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCc
Confidence 0 00112346889999999987654 6789999999999999999999996432
Q ss_pred h----HHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhhhcCC
Q 001902 899 R----QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMN 966 (998)
Q Consensus 899 ~----~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~ 966 (998)
. ......+.....+. ....+..+.++|.+||..||++|||+.. +.++|+||||+.++|..+....
T Consensus 213 ~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~R~t~~~-~~~~l~~~~~~~~~~~~~~~~~ 281 (288)
T cd05583 213 EQNSQSEISRRILKSKPPF--PKTMSAEARDFIQKLLEKDPKKRLGANG-ADEIKNHPFFQGIDWDDLAAKR 281 (288)
T ss_pred ccchHHHHHHHHHccCCCC--CcccCHHHHHHHHHHhcCCHhhccCcch-HHHHhcCcccccCCHHHHhhhc
Confidence 2 22233333333332 3346788999999999999999999543 6789999999999998874433
No 248
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=2e-35 Score=327.15 Aligned_cols=260 Identities=28% Similarity=0.451 Sum_probs=221.9
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.+.|++.+.||+|++|.||++.+..++..+++|++..... ....+.+|+.+++.++|+||+++++++...+..|+|
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 93 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVV 93 (286)
T ss_pred cccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEE
Confidence 4579999999999999999999988899999999875422 456778899999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
|||+++++|.+++.... ..++...+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++.......
T Consensus 94 ~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~-- 170 (286)
T cd06614 94 MEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK-- 170 (286)
T ss_pred EeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccch--
Confidence 99999999999998753 369999999999999999999999999999999999999999999999999874432110
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 903 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~ 903 (998)
.......++..|+|||.+.+..++.++|+||||+++|+|++|..||...+.....
T Consensus 171 -------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~ 225 (286)
T cd06614 171 -------------------------SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRAL 225 (286)
T ss_pred -------------------------hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 0112345788999999998888999999999999999999999999887776655
Q ss_pred HHHHhCCCC-CCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCCh
Q 001902 904 ANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 959 (998)
Q Consensus 904 ~~i~~~~~~-~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 959 (998)
..+...... ......++..+.+||.+||+.+|.+||+ +.++++||||+...|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~il~~~~~~~~~~ 278 (286)
T cd06614 226 FLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPS----AEELLQHPFLKKACP 278 (286)
T ss_pred HHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcC----HHHHhhChHhhccCc
Confidence 555543332 2222336788999999999999999999 999999999999544
No 249
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.9e-35 Score=325.59 Aligned_cols=258 Identities=17% Similarity=0.231 Sum_probs=209.3
Q ss_pred cccCCcccccccCCCCceeEEEEEEcc-----CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEee
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 736 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~-----~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~ 736 (998)
+..++|++.+.||+|+||.||++.+.. ++..||+|.+.... .......+.+|+.+++.++|+||+++++++..
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~ 80 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 80 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence 345689999999999999999998742 35789999886432 22334567889999999999999999999999
Q ss_pred CCeEEEEEecCCCCchhHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEE
Q 001902 737 KTHVCLITDYCPGGELFLLLDRQP--------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSL 808 (998)
Q Consensus 737 ~~~~~lV~E~~~ggsL~~~l~~~~--------~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL 808 (998)
....++||||+++++|.+++.... ...++...+..++.|++.||.|||+.|++|+||||+||+++.++.++|
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 81 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEE
Confidence 999999999999999999987532 123577889999999999999999999999999999999999999999
Q ss_pred EeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHH
Q 001902 809 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML 888 (998)
Q Consensus 809 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLl 888 (998)
+|||++........ ........+++.|+|||++.+..++.++|||||||++|+|+
T Consensus 161 ~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~ 215 (277)
T cd05062 161 GDFGMTRDIYETDY-------------------------YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 215 (277)
T ss_pred CCCCCccccCCcce-------------------------eecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHH
Confidence 99999854321100 00111234678899999999888999999999999999999
Q ss_pred c-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 889 Y-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 889 t-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
+ |..||.+.+.......+...... +.....+..+.+|+.+||+.||.+||+ +.+++++
T Consensus 216 ~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps----~~e~l~~ 274 (277)
T cd05062 216 TLAEQPYQGMSNEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPS----FLEIISS 274 (277)
T ss_pred cCCCCCCCCCCHHHHHHHHHcCCcC-CCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHHH
Confidence 8 79999988877777666655432 223446788999999999999999999 6666643
No 250
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.5e-35 Score=332.60 Aligned_cols=260 Identities=27% Similarity=0.441 Sum_probs=205.7
Q ss_pred CcccccccCCCCceeEEEEEEcc--CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC--CeEE
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCG--SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THVC 741 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~--~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~~~~ 741 (998)
+|.+.+.||+|+||.||+|.+.. +++.||+|.+.............+.+|+.+++.++||||+++++++... ..+|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 48899999999999999999988 8999999999875333333446677899999999999999999999988 8899
Q ss_pred EEEecCCCCchhHHHhhC---CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec----CCcEEEEeccCc
Q 001902 742 LITDYCPGGELFLLLDRQ---PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG----NGHVSLTDFDLS 814 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~---~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~----~g~vkL~DFG~a 814 (998)
+||||++ ++|.+++... ....+++..++.++.||+.||.|||+++|+||||||+|||++. ++.+||+|||++
T Consensus 81 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 81 LLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 9999995 5676666432 2236899999999999999999999999999999999999999 899999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCC
Q 001902 815 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTP 893 (998)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~P 893 (998)
......... ........+++.|+|||++.+. .++.++|||||||++|+|++|.+|
T Consensus 160 ~~~~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~ 215 (316)
T cd07842 160 RLFNAPLKP------------------------LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPI 215 (316)
T ss_pred cccCCCccc------------------------ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCC
Confidence 654311100 0112345689999999998764 578899999999999999999999
Q ss_pred CCCCChHH---------HHHHHHh--------------------------CCCCCCC---------CCCCcHHHHHHHHH
Q 001902 894 FRGKTRQK---------TFANILH--------------------------KDLKFPS---------STPTSLHAKQLMYR 929 (998)
Q Consensus 894 f~~~~~~~---------~~~~i~~--------------------------~~~~~~~---------~~~~s~~l~~Ll~~ 929 (998)
|.+..... .+..++. ....++. ....+..+.+++.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 295 (316)
T cd07842 216 FKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRK 295 (316)
T ss_pred CcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHH
Confidence 97654321 1111111 0001110 01456678999999
Q ss_pred ccccCccCcCCChhcHHHHHcCCCc
Q 001902 930 LLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 930 ~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
||..||.+||| +.++++||||
T Consensus 296 ~l~~~P~~Rps----~~eil~~~~f 316 (316)
T cd07842 296 LLEYDPTKRIT----AEEALEHPYF 316 (316)
T ss_pred HhcCCcccCcC----HHHHhcCCCC
Confidence 99999999999 9999999998
No 251
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.9e-35 Score=326.59 Aligned_cols=255 Identities=24% Similarity=0.425 Sum_probs=209.4
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
+|++++.||.|++|.||+|.+..+|..||+|++..... ......+.+|+.+++.++|+||+++++++...+..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE--EGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFE 78 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc--ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEe
Confidence 48899999999999999999999999999999876432 2233556789999999999999999999999999999999
Q ss_pred cCCCCchhHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 746 YCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~-~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
|++ ++|.+++.... ...+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 79 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~---- 153 (284)
T cd07836 79 YMD-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIP---- 153 (284)
T ss_pred cCC-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCC----
Confidence 996 48888876542 245899999999999999999999999999999999999999999999999988543211
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 903 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~ 903 (998)
........++..|++||++.+. .++.++|||||||++|+|++|..||.+.+..+.+
T Consensus 154 -----------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~ 210 (284)
T cd07836 154 -----------------------VNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQL 210 (284)
T ss_pred -----------------------ccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHH
Confidence 0111233578899999998664 5688999999999999999999999988766655
Q ss_pred HHHHhCC------------------CCCCC---------CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 904 ANILHKD------------------LKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 904 ~~i~~~~------------------~~~~~---------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
..+.... ..++. ....+..+.++|.+||+.||.+||+ +.++++||||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~----~~~~l~~~~f 284 (284)
T cd07836 211 LKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRIS----AHDALQHPWF 284 (284)
T ss_pred HHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCC----HHHHhcCCCC
Confidence 5543210 00000 0134678899999999999999999 9999999998
No 252
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=2.1e-35 Score=327.73 Aligned_cols=255 Identities=27% Similarity=0.396 Sum_probs=203.3
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
.+|++++.||+|+||.||+|.+..+|+.||+|++..... ......+.+|+.+++.++|+||+++++++...+..|+||
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE--EGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc--CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 579999999999999999999999999999999875422 222335678999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||+. ++|.+++.... ..++...++.++.||+.||.|||+.||+|+||||+|||++.++.++|+|||++.......
T Consensus 83 e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~--- 157 (291)
T cd07870 83 EYMH-TDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPS--- 157 (291)
T ss_pred eccc-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCC---
Confidence 9995 67776665442 347888899999999999999999999999999999999999999999999885422110
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCCCCCCChH-HH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQ-KT 902 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~-~~ 902 (998)
.......+++.|+|||.+.+. .++.++|||||||++|+|++|..||.+.+.. +.
T Consensus 158 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~ 213 (291)
T cd07870 158 ------------------------QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQ 213 (291)
T ss_pred ------------------------CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHH
Confidence 011223578999999998764 5788999999999999999999999865532 22
Q ss_pred HHHHHhC-C----------------------CCCC-------CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCC
Q 001902 903 FANILHK-D----------------------LKFP-------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHP 952 (998)
Q Consensus 903 ~~~i~~~-~----------------------~~~~-------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp 952 (998)
+..+... . ...+ .....+..+.+|+.+||..||.+||| +.+++.||
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t----~~~~l~h~ 289 (291)
T cd07870 214 LEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRIS----AQDALLHP 289 (291)
T ss_pred HHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcC----HHHHhcCC
Confidence 2222110 0 0000 00123567889999999999999999 99999999
Q ss_pred Cc
Q 001902 953 FF 954 (998)
Q Consensus 953 ~f 954 (998)
||
T Consensus 290 ~~ 291 (291)
T cd07870 290 YF 291 (291)
T ss_pred CC
Confidence 98
No 253
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=2.9e-35 Score=321.11 Aligned_cols=250 Identities=25% Similarity=0.344 Sum_probs=208.8
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEE
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 741 (998)
+..++|++.+.||+|++|.||+|.+. +++.||+|.++.... ....+.+|+.++++++|+||+++++++...+.+|
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 77 (261)
T cd05068 3 IDRTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM----DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIY 77 (261)
T ss_pred cchhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc----cHHHHHHHHHHHHHCCCCCccceeEEEecCCCee
Confidence 44568999999999999999999974 467899999875422 2356778999999999999999999999999999
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 821 (998)
+||||+++++|.+++.......++...+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 78 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 157 (261)
T cd05068 78 IVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDI 157 (261)
T ss_pred eeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCc
Confidence 99999999999999977655568999999999999999999999999999999999999999999999999986543110
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCChH
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 900 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~ 900 (998)
. .......++..|+|||++.+..++.++|||||||++|+|++ |+.||.+.+..
T Consensus 158 ~--------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~ 211 (261)
T cd05068 158 Y--------------------------EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA 211 (261)
T ss_pred c--------------------------cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 0 00111223468999999998889999999999999999998 99999988777
Q ss_pred HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChh
Q 001902 901 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 943 (998)
Q Consensus 901 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 943 (998)
..+..+... ...+.....+..+.+++.+||+.+|.+||++.+
T Consensus 212 ~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~ 253 (261)
T cd05068 212 EVLQQVDQG-YRMPCPPGCPKELYDIMLDCWKEDPDDRPTFET 253 (261)
T ss_pred HHHHHHHcC-CCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHH
Confidence 666665443 333444557889999999999999999999433
No 254
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=2.5e-35 Score=324.87 Aligned_cols=255 Identities=28% Similarity=0.419 Sum_probs=216.2
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
-|++++.||.|+||.||++.+..++..+|+|++.... .......+.+|+.+++.++||||+++++++..++..|+|||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 82 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 82 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEE
Confidence 4788899999999999999998899999999886432 23345678889999999999999999999999999999999
Q ss_pred cCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCC
Q 001902 746 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 825 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 825 (998)
|+++++|.+++.. ..++...+..++.|++.+|.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 83 ~~~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~---- 155 (277)
T cd06641 83 YLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ---- 155 (277)
T ss_pred eCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccch----
Confidence 9999999999865 348999999999999999999999999999999999999999999999999885432110
Q ss_pred CcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001902 826 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 905 (998)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~ 905 (998)
.......|+..|+|||.+.+..++.++|+|||||++|+|++|..||...........
T Consensus 156 -----------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~ 212 (277)
T cd06641 156 -----------------------IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFL 212 (277)
T ss_pred -----------------------hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHH
Confidence 011234688899999999888889999999999999999999999988776655555
Q ss_pred HHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 906 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 906 i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
+.....+ ......+..+.+++.+||..+|.+||+ +.++++||||...
T Consensus 213 ~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~Rp~----~~~~l~~~~~~~~ 259 (277)
T cd06641 213 IPKNNPP-TLEGNYSKPLKEFVEACLNKEPSFRPT----AKELLKHKFIVRF 259 (277)
T ss_pred HhcCCCC-CCCcccCHHHHHHHHHHccCChhhCcC----HHHHHhCHHHhhh
Confidence 5433222 122346788999999999999999999 9999999999874
No 255
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3.4e-35 Score=325.89 Aligned_cols=267 Identities=44% Similarity=0.773 Sum_probs=216.7
Q ss_pred CcccccccCCCCceeEEEEEEc---cCCeEEEEEEeecccccC-hhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCeE
Q 001902 666 HFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLN-RNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 740 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~---~~~~~valK~i~~~~~~~-~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~ 740 (998)
.|++.+.||.|+||.||+|.+. .+|+.||+|++....... ......+.+|+.+++.+ +|+||+.+++++..+..+
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 4888999999999999999985 478999999987643322 23345677899999999 699999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
|+||||+++++|.+++... ..+++..+..++.||+.||.|||+.|++||||+|+|||++.++.++|+|||++......
T Consensus 81 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 158 (290)
T cd05613 81 HLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHED 158 (290)
T ss_pred EEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccc
Confidence 9999999999999999764 45889999999999999999999999999999999999999999999999988543211
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC--CCCChhHHHHHHHHHHHHHcCCCCCCCCC
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA--GHTSAVDWWALGILLYEMLYGYTPFRGKT 898 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~--~~~~~sDIwSlG~il~eLltG~~Pf~~~~ 898 (998)
. ........|+..|+|||.+.+. .++.++||||||+++|+|++|..||....
T Consensus 159 ~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~ 212 (290)
T cd05613 159 E--------------------------VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDG 212 (290)
T ss_pred c--------------------------ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCC
Confidence 0 0111234689999999998653 46789999999999999999999997533
Q ss_pred h----HHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCCh-hcHHHHHcCCCccCCChhhh
Q 001902 899 R----QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALV 962 (998)
Q Consensus 899 ~----~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~ 962 (998)
. ......+.....+++ ...+..+.+|+.+||..||.+||+.. ..+.+++.||||+.++|..+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~~ 279 (290)
T cd05613 213 EKNSQAEISRRILKSEPPYP--QEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKINWDDL 279 (290)
T ss_pred ccccHHHHHHHhhccCCCCC--ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCCHHHH
Confidence 2 233333333333333 34678899999999999999998432 34999999999999999765
No 256
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=3.2e-35 Score=324.22 Aligned_cols=251 Identities=26% Similarity=0.456 Sum_probs=203.4
Q ss_pred cccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeC--CeEEEE
Q 001902 667 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK--THVCLI 743 (998)
Q Consensus 667 y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~--~~~~lV 743 (998)
|++++.||+|+||.||++.+..+++.||+|.++.... .... .....|+.++.++ +|+||+++++++.+. +.+++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~~-~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFK-SLEQ-VNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccC-Cchh-hhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 6788999999999999999999999999999876422 2222 2345688888888 499999999999887 899999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
|||++ ++|.+.+.... ..+++..++.++.||+.||.|||++||+||||+|+||+++. +.+||+|||++......
T Consensus 79 ~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~--- 152 (282)
T cd07831 79 FELMD-MNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSK--- 152 (282)
T ss_pred EecCC-ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccC---
Confidence 99996 57877776542 45899999999999999999999999999999999999999 99999999998543211
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 902 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~ 902 (998)
.......++..|+|||++.. ..++.++|||||||++|+|++|.+||.+.+..+.
T Consensus 153 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~ 207 (282)
T cd07831 153 -------------------------PPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQ 207 (282)
T ss_pred -------------------------CCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHH
Confidence 01122457889999998754 4568899999999999999999999988776655
Q ss_pred HHHHHhC------------------CCCCCC---------CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 903 FANILHK------------------DLKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 903 ~~~i~~~------------------~~~~~~---------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
+..+... ...++. ....+..+.+||.+||..+|.+||+ +.++++||||
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~----~~~~l~~~~~ 282 (282)
T cd07831 208 IAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERIT----AKQALRHPYF 282 (282)
T ss_pred HHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccC----HHHHhhCCCC
Confidence 5444321 111111 1235788999999999999999999 9999999998
No 257
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=2.4e-35 Score=329.87 Aligned_cols=261 Identities=25% Similarity=0.357 Sum_probs=205.9
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC------
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 737 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------ 737 (998)
.++|++++.||+|+||.||+|.+..+++.||+|.+..... .........+|+.++++++||||+++++++...
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCC-cCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 4589999999999999999999999999999999875422 122233456799999999999999999988654
Q ss_pred --CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcc
Q 001902 738 --THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 815 (998)
Q Consensus 738 --~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~ 815 (998)
...++||||+ +++|.+++.... ..+++..++.++.||+.||.|||++|++|+||||+||+++.++.+||+|||++.
T Consensus 90 ~~~~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 167 (310)
T cd07865 90 YKGSFYLVFEFC-EHDLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLAR 167 (310)
T ss_pred CCceEEEEEcCC-CcCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcc
Confidence 3569999999 458888876542 358999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCCC
Q 001902 816 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPF 894 (998)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf 894 (998)
........ .........++..|+|||.+.+. .++.++||||||+++|+|++|.+||
T Consensus 168 ~~~~~~~~-----------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~ 224 (310)
T cd07865 168 AFSLSKNS-----------------------KPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIM 224 (310)
T ss_pred cccCCccc-----------------------CCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCC
Confidence 54311110 00112234678999999998764 4688999999999999999999999
Q ss_pred CCCChHHHHHHHHhC--CC-----------------CCCC-----------CCCCcHHHHHHHHHccccCccCcCCChhc
Q 001902 895 RGKTRQKTFANILHK--DL-----------------KFPS-----------STPTSLHAKQLMYRLLHRDPKSRLGSHEG 944 (998)
Q Consensus 895 ~~~~~~~~~~~i~~~--~~-----------------~~~~-----------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 944 (998)
.+.+.......+... .+ .++. ....+..+.+||.+||..||.+|||
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t---- 300 (310)
T cd07865 225 QGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRID---- 300 (310)
T ss_pred CCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccC----
Confidence 887765444333221 00 0110 0112456789999999999999999
Q ss_pred HHHHHcCCCc
Q 001902 945 ANEIKKHPFF 954 (998)
Q Consensus 945 a~elL~Hp~f 954 (998)
+.++|+||||
T Consensus 301 ~~e~l~h~~f 310 (310)
T cd07865 301 ADTALNHDFF 310 (310)
T ss_pred HHHHhcCCCC
Confidence 9999999998
No 258
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=3e-35 Score=328.59 Aligned_cols=256 Identities=22% Similarity=0.319 Sum_probs=210.8
Q ss_pred cccCCcccccccCCCCceeEEEEEEc-----cCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEe
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQ 735 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~-----~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~ 735 (998)
+..++|.+.+.||+|+||.||++.+. .++..+|+|+++... .......+.+|+.+++++ +|+||+++++++.
T Consensus 32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 109 (302)
T cd05055 32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA--HSSEREALMSELKIMSHLGNHENIVNLLGACT 109 (302)
T ss_pred ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC--ChHHHHHHHHHHHHHHhccCCCCcceEEEEEe
Confidence 44568999999999999999999862 346689999887542 233456788999999999 7999999999999
Q ss_pred eCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcc
Q 001902 736 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 815 (998)
Q Consensus 736 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~ 815 (998)
..+.+|+||||+++++|.+++.......+++..+..++.||+.||.|||+++|+|+||||+|||++.++.++|+|||++.
T Consensus 110 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~ 189 (302)
T cd05055 110 IGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLAR 189 (302)
T ss_pred cCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccc
Confidence 99999999999999999999976544458999999999999999999999999999999999999999999999999985
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCC
Q 001902 816 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPF 894 (998)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf 894 (998)
....... ........++..|+|||++.+..++.++|||||||++|+|++ |..||
T Consensus 190 ~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~ 244 (302)
T cd05055 190 DIMNDSN-------------------------YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPY 244 (302)
T ss_pred cccCCCc-------------------------eeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCc
Confidence 4321100 001123346789999999999999999999999999999998 99999
Q ss_pred CCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhc
Q 001902 895 RGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 944 (998)
Q Consensus 895 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 944 (998)
........+..........+.....+..+.+|+.+||..+|++||++.++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~el 294 (302)
T cd05055 245 PGMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQI 294 (302)
T ss_pred CCCCchHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHH
Confidence 88776655555555444444444567899999999999999999994443
No 259
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=9.4e-36 Score=337.61 Aligned_cols=267 Identities=25% Similarity=0.401 Sum_probs=213.9
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEe----eCCeE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ----TKTHV 740 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~----~~~~~ 740 (998)
++|++.+.||.|+||.||+|.+..+|+.||+|++..... .......+.+|+.+++.++||||+++++++. ....+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD-VPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc-cccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 679999999999999999999999999999999875422 2234566778999999999999999999875 33578
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
|+||||+ +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++.+|.+||+|||++......
T Consensus 84 ~lv~e~~-~~~l~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 160 (334)
T cd07855 84 YVVMDLM-ESDLHHIIHSD--QPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSS 160 (334)
T ss_pred EEEEehh-hhhHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeeccc
Confidence 9999999 56898888654 44999999999999999999999999999999999999999999999999998553211
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCCCCh
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 899 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~ 899 (998)
... .........|+..|+|||.+.+ ..++.++|||||||++|+|++|++||.+.+.
T Consensus 161 ~~~-----------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~ 217 (334)
T cd07855 161 PTE-----------------------HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNY 217 (334)
T ss_pred CcC-----------------------CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCCh
Confidence 100 0111223478999999999866 4578899999999999999999999988765
Q ss_pred HHHHHHHHhCCC--------------------CCCC---------CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 900 QKTFANILHKDL--------------------KFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 900 ~~~~~~i~~~~~--------------------~~~~---------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
...+..+..... .++. ....+.++.++|.+||+.+|.+||+ +.+++.
T Consensus 218 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~~l~ 293 (334)
T cd07855 218 VHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERIT----VEQALQ 293 (334)
T ss_pred HHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcC----HHHHHh
Confidence 444333222100 0000 1235788999999999999999999 999999
Q ss_pred CCCccCCChhhh
Q 001902 951 HPFFKGVNWALV 962 (998)
Q Consensus 951 Hp~f~~~~~~~~ 962 (998)
||||.+......
T Consensus 294 ~~~~~~~~~~~~ 305 (334)
T cd07855 294 HPFLAQYHDPDD 305 (334)
T ss_pred ChhhhhccCCcc
Confidence 999997655444
No 260
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.9e-35 Score=325.21 Aligned_cols=257 Identities=22% Similarity=0.348 Sum_probs=209.2
Q ss_pred ccCCcccccccCCCCceeEEEEEEc----cCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELC----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 738 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~----~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 738 (998)
..++|++.+.||+|+||.||+|.+. .++..+++|.+... ........+.+|+.+++.++||||+++++++...+
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 80 (283)
T cd05090 3 PLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDI--NNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQ 80 (283)
T ss_pred ChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCC--CCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCC
Confidence 3568999999999999999999863 45678999998743 23344567888999999999999999999999999
Q ss_pred eEEEEEecCCCCchhHHHhhCC---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecC
Q 001902 739 HVCLITDYCPGGELFLLLDRQP---------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN 803 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~---------------~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~ 803 (998)
..|+||||+++++|.+++.... ...+++..+..++.||+.||.|||++||+|+||||+|||++.+
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~ 160 (283)
T cd05090 81 PVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQ 160 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCC
Confidence 9999999999999999985321 1247888999999999999999999999999999999999999
Q ss_pred CcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHH
Q 001902 804 GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGIL 883 (998)
Q Consensus 804 g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~i 883 (998)
+.+||+|||++........ ........++..|+|||++.+..++.++|||||||+
T Consensus 161 ~~~kl~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i 215 (283)
T cd05090 161 LHVKISDLGLSREIYSADY-------------------------YRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVV 215 (283)
T ss_pred CcEEeccccccccccCCcc-------------------------eecccCCCccceecChHHhccCCCCchhhhHHHHHH
Confidence 9999999999855321100 001123345778999999988889999999999999
Q ss_pred HHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 884 LYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 884 l~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
+|+|++ |..||.+.........+.... ..+....++..+.+++.+||+.||.+||+ +.+|+++
T Consensus 216 l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rp~----~~~i~~~ 279 (283)
T cd05090 216 LWEIFSFGLQPYYGFSNQEVIEMVRKRQ-LLPCSEDCPPRMYSLMTECWQEGPSRRPR----FKDIHTR 279 (283)
T ss_pred HHHHHcCCCCCCCCCCHHHHHHHHHcCC-cCCCCCCCCHHHHHHHHHHcccCcccCcC----HHHHHHH
Confidence 999998 999998877655555544433 33444457889999999999999999999 5555543
No 261
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=5.4e-35 Score=319.71 Aligned_cols=259 Identities=25% Similarity=0.364 Sum_probs=214.5
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeeccc--ccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC--CeE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--MLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THV 740 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~--~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~~~ 740 (998)
.+|++.+.||+|+||.||++.+..+++.||+|.+.... .........+.+|+.+++.++|+||+++++++... ..+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 36999999999999999999999999999999875432 12234556788999999999999999999998653 568
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
+++|||+++++|.+++... ..+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 82 ~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 159 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAY--GALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTI 159 (264)
T ss_pred EEEEEeCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccc
Confidence 9999999999999998764 34889999999999999999999999999999999999999999999999998543210
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChH
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 900 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~ 900 (998)
. ..........|+..|+|||++.+..++.++|+|||||++|+|++|..||......
T Consensus 160 ~------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~ 215 (264)
T cd06653 160 C------------------------MSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM 215 (264)
T ss_pred c------------------------ccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH
Confidence 0 0001112356899999999999888899999999999999999999999887766
Q ss_pred HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 901 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 901 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
....++.............+..+.++|.+||. +|..||+ +.+++.|||.
T Consensus 216 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~----~~~~~~~~~~ 264 (264)
T cd06653 216 AAIFKIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPT----AEFLLRHPFV 264 (264)
T ss_pred HHHHHHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCcc----HHHHhcCCCC
Confidence 66665554333322334567889999999999 5799999 9999999984
No 262
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=2.7e-35 Score=324.10 Aligned_cols=258 Identities=19% Similarity=0.248 Sum_probs=211.4
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccC-----CeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEe
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 735 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~-----~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~ 735 (998)
.+..++|.+.+.||+|+||.||++.+... +..||+|.+.... .......+.+|+.+++.++|+||+++++++.
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~ 79 (277)
T cd05032 2 ELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVS 79 (277)
T ss_pred ccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEc
Confidence 35567899999999999999999998643 4889999986442 2334456788999999999999999999999
Q ss_pred eCCeEEEEEecCCCCchhHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEE
Q 001902 736 TKTHVCLITDYCPGGELFLLLDRQP--------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 807 (998)
Q Consensus 736 ~~~~~~lV~E~~~ggsL~~~l~~~~--------~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vk 807 (998)
.....++||||+++++|.+++.... ...+++..+..++.||+.||.|||+++|+|+||||+|||++.++.+|
T Consensus 80 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~k 159 (277)
T cd05032 80 TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVK 159 (277)
T ss_pred CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEE
Confidence 9999999999999999999987532 22467889999999999999999999999999999999999999999
Q ss_pred EEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHH
Q 001902 808 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 887 (998)
Q Consensus 808 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eL 887 (998)
|+|||++........ ........++..|+|||.+.+..++.++|||||||++|+|
T Consensus 160 l~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el 214 (277)
T cd05032 160 IGDFGMTRDIYETDY-------------------------YRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEM 214 (277)
T ss_pred ECCcccchhhccCcc-------------------------cccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHh
Confidence 999999854321100 0111233567899999999888899999999999999999
Q ss_pred Hc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 888 LY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 888 lt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
++ |..||.+.+.......+.... ..+.....+..+.+|+.+||+.+|++||| +.+++.
T Consensus 215 ~t~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~l~~ 273 (277)
T cd05032 215 ATLAEQPYQGLSNEEVLKFVIDGG-HLDLPENCPDKLLELMRMCWQYNPKMRPT----FLEIVS 273 (277)
T ss_pred hccCCCCCccCCHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHcCCChhhCCC----HHHHHH
Confidence 98 999998888777666665432 22333446889999999999999999999 555543
No 263
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=3.7e-35 Score=320.74 Aligned_cols=249 Identities=23% Similarity=0.351 Sum_probs=205.6
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEE
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 741 (998)
+..++|++.+.||+|+||.||+|.+..+ ..+|+|+++.... ....+.+|+.+++.++|+||+++++.+. ....|
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~ 76 (262)
T cd05071 3 IPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIY 76 (262)
T ss_pred CChHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc----CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcE
Confidence 4456899999999999999999998655 4699999875322 2346788999999999999999998875 45689
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 821 (998)
+||||+++++|.+++.......++...+..++.|++.||+|||+++|+|+||||+||+++.++.++|+|||.+.......
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~ 156 (262)
T cd05071 77 IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 156 (262)
T ss_pred EEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeeccccc
Confidence 99999999999999987555568999999999999999999999999999999999999999999999999985432110
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCChH
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 900 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~ 900 (998)
........++..|+|||++.+..++.++|||||||++|+|++ |..||.+....
T Consensus 157 --------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~ 210 (262)
T cd05071 157 --------------------------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR 210 (262)
T ss_pred --------------------------cccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH
Confidence 001122346778999999988889999999999999999999 89999888777
Q ss_pred HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChh
Q 001902 901 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 943 (998)
Q Consensus 901 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 943 (998)
..+..+... ...+.....+..+.+|+.+||+.||.+||++.+
T Consensus 211 ~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~ 252 (262)
T cd05071 211 EVLDQVERG-YRMPCPPECPESLHDLMCQCWRKEPEERPTFEY 252 (262)
T ss_pred HHHHHHhcC-CCCCCccccCHHHHHHHHHHccCCcccCCCHHH
Confidence 666665443 233444567888999999999999999999443
No 264
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1.7e-35 Score=334.71 Aligned_cols=262 Identities=23% Similarity=0.320 Sum_probs=207.1
Q ss_pred cccCCC--CceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEecCC
Q 001902 671 KPLGSG--DTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCP 748 (998)
Q Consensus 671 ~~LG~G--~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ 748 (998)
..||.| +||+||++.+..+|+.||+|++..... .....+.+.+|+.+++.++||||++++++|...+..|+||||+.
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~ 82 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENC-TEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA 82 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence 456666 999999999999999999999875432 23345778889999999999999999999999999999999999
Q ss_pred CCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcc
Q 001902 749 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 828 (998)
Q Consensus 749 ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 828 (998)
+++|.+++.+.....+++..++.++.||+.||+|||++||+||||||+|||++.++.++++||+.+.........
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~----- 157 (328)
T cd08226 83 YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQK----- 157 (328)
T ss_pred CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcc-----
Confidence 999999998754456899999999999999999999999999999999999999999999999865322100000
Q ss_pred hhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC--CCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHH
Q 001902 829 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA--GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 906 (998)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~--~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i 906 (998)
... .........++..|+|||++.+. .++.++|||||||++|+|++|..||.+......+...
T Consensus 158 -----------~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~ 222 (328)
T cd08226 158 -----------AKV----VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQK 222 (328)
T ss_pred -----------ccc----cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHH
Confidence 000 00001112356779999999764 4788999999999999999999999887665554443
Q ss_pred HhCCCC---------------------------------------------CCCCCCCcHHHHHHHHHccccCccCcCCC
Q 001902 907 LHKDLK---------------------------------------------FPSSTPTSLHAKQLMYRLLHRDPKSRLGS 941 (998)
Q Consensus 907 ~~~~~~---------------------------------------------~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~ 941 (998)
...... .+.....+..+.+||.+||+.||++|||
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt- 301 (328)
T cd08226 223 LKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPS- 301 (328)
T ss_pred hcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCC-
Confidence 332111 1111234567899999999999999999
Q ss_pred hhcHHHHHcCCCccCC
Q 001902 942 HEGANEIKKHPFFKGV 957 (998)
Q Consensus 942 ~~~a~elL~Hp~f~~~ 957 (998)
+.++|+||||+.+
T Consensus 302 ---a~e~l~~~~~~~~ 314 (328)
T cd08226 302 ---ASSLLSHAFFKQV 314 (328)
T ss_pred ---HHHHhhCHHHHHH
Confidence 9999999999875
No 265
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=4.8e-35 Score=320.70 Aligned_cols=255 Identities=25% Similarity=0.382 Sum_probs=204.7
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
+.+.....||+|+||.||++.+..++..|++|.+... .......+.+|+.+++.++|+||+++++++...+..++||
T Consensus 8 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 84 (268)
T cd06624 8 DENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPER---DSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFM 84 (268)
T ss_pred ccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCC---CHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEE
Confidence 3444456799999999999999889999999988754 2334567889999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCC--CHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec-CCcEEEEeccCccccCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVL--KEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l--~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~-~g~vkL~DFG~a~~~~~~~ 821 (998)
||+++++|.+++.... ..+ +...+..++.||+.||.|||++||+||||||+||+++. ++.++|+|||.+.......
T Consensus 85 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~ 163 (268)
T cd06624 85 EQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGIN 163 (268)
T ss_pred ecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCC
Confidence 9999999999997642 234 88889999999999999999999999999999999986 6799999999885432100
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCC--CCChhHHHHHHHHHHHHHcCCCCCCCCCh
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG--HTSAVDWWALGILLYEMLYGYTPFRGKTR 899 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~--~~~~sDIwSlG~il~eLltG~~Pf~~~~~ 899 (998)
.......|++.|+|||++.+.. ++.++||||||+++|+|++|..||.....
T Consensus 164 ---------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~ 216 (268)
T cd06624 164 ---------------------------PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGE 216 (268)
T ss_pred ---------------------------CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccC
Confidence 0112235789999999986643 78899999999999999999999976543
Q ss_pred HHH-HHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 900 QKT-FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 900 ~~~-~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
... .................+.++.+|+.+||..+|.+||| +.+++.||||
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~ll~~~~~ 268 (268)
T cd06624 217 PQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRAS----AHDLLQDPFL 268 (268)
T ss_pred hhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCC----HHHHHhCCCC
Confidence 222 11111111111122346788999999999999999999 9999999997
No 266
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=3.7e-35 Score=317.58 Aligned_cols=250 Identities=48% Similarity=0.864 Sum_probs=217.2
Q ss_pred cCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEecCCCCch
Q 001902 673 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 752 (998)
Q Consensus 673 LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ggsL 752 (998)
||.|+||.||++.+..+++.+++|++.+...........+..|+.+++.++|+||+++++.+..+..+|+||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 69999999999999888999999999877655555677888999999999999999999999999999999999999999
Q ss_pred hHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcchhhh
Q 001902 753 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 832 (998)
Q Consensus 753 ~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 832 (998)
.+++... ..+++..+..++.||+.||.|||+.+++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~----------- 147 (250)
T cd05123 81 FSHLSKE--GRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG----------- 147 (250)
T ss_pred HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCC-----------
Confidence 9999775 358999999999999999999999999999999999999999999999999885432110
Q ss_pred hcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCC
Q 001902 833 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLK 912 (998)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~~~~~ 912 (998)
.......++..|+|||.+.+...+.++|+||||+++|+|++|..||...+.......+......
T Consensus 148 ----------------~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 211 (250)
T cd05123 148 ----------------SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLR 211 (250)
T ss_pred ----------------CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCC
Confidence 1123456889999999998888899999999999999999999999888776666776665444
Q ss_pred CCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 913 FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 913 ~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
++. ..+..+.+||.+||..||++||++.. +.++++||||
T Consensus 212 ~~~--~~~~~l~~~i~~~l~~~p~~R~~~~~-~~~l~~~~~f 250 (250)
T cd05123 212 FPE--FLSPEARDLISGLLQKDPTKRLGSGG-AEEIKAHPFF 250 (250)
T ss_pred CCC--CCCHHHHHHHHHHhcCCHhhCCCccc-HHHHHhCCCC
Confidence 443 35788999999999999999999433 4999999998
No 267
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.6e-35 Score=336.20 Aligned_cols=261 Identities=26% Similarity=0.414 Sum_probs=211.0
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC-----Ce
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-----TH 739 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~-----~~ 739 (998)
.+|++.+.||.|+||.||++.+..+++.||+|.+..... .......+..|+.+++.++|+||+++++++... ..
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFD-NRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccc-ccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 579999999999999999999999999999999875422 333345677899999999999999999987644 35
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCC
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 819 (998)
+|+||||+ +++|.+++... ..+++..+..++.||+.||.|||+++++|+||||+||+++.++.+||+|||++.....
T Consensus 84 ~~lv~e~~-~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~ 160 (337)
T cd07858 84 VYIVYELM-DTDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE 160 (337)
T ss_pred EEEEEeCC-CCCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCC
Confidence 89999999 57898888764 4599999999999999999999999999999999999999999999999999854321
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCCCC
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKT 898 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~~~ 898 (998)
.. .......++..|+|||.+.. ..++.++|||||||++|+|++|++||.+.+
T Consensus 161 ~~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 213 (337)
T cd07858 161 KG---------------------------DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKD 213 (337)
T ss_pred Cc---------------------------ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCC
Confidence 10 01123467889999999865 468889999999999999999999998765
Q ss_pred hHHHHHHHHhCC----------------------CC---C----CCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHH
Q 001902 899 RQKTFANILHKD----------------------LK---F----PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 949 (998)
Q Consensus 899 ~~~~~~~i~~~~----------------------~~---~----~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL 949 (998)
....+..+.... .. . ......+..+.+||.+||+.+|.+||| +.+++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps----~~ell 289 (337)
T cd07858 214 YVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRIT----VEEAL 289 (337)
T ss_pred hHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccC----HHHHH
Confidence 443333222100 00 0 011346788999999999999999999 99999
Q ss_pred cCCCccCCChh
Q 001902 950 KHPFFKGVNWA 960 (998)
Q Consensus 950 ~Hp~f~~~~~~ 960 (998)
+||||..+.-.
T Consensus 290 ~h~~~~~~~~~ 300 (337)
T cd07858 290 AHPYLASLHDP 300 (337)
T ss_pred cCcchhhhcCc
Confidence 99999876433
No 268
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=2.1e-35 Score=330.00 Aligned_cols=255 Identities=22% Similarity=0.330 Sum_probs=206.8
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeE--EEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCC
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQY--FAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT 738 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~--valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~ 738 (998)
+..++|++.+.||+|+||.||+|.+..++.. +++|.++.. ........+.+|+.++.++ +|+||+++++++...+
T Consensus 4 ~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~ 81 (303)
T cd05088 4 LEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG 81 (303)
T ss_pred cchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc--CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCC
Confidence 4456899999999999999999999777764 466665532 2334456778899999999 8999999999999999
Q ss_pred eEEEEEecCCCCchhHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCC
Q 001902 739 HVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 804 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g 804 (998)
.+|+||||+++++|.+++.+.. ...++...++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~ 161 (303)
T cd05088 82 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY 161 (303)
T ss_pred CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCC
Confidence 9999999999999999997542 23578999999999999999999999999999999999999999
Q ss_pred cEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHH
Q 001902 805 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 884 (998)
Q Consensus 805 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il 884 (998)
.+||+|||++..... ........++..|+|||++.+..++.++|||||||++
T Consensus 162 ~~kl~dfg~~~~~~~----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 213 (303)
T cd05088 162 VAKIADFGLSRGQEV----------------------------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 213 (303)
T ss_pred cEEeCccccCcccch----------------------------hhhcccCCCcccccCHHHHhccCCcccccchhhhhHH
Confidence 999999998742110 0001112346689999999888899999999999999
Q ss_pred HHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 885 YEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 885 ~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
|+|++ |..||.+.+..+....+... .........+..+.+|+.+||..+|.+||+ +.+++.+
T Consensus 214 ~ellt~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~ 276 (303)
T cd05088 214 WEIVSLGGTPYCGMTCAELYEKLPQG-YRLEKPLNCDDEVYDLMRQCWREKPYERPS----FAQILVS 276 (303)
T ss_pred HHHHhcCCCCcccCChHHHHHHHhcC-CcCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHHH
Confidence 99998 99999887776666555432 222233446788999999999999999999 5555544
No 269
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=5.1e-35 Score=319.71 Aligned_cols=252 Identities=28% Similarity=0.405 Sum_probs=208.9
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++.+.||+|+||.||+|.+..+|+.||+|.++.....+......+.+|+.++++++|+||+++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57999999999999999999999899999999987654445555678889999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCC
Q 001902 745 DYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 822 (998)
Q Consensus 745 E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 822 (998)
||+++++|..++... ....++...+..++.+|+.||.|||+.||+|+||+|+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~- 160 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT- 160 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCC-
Confidence 999999999998642 23458999999999999999999999999999999999999999999999999875432110
Q ss_pred CCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCCh--H
Q 001902 823 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR--Q 900 (998)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~--~ 900 (998)
.......|++.|+|||.+.+..++.++|||||||++|+|++|..||..... .
T Consensus 161 --------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~ 214 (267)
T cd08224 161 --------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY 214 (267)
T ss_pred --------------------------cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHH
Confidence 011234588899999999998899999999999999999999999965432 2
Q ss_pred HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChh
Q 001902 901 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 943 (998)
Q Consensus 901 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 943 (998)
.....+..+..........+..+.++|.+||..+|++||++.+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ 257 (267)
T cd08224 215 SLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISY 257 (267)
T ss_pred HHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHH
Confidence 3333443332221112246778999999999999999999443
No 270
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=4.3e-35 Score=319.59 Aligned_cols=248 Identities=25% Similarity=0.385 Sum_probs=205.9
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEE
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 741 (998)
+..++|++++.||+|+||.||+|.+. .+..+|+|.+..... ....+.+|+.++++++|+||+++++++. ....|
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~ 76 (260)
T cd05070 3 IPRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM----SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIY 76 (260)
T ss_pred CchHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC----CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcE
Confidence 45678999999999999999999874 566799999876432 2356788999999999999999999875 45689
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 821 (998)
++|||+++++|.+++.......+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05070 77 IVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNE 156 (260)
T ss_pred EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcc
Confidence 99999999999999977555568999999999999999999999999999999999999999999999999985432110
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCChH
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 900 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~ 900 (998)
........++..|+|||++.+..++.++||||||+++|+|++ |.+||.+.+..
T Consensus 157 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~ 210 (260)
T cd05070 157 --------------------------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR 210 (260)
T ss_pred --------------------------cccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 001112235678999999988889999999999999999999 99999888777
Q ss_pred HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCCh
Q 001902 901 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH 942 (998)
Q Consensus 901 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~ 942 (998)
+....+... ...+.....+..+.+|+.+||..+|.+|||+.
T Consensus 211 ~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~ 251 (260)
T cd05070 211 EVLEQVERG-YRMPCPQDCPISLHELMLQCWKKDPEERPTFE 251 (260)
T ss_pred HHHHHHHcC-CCCCCCCcCCHHHHHHHHHHcccCcccCcCHH
Confidence 777666543 33344445688999999999999999999943
No 271
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=3.4e-35 Score=319.89 Aligned_cols=251 Identities=22% Similarity=0.326 Sum_probs=209.0
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.++|++++.||+|+||.||++.+.. +..+|+|.+..... ....+.+|+.++++++||||+++++++.....+++|
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM----SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIV 77 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcc----cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEE
Confidence 4579999999999999999998743 45699998875422 235678899999999999999999999988999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
|||+.+++|.+++..... .+++..++.++.||+.||.|||+.|++|+||||+||+++.++.+||+|||.+.......
T Consensus 78 ~e~~~~~~l~~~i~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~-- 154 (256)
T cd05113 78 TEYMSNGCLLNYLREHGK-RFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE-- 154 (256)
T ss_pred EEcCCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCc--
Confidence 999999999999976433 58999999999999999999999999999999999999999999999999885432110
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCChHHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKT 902 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~~~ 902 (998)
........++..|+|||++.+..++.++|||||||++|+|++ |..||...+....
T Consensus 155 ------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~ 210 (256)
T cd05113 155 ------------------------YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSET 210 (256)
T ss_pred ------------------------eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHH
Confidence 001112235678999999998889999999999999999998 9999988877777
Q ss_pred HHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 903 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 903 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
...+...... +.....+..+.+++.+||..||.+||+ +.+|+.+
T Consensus 211 ~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~Rp~----~~~ll~~ 254 (256)
T cd05113 211 VEKVSQGLRL-YRPHLASEKVYAIMYSCWHEKAEERPT----FQQLLSS 254 (256)
T ss_pred HHHHhcCCCC-CCCCCCCHHHHHHHHHHcCCCcccCCC----HHHHHHh
Confidence 7777665433 223346789999999999999999999 7777754
No 272
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=3.1e-35 Score=330.07 Aligned_cols=257 Identities=24% Similarity=0.346 Sum_probs=202.9
Q ss_pred CceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEecCCCCchhHHH
Q 001902 677 DTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLLL 756 (998)
Q Consensus 677 ~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l 756 (998)
++|.||.+.+..+++.||+|++.... ........+..|+.+++.++|+||+++++++...+..+++|||+++++|.+++
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l 90 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDS-CSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLL 90 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccc-cchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHH
Confidence 44556666666799999999998652 23456678999999999999999999999999999999999999999999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcchhhhhccc
Q 001902 757 DRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHK 836 (998)
Q Consensus 757 ~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~ 836 (998)
.......+++..+..++.||+.||.|||+++|+||||||+||+++.+|.++|+|||.+..........
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~------------ 158 (314)
T cd08216 91 KTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQ------------ 158 (314)
T ss_pred HHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccc------------
Confidence 87555568999999999999999999999999999999999999999999999999886542111000
Q ss_pred CCCCcccccccccccccccCCCCcccchhhcC--CCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCC-
Q 001902 837 GQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKF- 913 (998)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~~~~~~- 913 (998)
...........++..|+|||++.. ..++.++|||||||++|+|++|..||........+.....+....
T Consensus 159 --------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 230 (314)
T cd08216 159 --------RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCL 230 (314)
T ss_pred --------cccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccc
Confidence 000111234467889999999976 357889999999999999999999998765544332222211100
Q ss_pred -------------------------------CCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCC
Q 001902 914 -------------------------------PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 958 (998)
Q Consensus 914 -------------------------------~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 958 (998)
+.....+.++.+|+.+||..||++||| +.++|+||||+.+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~ll~~p~~~~~~ 302 (314)
T cd08216 231 LDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPS----ASQLLNHSFFKQCK 302 (314)
T ss_pred cccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcC----HHHHhcCchHhhhc
Confidence 001112457889999999999999999 99999999999764
No 273
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=6.1e-35 Score=316.71 Aligned_cols=246 Identities=22% Similarity=0.326 Sum_probs=201.8
Q ss_pred cccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEecCCCC
Q 001902 671 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 750 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~gg 750 (998)
+.||+|+||.||+|.+..+++.+|+|.+.... .......+.+|+++++.++||||+++++++......|+||||++++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 78 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCC
Confidence 36899999999999999999999999876432 3344567889999999999999999999999999999999999999
Q ss_pred chhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcchh
Q 001902 751 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 830 (998)
Q Consensus 751 sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 830 (998)
+|.+++... ...+++..++.++.|++.||.|||++||+|+||||+|||++.++.+||+|||++........
T Consensus 79 ~L~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~-------- 149 (252)
T cd05084 79 DFLTFLRTE-GPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVY-------- 149 (252)
T ss_pred cHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccc--------
Confidence 999998754 24589999999999999999999999999999999999999999999999999854221000
Q ss_pred hhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhC
Q 001902 831 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHK 909 (998)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~~~~~~i~~~ 909 (998)
........++..|+|||.+.+..++.++|||||||++|+|++ |..||...........+...
T Consensus 150 -----------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~ 212 (252)
T cd05084 150 -----------------ASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQG 212 (252)
T ss_pred -----------------cccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcC
Confidence 000011123467999999999889999999999999999997 99999877766555554443
Q ss_pred CCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHH
Q 001902 910 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 949 (998)
Q Consensus 910 ~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL 949 (998)
...+.....+..+.+|+.+||..+|++||+ +.+++
T Consensus 213 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~~~ 247 (252)
T cd05084 213 -VRLPCPELCPDAVYRLMERCWEYDPGQRPS----FSTVH 247 (252)
T ss_pred -CCCCCcccCCHHHHHHHHHHcCCChhhCcC----HHHHH
Confidence 233334456889999999999999999999 55554
No 274
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=5.1e-35 Score=322.31 Aligned_cols=257 Identities=20% Similarity=0.300 Sum_probs=209.7
Q ss_pred ccCCcccccccCCCCceeEEEEEEcc-----CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 737 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~~-----~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~ 737 (998)
..+.|.+.+.||+|++|.||+|.+.. ++..|++|.+.... .......+..|+.+++.++|+||+++++++...
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC--SEQDESDFLMEALIMSKFNHQNIVRLIGVSFER 81 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC
Confidence 34679999999999999999999977 77899999876432 233445688899999999999999999999988
Q ss_pred CeEEEEEecCCCCchhHHHhhCCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCC---cEEEE
Q 001902 738 THVCLITDYCPGGELFLLLDRQPT-----KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLT 809 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~-----~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g---~vkL~ 809 (998)
+..++||||+++++|.+++..... ..+++..+..++.||+.||.|||+++++|+||||+||+++.++ .+||+
T Consensus 82 ~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 82 LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEec
Confidence 999999999999999999976421 2588999999999999999999999999999999999998765 59999
Q ss_pred eccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc
Q 001902 810 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY 889 (998)
Q Consensus 810 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt 889 (998)
|||++........ ........++..|+|||++.+..++.++|||||||++|+|++
T Consensus 162 dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~ 216 (277)
T cd05036 162 DFGMARDIYRASY-------------------------YRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFS 216 (277)
T ss_pred cCccccccCCccc-------------------------eecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHc
Confidence 9999865321100 000112234568999999998899999999999999999996
Q ss_pred -CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 890 -GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 890 -G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
|..||.+.+.......+... .........+..+.+|+.+||+.+|++||+ +.++++|
T Consensus 217 ~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps----~~~vl~~ 274 (277)
T cd05036 217 LGYMPYPGRTNQEVMEFVTGG-GRLDPPKGCPGPVYRIMTDCWQHTPEDRPN----FATILER 274 (277)
T ss_pred CCCCCCCCCCHHHHHHHHHcC-CcCCCCCCCCHHHHHHHHHHcCCCcccCcC----HHHHHHH
Confidence 99999988776666555443 222333456788999999999999999999 7777765
No 275
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=5.1e-35 Score=325.13 Aligned_cols=254 Identities=30% Similarity=0.476 Sum_probs=213.4
Q ss_pred cccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEec
Q 001902 667 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 746 (998)
Q Consensus 667 y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~ 746 (998)
|.....||+|+||.||++.+..++..+|+|.+... .......+.+|+.+++.++|+||+++++++...+..|+||||
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 98 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR---KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 98 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc---chhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEec
Confidence 34446799999999999999999999999987532 223456688899999999999999999999999999999999
Q ss_pred CCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCC
Q 001902 747 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 826 (998)
Q Consensus 747 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~ 826 (998)
+++++|.+++.. ..+++..++.++.|++.||+|||++|++|+||+|+||+++.++.++|+|||++......
T Consensus 99 ~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~------ 169 (292)
T cd06657 99 LEGGALTDIVTH---TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE------ 169 (292)
T ss_pred CCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccc------
Confidence 999999998754 34899999999999999999999999999999999999999999999999987433210
Q ss_pred cchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHH
Q 001902 827 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANI 906 (998)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i 906 (998)
........|++.|+|||.+.+..++.++|+||||+++|+|++|..||.+.........+
T Consensus 170 ---------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~ 228 (292)
T cd06657 170 ---------------------VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 228 (292)
T ss_pred ---------------------cccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 01123356889999999998888899999999999999999999999887666555444
Q ss_pred HhCC-CCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 907 LHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 907 ~~~~-~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
.... ..+......+..+.+++.+||..+|.+||+ +.++++||||...
T Consensus 229 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~----~~~ll~~~~~~~~ 276 (292)
T cd06657 229 RDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRAT----AAELLKHPFLAKA 276 (292)
T ss_pred HhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcC----HHHHhcChHHhcc
Confidence 3321 122233456788999999999999999999 9999999999975
No 276
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=4.6e-35 Score=319.39 Aligned_cols=252 Identities=24% Similarity=0.371 Sum_probs=209.1
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
.+..++|+++++||+|+||.||+|.. .+++.||+|.+..... ....+.+|+.+++.++|+||+++++++. .+.+
T Consensus 2 ~~~~~~~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~ 75 (260)
T cd05067 2 EVPRETLKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSM----SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPI 75 (260)
T ss_pred ccchHHceeeeeeccCccceEEeeec-CCCceEEEEEecCCCC----cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCc
Confidence 35567899999999999999999986 4578899999875432 2356788999999999999999998874 4678
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
|++|||+++++|.+++.......++...+..++.|++.||+|||+.|++|+||||+||+++.++.++|+|||++......
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05067 76 YIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDN 155 (260)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCC
Confidence 99999999999999997766667999999999999999999999999999999999999999999999999998543210
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCCh
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 899 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~ 899 (998)
. ........++..|+|||++....++.++||||||+++|+|++ |.+||.+.+.
T Consensus 156 ~--------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~ 209 (260)
T cd05067 156 E--------------------------YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN 209 (260)
T ss_pred C--------------------------cccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh
Confidence 0 001122346778999999998889999999999999999998 9999998877
Q ss_pred HHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHH
Q 001902 900 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 949 (998)
Q Consensus 900 ~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL 949 (998)
......+... ...+.....+.++.+|+.+||..+|++||+ +++++
T Consensus 210 ~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~l~ 254 (260)
T cd05067 210 PEVIQNLERG-YRMPRPDNCPEELYELMRLCWKEKPEERPT----FEYLR 254 (260)
T ss_pred HHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHccCChhhCCC----HHHHH
Confidence 6666655443 333444556789999999999999999999 55554
No 277
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=6.4e-35 Score=319.33 Aligned_cols=255 Identities=22% Similarity=0.282 Sum_probs=211.3
Q ss_pred cCCcccccccCCCCceeEEEEEEccC---CeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~---~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
.++|++.+.||+|+||.||+|.+..+ ...+|+|.++... .......+..|+.+++.++|+||+++++++...+..
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPV 80 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCce
Confidence 45799999999999999999998644 4589999887542 344456788899999999999999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
++||||+++++|.+++.... ..++...+..++.|++.||.|||++||+|+||||+|||++.++.++|+|||++......
T Consensus 81 ~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd05033 81 MIITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDS 159 (266)
T ss_pred EEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhccccc
Confidence 99999999999999997653 36899999999999999999999999999999999999999999999999998654311
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCCh
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 899 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~ 899 (998)
... .......++..|+|||.+.+..++.++|||||||++|+|++ |..||.....
T Consensus 160 ~~~-------------------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~ 214 (266)
T cd05033 160 EAT-------------------------YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN 214 (266)
T ss_pred ccc-------------------------eeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH
Confidence 100 00112235678999999998889999999999999999997 9999988777
Q ss_pred HHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 900 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 900 ~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
......+... ...+.....+..+.+|+.+||+.+|++||+ +.+++++
T Consensus 215 ~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~----~~ei~~~ 261 (266)
T cd05033 215 QDVIKAVEDG-YRLPPPMDCPSALYQLMLDCWQKDRNERPT----FSQIVST 261 (266)
T ss_pred HHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcCCCcccCcC----HHHHHHH
Confidence 7666666543 233444557889999999999999999999 5555543
No 278
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=2.2e-35 Score=333.83 Aligned_cols=262 Identities=25% Similarity=0.383 Sum_probs=216.7
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC-----eE
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT-----HV 740 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~-----~~ 740 (998)
+|++.+.||.|++|.||+|.+..+++.||+|.+.... ........+..|+.+++.++|+||+++++++.... .+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF-DDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc-ccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence 5889999999999999999998889999999987542 22344567888999999999999999999987765 88
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
|+||||++ ++|.+++.+. ..+++..++.++.||+.||+|||++||+|+||||+|||++.++.++|+|||++......
T Consensus 80 ~lv~e~~~-~~l~~~l~~~--~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~ 156 (330)
T cd07834 80 YIVTELME-TDLHKVIKSP--QPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPD 156 (330)
T ss_pred EEEecchh-hhHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccc
Confidence 99999995 5898888764 36999999999999999999999999999999999999999999999999998654311
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCCCCCCCh
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTR 899 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf~~~~~ 899 (998)
... ........+++.|+|||++.+. .++.++|+|||||++|+|++|.+||.+.+.
T Consensus 157 ~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~ 212 (330)
T cd07834 157 EDE------------------------KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDY 212 (330)
T ss_pred ccc------------------------cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCH
Confidence 100 0112234688999999999887 788999999999999999999999998887
Q ss_pred HHHHHHHHhCCCCCC-----------------------------CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 900 QKTFANILHKDLKFP-----------------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 900 ~~~~~~i~~~~~~~~-----------------------------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
.+.+..+.......+ .....+..+.+||.+||+.+|.+||+ +.++++
T Consensus 213 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~ll~ 288 (330)
T cd07834 213 IDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRIT----ADEALA 288 (330)
T ss_pred HHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCC----HHHHHh
Confidence 666665554211000 01225678899999999999999999 999999
Q ss_pred CCCccCCCh
Q 001902 951 HPFFKGVNW 959 (998)
Q Consensus 951 Hp~f~~~~~ 959 (998)
||||+++.-
T Consensus 289 ~~~~~~~~~ 297 (330)
T cd07834 289 HPYLAQLHD 297 (330)
T ss_pred CccHHhhcc
Confidence 999998543
No 279
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=2e-36 Score=312.33 Aligned_cols=264 Identities=28% Similarity=0.457 Sum_probs=209.6
Q ss_pred cCCcccccccCCCCceeEEEEEEccCC----eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEee-CC
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSG----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-KT 738 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~----~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~-~~ 738 (998)
...|+++..||+|.||.||+|..+.++ +.||+|.++...-. ........+|+.+++.++||||+.+..+|.. +.
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~-tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDG-TGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCC-CCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 357999999999999999999765442 37999998754221 1223456789999999999999999999876 88
Q ss_pred eEEEEEecCCCCchhHHHhhC---CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecC----CcEEEEec
Q 001902 739 HVCLITDYCPGGELFLLLDRQ---PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN----GHVSLTDF 811 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~---~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~----g~vkL~DF 811 (998)
.+++++||. ..+|..+++.+ ....++...++.|+.||+.|+.|||++-|+||||||.|||+..+ |.|||+||
T Consensus 102 ~v~l~fdYA-EhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 102 KVWLLFDYA-EHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred eEEEEehhh-hhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecc
Confidence 999999999 66888888742 33569999999999999999999999999999999999999987 89999999
Q ss_pred cCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcC
Q 001902 812 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYG 890 (998)
Q Consensus 812 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG 890 (998)
|+++.+... ..+......++.|.+|.|||.+.+. .|+++.||||.|||+.||++-
T Consensus 181 GlaR~~~~p------------------------lkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl 236 (438)
T KOG0666|consen 181 GLARLFNNP------------------------LKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTL 236 (438)
T ss_pred cHHHHhhcc------------------------ccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHcc
Confidence 999775421 1223345567899999999999986 578899999999999999999
Q ss_pred CCCCCCCC---------hHHHHHHHHhC-----CCCCC------CC------------------------CCCcHHHHHH
Q 001902 891 YTPFRGKT---------RQKTFANILHK-----DLKFP------SS------------------------TPTSLHAKQL 926 (998)
Q Consensus 891 ~~Pf~~~~---------~~~~~~~i~~~-----~~~~~------~~------------------------~~~s~~l~~L 926 (998)
++.|.+.. ...++.+|..- .-.+| .. ..-++...+|
T Consensus 237 ~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~L 316 (438)
T KOG0666|consen 237 EPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDL 316 (438)
T ss_pred CccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHH
Confidence 99996532 23445555431 01111 10 1113336789
Q ss_pred HHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 927 MYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 927 l~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
|.+||..||-+|+| +.++|+|+||+.-
T Consensus 317 L~klL~yDP~kRIt----a~qAleh~yF~~d 343 (438)
T KOG0666|consen 317 LQKLLTYDPIKRIT----AEQALEHPYFTED 343 (438)
T ss_pred HHHHhccCchhhcc----HHHHhcccccccC
Confidence 99999999999999 9999999999974
No 280
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=4.5e-35 Score=323.62 Aligned_cols=257 Identities=21% Similarity=0.325 Sum_probs=211.1
Q ss_pred cccCCcccccccCCCCceeEEEEEEccC-----CeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEee
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 736 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~-----~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~ 736 (998)
++..+|++++.||+|+||.||++.+..+ ++.+|+|+++... .......+..|+.++..++||||+++++++..
T Consensus 2 i~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~ 79 (283)
T cd05091 2 INLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTK 79 (283)
T ss_pred CCHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC
Confidence 3456799999999999999999987543 5789999987542 23345667889999999999999999999999
Q ss_pred CCeEEEEEecCCCCchhHHHhhC--------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec
Q 001902 737 KTHVCLITDYCPGGELFLLLDRQ--------------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG 802 (998)
Q Consensus 737 ~~~~~lV~E~~~ggsL~~~l~~~--------------~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~ 802 (998)
.+..++++||+++++|.+++... ....++...+..++.|++.||.|||++||+||||||+|||++.
T Consensus 80 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~ 159 (283)
T cd05091 80 EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFD 159 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecC
Confidence 99999999999999999998531 1234788889999999999999999999999999999999999
Q ss_pred CCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHH
Q 001902 803 NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGI 882 (998)
Q Consensus 803 ~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~ 882 (998)
++.+||+|||++........ ........+++.|+|||++.+..++.++|||||||
T Consensus 160 ~~~~kl~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~ 214 (283)
T cd05091 160 KLNVKISDLGLFREVYAADY-------------------------YKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGV 214 (283)
T ss_pred CCceEecccccccccccchh-------------------------eeeccCccCCccccCHHHHhcCCCCcchhHHHHHH
Confidence 99999999999854321100 01112334678999999998888999999999999
Q ss_pred HHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 883 LLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 883 il~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
++|+|++ |..||.+......+..+...... +....++..+.+|+.+||+.+|.+||+ +.+|+.
T Consensus 215 ~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~RP~----~~~i~~ 278 (283)
T cd05091 215 VLWEVFSYGLQPYCGYSNQDVIEMIRNRQVL-PCPDDCPAWVYTLMLECWNEFPSRRPR----FKDIHS 278 (283)
T ss_pred HHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC-CCCCCCCHHHHHHHHHHhCCCcccCCC----HHHHHH
Confidence 9999998 89999988887777777665432 223457888999999999999999999 666554
No 281
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=6.6e-35 Score=326.80 Aligned_cols=256 Identities=25% Similarity=0.370 Sum_probs=216.6
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
..|...+.||+|+||.||++.+..++..+++|.+.............+.+|+.+++.++|+|++++++++...+..++||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 45888999999999999999999999999999987543334445567788999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||+. ++|.+++... ...+++..+..++.|++.||.|||+++++||||+|+||+++.++.++|+|||++....
T Consensus 95 e~~~-~~l~~~~~~~-~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~------ 166 (308)
T cd06634 95 EYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA------ 166 (308)
T ss_pred EccC-CCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeec------
Confidence 9995 6787777543 2458999999999999999999999999999999999999999999999999874422
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhc---CCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 901 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~ 901 (998)
......|++.|+|||.+. ...++.++|||||||++|+|++|..||...+...
T Consensus 167 -------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~ 221 (308)
T cd06634 167 -------------------------PANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS 221 (308)
T ss_pred -------------------------CcccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH
Confidence 012345888999999985 3457889999999999999999999998877666
Q ss_pred HHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 902 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 902 ~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
....+.....+.......+..+.+||.+||..+|.+||+ +.++++|||+...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~----~~~ll~~~~~~~~ 273 (308)
T cd06634 222 ALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPT----SEVLLKHRFVLRE 273 (308)
T ss_pred HHHHHhhcCCCCcCcccccHHHHHHHHHHhhCCcccCCC----HHHHhhCcccccc
Confidence 666665554444334457788999999999999999999 9999999999884
No 282
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-36 Score=338.43 Aligned_cols=260 Identities=23% Similarity=0.351 Sum_probs=224.3
Q ss_pred ccccccCCcccccccCCCCceeEEEEEEccCCe---E-EEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEE
Q 001902 659 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQ---Y-FAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASF 734 (998)
Q Consensus 659 ~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~---~-valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~ 734 (998)
.+++..++..+.++||+|+||.||++..+..+. . ||+|..+............+.+|+++|++++|||||++||+.
T Consensus 151 ~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa 230 (474)
T KOG0194|consen 151 KWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVA 230 (474)
T ss_pred ccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 456667777888999999999999999865422 3 899998865556778889999999999999999999999999
Q ss_pred eeCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCc
Q 001902 735 QTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 814 (998)
Q Consensus 735 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a 814 (998)
....-++||||+|.||+|.++|++.+. .++..+...++.+.+.||+|||++++|||||-..|+|++.++.+||+|||++
T Consensus 231 ~~~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs 309 (474)
T KOG0194|consen 231 VLEEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLS 309 (474)
T ss_pred cCCCccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccc
Confidence 999999999999999999999998753 5999999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCcccccccccccc-cccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCC
Q 001902 815 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASN-SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYT 892 (998)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~ 892 (998)
.... .. .... ...-...|+|||.+....|++++|||||||++||+++ |..
T Consensus 310 ~~~~---~~-------------------------~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~ 361 (474)
T KOG0194|consen 310 RAGS---QY-------------------------VMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAE 361 (474)
T ss_pred cCCc---ce-------------------------eeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCC
Confidence 5432 00 0000 1124568999999999999999999999999999997 899
Q ss_pred CCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHH
Q 001902 893 PFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 947 (998)
Q Consensus 893 Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~e 947 (998)
||.+........+|.......+.....+.++..++.+|+..+|++||++.+++..
T Consensus 362 Py~g~~~~~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~ 416 (474)
T KOG0194|consen 362 PYPGMKNYEVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKK 416 (474)
T ss_pred CCCCCCHHHHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHH
Confidence 9999999999999977776666666778899999999999999999997765443
No 283
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=5.3e-35 Score=318.20 Aligned_cols=250 Identities=23% Similarity=0.374 Sum_probs=206.7
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
..+|++.+.||+|+||.||++.+. ++..+|+|++..... ....+..|+.+++.++|+||+++++++...+..|+|
T Consensus 3 ~~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05059 3 PSELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM----SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIV 77 (256)
T ss_pred hHHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC----CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEE
Confidence 346899999999999999999885 567899999875432 224577899999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
|||+++++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++........
T Consensus 78 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~- 155 (256)
T cd05059 78 TEYMANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY- 155 (256)
T ss_pred EecCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccc-
Confidence 99999999999997653 3589999999999999999999999999999999999999999999999998854321000
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCChHHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKT 902 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~~~ 902 (998)
.......++..|+|||.+.+..++.++|||||||++|+|++ |.+||...+....
T Consensus 156 -------------------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~ 210 (256)
T cd05059 156 -------------------------TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEV 210 (256)
T ss_pred -------------------------cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHH
Confidence 00111124567999999999899999999999999999998 8999988777666
Q ss_pred HHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 903 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 903 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
...+... ...+.....+..+.+++.+||..+|.+||| +.++++
T Consensus 211 ~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt----~~~~l~ 253 (256)
T cd05059 211 VESVSAG-YRLYRPKLAPTEVYTIMYSCWHEKPEDRPA----FKKLLS 253 (256)
T ss_pred HHHHHcC-CcCCCCCCCCHHHHHHHHHHhcCChhhCcC----HHHHHH
Confidence 6665543 233334457889999999999999999999 666654
No 284
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=6e-35 Score=317.69 Aligned_cols=247 Identities=22% Similarity=0.387 Sum_probs=205.7
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEE-eeCCe
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASF-QTKTH 739 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~-~~~~~ 739 (998)
.+...+|++.+.||+|+||.||++.. .|..+++|.++.. .....+.+|+.++++++|+|++++++++ ...+.
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 74 (256)
T cd05082 2 ALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG 74 (256)
T ss_pred CccHHhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCC-----chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCc
Confidence 35667899999999999999999986 4778999988643 2345678899999999999999999975 45577
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCC
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 819 (998)
.++||||+++++|.+++.......+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++.....
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 154 (256)
T cd05082 75 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 154 (256)
T ss_pred eEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccc
Confidence 99999999999999999876555689999999999999999999999999999999999999999999999998843210
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCC
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 898 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~ 898 (998)
......++..|+|||++.+..++.++|||||||++|+|++ |..||...+
T Consensus 155 ------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~ 204 (256)
T cd05082 155 ------------------------------TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 204 (256)
T ss_pred ------------------------------cCCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC
Confidence 0112234568999999998889999999999999999997 999998877
Q ss_pred hHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHH
Q 001902 899 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 949 (998)
Q Consensus 899 ~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL 949 (998)
.......+... ........++..+.+++.+||+.+|.+||| +.+++
T Consensus 205 ~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~l~ 250 (256)
T cd05082 205 LKDVVPRVEKG-YKMDAPDGCPPVVYDVMKQCWHLDAATRPS----FLQLR 250 (256)
T ss_pred HHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHhcCChhhCcC----HHHHH
Confidence 66665555443 222333456889999999999999999999 55554
No 285
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=6.3e-35 Score=324.50 Aligned_cols=256 Identities=25% Similarity=0.357 Sum_probs=209.6
Q ss_pred ccCCcccccccCCCCceeEEEEEEccCC----------------eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCC
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELCGSG----------------QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF 726 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~----------------~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~n 726 (998)
..++|++++.||+|+||.||+|.+..++ ..||+|.+.... .......+.+|+.+++.++|||
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~~~~ 80 (296)
T cd05051 3 PRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA--SDNAREDFLKEVKILSRLSDPN 80 (296)
T ss_pred chhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhcCCCC
Confidence 3568999999999999999999876543 568999987543 2345667889999999999999
Q ss_pred ccceeEEEeeCCeEEEEEecCCCCchhHHHhhCC---------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCc
Q 001902 727 VPALYASFQTKTHVCLITDYCPGGELFLLLDRQP---------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 797 (998)
Q Consensus 727 Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~---------~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~N 797 (998)
|+++++++..++..++||||+++++|.+++.... ...+++..++.++.|++.||.|||++||+|+||||+|
T Consensus 81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~N 160 (296)
T cd05051 81 IARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRN 160 (296)
T ss_pred EeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhc
Confidence 9999999999999999999999999999997643 1258999999999999999999999999999999999
Q ss_pred EEEecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHH
Q 001902 798 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 877 (998)
Q Consensus 798 ILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDI 877 (998)
|+++.++.++|+|||++....... .........+++.|+|||++.+..++.++||
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 215 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSD-------------------------YYRVQGRAPLPIRWMAWESVLLGKFTTKSDV 215 (296)
T ss_pred eeecCCCceEEccccceeecccCc-------------------------ceeecCcCCCCceecCHHHhhcCCCCccchh
Confidence 999999999999999985432110 0111234456789999999988889999999
Q ss_pred HHHHHHHHHHHc--CCCCCCCCChHHHHHHHHhC------CCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHH
Q 001902 878 WALGILLYEMLY--GYTPFRGKTRQKTFANILHK------DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 949 (998)
Q Consensus 878 wSlG~il~eLlt--G~~Pf~~~~~~~~~~~i~~~------~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL 949 (998)
|||||++|+|++ |..||...+....+..+... ....+.....+.++.+|+.+||+.||.+||| +.+|+
T Consensus 216 ~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt----~~el~ 291 (296)
T cd05051 216 WAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPT----FREIH 291 (296)
T ss_pred hhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCC----HHHHH
Confidence 999999999997 78899887766666655432 1122333446789999999999999999999 66664
No 286
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-37 Score=368.62 Aligned_cols=259 Identities=28% Similarity=0.477 Sum_probs=218.6
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
++.....||.|.||.||.|.+..+|...|+|.++..... ......+.+|..++..++|||+|++|++-.+.+.++|.||
T Consensus 1236 rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFME 1314 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFME 1314 (1509)
T ss_pred eeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHH
Confidence 566778899999999999999999999999988765433 4556677889999999999999999999999999999999
Q ss_pred cCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCC
Q 001902 746 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 825 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 825 (998)
||.+|+|.+++... ...++...+.+..|++.|+.|||+.|||||||||.||+++.+|.+|++|||.|..+.......
T Consensus 1315 yC~~GsLa~ll~~g--ri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~- 1391 (1509)
T KOG4645|consen 1315 YCEGGSLASLLEHG--RIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTM- 1391 (1509)
T ss_pred HhccCcHHHHHHhc--chhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcC-
Confidence 99999999999763 557888888999999999999999999999999999999999999999999997654221110
Q ss_pred CcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC---CCCChhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001902 826 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA---GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 902 (998)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~---~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~ 902 (998)
...-....||+.|||||++.+. +..-+.|||||||++.||+||+.||...+....
T Consensus 1392 ----------------------~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~a 1449 (1509)
T KOG4645|consen 1392 ----------------------PGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWA 1449 (1509)
T ss_pred ----------------------CHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhH
Confidence 0122356899999999999764 456799999999999999999999988776554
Q ss_pred HHHHH-hC-CCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 903 FANIL-HK-DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 903 ~~~i~-~~-~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
+.-.+ .+ ..++|.. +|.+..+||..||..||.+|.+ +.|||.|.|-+.
T Consensus 1450 IMy~V~~gh~Pq~P~~--ls~~g~dFle~Cl~~dP~~Rw~----~~qlle~~f~~~ 1499 (1509)
T KOG4645|consen 1450 IMYHVAAGHKPQIPER--LSSEGRDFLEHCLEQDPKMRWT----ASQLLEHAFGKS 1499 (1509)
T ss_pred HHhHHhccCCCCCchh--hhHhHHHHHHHHHhcCchhhhH----HHHHHHhhcccc
Confidence 44333 33 3344443 8999999999999999999999 999999988654
No 287
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=9.9e-35 Score=314.77 Aligned_cols=257 Identities=30% Similarity=0.437 Sum_probs=216.0
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC--CeEEEE
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THVCLI 743 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~~~~lV 743 (998)
+|.+.+.||+|++|.||+|.+..+++.+++|++..... .......+.+|+.++++++|+||+++++.+... ..+++|
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGD-SEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeecccc-chHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence 47888999999999999999998999999999876532 234567888999999999999999999999988 899999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
|||+++++|.+++.... .+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||.+.........
T Consensus 80 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 157 (260)
T cd06606 80 LEYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG 157 (260)
T ss_pred EEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccc
Confidence 99999999999998753 6999999999999999999999999999999999999999999999999998554311100
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCC-hHHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT-RQKT 902 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~-~~~~ 902 (998)
.......++..|+|||.+.+...+.++||||||+++|+|++|..||.... ....
T Consensus 158 -------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~ 212 (260)
T cd06606 158 -------------------------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAA 212 (260)
T ss_pred -------------------------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHH
Confidence 01223468899999999988889999999999999999999999998876 2333
Q ss_pred HHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 903 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 903 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
...+.............+..+.+|+.+||..||.+||+ +.++++||||
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~----~~~ll~~~~~ 260 (260)
T cd06606 213 LYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPT----ADELLQHPFL 260 (260)
T ss_pred HHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCC----HHHHhhCCCC
Confidence 33333222222223345789999999999999999999 9999999997
No 288
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.3e-34 Score=312.58 Aligned_cols=252 Identities=31% Similarity=0.513 Sum_probs=214.9
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
+|.+.+.||.|++|.||++.+..+++.+++|++..... .....+.+|+.+++.++|+||+++++++......+++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e 77 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVME 77 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEe
Confidence 48888999999999999999988999999999876432 355678889999999999999999999999999999999
Q ss_pred cCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCC
Q 001902 746 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 825 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 825 (998)
|+++++|.+++.... ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 78 ~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~---- 152 (253)
T cd05122 78 FCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTK---- 152 (253)
T ss_pred cCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeeccccccccccc----
Confidence 999999999987753 468999999999999999999999999999999999999999999999999885432110
Q ss_pred CcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001902 826 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 905 (998)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~ 905 (998)
......|+..|+|||.+.+..++.++|+||||+++|+|++|..||...+.......
T Consensus 153 ------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~ 208 (253)
T cd05122 153 ------------------------ARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFK 208 (253)
T ss_pred ------------------------cccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHH
Confidence 02344688999999999988889999999999999999999999988765554444
Q ss_pred HHhCCC-CCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCC
Q 001902 906 ILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 953 (998)
Q Consensus 906 i~~~~~-~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~ 953 (998)
+..... ..+.....+..+.++|.+||..||.+||| +.++++|||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t----~~~~l~~~~ 253 (253)
T cd05122 209 IATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPT----AEQLLKHPF 253 (253)
T ss_pred HHhcCCCCcCcccccCHHHHHHHHHHccCChhhCCC----HHHHhcCCC
Confidence 443222 22222334788999999999999999999 999999998
No 289
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=5.1e-35 Score=324.91 Aligned_cols=261 Identities=21% Similarity=0.340 Sum_probs=212.6
Q ss_pred ccccccCCcccccccCCCCceeEEEEEEccC-----CeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeE
Q 001902 659 GEQINLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYA 732 (998)
Q Consensus 659 ~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~-----~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~ 732 (998)
...+..++|++.+.||+|+||.||++.+... ...+|+|.+.... .......+.+|+.+++++ +|+||+++++
T Consensus 6 ~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~ 83 (293)
T cd05053 6 EWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLG 83 (293)
T ss_pred ccccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC--CHHHHHHHHHHHHHHHhhcCCCCeeeEEE
Confidence 4456667899999999999999999998643 3789999987542 233445688899999999 8999999999
Q ss_pred EEeeCCeEEEEEecCCCCchhHHHhhC--------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcE
Q 001902 733 SFQTKTHVCLITDYCPGGELFLLLDRQ--------------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 798 (998)
Q Consensus 733 ~~~~~~~~~lV~E~~~ggsL~~~l~~~--------------~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NI 798 (998)
++...+.++++|||+++++|..++... ....+++..+..++.||+.||.|||++||+||||||+||
T Consensus 84 ~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Ni 163 (293)
T cd05053 84 VCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNV 163 (293)
T ss_pred EEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeE
Confidence 999999999999999999999998642 245689999999999999999999999999999999999
Q ss_pred EEecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHH
Q 001902 799 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 878 (998)
Q Consensus 799 Li~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIw 878 (998)
|++.++.+||+|||++........ ........++..|+|||++.+..++.++|||
T Consensus 164 l~~~~~~~kL~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 218 (293)
T cd05053 164 LVTEDHVMKIADFGLARDIHHIDY-------------------------YRKTTNGRLPVKWMAPEALFDRVYTHQSDVW 218 (293)
T ss_pred EEcCCCeEEeCccccccccccccc-------------------------eeccCCCCCCccccCHHHhccCCcCccccee
Confidence 999999999999999865321100 0011122356789999999888899999999
Q ss_pred HHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 879 ALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 879 SlG~il~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
||||++|+|++ |..||.+......+..+... .........+..+.+|+.+||..||.+||| +.+++++
T Consensus 219 slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~eil~~ 287 (293)
T cd05053 219 SFGVLLWEIFTLGGSPYPGIPVEELFKLLKEG-YRMEKPQNCTQELYHLMRDCWHEVPSQRPT----FKQLVED 287 (293)
T ss_pred ehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcC-CcCCCCCCCCHHHHHHHHHHcccCcccCcC----HHHHHHH
Confidence 99999999997 99999888776666655443 233334456789999999999999999999 6665543
No 290
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.2e-34 Score=315.64 Aligned_cols=249 Identities=20% Similarity=0.291 Sum_probs=202.2
Q ss_pred ccCCCCceeEEEEEE--ccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEecCCC
Q 001902 672 PLGSGDTGSVHLVEL--CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPG 749 (998)
Q Consensus 672 ~LG~G~~g~Vy~a~~--~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~g 749 (998)
.||+|+||.||+|.+ ..++..+|+|+++... ........+.+|+.+++.++|+||+++++++. .+..++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-NDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC-CcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCC
Confidence 689999999999965 4568899999987542 23445677889999999999999999999875 4567899999999
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcch
Q 001902 750 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 829 (998)
Q Consensus 750 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 829 (998)
++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++.........
T Consensus 80 ~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~------ 151 (257)
T cd05116 80 GPLNKFLQKN--KHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENY------ 151 (257)
T ss_pred CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCe------
Confidence 9999999764 45899999999999999999999999999999999999999999999999998654311100
Q ss_pred hhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHh
Q 001902 830 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILH 908 (998)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~~~~~~i~~ 908 (998)
........++..|+|||.+....++.++|||||||++|+|++ |..||...+.......+..
T Consensus 152 ------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~ 213 (257)
T cd05116 152 ------------------YKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIES 213 (257)
T ss_pred ------------------eeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHC
Confidence 001112235678999999988889999999999999999997 9999988777666666654
Q ss_pred CCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHH
Q 001902 909 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 949 (998)
Q Consensus 909 ~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL 949 (998)
+. ..+.....+.++.+||.+||+.||.+||++..+...|.
T Consensus 214 ~~-~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~ 253 (257)
T cd05116 214 GE-RMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLR 253 (257)
T ss_pred CC-CCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHh
Confidence 43 23333457889999999999999999999655544443
No 291
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=3.3e-35 Score=334.25 Aligned_cols=257 Identities=30% Similarity=0.467 Sum_probs=209.2
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC------C
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------T 738 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------~ 738 (998)
++|.+.+.||+|+||.||+|.+..+|+.||+|.+.+... .......+.+|+.+++.++|+||+++++++... .
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ-SEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc-cccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 589999999999999999999988999999999875422 223345677899999999999999999998654 3
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccC
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 818 (998)
..|+||||+. .+|..++. ..+++..+..++.|++.||+|||++||+||||||+||+++.++.++|+|||++....
T Consensus 94 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~ 168 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHAD 168 (342)
T ss_pred eEEEEecccc-cCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCC
Confidence 5699999994 57776652 248999999999999999999999999999999999999999999999999984321
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 897 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~~ 897 (998)
. ......+++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.
T Consensus 169 ~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~ 218 (342)
T cd07879 169 A------------------------------EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 218 (342)
T ss_pred C------------------------------CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 0 1123467889999999876 46788999999999999999999999987
Q ss_pred ChHHHHHHHHhCC-----------------------CCCCC------CCCCcHHHHHHHHHccccCccCcCCChhcHHHH
Q 001902 898 TRQKTFANILHKD-----------------------LKFPS------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 948 (998)
Q Consensus 898 ~~~~~~~~i~~~~-----------------------~~~~~------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~el 948 (998)
+....+..+.... ...+. ....+..+.+||.+||+.||.+||+ +.++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~----~~e~ 294 (342)
T cd07879 219 DYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLT----ATEA 294 (342)
T ss_pred CHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcC----HHHH
Confidence 7655554443310 00000 1235678899999999999999999 9999
Q ss_pred HcCCCccCCChhh
Q 001902 949 KKHPFFKGVNWAL 961 (998)
Q Consensus 949 L~Hp~f~~~~~~~ 961 (998)
+.||||+.+....
T Consensus 295 l~h~~f~~~~~~~ 307 (342)
T cd07879 295 LEHPYFDSFRDAD 307 (342)
T ss_pred hcCcchhhccccc
Confidence 9999999986543
No 292
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=6.8e-35 Score=331.67 Aligned_cols=259 Identities=24% Similarity=0.376 Sum_probs=207.4
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC------
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 737 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------ 737 (998)
.++|.+.+.||.|+||.||+|.+..+|+.||+|.+.... ......+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~---~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTD---PQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTE 80 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCC---CchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccc
Confidence 368999999999999999999999999999999986542 23456678899999999999999999876543
Q ss_pred --------CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec-CCcEEE
Q 001902 738 --------THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSL 808 (998)
Q Consensus 738 --------~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~-~g~vkL 808 (998)
...|+||||++ ++|.+++.. ..+++..++.++.||+.||.|||+.||+||||||+||+++. ++.++|
T Consensus 81 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl 156 (342)
T cd07854 81 DVGSLTELNSVYIVQEYME-TDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKI 156 (342)
T ss_pred ccccccccceEEEEeeccc-ccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEE
Confidence 36899999995 689888854 34899999999999999999999999999999999999984 567899
Q ss_pred EeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHH
Q 001902 809 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEM 887 (998)
Q Consensus 809 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eL 887 (998)
+|||++........ .........|+..|+|||.+.. ..++.++|||||||++|+|
T Consensus 157 ~dfg~~~~~~~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el 212 (342)
T cd07854 157 GDFGLARIVDPHYS------------------------HKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEM 212 (342)
T ss_pred CCcccceecCCccc------------------------cccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHH
Confidence 99999854321100 0011122357889999998754 5678899999999999999
Q ss_pred HcCCCCCCCCChHHHHHHHHhCCC----------------------CCC------CCCCCcHHHHHHHHHccccCccCcC
Q 001902 888 LYGYTPFRGKTRQKTFANILHKDL----------------------KFP------SSTPTSLHAKQLMYRLLHRDPKSRL 939 (998)
Q Consensus 888 ltG~~Pf~~~~~~~~~~~i~~~~~----------------------~~~------~~~~~s~~l~~Ll~~~L~~dP~~Rp 939 (998)
++|..||.+.+.......+..... ..+ .....+.++.+||.+||+.||.+||
T Consensus 213 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 292 (342)
T cd07854 213 LTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRL 292 (342)
T ss_pred HhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhcc
Confidence 999999988776555554433210 000 0123567889999999999999999
Q ss_pred CChhcHHHHHcCCCccCC
Q 001902 940 GSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 940 t~~~~a~elL~Hp~f~~~ 957 (998)
| +.++++||||+.+
T Consensus 293 t----~~ell~h~~~~~~ 306 (342)
T cd07854 293 T----AEEALMHPYMSCY 306 (342)
T ss_pred C----HHHHhCCCccccc
Confidence 9 9999999999864
No 293
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=8.6e-35 Score=323.00 Aligned_cols=255 Identities=21% Similarity=0.295 Sum_probs=209.6
Q ss_pred ccCCcccccccCCCCceeEEEEEEc-----cCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 737 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~-----~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~ 737 (998)
...+|.+.+.||+|+||.||+|.+. .++..+++|.+... .......+.+|+.++++++|+||+++++++...
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 79 (291)
T cd05094 3 KRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP---TLAARKDFQREAELLTNLQHEHIVKFYGVCGDG 79 (291)
T ss_pred chHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc---cHHHHHHHHHHHHHHhcCCCCCcceEEEEEccC
Confidence 3457999999999999999999863 34567899987643 233345678899999999999999999999999
Q ss_pred CeEEEEEecCCCCchhHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecC
Q 001902 738 THVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN 803 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~ 803 (998)
+..++||||+++++|.+++.... ...+++..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~ 159 (291)
T cd05094 80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGAN 159 (291)
T ss_pred CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccC
Confidence 99999999999999999997542 2348899999999999999999999999999999999999999
Q ss_pred CcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHH
Q 001902 804 GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGIL 883 (998)
Q Consensus 804 g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~i 883 (998)
+.++|+|||++........ ........++..|+|||++.+..++.++|||||||+
T Consensus 160 ~~~~l~dfg~a~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 214 (291)
T cd05094 160 LLVKIGDFGMSRDVYSTDY-------------------------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVI 214 (291)
T ss_pred CcEEECCCCcccccCCCce-------------------------eecCCCCCcceeecChHHhccCCCCchhhHHHHHHH
Confidence 9999999999854321100 011223457889999999999999999999999999
Q ss_pred HHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHH
Q 001902 884 LYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 946 (998)
Q Consensus 884 l~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~ 946 (998)
+|+|++ |..||...+.......+..+.... .....+..+.+|+.+||..+|.+||++.++++
T Consensus 215 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 215 LWEIFTYGKQPWFQLSNTEVIECITQGRVLE-RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred HHHHHhCCCCCCCCCCHHHHHHHHhCCCCCC-CCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 999998 999998888777766665544332 23346788999999999999999999555433
No 294
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.1e-34 Score=320.44 Aligned_cols=253 Identities=20% Similarity=0.293 Sum_probs=208.5
Q ss_pred ccCCcccccccCCCCceeEEEEEEc-----cCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 737 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~-----~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~ 737 (998)
+..+|++.++||+|+||.||++... .++..+++|.+... .......+.+|+++++.++|+||+++++++...
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 79 (280)
T cd05092 3 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTVLQHQHIVRFYGVCTEG 79 (280)
T ss_pred ChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC---CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecC
Confidence 4567899999999999999999742 35678999987643 334556788999999999999999999999999
Q ss_pred CeEEEEEecCCCCchhHHHhhCCC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCC
Q 001902 738 THVCLITDYCPGGELFLLLDRQPT-------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 804 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~-------------~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g 804 (998)
+..+++|||+++++|.+++..... ..+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~ 159 (280)
T cd05092 80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGL 159 (280)
T ss_pred CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCC
Confidence 999999999999999999976421 3488899999999999999999999999999999999999999
Q ss_pred cEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHH
Q 001902 805 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 884 (998)
Q Consensus 805 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il 884 (998)
.++|+|||++........ ........+++.|+|||++.+..++.++|||||||++
T Consensus 160 ~~kL~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 214 (280)
T cd05092 160 VVKIGDFGMSRDIYSTDY-------------------------YRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVL 214 (280)
T ss_pred CEEECCCCceeEcCCCce-------------------------eecCCCccccccccCHHHhccCCcCchhhHHHHHHHH
Confidence 999999999854321100 0011223457889999999999999999999999999
Q ss_pred HHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhc
Q 001902 885 YEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 944 (998)
Q Consensus 885 ~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 944 (998)
|+|++ |.+||...........+.... .......++..+.+|+.+||+.||.+||++.++
T Consensus 215 ~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l 274 (280)
T cd05092 215 WEIFTYGKQPWYQLSNTEAIECITQGR-ELERPRTCPPEVYAIMQGCWQREPQQRMVIKDI 274 (280)
T ss_pred HHHHcCCCCCCccCCHHHHHHHHHcCc-cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHH
Confidence 99998 999998877777666665543 223334578889999999999999999994443
No 295
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=9.7e-35 Score=318.22 Aligned_cols=253 Identities=23% Similarity=0.324 Sum_probs=208.7
Q ss_pred cCCcccccccCCCCceeEEEEEEccCC---eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSG---QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~---~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
..+|++.+.||+|+||.||+|.+..++ ..+|+|.++... .......+.+|+.+++.++||||+++++++..++.+
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPV 80 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence 467999999999999999999986444 379999887542 233456788899999999999999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
|+||||+++++|.+++.... ..++...+..++.|++.||.|||++|++||||||+|||++.++.++|+|||++......
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd05066 81 MIVTEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 159 (267)
T ss_pred EEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccc
Confidence 99999999999999997653 45899999999999999999999999999999999999999999999999998654311
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCCh
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 899 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~ 899 (998)
... ........++..|+|||++.+..++.++|+|||||++|++++ |..||.....
T Consensus 160 ~~~------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~ 215 (267)
T cd05066 160 PEA------------------------AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN 215 (267)
T ss_pred cce------------------------eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCH
Confidence 100 000111234568999999998889999999999999999886 9999988877
Q ss_pred HHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhc
Q 001902 900 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 944 (998)
Q Consensus 900 ~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 944 (998)
......+... ...+.....+..+.+++.+||+.+|.+||++.++
T Consensus 216 ~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i 259 (267)
T cd05066 216 QDVIKAIEEG-YRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQI 259 (267)
T ss_pred HHHHHHHhCC-CcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHH
Confidence 6666666544 3445455678899999999999999999994443
No 296
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.2e-34 Score=314.98 Aligned_cols=249 Identities=24% Similarity=0.366 Sum_probs=211.1
Q ss_pred cccCCCCceeEEEEEEccC---CeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEecC
Q 001902 671 KPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYC 747 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~~---~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~ 747 (998)
+.||+|+||.||+|.+... +..|++|.+....... ....+..|+.+++.++|+||+++++++.....+++||||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 78 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE--ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYM 78 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh--HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEec
Confidence 4689999999999999765 8999999998653322 4678889999999999999999999999999999999999
Q ss_pred CCCchhHHHhhCC-------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 748 PGGELFLLLDRQP-------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 748 ~ggsL~~~l~~~~-------~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
++++|.+++.... ...+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||.+......
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 158 (262)
T cd00192 79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDD 158 (262)
T ss_pred cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccc
Confidence 9999999997641 356999999999999999999999999999999999999999999999999998654311
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCCh
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 899 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~ 899 (998)
.. ........+++.|+|||.+....++.++|||||||++|+|++ |..||.....
T Consensus 159 ~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~ 213 (262)
T cd00192 159 DY-------------------------YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN 213 (262)
T ss_pred cc-------------------------cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH
Confidence 10 011234457889999999988889999999999999999998 6999999877
Q ss_pred HHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 900 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 900 ~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
......+... ...+.....+.++.+++.+||+.+|.+||+ +.++++|
T Consensus 214 ~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~l~~~ 260 (262)
T cd00192 214 EEVLEYLRKG-YRLPKPEYCPDELYELMLSCWQLDPEDRPT----FSELVER 260 (262)
T ss_pred HHHHHHHHcC-CCCCCCccCChHHHHHHHHHccCCcccCcC----HHHHHHh
Confidence 7777766653 233334456889999999999999999999 8888765
No 297
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1e-34 Score=320.89 Aligned_cols=254 Identities=24% Similarity=0.437 Sum_probs=208.2
Q ss_pred cccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC---CCCCccceeEEEeeCCe----
Q 001902 667 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML---DHPFVPALYASFQTKTH---- 739 (998)
Q Consensus 667 y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l---~h~nIv~l~~~~~~~~~---- 739 (998)
|++.+.||.|+||.||++.+..+++.||+|.++.... .......+.+|+.+++++ +|+||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS-EEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccc-cchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 6788999999999999999988899999999975432 222334566787777666 69999999999987776
Q ss_pred -EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccC
Q 001902 740 -VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 740 -~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 818 (998)
++++|||++ ++|.+++.......+++..++.++.||+.||.|||+++++|+||+|+||+++.++.++|+|||++....
T Consensus 80 ~~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~ 158 (287)
T cd07838 80 KLTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYS 158 (287)
T ss_pred eeEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceecc
Confidence 999999995 589998877544568999999999999999999999999999999999999999999999999885432
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 898 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~ 898 (998)
... ......++..|+|||++.+..++.++|||||||++|+|++|.+||.+..
T Consensus 159 ~~~----------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~ 210 (287)
T cd07838 159 FEM----------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTS 210 (287)
T ss_pred CCc----------------------------ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCC
Confidence 110 0112347889999999999889999999999999999999999999888
Q ss_pred hHHHHHHHHhCC-----CCCC-----------C---------CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCC
Q 001902 899 RQKTFANILHKD-----LKFP-----------S---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 953 (998)
Q Consensus 899 ~~~~~~~i~~~~-----~~~~-----------~---------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~ 953 (998)
..+.+.++.... ..++ . ....+..+.+||.+||+.||.+||+ +.++++|||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~----~~~il~~~~ 286 (287)
T cd07838 211 EADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRIS----AFEALQHPY 286 (287)
T ss_pred hHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCC----HHHHhcCcC
Confidence 777666665421 0000 0 0123567789999999999999999 999999999
Q ss_pred c
Q 001902 954 F 954 (998)
Q Consensus 954 f 954 (998)
|
T Consensus 287 ~ 287 (287)
T cd07838 287 F 287 (287)
T ss_pred C
Confidence 8
No 298
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.3e-34 Score=315.84 Aligned_cols=251 Identities=24% Similarity=0.343 Sum_probs=205.6
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEE
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 741 (998)
+..++|.+...||+|++|.||+|.+..+ ..+|+|.+.... .....+.+|+.+++.++|+|++++++++. .+..+
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~ 76 (260)
T cd05069 3 IPRESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGT----MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIY 76 (260)
T ss_pred CChHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCC----ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcE
Confidence 3456799999999999999999998554 469999876532 12356778999999999999999998875 45689
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 821 (998)
+||||+++++|.+++.......++...+..++.||+.||.|||+.||+|+||||+||+++.++.++|+|||++.......
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05069 77 IVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE 156 (260)
T ss_pred EEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCc
Confidence 99999999999999977555568999999999999999999999999999999999999999999999999985432110
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCChH
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 900 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~ 900 (998)
........++..|+|||++.+..++.++||||||+++|+|++ |..||.+....
T Consensus 157 --------------------------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~ 210 (260)
T cd05069 157 --------------------------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR 210 (260)
T ss_pred --------------------------ccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 001112246778999999988889999999999999999999 99999988777
Q ss_pred HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHH
Q 001902 901 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 949 (998)
Q Consensus 901 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL 949 (998)
.....+... ...+.....+..+.+|+.+||..||.+||+ +++++
T Consensus 211 ~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~i~ 254 (260)
T cd05069 211 EVLEQVERG-YRMPCPQGCPESLHELMKLCWKKDPDERPT----FEYIQ 254 (260)
T ss_pred HHHHHHHcC-CCCCCCcccCHHHHHHHHHHccCCcccCcC----HHHHH
Confidence 766665543 333334456788999999999999999999 55544
No 299
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=7.2e-35 Score=331.87 Aligned_cols=255 Identities=27% Similarity=0.423 Sum_probs=208.7
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC------
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 737 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------ 737 (998)
.++|.+.+.||+|+||.||++.+..+++.||+|++.+... .......+.+|+.++++++|+||+++++++...
T Consensus 16 ~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (345)
T cd07877 16 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 94 (345)
T ss_pred cCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch-hhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccc
Confidence 4789999999999999999999999999999999875422 223345677899999999999999999988543
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
...|++++++ +++|.+++... .+++..++.++.||+.||.|||++||+||||||+||+++.++.++|+|||++...
T Consensus 95 ~~~~lv~~~~-~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~ 170 (345)
T cd07877 95 NDVYLVTHLM-GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT 170 (345)
T ss_pred ccEEEEehhc-ccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccccccc
Confidence 4578999988 88998887653 4899999999999999999999999999999999999999999999999988432
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 896 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~ 896 (998)
.. ......|++.|+|||.+.+ ..++.++|||||||++|+|++|+.||..
T Consensus 171 ~~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~ 220 (345)
T cd07877 171 DD------------------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 220 (345)
T ss_pred cc------------------------------cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 10 1123468899999999866 5678899999999999999999999987
Q ss_pred CChHHHHHHHHhCCC-----------------------CCCC------CCCCcHHHHHHHHHccccCccCcCCChhcHHH
Q 001902 897 KTRQKTFANILHKDL-----------------------KFPS------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 947 (998)
Q Consensus 897 ~~~~~~~~~i~~~~~-----------------------~~~~------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~e 947 (998)
.+....+..+..... ..+. ....+..+.+||.+||+.||.+||+ +.+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t----~~e 296 (345)
T cd07877 221 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT----AAQ 296 (345)
T ss_pred CCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCC----HHH
Confidence 766554444332110 0000 1134678899999999999999999 999
Q ss_pred HHcCCCccCC
Q 001902 948 IKKHPFFKGV 957 (998)
Q Consensus 948 lL~Hp~f~~~ 957 (998)
++.||||++.
T Consensus 297 ~l~h~~f~~~ 306 (345)
T cd07877 297 ALAHAYFAQY 306 (345)
T ss_pred HhcChhhhhc
Confidence 9999999974
No 300
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.3e-34 Score=317.65 Aligned_cols=253 Identities=24% Similarity=0.338 Sum_probs=205.4
Q ss_pred cccccccCCCCceeEEEEEEcc---CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC-----
Q 001902 667 FRPIKPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----- 738 (998)
Q Consensus 667 y~~~~~LG~G~~g~Vy~a~~~~---~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~----- 738 (998)
|++.+.||+|+||.||+|.... ++..||+|.++.... .......+.+|+.+++.++|+||+++++++....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 79 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH-TYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKI 79 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC-CHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccC
Confidence 6788999999999999999754 347899999875422 3344567889999999999999999999886544
Q ss_pred -eEEEEEecCCCCchhHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccC
Q 001902 739 -HVCLITDYCPGGELFLLLDRQ----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 813 (998)
Q Consensus 739 -~~~lV~E~~~ggsL~~~l~~~----~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~ 813 (998)
..++||||+++++|..++... ....+++..+..++.|++.||.|||+++|+||||||+||++++++.+||+|||+
T Consensus 80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~ 159 (273)
T cd05035 80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGL 159 (273)
T ss_pred cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccc
Confidence 389999999999999888542 223589999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCC
Q 001902 814 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYT 892 (998)
Q Consensus 814 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~ 892 (998)
+......... .......++..|+|||++.+..++.++|||||||++|+|++ |.+
T Consensus 160 ~~~~~~~~~~-------------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~ 214 (273)
T cd05035 160 SKKIYSGDYY-------------------------RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQT 214 (273)
T ss_pred eeeccccccc-------------------------cccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCC
Confidence 8654211100 01112235678999999988889999999999999999998 999
Q ss_pred CCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 893 PFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 893 Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
||.+......+..+.... ........+..+.+++.+||..||.+||+ +.++++
T Consensus 215 p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~e~~~ 267 (273)
T cd05035 215 PYPGVENHEIYDYLRHGN-RLKQPEDCLDELYDLMYSCWRADPKDRPT----FTKLRE 267 (273)
T ss_pred CCCCCCHHHHHHHHHcCC-CCCCCcCCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence 998888777776665543 23334457889999999999999999999 665554
No 301
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.4e-34 Score=313.94 Aligned_cols=254 Identities=28% Similarity=0.449 Sum_probs=217.9
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
+|++.+.||.|+||.||++.+..+++.+++|.+...... ......+..|+.+++.++|+||+++++++......|+|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMS-QKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhcc-HHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEeh
Confidence 488999999999999999999999999999998765432 3445677789999999999999999999999999999999
Q ss_pred cCCCCchhHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 746 YCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 746 ~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
|+++++|.+++.+. ....+++..+..++.|++.||.|||++|++|+||+|+||+++.++.+||+|||++......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~--- 156 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN--- 156 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC---
Confidence 99999999998662 2345899999999999999999999999999999999999999999999999998553211
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 903 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~ 903 (998)
......|++.|+|||.+.+..++.++|+||||+++|+|++|..||...+.....
T Consensus 157 --------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~ 210 (256)
T cd08530 157 --------------------------MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLR 210 (256)
T ss_pred --------------------------CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 111235788999999999988999999999999999999999999988876666
Q ss_pred HHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 904 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 904 ~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
..+....... .....+.++.+++.+||..+|.+||+ +.++++||++
T Consensus 211 ~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~~l~~p~~ 256 (256)
T cd08530 211 YKVQRGKYPP-IPPIYSQDLQNFIRSMLQVKPKLRPN----CDKILASPAV 256 (256)
T ss_pred HHHhcCCCCC-CchhhCHHHHHHHHHHcCCCcccCCC----HHHHhcCCCC
Confidence 6665544332 22356788999999999999999999 9999999984
No 302
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.7e-34 Score=318.46 Aligned_cols=254 Identities=20% Similarity=0.309 Sum_probs=206.7
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCe----EEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 737 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~----~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~ 737 (998)
+...+|++++.||.|+||.||+|.+..++. .||+|++.... .......+.+|+.++..++|+||+++++++..
T Consensus 4 l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~- 80 (279)
T cd05109 4 LKETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT--SPKANKEILDEAYVMAGVGSPYVCRLLGICLT- 80 (279)
T ss_pred cchhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC--CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-
Confidence 456789999999999999999999877766 48999887532 33445678889999999999999999998875
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
...+++|||+++|+|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 81 ~~~~l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~ 159 (279)
T cd05109 81 STVQLVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (279)
T ss_pred CCcEEEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeec
Confidence 45789999999999999987642 45899999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 896 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~ 896 (998)
...... .......+++.|+|||.+.+..++.++|||||||++|+|++ |..||..
T Consensus 160 ~~~~~~-------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 214 (279)
T cd05109 160 DIDETE-------------------------YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDG 214 (279)
T ss_pred ccccce-------------------------eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Confidence 311100 00111235678999999998889999999999999999998 9999987
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHH
Q 001902 897 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 949 (998)
Q Consensus 897 ~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL 949 (998)
.........+.. ....+.....+..+.+++.+||..||++||+ +.+++
T Consensus 215 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~----~~~l~ 262 (279)
T cd05109 215 IPAREIPDLLEK-GERLPQPPICTIDVYMIMVKCWMIDSECRPR----FRELV 262 (279)
T ss_pred CCHHHHHHHHHC-CCcCCCCccCCHHHHHHHHHHcCCChhhCcC----HHHHH
Confidence 766555444433 3333444567889999999999999999999 55555
No 303
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.9e-34 Score=313.62 Aligned_cols=245 Identities=22% Similarity=0.337 Sum_probs=207.3
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEE
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 741 (998)
+...+|++.+.||.|+||.||+|.. .|+.+|+|.+..... ....+.+|+.+++.++|+||+++++++...+..|
T Consensus 3 ~~~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 76 (256)
T cd05039 3 INSKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDST----AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLY 76 (256)
T ss_pred cChhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchh----HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeE
Confidence 4567899999999999999999987 478999999875422 4567889999999999999999999999999999
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 821 (998)
+||||+++++|.+++.......+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||.+......
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~- 155 (256)
T cd05039 77 IVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG- 155 (256)
T ss_pred EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccc-
Confidence 9999999999999998765457999999999999999999999999999999999999999999999999998543100
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCChH
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 900 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~ 900 (998)
.....++..|+|||++....++.++|||||||++|+|++ |..||......
T Consensus 156 -----------------------------~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~ 206 (256)
T cd05039 156 -----------------------------QDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK 206 (256)
T ss_pred -----------------------------cccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 001234567999999988889999999999999999997 99999888766
Q ss_pred HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChh
Q 001902 901 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 943 (998)
Q Consensus 901 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 943 (998)
.....+... .........+..+.+||.+||..+|.+||++.+
T Consensus 207 ~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 248 (256)
T cd05039 207 DVVPHVEKG-YRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQ 248 (256)
T ss_pred HHHHHHhcC-CCCCCccCCCHHHHHHHHHHhccChhhCcCHHH
Confidence 665555443 222333456789999999999999999999433
No 304
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=2e-34 Score=313.47 Aligned_cols=248 Identities=22% Similarity=0.339 Sum_probs=206.8
Q ss_pred cccCCCCceeEEEEEEcc-CC--eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEecC
Q 001902 671 KPLGSGDTGSVHLVELCG-SG--QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYC 747 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~-~~--~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~ 747 (998)
+.||+|++|.||+|.+.. .+ ..+|+|.+...... ...+.+.+|+.++++++|+||+++++.+.. ...++||||+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~ 77 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELA 77 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEec
Confidence 468999999999999855 33 36999999876433 556788899999999999999999999988 8999999999
Q ss_pred CCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCc
Q 001902 748 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 827 (998)
Q Consensus 748 ~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~ 827 (998)
++++|.+++.......+++..++.++.|++.||.|||++|++|+||||+||+++.++.+||+|||++.........
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~---- 153 (257)
T cd05040 78 PLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH---- 153 (257)
T ss_pred CCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccc----
Confidence 9999999998754356899999999999999999999999999999999999999999999999998654321100
Q ss_pred chhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHH
Q 001902 828 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANI 906 (998)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~~~~~~i 906 (998)
........++..|+|||++.+..++.++|||||||++|+|++ |..||...+..+....+
T Consensus 154 --------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~ 213 (257)
T cd05040 154 --------------------YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKI 213 (257)
T ss_pred --------------------eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 011113457788999999999899999999999999999998 99999888877777776
Q ss_pred HhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHH
Q 001902 907 LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 949 (998)
Q Consensus 907 ~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL 949 (998)
......++.....+..+.+++.+||+.+|.+||+ +.+++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~~~ 252 (257)
T cd05040 214 DKEGERLERPEACPQDIYNVMLQCWAHNPADRPT----FAALR 252 (257)
T ss_pred HhcCCcCCCCccCCHHHHHHHHHHCCCCcccCCC----HHHHH
Confidence 6544444444456789999999999999999999 55554
No 305
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.2e-34 Score=335.01 Aligned_cols=259 Identities=22% Similarity=0.289 Sum_probs=209.7
Q ss_pred cccccCCcccccccCCCCceeEEEEEEc-----cCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCccceeEE
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYAS 733 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~~~-----~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~ 733 (998)
+.+..++|.+.+.||+|+||.||+|.+. .+++.||+|+++... .......+.+|+.+|.++. ||||++++++
T Consensus 32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~E~~~l~~l~~H~niv~~~~~ 109 (401)
T cd05107 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA--RSSEKQALMSELKIMSHLGPHLNIVNLLGA 109 (401)
T ss_pred ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC--ChhHHHHHHHHHHHHHhcCCCCCeEEEEEE
Confidence 4556678999999999999999999964 346789999997542 2233456888999999997 9999999999
Q ss_pred EeeCCeEEEEEecCCCCchhHHHhhCCC----------------------------------------------------
Q 001902 734 FQTKTHVCLITDYCPGGELFLLLDRQPT---------------------------------------------------- 761 (998)
Q Consensus 734 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~---------------------------------------------------- 761 (998)
+...+.+++|||||++|+|.+++.+...
T Consensus 110 ~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (401)
T cd05107 110 CTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADY 189 (401)
T ss_pred EccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCc
Confidence 9999999999999999999999965321
Q ss_pred --------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCc
Q 001902 762 --------------------------------------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 797 (998)
Q Consensus 762 --------------------------------------------~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~N 797 (998)
..++...+..++.||+.||+|||+++|+||||||+|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~N 269 (401)
T cd05107 190 VPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARN 269 (401)
T ss_pred cchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcce
Confidence 236677888999999999999999999999999999
Q ss_pred EEEecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHH
Q 001902 798 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 877 (998)
Q Consensus 798 ILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDI 877 (998)
||++.++.+||+|||++........ ........+++.|+|||++.+..++.++||
T Consensus 270 iLl~~~~~~kL~DfGla~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 324 (401)
T cd05107 270 VLICEGKLVKICDFGLARDIMRDSN-------------------------YISKGSTFLPLKWMAPESIFNNLYTTLSDV 324 (401)
T ss_pred EEEeCCCEEEEEecCcceecccccc-------------------------cccCCCcCCCCceeChHHhcCCCCCcHhHH
Confidence 9999999999999999854321100 011123457889999999998889999999
Q ss_pred HHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcH
Q 001902 878 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGA 945 (998)
Q Consensus 878 wSlG~il~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a 945 (998)
|||||++|+|++ |..||......+.....+......+.....+.++.+|+.+||..+|.+||++.+++
T Consensus 325 wslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell 393 (401)
T cd05107 325 WSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLV 393 (401)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence 999999999998 89999876666655555554444444445788999999999999999999944443
No 306
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.8e-34 Score=316.69 Aligned_cols=253 Identities=23% Similarity=0.295 Sum_probs=203.8
Q ss_pred cccccccCCCCceeEEEEEEccCCe--EEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEee------CC
Q 001902 667 FRPIKPLGSGDTGSVHLVELCGSGQ--YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------KT 738 (998)
Q Consensus 667 y~~~~~LG~G~~g~Vy~a~~~~~~~--~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~------~~ 738 (998)
|.+.+.||+|+||.||+|.+..++. .+|+|.++... ........+..|+.+++.++|+||+++++++.. ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 79 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAI-CTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYP 79 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCc-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCC
Confidence 3567889999999999999877665 68999887542 244556778889999999999999999997642 23
Q ss_pred eEEEEEecCCCCchhHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCc
Q 001902 739 HVCLITDYCPGGELFLLLDRQ----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 814 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~----~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a 814 (998)
..++||||+++++|.+++... ....+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 159 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLS 159 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcc
Confidence 578999999999999887421 2234889999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCC
Q 001902 815 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTP 893 (998)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~P 893 (998)
..+..... ........+++.|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus 160 ~~~~~~~~-------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p 214 (272)
T cd05075 160 KKIYNGDY-------------------------YRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTP 214 (272)
T ss_pred cccCcccc-------------------------eecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCC
Confidence 65421100 001122346778999999999999999999999999999998 8999
Q ss_pred CCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 894 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 894 f~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
|.+.........+..+.. .+.....+..+.++|.+||+.||.+||| +.+|++
T Consensus 215 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~l~~ 266 (272)
T cd05075 215 YPGVENSEIYDYLRQGNR-LKQPPDCLDGLYSLMSSCWLLNPKDRPS----FETLRC 266 (272)
T ss_pred CCCCCHHHHHHHHHcCCC-CCCCCCCCHHHHHHHHHHcCCCcccCcC----HHHHHH
Confidence 988877777666665432 2333456788999999999999999999 555554
No 307
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=2.5e-34 Score=311.41 Aligned_cols=254 Identities=27% Similarity=0.462 Sum_probs=217.9
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
+|++.+.||+|++|.||++.+..+++.|++|.+..... .......+.+|++++++++|+|++++++++...+..+++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKI-KEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE 79 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence 48889999999999999999988999999999986533 23456788899999999999999999999999999999999
Q ss_pred cCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCC
Q 001902 746 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 825 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 825 (998)
|+++++|.+++... ..+++..+..++.|++.||.|||++||+|+||+|+||+++.++.++|+|||++........
T Consensus 80 ~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--- 154 (254)
T cd06627 80 YAENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK--- 154 (254)
T ss_pred cCCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcc---
Confidence 99999999999765 4699999999999999999999999999999999999999999999999999855321110
Q ss_pred CcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001902 826 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 905 (998)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~ 905 (998)
......++..|+|||.+.+..++.++||||||+++|+|++|..||...........
T Consensus 155 ------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~ 210 (254)
T cd06627 155 ------------------------DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFR 210 (254)
T ss_pred ------------------------cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHH
Confidence 01234688899999999888888999999999999999999999988776655555
Q ss_pred HHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 906 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 906 i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
+...... +.....+..+.+++.+||..+|++||+ +.+++.||||
T Consensus 211 ~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~R~~----~~~~l~~~~~ 254 (254)
T cd06627 211 IVQDDHP-PLPEGISPELKDFLMQCFQKDPNLRPT----AKQLLKHPWI 254 (254)
T ss_pred HhccCCC-CCCCCCCHHHHHHHHHHHhCChhhCcC----HHHHhcCCCC
Confidence 5433222 223346789999999999999999999 9999999998
No 308
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.8e-34 Score=314.62 Aligned_cols=252 Identities=24% Similarity=0.364 Sum_probs=211.4
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEE
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 741 (998)
+..++|.+.+.||.|+||.||+|.+. .++.+|+|.+..... ....+.+|+.+++.++|+||+++++++......+
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 77 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM----SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIY 77 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc----CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceE
Confidence 55678999999999999999999975 457899999875432 2356788999999999999999999999989999
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 821 (998)
+||||+++++|.+++.......++...+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 78 ~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~ 157 (261)
T cd05034 78 IVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDE 157 (261)
T ss_pred EEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchh
Confidence 99999999999999987655679999999999999999999999999999999999999999999999999985432100
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCChH
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 900 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~ 900 (998)
........++..|+|||.+.+..++.++|||||||++|+|++ |+.||.+.+..
T Consensus 158 --------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~ 211 (261)
T cd05034 158 --------------------------YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR 211 (261)
T ss_pred --------------------------hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 000112234568999999998889999999999999999998 99999988877
Q ss_pred HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHH
Q 001902 901 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 949 (998)
Q Consensus 901 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL 949 (998)
..+..+... ...+.....+..+.+++.+||..+|.+||+ +.+++
T Consensus 212 ~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~----~~~l~ 255 (261)
T cd05034 212 EVLEQVERG-YRMPRPPNCPEELYDLMLQCWDKDPEERPT----FEYLQ 255 (261)
T ss_pred HHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcccCcccCCC----HHHHH
Confidence 777766543 333444445788999999999999999999 55544
No 309
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.2e-34 Score=324.36 Aligned_cols=257 Identities=21% Similarity=0.307 Sum_probs=206.7
Q ss_pred ccccCCcccccccCCCCceeEEEEEEcc-------CCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYA 732 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~-------~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~ 732 (998)
.+..++|.+.+.||+|+||.||++.+.. +...+|+|.+.... .......+..|+.+++.+ +|+||+++++
T Consensus 14 ~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~ 91 (307)
T cd05098 14 EVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLG 91 (307)
T ss_pred eeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEeeEEE
Confidence 4455789999999999999999998743 23579999987542 233456788899999999 7999999999
Q ss_pred EEeeCCeEEEEEecCCCCchhHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcE
Q 001902 733 SFQTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 798 (998)
Q Consensus 733 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NI 798 (998)
++...+..|+||||+++++|.+++.... ...++...+..++.||+.||+|||++|++||||||+||
T Consensus 92 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Ni 171 (307)
T cd05098 92 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNV 171 (307)
T ss_pred EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHhe
Confidence 9999999999999999999999997642 13488899999999999999999999999999999999
Q ss_pred EEecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHH
Q 001902 799 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 878 (998)
Q Consensus 799 Li~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIw 878 (998)
|++.++.++|+|||.+........ ........+++.|+|||++.+..++.++|||
T Consensus 172 ll~~~~~~kL~dfg~a~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw 226 (307)
T cd05098 172 LVTEDNVMKIADFGLARDIHHIDY-------------------------YKKTTNGRLPVKWMAPEALFDRIYTHQSDVW 226 (307)
T ss_pred EEcCCCcEEECCCcccccccccch-------------------------hhccccCCCccceeChHHhccCCCCcHHHHH
Confidence 999999999999999854321000 0001112345789999999988899999999
Q ss_pred HHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcH
Q 001902 879 ALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGA 945 (998)
Q Consensus 879 SlG~il~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a 945 (998)
||||++|+|++ |..||.+.........+... ...+.....+.++.+|+.+||..+|.+||++.+++
T Consensus 227 slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl 293 (307)
T cd05098 227 SFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG-HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 293 (307)
T ss_pred HHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcC-CCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHH
Confidence 99999999998 89999877665555554433 33333345688999999999999999999944443
No 310
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-36 Score=320.58 Aligned_cols=267 Identities=28% Similarity=0.468 Sum_probs=223.3
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccCh----hHHHHHHHHHHHHHhCCCCCccceeEEEe-eCC
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR----NKVHRACAEREILDMLDHPFVPALYASFQ-TKT 738 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~----~~~~~~~~E~~il~~l~h~nIv~l~~~~~-~~~ 738 (998)
.++|-++..||+|||+.||+|.+....++||+|+-........ +..+...+|..|.+.|+||.||++|++|. +.+
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd 541 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD 541 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence 4689999999999999999999999999999998764432222 22445678999999999999999999996 567
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC--CceeccCCCCcEEEec---CCcEEEEeccC
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ--GIIYRDLKPENVLLQG---NGHVSLTDFDL 813 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~--~IiHrDLkP~NILi~~---~g~vkL~DFG~ 813 (998)
.+|-|+|||+|.+|.-+|+.+ +.+++..++.|+.||+.||.||... .|||-||||.|||+.. -|.+||.|||+
T Consensus 542 sFCTVLEYceGNDLDFYLKQh--klmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGL 619 (775)
T KOG1151|consen 542 SFCTVLEYCEGNDLDFYLKQH--KLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGL 619 (775)
T ss_pred cceeeeeecCCCchhHHHHhh--hhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecch
Confidence 899999999999999999875 5699999999999999999999976 6999999999999974 46799999999
Q ss_pred ccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC----CCCChhHHHHHHHHHHHHHc
Q 001902 814 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA----GHTSAVDWWALGILLYEMLY 889 (998)
Q Consensus 814 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~----~~~~~sDIwSlG~il~eLlt 889 (998)
++.+..+... ........+...||.+|++||.+.-+ +.+.++||||+|+|+|.+++
T Consensus 620 SKIMdddSy~--------------------~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClY 679 (775)
T KOG1151|consen 620 SKIMDDDSYN--------------------SVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLY 679 (775)
T ss_pred hhhccCCccC--------------------cccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhc
Confidence 9998754321 11233455667899999999998543 46779999999999999999
Q ss_pred CCCCCCCCChH-HHH--HHHH-hCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 890 GYTPFRGKTRQ-KTF--ANIL-HKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 890 G~~Pf~~~~~~-~~~--~~i~-~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
|+.||...... +++ ..|+ ...+.||..+-.+.++++||++||.+.-++|.. +.+|..||||..
T Consensus 680 GrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~D----V~qLA~dpyllP 746 (775)
T KOG1151|consen 680 GRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRID----VQQLACDPYLLP 746 (775)
T ss_pred cCCCCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhh----HHHHccCccccc
Confidence 99999875432 222 2233 245788888889999999999999999999999 999999999987
No 311
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.8e-34 Score=321.39 Aligned_cols=249 Identities=22% Similarity=0.308 Sum_probs=204.1
Q ss_pred CCcccccccCCCCceeEEEEEEccCCe--EEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCeEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQ--YFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~--~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~ 741 (998)
++|++.+.||.|+||.||+|.+..++. .+++|.++.. ........+.+|+.++.++ +||||+++++++...+.+|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEF--ASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEcccc--CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 579999999999999999999877664 4688877632 2333456788899999999 7999999999999999999
Q ss_pred EEEecCCCCchhHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEE
Q 001902 742 LITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 807 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vk 807 (998)
+||||+++++|.+++.... ...++...++.++.||+.||+|||++||+||||||+|||++.++.+|
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~k 159 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASK 159 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEE
Confidence 9999999999999997532 13488899999999999999999999999999999999999999999
Q ss_pred EEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHH
Q 001902 808 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 887 (998)
Q Consensus 808 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eL 887 (998)
|+|||++...... ........+..|+|||++.+..++.++|||||||++|+|
T Consensus 160 l~dfg~~~~~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el 211 (297)
T cd05089 160 IADFGLSRGEEVY----------------------------VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEI 211 (297)
T ss_pred ECCcCCCccccce----------------------------eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHH
Confidence 9999987421100 001111235579999999988899999999999999999
Q ss_pred Hc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhc
Q 001902 888 LY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 944 (998)
Q Consensus 888 lt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 944 (998)
++ |..||.+.........+... ...+....++..+.+|+.+||..+|.+||++.++
T Consensus 212 ~t~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i 268 (297)
T cd05089 212 VSLGGTPYCGMTCAELYEKLPQG-YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQI 268 (297)
T ss_pred HcCCCCCCCCCCHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 97 99999988877777666554 2223334578899999999999999999994443
No 312
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.4e-34 Score=322.08 Aligned_cols=254 Identities=24% Similarity=0.327 Sum_probs=203.2
Q ss_pred cCCcccccccCCCCceeEEEEEEccC--------------CeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccc
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGS--------------GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPA 729 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~--------------~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~ 729 (998)
.++|++.+.||+|+||.||+|.+..+ ...||+|.++... .......+.+|++++++++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~ 81 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRLKNPNIIR 81 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCcCe
Confidence 46899999999999999999987543 3358999987542 2344567889999999999999999
Q ss_pred eeEEEeeCCeEEEEEecCCCCchhHHHhhCC----------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEE
Q 001902 730 LYASFQTKTHVCLITDYCPGGELFLLLDRQP----------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVL 799 (998)
Q Consensus 730 l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~----------~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NIL 799 (998)
+++++...+..|+||||+++++|.+++.... ...++...+..++.||+.||+|||++|++|+||||+||+
T Consensus 82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil 161 (295)
T cd05097 82 LLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCL 161 (295)
T ss_pred EEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEE
Confidence 9999999999999999999999999986531 123678889999999999999999999999999999999
Q ss_pred EecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHH
Q 001902 800 LQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWA 879 (998)
Q Consensus 800 i~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwS 879 (998)
++.++.+||+|||++....... .........++..|+|||++.+..++.++||||
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwS 216 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGD-------------------------YYRIQGRAVLPIRWMAWESILLGKFTTASDVWA 216 (295)
T ss_pred EcCCCcEEecccccccccccCc-------------------------ceeccCcCcCceeecChhhhccCCcCchhhHHH
Confidence 9999999999999985432110 001112334678899999999888999999999
Q ss_pred HHHHHHHHHc--CCCCCCCCChHHHHHHHHh-----CC-CCCCCCCCCcHHHHHHHHHccccCccCcCCChhc
Q 001902 880 LGILLYEMLY--GYTPFRGKTRQKTFANILH-----KD-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 944 (998)
Q Consensus 880 lG~il~eLlt--G~~Pf~~~~~~~~~~~i~~-----~~-~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 944 (998)
|||++|+|++ |..||...+.......+.. .. .........+..+.+|+.+||..||.+||++.++
T Consensus 217 lG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i 289 (295)
T cd05097 217 FGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKI 289 (295)
T ss_pred HHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHH
Confidence 9999999987 7789988766655544432 11 1122233467889999999999999999994443
No 313
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1.4e-34 Score=319.53 Aligned_cols=255 Identities=27% Similarity=0.436 Sum_probs=209.6
Q ss_pred cccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC--CeEEEEE
Q 001902 667 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THVCLIT 744 (998)
Q Consensus 667 y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~~~~lV~ 744 (998)
|++++.||.|++|.||+|.+..+++.+|+|.+.... ........+.+|+.+++.++|+|++++++++... ...++||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEe
Confidence 678899999999999999999899999999998653 2333445677899999999999999999999887 8999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||++ ++|.+++.... ..+++..++.++.||+.||+|||+.|++|+||+|+||+++.++.++|+|||++........
T Consensus 80 e~~~-~~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~-- 155 (287)
T cd07840 80 EYMD-HDLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS-- 155 (287)
T ss_pred cccc-ccHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc--
Confidence 9996 58888886542 4699999999999999999999999999999999999999999999999999855331110
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 903 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~ 903 (998)
.......++..|+|||.+.+ ..++.++|||||||++|+|++|..||...+....+
T Consensus 156 ------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~ 211 (287)
T cd07840 156 ------------------------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQL 211 (287)
T ss_pred ------------------------ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence 01122356889999998765 45788999999999999999999999888776665
Q ss_pred HHHHhCCC-----CCCCC-----------------------CC-CcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 904 ANILHKDL-----KFPSS-----------------------TP-TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 904 ~~i~~~~~-----~~~~~-----------------------~~-~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
..+..... .++.. .. .+..+.+++.+||..+|.+||+ +.++++||||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~----~~~~l~~~~~ 287 (287)
T cd07840 212 EKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRIS----ADQALQHEYF 287 (287)
T ss_pred HHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcC----HHHHhhCcCC
Confidence 55543110 00000 11 2778899999999999999999 9999999998
No 314
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.2e-34 Score=329.65 Aligned_cols=259 Identities=25% Similarity=0.373 Sum_probs=204.9
Q ss_pred cccCCcccccccCCCCceeEEEEEE-----ccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEe
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVEL-----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQ 735 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~-----~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~ 735 (998)
+..++|++.+.||.|+||.||+|.+ ..+++.||+|+++... .......+.+|+.++..+ +|+||+++++++.
T Consensus 4 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 81 (343)
T cd05103 4 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACT 81 (343)
T ss_pred cchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC--ChHHHHHHHHHHHHHHhccCCccHhhhcceee
Confidence 3456899999999999999999985 3467899999987542 233456788899999999 6899999999876
Q ss_pred e-CCeEEEEEecCCCCchhHHHhhCC------------------------------------------------------
Q 001902 736 T-KTHVCLITDYCPGGELFLLLDRQP------------------------------------------------------ 760 (998)
Q Consensus 736 ~-~~~~~lV~E~~~ggsL~~~l~~~~------------------------------------------------------ 760 (998)
. ...+++|||||++|+|.+++....
T Consensus 82 ~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (343)
T cd05103 82 KPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV 161 (343)
T ss_pred cCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence 4 457899999999999999986431
Q ss_pred -----------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcch
Q 001902 761 -----------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 829 (998)
Q Consensus 761 -----------~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 829 (998)
...++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~------ 235 (343)
T cd05103 162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY------ 235 (343)
T ss_pred hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcch------
Confidence 123677888999999999999999999999999999999999999999999998543211100
Q ss_pred hhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHh
Q 001902 830 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILH 908 (998)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~~~~~~i~~ 908 (998)
.......+++.|+|||++.+..++.++|||||||++|+|++ |..||........+...+.
T Consensus 236 -------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~ 296 (343)
T cd05103 236 -------------------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 296 (343)
T ss_pred -------------------hhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHh
Confidence 01112345678999999988889999999999999999996 9999987654444444343
Q ss_pred CCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 909 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 909 ~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
.....+.....+..+.+++..||+.||.+||+ +.+|++|
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps----~~eil~~ 335 (343)
T cd05103 297 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT----FSELVEH 335 (343)
T ss_pred ccCCCCCCCCCCHHHHHHHHHHccCChhhCcC----HHHHHHH
Confidence 33333333346778999999999999999999 7777765
No 315
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=6e-35 Score=318.71 Aligned_cols=250 Identities=30% Similarity=0.448 Sum_probs=203.0
Q ss_pred ccccccCCCCceeEEEEEEc----cCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 668 RPIKPLGSGDTGSVHLVELC----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 668 ~~~~~LG~G~~g~Vy~a~~~----~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.+.+.||.|.||.||+|.+. ..+..|+||.++.. ........+.+|++++++++||||+++++++...+..++|
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv 79 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS--SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLV 79 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT--SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc--cccccceeeeeccccccccccccccccccccccccccccc
Confidence 35678999999999999997 34678999999642 2344578889999999999999999999999988889999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
|||+++|+|.+++.......++...+..++.||+.||.|||+++++|++|+|+|||++.++.+||+|||++........
T Consensus 80 ~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~- 158 (259)
T PF07714_consen 80 MEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK- 158 (259)
T ss_dssp EE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS-
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence 9999999999999886456699999999999999999999999999999999999999999999999999855421100
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCChHHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKT 902 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~~~ 902 (998)
........+...|+|||.+....++.++||||||+++|||++ |..||...+....
T Consensus 159 ------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~ 214 (259)
T PF07714_consen 159 ------------------------YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEI 214 (259)
T ss_dssp ------------------------EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHH
T ss_pred ------------------------cccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 011223346788999999998889999999999999999999 7899999888887
Q ss_pred HHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHH
Q 001902 903 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 949 (998)
Q Consensus 903 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL 949 (998)
...+.... ..+....++..+.++|..||..||.+||+ +.+|+
T Consensus 215 ~~~~~~~~-~~~~~~~~~~~~~~li~~C~~~~p~~RPs----~~~i~ 256 (259)
T PF07714_consen 215 IEKLKQGQ-RLPIPDNCPKDIYSLIQQCWSHDPEKRPS----FQEIL 256 (259)
T ss_dssp HHHHHTTE-ETTSBTTSBHHHHHHHHHHT-SSGGGS------HHHHH
T ss_pred cccccccc-cceeccchhHHHHHHHHHHcCCChhhCcC----HHHHH
Confidence 77774443 33344457889999999999999999999 55554
No 316
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2e-34 Score=316.02 Aligned_cols=257 Identities=23% Similarity=0.324 Sum_probs=210.7
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCe---EEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQ---YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~---~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
...|++.+.||+|+||.||+|.+..+++ .||+|++.... .......+..|+.+++.++||||+++++++..+...
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 80 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPV 80 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCce
Confidence 4578999999999999999999877664 69999987532 344567788999999999999999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
++||||+++++|.+++.... ..++...++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 159 (269)
T cd05065 81 MIITEFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 159 (269)
T ss_pred EEEEecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccC
Confidence 99999999999999987653 45899999999999999999999999999999999999999999999999998554211
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCCh
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 899 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~ 899 (998)
.... .........++..|+|||++.+..++.++|||||||++|+|++ |..||...+.
T Consensus 160 ~~~~----------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~ 217 (269)
T cd05065 160 TSDP----------------------TYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 217 (269)
T ss_pred cccc----------------------ccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH
Confidence 1000 0000011112467999999998899999999999999999886 9999998877
Q ss_pred HHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 900 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 900 ~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
......+.. ....+....++..+.+++.+||..+|.+||+ +.+++.
T Consensus 218 ~~~~~~i~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~i~~ 263 (269)
T cd05065 218 QDVINAIEQ-DYRLPPPMDCPTALHQLMLDCWQKDRNARPK----FGQIVS 263 (269)
T ss_pred HHHHHHHHc-CCcCCCcccCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence 776666643 3444545567888999999999999999999 556553
No 317
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=8.6e-35 Score=330.97 Aligned_cols=255 Identities=27% Similarity=0.439 Sum_probs=212.0
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCe----
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH---- 739 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~---- 739 (998)
.++|.+.+.||+|++|.||+|.+..+++.||+|++.... ........+.+|+.+++.++|+||+++++++...+.
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPF-QSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEeccccc-chhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 468999999999999999999999999999999887542 223344667789999999999999999988866554
Q ss_pred --EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 740 --VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 740 --~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
.|+|+||+ +++|.+++.. ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++...
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~ 168 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHT 168 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEccccccccc
Confidence 89999999 7799998865 35899999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 896 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~ 896 (998)
.. ......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+
T Consensus 169 ~~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~ 218 (343)
T cd07851 169 DD------------------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPG 218 (343)
T ss_pred cc------------------------------cccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 20 0123357889999999865 4678899999999999999999999988
Q ss_pred CChHHHHHHHHhCCCCCC-----------------------------CCCCCcHHHHHHHHHccccCccCcCCChhcHHH
Q 001902 897 KTRQKTFANILHKDLKFP-----------------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 947 (998)
Q Consensus 897 ~~~~~~~~~i~~~~~~~~-----------------------------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~e 947 (998)
.+....+..+.......+ .....+..+.+||.+||..||.+||| +.+
T Consensus 219 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt----~~e 294 (343)
T cd07851 219 SDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRIT----AAE 294 (343)
T ss_pred CChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCC----HHH
Confidence 777666655543211000 01234788999999999999999999 999
Q ss_pred HHcCCCccCC
Q 001902 948 IKKHPFFKGV 957 (998)
Q Consensus 948 lL~Hp~f~~~ 957 (998)
|++||||+..
T Consensus 295 ll~h~~~~~~ 304 (343)
T cd07851 295 ALAHPYLAEY 304 (343)
T ss_pred HhcCCCcccc
Confidence 9999999964
No 318
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=2.8e-34 Score=312.62 Aligned_cols=248 Identities=22% Similarity=0.324 Sum_probs=201.3
Q ss_pred cccCCCCceeEEEEEEccCC---eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEecC
Q 001902 671 KPLGSGDTGSVHLVELCGSG---QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYC 747 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~~~---~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~ 747 (998)
+.||+|+||.||+|.+..++ ..+|+|.+...... .....+.+|+.+++.++|+||+++++++. .+..++||||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~ 77 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELA 77 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeC
Confidence 46899999999999875544 78999998865432 34567888999999999999999999776 45689999999
Q ss_pred CCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCc
Q 001902 748 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 827 (998)
Q Consensus 748 ~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~ 827 (998)
++++|.+++.... .+++..+..++.|++.||+|||..+++|+||||+|||++.++.+||+|||++.........
T Consensus 78 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~---- 151 (257)
T cd05060 78 PLGPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY---- 151 (257)
T ss_pred CCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcc----
Confidence 9999999998753 5899999999999999999999999999999999999999999999999998654211100
Q ss_pred chhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHH
Q 001902 828 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANI 906 (998)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~~~~~~i 906 (998)
........++..|+|||.+.+..++.++|||||||++|+|++ |.+||...+.......+
T Consensus 152 --------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~ 211 (257)
T cd05060 152 --------------------YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAML 211 (257)
T ss_pred --------------------cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH
Confidence 001111234568999999998899999999999999999997 99999888776666655
Q ss_pred HhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHH
Q 001902 907 LHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 948 (998)
Q Consensus 907 ~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~el 948 (998)
.... ..+.....+..+.+|+.+||..+|.+||++.+++..+
T Consensus 212 ~~~~-~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l 252 (257)
T cd05060 212 ESGE-RLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTF 252 (257)
T ss_pred HcCC-cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHH
Confidence 4432 3344455778999999999999999999955544433
No 319
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.9e-34 Score=316.85 Aligned_cols=252 Identities=20% Similarity=0.293 Sum_probs=201.5
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCe----EEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 737 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~----~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~ 737 (998)
+..++|++++.||.|+||.||+|.+..++. .+++|.+... ........+..|+.+++.++||||+++++++. .
T Consensus 4 ~~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~ 80 (279)
T cd05111 4 LKETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR--SGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-G 80 (279)
T ss_pred CCHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc--cchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-C
Confidence 345689999999999999999999877776 4666766432 12234456777888999999999999999875 4
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
...+++|||+++++|.+++.... ..+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||++...
T Consensus 81 ~~~~~i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 81 ASLQLVTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLL 159 (279)
T ss_pred CccEEEEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceec
Confidence 56789999999999999997643 45899999999999999999999999999999999999999999999999998643
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 896 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~ 896 (998)
..... ........++..|+|||++.+..++.++|||||||++|+|++ |..||.+
T Consensus 160 ~~~~~-------------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~ 214 (279)
T cd05111 160 YPDDK-------------------------KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAG 214 (279)
T ss_pred cCCCc-------------------------ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCC
Confidence 21110 001123457778999999998889999999999999999998 9999988
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChh
Q 001902 897 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 943 (998)
Q Consensus 897 ~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 943 (998)
.........+..+ ...+....++..+.+++.+||..||.+||++.+
T Consensus 215 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~e 260 (279)
T cd05111 215 MRPHEVPDLLEKG-ERLAQPQICTIDVYMVMVKCWMIDENVRPTFKE 260 (279)
T ss_pred CCHHHHHHHHHCC-CcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHH
Confidence 7765544444333 333333446778899999999999999999443
No 320
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=2.4e-34 Score=318.77 Aligned_cols=254 Identities=21% Similarity=0.296 Sum_probs=208.1
Q ss_pred ccCCcccccccCCCCceeEEEEEEcc-----CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 737 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~~-----~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~ 737 (998)
..++|++.+.||.|+||.||+|.+.. ++..+|+|++.... .......+.+|+.+++.++||||+++++++...
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~ 80 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDHPNIVKLLGVCAVG 80 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc--CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCC
Confidence 35689999999999999999999743 67899999987542 234456788899999999999999999999999
Q ss_pred CeEEEEEecCCCCchhHHHhhCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCc
Q 001902 738 THVCLITDYCPGGELFLLLDRQP--------------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 797 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~--------------------~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~N 797 (998)
...|+||||+++++|.+++.... ...+++..+..++.||+.||.|||++|++||||||+|
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~n 160 (288)
T cd05050 81 KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRN 160 (288)
T ss_pred CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhh
Confidence 99999999999999999997431 1247788899999999999999999999999999999
Q ss_pred EEEecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHH
Q 001902 798 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 877 (998)
Q Consensus 798 ILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDI 877 (998)
|+++.++.++|+|||++........ ........++..|+|||++.+..++.++||
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 215 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADY-------------------------YKASENDAIPIRWMPPESIFYNRYTTESDV 215 (288)
T ss_pred eEecCCCceEECccccceecccCcc-------------------------ccccCCCccChhhcCHHHHhcCCCCchhHH
Confidence 9999999999999998854321100 011112234667999999998899999999
Q ss_pred HHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhc
Q 001902 878 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 944 (998)
Q Consensus 878 wSlG~il~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 944 (998)
|||||++|+|++ |..||.+.+..+....+...... +.....+..+.+|+.+||+.+|.+|||+.++
T Consensus 216 ~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el 282 (288)
T cd05050 216 WAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNVL-SCPDNCPLELYNLMRLCWSKLPSDRPSFASI 282 (288)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCC-CCCCCCCHHHHHHHHHHcccCcccCCCHHHH
Confidence 999999999997 88999888777777666655432 2233467899999999999999999994443
No 321
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=1.9e-34 Score=326.95 Aligned_cols=273 Identities=25% Similarity=0.333 Sum_probs=212.8
Q ss_pred CCccc-ccccCCCCceeEEEEEEccCCeEEEEEEeecccccChh-----------HHHHHHHHHHHHHhCCCCCccceeE
Q 001902 665 QHFRP-IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN-----------KVHRACAEREILDMLDHPFVPALYA 732 (998)
Q Consensus 665 ~~y~~-~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~-----------~~~~~~~E~~il~~l~h~nIv~l~~ 732 (998)
++|.. .+.||.|+||.||+|.+..+++.||+|+++........ ....+.+|+.+++.++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 46654 47799999999999999999999999998754322210 0124678999999999999999999
Q ss_pred EEeeCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEecc
Q 001902 733 SFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFD 812 (998)
Q Consensus 733 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG 812 (998)
++...+..|+||||+. ++|.+++... ..+++..+..++.||+.||.|||++||+|+||+|+||+++.++.++|+|||
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg 164 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRK--IRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFG 164 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCcc
Confidence 9999999999999995 6899988764 458999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCC
Q 001902 813 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGY 891 (998)
Q Consensus 813 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~ 891 (998)
++.............. .. ............+++.|+|||.+.+. .++.++|||||||++|+|++|.
T Consensus 165 ~~~~~~~~~~~~~~~~---------~~----~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~ 231 (335)
T PTZ00024 165 LARRYGYPPYSDTLSK---------DE----TMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGK 231 (335)
T ss_pred ceeecccccccccccc---------cc----cccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 9865432211100000 00 00001112234578899999998764 4688999999999999999999
Q ss_pred CCCCCCChHHHHHHHHhCCC-----CCCC---------------------CCCCcHHHHHHHHHccccCccCcCCChhcH
Q 001902 892 TPFRGKTRQKTFANILHKDL-----KFPS---------------------STPTSLHAKQLMYRLLHRDPKSRLGSHEGA 945 (998)
Q Consensus 892 ~Pf~~~~~~~~~~~i~~~~~-----~~~~---------------------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a 945 (998)
+||.+.+....+..+..... .++. ....+..+.+||.+||..+|++||+ +
T Consensus 232 ~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s----~ 307 (335)
T PTZ00024 232 PLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERIS----A 307 (335)
T ss_pred CCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccC----H
Confidence 99998887766655543110 0000 1234677899999999999999999 9
Q ss_pred HHHHcCCCccCC
Q 001902 946 NEIKKHPFFKGV 957 (998)
Q Consensus 946 ~elL~Hp~f~~~ 957 (998)
.++|.||||+..
T Consensus 308 ~~~l~~~~~~~~ 319 (335)
T PTZ00024 308 KEALKHEYFKSD 319 (335)
T ss_pred HHHhcCcccCCC
Confidence 999999999975
No 322
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.9e-34 Score=317.10 Aligned_cols=256 Identities=21% Similarity=0.315 Sum_probs=214.1
Q ss_pred cCCcccccccCCCCceeEEEEEEcc-----CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 738 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~-----~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 738 (998)
..+|++++.||.|+||.||+|..+. +.+.+++|.+.... .......+.+|+.++++++|+||+++++++...+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 81 (275)
T cd05046 4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK--DENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE 81 (275)
T ss_pred hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc--chHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC
Confidence 4689999999999999999999753 35689999876431 2234567889999999999999999999999999
Q ss_pred eEEEEEecCCCCchhHHHhhCCC-------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEec
Q 001902 739 HVCLITDYCPGGELFLLLDRQPT-------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 811 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~-------~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DF 811 (998)
..|+||||+++++|.+++..... ..+++..+..++.||+.||+|||++||+|+||||+||+++.++.++|+||
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 82 PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEccc
Confidence 99999999999999999976531 15899999999999999999999999999999999999999999999999
Q ss_pred cCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-C
Q 001902 812 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-G 890 (998)
Q Consensus 812 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G 890 (998)
|++....... ........++..|+|||.+.+..++.++||||||+++|+|++ |
T Consensus 162 ~~~~~~~~~~--------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~ 215 (275)
T cd05046 162 SLSKDVYNSE--------------------------YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQG 215 (275)
T ss_pred ccccccCccc--------------------------ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCC
Confidence 9874321000 011123356778999999988888999999999999999998 8
Q ss_pred CCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 891 YTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 891 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
..||........+..+......++.....+..+.+++.+||..+|.+||+ +.+++.+
T Consensus 216 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~----~~~~l~~ 272 (275)
T cd05046 216 ELPFYGLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPS----FSELVSA 272 (275)
T ss_pred CCCccccchHHHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCC----HHHHHHH
Confidence 89998877777777776666666666667889999999999999999999 7776653
No 323
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.7e-34 Score=321.14 Aligned_cols=257 Identities=21% Similarity=0.305 Sum_probs=208.8
Q ss_pred ccccCCcccccccCCCCceeEEEEEEc-------cCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELC-------GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYA 732 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~-------~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~ 732 (998)
.+..++|.+.+.||+|+||.||+|.+. ..+..+|+|.+.... .......+.+|+.+++.+ +||||+++++
T Consensus 11 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~ 88 (304)
T cd05101 11 EFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLG 88 (304)
T ss_pred cccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchheeE
Confidence 455678999999999999999999853 235589999887532 233456788999999999 8999999999
Q ss_pred EEeeCCeEEEEEecCCCCchhHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcE
Q 001902 733 SFQTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 798 (998)
Q Consensus 733 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NI 798 (998)
++...+.+|+||||+++++|.+++.... ...++...+..++.||+.||.|||++||+||||||+||
T Consensus 89 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni 168 (304)
T cd05101 89 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNV 168 (304)
T ss_pred EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceE
Confidence 9999999999999999999999997642 13477888999999999999999999999999999999
Q ss_pred EEecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHH
Q 001902 799 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 878 (998)
Q Consensus 799 Li~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIw 878 (998)
+++.++.+||+|||++........ ........+++.|+|||++.+..++.++|||
T Consensus 169 li~~~~~~kl~D~g~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 223 (304)
T cd05101 169 LVTENNVMKIADFGLARDVNNIDY-------------------------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 223 (304)
T ss_pred EEcCCCcEEECCCccceecccccc-------------------------cccccCCCCCceeeCchhhccCCCCchhhHH
Confidence 999999999999999865431110 0011223456789999999988899999999
Q ss_pred HHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcH
Q 001902 879 ALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGA 945 (998)
Q Consensus 879 SlG~il~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a 945 (998)
||||++|+|++ |..||.+.........+.... .......++..+.+|+.+||..+|.+||++.+++
T Consensus 224 slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l 290 (304)
T cd05101 224 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH-RMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLV 290 (304)
T ss_pred HHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC-cCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHH
Confidence 99999999998 889998887777666654432 2233345788999999999999999999944443
No 324
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.6e-34 Score=322.26 Aligned_cols=259 Identities=25% Similarity=0.351 Sum_probs=209.0
Q ss_pred ccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC----
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT---- 738 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~---- 738 (998)
..++|++.+.||+|+||.||+|.+..+|+.||+|.++.... .......+.+|+.+++.++||||+++++++....
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNE-KEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccc-ccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 35689999999999999999999999999999999875432 2223346678999999999999999999887654
Q ss_pred ------eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEecc
Q 001902 739 ------HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFD 812 (998)
Q Consensus 739 ------~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG 812 (998)
.+|+||||+++ +|..++... ...+++..++.++.||+.||+|||+.||+|+||||+||+++.++.+||+|||
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg 161 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFG 161 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCccc
Confidence 89999999965 777777654 3458999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCC
Q 001902 813 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGY 891 (998)
Q Consensus 813 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~ 891 (998)
++........ .......++..|+|||.+.+ ..++.++|||||||++|+|++|+
T Consensus 162 ~~~~~~~~~~--------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~ 215 (302)
T cd07864 162 LARLYNSEES--------------------------RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKK 215 (302)
T ss_pred ccccccCCcc--------------------------cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCC
Confidence 9855321110 01122346788999998865 45688999999999999999999
Q ss_pred CCCCCCChHHHHHHHHhCC---CC--CC-----------------------CCCCCcHHHHHHHHHccccCccCcCCChh
Q 001902 892 TPFRGKTRQKTFANILHKD---LK--FP-----------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHE 943 (998)
Q Consensus 892 ~Pf~~~~~~~~~~~i~~~~---~~--~~-----------------------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 943 (998)
+||...+....+..+.... .+ ++ .....+..+.+|+.+||..||.+||+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~--- 292 (302)
T cd07864 216 PIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCT--- 292 (302)
T ss_pred CCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCC---
Confidence 9998877666555544310 00 00 11235778999999999999999999
Q ss_pred cHHHHHcCCCc
Q 001902 944 GANEIKKHPFF 954 (998)
Q Consensus 944 ~a~elL~Hp~f 954 (998)
+.+++.||||
T Consensus 293 -~~~il~~~~~ 302 (302)
T cd07864 293 -AEEALNSPWL 302 (302)
T ss_pred -HHHHhcCCCC
Confidence 9999999997
No 325
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.5e-34 Score=323.69 Aligned_cols=268 Identities=26% Similarity=0.375 Sum_probs=208.7
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC------
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 737 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------ 737 (998)
.++|.+.+.||+|+||.||+|.+..+++.+|+|.+......+. ......+|+++++.++|+||+++++++...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDG-FPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCC-cchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 5789999999999999999999999999999999875432221 223556899999999999999999887433
Q ss_pred --CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcc
Q 001902 738 --THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 815 (998)
Q Consensus 738 --~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~ 815 (998)
..+++||||+. ++|...+... ...+++..++.++.||++||.|||++||+|+||||+||+++.++.++|+|||++.
T Consensus 86 ~~~~~~lv~~~~~-~~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 163 (311)
T cd07866 86 KRGSVYMVTPYMD-HDLSGLLENP-SVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLAR 163 (311)
T ss_pred cCceEEEEEecCC-cCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccch
Confidence 35799999995 5677766543 3469999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCCC
Q 001902 816 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPF 894 (998)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf 894 (998)
.......... ..............|++.|+|||.+.+. .++.++|||||||++|+|++|.+||
T Consensus 164 ~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~ 227 (311)
T cd07866 164 PYDGPPPNPK----------------GGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPIL 227 (311)
T ss_pred hccCCCcccc----------------cCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCC
Confidence 5432111000 0000011223456789999999998654 5788999999999999999999999
Q ss_pred CCCChHHHHHHHHhCCCC-----------------------CC-----CCCCCcHHHHHHHHHccccCccCcCCChhcHH
Q 001902 895 RGKTRQKTFANILHKDLK-----------------------FP-----SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 946 (998)
Q Consensus 895 ~~~~~~~~~~~i~~~~~~-----------------------~~-----~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~ 946 (998)
.+.+.......+...... .+ .....+..+.+||.+||..||.+||| +.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t----~~ 303 (311)
T cd07866 228 QGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLT----AS 303 (311)
T ss_pred CCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcC----HH
Confidence 988776655554431000 00 00123457889999999999999999 99
Q ss_pred HHHcCCCc
Q 001902 947 EIKKHPFF 954 (998)
Q Consensus 947 elL~Hp~f 954 (998)
+++.||||
T Consensus 304 ell~~~~f 311 (311)
T cd07866 304 DALEHPYF 311 (311)
T ss_pred HHhcCCCC
Confidence 99999998
No 326
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.2e-34 Score=319.58 Aligned_cols=254 Identities=28% Similarity=0.499 Sum_probs=210.9
Q ss_pred cccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEec
Q 001902 667 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 746 (998)
Q Consensus 667 y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~ 746 (998)
|++.+.||.|++|.||+|.+..+++.+++|.+..... .......+..|+.+++.++|+||+++++++...+.+++||||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE-SEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccc-cchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEec
Confidence 6788999999999999999988999999999876432 223456778899999999999999999999999999999999
Q ss_pred CCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCC
Q 001902 747 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 826 (998)
Q Consensus 747 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~ 826 (998)
++ ++|.+++.... ..+++..+..++.||+.||.|||+.||+|+||||+||+++.++.++|+|||.+.......
T Consensus 80 ~~-~~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~----- 152 (283)
T cd05118 80 MD-TDLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV----- 152 (283)
T ss_pred cC-CCHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-----
Confidence 96 48888876643 468999999999999999999999999999999999999999999999999885543111
Q ss_pred cchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001902 827 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 905 (998)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~ 905 (998)
.......++..|+|||.+.+. .++.++|+||||+++|+|++|+.||.+.+..+.+..
T Consensus 153 ----------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~ 210 (283)
T cd05118 153 ----------------------RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFK 210 (283)
T ss_pred ----------------------ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 011234578899999999876 788999999999999999999999988877665555
Q ss_pred HHhCC-------------------CCCCC---------CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 906 ILHKD-------------------LKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 906 i~~~~-------------------~~~~~---------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
+.... ..++. ....+.++.+||.+||..||.+||+ +.++++||||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~----~~~ll~~~~~ 283 (283)
T cd05118 211 IFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRIT----AEQALAHPYF 283 (283)
T ss_pred HHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcC----HHHHhhCCCC
Confidence 43210 00000 1235678999999999999999999 9999999997
No 327
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=3.2e-34 Score=314.05 Aligned_cols=254 Identities=22% Similarity=0.301 Sum_probs=208.8
Q ss_pred ccCCcccccccCCCCceeEEEEEEccCCe---EEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCe
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELCGSGQ---YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 739 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~---~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 739 (998)
..+.|...+.||+|+||.||+|.+..++. .+++|.+.... .......+.+|+++++.++|+||+++++++...+.
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (268)
T cd05063 3 HPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKP 80 (268)
T ss_pred ChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCC
Confidence 34678899999999999999999876554 79999886542 23345678889999999999999999999999999
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCC
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 819 (998)
.|+||||+++++|.+++.... ..++...+..++.|++.||+|||+.|++|+||||+||+++.++.++|+|||++.....
T Consensus 81 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 81 AMIITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLED 159 (268)
T ss_pred cEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceeccc
Confidence 999999999999999997643 4589999999999999999999999999999999999999999999999999854321
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCC
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 898 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~ 898 (998)
.... .........+..|+|||++.+..++.++|||||||++|+|++ |..||...+
T Consensus 160 ~~~~------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~ 215 (268)
T cd05063 160 DPEG------------------------TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMS 215 (268)
T ss_pred cccc------------------------ceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCC
Confidence 1100 000111223567999999988889999999999999999997 999998877
Q ss_pred hHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhc
Q 001902 899 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 944 (998)
Q Consensus 899 ~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 944 (998)
.......+... ...+.....+..+.+|+.+||..+|.+||++.++
T Consensus 216 ~~~~~~~i~~~-~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i 260 (268)
T cd05063 216 NHEVMKAINDG-FRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDI 260 (268)
T ss_pred HHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHH
Confidence 76666666543 3445555678899999999999999999994443
No 328
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=3.6e-34 Score=312.44 Aligned_cols=250 Identities=22% Similarity=0.331 Sum_probs=207.1
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
.+..++|++.+.||+|+||.||++.+. .+..+++|.+... ......+.+|+.+++.++|+||+++++++.. ...
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~ 75 (260)
T cd05073 2 EIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPG----SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPI 75 (260)
T ss_pred cccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCC----hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCe
Confidence 355689999999999999999999864 4567999988753 2234678889999999999999999999887 778
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
+++|||+++++|.+++.+.....++...+..++.||+.||.|||+.|++|+||||+||+++.++.++|+|||.+......
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 155 (260)
T cd05073 76 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN 155 (260)
T ss_pred EEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCC
Confidence 99999999999999998765566889999999999999999999999999999999999999999999999988543210
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCCh
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 899 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~ 899 (998)
. ........++..|+|||++....++.++|+|||||++|++++ |..||.+.+.
T Consensus 156 ~--------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~ 209 (260)
T cd05073 156 E--------------------------YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 209 (260)
T ss_pred C--------------------------cccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH
Confidence 0 001112235678999999988889999999999999999998 9999998777
Q ss_pred HHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChh
Q 001902 900 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 943 (998)
Q Consensus 900 ~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 943 (998)
......+... ...+.....+.++.+++.+||+.+|++||++.+
T Consensus 210 ~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ 252 (260)
T cd05073 210 PEVIRALERG-YRMPRPENCPEELYNIMMRCWKNRPEERPTFEY 252 (260)
T ss_pred HHHHHHHhCC-CCCCCcccCCHHHHHHHHHHcccCcccCcCHHH
Confidence 6666555443 334444567889999999999999999999443
No 329
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=2e-34 Score=327.14 Aligned_cols=265 Identities=28% Similarity=0.422 Sum_probs=211.4
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeC--CeE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK--THV 740 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~--~~~ 740 (998)
.++|++.+.||+|+||.||+|.+..+++.+|+|.+.... ........+..|+.+++++ +|+||+++++++... ...
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAF-RNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeecccc-CcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 468999999999999999999998899999999886532 2233345677899999999 999999999988643 468
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
|+||||++ ++|..++... .+++..++.++.||+.||+|||++||+|+||||+||+++.++.+||+|||++......
T Consensus 85 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~ 160 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSEL 160 (337)
T ss_pred EEEecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccc
Confidence 99999995 5999888653 5888999999999999999999999999999999999999999999999998654311
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCCCCh
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 899 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~ 899 (998)
... ..........|+..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+...
T Consensus 161 ~~~----------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~ 218 (337)
T cd07852 161 EEN----------------------PENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTST 218 (337)
T ss_pred ccc----------------------ccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCCh
Confidence 100 00112234568999999998865 4578899999999999999999999987665
Q ss_pred HHHHHHHHhCCCC----------------------------C-CCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 900 QKTFANILHKDLK----------------------------F-PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 900 ~~~~~~i~~~~~~----------------------------~-~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
......+...... . ......+.++.+||.+||+.||++||| +.++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps----~~~il~ 294 (337)
T cd07852 219 LNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLT----AEEALE 294 (337)
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccC----HHHHhh
Confidence 5444433221100 0 011225778999999999999999999 999999
Q ss_pred CCCccCCCh
Q 001902 951 HPFFKGVNW 959 (998)
Q Consensus 951 Hp~f~~~~~ 959 (998)
||||+.++-
T Consensus 295 ~~~~~~~~~ 303 (337)
T cd07852 295 HPYVAQFHN 303 (337)
T ss_pred Chhhhhhcc
Confidence 999998633
No 330
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=3.1e-34 Score=319.36 Aligned_cols=256 Identities=25% Similarity=0.354 Sum_probs=204.0
Q ss_pred cCCcccccccCCCCceeEEEEEEcc----------------CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCc
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCG----------------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFV 727 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~----------------~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nI 727 (998)
.++|++.+.||+|+||.||+|.+.. ++..+|+|.+.... .......+.+|+.+++.++|+||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l~~~~i 81 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--NKNARNDFLKEIKIMSRLKDPNI 81 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCc
Confidence 3579999999999999999986532 35579999987542 33445678899999999999999
Q ss_pred cceeEEEeeCCeEEEEEecCCCCchhHHHhhCCC---------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcE
Q 001902 728 PALYASFQTKTHVCLITDYCPGGELFLLLDRQPT---------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 798 (998)
Q Consensus 728 v~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~---------~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NI 798 (998)
+++++++...+..|+||||+++++|.+++..... ..++...+..++.||+.||+|||++||+|+||||+||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Ni 161 (296)
T cd05095 82 IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNC 161 (296)
T ss_pred ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheE
Confidence 9999999999999999999999999999876421 2367788999999999999999999999999999999
Q ss_pred EEecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHH
Q 001902 799 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 878 (998)
Q Consensus 799 Li~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIw 878 (998)
|++.++.++|+|||++..+..... ........++..|++||+..+..++.++|||
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Diw 216 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDY-------------------------YRIQGRAVLPIRWMSWESILLGKFTTASDVW 216 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcc-------------------------eeccCcCcCccccCCHHHHhcCCccchhhhh
Confidence 999999999999999854321100 0111223456789999999888899999999
Q ss_pred HHHHHHHHHHc--CCCCCCCCChHHHHHHHHh------CCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHH
Q 001902 879 ALGILLYEMLY--GYTPFRGKTRQKTFANILH------KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 946 (998)
Q Consensus 879 SlG~il~eLlt--G~~Pf~~~~~~~~~~~i~~------~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~ 946 (998)
||||++|+|++ |..||...+..+.+..... .....+....++..+.+|+.+||..||.+||++.+++.
T Consensus 217 SlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 217 AFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred HHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 99999999997 7899987766555443321 11223334456788999999999999999999555443
No 331
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=4.5e-34 Score=316.99 Aligned_cols=251 Identities=21% Similarity=0.307 Sum_probs=204.1
Q ss_pred CcccccccCCCCceeEEEEEEcc-----CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~-----~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
+|++.+.||+|+||.||+|.+.. ....+++|.+.... .......+.+|+.+++.++||||+++++.+...+..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 78 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA--SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL 78 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC--CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCc
Confidence 47889999999999999998743 23578999887542 233456788999999999999999999999999999
Q ss_pred EEEEecCCCCchhHHHhhC----------------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcE
Q 001902 741 CLITDYCPGGELFLLLDRQ----------------------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 798 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~----------------------~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NI 798 (998)
++||||+++++|.+++... ....++...+..++.|++.||.|||+++|+||||||+||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~ni 158 (290)
T cd05045 79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNV 158 (290)
T ss_pred EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheE
Confidence 9999999999999988642 123478899999999999999999999999999999999
Q ss_pred EEecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHH
Q 001902 799 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 878 (998)
Q Consensus 799 Li~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIw 878 (998)
|++.++.+||+|||++........ ........++..|+|||++.+..++.++|||
T Consensus 159 ll~~~~~~kl~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~ 213 (290)
T cd05045 159 LVAEGRKMKISDFGLSRDVYEEDS-------------------------YVKRSKGRIPVKWMAIESLFDHIYTTQSDVW 213 (290)
T ss_pred EEcCCCcEEeccccccccccCccc-------------------------hhcccCCCCCccccCHHHHccCCcchHhHHH
Confidence 999999999999999854321100 0011223456789999999888899999999
Q ss_pred HHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhc
Q 001902 879 ALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 944 (998)
Q Consensus 879 SlG~il~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 944 (998)
||||++|+|++ |..||.+.........+. .....+.....+..+.+|+.+||+.+|.+||++.++
T Consensus 214 slG~~l~el~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i 279 (290)
T cd05045 214 SFGVLLWEIVTLGGNPYPGIAPERLFNLLK-TGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADI 279 (290)
T ss_pred HHHHHHHHHHhcCCCCCCCCCHHHHHHHHh-CCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHH
Confidence 99999999998 999998877666554443 333444445678899999999999999999994443
No 332
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=1.7e-34 Score=314.79 Aligned_cols=256 Identities=29% Similarity=0.466 Sum_probs=211.9
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeeccccc--ChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~--~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
+|.+.+.||+|+||.||++.+..++..+++|+++..... .......+..|+.+++.++||||+++++++......++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 588999999999999999999887777878777643322 122334566789999999999999999999999999999
Q ss_pred EecCCCCchhHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCC
Q 001902 744 TDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 821 (998)
|||+++++|.+++.. .....+++..++.++.|++.||.|||++|++|+||+|+||+++. +.++|+|||++......
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~- 158 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGS- 158 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCC-
Confidence 999999999998864 23456999999999999999999999999999999999999984 67999999988543211
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHH
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 901 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~ 901 (998)
........|++.|+|||.+.+..++.++|+||||+++|+|++|..||.......
T Consensus 159 --------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~ 212 (260)
T cd08222 159 --------------------------CDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLS 212 (260)
T ss_pred --------------------------cccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 011223458889999999988888999999999999999999999998777666
Q ss_pred HHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 902 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 902 ~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
....+.....+. .....+..+.++|.+||..+|++||+ +.++++||||
T Consensus 213 ~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~ 260 (260)
T cd08222 213 VVLRIVEGPTPS-LPETYSRQLNSIMQSMLNKDPSLRPS----AAEILRNPFI 260 (260)
T ss_pred HHHHHHcCCCCC-CcchhcHHHHHHHHHHhcCChhhCcC----HHHHhhCCCC
Confidence 666665543222 22356788999999999999999999 9999999997
No 333
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.4e-34 Score=320.99 Aligned_cols=255 Identities=22% Similarity=0.314 Sum_probs=206.6
Q ss_pred ccccCCcccccccCCCCceeEEEEEEcc-------CCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYA 732 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~-------~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~ 732 (998)
.+..++|.+.+.||+|+||.||+|.+.. .+..+|+|.++... .......+..|+.+++.+ +||||+++++
T Consensus 8 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~ 85 (314)
T cd05099 8 EFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA--TDKDLADLISEMELMKLIGKHKNIINLLG 85 (314)
T ss_pred cccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC--ChHHHHHHHHHHHHHHhccCCCCeeeEEE
Confidence 3445689999999999999999998632 35679999987532 234456788899999999 6999999999
Q ss_pred EEeeCCeEEEEEecCCCCchhHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcE
Q 001902 733 SFQTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 798 (998)
Q Consensus 733 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NI 798 (998)
++...+.+|+||||+++++|.+++.... ...++...+..++.||+.||.|||++||+||||||+||
T Consensus 86 ~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Ni 165 (314)
T cd05099 86 VCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNV 165 (314)
T ss_pred EEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeE
Confidence 9999999999999999999999997532 23588899999999999999999999999999999999
Q ss_pred EEecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHH
Q 001902 799 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 878 (998)
Q Consensus 799 Li~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIw 878 (998)
|++.++.+||+|||++........ ........++..|+|||++.+..++.++|||
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diw 220 (314)
T cd05099 166 LVTEDNVMKIADFGLARGVHDIDY-------------------------YKKTSNGRLPVKWMAPEALFDRVYTHQSDVW 220 (314)
T ss_pred EEcCCCcEEEcccccccccccccc-------------------------ccccccCCCCccccCHHHHccCCcCccchhh
Confidence 999999999999999854321100 0001112345689999999988899999999
Q ss_pred HHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChh
Q 001902 879 ALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 943 (998)
Q Consensus 879 SlG~il~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 943 (998)
||||++|+|++ |..||.+......+..+.... .......++..+.+|+.+||..+|.+||++.+
T Consensus 221 slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 285 (314)
T cd05099 221 SFGILMWEIFTLGGSPYPGIPVEELFKLLREGH-RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQ 285 (314)
T ss_pred HHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHH
Confidence 99999999998 999998887777776665543 22223456778999999999999999999443
No 334
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=3.1e-34 Score=324.21 Aligned_cols=255 Identities=27% Similarity=0.441 Sum_probs=207.6
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEee-CCeEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-KTHVCL 742 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~-~~~~~l 742 (998)
.++|.+++.||.|+||.||+|.+..+++.||+|.+.+... .......+..|+.+++.++||||++++++|.. ...+|+
T Consensus 9 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~l 87 (328)
T cd07856 9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFS-TPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYF 87 (328)
T ss_pred ccceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccc-ccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEE
Confidence 4689999999999999999999999999999998865422 23344667789999999999999999998865 568999
Q ss_pred EEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCC
Q 001902 743 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 822 (998)
Q Consensus 743 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 822 (998)
||||+ +++|..++.. ..+++..+..++.||+.||.|||++||+|+||+|+||+++.++.++|+|||.+.....
T Consensus 88 v~e~~-~~~L~~~~~~---~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~--- 160 (328)
T cd07856 88 VTELL-GTDLHRLLTS---RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDP--- 160 (328)
T ss_pred Eeehh-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCC---
Confidence 99999 6789888864 3478889999999999999999999999999999999999999999999998843210
Q ss_pred CCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCCCChHH
Q 001902 823 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 901 (998)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~ 901 (998)
......+++.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.....
T Consensus 161 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~ 213 (328)
T cd07856 161 ---------------------------QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVN 213 (328)
T ss_pred ---------------------------CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 0122357889999998766 568899999999999999999999998766533
Q ss_pred HHHHHHhC--------------------------CCCCCC---CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCC
Q 001902 902 TFANILHK--------------------------DLKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHP 952 (998)
Q Consensus 902 ~~~~i~~~--------------------------~~~~~~---~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp 952 (998)
....+... ....+. ....+..+.++|.+||+.+|.+||+ +.+++.||
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t----~~ell~~~ 289 (328)
T cd07856 214 QFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRIS----AAEALAHP 289 (328)
T ss_pred HHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCC----HHHHhcCC
Confidence 32221110 001110 1235678999999999999999999 99999999
Q ss_pred CccCC
Q 001902 953 FFKGV 957 (998)
Q Consensus 953 ~f~~~ 957 (998)
||...
T Consensus 290 ~~~~~ 294 (328)
T cd07856 290 YLAPY 294 (328)
T ss_pred ccccc
Confidence 99754
No 335
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.1e-35 Score=342.78 Aligned_cols=256 Identities=24% Similarity=0.360 Sum_probs=220.8
Q ss_pred ccccCCcccccccCCCCceeEEEEEEc-----cCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEe
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 735 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~-----~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~ 735 (998)
.+...+.+..+.||+|+||+||+++.. .....||||.++... +.....+|.+|++++..++|||||+++|++.
T Consensus 482 ~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a--~~~~~~dF~REaeLla~l~H~nIVrLlGVC~ 559 (774)
T KOG1026|consen 482 EIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA--ENQARQDFRREAELLAELQHPNIVRLLGVCR 559 (774)
T ss_pred EechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc--cHHHHHHHHHHHHHHHhccCCCeEEEEEEEc
Confidence 345667888999999999999999873 235689999998642 4446789999999999999999999999999
Q ss_pred eCCeEEEEEecCCCCchhHHHhhC--------C----CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecC
Q 001902 736 TKTHVCLITDYCPGGELFLLLDRQ--------P----TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN 803 (998)
Q Consensus 736 ~~~~~~lV~E~~~ggsL~~~l~~~--------~----~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~ 803 (998)
.++-.|+|+|||..|+|.++|... . ..+|+..+...|+.||+.||.||-++.+|||||-..|+||.++
T Consensus 560 ~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~ 639 (774)
T KOG1026|consen 560 EGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGEN 639 (774)
T ss_pred cCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccc
Confidence 999999999999999999999742 1 2238899999999999999999999999999999999999999
Q ss_pred CcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHH
Q 001902 804 GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGIL 883 (998)
Q Consensus 804 g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~i 883 (998)
..|||+|||+++..-.. +|.+ ....-.-...|||||.+...+|+.+|||||+|++
T Consensus 640 l~VKIsDfGLsRdiYss------DYYk-------------------~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVv 694 (774)
T KOG1026|consen 640 LVVKISDFGLSRDIYSS------DYYK-------------------VRGNTLLPIRWMPPESILYGKFTTESDVWSFGVV 694 (774)
T ss_pred eEEEecccccchhhhhh------hhhc-------------------ccCCceeeeecCCHHHhhcCcccchhhhhhhhhh
Confidence 99999999999653211 1110 0111123568999999999999999999999999
Q ss_pred HHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhc
Q 001902 884 LYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 944 (998)
Q Consensus 884 l~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 944 (998)
|||+++ |.-||.+..+.+.+..|..+.+ ++....++.++.+|+..||+.+|.+||+|+++
T Consensus 695 LWEIFsyG~QPy~glSn~EVIe~i~~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI 755 (774)
T KOG1026|consen 695 LWEIFSYGKQPYYGLSNQEVIECIRAGQL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEI 755 (774)
T ss_pred hhhhhccccCcccccchHHHHHHHHcCCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHH
Confidence 999995 9999999999999999999988 88888899999999999999999999998875
No 336
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=4.7e-34 Score=323.40 Aligned_cols=261 Identities=25% Similarity=0.375 Sum_probs=207.0
Q ss_pred CcccccccCCCCceeEEEEEEccC--CeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEee----CC
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGS--GQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT----KT 738 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~--~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~----~~ 738 (998)
+|++.+.||+|+||.||++.+..+ +..||+|.+.... ........+.+|+.+++++ +|+||+++++.... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVF-SKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccc-ccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 488899999999999999999888 8999999987432 2233345677899999999 69999999986532 35
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccC
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 818 (998)
.+|++|+|+ +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++....
T Consensus 80 ~~~~~~e~~-~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~ 156 (332)
T cd07857 80 ELYLYEELM-EADLHQIIRSG--QPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFS 156 (332)
T ss_pred cEEEEEecc-cCCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecc
Confidence 688999999 57899888654 458999999999999999999999999999999999999999999999999986533
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 897 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~~ 897 (998)
..... .........|++.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.
T Consensus 157 ~~~~~-----------------------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~ 213 (332)
T cd07857 157 ENPGE-----------------------NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGK 213 (332)
T ss_pred ccccc-----------------------ccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCC
Confidence 11100 0011234578999999998765 56889999999999999999999999876
Q ss_pred ChHHHHHHHHhCC----------------------------CCCC-CCCCCcHHHHHHHHHccccCccCcCCChhcHHHH
Q 001902 898 TRQKTFANILHKD----------------------------LKFP-SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 948 (998)
Q Consensus 898 ~~~~~~~~i~~~~----------------------------~~~~-~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~el 948 (998)
+....+..++... ..+. .....+..+.+|+.+||+.||.+||| +.++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t----~~~l 289 (332)
T cd07857 214 DYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRIS----VEEA 289 (332)
T ss_pred CHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCC----HHHH
Confidence 6544443332210 0011 11234678999999999999999999 9999
Q ss_pred HcCCCccCC
Q 001902 949 KKHPFFKGV 957 (998)
Q Consensus 949 L~Hp~f~~~ 957 (998)
+.||||+..
T Consensus 290 l~~~~~~~~ 298 (332)
T cd07857 290 LEHPYLAIW 298 (332)
T ss_pred hcChhhhhh
Confidence 999999754
No 337
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-34 Score=328.03 Aligned_cols=253 Identities=26% Similarity=0.326 Sum_probs=199.4
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC-eEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT-HVCL 742 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~-~~~l 742 (998)
.+.|..-+.||+|+||.||++... +|..||||.+....... ..++.+|+.++.+++|||+|+++|||.+.+ ..+|
T Consensus 74 T~~Fs~~~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~L 149 (361)
T KOG1187|consen 74 TNNFSESNLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLL 149 (361)
T ss_pred HhCCchhcceecCCCeEEEEEEEC-CCCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEE
Confidence 367888899999999999999984 45899999877543221 355999999999999999999999999888 5999
Q ss_pred EEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCCCcEEEecCCcEEEEeccCccccCC
Q 001902 743 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ---GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 743 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~---~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 819 (998)
|+|||++|+|.+.|.......+++....+|+.++++||+|||.. .||||||||+|||+|++..+||+|||+|+..+.
T Consensus 150 VYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~ 229 (361)
T KOG1187|consen 150 VYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPE 229 (361)
T ss_pred EEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCc
Confidence 99999999999999876432789999999999999999999985 399999999999999999999999999955431
Q ss_pred -CCCCCCCcchhhhhcccCCCCcccccccccccccc-cCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCC
Q 001902 820 -KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSF-VGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 897 (998)
Q Consensus 820 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~ 897 (998)
... .... .||.+|+|||++..+..+.++||||||++|.||++|+.|....
T Consensus 230 ~~~~----------------------------~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~ 281 (361)
T KOG1187|consen 230 GDTS----------------------------VSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQS 281 (361)
T ss_pred cccc----------------------------eeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCC
Confidence 110 0111 6999999999999989999999999999999999999888753
Q ss_pred C---hHHHH---HHHHhC-CC---CCCCC--CCCc-----HHHHHHHHHccccCccCcCCChhcHHHH
Q 001902 898 T---RQKTF---ANILHK-DL---KFPSS--TPTS-----LHAKQLMYRLLHRDPKSRLGSHEGANEI 948 (998)
Q Consensus 898 ~---~~~~~---~~i~~~-~~---~~~~~--~~~s-----~~l~~Ll~~~L~~dP~~Rpt~~~~a~el 948 (998)
. ..... ...+.. .+ .-|.. ...+ ..+..+...|++.+|..||++.+++..+
T Consensus 282 ~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L 349 (361)
T KOG1187|consen 282 RPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKEL 349 (361)
T ss_pred CCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHH
Confidence 2 11111 111111 11 00110 1112 1355788999999999999987765555
No 338
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=3.7e-34 Score=318.69 Aligned_cols=261 Identities=27% Similarity=0.425 Sum_probs=210.8
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCe
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 739 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~ 739 (998)
.+..++|++.+.||+|+||.||+|.+..+++.||+|.++... .......+..|+.++..+ +|+||+++++++.....
T Consensus 11 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~ 88 (296)
T cd06618 11 PADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTG--NKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSD 88 (296)
T ss_pred cCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccC--ChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCe
Confidence 456789999999999999999999998889999999987542 222344556677766666 59999999999999999
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCcEEEecCCcEEEEeccCccccC
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 818 (998)
.|+||||+ +++|.+++.... ..+++..+..++.||+.||.|||+ .||+||||+|+||+++.++.++|+|||++....
T Consensus 89 ~~~v~e~~-~~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~ 166 (296)
T cd06618 89 VFICMELM-STCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLV 166 (296)
T ss_pred EEEEeecc-CcCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhcc
Confidence 99999999 557777776533 368999999999999999999997 599999999999999999999999999884432
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCC----CCChhHHHHHHHHHHHHHcCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALGILLYEMLYGYTPF 894 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~----~~~~sDIwSlG~il~eLltG~~Pf 894 (998)
... ......+++.|+|||.+.+.. ++.++||||||+++|+|++|+.||
T Consensus 167 ~~~----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~ 218 (296)
T cd06618 167 DSK----------------------------AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPY 218 (296)
T ss_pred CCC----------------------------cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCC
Confidence 100 011224788999999987654 788999999999999999999999
Q ss_pred CCCCh-HHHHHHHHhCCCC-CCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 895 RGKTR-QKTFANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 895 ~~~~~-~~~~~~i~~~~~~-~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
..... .+.+..+.....+ .+.....+.++.+|+.+||..||.+||+ +.++++||||+..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~ 279 (296)
T cd06618 219 KNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPK----YRELLQHPFIRRY 279 (296)
T ss_pred CcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCC----HHHHhcChhhhcc
Confidence 76433 3444555544322 2333346788999999999999999999 9999999999864
No 339
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.8e-35 Score=348.93 Aligned_cols=273 Identities=28% Similarity=0.424 Sum_probs=209.6
Q ss_pred ccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC-----
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK----- 737 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~----- 737 (998)
...+|+.+..||+||||.||+|+++-+|+.||||.+.... +......+.+|+.+|.+|+|||||++|..+.+.
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 3568999999999999999999999999999999998654 556677889999999999999999988653110
Q ss_pred --------------------------------------------------------------------------------
Q 001902 738 -------------------------------------------------------------------------------- 737 (998)
Q Consensus 738 -------------------------------------------------------------------------------- 737 (998)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred ----------------------------------CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHH
Q 001902 738 ----------------------------------THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYL 783 (998)
Q Consensus 738 ----------------------------------~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~L 783 (998)
..+||-||||+..+|.+++.++.... .....+.++++|++||+|+
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFreIlEGLaYI 713 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFREILEGLAYI 713 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHHHHHHHHHHH
Confidence 02789999999999999998764321 4678899999999999999
Q ss_pred HHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccc-cccccccccCCCCccc
Q 001902 784 HCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAE-PMRASNSFVGTEEYIA 862 (998)
Q Consensus 784 H~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gt~~y~a 862 (998)
|++|||||||||.||++++++.|||+|||+|+..-.... .............. .....+..+||..|+|
T Consensus 714 H~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~----------~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvA 783 (1351)
T KOG1035|consen 714 HDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLE----------SIDQDLSFSTNRAGSNDGDLTSQVGTALYVA 783 (1351)
T ss_pred HhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhh----------hHhhccCccccccCCCCcccccccceeeeec
Confidence 999999999999999999999999999999965210000 00000000011111 1224567899999999
Q ss_pred chhhcCCC---CCChhHHHHHHHHHHHHHcCCCCCCCC-ChHHHHHHHHhCCCCCCCCC--CCcHHHHHHHHHccccCcc
Q 001902 863 PEIIAGAG---HTSAVDWWALGILLYEMLYGYTPFRGK-TRQKTFANILHKDLKFPSST--PTSLHAKQLMYRLLHRDPK 936 (998)
Q Consensus 863 PE~l~~~~---~~~~sDIwSlG~il~eLltG~~Pf~~~-~~~~~~~~i~~~~~~~~~~~--~~s~~l~~Ll~~~L~~dP~ 936 (998)
||++.+.. |+.|+|+||||++|+||+. ||... .....+..+-.+.++.+... +--+.-..+|..||+.||+
T Consensus 784 PEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~ 860 (1351)
T KOG1035|consen 784 PELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPS 860 (1351)
T ss_pred HHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCc
Confidence 99997754 9999999999999999995 46442 33344455555556655111 1123446899999999999
Q ss_pred CcCCChhcHHHHHcCCCcc
Q 001902 937 SRLGSHEGANEIKKHPFFK 955 (998)
Q Consensus 937 ~Rpt~~~~a~elL~Hp~f~ 955 (998)
+||| |.+||++.||.
T Consensus 861 kRPt----A~eLL~s~llp 875 (1351)
T KOG1035|consen 861 KRPT----ATELLNSELLP 875 (1351)
T ss_pred cCCC----HHHHhhccCCC
Confidence 9999 99999999988
No 340
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.4e-34 Score=323.22 Aligned_cols=262 Identities=21% Similarity=0.309 Sum_probs=209.7
Q ss_pred ccccccCCcccccccCCCCceeEEEEEEccC-------CeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccce
Q 001902 659 GEQINLQHFRPIKPLGSGDTGSVHLVELCGS-------GQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPAL 730 (998)
Q Consensus 659 ~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~-------~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l 730 (998)
.+.+...+|++.+.||+|+||.||+|.+... +..+|+|.+... ........+.+|+.+++++ +|+||+++
T Consensus 6 ~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~ 83 (334)
T cd05100 6 KWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD--ATDKDLSDLVSEMEMMKMIGKHKNIINL 83 (334)
T ss_pred ccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc--cCHHHHHHHHHHHHHHHhhcCCCCeeee
Confidence 3445567899999999999999999986432 247899988743 2334456788999999999 89999999
Q ss_pred eEEEeeCCeEEEEEecCCCCchhHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCC
Q 001902 731 YASFQTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPE 796 (998)
Q Consensus 731 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~ 796 (998)
++++...+.++++|||+++++|.+++.+.. ...++...+..++.||+.||.|||++||+||||||+
T Consensus 84 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~ 163 (334)
T cd05100 84 LGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAAR 163 (334)
T ss_pred eEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccc
Confidence 999999999999999999999999997532 224778889999999999999999999999999999
Q ss_pred cEEEecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhH
Q 001902 797 NVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVD 876 (998)
Q Consensus 797 NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sD 876 (998)
|||++.++.+||+|||++........ ........++..|+|||++.+..++.++|
T Consensus 164 Nill~~~~~~kL~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 218 (334)
T cd05100 164 NVLVTEDNVMKIADFGLARDVHNIDY-------------------------YKKTTNGRLPVKWMAPEALFDRVYTHQSD 218 (334)
T ss_pred eEEEcCCCcEEECCcccceecccccc-------------------------cccccCCCcCceEcCHHHhccCCcCchhh
Confidence 99999999999999999854321100 00111223456899999999999999999
Q ss_pred HHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHH
Q 001902 877 WWALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 948 (998)
Q Consensus 877 IwSlG~il~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~el 948 (998)
||||||++|+|++ |..||.+.+.......+.... ..+.....+.++.+|+.+||..+|.+||++.+++..+
T Consensus 219 i~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l 290 (334)
T cd05100 219 VWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGH-RMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDL 290 (334)
T ss_pred hHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHH
Confidence 9999999999998 899999887777666665432 2233345678899999999999999999944443333
No 341
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.1e-33 Score=308.43 Aligned_cols=246 Identities=21% Similarity=0.287 Sum_probs=198.5
Q ss_pred ccCCCCceeEEEEEEc--cCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEecCCC
Q 001902 672 PLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPG 749 (998)
Q Consensus 672 ~LG~G~~g~Vy~a~~~--~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~g 749 (998)
.||+|+||.||+|.+. ..+..+|+|++.... .......+.+|+.++++++|+||+++++++. .+..++||||+++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~--~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~ 78 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASG 78 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc--ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCC
Confidence 4899999999999774 446679999987542 3344567889999999999999999999875 4578999999999
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcch
Q 001902 750 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 829 (998)
Q Consensus 750 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 829 (998)
++|.+++... ...+++..+..++.||+.||.|||++|++|+||||+|||++.++.+||+|||++..........
T Consensus 79 ~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~----- 152 (257)
T cd05115 79 GPLNKFLSGK-KDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYY----- 152 (257)
T ss_pred CCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccce-----
Confidence 9999998754 2458999999999999999999999999999999999999999999999999985432111100
Q ss_pred hhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHh
Q 001902 830 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILH 908 (998)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~~~~~~i~~ 908 (998)
.......+++.|+|||++.+..++.++|||||||++|+|++ |..||...........+..
T Consensus 153 -------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~ 213 (257)
T cd05115 153 -------------------KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQ 213 (257)
T ss_pred -------------------eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHC
Confidence 00111234678999999988889999999999999999996 9999998877776665555
Q ss_pred CCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHH
Q 001902 909 KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 946 (998)
Q Consensus 909 ~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~ 946 (998)
+. ..+.....+.++.+++.+||..+|.+||++.+++.
T Consensus 214 ~~-~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 214 GK-RLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred CC-CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 43 22333456889999999999999999999655433
No 342
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=4.8e-34 Score=310.20 Aligned_cols=242 Identities=21% Similarity=0.351 Sum_probs=202.0
Q ss_pred ccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEE
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 742 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 742 (998)
..++|++.+.||.|+||.||++.. +++.+|+|.++... ....+.+|+.+++.++||||+++++++..+ ..++
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~-----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~ 75 (254)
T cd05083 4 NLQKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV-----TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYI 75 (254)
T ss_pred cHHHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc-----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEE
Confidence 346799999999999999999874 78899999886432 235678899999999999999999998764 4799
Q ss_pred EEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCC
Q 001902 743 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 822 (998)
Q Consensus 743 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 822 (998)
||||+++++|.+++.......++...+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++.....
T Consensus 76 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~--- 152 (254)
T cd05083 76 VMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSM--- 152 (254)
T ss_pred EEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccc---
Confidence 99999999999999876555689999999999999999999999999999999999999999999999998843210
Q ss_pred CCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCChHH
Q 001902 823 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQK 901 (998)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~~ 901 (998)
.......+..|+|||.+.+..++.++|+|||||++|+|++ |.+||...+...
T Consensus 153 ---------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~ 205 (254)
T cd05083 153 ---------------------------GVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE 205 (254)
T ss_pred ---------------------------cCCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH
Confidence 0011234567999999988889999999999999999997 999999887766
Q ss_pred HHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChh
Q 001902 902 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 943 (998)
Q Consensus 902 ~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 943 (998)
....+... ...+.....+..+.+|+.+||+.+|.+||++.+
T Consensus 206 ~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 246 (254)
T cd05083 206 VKECVEKG-YRMEPPEGCPADVYVLMTSCWETEPKKRPSFHK 246 (254)
T ss_pred HHHHHhCC-CCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 66555443 333333456789999999999999999999444
No 343
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=4.5e-34 Score=315.35 Aligned_cols=253 Identities=30% Similarity=0.473 Sum_probs=206.8
Q ss_pred cccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCccceeEEEeeCCeEEEEEe
Q 001902 667 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 667 y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lV~E 745 (998)
|.+.+.||.|++|.||+|.+..+++.+++|.+...... .......+|+..+++++ |+||+++++++..++..|+|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS--WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc--hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 67889999999999999999888999999998754321 12233456889999998 9999999999999999999999
Q ss_pred cCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCC
Q 001902 746 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 825 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 825 (998)
|+ +++|.+++.......+++..+..++.|++.+|.|||++|++|+||+|+||+++.++.++|+|||++......
T Consensus 79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~----- 152 (283)
T cd07830 79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR----- 152 (283)
T ss_pred cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCC-----
Confidence 99 889999887765456899999999999999999999999999999999999999999999999988543211
Q ss_pred CcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001902 826 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 904 (998)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~ 904 (998)
.......++..|+|||++.. ..++.++|+||||+++|+|++|++||........+.
T Consensus 153 -----------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~ 209 (283)
T cd07830 153 -----------------------PPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLY 209 (283)
T ss_pred -----------------------CCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHH
Confidence 01123458889999998854 457889999999999999999999998876655554
Q ss_pred HHHhCC-------------------CCCCC---------CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 905 NILHKD-------------------LKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 905 ~i~~~~-------------------~~~~~---------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
.+...- ..++. ....+..+.+||.+||..+|.+||| +.+++.||||
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt----~~ei~~~~~~ 283 (283)
T cd07830 210 KICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPT----ASQALQHPYF 283 (283)
T ss_pred HHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCC----HHHHhhCCCC
Confidence 433210 00000 0122567899999999999999999 9999999997
No 344
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=9.5e-34 Score=307.62 Aligned_cols=251 Identities=24% Similarity=0.367 Sum_probs=210.3
Q ss_pred cccccccCCCCceeEEEEEEccCC----eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEE
Q 001902 667 FRPIKPLGSGDTGSVHLVELCGSG----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 742 (998)
Q Consensus 667 y~~~~~LG~G~~g~Vy~a~~~~~~----~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 742 (998)
|++.+.||.|+||.||++.+...+ ..+|+|.+.... .......+..|+.+++.++|+||+++++++...+..++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 78 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA--DEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMI 78 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC--ChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEE
Confidence 457789999999999999997766 899999987542 22256788899999999999999999999999999999
Q ss_pred EEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCC
Q 001902 743 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 822 (998)
Q Consensus 743 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 822 (998)
+|||+++++|.+++.......+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++........
T Consensus 79 i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDY 158 (258)
T ss_pred EEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecccccc
Confidence 99999999999999775433389999999999999999999999999999999999999999999999999855331100
Q ss_pred CCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCChHH
Q 001902 823 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQK 901 (998)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~~ 901 (998)
.......+++.|+|||.+.+..++.++|||||||++|+|++ |.+||...+...
T Consensus 159 --------------------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~ 212 (258)
T smart00219 159 --------------------------YKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEE 212 (258)
T ss_pred --------------------------cccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 00001226789999999988889999999999999999998 899998887777
Q ss_pred HHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 902 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 902 ~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
....+...... +.....+.++.+++.+||..||.+||| +.++++
T Consensus 213 ~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~Rpt----~~~ll~ 256 (258)
T smart00219 213 VLEYLKKGYRL-PKPENCPPEIYKLMLQCWAEDPEDRPT----FSELVE 256 (258)
T ss_pred HHHHHhcCCCC-CCCCcCCHHHHHHHHHHCcCChhhCcC----HHHHHh
Confidence 77766655432 233447889999999999999999999 777764
No 345
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=4.3e-34 Score=315.05 Aligned_cols=254 Identities=28% Similarity=0.469 Sum_probs=210.7
Q ss_pred cccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEec
Q 001902 667 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 746 (998)
Q Consensus 667 y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~ 746 (998)
|++.+.||+|++|.||+|.+..+++.|++|++.... ........+..|+.+++.++|+||+++++++...+..++||||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN-EEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc-ccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecC
Confidence 667889999999999999999999999999998653 2233345677899999999999999999999999999999999
Q ss_pred CCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCC
Q 001902 747 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 826 (998)
Q Consensus 747 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~ 826 (998)
++ ++|.+++.+.. ..+++..+..++.|++.||.|||++||+|+||+|+||+++.++.++|+|||.+.......
T Consensus 80 ~~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~----- 152 (282)
T cd07829 80 CD-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPL----- 152 (282)
T ss_pred cC-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCc-----
Confidence 96 68999997753 359999999999999999999999999999999999999999999999999885432110
Q ss_pred cchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001902 827 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 905 (998)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~ 905 (998)
.......++..|+|||.+.+. .++.++|||||||++|+|++|.+||.+.+....+..
T Consensus 153 ----------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~ 210 (282)
T cd07829 153 ----------------------RTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFK 210 (282)
T ss_pred ----------------------cccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHH
Confidence 011223467889999999776 788899999999999999999999988776666555
Q ss_pred HHhC------------------CCCCCC---------CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 906 ILHK------------------DLKFPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 906 i~~~------------------~~~~~~---------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
+... ...++. ....+..+.++|.+||..||.+||+ +.++++||||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~----~~~~l~~p~~ 282 (282)
T cd07829 211 IFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRIS----AKEALKHPYF 282 (282)
T ss_pred HHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCC----HHHHhhCcCC
Confidence 4431 000111 1123668999999999999999999 9999999998
No 346
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1e-33 Score=313.02 Aligned_cols=255 Identities=22% Similarity=0.372 Sum_probs=200.7
Q ss_pred cCCcccccccCCCCceeEEEEEE----ccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEee--C
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVEL----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--K 737 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~----~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~--~ 737 (998)
..+|++++.||+|+||.||++.. ..+++.||+|.+... .......+.+|+.+++.++||||+++++++.. .
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 79 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS---TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 79 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCC
Confidence 35799999999999999999974 457889999998753 33445678899999999999999999997653 4
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
..+++||||+++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++...
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~ 158 (284)
T cd05081 80 RNLRLVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVL 158 (284)
T ss_pred CceEEEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccc
Confidence 57899999999999999997642 35899999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 897 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~ 897 (998)
...... ........++..|+|||++.+..++.++|||||||++|+|++|..|+...
T Consensus 159 ~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~ 214 (284)
T cd05081 159 PQDKEY------------------------YKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSP 214 (284)
T ss_pred cCCCcc------------------------eeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCc
Confidence 311100 00011123455699999999888999999999999999999988776433
Q ss_pred ChH---------------HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 898 TRQ---------------KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 898 ~~~---------------~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
... ..+..++.....++....++..+.+|+.+||..+|++||| +.++++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt----~~ei~~ 278 (284)
T cd05081 215 PAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPS----FSELAL 278 (284)
T ss_pred chhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCC----HHHHHH
Confidence 211 1111233333344445567889999999999999999999 555543
No 347
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=5.8e-34 Score=315.14 Aligned_cols=254 Identities=22% Similarity=0.339 Sum_probs=201.4
Q ss_pred CcccccccCCCCceeEEEEEE----ccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC--Ce
Q 001902 666 HFRPIKPLGSGDTGSVHLVEL----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--TH 739 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~----~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~~ 739 (998)
-|++++.||+|+||.||+|.. ..+++.||+|.++... .......+.+|+.+++.++||||+++++++... ..
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 82 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence 479999999999999999984 4568899999987542 334456788999999999999999999988765 67
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCC
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 819 (998)
.++||||++|++|.+++.+.. ..++...+..++.||+.||+|||++||+||||||+||+++.++.++|+|||++.....
T Consensus 83 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~ 161 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIET 161 (284)
T ss_pred eEEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCcccccccc
Confidence 899999999999999987642 3589999999999999999999999999999999999999999999999999854321
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCC-
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT- 898 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~- 898 (998)
.... ........++..|+|||++.+..++.++|||||||++|+|++++.|+....
T Consensus 162 ~~~~------------------------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~ 217 (284)
T cd05079 162 DKEY------------------------YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMT 217 (284)
T ss_pred Cccc------------------------eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccc
Confidence 1100 011123457788999999988889999999999999999999877653211
Q ss_pred -------------hHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 899 -------------RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 899 -------------~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
...............+.....+..+.+|+.+||+.||.+||+ +.++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~il~ 278 (284)
T cd05079 218 LFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTT----FQNLIE 278 (284)
T ss_pred hhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcC----HHHHHH
Confidence 111111222223334444557889999999999999999999 666654
No 348
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=8.5e-34 Score=308.34 Aligned_cols=250 Identities=21% Similarity=0.344 Sum_probs=206.8
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
..+|++.+.||.|+||.||++.+. .+..+|+|.+..... ....+.+|+++++.++||||+++++++......|+|
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v 77 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAM----SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLV 77 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCC----CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEE
Confidence 457899999999999999999884 477899998875432 234677899999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
|||+++++|.+++.... ..+++..++.++.|++.||+|||+.+++|+||||+||+++.++.++|+|||++.......
T Consensus 78 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-- 154 (256)
T cd05112 78 FEFMEHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ-- 154 (256)
T ss_pred EEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCc--
Confidence 99999999999987643 358899999999999999999999999999999999999999999999999885432110
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCChHHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKT 902 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~~~ 902 (998)
........++..|+|||++.+..++.++||||||+++|+|++ |..||........
T Consensus 155 ------------------------~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~ 210 (256)
T cd05112 155 ------------------------YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEV 210 (256)
T ss_pred ------------------------ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHH
Confidence 001112235678999999998889999999999999999998 9999988877776
Q ss_pred HHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 903 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 903 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
...+.... ........+..+.+|+.+||..+|.+||+ +.++++
T Consensus 211 ~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~----~~~~l~ 253 (256)
T cd05112 211 VETINAGF-RLYKPRLASQSVYELMQHCWKERPEDRPS----FSLLLH 253 (256)
T ss_pred HHHHhCCC-CCCCCCCCCHHHHHHHHHHcccChhhCCC----HHHHHH
Confidence 66665432 22223346789999999999999999999 666654
No 349
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.2e-33 Score=311.61 Aligned_cols=254 Identities=22% Similarity=0.298 Sum_probs=208.1
Q ss_pred ccCCcccccccCCCCceeEEEEEEccCCe----EEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 738 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~----~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 738 (998)
..++|++.+.||+|+||.||+|.+..+|. .+|+|.+.... .......+.+|+.+++.++|+||+++++++.. .
T Consensus 5 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~ 81 (279)
T cd05057 5 KETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET--SPKANKEILDEAYVMASVDHPHVVRLLGICLS-S 81 (279)
T ss_pred CHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-C
Confidence 45689999999999999999999876654 68999877543 24455678889999999999999999999887 7
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccC
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 818 (998)
..++||||+++++|.+++.... ..+++..+..++.||+.||+|||++||+|+||||+|||++.++.+||+|||++....
T Consensus 82 ~~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~ 160 (279)
T cd05057 82 QVQLITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLD 160 (279)
T ss_pred ceEEEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCccccccc
Confidence 8999999999999999997653 348999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 897 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~ 897 (998)
..... .......++..|+|||.+....++.++|+|||||++|+|++ |..||.+.
T Consensus 161 ~~~~~-------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 215 (279)
T cd05057 161 VDEKE-------------------------YHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGI 215 (279)
T ss_pred Ccccc-------------------------eecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCC
Confidence 11100 00011224568999999988889999999999999999998 99999988
Q ss_pred ChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHH
Q 001902 898 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 946 (998)
Q Consensus 898 ~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~ 946 (998)
...+....+... ...+.....+..+.+++.+||..||..||++.+++.
T Consensus 216 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 216 PAVEIPDLLEKG-ERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred CHHHHHHHHhCC-CCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 776666555543 334444456788999999999999999999555433
No 350
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.9e-33 Score=304.49 Aligned_cols=244 Identities=23% Similarity=0.349 Sum_probs=199.5
Q ss_pred cccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEecCCCC
Q 001902 671 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 750 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~gg 750 (998)
+.||+|+||.||++.. .++..+|+|.+.... .......+.+|+.+++.++||||+++++++...+..++||||++++
T Consensus 1 ~~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 77 (250)
T cd05085 1 ELLGKGNFGEVFKGTL-KDKTPVAVKTCKEDL--PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGG 77 (250)
T ss_pred CccCCCCCceEEEEEe-cCCcEEEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCC
Confidence 3689999999999986 468899999987542 2333456788999999999999999999999999999999999999
Q ss_pred chhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcchh
Q 001902 751 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 830 (998)
Q Consensus 751 sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 830 (998)
+|.+++.... ..+++..+..++.|++.+|.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 78 ~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~--------- 147 (250)
T cd05085 78 DFLSFLRKKK-DELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGI--------- 147 (250)
T ss_pred cHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccc---------
Confidence 9999987643 458899999999999999999999999999999999999999999999999884321000
Q ss_pred hhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhC
Q 001902 831 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHK 909 (998)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~~~~~~i~~~ 909 (998)
........++..|+|||++.+..++.++||||||+++|++++ |..||.+.........+...
T Consensus 148 -----------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~ 210 (250)
T cd05085 148 -----------------YSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKG 210 (250)
T ss_pred -----------------cccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC
Confidence 000111234568999999998889999999999999999998 99999888776666655543
Q ss_pred CCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcH
Q 001902 910 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGA 945 (998)
Q Consensus 910 ~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a 945 (998)
. ........+..+.+|+.+||..+|.+||++.+++
T Consensus 211 ~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~ 245 (250)
T cd05085 211 Y-RMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQ 245 (250)
T ss_pred C-CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHH
Confidence 2 2223345678999999999999999999944433
No 351
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-36 Score=303.63 Aligned_cols=262 Identities=24% Similarity=0.360 Sum_probs=214.5
Q ss_pred ccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHH-HHhCCCCCccceeEEEeeCCeEE
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREI-LDMLDHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~i-l~~l~h~nIv~l~~~~~~~~~~~ 741 (998)
.-+..+-+..||.|+||+|++..++.+|+..|||.++... ......++..|.+. ++.-++||||++|+....++..|
T Consensus 62 ~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n--~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcW 139 (361)
T KOG1006|consen 62 TSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNN--IEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCW 139 (361)
T ss_pred ccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeecc--chHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCcee
Confidence 3456677888999999999999999999999999998653 33445667777765 44558999999999999999999
Q ss_pred EEEecCCCCchhHHHhh---CCCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 742 LITDYCPGGELFLLLDR---QPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~---~~~~~l~~~~~~~i~~qil~aL~~LH~~-~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
|.||+| ..||..+.+. .....+++..+..|....+.||.||-.. .|||||+||+|||++..|.+||||||++..+
T Consensus 140 iCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqL 218 (361)
T KOG1006|consen 140 ICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQL 218 (361)
T ss_pred eeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhH
Confidence 999999 7777655442 2234599999999999999999999865 8999999999999999999999999998443
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC--CCCCChhHHHHHHHHHHHHHcCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFR 895 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~sDIwSlG~il~eLltG~~Pf~ 895 (998)
. .+...+...|-..|||||.+.. ..|+.+||+||||++|||+.||..||.
T Consensus 219 v----------------------------~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr 270 (361)
T KOG1006|consen 219 V----------------------------DSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYR 270 (361)
T ss_pred H----------------------------HHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcc
Confidence 2 1122334578999999999954 468889999999999999999999998
Q ss_pred CCCh-HHHHHHHHhCCCCCCCC----CCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCCh
Q 001902 896 GKTR-QKTFANILHKDLKFPSS----TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 959 (998)
Q Consensus 896 ~~~~-~~~~~~i~~~~~~~~~~----~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 959 (998)
+-+. .+++..++.++.+.... ...+..+..||.-||.+|-+.||. ..+|+++||++-...
T Consensus 271 ~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpk----y~~Lk~~~fyr~y~~ 335 (361)
T KOG1006|consen 271 KWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPK----YDDLKKFPFYRMYAV 335 (361)
T ss_pred hHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcc----hhhhhcCchhhhhhh
Confidence 8544 56777777776654322 346888999999999999999999 999999999987533
No 352
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=328.08 Aligned_cols=244 Identities=34% Similarity=0.520 Sum_probs=207.8
Q ss_pred ccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCeEE
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~ 741 (998)
..+.|.+...+|.|+||.|-.+.+..+++.+++|++.+.. ....+|+.++... +||||+++++.+.+..+.|
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~-------~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~ 392 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA-------DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIY 392 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc-------cccccccchhhhhcCCCcceeecceecCCceee
Confidence 3678999999999999999999999999999999998652 2334577666555 8999999999999999999
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEE-ecCCcEEEEeccCccccCCC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL-QGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi-~~~g~vkL~DFG~a~~~~~~ 820 (998)
+|||++.|+-|.+.+..++. +. ..+..|+.+|+.++.|||.+|||||||||+|||+ +..|+++|+|||.++.....
T Consensus 393 ~v~e~l~g~ell~ri~~~~~--~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 393 LVMELLDGGELLRRIRSKPE--FC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred eeehhccccHHHHHHHhcch--hH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 99999999988877766432 33 6777899999999999999999999999999999 58999999999998654311
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChH
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 900 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~ 900 (998)
..+.+-|..|.|||++....|+.++|+||||++||+|++|+.||......
T Consensus 470 ------------------------------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~ 519 (612)
T KOG0603|consen 470 ------------------------------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG 519 (612)
T ss_pred ------------------------------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch
Confidence 12346788999999999999999999999999999999999999876555
Q ss_pred -HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 901 -KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 901 -~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
+++.++...... ..+|..+++||+.||+.||.+||+ +.+++.||||
T Consensus 520 ~ei~~~i~~~~~s----~~vS~~AKdLl~~LL~~dP~~Rl~----~~~i~~h~w~ 566 (612)
T KOG0603|consen 520 IEIHTRIQMPKFS----ECVSDEAKDLLQQLLQVDPALRLG----ADEIGAHPWF 566 (612)
T ss_pred HHHHHhhcCCccc----cccCHHHHHHHHHhccCChhhCcC----hhhhccCcch
Confidence 444444443322 567999999999999999999999 9999999999
No 353
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=9e-34 Score=313.32 Aligned_cols=250 Identities=23% Similarity=0.337 Sum_probs=196.0
Q ss_pred Cc-ccccccCCCCceeEEEEEE----ccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEee--CC
Q 001902 666 HF-RPIKPLGSGDTGSVHLVEL----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KT 738 (998)
Q Consensus 666 ~y-~~~~~LG~G~~g~Vy~a~~----~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~ 738 (998)
+| ++++.||+|+||+||++.. ..++..+|+|++.... .......+.+|+.+++.++||||+++++++.. ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (283)
T cd05080 4 RYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC--GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGK 81 (283)
T ss_pred hhceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCc
Confidence 45 8999999999999988653 3568899999987542 22344667789999999999999999998764 45
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccC
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 818 (998)
.+++||||+++++|.+++... .+++..++.++.|++.||.|||++||+|+||||+|||++.++.++|+|||++....
T Consensus 82 ~~~lv~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 82 GLQLIMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred eEEEEecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccC
Confidence 689999999999999999763 48999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 898 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~ 898 (998)
..... ........++..|+|||.+.+..++.++|||||||++|+|++|..||....
T Consensus 159 ~~~~~------------------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~ 214 (283)
T cd05080 159 EGHEY------------------------YRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPP 214 (283)
T ss_pred Ccchh------------------------hccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCc
Confidence 11100 001122345677999999988889999999999999999999999986543
Q ss_pred hH--------------HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhc
Q 001902 899 RQ--------------KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 944 (998)
Q Consensus 899 ~~--------------~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 944 (998)
.. .............+.....+..+.+|+.+||..+|++||++.++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i 274 (283)
T cd05080 215 KKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSL 274 (283)
T ss_pred chhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHH
Confidence 21 01111111122223334567899999999999999999994443
No 354
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.3e-33 Score=305.91 Aligned_cols=246 Identities=26% Similarity=0.365 Sum_probs=202.9
Q ss_pred cccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEecCCCC
Q 001902 671 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 750 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~gg 750 (998)
+.||.|+||.||++.+.. ++.|++|.+..... ......+.+|+.++++++|+||+++++++......++||||++++
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 77 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLP--PDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGG 77 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCC
Confidence 468999999999999977 99999999876533 235567889999999999999999999999999999999999999
Q ss_pred chhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcchh
Q 001902 751 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 830 (998)
Q Consensus 751 sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~ 830 (998)
+|.+++.... ..++...+..++.+++.+|.|||+++++||||||+|||++.++.++|+|||++.........
T Consensus 78 ~l~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~------- 149 (251)
T cd05041 78 SLLTFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYT------- 149 (251)
T ss_pred cHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcce-------
Confidence 9999987643 35889999999999999999999999999999999999999999999999998543210000
Q ss_pred hhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhC
Q 001902 831 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHK 909 (998)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~~~~~~i~~~ 909 (998)
.......++..|+|||.+.+..++.++|||||||++|+|++ |..||...........+...
T Consensus 150 ------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~ 211 (251)
T cd05041 150 ------------------VSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESG 211 (251)
T ss_pred ------------------eccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcC
Confidence 00011234567999999988889999999999999999998 89999887765555554433
Q ss_pred CCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 910 DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 910 ~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
...+.....+.++.+|+.+||..+|.+||+ +.++++
T Consensus 212 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~ell~ 247 (251)
T cd05041 212 -YRMPAPQLCPEEIYRLMLQCWAYDPENRPS----FSEIYN 247 (251)
T ss_pred -CCCCCCccCCHHHHHHHHHHhccChhhCcC----HHHHHH
Confidence 333334456789999999999999999999 777664
No 355
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.6e-33 Score=309.30 Aligned_cols=244 Identities=23% Similarity=0.331 Sum_probs=197.8
Q ss_pred cccCCCCceeEEEEEEccCCe--EEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCeEEEEEecC
Q 001902 671 KPLGSGDTGSVHLVELCGSGQ--YFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYC 747 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~~~~--~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lV~E~~ 747 (998)
+.||+|+||.||++.+..++. .+++|.++.. ........+.+|+.++.++ +||||+++++++...+.+|+||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 78 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 78 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEcccc--CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC
Confidence 358999999999999987775 4688877642 2334456788899999999 8999999999999999999999999
Q ss_pred CCCchhHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccC
Q 001902 748 PGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 813 (998)
Q Consensus 748 ~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~ 813 (998)
++++|.+++.... ...++...+..++.|++.||+|||++|++|+||||+|||++.++.+||+|||+
T Consensus 79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl 158 (270)
T cd05047 79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGL 158 (270)
T ss_pred CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCC
Confidence 9999999997532 12478999999999999999999999999999999999999999999999998
Q ss_pred ccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCC
Q 001902 814 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYT 892 (998)
Q Consensus 814 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~ 892 (998)
+..... .........+..|+|||++....++.++|||||||++|+|++ |..
T Consensus 159 ~~~~~~----------------------------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~ 210 (270)
T cd05047 159 SRGQEV----------------------------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT 210 (270)
T ss_pred ccccch----------------------------hhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCC
Confidence 732110 000111234567999999988889999999999999999996 999
Q ss_pred CCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcH
Q 001902 893 PFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGA 945 (998)
Q Consensus 893 Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a 945 (998)
||.+.+....+..+... ...+.....+..+.+|+.+||..||.+||++.+++
T Consensus 211 pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il 262 (270)
T cd05047 211 PYCGMTCAELYEKLPQG-YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 262 (270)
T ss_pred CccccCHHHHHHHHhCC-CCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHH
Confidence 99887776666655443 22223344678899999999999999999944443
No 356
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.5e-33 Score=310.89 Aligned_cols=256 Identities=19% Similarity=0.212 Sum_probs=208.7
Q ss_pred cccCCcccccccCCCCceeEEEEEEcc----CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEee-
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCG----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT- 736 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~----~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~- 736 (998)
+..++|++.+.||+|+||.||+|.+.. ++..+++|.+... ........+.+|+.+++.++|+||+++++++..
T Consensus 3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~ 80 (280)
T cd05043 3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH--ASEIQVTLLLQESCLLYGLSHQNILPILHVCIED 80 (280)
T ss_pred cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 445789999999999999999999865 3688999988643 244456778899999999999999999998765
Q ss_pred CCeEEEEEecCCCCchhHHHhhCCC------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEe
Q 001902 737 KTHVCLITDYCPGGELFLLLDRQPT------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTD 810 (998)
Q Consensus 737 ~~~~~lV~E~~~ggsL~~~l~~~~~------~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~D 810 (998)
....+++++|+++++|.+++..... ..+++..+..++.||+.||+|||+++++|+||||+||+++.++.+||+|
T Consensus 81 ~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 81 GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECC
Confidence 5778999999999999999875322 4589999999999999999999999999999999999999999999999
Q ss_pred ccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-
Q 001902 811 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY- 889 (998)
Q Consensus 811 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt- 889 (998)
||+++.+...... .......++..|+|||++.+..++.++|||||||++|++++
T Consensus 161 ~g~~~~~~~~~~~-------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~ 215 (280)
T cd05043 161 NALSRDLFPMDYH-------------------------CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTL 215 (280)
T ss_pred CCCcccccCCceE-------------------------EeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcC
Confidence 9998654211100 00112245678999999998889999999999999999998
Q ss_pred CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcH
Q 001902 890 GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGA 945 (998)
Q Consensus 890 G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a 945 (998)
|..||...+.......+.. ...++....++..+.+++.+||..||++|||+.+++
T Consensus 216 g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~ 270 (280)
T cd05043 216 GQTPYVEIDPFEMAAYLKD-GYRLAQPINCPDELFAVMACCWALDPEERPSFSQLV 270 (280)
T ss_pred CCCCcCcCCHHHHHHHHHc-CCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHH
Confidence 9999988776665544443 334444455688999999999999999999944433
No 357
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=4.9e-34 Score=311.12 Aligned_cols=238 Identities=20% Similarity=0.306 Sum_probs=191.3
Q ss_pred cccCCCCceeEEEEEEccCCe-------EEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 671 KPLGSGDTGSVHLVELCGSGQ-------YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~~~~-------~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
+.||.|+||.||+|.+...+. .+++|.+... .....+.+..|..+++.++||||+++++++......++|
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv 77 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS---HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMV 77 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch---hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEE
Confidence 368999999999999865543 4888877543 233456678899999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCc--------EEEEeccCcc
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH--------VSLTDFDLSC 815 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~--------vkL~DFG~a~ 815 (998)
|||+++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+||+++.++. ++++|||++.
T Consensus 78 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 78 QEYVKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred EecCCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 99999999999997653 35899999999999999999999999999999999999987764 6999999874
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcC-CCC
Q 001902 816 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYG-YTP 893 (998)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG-~~P 893 (998)
... ......++..|+|||++.+ ..++.++|||||||++|+|++| .+|
T Consensus 157 ~~~-------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~ 205 (258)
T cd05078 157 TVL-------------------------------PKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKP 205 (258)
T ss_pred ccC-------------------------------CchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence 321 1123457889999999977 4578899999999999999998 566
Q ss_pred CCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 894 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 894 f~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
|...+..... .+......+|. ..+.++.+|+.+||+.||++||| ++++++
T Consensus 206 ~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~Rps----~~~il~ 255 (258)
T cd05078 206 LSALDSQKKL-QFYEDRHQLPA--PKWTELANLINQCMDYEPDFRPS----FRAIIR 255 (258)
T ss_pred hhhccHHHHH-HHHHccccCCC--CCcHHHHHHHHHHhccChhhCCC----HHHHHH
Confidence 6665554433 23333333333 34678999999999999999999 666664
No 358
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=4e-34 Score=307.89 Aligned_cols=233 Identities=32% Similarity=0.477 Sum_probs=190.6
Q ss_pred CCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEecCCCCchhHH
Q 001902 676 GDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLL 755 (998)
Q Consensus 676 G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~ 755 (998)
|.+|.||+|.+..+++.||+|.+.+.. ....|...+....||||+++++++...+..|+||||++|++|.++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS--------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSH 75 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh--------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHH
Confidence 899999999999999999999987642 223344555566799999999999999999999999999999999
Q ss_pred HhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcchhhhhcc
Q 001902 756 LDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRH 835 (998)
Q Consensus 756 l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~ 835 (998)
+.+. ..+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||.+.....
T Consensus 76 l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~---------------- 137 (237)
T cd05576 76 ISKF--LNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVED---------------- 137 (237)
T ss_pred HHHh--cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhcccc----------------
Confidence 8765 3489999999999999999999999999999999999999999999999998743220
Q ss_pred cCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCC
Q 001902 836 KGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPS 915 (998)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~~~~~~~~ 915 (998)
......++..|+|||.+.+..++.++|+||+||++|+|++|..||...... ......+..
T Consensus 138 --------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~------~~~~~~~~~ 197 (237)
T cd05576 138 --------------SCDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG------INTHTTLNI 197 (237)
T ss_pred --------------ccccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh------cccccccCC
Confidence 011224567899999998888999999999999999999999987643211 111111112
Q ss_pred CCCCcHHHHHHHHHccccCccCcCCCh-hcHHHHHcCCCc
Q 001902 916 STPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFF 954 (998)
Q Consensus 916 ~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f 954 (998)
....+..+.+||.+||+.||.+||++. ..+.++++||||
T Consensus 198 ~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 198 PEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred cccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 234678899999999999999999953 236999999998
No 359
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.4e-33 Score=309.36 Aligned_cols=253 Identities=24% Similarity=0.334 Sum_probs=206.1
Q ss_pred ccCCcccccccCCCCceeEEEEEEccC---CeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCe
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 739 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~---~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 739 (998)
...+|.+.+.||.|+||.||+|.+... ...+++|...... .....+.+.+|+.+++.++|+||+++++++.. +.
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~ 80 (270)
T cd05056 4 QREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT--SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NP 80 (270)
T ss_pred chhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CC
Confidence 345789999999999999999987543 4578999876542 24455678899999999999999999998875 55
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCC
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 819 (998)
.|+||||+++++|.+++.... ..++...+..++.||+.||+|||+.|++|+||||+||+++.++.++|+|||++.....
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 81 VWIVMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLED 159 (270)
T ss_pred cEEEEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeeccc
Confidence 789999999999999997643 3589999999999999999999999999999999999999999999999999854321
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCC
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 898 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~ 898 (998)
... .......++..|+|||.+....++.++|||||||++|+|++ |..||.+.+
T Consensus 160 ~~~--------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~ 213 (270)
T cd05056 160 ESY--------------------------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVK 213 (270)
T ss_pred ccc--------------------------eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 100 00112235578999999988889999999999999999985 999999888
Q ss_pred hHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 899 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 899 ~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
.......+.... ..+....++..+.+|+.+||..+|.+||| +.+++.
T Consensus 214 ~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~~~~ 260 (270)
T cd05056 214 NNDVIGRIENGE-RLPMPPNCPPTLYSLMTKCWAYDPSKRPR----FTELKA 260 (270)
T ss_pred HHHHHHHHHcCC-cCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence 777666665543 22334456889999999999999999999 555543
No 360
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=2.6e-33 Score=307.08 Aligned_cols=252 Identities=24% Similarity=0.346 Sum_probs=207.9
Q ss_pred CcccccccCCCCceeEEEEEEcc-CCeEEEEEEeecccc-------cChhHHHHHHHHHHHHHh-CCCCCccceeEEEee
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCG-SGQYFAMKAMDKGVM-------LNRNKVHRACAEREILDM-LDHPFVPALYASFQT 736 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~-~~~~valK~i~~~~~-------~~~~~~~~~~~E~~il~~-l~h~nIv~l~~~~~~ 736 (998)
.|++.+.||+|+||.||++.+.. +++.+|+|.+..... ........+..|+.++.+ ++|+||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 48899999999999999999977 688999998864321 123344567778888865 799999999999999
Q ss_pred CCeEEEEEecCCCCchhHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCcEEEecCCcEEEEeccC
Q 001902 737 KTHVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDL 813 (998)
Q Consensus 737 ~~~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~~LH~-~~IiHrDLkP~NILi~~~g~vkL~DFG~ 813 (998)
++..++||||+++++|.+++.. .....+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||+
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence 9999999999999999988753 233568999999999999999999996 6899999999999999999999999999
Q ss_pred ccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCC
Q 001902 814 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 893 (998)
Q Consensus 814 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~P 893 (998)
+....... ......|+..|+|||++.+..++.++|+||||+++|+|++|.+|
T Consensus 161 ~~~~~~~~----------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p 212 (269)
T cd08528 161 AKQKQPES----------------------------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPP 212 (269)
T ss_pred eeeccccc----------------------------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCc
Confidence 85432110 12234688999999999988899999999999999999999999
Q ss_pred CCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcH
Q 001902 894 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGA 945 (998)
Q Consensus 894 f~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a 945 (998)
|...+.......+.............+..+.+|+.+||..||++||++.+++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~ 264 (269)
T cd08528 213 FYSTNMLSLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVS 264 (269)
T ss_pred ccccCHHHHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHH
Confidence 9887777666666655443333335678999999999999999999944433
No 361
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=2.5e-33 Score=313.28 Aligned_cols=256 Identities=22% Similarity=0.333 Sum_probs=204.9
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCe----EEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 737 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~----~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~ 737 (998)
+...+|+.++.||+|+||.||++.+..++. .+|+|.+.... .......+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~ 81 (303)
T cd05110 4 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP 81 (303)
T ss_pred cchhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC
Confidence 345689999999999999999999877775 56888876432 233344678899999999999999999988754
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
..++++||+++|+|.+++.... ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.+||+|||++...
T Consensus 82 -~~~~v~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 82 -TIQLVTQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (303)
T ss_pred -CceeeehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccc
Confidence 4679999999999999987642 35889999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 896 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~ 896 (998)
...... .......++..|+|||++.+..++.++|||||||++|+|++ |..||.+
T Consensus 160 ~~~~~~-------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~ 214 (303)
T cd05110 160 EGDEKE-------------------------YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDG 214 (303)
T ss_pred cCcccc-------------------------cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 211100 01112345778999999998899999999999999999997 9999987
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHH
Q 001902 897 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 947 (998)
Q Consensus 897 ~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~e 947 (998)
....... .++.....++.....+..+.+++.+||..+|++||++.+++..
T Consensus 215 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 215 IPTREIP-DLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred CCHHHHH-HHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 7654443 3444444444445567889999999999999999995554443
No 362
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-34 Score=331.44 Aligned_cols=259 Identities=28% Similarity=0.417 Sum_probs=226.0
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEe-----eC
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQ-----TK 737 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~-----~~ 737 (998)
.+.|++...||.|.+|.||++.++.+|+..|+|+....... -+.+..|.+|++.+ +|||++.+|++|. ..
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~----deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~ 93 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE----EEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNG 93 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc----cHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCC
Confidence 46799999999999999999999999999999998865332 24566788999888 7999999999986 35
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
+.+|||||||.|||..|+++.-.+..+.++.+..|++.++.||.+||.+.+||||||-.|||++.+|.|||+|||.+...
T Consensus 94 DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQl 173 (953)
T KOG0587|consen 94 DQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 173 (953)
T ss_pred CeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeee
Confidence 78999999999999999999877788999999999999999999999999999999999999999999999999998554
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-----CCCChhHHHHHHHHHHHHHcCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-----GHTSAVDWWALGILLYEMLYGYT 892 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-----~~~~~sDIwSlG~il~eLltG~~ 892 (998)
. .......+.+|||.|||||++... .|+..+|+||||++..||.-|.+
T Consensus 174 d---------------------------sT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~P 226 (953)
T KOG0587|consen 174 D---------------------------STVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAP 226 (953)
T ss_pred e---------------------------cccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCC
Confidence 3 223445678999999999999553 46779999999999999999999
Q ss_pred CCCCCChHHHHHHHHhCCCC-CCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 893 PFRGKTRQKTFANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 893 Pf~~~~~~~~~~~i~~~~~~-~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
|+....+...+..|.+...+ +..+...+.++.+||..||.+|-.+||+ +.++|+|||++..
T Consensus 227 Pl~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~----~~~ll~hpFi~e~ 288 (953)
T KOG0587|consen 227 PLCDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPS----TEELLKHPFITEQ 288 (953)
T ss_pred CccCcchhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcc----hhhhccCCccccc
Confidence 99999998888777765433 3334556889999999999999999999 9999999999954
No 363
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.4e-33 Score=308.93 Aligned_cols=245 Identities=22% Similarity=0.304 Sum_probs=198.7
Q ss_pred cccCCCCceeEEEEEEccCC------eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 671 KPLGSGDTGSVHLVELCGSG------QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~~~------~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
+.||.|+||.||++.+...+ +.+++|.+.... .......+.+|+.+++.++||||+++++++......++||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA--TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIM 78 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc--chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEE
Confidence 36899999999999986443 789999886542 2234567888999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhC-----CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCC-----cEEEEeccCc
Q 001902 745 DYCPGGELFLLLDRQ-----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-----HVSLTDFDLS 814 (998)
Q Consensus 745 E~~~ggsL~~~l~~~-----~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g-----~vkL~DFG~a 814 (998)
||+++++|.+++... ....+++..+..++.||+.||.|||+++++|+||||+||+++.++ .++|+|||++
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158 (269)
T ss_pred eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence 999999999999753 223478899999999999999999999999999999999999887 8999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCC
Q 001902 815 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTP 893 (998)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~P 893 (998)
........ ........++..|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus 159 ~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p 213 (269)
T cd05044 159 RDIYKSDY-------------------------YRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQP 213 (269)
T ss_pred cccccccc-------------------------cccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCC
Confidence 54321100 001122345778999999999999999999999999999998 9999
Q ss_pred CCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChh
Q 001902 894 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 943 (998)
Q Consensus 894 f~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 943 (998)
|...+.......+.... .+......+..+.+|+.+||..+|.+||++.+
T Consensus 214 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 262 (269)
T cd05044 214 YPALNNQEVLQHVTAGG-RLQKPENCPDKIYQLMTNCWAQDPSERPTFDR 262 (269)
T ss_pred CcccCHHHHHHHHhcCC-ccCCcccchHHHHHHHHHHcCCCcccCCCHHH
Confidence 98877766655554332 22333446788999999999999999999444
No 364
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=4.2e-33 Score=305.51 Aligned_cols=245 Identities=21% Similarity=0.310 Sum_probs=190.6
Q ss_pred cccCCCCceeEEEEEEcc--CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEecCC
Q 001902 671 KPLGSGDTGSVHLVELCG--SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCP 748 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~--~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ 748 (998)
+.||+|+||.||+|.... ....+++|.+.... .......+.+|+.+++.++|+||+++++.+......|+||||++
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCP 78 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCC
Confidence 368999999999997532 34578888776432 23345567889999999999999999999999999999999999
Q ss_pred CCchhHHHhhCCC---CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCC
Q 001902 749 GGELFLLLDRQPT---KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 825 (998)
Q Consensus 749 ggsL~~~l~~~~~---~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 825 (998)
+++|.+++..... ...+...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++........
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~--- 155 (269)
T cd05042 79 LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY--- 155 (269)
T ss_pred CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchh---
Confidence 9999999976432 2346778899999999999999999999999999999999999999999998843211000
Q ss_pred CcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-------CCCCChhHHHHHHHHHHHHHc-CCCCCCCC
Q 001902 826 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-------AGHTSAVDWWALGILLYEMLY-GYTPFRGK 897 (998)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-------~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~ 897 (998)
........+++.|+|||++.. ..++.++|||||||++|+|++ |..||...
T Consensus 156 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~ 213 (269)
T cd05042 156 ----------------------YITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDL 213 (269)
T ss_pred ----------------------eeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcC
Confidence 001123346778999999743 356779999999999999998 88999887
Q ss_pred ChHHHHHHHHhCC-CCCCC---CCCCcHHHHHHHHHccccCccCcCCChh
Q 001902 898 TRQKTFANILHKD-LKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHE 943 (998)
Q Consensus 898 ~~~~~~~~i~~~~-~~~~~---~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 943 (998)
.....+..+.... ..++. ....+..+.+++..|+ .||.+||++.+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~ 262 (269)
T cd05042 214 SDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEE 262 (269)
T ss_pred CHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHH
Confidence 7766666555432 22222 2346778889999998 59999999443
No 365
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-34 Score=343.50 Aligned_cols=257 Identities=21% Similarity=0.342 Sum_probs=216.6
Q ss_pred cCCcccccccCCCCceeEEEEEEccCC-----eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSG-----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 738 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~-----~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 738 (998)
.....+.+.||+|+||.||.+...... ..||+|.+++ ..+......|.+|..+|+.++|||||++++++....
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~--~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~ 768 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKR--LSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSG 768 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccc--cCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCC
Confidence 345677789999999999999985442 3488888875 346778899999999999999999999999999999
Q ss_pred eEEEEEecCCCCchhHHHhhC-----CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccC
Q 001902 739 HVCLITDYCPGGELFLLLDRQ-----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 813 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~-----~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~ 813 (998)
..+|++|||+||+|..+|+.. ....++...+..++.+|++|+.||+++++|||||...|+|++....|||+|||+
T Consensus 769 ~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGl 848 (1025)
T KOG1095|consen 769 PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGL 848 (1025)
T ss_pred CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccch
Confidence 999999999999999999864 134599999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCC
Q 001902 814 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYT 892 (998)
Q Consensus 814 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~ 892 (998)
|+.+....- . +......-...|||||.+....++.++||||||++|||+++ |..
T Consensus 849 ArDiy~~~y------y-------------------r~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~ 903 (1025)
T KOG1095|consen 849 ARDIYDKDY------Y-------------------RKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGAT 903 (1025)
T ss_pred hHhhhhchh------e-------------------eccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCC
Confidence 974321100 0 00001112357999999999999999999999999999998 999
Q ss_pred CCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHH
Q 001902 893 PFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 948 (998)
Q Consensus 893 Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~el 948 (998)
||.+.++.+.+.....+. .++....++..+.++|..||+.+|++||+|..+++++
T Consensus 904 PY~~~~n~~v~~~~~~gg-RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~ 958 (1025)
T KOG1095|consen 904 PYPSRSNFEVLLDVLEGG-RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQD 958 (1025)
T ss_pred CCCCcchHHHHHHHHhCC-ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhh
Confidence 999999999988777665 5566667788899999999999999999977665543
No 366
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=3.1e-33 Score=305.68 Aligned_cols=239 Identities=21% Similarity=0.299 Sum_probs=190.0
Q ss_pred cccCCCCceeEEEEEEcc------------CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC
Q 001902 671 KPLGSGDTGSVHLVELCG------------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 738 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~------------~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 738 (998)
+.||+|+||.||++.... ....+++|.+... .......+..|+.+++.++||||+++++++....
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~ 77 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS---HRDISLAFFETASMMRQVSHKHIVLLYGVCVRDV 77 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh---hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 368999999999998532 2336888887643 2334456778899999999999999999999999
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCc-------EEEEec
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH-------VSLTDF 811 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~-------vkL~DF 811 (998)
..++||||+++++|..++.+.. ..+++..+..++.||+.||+|||++||+||||||+|||++.++. ++++||
T Consensus 78 ~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 78 ENIMVEEFVEFGPLDLFMHRKS-DVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred CCEEEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 9999999999999998886543 45899999999999999999999999999999999999987664 899999
Q ss_pred cCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhc-CCCCCChhHHHHHHHHHHHHH-c
Q 001902 812 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-GAGHTSAVDWWALGILLYEML-Y 889 (998)
Q Consensus 812 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~sDIwSlG~il~eLl-t 889 (998)
|++.... ......|+..|+|||.+. +..++.++|||||||++|+|+ .
T Consensus 157 g~~~~~~-------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~ 205 (262)
T cd05077 157 GIPITVL-------------------------------SRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYN 205 (262)
T ss_pred CCCcccc-------------------------------CcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhC
Confidence 9874321 112235788999999986 466888999999999999998 5
Q ss_pred CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 890 GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 890 G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
|..||......+.. .+...... ...+.+.++.+||.+||+.||.+||+ ..+|+++
T Consensus 206 ~~~p~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~li~~cl~~dp~~Rp~----~~~il~~ 260 (262)
T cd05077 206 GEIPLKDKTLAEKE-RFYEGQCM--LVTPSCKELADLMTHCMNYDPNQRPF----FRAIMRD 260 (262)
T ss_pred CCCCCCCcchhHHH-HHHhcCcc--CCCCChHHHHHHHHHHcCCChhhCcC----HHHHHHh
Confidence 89998776543332 23333222 22334578899999999999999999 6666654
No 367
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=1.6e-34 Score=286.57 Aligned_cols=255 Identities=25% Similarity=0.409 Sum_probs=210.7
Q ss_pred ccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCccceeEEEee--CCe
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQT--KTH 739 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~--~~~ 739 (998)
+.++|++++++|+|.++.||.+.+..++..|++|++++ ...+.+.+|+.||..|. ||||+++++...+ ...
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP------VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt 109 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP------VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT 109 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeech------HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence 35789999999999999999999999999999999875 35678899999999995 9999999999875 456
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec-CCcEEEEeccCccccC
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTS 818 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~-~g~vkL~DFG~a~~~~ 818 (998)
..||+||+++.++..+... ++.-.++.++.+|+.||.|||++||+|||+||.|++|+. ...++|+|+|+|....
T Consensus 110 paLiFE~v~n~Dfk~ly~t-----l~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYH 184 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLYPT-----LTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 184 (338)
T ss_pred chhHhhhhccccHHHHhhh-----hchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcC
Confidence 7899999999888887644 888999999999999999999999999999999999995 4579999999995532
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCC-C
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFR-G 896 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~-~ 896 (998)
+....+-.+.+.+|--||.+.. ..|+..-|+|||||+|..|+..+.||. |
T Consensus 185 ----------------------------p~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG 236 (338)
T KOG0668|consen 185 ----------------------------PGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHG 236 (338)
T ss_pred ----------------------------CCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCC
Confidence 1222334467889999999966 567889999999999999999887764 5
Q ss_pred CChHHHHHHHHhC-------------CCCC---------------------CCC-CCCcHHHHHHHHHccccCccCcCCC
Q 001902 897 KTRQKTFANILHK-------------DLKF---------------------PSS-TPTSLHAKQLMYRLLHRDPKSRLGS 941 (998)
Q Consensus 897 ~~~~~~~~~i~~~-------------~~~~---------------------~~~-~~~s~~l~~Ll~~~L~~dP~~Rpt~ 941 (998)
.++.+++.+|.+- .+.+ +.. .-.++++.+||.++|..|..+|+|
T Consensus 237 ~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlT- 315 (338)
T KOG0668|consen 237 HDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLT- 315 (338)
T ss_pred CCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccc-
Confidence 5666666655431 1111 111 224689999999999999999999
Q ss_pred hhcHHHHHcCCCccCCChh
Q 001902 942 HEGANEIKKHPFFKGVNWA 960 (998)
Q Consensus 942 ~~~a~elL~Hp~f~~~~~~ 960 (998)
|.+++.||||..+.-+
T Consensus 316 ---akEam~HpyF~~~~~~ 331 (338)
T KOG0668|consen 316 ---AKEAMAHPYFAPVREA 331 (338)
T ss_pred ---hHHHhcCchHHHHHHH
Confidence 9999999999986433
No 368
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=2.6e-33 Score=309.14 Aligned_cols=256 Identities=23% Similarity=0.343 Sum_probs=205.3
Q ss_pred CCcccccccCCCCceeEEEEEEc----cCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEee--CC
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELC----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KT 738 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~----~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~ 738 (998)
..|++.+.||+|+||.||++... .+++.+|+|++...... .....+.+|+.+++.++|+||+++++++.. ..
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~ 81 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGR 81 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCC
Confidence 57889999999999999999864 34889999999865322 356778899999999999999999998877 56
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccC
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 818 (998)
..++||||+++++|.+++.... ..++...+..++.||+.||+|||++||+|+||||+||+++.++.++|+|||.+....
T Consensus 82 ~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 82 SLRLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLP 160 (284)
T ss_pred ceEEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence 8999999999999999997653 358999999999999999999999999999999999999999999999999985543
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 898 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~ 898 (998)
..... ........++..|+|||.+.+..++.++|||||||++|+|++|..||....
T Consensus 161 ~~~~~------------------------~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~ 216 (284)
T cd05038 161 EDKDY------------------------YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPP 216 (284)
T ss_pred cCCcc------------------------eeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCccccc
Confidence 11100 000111235567999999988889999999999999999999999986542
Q ss_pred hH--------------HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHH
Q 001902 899 RQ--------------KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 947 (998)
Q Consensus 899 ~~--------------~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~e 947 (998)
.. ......+......+....++.++.+|+.+||..+|.+||++.+++..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 279 (284)
T cd05038 217 AEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILI 279 (284)
T ss_pred chhccccccccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence 21 22233344444445455567889999999999999999995544443
No 369
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=5.8e-33 Score=302.91 Aligned_cols=249 Identities=19% Similarity=0.264 Sum_probs=196.2
Q ss_pred cccCCCCceeEEEEEEcc---CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEe-eCCeEEEEEec
Q 001902 671 KPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ-TKTHVCLITDY 746 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~---~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~-~~~~~~lV~E~ 746 (998)
+.||+|+||.||+|.+.. .+..+|+|.+... ........+..|+.+++.++||||+++++++. .++..++||||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 78 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI--TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPY 78 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc--CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEec
Confidence 468999999999998743 3568999987532 23345567888999999999999999999765 46678999999
Q ss_pred CCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCC
Q 001902 747 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 826 (998)
Q Consensus 747 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~ 826 (998)
+.+++|.+++.+.. ..++...+..++.||+.||.|||+.+|+||||||+|||++.++.+||+|||++........
T Consensus 79 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~---- 153 (262)
T cd05058 79 MKHGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEY---- 153 (262)
T ss_pred CCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcc----
Confidence 99999999997643 3467788889999999999999999999999999999999999999999999854321100
Q ss_pred cchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHH
Q 001902 827 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFAN 905 (998)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~~~~~~ 905 (998)
..........++..|+|||.+.+..++.++|||||||++|+|++ |.+||...+.......
T Consensus 154 -------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~ 214 (262)
T cd05058 154 -------------------YSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVY 214 (262)
T ss_pred -------------------eeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 00011123346778999999988889999999999999999999 5777877776666655
Q ss_pred HHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 906 ILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 906 i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
+.... ..+.....+..+.+++.+||..+|++||+ +.++++
T Consensus 215 ~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rp~----~~~il~ 254 (262)
T cd05058 215 LLQGR-RLLQPEYCPDPLYEVMLSCWHPKPEMRPT----FSELVS 254 (262)
T ss_pred HhcCC-CCCCCCcCCHHHHHHHHHHcCCChhhCCC----HHHHHH
Confidence 55442 22223345778999999999999999999 555543
No 370
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=5e-33 Score=305.00 Aligned_cols=245 Identities=22% Similarity=0.313 Sum_probs=190.6
Q ss_pred cccCCCCceeEEEEEEc--cCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEecCC
Q 001902 671 KPLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCP 748 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~--~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ 748 (998)
+.||+|+||.||+|... .++..+|+|.++... .......+.+|+.+++.++||||+++++++.....+++||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSA--SVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCP 78 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCC
Confidence 46899999999999864 356789999887542 22334567889999999999999999999999999999999999
Q ss_pred CCchhHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCC
Q 001902 749 GGELFLLLDRQP---TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 825 (998)
Q Consensus 749 ggsL~~~l~~~~---~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 825 (998)
+++|.+++.... ...++...+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++........
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~--- 155 (269)
T cd05087 79 LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY--- 155 (269)
T ss_pred CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcce---
Confidence 999999997532 22466778889999999999999999999999999999999999999999999854221100
Q ss_pred CcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-------CCCChhHHHHHHHHHHHHHc-CCCCCCCC
Q 001902 826 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-------GHTSAVDWWALGILLYEMLY-GYTPFRGK 897 (998)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-------~~~~~sDIwSlG~il~eLlt-G~~Pf~~~ 897 (998)
........|+..|+|||++.+. .++.++|||||||++|+|++ |..||...
T Consensus 156 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~ 213 (269)
T cd05087 156 ----------------------YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHL 213 (269)
T ss_pred ----------------------eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCC
Confidence 0111234578899999998642 35779999999999999996 99999877
Q ss_pred ChHHHHHHHHhC-CCCCCCC---CCCcHHHHHHHHHccccCccCcCCChh
Q 001902 898 TRQKTFANILHK-DLKFPSS---TPTSLHAKQLMYRLLHRDPKSRLGSHE 943 (998)
Q Consensus 898 ~~~~~~~~i~~~-~~~~~~~---~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 943 (998)
............ ....+.. ...+..+.+++.+|+ .+|++|||+.+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~ 262 (269)
T cd05087 214 SDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEE 262 (269)
T ss_pred ChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHH
Confidence 665554433322 2222221 235678899999998 58999999433
No 371
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=3.8e-33 Score=307.14 Aligned_cols=238 Identities=19% Similarity=0.297 Sum_probs=189.0
Q ss_pred ccCCCCceeEEEEEEccC------------------------CeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCc
Q 001902 672 PLGSGDTGSVHLVELCGS------------------------GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFV 727 (998)
Q Consensus 672 ~LG~G~~g~Vy~a~~~~~------------------------~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nI 727 (998)
.||+|+||.||++....+ ...+++|++... .......+..|+.+++.++||||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~ni 78 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS---HRDIALAFFETASLMSQVSHIHL 78 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH---HHHHHHHHHHHHHHHhcCCCCCe
Confidence 689999999999975322 245888887643 22334567788999999999999
Q ss_pred cceeEEEeeCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCC---
Q 001902 728 PALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG--- 804 (998)
Q Consensus 728 v~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g--- 804 (998)
+++++++......++||||+++++|..++.+. ...+++..+..++.||+.||+|||++||+||||||+|||++..+
T Consensus 79 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 79 AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred eeEEEEEEeCCceEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCccc
Confidence 99999999999999999999999999988654 34589999999999999999999999999999999999998644
Q ss_pred ----cEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHH
Q 001902 805 ----HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWA 879 (998)
Q Consensus 805 ----~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwS 879 (998)
.++|+|||.+.... ......++..|+|||.+.+ ..++.++||||
T Consensus 158 ~~~~~~kl~d~g~~~~~~-------------------------------~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~s 206 (274)
T cd05076 158 GTSPFIKLSDPGVSFTAL-------------------------------SREERVERIPWIAPECVPGGNSLSTAADKWS 206 (274)
T ss_pred CccceeeecCCccccccc-------------------------------cccccccCCcccCchhhcCCCCCCcHHHHHH
Confidence 48999999874321 0012247788999999866 56789999999
Q ss_pred HHHHHHHHH-cCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 880 LGILLYEML-YGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 880 lG~il~eLl-tG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
|||++|+|+ +|..||.......... ........+. ..+..+.+||.+||+.+|.+||+ +.+++++
T Consensus 207 lG~~l~el~~~g~~p~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~li~~cl~~~p~~Rps----~~~il~~ 272 (274)
T cd05076 207 FGTTLLEICFDGEVPLKERTPSEKER-FYEKKHRLPE--PSCKELATLISQCLTYEPTQRPS----FRTILRD 272 (274)
T ss_pred HHHHHHHHHhCCCCCccccChHHHHH-HHHhccCCCC--CCChHHHHHHHHHcccChhhCcC----HHHHHHh
Confidence 999999995 7999998766544332 2333223332 34568999999999999999999 6666654
No 372
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=5.9e-33 Score=301.97 Aligned_cols=236 Identities=19% Similarity=0.261 Sum_probs=190.1
Q ss_pred cccCCCCceeEEEEEEccCC----------eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 671 KPLGSGDTGSVHLVELCGSG----------QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~~~----------~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
+.||+|+||.||++.+..++ ..+++|.+.... .....+.+|+.+++.++||||+++++++.. ...
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 75 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH----RDSLAFFETASLMSQLSHKHLVKLYGVCVR-DEN 75 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch----hhHHHHHHHHHHHHcCCCcchhheeeEEec-CCc
Confidence 36899999999999997766 357788766432 115677889999999999999999999888 778
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCC-------cEEEEeccC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-------HVSLTDFDL 813 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g-------~vkL~DFG~ 813 (998)
++||||+++++|.+++..... .++...+..++.||+.||+|||++||+||||||+|||++.++ .++|+|||+
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 76 IMVEEYVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred EEEEEcCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 999999999999999987532 589999999999999999999999999999999999999887 799999999
Q ss_pred ccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC--CCCChhHHHHHHHHHHHHHc-C
Q 001902 814 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA--GHTSAVDWWALGILLYEMLY-G 890 (998)
Q Consensus 814 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~--~~~~~sDIwSlG~il~eLlt-G 890 (998)
+..... .....++..|+|||++.+. .++.++|||||||++|+|++ |
T Consensus 155 a~~~~~-------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~ 203 (259)
T cd05037 155 PITVLS-------------------------------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNG 203 (259)
T ss_pred cccccc-------------------------------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCC
Confidence 854321 1123467789999999876 78899999999999999998 6
Q ss_pred CCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 891 YTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 891 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
..||...+.......... ....+ ......+.+|+.+||..+|.+||+ +.++++
T Consensus 204 ~~p~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~li~~~l~~~p~~Rpt----~~~il~ 256 (259)
T cd05037 204 EEPLSTLSSSEKERFYQD-QHRLP--MPDCAELANLINQCWTYDPTKRPS----FRAILR 256 (259)
T ss_pred CCCcccCCchhHHHHHhc-CCCCC--CCCchHHHHHHHHHhccChhhCCC----HHHHHH
Confidence 888877654333333222 11111 122368899999999999999999 555553
No 373
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=7.9e-33 Score=303.76 Aligned_cols=253 Identities=23% Similarity=0.341 Sum_probs=202.3
Q ss_pred cccccccCCCCceeEEEEEEc---cCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC-----
Q 001902 667 FRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----- 738 (998)
Q Consensus 667 y~~~~~LG~G~~g~Vy~a~~~---~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~----- 738 (998)
|.+.+.||+|+||.||+|.+. .+++.+|+|++..... .......+.+|+.+++.++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 79 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIF-SSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRL 79 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccC-ChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcc
Confidence 677889999999999999864 3578999999976532 3344667889999999999999999999886432
Q ss_pred -eEEEEEecCCCCchhHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccC
Q 001902 739 -HVCLITDYCPGGELFLLLDRQ----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 813 (998)
Q Consensus 739 -~~~lV~E~~~ggsL~~~l~~~----~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~ 813 (998)
..+++++|+.+++|.+++... ....++...+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~ 159 (273)
T cd05074 80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGL 159 (273)
T ss_pred cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccc
Confidence 357899999999998887532 122478899999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCC
Q 001902 814 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYT 892 (998)
Q Consensus 814 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~ 892 (998)
+........ ........+++.|++||.+....++.++|||||||++|+|++ |.+
T Consensus 160 ~~~~~~~~~-------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~ 214 (273)
T cd05074 160 SKKIYSGDY-------------------------YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQT 214 (273)
T ss_pred cccccCCcc-------------------------eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCC
Confidence 864321110 001112345678999999998889999999999999999998 999
Q ss_pred CCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 893 PFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 893 Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
||.+.+....+..+.... ........+..+.+++.+||..+|.+||+ +.+++.
T Consensus 215 p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~p~~Rps----~~~~~~ 267 (273)
T cd05074 215 PYAGVENSEIYNYLIKGN-RLKQPPDCLEDVYELMCQCWSPEPKCRPS----FQHLRD 267 (273)
T ss_pred CCCCCCHHHHHHHHHcCC-cCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence 998887776666665543 22223346788999999999999999999 555543
No 374
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.4e-35 Score=293.66 Aligned_cols=265 Identities=25% Similarity=0.372 Sum_probs=213.2
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEee-----
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT----- 736 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~----- 736 (998)
...+.|+-+.+||+|.||.||+|+.+.+|+.||+|.+-.+.. .........+|+.+|..|+|+|++.+++.+..
T Consensus 14 ~~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmene-KeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~ 92 (376)
T KOG0669|consen 14 DEVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNLIEICRTKATPT 92 (376)
T ss_pred ecchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhcc-ccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCc
Confidence 345789999999999999999999999999999986643211 11223455779999999999999999887742
Q ss_pred ---CCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccC
Q 001902 737 ---KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 813 (998)
Q Consensus 737 ---~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~ 813 (998)
...+|+||.+| ..+|..++... ...++...+++++.+++.||.|+|.+.|+|||+||.|+||+.+|.+||+|||+
T Consensus 93 ~r~r~t~ylVf~~c-ehDLaGlLsn~-~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGl 170 (376)
T KOG0669|consen 93 NRDRATFYLVFDFC-EHDLAGLLSNR-KVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGL 170 (376)
T ss_pred ccccceeeeeHHHh-hhhHHHHhcCc-cccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeecccc
Confidence 23589999999 67888888654 24599999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCC
Q 001902 814 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYT 892 (998)
Q Consensus 814 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~ 892 (998)
++.++.......| ..+..+.|++|.+||.+.+. .|+++.|||..|||+.+|++|.+
T Consensus 171 ar~fs~~~n~~kp-----------------------rytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrsp 227 (376)
T KOG0669|consen 171 ARAFSTSKNVVKP-----------------------RYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSP 227 (376)
T ss_pred ccceecccccCCC-----------------------CcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCc
Confidence 9776543332211 13455789999999999884 68899999999999999999999
Q ss_pred CCCCCChHHHHHHHHh--CCCC---CCC-----------------C-----------CCCcHHHHHHHHHccccCccCcC
Q 001902 893 PFRGKTRQKTFANILH--KDLK---FPS-----------------S-----------TPTSLHAKQLMYRLLHRDPKSRL 939 (998)
Q Consensus 893 Pf~~~~~~~~~~~i~~--~~~~---~~~-----------------~-----------~~~s~~l~~Ll~~~L~~dP~~Rp 939 (998)
-|.+.+....+..|.. +.+. ||. . -.-+.++.+|+.+||..||.+|+
T Consensus 228 imqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~ 307 (376)
T KOG0669|consen 228 IMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRI 307 (376)
T ss_pred cccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCc
Confidence 9999888777766643 1110 110 0 00133667999999999999999
Q ss_pred CChhcHHHHHcCCCccC
Q 001902 940 GSHEGANEIKKHPFFKG 956 (998)
Q Consensus 940 t~~~~a~elL~Hp~f~~ 956 (998)
+ +.++|+|.||..
T Consensus 308 ~----ad~alnh~~F~k 320 (376)
T KOG0669|consen 308 D----ADQALNHDFFWK 320 (376)
T ss_pred c----hHhhhchhhhhc
Confidence 9 999999999986
No 375
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=2.3e-32 Score=304.20 Aligned_cols=259 Identities=16% Similarity=0.170 Sum_probs=189.9
Q ss_pred cccCCcccccccCCCCceeEEEEEEccC---CeEEEEEEeecccccChhH--------HHHHHHHHHHHHhCCCCCccce
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNK--------VHRACAEREILDMLDHPFVPAL 730 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~---~~~valK~i~~~~~~~~~~--------~~~~~~E~~il~~l~h~nIv~l 730 (998)
+...+|++.+.||+|+||.||+|.+..+ +..+|+|+........... ......+...+..++|++|+++
T Consensus 9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~ 88 (294)
T PHA02882 9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKY 88 (294)
T ss_pred cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcE
Confidence 4457899999999999999999998777 6778888644221110000 0111223344556789999999
Q ss_pred eEEEeeCC----eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcE
Q 001902 731 YASFQTKT----HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHV 806 (998)
Q Consensus 731 ~~~~~~~~----~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~v 806 (998)
++++.... ..+++|+++ ..++.+++... ...++..+..++.||+.||.|||+++|+||||||+|||++.++.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~ 165 (294)
T PHA02882 89 YGCGSFKRCRMYYRFILLEKL-VENTKEIFKRI--KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRG 165 (294)
T ss_pred EEeeeEecCCceEEEEEEehh-ccCHHHHHHhh--ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcE
Confidence 98765443 457889988 55777776653 236788899999999999999999999999999999999999999
Q ss_pred EEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHH
Q 001902 807 SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYE 886 (998)
Q Consensus 807 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~e 886 (998)
+|+|||+|.......... ...........||+.|+|||++.+..++.++|||||||++|+
T Consensus 166 ~l~DFGla~~~~~~~~~~--------------------~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~e 225 (294)
T PHA02882 166 YIIDYGIASHFIIHGKHI--------------------EYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLK 225 (294)
T ss_pred EEEEcCCceeeccCCccc--------------------ccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 999999986543111100 000111233569999999999999999999999999999999
Q ss_pred HHcCCCCCCCCCh-HH--------HHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 887 MLYGYTPFRGKTR-QK--------TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 887 LltG~~Pf~~~~~-~~--------~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
|++|.+||.+... .. .+..+....... ...+..+.+++..|+..+|.+||+ ..+|++
T Consensus 226 l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~rp~----~~~l~~ 291 (294)
T PHA02882 226 WAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKIKI---KNANKFIYDFIECVTKLSYEEKPD----YDALIK 291 (294)
T ss_pred HHhCCCCCCccccchHHHHHhHHHHHHHhhhhhhcc---CCCCHHHHHHHHHHHhCCCCCCCC----HHHHHH
Confidence 9999999987632 21 122222222222 234678999999999999999999 665543
No 376
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=3.3e-32 Score=298.48 Aligned_cols=247 Identities=18% Similarity=0.298 Sum_probs=191.4
Q ss_pred cccCCCCceeEEEEEEccC--CeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEecCC
Q 001902 671 KPLGSGDTGSVHLVELCGS--GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCP 748 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~~--~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ 748 (998)
+.||+|+||.||++..... ...+++|.+.... .......+.+|+.+++.++||||+++++.+......|+||||++
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANA--SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCE 78 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCC--ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCC
Confidence 3689999999999976433 3456677665432 23345678899999999999999999999999999999999999
Q ss_pred CCchhHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCC
Q 001902 749 GGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 826 (998)
Q Consensus 749 ggsL~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~ 826 (998)
+++|.+++.+.. ...++...++.++.||+.||+|||+++++||||||+|||++.++.++|+|||++........
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~---- 154 (268)
T cd05086 79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY---- 154 (268)
T ss_pred CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchh----
Confidence 999999997642 23467778889999999999999999999999999999999999999999998743211000
Q ss_pred cchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-------CCCCChhHHHHHHHHHHHHHc-CCCCCCCCC
Q 001902 827 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-------AGHTSAVDWWALGILLYEMLY-GYTPFRGKT 898 (998)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-------~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~ 898 (998)
........|+..|+|||++.. ..++.++|||||||++|+|++ |..||....
T Consensus 155 ---------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~ 213 (268)
T cd05086 155 ---------------------IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLS 213 (268)
T ss_pred ---------------------hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Confidence 011124568899999999743 245679999999999999996 678998877
Q ss_pred hHHHHHHHHhCC-CCCC---CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHH
Q 001902 899 RQKTFANILHKD-LKFP---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 949 (998)
Q Consensus 899 ~~~~~~~i~~~~-~~~~---~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL 949 (998)
..+.+..+.... ...+ .....+..+.+++..|+ .+|.+||+ +.+++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~----~~~i~ 263 (268)
T cd05086 214 DREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRAT----AEEVH 263 (268)
T ss_pred HHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCC----HHHHH
Confidence 777776665442 2211 12346778899999999 68999999 55554
No 377
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-33 Score=303.17 Aligned_cols=142 Identities=29% Similarity=0.435 Sum_probs=124.5
Q ss_pred hhccccccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-----C---CC
Q 001902 655 ILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-----H---PF 726 (998)
Q Consensus 655 ~~~~~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~-----h---~n 726 (998)
.+..|+.++.++|.+.++||+|.|++||+|.|..+.+.||+|+++.. ..-.+....||++|++++ | ..
T Consensus 68 pV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA----qhYtEaAlDEIklL~~v~~~Dp~~~~~~~ 143 (590)
T KOG1290|consen 68 PVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA----QHYTEAALDEIKLLQQVREGDPNDPGKKC 143 (590)
T ss_pred eeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh----hHHHHHHHHHHHHHHHHHhcCCCCCCCce
Confidence 34557778889999999999999999999999999999999998853 334456778999999983 2 47
Q ss_pred ccceeEEEe----eCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCcEEEe
Q 001902 727 VPALYASFQ----TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQ 801 (998)
Q Consensus 727 Iv~l~~~~~----~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-~IiHrDLkP~NILi~ 801 (998)
||++++.|. ++.++|+|+|++ |..|..++.......++...++.|++|||.||.|||.. ||||-||||+|||+.
T Consensus 144 VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 144 VVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred eeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 999999996 456999999999 99999999887777899999999999999999999975 999999999999995
No 378
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3e-33 Score=314.14 Aligned_cols=257 Identities=21% Similarity=0.295 Sum_probs=220.1
Q ss_pred cCCcccccccCCCCceeEEEEEEccC-C--eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGS-G--QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~-~--~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
..+.++.+.||+|.||.|+.+.+... | ..||||+++.+.... ....|.+|..+|.+|+|+|++++|++..+ ...
T Consensus 109 ee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~--~mddflrEas~M~~L~H~hliRLyGvVl~-qp~ 185 (1039)
T KOG0199|consen 109 EEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA--IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPA 185 (1039)
T ss_pred HHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch--hHHHHHHHHHHHHhccCcceeEEeeeecc-chh
Confidence 45677889999999999999998543 3 468999998765433 67899999999999999999999999988 678
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
.+|||++++|+|.+.|++.....|....+..|+.||+.||.||..+++|||||-..|+|+-....|||+|||+.+.++..
T Consensus 186 mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~n 265 (1039)
T KOG0199|consen 186 MMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGEN 265 (1039)
T ss_pred hHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCC
Confidence 89999999999999999866778999999999999999999999999999999999999999999999999999876533
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCCh
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 899 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~ 899 (998)
...+ ......--...|+|||.|....++.++|||+||++||||++ |+.||.+...
T Consensus 266 ed~Y------------------------vm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g 321 (1039)
T KOG0199|consen 266 EDMY------------------------VMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG 321 (1039)
T ss_pred Ccce------------------------EecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH
Confidence 3221 11112234567999999999999999999999999999996 9999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHH
Q 001902 900 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 948 (998)
Q Consensus 900 ~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~el 948 (998)
..++.+|- ..-.++....++..+.+++..||..+|.+||||..+.++.
T Consensus 322 ~qIL~~iD-~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 322 IQILKNID-AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred HHHHHhcc-ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 99999887 4445667777899999999999999999999966544333
No 379
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=1.4e-32 Score=329.23 Aligned_cols=263 Identities=17% Similarity=0.216 Sum_probs=182.0
Q ss_pred cccCCcccccccCCCCceeEEEEEEccC----CeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEE----
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGS----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYAS---- 733 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~----~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~---- 733 (998)
+..++|.+.+.||+|+||.||+|.+..+ +..||+|.+..... .....++ .++...+.++..+...
T Consensus 129 ~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-----~e~~~~e--~l~~~~~~~~~~~~~~~~~~ 201 (566)
T PLN03225 129 FKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-----VEIWMNE--RVRRACPNSCADFVYGFLEP 201 (566)
T ss_pred CccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch-----hHHHHHH--HHHhhchhhHHHHHHhhhcc
Confidence 3467899999999999999999999888 89999998764211 1111111 1122222222222211
Q ss_pred --EeeCCeEEEEEecCCCCchhHHHhhCCCC------------------CCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q 001902 734 --FQTKTHVCLITDYCPGGELFLLLDRQPTK------------------VLKEDAVRFYAAEVVVALEYLHCQGIIYRDL 793 (998)
Q Consensus 734 --~~~~~~~~lV~E~~~ggsL~~~l~~~~~~------------------~l~~~~~~~i~~qil~aL~~LH~~~IiHrDL 793 (998)
.......+|||||+++++|.+++...... ......+..++.||+.||.|||++||+||||
T Consensus 202 ~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDL 281 (566)
T PLN03225 202 VSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDV 281 (566)
T ss_pred cccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcC
Confidence 23566899999999999999998753211 1123456789999999999999999999999
Q ss_pred CCCcEEEec-CCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCC--
Q 001902 794 KPENVLLQG-NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-- 870 (998)
Q Consensus 794 kP~NILi~~-~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-- 870 (998)
||+|||++. ++.+||+|||+|+.+.... .......+|++.|||||.+....
T Consensus 282 KP~NILl~~~~~~~KL~DFGlA~~l~~~~--------------------------~~~~~~~~~t~~Y~APE~~~~~~~~ 335 (566)
T PLN03225 282 KPQNIIFSEGSGSFKIIDLGAAADLRVGI--------------------------NYIPKEFLLDPRYAAPEQYIMSTQT 335 (566)
T ss_pred CHHHEEEeCCCCcEEEEeCCCcccccccc--------------------------ccCCcccccCCCccChHHhhccCCC
Confidence 999999996 5899999999996432110 01123457899999999764332
Q ss_pred --------------------CCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHh-CCCCC----------------
Q 001902 871 --------------------HTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH-KDLKF---------------- 913 (998)
Q Consensus 871 --------------------~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~-~~~~~---------------- 913 (998)
++.++|||||||+||+|+++..|+.. ....+...+. ....+
T Consensus 336 ~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 413 (566)
T PLN03225 336 PSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDS--NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLR 413 (566)
T ss_pred CCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCch--HHHHHHHHHHhcCCcHHHHHHhhccccchhhh
Confidence 33456999999999999997766543 2222222211 11100
Q ss_pred ---CCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhhh
Q 001902 914 ---PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVR 963 (998)
Q Consensus 914 ---~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~ 963 (998)
......+..+.+||.+||+.||.+||| +.++|+||||++..+..+.
T Consensus 414 ~~~~~~d~~~~~~~dLi~~mL~~dP~kR~t----a~e~L~Hpff~~~~~~~~~ 462 (566)
T PLN03225 414 RGFEVLDLDGGAGWELLKSMMRFKGRQRIS----AKAALAHPYFDREGLLGLS 462 (566)
T ss_pred hhhhhccccchHHHHHHHHHccCCcccCCC----HHHHhCCcCcCCCCccccc
Confidence 000112234568999999999999999 9999999999998776543
No 380
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-33 Score=316.94 Aligned_cols=244 Identities=31% Similarity=0.447 Sum_probs=195.9
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC------Ce
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------TH 739 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------~~ 739 (998)
-+..-+.||+|+||.||+++++.+|+.+|+|.+.+.. .....+....|+++|++++|+|||+++++-.+. ..
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~--~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~ 91 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES--SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRL 91 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhc--ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCccccc
Confidence 4566688999999999999999999999999998654 445567888999999999999999999876543 36
Q ss_pred EEEEEecCCCCchhHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec--CC--cEEEEeccCc
Q 001902 740 VCLITDYCPGGELFLLLDRQ-PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG--NG--HVSLTDFDLS 814 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~-~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~--~g--~vkL~DFG~a 814 (998)
..+|||||.||+|..+|.+- ....|++..+..++.++..||.|||.+|||||||||.||++-. +| ..||+|||.|
T Consensus 92 ~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 92 PVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred ceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 78999999999999999752 2345999999999999999999999999999999999999863 34 4799999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCC
Q 001902 815 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTP 893 (998)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~P 893 (998)
+..+.. ....+++||+.|++||++.. ..|+..+|.|||||++|+++||..|
T Consensus 172 rel~d~----------------------------s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lP 223 (732)
T KOG4250|consen 172 RELDDN----------------------------SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELP 223 (732)
T ss_pred ccCCCC----------------------------CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCC
Confidence 765422 23457899999999999985 7888899999999999999999999
Q ss_pred CCCCCh----HHHHHHHHhCC-------------------CCCCCCCCCcH----HHHHHHHHccccCccCcC
Q 001902 894 FRGKTR----QKTFANILHKD-------------------LKFPSSTPTSL----HAKQLMYRLLHRDPKSRL 939 (998)
Q Consensus 894 f~~~~~----~~~~~~i~~~~-------------------~~~~~~~~~s~----~l~~Ll~~~L~~dP~~Rp 939 (998)
|-.... .+....+..++ ..+|....++. -+...|..+|..+|.+|.
T Consensus 224 F~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~ 296 (732)
T KOG4250|consen 224 FIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG 296 (732)
T ss_pred CCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence 965332 23333333221 11222222333 235688899999999998
No 381
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=8.9e-34 Score=309.45 Aligned_cols=257 Identities=27% Similarity=0.408 Sum_probs=212.8
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC------CCCccceeEEEe
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD------HPFVPALYASFQ 735 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~------h~nIv~l~~~~~ 735 (998)
+...+|.+....|.|-||+|..|.+..-|..||||+|..+.+ -.+.-+.|++||++|+ --++++++..|.
T Consensus 429 ~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~----M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~ 504 (752)
T KOG0670|consen 429 LLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV----MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFK 504 (752)
T ss_pred hhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH----HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhh
Confidence 345889999999999999999999998899999999986532 2344567999999995 348999999999
Q ss_pred eCCeEEEEEecCCCCchhHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecC-CcEEEEeccC
Q 001902 736 TKTHVCLITDYCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDL 813 (998)
Q Consensus 736 ~~~~~~lV~E~~~ggsL~~~l~~~~-~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~-g~vkL~DFG~ 813 (998)
..+++|||||-+ ...|.++|++-+ .-.|....++.|+.||.-||..|-..||+|.||||+|||++++ ..+||||||.
T Consensus 505 hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGS 583 (752)
T KOG0670|consen 505 HKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGS 583 (752)
T ss_pred hcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCcc
Confidence 999999999998 889999998742 2248889999999999999999999999999999999999965 5789999999
Q ss_pred ccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCC
Q 001902 814 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 893 (998)
Q Consensus 814 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~P 893 (998)
|...+.. .-+.+..+..|.|||.+.|.+|++..|+||.||+||||+||+..
T Consensus 584 A~~~~en-----------------------------eitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIl 634 (752)
T KOG0670|consen 584 ASFASEN-----------------------------EITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKIL 634 (752)
T ss_pred ccccccc-----------------------------cccHHHHHHhccCcceeecCcccCCccceeeceeeEEeecccee
Confidence 8543311 11233456789999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHhCCCCCCC----------------------------------------C-----------CCC---
Q 001902 894 FRGKTRQKTFANILHKDLKFPS----------------------------------------S-----------TPT--- 919 (998)
Q Consensus 894 f~~~~~~~~~~~i~~~~~~~~~----------------------------------------~-----------~~~--- 919 (998)
|.|.++..++.-.+...-++|. + ..+
T Consensus 635 FpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~de 714 (752)
T KOG0670|consen 635 FPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDE 714 (752)
T ss_pred cCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCch
Confidence 9999888887766543222220 0 000
Q ss_pred ----cHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 920 ----SLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 920 ----s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
-..+.+||.+||..||++|.| +.++|+||||++
T Consensus 715 q~~~~~~~rdLLdkml~LdP~KRit----~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 715 QPKIVQQLRDLLDKMLILDPEKRIT----VNQALKHPFITE 751 (752)
T ss_pred hHHHHHHHHHHHHHHhccChhhcCC----HHHHhcCCcccC
Confidence 114679999999999999999 999999999985
No 382
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-33 Score=290.84 Aligned_cols=253 Identities=26% Similarity=0.471 Sum_probs=210.6
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC------
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 737 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------ 737 (998)
..+|.-++.+|.|+- .|..|.|.-.++++|+|.+.... .......+..+|..++..+.|+||++++.+|...
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf-~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~ 93 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPF-QNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEF 93 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCcc-ccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHH
Confidence 357888999999998 78889998899999999887653 3333446778899999999999999999999643
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
..+|+||||| ..+|...+.- .+....+..+..|++.|++|||+.||+||||||+||++..++.+||.|||+|...
T Consensus 94 ~e~y~v~e~m-~~nl~~vi~~----elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e 168 (369)
T KOG0665|consen 94 QEVYLVMELM-DANLCQVILM----ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTE 168 (369)
T ss_pred HhHHHHHHhh-hhHHHHHHHH----hcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhccc
Confidence 4689999999 8889888863 2788899999999999999999999999999999999999999999999999542
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 897 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~ 897 (998)
... -..+.++.|..|.|||++.+..+...+||||+||++.||++|+..|.|.
T Consensus 169 ~~~----------------------------~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~ 220 (369)
T KOG0665|consen 169 DTD----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGK 220 (369)
T ss_pred Ccc----------------------------cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCc
Confidence 211 1234568999999999999999999999999999999999999999988
Q ss_pred ChHHHHHHHHhC------------------------------------CCCCCCC----CCCcHHHHHHHHHccccCccC
Q 001902 898 TRQKTFANILHK------------------------------------DLKFPSS----TPTSLHAKQLMYRLLHRDPKS 937 (998)
Q Consensus 898 ~~~~~~~~i~~~------------------------------------~~~~~~~----~~~s~~l~~Ll~~~L~~dP~~ 937 (998)
+..+++.++... +..|+.. ...+..+++|+.+||-.||++
T Consensus 221 d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~ 300 (369)
T KOG0665|consen 221 DHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEK 300 (369)
T ss_pred hHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhh
Confidence 877776666541 0011111 112345789999999999999
Q ss_pred cCCChhcHHHHHcCCCcc
Q 001902 938 RLGSHEGANEIKKHPFFK 955 (998)
Q Consensus 938 Rpt~~~~a~elL~Hp~f~ 955 (998)
|.+ ++++|+||||+
T Consensus 301 Ris----v~daL~HPY~~ 314 (369)
T KOG0665|consen 301 RIS----VDDALRHPYIK 314 (369)
T ss_pred ccc----HHHHhcCCeee
Confidence 999 99999999999
No 383
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-32 Score=304.59 Aligned_cols=254 Identities=22% Similarity=0.310 Sum_probs=218.7
Q ss_pred ccccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC
Q 001902 659 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 738 (998)
Q Consensus 659 ~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 738 (998)
.+.+...+..+..+||.|.||.||.+.+++....||||.++.+.+ .++.|+.|..+|+.++|||+|+++++|..+.
T Consensus 261 kWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM----eveEFLkEAAvMKeikHpNLVqLLGVCT~Ep 336 (1157)
T KOG4278|consen 261 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTHEP 336 (1157)
T ss_pred hhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcch----hHHHHHHHHHHHHhhcCccHHHHhhhhccCC
Confidence 445555667778999999999999999999999999999987544 5788999999999999999999999999999
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccC
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 818 (998)
-+|||+|||..|.|.+||.......++.-.+..++.||..|+.||..+++|||||-..|+|+.++..||+.|||+++.|.
T Consensus 337 PFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMt 416 (1157)
T KOG4278|consen 337 PFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMT 416 (1157)
T ss_pred CeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhc
Confidence 99999999999999999987655667777888899999999999999999999999999999999999999999998875
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 897 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~ 897 (998)
.+.- ..+...--...|.|||.|-...++.++|||+||++|||+.| |-.||.+.
T Consensus 417 gDTY--------------------------TAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGi 470 (1157)
T KOG4278|consen 417 GDTY--------------------------TAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI 470 (1157)
T ss_pred CCce--------------------------ecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCc
Confidence 3321 11112223567999999999999999999999999999996 99999999
Q ss_pred ChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChh
Q 001902 898 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 943 (998)
Q Consensus 898 ~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 943 (998)
+....|.-+ ...+.-.....|++....|+..||++.|.+||+|++
T Consensus 471 dlSqVY~LL-EkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFae 515 (1157)
T KOG4278|consen 471 DLSQVYGLL-EKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAE 515 (1157)
T ss_pred cHHHHHHHH-hccccccCCCCCCHHHHHHHHHHhcCCcccCccHHH
Confidence 887776544 444444455678899999999999999999999876
No 384
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-32 Score=305.77 Aligned_cols=249 Identities=22% Similarity=0.334 Sum_probs=209.7
Q ss_pred CCcccccccCCCCceeEEEEEEccC----CeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGS----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~----~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
....+.+.||.|.||.||++..... .--||||.-+.+. +....+.|..|..+|+.++||||++++|++.+ ...
T Consensus 389 e~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~--t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~ 465 (974)
T KOG4257|consen 389 ELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC--TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPM 465 (974)
T ss_pred hhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC--ChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cce
Confidence 3455667899999999999997432 3358889887654 34457889999999999999999999999876 558
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
|||||+++-|.|..+++.+. ..++...+..++.||+.||+|||++++|||||-..|||+.+..-|||+|||+++.+..+
T Consensus 466 WivmEL~~~GELr~yLq~nk-~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~ 544 (974)
T KOG4257|consen 466 WIVMELAPLGELREYLQQNK-DSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDD 544 (974)
T ss_pred eEEEecccchhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhcccc
Confidence 99999999999999998764 56999999999999999999999999999999999999999999999999999776522
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCCh
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 899 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~ 899 (998)
.- ...+...-...|||||.++-..++.++|||-||+++||++. |..||.+-.+
T Consensus 545 ~y--------------------------YkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkN 598 (974)
T KOG4257|consen 545 AY--------------------------YKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKN 598 (974)
T ss_pred ch--------------------------hhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccc
Confidence 11 11122223557999999999999999999999999999985 9999999888
Q ss_pred HHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhc
Q 001902 900 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 944 (998)
Q Consensus 900 ~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 944 (998)
.+.+-.+.++. .+|....+++.+..|+.+||.++|.+||++.++
T Consensus 599 sDVI~~iEnGe-RlP~P~nCPp~LYslmskcWayeP~kRPrftei 642 (974)
T KOG4257|consen 599 SDVIGHIENGE-RLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEI 642 (974)
T ss_pred cceEEEecCCC-CCCCCCCCChHHHHHHHHHhccCcccCCcHHHH
Confidence 77777666654 445566788999999999999999999998763
No 385
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.98 E-value=7e-33 Score=315.71 Aligned_cols=267 Identities=23% Similarity=0.328 Sum_probs=228.2
Q ss_pred cccccccCCcccccccCCCCceeEEEEEEccCC---eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEE
Q 001902 658 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSG---QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASF 734 (998)
Q Consensus 658 ~~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~---~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~ 734 (998)
-...|.....++.+.||.|.||.||.++.+..| ..||||.++... .......|+.|+.||-+++||||++|-++.
T Consensus 622 FakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy--tekqrrdFL~EAsIMGQFdHPNIIrLEGVV 699 (996)
T KOG0196|consen 622 FAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY--TEKQRRDFLSEASIMGQFDHPNIIRLEGVV 699 (996)
T ss_pred hhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc--cHHHHhhhhhhhhhcccCCCCcEEEEEEEE
Confidence 344566777889999999999999999998776 469999998653 445677899999999999999999999999
Q ss_pred eeCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCc
Q 001902 735 QTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 814 (998)
Q Consensus 735 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a 814 (998)
....-+.||+|||++|+|..+|+.+. +.++..++.-+++.|+.|++||-++|.|||||-..|||++++-.+|++|||++
T Consensus 700 Tks~PvMIiTEyMENGsLDsFLR~~D-GqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLS 778 (996)
T KOG0196|consen 700 TKSKPVMIITEYMENGSLDSFLRQND-GQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLS 778 (996)
T ss_pred ecCceeEEEhhhhhCCcHHHHHhhcC-CceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccce
Confidence 99999999999999999999998775 45999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHH-cCCCC
Q 001902 815 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTP 893 (998)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLl-tG~~P 893 (998)
+.+..++...+. ...---...|.|||.+...+++.+|||||+|++|||.+ +|..|
T Consensus 779 Rvledd~~~~yt------------------------t~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERP 834 (996)
T KOG0196|consen 779 RVLEDDPEAAYT------------------------TLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 834 (996)
T ss_pred eecccCCCcccc------------------------ccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCc
Confidence 876544321111 01111246799999999999999999999999999988 59999
Q ss_pred CCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhc---HHHHHcCC
Q 001902 894 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG---ANEIKKHP 952 (998)
Q Consensus 894 f~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~---a~elL~Hp 952 (998)
|...++++.++.|.++ +.+|....++..+.+|+..||++|-..||.|.++ ++.++..|
T Consensus 835 YWdmSNQdVIkaIe~g-yRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP 895 (996)
T KOG0196|consen 835 YWDMSNQDVIKAIEQG-YRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNP 895 (996)
T ss_pred ccccchHHHHHHHHhc-cCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCc
Confidence 9999999999887664 6677777889999999999999999999998765 34455554
No 386
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.98 E-value=3.8e-32 Score=300.61 Aligned_cols=255 Identities=22% Similarity=0.319 Sum_probs=209.5
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEE
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 741 (998)
+.-+...++++||+|.||.|.+|.- ..+..||+|.++... .......+..|+++|.+|+||||+.++++|..++.+|
T Consensus 535 fPRs~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a--~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePic 611 (807)
T KOG1094|consen 535 FPRSRLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRPDA--TKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLC 611 (807)
T ss_pred cchhheehhhhhcCcccceeEEEEe-cCceEEEEeecCccc--chhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchH
Confidence 3345678889999999999999997 447999999998764 3445688999999999999999999999999999999
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 821 (998)
+|+|||++|+|.+++..+....+.......|+.||+.||+||.+.++|||||.+.|+|++.++++||+|||+++.+-..+
T Consensus 612 mI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~ 691 (807)
T KOG1094|consen 612 MITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGD 691 (807)
T ss_pred HHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCC
Confidence 99999999999999988744434556677799999999999999999999999999999999999999999996432110
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHH--cCCCCCCCCCh
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML--YGYTPFRGKTR 899 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLl--tG~~Pf~~~~~ 899 (998)
- .+.....+-...|||||.+..++++.++|+|+||+++||++ +...||...+.
T Consensus 692 y-------------------------y~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~ 746 (807)
T KOG1094|consen 692 Y-------------------------YRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTD 746 (807)
T ss_pred c-------------------------eeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhH
Confidence 0 01223345567899999999999999999999999999987 58889988877
Q ss_pred HHHHHHHHhC------CCCCCCCCCCcHHHHHHHHHccccCccCcCCChhc
Q 001902 900 QKTFANILHK------DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 944 (998)
Q Consensus 900 ~~~~~~i~~~------~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 944 (998)
....+..-.- ..-++...-++..+.++|..||+.+-.+||++.++
T Consensus 747 e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~l 797 (807)
T KOG1094|consen 747 EQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQL 797 (807)
T ss_pred HHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHH
Confidence 6666554321 11123344577889999999999999999995543
No 387
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.98 E-value=4.1e-31 Score=282.99 Aligned_cols=242 Identities=43% Similarity=0.719 Sum_probs=204.4
Q ss_pred CceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEecCCCCchhHHH
Q 001902 677 DTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLLL 756 (998)
Q Consensus 677 ~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l 756 (998)
+||.||++.+..+++.+++|++........ ...+.+|+.++++++|+||+++++++......+++|||+++++|.+++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~ 78 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLL 78 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH--HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHH
Confidence 589999999988899999999876533221 578889999999999999999999999999999999999999999998
Q ss_pred hhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcchhhhhccc
Q 001902 757 DRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHK 836 (998)
Q Consensus 757 ~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~ 836 (998)
..... ++...+..++.+++.+|.|||+.+++|+||+|+||+++.++.++|+|||.+.......
T Consensus 79 ~~~~~--~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--------------- 141 (244)
T smart00220 79 KKRGR--LSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--------------- 141 (244)
T ss_pred HhccC--CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc---------------
Confidence 76532 8999999999999999999999999999999999999999999999999985543111
Q ss_pred CCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCC-CChHHHHHHHHhCCCCCCC
Q 001902 837 GQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG-KTRQKTFANILHKDLKFPS 915 (998)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~-~~~~~~~~~i~~~~~~~~~ 915 (998)
......++..|++||.+.+..++.++||||||+++|+|++|..||.. .+.......+.........
T Consensus 142 -------------~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 208 (244)
T smart00220 142 -------------LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPP 208 (244)
T ss_pred -------------ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCcc
Confidence 12234688899999999988889999999999999999999999988 4444444444444333322
Q ss_pred CCC-CcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 916 STP-TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 916 ~~~-~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
... .+..+.+++.+||..+|++||+ +.++++||||
T Consensus 209 ~~~~~~~~~~~~i~~~l~~~p~~Rp~----~~~~~~~~~~ 244 (244)
T smart00220 209 PEWKISPEAKDLIRKLLVKDPEKRLT----AEEALQHPFF 244 (244)
T ss_pred ccccCCHHHHHHHHHHccCCchhccC----HHHHhhCCCC
Confidence 222 6788999999999999999999 9999999997
No 388
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.98 E-value=2.9e-31 Score=310.20 Aligned_cols=266 Identities=18% Similarity=0.204 Sum_probs=191.7
Q ss_pred ccccCCcccccccCCCCceeEEEEEEc----------------cCCeEEEEEEeecccccChh-----------HHHHHH
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELC----------------GSGQYFAMKAMDKGVMLNRN-----------KVHRAC 713 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~----------------~~~~~valK~i~~~~~~~~~-----------~~~~~~ 713 (998)
.+..++|++.++||+|+||.||++.+. ..++.||||.+......... ..+...
T Consensus 141 r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~ 220 (507)
T PLN03224 141 RWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGM 220 (507)
T ss_pred CccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhH
Confidence 355789999999999999999999752 34568999998643211000 112233
Q ss_pred HHHHHHHhCCCCCc-----cceeEEEee--------CCeEEEEEecCCCCchhHHHhhCCC-------------------
Q 001902 714 AEREILDMLDHPFV-----PALYASFQT--------KTHVCLITDYCPGGELFLLLDRQPT------------------- 761 (998)
Q Consensus 714 ~E~~il~~l~h~nI-----v~l~~~~~~--------~~~~~lV~E~~~ggsL~~~l~~~~~------------------- 761 (998)
.|+.++.+++|.++ +.++++|.. .+..||||||+++++|.+++.....
T Consensus 221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~ 300 (507)
T PLN03224 221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN 300 (507)
T ss_pred HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence 46677777766544 666666642 3568999999999999999864211
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCC
Q 001902 762 ---KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQ 838 (998)
Q Consensus 762 ---~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~ 838 (998)
..++...++.++.|++.+|.|||+++|+||||||+|||++.++.+||+|||++..+.....
T Consensus 301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~---------------- 364 (507)
T PLN03224 301 MPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN---------------- 364 (507)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCc----------------
Confidence 1235677889999999999999999999999999999999999999999999854321100
Q ss_pred CCcccccccccccccccCCCCcccchhhcCCCC----------------------CChhHHHHHHHHHHHHHcCCC-CCC
Q 001902 839 QNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH----------------------TSAVDWWALGILLYEMLYGYT-PFR 895 (998)
Q Consensus 839 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~----------------------~~~sDIwSlG~il~eLltG~~-Pf~ 895 (998)
.......+|+.|+|||.+..... ..+.||||+||++|+|++|.. ||.
T Consensus 365 ----------~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~ 434 (507)
T PLN03224 365 ----------FNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVA 434 (507)
T ss_pred ----------cCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCcc
Confidence 00112235889999999854321 124799999999999999886 775
Q ss_pred CCChH-----------HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCc---cCcCCChhcHHHHHcCCCccC
Q 001902 896 GKTRQ-----------KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDP---KSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 896 ~~~~~-----------~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP---~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
+.... .....+......++.....+..+++|+.+||..+| .+|+| +.++|+||||..
T Consensus 435 ~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlS----a~eaL~Hp~f~~ 505 (507)
T PLN03224 435 NIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLS----VGQALSHRFFLP 505 (507)
T ss_pred chhhhhhHHhhccchHHHHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCC----HHHHhCCCCcCC
Confidence 42211 11112223344555556678899999999999876 68999 999999999964
No 389
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.98 E-value=3.3e-32 Score=266.82 Aligned_cols=223 Identities=26% Similarity=0.394 Sum_probs=185.4
Q ss_pred cccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCC
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT 738 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~ 738 (998)
..+..++...+..||+|++|.|-+.++..+|...|+|.+.... .....+++.+|+.+..+. ++|++|.+|+.+....
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv--n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~reg 118 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV--NSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREG 118 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc--ChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccc
Confidence 3455567777889999999999999999999999999998542 344556778888876665 8999999999999999
Q ss_pred eEEEEEecCCCCchhHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCcEEEecCCcEEEEeccCcc
Q 001902 739 HVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSC 815 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~~LH~~-~IiHrDLkP~NILi~~~g~vkL~DFG~a~ 815 (998)
.+||.||.| ..||..+.++ ..++.+++..+-+|+..++.||.|||++ .+||||+||+||||+.+|++|+||||++-
T Consensus 119 dvwIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG 197 (282)
T KOG0984|consen 119 DVWICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISG 197 (282)
T ss_pred cEEEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccce
Confidence 999999999 7788766543 3457799999999999999999999987 99999999999999999999999999985
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC----CCCCChhHHHHHHHHHHHHHcCC
Q 001902 816 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG----AGHTSAVDWWALGILLYEMLYGY 891 (998)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~----~~~~~~sDIwSlG~il~eLltG~ 891 (998)
.+.. +...+...|-..|||||.+.. ..|+.++||||||+++.||.+++
T Consensus 198 ~L~d----------------------------SiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr 249 (282)
T KOG0984|consen 198 YLVD----------------------------SIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILR 249 (282)
T ss_pred eehh----------------------------hhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcc
Confidence 4321 111223468889999999843 47888999999999999999999
Q ss_pred CCCCC-CChHHHHHHHHhCCCCC
Q 001902 892 TPFRG-KTRQKTFANILHKDLKF 913 (998)
Q Consensus 892 ~Pf~~-~~~~~~~~~i~~~~~~~ 913 (998)
.||.. .++.++++.++....+.
T Consensus 250 ~PY~~w~tpF~qLkqvVeep~P~ 272 (282)
T KOG0984|consen 250 FPYESWGTPFQQLKQVVEEPSPQ 272 (282)
T ss_pred ccccccCCHHHHHHHHhcCCCCC
Confidence 99975 56778888888765443
No 390
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=3.1e-33 Score=283.46 Aligned_cols=262 Identities=27% Similarity=0.432 Sum_probs=213.5
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC-----e
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT-----H 739 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~-----~ 739 (998)
.+.+.-+.||.|+||.||.+.|..+|+.||+|.+.. ........+++.+|+.+|..++|.||+..++..+..+ .
T Consensus 53 ~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pn-vfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqE 131 (449)
T KOG0664|consen 53 QDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPN-VFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQE 131 (449)
T ss_pred ccCCCCCcccccceeEEEeccCCCCccchhHhhcch-HHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHH
Confidence 456677999999999999999999999999998864 3445556788999999999999999999998876543 4
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCC
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 819 (998)
+|+|+|+| ..+|..++-. ...++.+.++-+++||++||+|||+.||.||||||.|+|+++|..+||||||+++.-..
T Consensus 132 iYV~TELm-QSDLHKIIVS--PQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 132 LYVLTELM-QSDLHKIIVS--PQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHHHHH-Hhhhhheecc--CCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccch
Confidence 68899998 6778777754 35699999999999999999999999999999999999999999999999999965331
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCCCCCCC
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKT 898 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf~~~~ 898 (998)
+. ....+..+.|.+|.|||.+++. .|+.++||||.|||+.||+..+..|...+
T Consensus 209 d~--------------------------~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~ 262 (449)
T KOG0664|consen 209 RD--------------------------RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAG 262 (449)
T ss_pred hh--------------------------hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccC
Confidence 11 1122334678999999999986 57889999999999999999999999888
Q ss_pred hHHHHHHHHh-----------------------CCCCCCCC---------CCCcHHHHHHHHHccccCccCcCCChhcHH
Q 001902 899 RQKTFANILH-----------------------KDLKFPSS---------TPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 946 (998)
Q Consensus 899 ~~~~~~~i~~-----------------------~~~~~~~~---------~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~ 946 (998)
+.+++..|.. +..+.|+. .....+...++.+||..||++|.+ ..
T Consensus 263 PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris----~~ 338 (449)
T KOG0664|consen 263 PIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRIS----VE 338 (449)
T ss_pred hHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCccccc----Hh
Confidence 7776665543 12222221 112236678999999999999999 99
Q ss_pred HHHcCCCccCCChh
Q 001902 947 EIKKHPFFKGVNWA 960 (998)
Q Consensus 947 elL~Hp~f~~~~~~ 960 (998)
+.+.|+|.....+.
T Consensus 339 ~A~~~~~~~e~R~r 352 (449)
T KOG0664|consen 339 EALQHRYLEEGRLR 352 (449)
T ss_pred hhccccccccccee
Confidence 99999999886654
No 391
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.97 E-value=3.5e-32 Score=305.63 Aligned_cols=285 Identities=26% Similarity=0.399 Sum_probs=237.3
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.++|+++.++|+|.+|.||+++++.+++..|+|+++... .....-+++|+-+++.++||||+.+++.|...+.+||+
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep---~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwic 90 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEP---GDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWIC 90 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccC---CccccccccceeeeecCCCcChHHHHhhhhhhcCcEEE
Confidence 468999999999999999999999999999999998653 34456677899999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
||||.||+|.+..+. .+++++.++..+++..++||+|||+.|-+|||||-.|||++..|.+||.|||.+..+.
T Consensus 91 MEycgggslQdiy~~--TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqit----- 163 (829)
T KOG0576|consen 91 MEYCGGGSLQDIYHV--TGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQIT----- 163 (829)
T ss_pred EEecCCCcccceeee--cccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhh-----
Confidence 999999999998765 3679999999999999999999999999999999999999999999999999985543
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhh---cCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII---AGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 900 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l---~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~ 900 (998)
.....+.++.||++|||||+. ....|...+|||++|++..||.--++|.....+.
T Consensus 164 ----------------------ati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpm 221 (829)
T KOG0576|consen 164 ----------------------ATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPM 221 (829)
T ss_pred ----------------------hhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchH
Confidence 112234678999999999986 4577899999999999999999999998887777
Q ss_pred HHHHHHHhCCCCCC---CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCC-----hhhhhcCCCCCCCC
Q 001902 901 KTFANILHKDLKFP---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN-----WALVRCMNPPELDA 972 (998)
Q Consensus 901 ~~~~~i~~~~~~~~---~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~-----~~~~~~~~~~~~~~ 972 (998)
..+.-..+..++.| +....+..+-+|++.+|.++|.+||+ ++.+|.|||....- -.+|-.++-|..++
T Consensus 222 r~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRpt----aeklL~h~fvs~~l~~rl~~eLLdK~n~P~~~v 297 (829)
T KOG0576|consen 222 RALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPT----AEKLLQHPFVSQTLSRRLAIELLDKVNNPNPVV 297 (829)
T ss_pred HHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCC----hhhheeceeeccchhhHHHHHHHHHccCCCCcc
Confidence 77766666655444 34556788999999999999999999 99999999998741 12344444444445
Q ss_pred CCCCCccccccc
Q 001902 973 PLFATDTEKEYK 984 (998)
Q Consensus 973 p~~~~~~~~~~~ 984 (998)
..+--+...+|-
T Consensus 298 ~~~~d~~~E~~~ 309 (829)
T KOG0576|consen 298 RYLEDYDGEDYL 309 (829)
T ss_pred cccccCCccccc
Confidence 554444444443
No 392
>PRK13560 hypothetical protein; Provisional
Probab=99.97 E-value=5.1e-30 Score=324.89 Aligned_cols=406 Identities=11% Similarity=0.065 Sum_probs=301.3
Q ss_pred cccccccccccccccccccchHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCC
Q 001902 167 SVRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTD 246 (998)
Q Consensus 167 ~~~~~~dit~~~~~e~~l~~~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~ 246 (998)
......|||++++++++|+++++.|+.++++++++++++|. +|+|+++|+++++++||+.+|++|+++..+.++...
T Consensus 182 ~~g~~~DIT~rk~ae~~l~~~~~~l~~l~e~~~~~i~~~d~---~g~i~~~N~~~~~~~G~~~~e~~g~~~~~~~~~~~~ 258 (807)
T PRK13560 182 VDGFAEDITERKRAEERIDEALHFLQQLLDNIADPAFWKDE---DAKVFGCNDAACLACGFRREEIIGMSIHDFAPAQPA 258 (807)
T ss_pred EEEEEEccchHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC---CCCEEEEhHHHHHHhCCCHHHHcCCcchhcCCcchh
Confidence 34456999999999999999999999999999999999998 788999999999999999999999999888776654
Q ss_pred hHHHHHHHHHHHcCCcEEEEEEEEecCCCEEEEEeee--eEEeCCCCCEEEEEEEEecchhhhHHHHHhhcCCCCCchhh
Q 001902 247 PEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTI--APIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESL 324 (998)
Q Consensus 247 ~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~--spi~d~~G~v~~~v~i~~DITerk~~E~~l~~~~~~L~~~l 324 (998)
..........+..++....+.+++++||+.+|+++.+ .|+.+.+|.+.+++++++|||++|++|++++.+.+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~~~~~~~~g~~~g~~~~~~DITerk~~e~~L~~se~------ 332 (807)
T PRK13560 259 DDYQEADAAKFDADGSQIIEAEFQNKDGRTRPVDVIFNHAEFDDKENHCAGLVGAITDISGRRAAERELLEKED------ 332 (807)
T ss_pred HHHHHHHHHHhccCCceEEEEEEEcCCCCEEEEEEEecceEEEcCCCCEEEEEEEEEechHHHHHHHHHHHHHH------
Confidence 4444445556667777788889999999999776654 55678999999999999999999999998765311
Q ss_pred hhHHHHHHHHhHhhHHHHHHHcc-CCCCccccCCCCcc-cccCCCCchhhhcccccCCCCCCCCCCCCCC----------
Q 001902 325 IRYDARQKEMATSSVTELVQAMK-KPRSLSESTNRPPI-IRKSEGGVEEERAGALGRRKSENVPPPRRNS---------- 392 (998)
Q Consensus 325 ~~~d~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~e~~g~~~~~~~~~~~~~~---------- 392 (998)
.+..+..... .....+..+.+++. +..+...+||+.++++|+....+.|.....-
T Consensus 333 -------------~l~~l~~~~~~~i~~~d~~g~i~~~nn~~~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~ 399 (807)
T PRK13560 333 -------------MLRAIIEAAPIAAIGLDADGNICFVNNNAAERMLGWSAAEVMGKPLPGMDPELNEEFWCGDFQEWYP 399 (807)
T ss_pred -------------HHHHHHHhCcccEEEEcCCCCEEEecCHHHHHHhCCCHHHHcCCCccccChhhhhhhhhchhhhcCC
Confidence 1122222222 22334444555554 4456668999999999998777665321110
Q ss_pred ----CCC------CcccccccccccchhhccccCCccccccccccccCCCCCCCccccccccCCCCCCCCCCCCCchhhH
Q 001902 393 ----YGG------GCRTSMQRISEVPEKKKQKSGRRSFMGLIGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDK 462 (998)
Q Consensus 393 ----~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~er~ 462 (998)
... .....+......+.....++|...|+.....+..+.+|.......+ ..||++|+
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~~~~~~~p~~d~~g~~~~~~~~-------------~~DITerk 466 (807)
T PRK13560 400 DGRPMAFDACPMAKTIKGGKIFDGQEVLIEREDDGPADCSAYAEPLHDADGNIIGAIAL-------------LVDITERK 466 (807)
T ss_pred cCCcchhhhhhHHHHHhcCCcccCceEEEEcCCCCeEEEEEEEeeeECCCCCEEEEEEE-------------eehhhhHH
Confidence 000 0011112223334455677888999999888888877766544444 78999999
Q ss_pred HHHHhhhccccHHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCC--CccccCCCCCHHHHHHHHHHH
Q 001902 463 VRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRN--CRFLQGPETDPATVRKIRAAI 540 (998)
Q Consensus 463 ~~e~e~r~~~~l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~--~~~l~~p~~~~~~~~~i~~~l 540 (998)
..|++++. .+.++++++++++.++..+ +..+.+|.....++||+++|+++.. +..+.+|++.......+...+
T Consensus 467 ~~E~~L~~---~~~~~e~~~~~i~~~~~~~--~~~~~~~~~~~~~~G~~~~e~~~~~~~~~~~~~p~d~~~~~~~~~~~~ 541 (807)
T PRK13560 467 QVEEQLLL---ANLIVENSPLVLFRWKAEE--GWPVELVSKNITQFGYEPDEFISGKRMFAAIIHPADLEQVAAEVAEFA 541 (807)
T ss_pred HHHHHHHH---HHHHHhcCCceEEEEecCC--CceEEEecchhhhcCCCHHHhhcccchHhhhcChhhHHHHHHHHHHHH
Confidence 99999987 6789999999999887652 2355666667788999999998633 456778888777777777777
Q ss_pred hcC-CcEEEEEEEEecCCcEEEEEEEEeeeccCC----EEEEEEecCCccccccccCcchhhhhHHHHHHHHhhhhhhhh
Q 001902 541 DNQ-TDVTVQLINYTKSGKKFWNLFHLQPMRDQK----YFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNEA 615 (998)
Q Consensus 541 ~~g-~~~~~e~~~~rkdG~~~wv~~~~spi~d~~----~~vgi~rDITerk~~~~~~~~e~~~~~~~~~~k~~~~~v~e~ 615 (998)
..+ ..+..+++..++||..+|+..+..|++|.+ +++|+++|||+||+. |+.+++..+....++.++.|.
T Consensus 542 ~~g~~~~~~e~r~~~~dG~~~w~~~~~~~~~d~~G~~~~~~g~~~DITerK~a------E~~L~~a~~~~~~~l~~isHe 615 (807)
T PRK13560 542 AQGVDRFEQEYRILGKGGAVCWIDDQSAAERDEEGQISHFEGIVIDISERKHA------EEKIKAALTEKEVLLKEIHHR 615 (807)
T ss_pred hcCCccceeEEEEEcCCCCEEEEEecceeeeCCCCCEEEEEEEEechHHHHHH------HHHHHHHHHHHHHHHHHhHHH
Confidence 665 447889999999999999999999999886 899999999999973 333333333344445555544
Q ss_pred hcc
Q 001902 616 VKE 618 (998)
Q Consensus 616 ~~e 618 (998)
++.
T Consensus 616 lrn 618 (807)
T PRK13560 616 VKN 618 (807)
T ss_pred HhC
Confidence 443
No 393
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.97 E-value=5.3e-31 Score=284.90 Aligned_cols=291 Identities=23% Similarity=0.334 Sum_probs=210.7
Q ss_pred hhhccccccccCCcccccccCCCCceeEEEEEEcc---CCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccc
Q 001902 654 KILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPA 729 (998)
Q Consensus 654 ~~~~~~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~---~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~ 729 (998)
++.++...+ ...|.++++||+|.|++||++.+.. ..+.||+|.+.... ...++.+|+++|..+ .+.||+.
T Consensus 26 ~l~q~~p~~-~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-----~p~ri~~El~~L~~~gG~~ni~~ 99 (418)
T KOG1167|consen 26 QLRQDIPFI-SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-----SPSRILNELEMLYRLGGSDNIIK 99 (418)
T ss_pred HHHhhhhhh-hhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-----CchHHHHHHHHHHHhccchhhhc
Confidence 333433333 3579999999999999999999977 78899999886432 345788999999999 6999999
Q ss_pred eeEEEeeCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec-CCcEEE
Q 001902 730 LYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSL 808 (998)
Q Consensus 730 l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~-~g~vkL 808 (998)
+.+++..++.+++||||++..+..++... ++...++.+++.++.||.++|++|||||||||+|||++. .+.-.|
T Consensus 100 ~~~~~rnnd~v~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~L 174 (418)
T KOG1167|consen 100 LNGCFRNNDQVAIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVL 174 (418)
T ss_pred chhhhccCCeeEEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceE
Confidence 99999999999999999999999998865 788999999999999999999999999999999999984 577899
Q ss_pred EeccCccccCCCC-----------CCCC-CcchhhhhcccCCCCc-ccc----cccccccccccCCCCcccchhhcC-CC
Q 001902 809 TDFDLSCLTSCKP-----------QLLL-PTTNEKKRRHKGQQNP-VFM----AEPMRASNSFVGTEEYIAPEIIAG-AG 870 (998)
Q Consensus 809 ~DFG~a~~~~~~~-----------~~~~-~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~gt~~y~aPE~l~~-~~ 870 (998)
+|||+|....... .... ...........+...+ ... ...........||++|.|||++.. ..
T Consensus 175 vDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~ 254 (418)
T KOG1167|consen 175 VDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPR 254 (418)
T ss_pred EechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccC
Confidence 9999996211000 0000 0000000000000000 000 111123345689999999999966 56
Q ss_pred CCChhHHHHHHHHHHHHHcCCCCCCCCCh-HHHHHHHHh--------------CC---------------------C---
Q 001902 871 HTSAVDWWALGILLYEMLYGYTPFRGKTR-QKTFANILH--------------KD---------------------L--- 911 (998)
Q Consensus 871 ~~~~sDIwSlG~il~eLltG~~Pf~~~~~-~~~~~~i~~--------------~~---------------------~--- 911 (998)
.++++||||.|+|+..++++..||..... ...+..|.. +. +
T Consensus 255 QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~ 334 (418)
T KOG1167|consen 255 QTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIE 334 (418)
T ss_pred cCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChh
Confidence 78899999999999999999999853211 111111100 01 0
Q ss_pred -CCC----------CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCCh
Q 001902 912 -KFP----------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 959 (998)
Q Consensus 912 -~~~----------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 959 (998)
..+ .....+..+.+|+.+||..||.+|+| ++++|+||||...+-
T Consensus 335 ~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRit----AEeALkHpFF~~~~~ 389 (418)
T KOG1167|consen 335 SIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRIT----AEDALKHPFFDEADR 389 (418)
T ss_pred hcccccccceeeccccccccHHHHHHHHHHccCChhhccc----HHHHhcCcCCcchhh
Confidence 000 01123447889999999999999999 999999999996543
No 394
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=2e-31 Score=307.34 Aligned_cols=251 Identities=28% Similarity=0.399 Sum_probs=200.1
Q ss_pred cccccccCCCCcee-EEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCeEEEEE
Q 001902 667 FRPIKPLGSGDTGS-VHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 667 y~~~~~LG~G~~g~-Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
|.-.+.+|.|+.|+ ||++.. .|+.||||.+-.+ ...-..+|+.+|+.- +||||+++|+.-.+....||..
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~e------~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIal 582 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY--EGREVAVKRLLEE------FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIAL 582 (903)
T ss_pred eccHHHcccCCCCcEEEEEee--CCceehHHHHhhH------hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEe
Confidence 45557789999986 699987 6889999987644 345677899999988 6999999999999999999999
Q ss_pred ecCCCCchhHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec---C--CcEEEEeccCcccc
Q 001902 745 DYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---N--GHVSLTDFDLSCLT 817 (998)
Q Consensus 745 E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~---~--g~vkL~DFG~a~~~ 817 (998)
|.| ..+|.+++... ..........+.++.|+++||++||+.+||||||||.||||+. + ..++|+|||+++..
T Consensus 583 ELC-~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 583 ELC-ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred hHh-hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 999 88999999873 1111222456788999999999999999999999999999986 3 46899999999876
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 896 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~ 896 (998)
....... .......||.+|+|||++.....+.++|||||||++|+.++ |..||..
T Consensus 662 ~~~~sS~------------------------~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd 717 (903)
T KOG1027|consen 662 AGGKSSF------------------------SRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGD 717 (903)
T ss_pred CCCcchh------------------------hcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCc
Confidence 5333221 22456679999999999999888889999999999999998 5899976
Q ss_pred CChHHHHHHHHhCCCCCCCCCCC-cHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 897 KTRQKTFANILHKDLKFPSSTPT-SLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 897 ~~~~~~~~~i~~~~~~~~~~~~~-s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
.. +.-.+|+.++..+-..... ..++.+||.+||+.+|..||+ |.++|.||||=.
T Consensus 718 ~~--~R~~NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPs----a~~VL~HPlFW~ 772 (903)
T KOG1027|consen 718 SL--ERQANILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPS----ATDVLNHPLFWD 772 (903)
T ss_pred hH--HhhhhhhcCccceeeeccCchHHHHHHHHHhcCCCcccCCC----HHHHhCCCccCC
Confidence 43 3334566655433222111 128899999999999999999 999999999954
No 395
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1.2e-29 Score=289.73 Aligned_cols=253 Identities=22% Similarity=0.281 Sum_probs=211.8
Q ss_pred CcccccccCCCCceeEEEEEEccCCe----EEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEE
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~----~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 741 (998)
..+..++||+|+||+||++.+...|+ +||+|++... ........+..|+-+|.+++|||++++++++.... +.
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~--t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~q 773 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEF--TSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQ 773 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeecc--CCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HH
Confidence 35667889999999999999865544 6788887653 23445678899999999999999999999998766 88
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 821 (998)
||++|+++|+|.++++.++ ..+.......|+.||++||.|||.+++|||||-..|||+.+-..+||.|||+++....+.
T Consensus 774 lvtq~mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~ 852 (1177)
T KOG1025|consen 774 LVTQLMPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDE 852 (1177)
T ss_pred HHHHhcccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCccc
Confidence 9999999999999998754 568889999999999999999999999999999999999999999999999997765332
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCChH
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 900 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~ 900 (998)
..+ ......-.+.|||-|.+....|+.++||||||+++|||+| |..||.+....
T Consensus 853 ~ey-------------------------~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~ 907 (1177)
T KOG1025|consen 853 KEY-------------------------SAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE 907 (1177)
T ss_pred ccc-------------------------cccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH
Confidence 211 1112234567999999999999999999999999999997 99999998776
Q ss_pred HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHH
Q 001902 901 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 948 (998)
Q Consensus 901 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~el 948 (998)
++-+.+..++ .++....++.++..++.+||..|+..||++++.+.+.
T Consensus 908 eI~dlle~ge-RLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~f 954 (1177)
T KOG1025|consen 908 EIPDLLEKGE-RLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEF 954 (1177)
T ss_pred HhhHHHhccc-cCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHH
Confidence 6655554444 4777778899999999999999999999988765554
No 396
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=6.1e-30 Score=283.11 Aligned_cols=202 Identities=32% Similarity=0.502 Sum_probs=177.7
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHH-----HHHHHHHHHHHhCC---CCCccceeEEEe
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKV-----HRACAEREILDMLD---HPFVPALYASFQ 735 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~-----~~~~~E~~il~~l~---h~nIv~l~~~~~ 735 (998)
..+|..++.||+|+||.|++|.++++...|++|.+.++.+.-...+ ..+-.||.||..++ |+||++++++|+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 4579999999999999999999999999999999988655433222 23446999999997 999999999999
Q ss_pred eCCeEEEEEecC-CCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCc
Q 001902 736 TKTHVCLITDYC-PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 814 (998)
Q Consensus 736 ~~~~~~lV~E~~-~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a 814 (998)
+++++||+||-. +|.+|++++..+ ..+++..++.|++|++.|+++||+.||||||||-+|+.++++|.+||+|||.|
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~k--p~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsa 717 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEFK--PRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSA 717 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhcc--CccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccch
Confidence 999999999987 466899999886 44999999999999999999999999999999999999999999999999988
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCC-CChhHHHHHHHHHHHHHcCCCC
Q 001902 815 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTP 893 (998)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-~~~sDIwSlG~il~eLltG~~P 893 (998)
.... +.+...++||..|.|||++.|.+| ...-|||+||++||-+++...|
T Consensus 718 a~~k-----------------------------sgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenp 768 (772)
T KOG1152|consen 718 AYTK-----------------------------SGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENP 768 (772)
T ss_pred hhhc-----------------------------CCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCC
Confidence 4422 234567899999999999999877 5678999999999999999999
Q ss_pred CCC
Q 001902 894 FRG 896 (998)
Q Consensus 894 f~~ 896 (998)
|..
T Consensus 769 yyn 771 (772)
T KOG1152|consen 769 YYN 771 (772)
T ss_pred CcC
Confidence 975
No 397
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.96 E-value=4.1e-29 Score=322.43 Aligned_cols=238 Identities=20% Similarity=0.306 Sum_probs=184.2
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
.|...+.||+|+||.||+|.+..++..||+|.+..... ....|+.++++++||||+++++++...+..|+|||
T Consensus 691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~E 763 (968)
T PLN00113 691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-------IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHE 763 (968)
T ss_pred hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-------ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEe
Confidence 46677889999999999999988999999998864321 11245888999999999999999999999999999
Q ss_pred cCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCC
Q 001902 746 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH---CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 822 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH---~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 822 (998)
|+++|+|.++++. +++..+..++.||+.||+||| +.+|+||||||+||+++.++..++. ||.+....
T Consensus 764 y~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~---- 833 (968)
T PLN00113 764 YIEGKNLSEVLRN-----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLC---- 833 (968)
T ss_pred CCCCCcHHHHHhc-----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccc----
Confidence 9999999999953 788999999999999999999 6699999999999999988887775 66542211
Q ss_pred CCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChH-H
Q 001902 823 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ-K 901 (998)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~-~ 901 (998)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .
T Consensus 834 ---------------------------~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~ 886 (968)
T PLN00113 834 ---------------------------TDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHG 886 (968)
T ss_pred ---------------------------cCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCC
Confidence 011236889999999999999999999999999999999999998542210 0
Q ss_pred HHHHHHh---CC--------CCCCCC----CCCcHHHHHHHHHccccCccCcCCChhcHHH
Q 001902 902 TFANILH---KD--------LKFPSS----TPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 947 (998)
Q Consensus 902 ~~~~i~~---~~--------~~~~~~----~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~e 947 (998)
......+ .. ...... .....++.+++.+||+.||++||++.+++..
T Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 887 SIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred cHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence 0111110 00 000000 1112356789999999999999995554433
No 398
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=2.1e-28 Score=296.05 Aligned_cols=263 Identities=25% Similarity=0.365 Sum_probs=212.8
Q ss_pred cccccCCcccccccCCCCceeEEEEEEcc-------CCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcccee
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALY 731 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~-------~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~ 731 (998)
+.+......+.+.||+|.||.|+++.... ....||+|.++.... ......+..|+++|+.+ .|+||+.++
T Consensus 291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~--~~~~~~~~~El~~m~~~g~H~niv~ll 368 (609)
T KOG0200|consen 291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENAS--SSEKKDLMSELNVLKELGKHPNIVNLL 368 (609)
T ss_pred eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccC--cHHHHHHHHHHHHHHHhcCCcchhhhe
Confidence 33444555666799999999999998531 146799999886533 36778899999999999 699999999
Q ss_pred EEEeeCCeEEEEEecCCCCchhHHHhhCC-------C-------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCc
Q 001902 732 ASFQTKTHVCLITDYCPGGELFLLLDRQP-------T-------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 797 (998)
Q Consensus 732 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~-------~-------~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~N 797 (998)
+++...+.+++|+||+..|+|..++.... . ..++...+..++.||+.|++||+++++|||||-..|
T Consensus 369 G~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRN 448 (609)
T KOG0200|consen 369 GACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARN 448 (609)
T ss_pred eeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhh
Confidence 99999999999999999999999998754 0 238889999999999999999999999999999999
Q ss_pred EEEecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccC--CCCcccchhhcCCCCCChh
Q 001902 798 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVG--TEEYIAPEIIAGAGHTSAV 875 (998)
Q Consensus 798 ILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--t~~y~aPE~l~~~~~~~~s 875 (998)
||+..+..+||+|||+|+....... .....-.| ...|||||.+....|+.++
T Consensus 449 VLi~~~~~~kIaDFGlar~~~~~~~--------------------------y~~~~~~~~LP~kWmApEsl~~~~ft~kS 502 (609)
T KOG0200|consen 449 VLITKNKVIKIADFGLARDHYNKDY--------------------------YRTKSSAGTLPVKWMAPESLFDRVFTSKS 502 (609)
T ss_pred EEecCCCEEEEccccceeccCCCCc--------------------------eEecCCCCccceeecCHHHhccCcccccc
Confidence 9999999999999999964321110 00011112 3359999999999999999
Q ss_pred HHHHHHHHHHHHHc-CCCCCCCCC-hHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 876 DWWALGILLYEMLY-GYTPFRGKT-RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 876 DIwSlG~il~eLlt-G~~Pf~~~~-~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
||||||++|||+++ |..||.+.. ..+.+. .++..........++.++.++++.||+.+|.+||++.+....+-.|
T Consensus 503 DVWSfGI~L~EifsLG~~PYp~~~~~~~l~~-~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 503 DVWSFGILLWEIFTLGGTPYPGIPPTEELLE-FLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred hhhHHHHHHHHHhhCCCCCCCCCCcHHHHHH-HHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 99999999999997 999999865 444444 4444444445556789999999999999999999999877766665
No 399
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=3.2e-28 Score=265.45 Aligned_cols=244 Identities=23% Similarity=0.347 Sum_probs=189.3
Q ss_pred ccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC--CCCCccceeEEEeeCC--
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML--DHPFVPALYASFQTKT-- 738 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l--~h~nIv~l~~~~~~~~-- 738 (998)
+....+++..||+|.||.||+|.. +++.||||++... ....+.+|.+|++.. .|+||+++++.-....
T Consensus 208 ~l~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~~------~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~ 279 (534)
T KOG3653|consen 208 ELDPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPEQ------EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTAD 279 (534)
T ss_pred cCCchhhHHHhhcCccceeehhhc--cCceeEEEecCHH------HHHHHHhHHHHHhccCccchhHHHhhchhccCCcc
Confidence 356778889999999999999998 5699999998753 457788898888764 8999999998776544
Q ss_pred --eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---------CceeccCCCCcEEEecCCcEE
Q 001902 739 --HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ---------GIIYRDLKPENVLLQGNGHVS 807 (998)
Q Consensus 739 --~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~---------~IiHrDLkP~NILi~~~g~vk 807 (998)
.++||++|.+.|+|.++|+.+ .+++.....++..|++||+|||.- .|+|||||..||||..|+++.
T Consensus 280 ~~eywLVt~fh~kGsL~dyL~~n---tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTcc 356 (534)
T KOG3653|consen 280 RMEYWLVTEFHPKGSLCDYLKAN---TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCC 356 (534)
T ss_pred ccceeEEeeeccCCcHHHHHHhc---cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEE
Confidence 899999999999999999885 489999999999999999999952 599999999999999999999
Q ss_pred EEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCC-CC-----ChhHHHHHH
Q 001902 808 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HT-----SAVDWWALG 881 (998)
Q Consensus 808 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-~~-----~~sDIwSlG 881 (998)
|+|||+|..+.. ..+......-+||..|||||+|.+.- +. .+.||||+|
T Consensus 357 IaDFGLAl~~~p-------------------------~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamg 411 (534)
T KOG3653|consen 357 IADFGLALRLEP-------------------------GKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMG 411 (534)
T ss_pred eeccceeEEecC-------------------------CCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHH
Confidence 999999966431 11122334478999999999997642 22 278999999
Q ss_pred HHHHHHHcCCCC------------CC-----CCChHHHHHHHHhC--CCCCCCCCC---CcHHHHHHHHHccccCccCcC
Q 001902 882 ILLYEMLYGYTP------------FR-----GKTRQKTFANILHK--DLKFPSSTP---TSLHAKQLMYRLLHRDPKSRL 939 (998)
Q Consensus 882 ~il~eLltG~~P------------f~-----~~~~~~~~~~i~~~--~~~~~~~~~---~s~~l~~Ll~~~L~~dP~~Rp 939 (998)
.+||||++.... |. .....++...+++. ...+|+... .-.-+.+.+.-||..||+.|+
T Consensus 412 LVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARL 491 (534)
T KOG3653|consen 412 LVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARL 491 (534)
T ss_pred HHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhh
Confidence 999999964432 22 12222333333332 333443321 123467899999999999999
Q ss_pred CCh
Q 001902 940 GSH 942 (998)
Q Consensus 940 t~~ 942 (998)
|+.
T Consensus 492 TA~ 494 (534)
T KOG3653|consen 492 TAG 494 (534)
T ss_pred hhH
Confidence 954
No 400
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1e-27 Score=259.64 Aligned_cols=243 Identities=23% Similarity=0.356 Sum_probs=184.7
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHh--CCCCCccceeEEEeeC----C
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDM--LDHPFVPALYASFQTK----T 738 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~--l~h~nIv~l~~~~~~~----~ 738 (998)
.+..+.+.||+|.||.||++.+ -|..||||++... +.....+|.+|+.. |+|+||+.+++.-..+ .
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~sr------dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~T 282 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSR------DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWT 282 (513)
T ss_pred heeEEEEEecCccccceeeccc--cCCceEEEEeccc------chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceE
Confidence 4577889999999999999998 5789999999743 22456677777765 5999999998865433 3
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CceeccCCCCcEEEecCCcEEEEe
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ--------GIIYRDLKPENVLLQGNGHVSLTD 810 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~--------~IiHrDLkP~NILi~~~g~vkL~D 810 (998)
.+|||++|.+.|||+|+|.+. .++.+...+++..++.||++||-. .|.|||||..|||+.++|.+-|+|
T Consensus 283 QLwLvTdYHe~GSL~DyL~r~---tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IAD 359 (513)
T KOG2052|consen 283 QLWLVTDYHEHGSLYDYLNRN---TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 359 (513)
T ss_pred EEEEeeecccCCcHHHHHhhc---cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEee
Confidence 689999999999999999884 489999999999999999999953 499999999999999999999999
Q ss_pred ccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCC------CChhHHHHHHHHH
Q 001902 811 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH------TSAVDWWALGILL 884 (998)
Q Consensus 811 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~------~~~sDIwSlG~il 884 (998)
+|+|.......... .-..+..+||..|||||+|...-. ...+||||||.++
T Consensus 360 LGLAv~h~~~t~~i-----------------------di~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVl 416 (513)
T KOG2052|consen 360 LGLAVRHDSDTDTI-----------------------DIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVL 416 (513)
T ss_pred ceeeEEecccCCcc-----------------------cCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHH
Confidence 99996544321110 112345689999999999965421 2379999999999
Q ss_pred HHHHc----------CCCCCCCC----ChHHHHHHHHh---CCCCCCCCCCCcH---HHHHHHHHccccCccCcCCC
Q 001902 885 YEMLY----------GYTPFRGK----TRQKTFANILH---KDLKFPSSTPTSL---HAKQLMYRLLHRDPKSRLGS 941 (998)
Q Consensus 885 ~eLlt----------G~~Pf~~~----~~~~~~~~i~~---~~~~~~~~~~~s~---~l~~Ll~~~L~~dP~~Rpt~ 941 (998)
||++. -++||.+- .+.+.+.+++- -....|......+ .+-+|++-||..||..|.|+
T Consensus 417 WEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltA 493 (513)
T KOG2052|consen 417 WEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTA 493 (513)
T ss_pred HHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHH
Confidence 99983 24688542 22344444432 2223333333333 34578999999999999993
No 401
>PRK09776 putative diguanylate cyclase; Provisional
Probab=99.95 E-value=1.3e-27 Score=312.84 Aligned_cols=372 Identities=14% Similarity=0.138 Sum_probs=275.2
Q ss_pred ccccccccccchHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHH
Q 001902 176 DEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRE 255 (998)
Q Consensus 176 ~~~~~e~~l~~~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~ 255 (998)
..++.++.+++++++|+.++++++++|+++|. +|+|+++|+++++++||+.+|++|+++..+.++++.......+..
T Consensus 270 ~~r~~~~~l~~~e~r~~~l~e~~~~~i~~~d~---dG~i~~~N~~~~~l~G~~~~el~g~~~~~~~~~~d~~~~~~~~~~ 346 (1092)
T PRK09776 270 AFRAERKHISESETRFRNAMEYSAIGMALVGT---EGQWLQVNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEK 346 (1092)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCceEEEEcC---CCcEEehhHHHHHHhCCCHHHHccCCceeccCcchhHhHHHHHHH
Confidence 34555677899999999999999999999998 888999999999999999999999998888887776655555555
Q ss_pred HHHcC-CcEEEEEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHHHhhcCCCCCchhhhhHHHHHHHH
Q 001902 256 TLQNG-QSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEM 334 (998)
Q Consensus 256 ~l~~g-~~~~~e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~~l~~~~~~L~~~l~~~d~~~~~~ 334 (998)
.+..+ ..+..+.+..++||+.+|+..+.+++.+.+|.+.+++++++|||++|++|++++...+.
T Consensus 347 ~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~~~~~~g~~~~~i~~~~DITerk~~e~~l~~~~~~--------------- 411 (1092)
T PRK09776 347 LLSGEINSYSMEKRYYRRDGEVVWALLAVSLVRDTDGTPLYFIAQIEDINELKRTEQVNERLMER--------------- 411 (1092)
T ss_pred HHcCCccceeeeeEEEcCCCCEEEEEEEEEEEECCCCCEeeehhhHHhhHHHHHHHHHHHHHHHH---------------
Confidence 54443 34678899999999999999999999999999999999999999999999886542111
Q ss_pred hHhhHHHHHHHcc-CCCCccccCCCCcccccCCCCchhhhcccccCCC--CCCCCCCCCCCCCCC--cccccccccccch
Q 001902 335 ATSSVTELVQAMK-KPRSLSESTNRPPIIRKSEGGVEEERAGALGRRK--SENVPPPRRNSYGGG--CRTSMQRISEVPE 409 (998)
Q Consensus 335 ~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~g~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 409 (998)
+..+.++.. ..+..+..+..+..+......+||+.++..+... ..+.|++ +...... ........-..+.
T Consensus 412 ----~~~~~~~~~~~i~~~d~~~~~~~~n~~~~~l~G~~~~~~~~~~~~~~~~~p~d-~~~~~~~~~~~~~~~~~~~~e~ 486 (1092)
T PRK09776 412 ----ITLANEAGGIGIWEWDLKPNIISWDKRMFELYEIPPHIKPTWQVWYACLHPED-RQRVEKEIRDALQGRSPFKLEF 486 (1092)
T ss_pred ----HHHHHHhcCceEEEEecCCCeEeeCHHHHHHhCCCcccCCCHHHHHHhcCHhH-HHHHHHHHHHHHhcCCCeeEEE
Confidence 111111211 2344555566677788888888888877433211 1112211 1000000 0001112234556
Q ss_pred hhccccCCccccccccccccCCCCCCCccccccccCCCCCCCCCCCCCchhhHHHHHhhhccc-cHHHHHhhcCceEEEE
Q 001902 410 KKKQKSGRRSFMGLIGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGI-DLATTLERIEKNFVIT 488 (998)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~er~~~e~e~r~~~-~l~~i~e~~~d~i~i~ 488 (998)
+...++| ..|+...+.+..+.+|.......+ .+||++|++.++++++.. .++.++++++++|+++
T Consensus 487 r~~~~dG-~~w~~~~~~~~~d~~G~~~~~ig~-------------~~DITerk~~e~~L~~~~~~l~~~l~~~~~~i~~~ 552 (1092)
T PRK09776 487 RIVVKDG-VRHIRALANRVLNKDGEVERLLGI-------------NMDMTEVRQLNEALFQEKERLHITLDSIGEAVVCT 552 (1092)
T ss_pred EEEcCCc-eEEEEEeeEEEECCCCCEEEEEee-------------eeehhHHHHHHHHHHHHHHHHHHHHhccccEEEEE
Confidence 6678899 999998887777777765543333 789999999888887643 5889999999999999
Q ss_pred cCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCC--CCHHHHHHHHHHHhcCCc--EEEEEEEEecCCcEEEEEE
Q 001902 489 DPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPE--TDPATVRKIRAAIDNQTD--VTVQLINYTKSGKKFWNLF 564 (998)
Q Consensus 489 D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~--~~~~~~~~i~~~l~~g~~--~~~e~~~~rkdG~~~wv~~ 564 (998)
|.+|+ |+++|+++++++||+.+|++|++...+.+.. ........+......... +..+....++||+.+|+.+
T Consensus 553 D~~g~---i~~~N~a~~~l~G~~~~e~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 629 (1092)
T PRK09776 553 DMAMK---VTFMNPVAEKMTGWTQEEALGVPLLTVLHITFGDNGPLMENIYSCLTSRSAAYLEQDVVLHCRSGGSYDVHY 629 (1092)
T ss_pred CCCCe---EEEEcHHHHHHhCCCHHHHcCCCHHHHcccccCCcchhhHHHHHHHhcCCCccccceEEEEeCCCcEEEEEE
Confidence 99887 9999999999999999999999966554322 222222334444444443 5567788999999999999
Q ss_pred EEeeeccCC----EEEEEEecCCcccc
Q 001902 565 HLQPMRDQK----YFIGVQLDGSEHLE 587 (998)
Q Consensus 565 ~~spi~d~~----~~vgi~rDITerk~ 587 (998)
+.+|+.+.+ +++++++|||++|+
T Consensus 630 ~~~pi~~~~g~~~g~v~~~~DITe~k~ 656 (1092)
T PRK09776 630 SITPLSTLDGENIGSVLVIQDVTESRK 656 (1092)
T ss_pred EeeeeecCCCCEEEEEEEEEecchHHH
Confidence 999999776 78999999999986
No 402
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=2.9e-26 Score=239.04 Aligned_cols=213 Identities=39% Similarity=0.646 Sum_probs=185.0
Q ss_pred cCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEecCCCCch
Q 001902 673 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 752 (998)
Q Consensus 673 LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ggsL 752 (998)
||+|++|.||++.+..+++.+++|++....... ....+.+|+.+++.+.|++|+++++++......+++|||+++++|
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l 78 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSL 78 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcH
Confidence 689999999999998889999999988653211 346788999999999999999999999999999999999998999
Q ss_pred hHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec-CCcEEEEeccCccccCCCCCCCCCcchhh
Q 001902 753 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKPQLLLPTTNEK 831 (998)
Q Consensus 753 ~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~-~g~vkL~DFG~a~~~~~~~~~~~~~~~~~ 831 (998)
.+++.... ..++...+..++.+++.+|.+||+.|++|+||+|.||+++. ++.++|+|||.+........
T Consensus 79 ~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--------- 148 (215)
T cd00180 79 KDLLKENE-GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--------- 148 (215)
T ss_pred HHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc---------
Confidence 99987642 35899999999999999999999999999999999999998 89999999999854321110
Q ss_pred hhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCC
Q 001902 832 KRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 910 (998)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~~~ 910 (998)
......+...|++||.+... .++.+.|+|++|+++++|
T Consensus 149 ------------------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l----------------------- 187 (215)
T cd00180 149 ------------------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL----------------------- 187 (215)
T ss_pred ------------------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------
Confidence 12234578899999999887 788899999999999999
Q ss_pred CCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCC
Q 001902 911 LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHP 952 (998)
Q Consensus 911 ~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp 952 (998)
..+.+++.+|+..+|.+||+ +.++++|+
T Consensus 188 ----------~~~~~~l~~~l~~~p~~R~~----~~~l~~~~ 215 (215)
T cd00180 188 ----------PELKDLIRKMLQKDPEKRPS----AKEILEHL 215 (215)
T ss_pred ----------HHHHHHHHHHhhCCcccCcC----HHHHhhCC
Confidence 46889999999999999999 89998875
No 403
>TIGR02040 PpsR-CrtJ transcriptional regulator PpsR. This model represents the transcriptional regulator PpsR which is strictly associated with photosynthetic proteobacteria and found in photosynthetic operons. PpsR has been reported to be a repressor. These proteins contain a Helix-Turn_Helix motif of the "fis" type (pfam02954).
Probab=99.94 E-value=6.2e-27 Score=275.64 Aligned_cols=357 Identities=13% Similarity=0.036 Sum_probs=230.8
Q ss_pred HHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCC-cEEEEEEEEecC
Q 001902 195 LSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ-SYCGRLLNYKKD 273 (998)
Q Consensus 195 ld~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~-~~~~e~~~~~kd 273 (998)
++.++|+++++|. +|+|++||.++++++||+.+|++|+++..+++++........+...+..+. .+..+.....++
T Consensus 2 ~~~~~d~~~~~d~---~g~i~~~n~~~~~~~g~~~~el~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 78 (442)
T TIGR02040 2 LATAADVTLLLDA---EGVVREVAANPHHPSFEQLSEWEGRRWEEIVTAESVEKFELRLSEALRTGRGAVRVELNHIDPS 78 (442)
T ss_pred CcccCcEEEEECC---CCcEEEEEECCCcccccccccCCCCcHhHhhCcchHHHHHHHHHHHhccCCCcceEeeccCCCC
Confidence 5778999999999 777999999999999999999999999988887765555555556666654 455666656677
Q ss_pred CCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHHHhhcCCCCCchhhhhHHHHHHHHhHhhHHHHHHHcc-CCCCc
Q 001902 274 GTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMK-KPRSL 352 (998)
Q Consensus 274 G~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~~l~~~~~~L~~~l~~~d~~~~~~~~~~~~~~~~~l~-~~~~~ 352 (998)
|..+|+.++..++.+ + .+++++.+|||++++.+.++......+.+ +.....-....+..+..... .....
T Consensus 79 g~~~~~~~~~~~~~~--~--~~~~~i~rDi~~~~~~~~~l~~~~~~~e~-----~~~~l~~~e~r~~~l~e~~~~~i~~~ 149 (442)
T TIGR02040 79 SFELPMRFILVRLGA--D--RGVLALGRDLRAVAELQQQLVAAQQAMER-----DYWTLREMETRYRVVLEVSSDAVLLV 149 (442)
T ss_pred CCccCeEEEEEEeCC--C--CeEEEEecccHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHhhCCceEEEE
Confidence 777777777666643 2 26688999999988876554221111110 00000111122233333333 23444
Q ss_pred cc-cCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCCCCCC---cccccccccccchhhccccCCccccccccccc
Q 001902 353 SE-STNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGG---CRTSMQRISEVPEKKKQKSGRRSFMGLIGRKS 428 (998)
Q Consensus 353 ~~-~~~~~~~~~~~~~~~~~~~~e~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (998)
+. .+.+++.|..+...+||+++|++|++..++++.+........ ....+. ....... .+.+...| .+..+..
T Consensus 150 d~~~g~i~~~N~a~~~l~G~~~~el~g~~~~~~~~~~~~~~~~~~l~~~~~~g~-~~~~~~~--~~~~~~~~-~~~~~~~ 225 (442)
T TIGR02040 150 DMSTGRIVEANSAAAALLGGVGQSLVGRAFPQEFEGRRREELMLTLRNVRATGS-AAPVRIL--LRRSQKRL-LVVVSVF 225 (442)
T ss_pred ECCCCEEEEEcHHHHHHhCcCHHHHcCCCHHHhCCHHHHHHHHHHHHHHHhcCC-CcceEEE--EcCCCeEE-EEEEEEE
Confidence 43 466778999999999999999999998888765322111100 011111 1111111 11121222 1111111
Q ss_pred cCCCCCCCccccccccCCCCCCCCCCCCCchhhHHHHHhhhccccHHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHc
Q 001902 429 QSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELT 508 (998)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~er~~~e~e~r~~~~l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~ 508 (998)
.. ++...+. ....||++++..+.++++ .|+.++++++++|+++|.+|+ |++||++|++++
T Consensus 226 ~~-~~~~~~l--------------~~~~dit~~~~~e~~~~~--~~~~l~e~~~d~I~v~D~~G~---I~~~N~a~~~l~ 285 (442)
T TIGR02040 226 RQ-DGESLFL--------------CQLSPAGATQPVGDELSE--NLARLYHEAPDAIVFSDADGT---IRGANEAFLELT 285 (442)
T ss_pred Ee-CCceEEE--------------EEEcccchhhhhhHHHHH--HHHHHHHhCCceEEEEcCCCc---EEehhHHHHHHh
Confidence 11 1111111 124567777665554431 388999999999999999888 999999999999
Q ss_pred CCC-hhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCcEEEEEEEEeeeccCC--EEEEEEecCCcc
Q 001902 509 EYS-REEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQK--YFIGVQLDGSEH 585 (998)
Q Consensus 509 Gy~-~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~~rkdG~~~wv~~~~spi~d~~--~~vgi~rDITer 585 (998)
||+ .++++|++...+.++.... ....+......|.....+..+.++||+.+|++++++|+.+.+ .++++++|||+|
T Consensus 286 G~~~~~~l~G~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~ve~s~~~i~~~~~~~~~~v~rDITeR 364 (442)
T TIGR02040 286 DSSSLEAVRGRTLDRWLGRGGVD-LRVLLSNVRRTGQVRLYATTLTGEFGAQTEVEISAAWVDQGERPLIVLVIRDISRR 364 (442)
T ss_pred CCCChHHHcCCCHHHHhCCCccc-HHHHHHHHhhcCceEEEEEEEEcCCCCEEEEEEEEEEeccCCceEEEEEEecchhh
Confidence 997 6789999976555533221 222233333445455677788999999999999999998776 899999999999
Q ss_pred ccc
Q 001902 586 LEP 588 (998)
Q Consensus 586 k~~ 588 (998)
|+.
T Consensus 365 ~~~ 367 (442)
T TIGR02040 365 LTM 367 (442)
T ss_pred ccC
Confidence 974
No 404
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=7.9e-26 Score=239.74 Aligned_cols=215 Identities=37% Similarity=0.610 Sum_probs=180.5
Q ss_pred cccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEec
Q 001902 667 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 746 (998)
Q Consensus 667 y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~ 746 (998)
|.+.+.||.|++|.||++.+..+++.+++|.+...... .....+.+|+..++.++|+|++++++++......++++||
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~ 78 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEY 78 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEec
Confidence 56778999999999999999888999999998865322 2457788899999999999999999999999999999999
Q ss_pred CCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCC
Q 001902 747 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 826 (998)
Q Consensus 747 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~ 826 (998)
+++++|.+++...... ++...+..++.+++.+|.+||+++++|+||+|+||+++.++.++|+|||.+.......
T Consensus 79 ~~~~~L~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~----- 152 (225)
T smart00221 79 CEGGDLFDYLRKKGGK-LSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDL----- 152 (225)
T ss_pred cCCCCHHHHHHhcccC-CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc-----
Confidence 9999999999875321 7899999999999999999999999999999999999999999999999885543111
Q ss_pred cchhhhhcccCCCCcccccccccccccccCCCCcccchhh-cCCCCCChhHHHHHHHHHHHHHcCCCCCCC-CChH-HHH
Q 001902 827 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII-AGAGHTSAVDWWALGILLYEMLYGYTPFRG-KTRQ-KTF 903 (998)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l-~~~~~~~~sDIwSlG~il~eLltG~~Pf~~-~~~~-~~~ 903 (998)
........++..|++||.+ ....++.++|+|+||+++|+|++|+.||.. .+.. ...
T Consensus 153 ---------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~ 211 (225)
T smart00221 153 ---------------------AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLS 211 (225)
T ss_pred ---------------------cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHH
Confidence 0011234678899999998 667778899999999999999999999988 5555 455
Q ss_pred HHHHhCC
Q 001902 904 ANILHKD 910 (998)
Q Consensus 904 ~~i~~~~ 910 (998)
+.+..+.
T Consensus 212 ~~~~~~~ 218 (225)
T smart00221 212 DVWSFGV 218 (225)
T ss_pred HHHhcCC
Confidence 5555443
No 405
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=3.4e-27 Score=240.27 Aligned_cols=253 Identities=23% Similarity=0.331 Sum_probs=193.4
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEE-EeeCCeEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYAS-FQTKTHVC 741 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~-~~~~~~~~ 741 (998)
.+.|.+.+.||+|-||.+.+|+++.++..+++|.+.+... ....+.+|...--.| .|.||+.-|++ |+..+..+
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t----t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Yv 98 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT----TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYV 98 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh----hHHHHHHHhccceeeccchhhhHHHHHHhhcCceEE
Confidence 4679999999999999999999999999999999876432 346677777654445 58999988774 67788899
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec--CCcEEEEeccCccccCC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG--NGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~--~g~vkL~DFG~a~~~~~ 819 (998)
++|||++-|+|.+-+... .+.+...+.++.|+++||.|||++++||||||.+||||-. ...|||||||.+...+.
T Consensus 99 F~qE~aP~gdL~snv~~~---GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~ 175 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVEAA---GIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT 175 (378)
T ss_pred EeeccCccchhhhhcCcc---cccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCc
Confidence 999999999999887653 3889999999999999999999999999999999999953 45899999999855331
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-----CCCChhHHHHHHHHHHHHHcCCCCC
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-----GHTSAVDWWALGILLYEMLYGYTPF 894 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-----~~~~~sDIwSlG~il~eLltG~~Pf 894 (998)
. -...-.+..|.+||..... ...+.+|||.||+++|.+++|++||
T Consensus 176 t------------------------------V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PW 225 (378)
T KOG1345|consen 176 T------------------------------VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPW 225 (378)
T ss_pred e------------------------------ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcc
Confidence 1 0112245678999987432 2467899999999999999999999
Q ss_pred CCCCh----HHHHHHHHhC-CCCCCC-CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 895 RGKTR----QKTFANILHK-DLKFPS-STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 895 ~~~~~----~~~~~~i~~~-~~~~~~-~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
..... .-.+.+...+ ....|. ....+..+..+.++-|..++.+|-...+ +....+..|.
T Consensus 226 Qka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~-~kk~rk~~w~ 290 (378)
T KOG1345|consen 226 QKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWT-AKKMRKCLWK 290 (378)
T ss_pred hhhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCcccccchhHH-HHHHHHHHHH
Confidence 74322 2233334433 334443 3457889999999999999999933222 4445555444
No 406
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.93 E-value=3.6e-26 Score=287.51 Aligned_cols=227 Identities=19% Similarity=0.262 Sum_probs=155.0
Q ss_pred CCC-CCccceeEEE-------eeCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q 001902 722 LDH-PFVPALYASF-------QTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL 793 (998)
Q Consensus 722 l~h-~nIv~l~~~~-------~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDL 793 (998)
+.| .||..++++| .....++++|||+ +++|.+++... ...++...++.++.||++||.|||++|||||||
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDl 106 (793)
T PLN00181 29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNV 106 (793)
T ss_pred hhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhCCeeeccC
Confidence 344 5777777776 2334678889988 77999999753 345999999999999999999999999999999
Q ss_pred CCCcEEEecCCcEEEEeccCccccCCCCCCCCCcchh-hhhcccCCC-C-----ccccccc-ccccccccCCCCcccchh
Q 001902 794 KPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE-KKRRHKGQQ-N-----PVFMAEP-MRASNSFVGTEEYIAPEI 865 (998)
Q Consensus 794 kP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~-~~~~~~~~~-~-----~~~~~~~-~~~~~~~~gt~~y~aPE~ 865 (998)
||+||||+..|.+|++|||++..............+- ..+...... . ......+ .......+||+.|||||+
T Consensus 107 KP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~ 186 (793)
T PLN00181 107 RPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEE 186 (793)
T ss_pred CchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhh
Confidence 9999999887888888887765432211100000000 000000000 0 0000000 011223579999999999
Q ss_pred hcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcH
Q 001902 866 IAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGA 945 (998)
Q Consensus 866 l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a 945 (998)
+.+..++.++|||||||+||||++|.+|+.... ..+..+.....+ +..........+++.+||+.+|.+||+ +
T Consensus 187 ~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~L~~~P~~Rps----~ 259 (793)
T PLN00181 187 DNGSSSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRVLP-PQILLNWPKEASFCLWLLHPEPSCRPS----M 259 (793)
T ss_pred hccCCCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhhcC-hhhhhcCHHHHHHHHHhCCCChhhCcC----h
Confidence 999999999999999999999999998876432 122222222111 111123456678999999999999999 9
Q ss_pred HHHHcCCCccCC
Q 001902 946 NEIKKHPFFKGV 957 (998)
Q Consensus 946 ~elL~Hp~f~~~ 957 (998)
.++|+||||...
T Consensus 260 ~eil~h~~~~~~ 271 (793)
T PLN00181 260 SELLQSEFINEP 271 (793)
T ss_pred HHHhhchhhhhh
Confidence 999999999864
No 407
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.92 E-value=2.3e-26 Score=260.86 Aligned_cols=261 Identities=41% Similarity=0.705 Sum_probs=221.2
Q ss_pred ccCCCCceeEEEEEEc---cCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCccceeEEEeeCCeEEEEEecC
Q 001902 672 PLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLITDYC 747 (998)
Q Consensus 672 ~LG~G~~g~Vy~a~~~---~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lV~E~~ 747 (998)
.+|.|+||.|++++-. ..|..||+|+.++......... ....|..++..++ ||++++++..|+.+...+++++|.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~ 79 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL 79 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence 3799999999988752 3478899999987655544444 5667888998886 999999999999999999999999
Q ss_pred CCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCc
Q 001902 748 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 827 (998)
Q Consensus 748 ~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~ 827 (998)
.||.|...+... ..+.+...+.+...++-+++++|+.+|+|||+|++||+++.+|++++.|||+++....
T Consensus 80 rgg~lft~l~~~--~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~-------- 149 (612)
T KOG0603|consen 80 RGGDLFTRLSKE--VMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVK-------- 149 (612)
T ss_pred ccchhhhccccC--CchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHh--------
Confidence 999999888664 4488889999999999999999999999999999999999999999999999865321
Q ss_pred chhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHH
Q 001902 828 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANIL 907 (998)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~ 907 (998)
....|||..|||||++. .+...+|.||||+++++|++|..||.+ +....|.
T Consensus 150 -----------------------~~~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il 200 (612)
T KOG0603|consen 150 -----------------------EKIACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRIL 200 (612)
T ss_pred -----------------------hhhcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHh
Confidence 11128999999999998 677899999999999999999999988 6777777
Q ss_pred hCCCCCCCCCCCcHHHHHHHHHccccCccCcCCCh-hcHHHHHcCCCccCCChhhhhcCCCCCCCCCC
Q 001902 908 HKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPL 974 (998)
Q Consensus 908 ~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p~ 974 (998)
+..+..|. ..+..+++++..++..+|.+|.... +++.++++|+||+.++|..+....++....|.
T Consensus 201 ~~~~~~p~--~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~~l~~r~~~~~fkp~ 266 (612)
T KOG0603|consen 201 KAELEMPR--ELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWNELEARSRPPPFKPG 266 (612)
T ss_pred hhccCCch--hhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHhhHhhcCCCCCCCCc
Confidence 76655554 4688999999999999999999875 67999999999999999988665555554444
No 408
>PRK13560 hypothetical protein; Provisional
Probab=99.92 E-value=1.5e-24 Score=274.92 Aligned_cols=373 Identities=10% Similarity=0.037 Sum_probs=263.3
Q ss_pred ccccccccccchHHHH-HHHHHhcCCcEEEEecCCCCCce--EEccHHHHHHcCCChhhhcCCC--CCcccCCCCChHHH
Q 001902 176 DEGGKEKGLPRVSDIV-KDALSTFQQTFVVSDATKPDYPI--MYASAGFFKMTGYTSKEVVGRN--CRFLQGAGTDPEDV 250 (998)
Q Consensus 176 ~~~~~e~~l~~~~~~l-~~ild~~~d~i~i~D~~g~dG~I--~~vN~a~~~l~Gys~eEliG~~--~~~l~~~~~~~~~~ 250 (998)
.++.++++++++++.+ +.+++++|+++++.+..+ +|.+ .|++++...++||...++++.. +..+++|++.....
T Consensus 54 ~r~~~~~~l~~~~e~~~r~l~~~~p~~i~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~d~~~~~ 132 (807)
T PRK13560 54 ARAIAEAEAQDCREQCERNLKANIPGGMFLFALDG-DGTFSFPSLLDANGELAAIAKHDLMADKGLLAMLIGGDDGDFFF 132 (807)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEEcC-ccccccceeeccchhHHHhcCcccCCccchhhhhcCCCcchhhh
Confidence 3556778888888888 999999999999988732 3443 3478888888888888877543 33566666654433
Q ss_pred -------HHHHHHHHcCCcEEEEEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHHHhhcCCCCCchh
Q 001902 251 -------AKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPES 323 (998)
Q Consensus 251 -------~~i~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~~l~~~~~~L~~~ 323 (998)
+.+..++..+.....+++++++||+ |+.....|..+.+|.+ .+.|+++|||++|++|++++.+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~e~r~~~~dg~--~~~~~~~~~~~~~g~~-~~~g~~~DIT~rk~ae~~l~~~------- 202 (807)
T PRK13560 133 ANPFRSAETIAMALQSDDWQEEEGHFRCGDGR--FIDCCLRFERHAHADD-QVDGFAEDITERKRAEERIDEA------- 202 (807)
T ss_pred hChhhHHHHHHHHhccCcccceEEEEEeCCcc--EEEEEeeeeecCCCce-EEEEEEEccchHHHHHHHHHHH-------
Confidence 2333344455556788899999996 6667788888888875 6899999999999999886642
Q ss_pred hhhHHHHHHHHhHhhHHHHHHHcc-CCCCccccCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCCCCCC--cccc
Q 001902 324 LIRYDARQKEMATSSVTELVQAMK-KPRSLSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGG--CRTS 400 (998)
Q Consensus 324 l~~~d~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~g~~~~~~~~~~~~~~~~~~--~~~~ 400 (998)
...+..+..... .....+..+.+++.|..+...+||+++|++|+...++.|......+... ....
T Consensus 203 ------------~~~l~~l~e~~~~~i~~~d~~g~i~~~N~~~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~ 270 (807)
T PRK13560 203 ------------LHFLQQLLDNIADPAFWKDEDAKVFGCNDAACLACGFRREEIIGMSIHDFAPAQPADDYQEADAAKFD 270 (807)
T ss_pred ------------HHHHHHHHhhCCCeEEEEcCCCCEEEEhHHHHHHhCCCHHHHcCCcchhcCCcchhHHHHHHHHHHhc
Confidence 111222333333 3345566678889999999999999999999999999876432222100 0011
Q ss_pred cccccccchhhccccCCccccccccc--cccCCCCCCCccccccccCCCCCCCCCCCCCchhhHHHHHhhhccc-cHHHH
Q 001902 401 MQRISEVPEKKKQKSGRRSFMGLIGR--KSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGI-DLATT 477 (998)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~er~~~e~e~r~~~-~l~~i 477 (998)
.......+..+..++|...|+.+..+ +..+..+....... ..+||++|++.|++++... .|+.+
T Consensus 271 ~~~~~~~e~~~~~~dG~~~~~~~~~~~~~~~~~~g~~~g~~~-------------~~~DITerk~~e~~L~~se~~l~~l 337 (807)
T PRK13560 271 ADGSQIIEAEFQNKDGRTRPVDVIFNHAEFDDKENHCAGLVG-------------AITDISGRRAAERELLEKEDMLRAI 337 (807)
T ss_pred cCCceEEEEEEEcCCCCEEEEEEEecceEEEcCCCCEEEEEE-------------EEEechHHHHHHHHHHHHHHHHHHH
Confidence 11223345566788999886655432 33344444333332 3689999999999887644 58999
Q ss_pred HhhcCceEEEEcCCCCCCCEEEc-CHHHHHHcCCChhhhcCCCCccccCCCCCHHH-----------------HHHHHHH
Q 001902 478 LERIEKNFVITDPRLPDNPIIFA-SDSFLELTEYSREEILGRNCRFLQGPETDPAT-----------------VRKIRAA 539 (998)
Q Consensus 478 ~e~~~d~i~i~D~~G~d~~I~~v-N~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~-----------------~~~i~~~ 539 (998)
+++++++|+++|.+|. ++++ |+++++++||+.+|++|++...+.+....... ...+...
T Consensus 338 ~~~~~~~i~~~d~~g~---i~~~nn~~~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (807)
T PRK13560 338 IEAAPIAAIGLDADGN---ICFVNNNAAERMLGWSAAEVMGKPLPGMDPELNEEFWCGDFQEWYPDGRPMAFDACPMAKT 414 (807)
T ss_pred HHhCcccEEEEcCCCC---EEEecCHHHHHHhCCCHHHHcCCCccccChhhhhhhhhchhhhcCCcCCcchhhhhhHHHH
Confidence 9999999999999877 9987 67888899999999999986544332211110 0112334
Q ss_pred HhcCCcE-EEEEEEEecCCcEEEEEEEEeeeccCC----EEEEEEecCCcccc
Q 001902 540 IDNQTDV-TVQLINYTKSGKKFWNLFHLQPMRDQK----YFIGVQLDGSEHLE 587 (998)
Q Consensus 540 l~~g~~~-~~e~~~~rkdG~~~wv~~~~spi~d~~----~~vgi~rDITerk~ 587 (998)
+..+..+ ..++...++||..+|+.++..|+.+.+ +++++++|||+||+
T Consensus 415 ~~~~~~~~~~e~~~~~~~g~~~~~~~~~~p~~d~~g~~~~~~~~~~DITerk~ 467 (807)
T PRK13560 415 IKGGKIFDGQEVLIEREDDGPADCSAYAEPLHDADGNIIGAIALLVDITERKQ 467 (807)
T ss_pred HhcCCcccCceEEEEcCCCCeEEEEEEEeeeECCCCCEEEEEEEeehhhhHHH
Confidence 5555543 357888999999999999999999876 78999999999996
No 409
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.92 E-value=2.4e-24 Score=229.11 Aligned_cols=255 Identities=17% Similarity=0.162 Sum_probs=203.1
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCC-----eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEe-
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSG-----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ- 735 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~-----~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~- 735 (998)
+...+++....+-+|.||.||.+.+.+.. +.+-+|.++.. ...-++..+..|..++..+.|||+.++.++..
T Consensus 281 v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~--AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie 358 (563)
T KOG1024|consen 281 VQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH--ASQIQVNLLLQESMLLYGASHPNLLSVLGVSIE 358 (563)
T ss_pred hhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc--ccHHHHHHHHHHHHHHhcCcCCCccceeEEEee
Confidence 44567888899999999999999775432 34556665533 23445678888999999999999999999875
Q ss_pred eCCeEEEEEecCCCCchhHHHhh------CCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEE
Q 001902 736 TKTHVCLITDYCPGGELFLLLDR------QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLT 809 (998)
Q Consensus 736 ~~~~~~lV~E~~~ggsL~~~l~~------~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~ 809 (998)
+....++++.++.-|.|..++.. .....++..++..++.|++.|++|||+.||||.||-..|.+|++.-.+||+
T Consensus 359 ~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVklt 438 (563)
T KOG1024|consen 359 DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLT 438 (563)
T ss_pred ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEec
Confidence 45678899999988999999972 223347777888899999999999999999999999999999999999999
Q ss_pred eccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc
Q 001902 810 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY 889 (998)
Q Consensus 810 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt 889 (998)
|=.+++..= +.+++ + .....-....||+||.+....|+.++|+||||++||||+|
T Consensus 439 DsaLSRDLF------P~DYh------------------c-LGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmt 493 (563)
T KOG1024|consen 439 DSALSRDLF------PGDYH------------------C-LGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMT 493 (563)
T ss_pred cchhccccC------ccccc------------------c-cCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHh
Confidence 999885421 11110 0 0011124567999999999999999999999999999997
Q ss_pred -CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhc
Q 001902 890 -GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 944 (998)
Q Consensus 890 -G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 944 (998)
|+.||...++.++..-+.. ...+.....++.++..++..||...|++||++.+.
T Consensus 494 lg~~PyaeIDPfEm~~ylkd-GyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Ql 548 (563)
T KOG1024|consen 494 LGKLPYAEIDPFEMEHYLKD-GYRLAQPFNCPDELFTVMACCWALLPEERPSFSQL 548 (563)
T ss_pred cCCCCccccCHHHHHHHHhc-cceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHH
Confidence 9999999998887665544 44555566789999999999999999999996553
No 410
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.91 E-value=4.3e-24 Score=218.56 Aligned_cols=161 Identities=25% Similarity=0.262 Sum_probs=128.7
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcch
Q 001902 750 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 829 (998)
Q Consensus 750 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~ 829 (998)
|+|.+++... +..+++..++.++.||+.||.|||+++ ||+|||++.++.+++ ||++.....
T Consensus 1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~---------- 61 (176)
T smart00750 1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTP---------- 61 (176)
T ss_pred CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecc----------
Confidence 6899999764 345999999999999999999999998 999999999999999 998854320
Q ss_pred hhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHHHh
Q 001902 830 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ-KTFANILH 908 (998)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~-~~~~~i~~ 908 (998)
....||+.|||||++.+..++.++|||||||++|+|++|..||...... ..+..+..
T Consensus 62 ----------------------~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~ 119 (176)
T smart00750 62 ----------------------EQSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLN 119 (176)
T ss_pred ----------------------ccCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHH
Confidence 1125899999999999999999999999999999999999999765432 33333333
Q ss_pred CCCCC-C----CCCCCcH--HHHHHHHHccccCccCcCCChhcHHHHHcCCCcc
Q 001902 909 KDLKF-P----SSTPTSL--HAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 955 (998)
Q Consensus 909 ~~~~~-~----~~~~~s~--~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 955 (998)
..... + .....+. .+.+|+.+||..||.+||+ +.++++|+|+.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~----~~~ll~~~~~~ 169 (176)
T smart00750 120 GMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREA----ANHYLAHCRAL 169 (176)
T ss_pred HhccCCccccccHHHHHhhhhHHHHHHHHHhcccccccC----HHHHHHHHHHH
Confidence 22111 0 1111222 5899999999999999999 99999999875
No 411
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=1.1e-23 Score=211.46 Aligned_cols=275 Identities=19% Similarity=0.248 Sum_probs=216.7
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCccceeEEEeeCCe
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTH 739 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~ 739 (998)
.+..+.|+++++||+|+||.+|++....+|..||+|+-+...- .-++..|..+.+.|. ...|+.+..++.+.++
T Consensus 11 ~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~-----hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~y 85 (341)
T KOG1163|consen 11 LIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK-----HPQLLYESKVYRILQGGVGIPHIRHYGTEKDY 85 (341)
T ss_pred heeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC-----CcchhHHHHHHHHhccCCCCchhhhhcccccc
Confidence 4557899999999999999999999999999999998765432 235667889999995 4789999999999999
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec---CCcEEEEeccCccc
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLSCL 816 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~---~g~vkL~DFG~a~~ 816 (998)
-.+||+.+ |.+|.+++.-- ...++...+..++-|++.-++|+|.+++|||||||+|+|+.- ...+.|+|||+|+.
T Consensus 86 nvlVMdLL-GPsLEdLfnfC-~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKk 163 (341)
T KOG1163|consen 86 NVLVMDLL-GPSLEDLFNFC-SRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKK 163 (341)
T ss_pred ceeeeecc-CccHHHHHHHH-hhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhh
Confidence 99999999 99999998743 234999999999999999999999999999999999999974 35789999999976
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCC
Q 001902 817 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 896 (998)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~ 896 (998)
+-.... ..+.+.+......||..|.+-....+...+...|+=|+|.+|.++..|.+||.+
T Consensus 164 y~d~~t--------------------~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQg 223 (341)
T KOG1163|consen 164 YRDIRT--------------------RQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQG 223 (341)
T ss_pred hccccc--------------------cccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccc
Confidence 532111 123344566778999999999888888889999999999999999999999988
Q ss_pred CC---hHHHHHHHHhCCCCCCCC---CCCcHHHHHHHHHccccCccCcCCChhcHHHH-------HcCCCccCCChhhhh
Q 001902 897 KT---RQKTFANILHKDLKFPSS---TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI-------KKHPFFKGVNWALVR 963 (998)
Q Consensus 897 ~~---~~~~~~~i~~~~~~~~~~---~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~el-------L~Hp~f~~~~~~~~~ 963 (998)
.. ....+++|....+..+.. ...+.++...|..|-..--.+-|.... +.++ |+|.+=--.||..+.
T Consensus 224 lka~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~y-lrqlFriLfr~ln~~~d~iyDW~~lk 302 (341)
T KOG1163|consen 224 LKAATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMY-LRQLFRILFRTLNHQYDYIYDWTMLK 302 (341)
T ss_pred cchhhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHH-HHHHHHHHHhhccccCCeEeeHHHHH
Confidence 54 345667777766555432 456778888888886665556666432 2333 344444447887774
No 412
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.90 E-value=2.8e-24 Score=254.07 Aligned_cols=242 Identities=38% Similarity=0.634 Sum_probs=188.5
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
.+|..++.|..|++|.||+++|+.+.+.+|+|+=+...+ +.+ |+....+|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~kiNkq~li--------lRn---ilt~a~npfvv---------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQNLI--------LRN---ILTFAGNPFVV---------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhcccccchh--------hhc---cccccCCccee----------------
Confidence 579999999999999999999999999999964332211 011 44455566555
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
|+-..+++.. +.++.+. +.+++|||+.||+|||+||+|.+|+.-|++|+.|||+++...-.....
T Consensus 136 -----gDc~tllk~~--g~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atn 200 (1205)
T KOG0606|consen 136 -----GDCATLLKNI--GPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATN 200 (1205)
T ss_pred -----chhhhhcccC--CCCcchh--------hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccch
Confidence 4444445443 2344332 779999999999999999999999999999999999987642111110
Q ss_pred -CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001902 825 -LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 903 (998)
Q Consensus 825 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~ 903 (998)
+.... +.. ...-....++|||.|.|||++....|...+|.|+||+|+|+++.|+.||.+.+..+.+
T Consensus 201 l~eg~I--~k~-----------t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelf 267 (1205)
T KOG0606|consen 201 LKEGHI--EKD-----------THEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELF 267 (1205)
T ss_pred hhhcch--HHH-----------HHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHH
Confidence 00000 000 0011345679999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCC-CCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhh
Q 001902 904 ANILHKDLKFPSS-TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 962 (998)
Q Consensus 904 ~~i~~~~~~~~~~-~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~ 962 (998)
..++...+.+|+. ....+++++++.++|+.+|..|.... .+-++.+|+||+.+||.-|
T Consensus 268 g~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~-ga~evk~h~ff~~LDw~~l 326 (1205)
T KOG0606|consen 268 GQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTG-GALEVKQHGFFQLLDWKSL 326 (1205)
T ss_pred hhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcccc-hhhhhhhccceeecccchh
Confidence 9999988888765 45678999999999999999998744 7889999999999999844
No 413
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=3.3e-23 Score=216.89 Aligned_cols=223 Identities=24% Similarity=0.334 Sum_probs=187.0
Q ss_pred ccccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeC
Q 001902 659 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK 737 (998)
Q Consensus 659 ~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~ 737 (998)
+-.+..-.|++.++||+|+||.++++.+.-++++||||.-... ...-++..|....+.| ..++|+.+|.+....
T Consensus 22 ~~~~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk-----S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG 96 (449)
T KOG1165|consen 22 GVLMVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK-----SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEG 96 (449)
T ss_pred CceEecccceeccccccCcceeeecccccccCceEEEEecccc-----CCcchHHHHHHHHHHHcCCCCCCceeeecccc
Confidence 3345567899999999999999999999999999999965432 2234667788888888 579999999988999
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecC-----CcEEEEecc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-----GHVSLTDFD 812 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~-----g~vkL~DFG 812 (998)
-+-.||||++ |.+|.|++.-. +..++...+..++.|++.-++|+|++.+|.|||||+|+||..- ..+.|+|||
T Consensus 97 ~~NiLVidLL-GPSLEDLFD~C-gR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFG 174 (449)
T KOG1165|consen 97 KYNILVIDLL-GPSLEDLFDLC-GRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFG 174 (449)
T ss_pred chhhhhhhhh-CcCHHHHHHHh-cCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEecc
Confidence 9999999999 99999998754 2459999999999999999999999999999999999999743 358999999
Q ss_pred CccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCC
Q 001902 813 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYT 892 (998)
Q Consensus 813 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~ 892 (998)
+|+.+...... .+.+.+.+.+..||..||+-....+...+.+.|+=|||-++++++.|.+
T Consensus 175 mAK~YrDp~Tk--------------------qHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsL 234 (449)
T KOG1165|consen 175 MAKEYRDPKTK--------------------QHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSL 234 (449)
T ss_pred chhhhcCcccc--------------------ccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCC
Confidence 99876432221 1345567888999999999999999999999999999999999999999
Q ss_pred CCCC---CChHHHHHHHHh
Q 001902 893 PFRG---KTRQKTFANILH 908 (998)
Q Consensus 893 Pf~~---~~~~~~~~~i~~ 908 (998)
||.+ .+..+.+.+|-.
T Consensus 235 PWQGLKA~tnK~kYeKIGe 253 (449)
T KOG1165|consen 235 PWQGLKADTNKEKYEKIGE 253 (449)
T ss_pred ccccccCcchHHHHHHhcc
Confidence 9977 345566666643
No 414
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.89 E-value=3.5e-24 Score=255.97 Aligned_cols=261 Identities=24% Similarity=0.395 Sum_probs=200.6
Q ss_pred ccccccCCCCceeEEEEEEccCCeEEEEEEeecc---cccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 668 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKG---VMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 668 ~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~---~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
.....+|.|++|.|+.+......+.++.|.+... ..........+..|..+-..+.|+|++..+..+.......-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 4557799999999999888777777777765421 1111222223666788888899999987777766665555559
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
|||++ +|+.++... ..++...+..++.||+.||+|||+.||.||||||+|++++.+|.+||+|||.+.......
T Consensus 401 E~~~~-Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~--- 474 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPW--- 474 (601)
T ss_pred hcccH-HHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCc---
Confidence 99999 999999875 458899999999999999999999999999999999999999999999999985532111
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCC-hhHHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTS-AVDWWALGILLYEMLYGYTPFRGKTRQKTF 903 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~-~sDIwSlG~il~eLltG~~Pf~~~~~~~~~ 903 (998)
.........++|+..|+|||++.+..|++ ..||||.|++++.|++|+.||......+..
T Consensus 475 --------------------e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~ 534 (601)
T KOG0590|consen 475 --------------------EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNS 534 (601)
T ss_pred --------------------chhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccc
Confidence 11123456778999999999999999987 799999999999999999999765443322
Q ss_pred -HHHHhC---CC---CCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCC
Q 001902 904 -ANILHK---DL---KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 958 (998)
Q Consensus 904 -~~i~~~---~~---~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 958 (998)
...... .. +......++.+.+.+|.+||+.||.+|.| +++|++.+||+.++
T Consensus 535 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~t----i~~i~~d~W~~~i~ 592 (601)
T KOG0590|consen 535 FKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRIT----IEQILNDEWIRSIE 592 (601)
T ss_pred hhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheec----HHHHhhChHhhhcc
Confidence 111110 00 11112335667889999999999999999 99999999999863
No 415
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=5.1e-22 Score=223.58 Aligned_cols=253 Identities=23% Similarity=0.222 Sum_probs=194.9
Q ss_pred CcccccccCCCCceeEEEEEEccCC-eEEEEEEeecccccChhHHHHHHHHHHHHHhCC----CCCccceeEEE-eeCCe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSG-QYFAMKAMDKGVMLNRNKVHRACAEREILDMLD----HPFVPALYASF-QTKTH 739 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~-~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~----h~nIv~l~~~~-~~~~~ 739 (998)
.|++.+.||+|+||.||+|.+..++ ..+|+|+......... ..+..|..++..+. ..++..+++.+ ....+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~---~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP---SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC---ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 8999999999999999999997764 6899998775422111 15666888888886 36999999999 57889
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecC-----CcEEEEeccCc
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-----GHVSLTDFDLS 814 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~-----g~vkL~DFG~a 814 (998)
.||||+.+ |.+|.++........++...+..++.|++.+|.+||+.|++||||||+|+++... ..+.|+|||++
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred eEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99999999 9999999877666779999999999999999999999999999999999999854 36999999999
Q ss_pred c--ccCCCCCCCCCcchhhhhcccCCCCcccccccccc-cccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCC
Q 001902 815 C--LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRA-SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGY 891 (998)
Q Consensus 815 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~ 891 (998)
+ ......... ..+.+. ...+.||..|.++.+..+...+.+.|+||++.++.+++.|.
T Consensus 175 r~~~~~~~~~~~--------------------~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~ 234 (322)
T KOG1164|consen 175 RRFKYVGDSGGN--------------------LRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGS 234 (322)
T ss_pred ccccccCCCCcc--------------------cccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCC
Confidence 7 321111100 001111 24567999999999999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHHh---CCCCCCCCCCCcHHHHHHHHHccccCccCcCCCh
Q 001902 892 TPFRGKTRQKTFANILH---KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH 942 (998)
Q Consensus 892 ~Pf~~~~~~~~~~~i~~---~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~ 942 (998)
.||.+.........+.. ...........+.++.+++..+-..+...+|...
T Consensus 235 LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~ 288 (322)
T KOG1164|consen 235 LPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYE 288 (322)
T ss_pred CCCccccccchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHH
Confidence 99977654333332222 1111111222346777888877778999999944
No 416
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.89 E-value=2.3e-21 Score=215.60 Aligned_cols=263 Identities=36% Similarity=0.558 Sum_probs=208.0
Q ss_pred cccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCC-CccceeEEEeeCCeEEEEEe
Q 001902 667 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHP-FVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 667 y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~-nIv~l~~~~~~~~~~~lV~E 745 (998)
|.+.+.||.|+||.||++.+. ..+++|.+.............+.+|+.+++.+.|+ +|+++++.+......+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 778899999999999999986 78999999876554444567888999999999988 79999999988778899999
Q ss_pred cCCCCchhHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCC-cEEEEeccCccccCCCCCC
Q 001902 746 YCPGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g-~vkL~DFG~a~~~~~~~~~ 823 (998)
|+.++++.+++..... ..++......++.|++.++.|+|..+++|||+||+||+++..+ .++++|||.+.........
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 9999999977765421 2689999999999999999999999999999999999999988 7999999998643211100
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC---CCCCChhHHHHHHHHHHHHHcCCCCCCCCCh-
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTPFRGKTR- 899 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~---~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~- 899 (998)
. ..........|+..|++||.+.+ ..+....|+||+|++++++++|..||.....
T Consensus 159 ~---------------------~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~ 217 (384)
T COG0515 159 S---------------------SIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS 217 (384)
T ss_pred c---------------------cccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc
Confidence 0 00012356789999999999988 5788899999999999999999999887763
Q ss_pred ---HHHHHHHHhCCCC-CCCCCCCc------HHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 900 ---QKTFANILHKDLK-FPSSTPTS------LHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 900 ---~~~~~~i~~~~~~-~~~~~~~s------~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
......+.....+ ........ ..+.+++.+|+..+|..|.+ ......++|....
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~----~~~~~~~~~~~~~ 281 (384)
T COG0515 218 SATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLS----SSSDLSHDLLAHL 281 (384)
T ss_pred ccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCC----HHHHhhchHhhCc
Confidence 3444444443322 22222111 46889999999999999999 6666666555543
No 417
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=1.1e-22 Score=228.70 Aligned_cols=178 Identities=20% Similarity=0.163 Sum_probs=132.7
Q ss_pred cccccCCcccccccCCCCceeEEEEEEcc-CCeEEEEEEeecccc--cChhHHHHHHHHHHHHHhCCCCCccceeEEEee
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVELCG-SGQYFAMKAMDKGVM--LNRNKVHRACAEREILDMLDHPFVPALYASFQT 736 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~-~~~~valK~i~~~~~--~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~ 736 (998)
.....++|.+.+.||+|+||+||+|.+.. +++.+|+|++..... ........+.+|+++|++++|+|++..+..
T Consensus 13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~--- 89 (365)
T PRK09188 13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA--- 89 (365)
T ss_pred cccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---
Confidence 34456789999999999999999999876 688889998753321 123345678899999999999999853322
Q ss_pred CCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC-CCCcEEEecCCcEEEEeccCcc
Q 001902 737 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL-KPENVLLQGNGHVSLTDFDLSC 815 (998)
Q Consensus 737 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDL-kP~NILi~~~g~vkL~DFG~a~ 815 (998)
.+..|||||||+|++|... .. .. ...++.|++++|.|||++||+|||| ||+|||++.++.+||+|||+|.
T Consensus 90 ~~~~~LVmE~~~G~~L~~~-~~-----~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~ 160 (365)
T PRK09188 90 TGKDGLVRGWTEGVPLHLA-RP-----HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLAS 160 (365)
T ss_pred cCCcEEEEEccCCCCHHHh-Cc-----cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccce
Confidence 2457999999999999732 11 11 1467889999999999999999999 9999999999999999999997
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC
Q 001902 816 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG 868 (998)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~ 868 (998)
........ .. ......-....+++.|+|||++..
T Consensus 161 ~~~~~~~~----------------~~---~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 161 VFRRRGAL----------------YR---IAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred ecccCcch----------------hh---hhhhhhhhhhhccCccCCcccCCh
Confidence 65311100 00 000011135678999999999854
No 418
>PRK11359 cyclic-di-GMP phosphodiesterase; Provisional
Probab=99.84 E-value=1.2e-19 Score=230.27 Aligned_cols=236 Identities=19% Similarity=0.311 Sum_probs=192.2
Q ss_pred chHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCC----
Q 001902 186 RVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ---- 261 (998)
Q Consensus 186 ~~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~---- 261 (998)
..+..+..+++.++++++++|. +|+|+++|++|++++||+.+|++|+++..+.+++........+......+.
T Consensus 9 ~~~~~~~~~le~~~~~i~~~d~---~g~i~~~N~~~~~l~G~s~eeliG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (799)
T PRK11359 9 AADGIFFPALEQNMMGAVLINE---NDEVLFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVE 85 (799)
T ss_pred hhhhhHHHHHHhhcCcEEEEcC---CCeEEEEcHHHHHHhCCCHHHHcCCCHHHhcCccccccchHHHhhhhccCCcccc
Confidence 4556778899999999999998 777999999999999999999999998888777665544444544444433
Q ss_pred cEEEEEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHHHhhcCCCCCchhhhhHHHHHHHHhHhhHHH
Q 001902 262 SYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTE 341 (998)
Q Consensus 262 ~~~~e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~~l~~~~~~L~~~l~~~d~~~~~~~~~~~~~ 341 (998)
.+..+++.+++||..+|+.++..++. .+|. .+++++.+|||++++.+++++.
T Consensus 86 ~~~~e~~~~~~dG~~~~v~~~~~~~~-~~g~-~~~~~~~~DiT~~~~~~~~~~~-------------------------- 137 (799)
T PRK11359 86 GMSRELQLEKKDGSKIWTRFALSKVS-AEGK-VYYLALVRDASVEMAQKEQTRQ-------------------------- 137 (799)
T ss_pred ccceeeEEecCCcCEEEEEEEeeeec-cCCc-eEEEEEEeeccchhhhHHHHHH--------------------------
Confidence 24458888999999999999998873 4454 5678999999987765544211
Q ss_pred HHHHccCCCCccccCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCCCCCCcccccccccccchhhccccCCcccc
Q 001902 342 LVQAMKKPRSLSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQKSGRRSFM 421 (998)
Q Consensus 342 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (998)
T Consensus 138 -------------------------------------------------------------------------------- 137 (799)
T PRK11359 138 -------------------------------------------------------------------------------- 137 (799)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccCCCCCCCccccccccCCCCCCCCCCCCCchhhHHHHHhhhccccHHHHHhhcCceEEEEcCCCCCCCEEEcC
Q 001902 422 GLIGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFAS 501 (998)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~er~~~e~e~r~~~~l~~i~e~~~d~i~i~D~~G~d~~I~~vN 501 (998)
+..++++++++++++|.+|. ++++|
T Consensus 138 ----------------------------------------------------~~~~~~~~~~~i~~~d~~g~---i~~~N 162 (799)
T PRK11359 138 ----------------------------------------------------LIIAVDHLDRPVIVLDPERR---IVQCN 162 (799)
T ss_pred ----------------------------------------------------HHHHHhcCCCcEEEEcCCCc---EEEEC
Confidence 35578999999999999777 99999
Q ss_pred HHHHHHcCCChhhhcCCCCcccc-CCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCcEEEEEEEEeeeccCC----EEE
Q 001902 502 DSFLELTEYSREEILGRNCRFLQ-GPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQK----YFI 576 (998)
Q Consensus 502 ~a~~~l~Gy~~eEliG~~~~~l~-~p~~~~~~~~~i~~~l~~g~~~~~e~~~~rkdG~~~wv~~~~spi~d~~----~~v 576 (998)
+++++++||+.+|++|++...+. ++.........+...+..+..+..+.+..++||..+|+.++..|+.+.+ +++
T Consensus 163 ~~~~~l~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~v~d~~g~~~~~~ 242 (799)
T PRK11359 163 RAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV 242 (799)
T ss_pred hhhHhhhCCCHHHHCCCChHHhcCCCCCcHHHHHHHHHhhccCCCCcceeEEeCCCCCEEEEEeeeeeeecCCCceeEEE
Confidence 99999999999999999876554 4555555666677777777778888999999999999999999998765 789
Q ss_pred EEEecCCcccc
Q 001902 577 GVQLDGSEHLE 587 (998)
Q Consensus 577 gi~rDITerk~ 587 (998)
++++|||+||+
T Consensus 243 ~~~~DITerk~ 253 (799)
T PRK11359 243 MTFSDITEERQ 253 (799)
T ss_pred EEeehhhhHHH
Confidence 99999999986
No 419
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.84 E-value=7.7e-21 Score=199.04 Aligned_cols=176 Identities=16% Similarity=0.146 Sum_probs=136.5
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHH------HHHHHHHHHhCCCCCccceeEEE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHR------ACAEREILDMLDHPFVPALYASF 734 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~------~~~E~~il~~l~h~nIv~l~~~~ 734 (998)
.+..++|++++.||.|+||.||++.+ ++..+|+|++............. +.+|+..+.++.|++|..+..++
T Consensus 27 ~~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~ 104 (232)
T PRK10359 27 DFLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFY 104 (232)
T ss_pred HHhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEee
Confidence 34468999999999999999999765 46689999998765444444333 57899999999999999999886
Q ss_pred eeC--------CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcE
Q 001902 735 QTK--------THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHV 806 (998)
Q Consensus 735 ~~~--------~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~v 806 (998)
... +..+|||||++|.+|.++.. +++ ....+++.+|..||..|++|||+||+||+++.+| +
T Consensus 105 ~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i 173 (232)
T PRK10359 105 LLAERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-L 173 (232)
T ss_pred eecccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-E
Confidence 533 35789999999999988732 333 2456999999999999999999999999999988 9
Q ss_pred EEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHH
Q 001902 807 SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYE 886 (998)
Q Consensus 807 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~e 886 (998)
+|+|||.+........ ..-++....+..++|+||||+++..
T Consensus 174 ~liDfg~~~~~~e~~a---------------------------------------~d~~vler~y~~~~di~~lg~~~~~ 214 (232)
T PRK10359 174 RIIDLSGKRCTAQRKA---------------------------------------KDRIDLERHYGIKNEIKDLGYYLLI 214 (232)
T ss_pred EEEECCCcccccchhh---------------------------------------HHHHHHHhHhcccccccceeEeehH
Confidence 9999998743210000 0013344456678999999999887
Q ss_pred HH
Q 001902 887 ML 888 (998)
Q Consensus 887 Ll 888 (998)
+.
T Consensus 215 ~~ 216 (232)
T PRK10359 215 YK 216 (232)
T ss_pred HH
Confidence 65
No 420
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.83 E-value=2.1e-20 Score=193.44 Aligned_cols=141 Identities=16% Similarity=0.170 Sum_probs=110.7
Q ss_pred ccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhH-----------------------HHHHHHHHHHHHhCCCCC
Q 001902 670 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK-----------------------VHRACAEREILDMLDHPF 726 (998)
Q Consensus 670 ~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~-----------------------~~~~~~E~~il~~l~h~n 726 (998)
...||+|+||.||+|.+. +|+.||+|+++......... ......|+.++..+.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 467999999999999996 89999999998653211110 112345999999998888
Q ss_pred ccceeEEEeeCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHH-HHCCceeccCCCCcEEEecCCc
Q 001902 727 VPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYL-HCQGIIYRDLKPENVLLQGNGH 805 (998)
Q Consensus 727 Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~L-H~~~IiHrDLkP~NILi~~~g~ 805 (998)
+.....+.... .+|||||++|+++...+... ..++...+..++.|++.+|.+| |+.||+||||||+|||++ ++.
T Consensus 81 v~~p~~~~~~~--~~iVmE~i~g~~l~~~~~~~--~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~ 155 (190)
T cd05147 81 IPCPEPILLKS--HVLVMEFIGDDGWAAPRLKD--APLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGK 155 (190)
T ss_pred CCCCcEEEecC--CEEEEEEeCCCCCcchhhhc--CCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCc
Confidence 75544433322 38999999888776553332 4588999999999999999999 699999999999999999 578
Q ss_pred EEEEeccCccc
Q 001902 806 VSLTDFDLSCL 816 (998)
Q Consensus 806 vkL~DFG~a~~ 816 (998)
++|+|||+|..
T Consensus 156 v~LiDFG~a~~ 166 (190)
T cd05147 156 LYIIDVSQSVE 166 (190)
T ss_pred EEEEEcccccc
Confidence 99999999854
No 421
>TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL. NifL is a modulator of the nitrogen fixation positive regulator protein NifA, and is therefore a negative regulator. It binds NifA. NifA and NifL are encoded by adjacent genes.
Probab=99.83 E-value=2.7e-20 Score=221.81 Aligned_cols=238 Identities=20% Similarity=0.315 Sum_probs=186.8
Q ss_pred HHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEEEE
Q 001902 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRL 267 (998)
Q Consensus 188 ~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~ 267 (998)
.+.|+.+++.++++++++|. +|+++|+|+++++++||+.++++|++...+.++.........+...+..+..+..++
T Consensus 3 ~~~~~~i~~~~~~~i~~~d~---~g~~~~~N~~~~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (494)
T TIGR02938 3 PEAYRQTVDQAPLAISITDL---KANILYANDAFTRITGYTKEEIIGKNESVLSNHTTPPEVYQALWGSLAEQKPWAGKL 79 (494)
T ss_pred hHHHHHHHHhCCceEEEECC---CCcEEEEchhheeecCCCHHHHhCCCchhhcCCCCCHHHHHHHHHHHHhCCccccee
Confidence 46899999999999999999 777999999999999999999999987767666666667777788888888888888
Q ss_pred EEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHHHhhcCCCCCchhhhhHHHHHHHHhHhhHHHHHHHcc
Q 001902 268 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMK 347 (998)
Q Consensus 268 ~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~~l~~~~~~L~~~l~~~d~~~~~~~~~~~~~~~~~l~ 347 (998)
..++++|..+|+..++.|+.+.+|.+.+++++++|||++|+++++++..
T Consensus 80 ~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DIt~~k~~e~~l~~~------------------------------- 128 (494)
T TIGR02938 80 LNRRKDGELYLAELTVAPVLNEAGETTHFLGMHRDITELHRLEQVVANQ------------------------------- 128 (494)
T ss_pred eccCCCccchhhheeeEEEECCCCCEEEEEEehhhhhHHHHHHHHHHHH-------------------------------
Confidence 8899999999999999999999999999999999999999988774321
Q ss_pred CCCCccccCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCCCCCCcccccccccccchhhccccCCcccccccccc
Q 001902 348 KPRSLSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQKSGRRSFMGLIGRK 427 (998)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (998)
T Consensus 129 -------------------------------------------------------------------------------- 128 (494)
T TIGR02938 129 -------------------------------------------------------------------------------- 128 (494)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCCCccccccccCCCCCCCCCCCCCchhhHHHHHhhhccccHHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHH
Q 001902 428 SQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLEL 507 (998)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~er~~~e~e~r~~~~l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l 507 (998)
+.+ |+.++++++++|+++|.+|. ++++|++|+++
T Consensus 129 ---------------------------------------~~~----~~~~~~~~~~~i~~~d~~~~---i~~~N~~~~~~ 162 (494)
T TIGR02938 129 ---------------------------------------KLL----IESVVDAAPVAFVLLDPTGR---VILDNQEYKKL 162 (494)
T ss_pred ---------------------------------------HHH----HHHHHhcccceEEEEcCCCC---EEEechhHHHh
Confidence 111 67899999999999999777 99999999999
Q ss_pred cCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcE-EEEEEEEecCCc-EEEEEEEEeeeccCC------------
Q 001902 508 TEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDV-TVQLINYTKSGK-KFWNLFHLQPMRDQK------------ 573 (998)
Q Consensus 508 ~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~-~~e~~~~rkdG~-~~wv~~~~spi~d~~------------ 573 (998)
+|+...+..+.....+.+++.... +......+..+ ..+....+++|. .+|+.....++.+..
T Consensus 163 ~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (494)
T TIGR02938 163 ATDLRVKEPAHTVLDLLREAWREA----LAENWPQQLAFSNREARFDRGGGRPARWLSCTGSVIGMESDCADSFFCAAEQ 238 (494)
T ss_pred hchhhhhHHHHHHHHHhhHHhhhh----hhhcchhhhccccceeeeccCCCceeeEEEecCceEEeecchhhheeccCCC
Confidence 999998888766444444432222 11111112222 233444555555 789988887776543
Q ss_pred -EEEEEEecCCcccccc
Q 001902 574 -YFIGVQLDGSEHLEPL 589 (998)
Q Consensus 574 -~~vgi~rDITerk~~~ 589 (998)
+++++++|||++|+.+
T Consensus 239 ~~~~~~~~DITe~k~~e 255 (494)
T TIGR02938 239 PYLLLTIADISNLREEQ 255 (494)
T ss_pred chheehHHHHHHHHHHH
Confidence 4567889999999744
No 422
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.82 E-value=2e-20 Score=201.69 Aligned_cols=236 Identities=23% Similarity=0.284 Sum_probs=152.5
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC----------CCCccceeEEEe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD----------HPFVPALYASFQ 735 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~----------h~nIv~l~~~~~ 735 (998)
.+...+.||.|+++.||.|.+..||+.+|+|++...........+.+.+|.-....+. |-.++..++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 3566788999999999999999999999999987654334445666666654443322 223333333332
Q ss_pred ---------eC---C-----eEEEEEecCCCCchhHHHhh----CCC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q 001902 736 ---------TK---T-----HVCLITDYCPGGELFLLLDR----QPT-KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL 793 (998)
Q Consensus 736 ---------~~---~-----~~~lV~E~~~ggsL~~~l~~----~~~-~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDL 793 (998)
.. . ..+++|+-+ .++|.+++.- ... ..+.......+..|+++.+++||+.|++|+||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi 171 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI 171 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence 11 1 236788888 7788877542 111 12333344556689999999999999999999
Q ss_pred CCCcEEEecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-----
Q 001902 794 KPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG----- 868 (998)
Q Consensus 794 kP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~----- 868 (998)
+|+||+++.+|.++|+||+.....+.. ......+..|.+||....
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~------------------------------~~~~~~~~~~~PPe~~~~~~~~~ 221 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGTR------------------------------YRCSEFPVAFTPPELESCAGQFG 221 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTEE------------------------------EEGGGS-TTTS-HHHHHHHTSCH
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCce------------------------------eeccCCCcccCChhhhhhhcccC
Confidence 999999999999999999876432200 000234578999998744
Q ss_pred ---CCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCc
Q 001902 869 ---AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSR 938 (998)
Q Consensus 869 ---~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~R 938 (998)
..++.+.|.|+||+++|.|+||..||........... .+......+..++.||..||++||.+|
T Consensus 222 ~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~------~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 222 QNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW------DFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred cccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence 2467899999999999999999999986543221111 222333567789999999999999988
No 423
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.82 E-value=2.4e-21 Score=229.22 Aligned_cols=273 Identities=21% Similarity=0.266 Sum_probs=192.1
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeeccc-ccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-MLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~-~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
.|...+.||++.|=+|.+|++.+ | .+++|++-+.. ...-....+...|++ ...+++||++.+.-+...+...|||-
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~e-G-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvR 100 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDRE-G-LVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVR 100 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCC-c-eEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHH
Confidence 68888999999999999999843 4 49999987653 333344555555666 67779999999988888888899999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
+|+ ..+|+|.+..++ .+...+.+-|+.||+.||..+|..||+|||||.+||||++.+-+.|.||..-+.. +
T Consensus 101 qyv-khnLyDRlSTRP--FL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPt------Y 171 (1431)
T KOG1240|consen 101 QYV-KHNLYDRLSTRP--FLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPT------Y 171 (1431)
T ss_pred HHH-hhhhhhhhccch--HHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCc------c
Confidence 999 789999998764 4888889999999999999999999999999999999999999999999865432 1
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCC-----------CCChhHHHHHHHHHHHHHc-CCC
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-----------HTSAVDWWALGILLYEMLY-GYT 892 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-----------~~~~sDIwSlG~il~eLlt-G~~ 892 (998)
+|.. +|..+..- ..+-..-.+|.|||.+.... .+++-||||+||++.||++ |++
T Consensus 172 LPeD-----------NPadf~fF---FDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~P 237 (1431)
T KOG1240|consen 172 LPED-----------NPADFTFF---FDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRP 237 (1431)
T ss_pred CCCC-----------CcccceEE---EecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCC
Confidence 1111 11101000 01112345899999985421 5678999999999999997 899
Q ss_pred CCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC-------CCccCCChhhhhcC
Q 001902 893 PFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH-------PFFKGVNWALVRCM 965 (998)
Q Consensus 893 Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H-------p~f~~~~~~~~~~~ 965 (998)
||.-. +...|+..-.......-....+..+++||..|++.||++|++ |++.|+- .||-.+=+.-+.+.
T Consensus 238 lF~LS-QL~aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlS----AedyL~~yrG~~FP~yFy~FL~~Y~~~~ 312 (1431)
T KOG1240|consen 238 LFTLS-QLLAYRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLS----AEDYLQKYRGLVFPEYFYSFLYDYLDRF 312 (1431)
T ss_pred cccHH-HHHhHhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccC----HHHHHHhhhccccHHHHHHHHHHHHHhc
Confidence 98421 001111000000000000011335789999999999999999 8888876 23333333444555
Q ss_pred CCCC
Q 001902 966 NPPE 969 (998)
Q Consensus 966 ~~~~ 969 (998)
.|+.
T Consensus 313 ~~~~ 316 (1431)
T KOG1240|consen 313 VPLT 316 (1431)
T ss_pred CCcc
Confidence 5555
No 424
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.82 E-value=1.9e-20 Score=190.75 Aligned_cols=247 Identities=19% Similarity=0.282 Sum_probs=201.0
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
.+...+..++.+|.+...|..|++++. |..++.|++...... ......+..|.-.|+-+.||||+.+++.+....++
T Consensus 186 gid~~~lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t-~risrdfneefp~lrifshpnilpvlgacnsppnl 262 (448)
T KOG0195|consen 186 GIDVSSLNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVT-ARISRDFNEEFPALRIFSHPNILPVLGACNSPPNL 262 (448)
T ss_pred CcchhhhhhhhhhccCCCccccccccc--Ccchhhhhhhhhhcc-hhhcchhhhhCcceeeecCCchhhhhhhccCCCCc
Confidence 355667788899999999999999995 456778877654332 22345677788888889999999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCcEEEecCCcEEEE--eccCccc
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSLT--DFDLSCL 816 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~--IiHrDLkP~NILi~~~g~vkL~--DFG~a~~ 816 (998)
.++..||+-|+|+.+++.+........++.+++.+|++|++|||+.. |.---|....++||++.+.+|. |--++..
T Consensus 263 v~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfq 342 (448)
T KOG0195|consen 263 VIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQ 342 (448)
T ss_pred eEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeee
Confidence 99999999999999999987778888999999999999999999974 4445688889999998876653 4333311
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCC---ChhHHHHHHHHHHHHHcCCCC
Q 001902 817 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHT---SAVDWWALGILLYEMLYGYTP 893 (998)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~---~~sDIwSlG~il~eLltG~~P 893 (998)
. ....-.|.||+||.+...+-+ .++|+|||++++|||.|...|
T Consensus 343 e----------------------------------~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevp 388 (448)
T KOG0195|consen 343 E----------------------------------VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVP 388 (448)
T ss_pred c----------------------------------cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccc
Confidence 1 011346889999999887654 389999999999999999999
Q ss_pred CCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhc
Q 001902 894 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 944 (998)
Q Consensus 894 f~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 944 (998)
|..-.+.+.-.+|.-..+.....+..+..+..|+.-|+..||.+||.+..+
T Consensus 389 fadlspmecgmkialeglrv~ippgis~hm~klm~icmnedpgkrpkfdmi 439 (448)
T KOG0195|consen 389 FADLSPMECGMKIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMI 439 (448)
T ss_pred cccCCchhhhhhhhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCccee
Confidence 999998888888877666666667789999999999999999999996543
No 425
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.80 E-value=4.1e-19 Score=184.36 Aligned_cols=141 Identities=18% Similarity=0.167 Sum_probs=112.1
Q ss_pred ccccCCCCceeEEEEEEccCCeEEEEEEeecccccChh-----------------------HHHHHHHHHHHHHhCCCCC
Q 001902 670 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN-----------------------KVHRACAEREILDMLDHPF 726 (998)
Q Consensus 670 ~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~-----------------------~~~~~~~E~~il~~l~h~n 726 (998)
.+.||+|++|.||+|.+. +|+.||+|++......... .......|...+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 578999999999999986 8999999999875321000 0122357899999999998
Q ss_pred ccceeEEEeeCCeEEEEEecCCCCchhHH-HhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCcEEEecCC
Q 001902 727 VPALYASFQTKTHVCLITDYCPGGELFLL-LDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNG 804 (998)
Q Consensus 727 Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~-l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~~IiHrDLkP~NILi~~~g 804 (998)
|.....+.... .||||||++|+++... +.. ..++...+..++.|++.+|.+||+ +||+||||||+|||++ ++
T Consensus 81 i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~---~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~ 154 (190)
T cd05145 81 VPVPEPILLKK--NVLVMEFIGDDGSPAPRLKD---VPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DG 154 (190)
T ss_pred CCCceEEEecC--CEEEEEEecCCCchhhhhhh---ccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CC
Confidence 86555544333 4899999988765433 332 347888999999999999999999 9999999999999999 89
Q ss_pred cEEEEeccCcccc
Q 001902 805 HVSLTDFDLSCLT 817 (998)
Q Consensus 805 ~vkL~DFG~a~~~ 817 (998)
.++|+|||++...
T Consensus 155 ~~~liDFG~a~~~ 167 (190)
T cd05145 155 KPYIIDVSQAVEL 167 (190)
T ss_pred CEEEEEcccceec
Confidence 9999999999654
No 426
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.78 E-value=2.5e-18 Score=176.30 Aligned_cols=203 Identities=20% Similarity=0.191 Sum_probs=141.9
Q ss_pred cccccccCCCCceeEEEEEEccCCeEEEEEEeecccccCh-hHHHHHHHHHHHHHhCC-CCCccceeEEEeeCCeEEEEE
Q 001902 667 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR-NKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 667 y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~-~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lV~ 744 (998)
+.+...|++|+||+||++.. .+.+++.+.+........ -....+.+|+++|++|. |++|++++++ +..|++|
T Consensus 4 ~~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvm 77 (218)
T PRK12274 4 PAVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDR 77 (218)
T ss_pred cccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEE
Confidence 44568899999999998775 677888777665432211 11235778999999995 5889999886 4469999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC-CCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL-KPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDL-kP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
||+.|.+|...+.. . ...++.|++.+|.+||++||+|||| ||+|||++.+|.++|+|||+|.........
T Consensus 78 eyI~G~~L~~~~~~--------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~ 148 (218)
T PRK12274 78 SYLAGAAMYQRPPR--------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARW 148 (218)
T ss_pred eeecCccHHhhhhh--------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchH
Confidence 99999998754321 1 1346789999999999999999999 799999999999999999999643211100
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCC-ChhHHHHHHHHHHHHHcCCCCCCCCC
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHT-SAVDWWALGILLYEMLYGYTPFRGKT 898 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~-~~sDIwSlG~il~eLltG~~Pf~~~~ 898 (998)
. ..- .+++. ... ...-...++.|++|+....- ..+ ...+.++.|+-+|.++|+..|+.+.+
T Consensus 149 ~--r~L--~~rDl---------~~l-lk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 149 M--RLL--AREDL---------RHL-LKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred H--HHH--HHHHH---------HHH-HHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 0 000 00000 000 00012367888888754322 233 57788999999999999999987654
No 427
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.78 E-value=4.6e-19 Score=189.59 Aligned_cols=208 Identities=24% Similarity=0.332 Sum_probs=148.2
Q ss_pred CCCCccceeEEEeeC---------------------------CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHH
Q 001902 723 DHPFVPALYASFQTK---------------------------THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAE 775 (998)
Q Consensus 723 ~h~nIv~l~~~~~~~---------------------------~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~q 775 (998)
+|||||.++.+|.+. ..+|+||... ..+|..++-.+. .+....+.++.|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY-~~tLr~yl~~~~---~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRY-RQTLREYLWTRH---RSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcc-hhhHHHHHhcCC---CchHHHHHHHHH
Confidence 599999999887432 2589999999 789999997643 677788889999
Q ss_pred HHHHHHHHHHCCceeccCCCCcEEEe--cCC--cEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCccccccccccc
Q 001902 776 VVVALEYLHCQGIIYRDLKPENVLLQ--GNG--HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRAS 851 (998)
Q Consensus 776 il~aL~~LH~~~IiHrDLkP~NILi~--~~g--~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 851 (998)
+++|+.|||++||.|||||.+|||+. .++ .+.|.|||++.... ......|. ....
T Consensus 350 lLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~-~hGlqlpy--------------------~S~~ 408 (598)
T KOG4158|consen 350 LLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADD-NHGLQLPY--------------------ESDE 408 (598)
T ss_pred HHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeecc-cccccccc--------------------cccc
Confidence 99999999999999999999999996 333 58899999874321 11111110 0011
Q ss_pred ccccCCCCcccchhhcCCCC------CChhHHHHHHHHHHHHHcCCCCCCCCChHHHHH-HHHhCCCCCCCCCCCcHHHH
Q 001902 852 NSFVGTEEYIAPEIIAGAGH------TSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA-NILHKDLKFPSSTPTSLHAK 924 (998)
Q Consensus 852 ~~~~gt~~y~aPE~l~~~~~------~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~-~i~~~~~~~~~~~~~s~~l~ 924 (998)
-..-|...-||||+....+- ..++|.|+.|.+.||+++...||.+......-. ...+..+ .+-...+++.++
T Consensus 409 Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qL-Palp~~vpp~~r 487 (598)
T KOG4158|consen 409 VDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQL-PALPSRVPPVAR 487 (598)
T ss_pred ccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhC-CCCcccCChHHH
Confidence 23357888999999865431 238999999999999999999998844321111 1112222 122345788999
Q ss_pred HHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 925 QLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 925 ~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
+++..+|+.||++|++.. ++..+|+-.-|..-
T Consensus 488 qlV~~lL~r~pskRvsp~-iAANvl~LsLw~~~ 519 (598)
T KOG4158|consen 488 QLVFDLLKRDPSKRVSPN-IAANVLNLSLWRMG 519 (598)
T ss_pred HHHHHHhcCCccccCCcc-HHHhHHHHHHhcCc
Confidence 999999999999999944 45556554444433
No 428
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.76 E-value=1.9e-18 Score=210.11 Aligned_cols=197 Identities=24% Similarity=0.354 Sum_probs=160.5
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC---CCCccceeEEEeeC
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD---HPFVPALYASFQTK 737 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~---h~nIv~l~~~~~~~ 737 (998)
++....|.|-+.||+|+||+||+|.+.. |+.+|||+-+.........+.+ ++.+|+ -+.|..+...+...
T Consensus 694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~~q------~~~RLk~~~~~~~~~~~~a~~~~ 766 (974)
T KOG1166|consen 694 EVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYICLQ------VMERLKPQMLPSIMHISSAHVFQ 766 (974)
T ss_pred eecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeehHH------HHHhhchhhhcchHHHHHHHccC
Confidence 4556789999999999999999999965 9999999887765544444443 344444 23455556666677
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec-------CCcEEEEe
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-------NGHVSLTD 810 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~-------~g~vkL~D 810 (998)
+..+||+||.+.|||.+++.. .+.+++..+..++.|++..|+.||..+|||+||||+|+||.. +--++|+|
T Consensus 767 ~~S~lv~ey~~~Gtlld~~N~--~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lID 844 (974)
T KOG1166|consen 767 NASVLVSEYSPYGTLLDLINT--NKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLID 844 (974)
T ss_pred CcceeeeeccccccHHHhhcc--CCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEe
Confidence 788999999999999999974 466999999999999999999999999999999999999962 33589999
Q ss_pred ccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcC
Q 001902 811 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYG 890 (998)
Q Consensus 811 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG 890 (998)
||.|..+.-- .+.......++|-.|-.+|+..|.++++..|.|.|+.+++-|+.|
T Consensus 845 fG~siDm~lf-------------------------p~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG 899 (974)
T KOG1166|consen 845 FGRSIDMKLF-------------------------PDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFG 899 (974)
T ss_pred cccceeeeEc-------------------------CCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHH
Confidence 9998654311 111234567899999999999999999999999999999999988
Q ss_pred C
Q 001902 891 Y 891 (998)
Q Consensus 891 ~ 891 (998)
+
T Consensus 900 ~ 900 (974)
T KOG1166|consen 900 K 900 (974)
T ss_pred H
Confidence 5
No 429
>PRK10345 hypothetical protein; Provisional
Probab=99.75 E-value=1e-17 Score=175.09 Aligned_cols=135 Identities=22% Similarity=0.226 Sum_probs=106.9
Q ss_pred cccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-----CCCCccceeEEEeeCC---eE
Q 001902 669 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-----DHPFVPALYASFQTKT---HV 740 (998)
Q Consensus 669 ~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-----~h~nIv~l~~~~~~~~---~~ 740 (998)
-...||+|+||.||. +..++.. +||++.... ......+.+|+.+++.+ +||||+++++++.++. .+
T Consensus 6 ~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~---~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v 79 (210)
T PRK10345 6 EQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRG---DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYV 79 (210)
T ss_pred CcceecCCCceEEEE--CCCCcCe-EEEEEeccc---cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEE
Confidence 346799999999995 7667666 699886532 22346788999999999 6799999999998874 43
Q ss_pred E-EEEec--CCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHH-HHHHHCCceeccCCCCcEEEec----CCcEEEEecc
Q 001902 741 C-LITDY--CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVAL-EYLHCQGIIYRDLKPENVLLQG----NGHVSLTDFD 812 (998)
Q Consensus 741 ~-lV~E~--~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL-~~LH~~~IiHrDLkP~NILi~~----~g~vkL~DFG 812 (998)
+ +|||| +.+++|.+++.+. .+++. ..++.|++.++ +|||+++|+||||||+|||++. ++.++|+||+
T Consensus 80 ~~~I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~ 154 (210)
T PRK10345 80 YDVIADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNI 154 (210)
T ss_pred EEEEecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence 4 78999 5579999999663 25555 35678888888 9999999999999999999984 3479999954
Q ss_pred Cc
Q 001902 813 LS 814 (998)
Q Consensus 813 ~a 814 (998)
.+
T Consensus 155 G~ 156 (210)
T PRK10345 155 GE 156 (210)
T ss_pred CC
Confidence 44
No 430
>smart00090 RIO RIO-like kinase.
Probab=99.72 E-value=3.3e-17 Score=175.48 Aligned_cols=144 Identities=20% Similarity=0.154 Sum_probs=113.0
Q ss_pred CcccccccCCCCceeEEEEE-EccCCeEEEEEEeecccccC-------------------hh--HHHHHHHHHHHHHhCC
Q 001902 666 HFRPIKPLGSGDTGSVHLVE-LCGSGQYFAMKAMDKGVMLN-------------------RN--KVHRACAEREILDMLD 723 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~-~~~~~~~valK~i~~~~~~~-------------------~~--~~~~~~~E~~il~~l~ 723 (998)
.|.+.+.||.|+||.||+|. +..+|+.||+|++....... .. ....+..|+.++.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 48899999999999999999 66789999999997542110 00 1123567999999997
Q ss_pred CC--CccceeEEEeeCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCCCcEEE
Q 001902 724 HP--FVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG-IIYRDLKPENVLL 800 (998)
Q Consensus 724 h~--nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~-IiHrDLkP~NILi 800 (998)
+. .+++++.+ . ..+|||||++|.+|....... ..+....+..++.||+.+|.+||+.| |+||||||+||++
T Consensus 109 ~~~i~~p~~~~~---~-~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli 182 (237)
T smart00090 109 EAGVPVPKPIAW---R-RNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILV 182 (237)
T ss_pred hcCCCCCeeeEe---c-CceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEE
Confidence 53 34444432 2 348999999998887655332 33666677899999999999999999 9999999999999
Q ss_pred ecCCcEEEEeccCccc
Q 001902 801 QGNGHVSLTDFDLSCL 816 (998)
Q Consensus 801 ~~~g~vkL~DFG~a~~ 816 (998)
+ ++.++|+|||.+..
T Consensus 183 ~-~~~i~LiDFg~a~~ 197 (237)
T smart00090 183 H-DGKVVIIDVSQSVE 197 (237)
T ss_pred E-CCCEEEEEChhhhc
Confidence 9 88999999999854
No 431
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.72 E-value=4e-18 Score=190.77 Aligned_cols=185 Identities=26% Similarity=0.368 Sum_probs=138.4
Q ss_pred CeEEEEEecCCCCchhHHHhh-CCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccc
Q 001902 738 THVCLITDYCPGGELFLLLDR-QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 816 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~-~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~ 816 (998)
.++||.|++|.-.+|.+++.+ ......+......++.|++.|++| +|.+|+|+||.||++..+..+||+|||+...
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts 405 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTS 405 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheee
Confidence 468999999999999999974 344557788899999999999999 9999999999999999999999999999855
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCC
Q 001902 817 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFR 895 (998)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~ 895 (998)
+..... .....-.++..+||..||+||.+.+..|+.++||||||++|+||++ -..+|.
T Consensus 406 ~~~~~~---------------------~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e 464 (516)
T KOG1033|consen 406 QDKDET---------------------VAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE 464 (516)
T ss_pred cccCCc---------------------ccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH
Confidence 432221 0111223455689999999999999999999999999999999996 222221
Q ss_pred CCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 896 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 896 ~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
....+..+-.+.++. ......+.-..|+..||...|.+||+ +.+.--|+|.
T Consensus 465 ---r~~t~~d~r~g~ip~-~~~~d~p~e~~ll~~lls~~p~~RP~----~~~~~~~~~~ 515 (516)
T KOG1033|consen 465 ---RIATLTDIRDGIIPP-EFLQDYPEEYTLLQQLLSPSPEERPS----AIEVALHEFL 515 (516)
T ss_pred ---HHHhhhhhhcCCCCh-HHhhcCcHHHHHHHHhcCCCcccCch----HHHHhhhhhc
Confidence 122233333333331 22222334468999999999999997 5555556654
No 432
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.69 E-value=2.6e-16 Score=166.15 Aligned_cols=138 Identities=21% Similarity=0.237 Sum_probs=115.6
Q ss_pred ccccCCCCceeEEEEEEccCCeEEEEEEeecccccCh-----hHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 670 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR-----NKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 670 ~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~-----~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++.||+|++|.||++.+ .|..+++|+......... .....+.+|+.++..+.|++|+.+..++...+..++||
T Consensus 1 ~~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~ 78 (211)
T PRK14879 1 MKLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVM 78 (211)
T ss_pred CcccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEE
Confidence 36799999999999987 677899998664332221 12345778999999999999988887777778889999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccc
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 816 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~ 816 (998)
||++|++|.+++... .. ....++.+++.+|.+||+.|++|+|++|.|||++ ++.++|+|||.+..
T Consensus 79 e~~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 79 EYIEGEPLKDLINSN-----GM-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EEeCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 999999999998653 12 7788899999999999999999999999999999 88999999998843
No 433
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.68 E-value=4.3e-16 Score=162.92 Aligned_cols=133 Identities=18% Similarity=0.197 Sum_probs=108.5
Q ss_pred ccCCCCceeEEEEEEccCCeEEEEEEeecccccC-----hhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEec
Q 001902 672 PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-----RNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 746 (998)
Q Consensus 672 ~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~-----~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~ 746 (998)
.||+|+||.||++.. ++..+++|......... ......+.+|+.++..+.|+++..+..++...+..++||||
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 78 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY 78 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence 379999999999985 67889999865432211 11235677899999999988776666666667778999999
Q ss_pred CCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccc
Q 001902 747 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 816 (998)
Q Consensus 747 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~ 816 (998)
++|++|.+++.... . .++.+++.+|.+||+.|++|+|++|.||+++ ++.++++|||++..
T Consensus 79 ~~g~~l~~~~~~~~---~------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 79 IEGKPLKDVIEEGN---D------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred ECCccHHHHHhhcH---H------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999999875521 1 7789999999999999999999999999999 89999999998844
No 434
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.67 E-value=3e-17 Score=195.14 Aligned_cols=297 Identities=33% Similarity=0.539 Sum_probs=227.3
Q ss_pred ccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEE
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 742 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 742 (998)
..+.+.+++.+-+|.++.++.+.-..+|...+.|+...........+.....+-.++-.-.+|.++.....+......+|
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 45678888999999999999999888887777777665433333333444444444444456777766555666778899
Q ss_pred EEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCC
Q 001902 743 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 822 (998)
Q Consensus 743 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 822 (998)
+|+|..+++|...++.-+ ..+.+-.+.++..+..+++|||...++|+|++|.|+++..+|+.++.|||.....+.-+.
T Consensus 882 ~~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p 959 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPP 959 (1205)
T ss_pred hhHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccC
Confidence 999999999999998753 477778888999999999999999999999999999999999999999995433222111
Q ss_pred CCCCc--ch--hhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCC
Q 001902 823 LLLPT--TN--EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 898 (998)
Q Consensus 823 ~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~ 898 (998)
..-.. .. .-.+..+....+.......+......||+.|.+||.+.+......+|.|++|+++++.++|.+||....
T Consensus 960 ~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~t 1039 (1205)
T KOG0606|consen 960 TTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAET 1039 (1205)
T ss_pred cCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcc
Confidence 10000 00 000111111112222223455667899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCCCCCCCC-CCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhh
Q 001902 899 RQKTFANILHKDLKFPSST-PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 962 (998)
Q Consensus 899 ~~~~~~~i~~~~~~~~~~~-~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~ 962 (998)
....+..|..+.+++|... ..+.++++++..+|..+|.+|..+. ++.++..|+||+.++|.-+
T Consensus 1040 pq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~-~~~e~k~~~~~~~~~~~~l 1103 (1205)
T KOG0606|consen 1040 PQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK-GAAEVKGHPFFQDVDWENL 1103 (1205)
T ss_pred hhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc-cccccccCCccCCCCcccc
Confidence 9999999999999988653 4578899999999999999999943 2448899999999999866
No 435
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.65 E-value=8e-16 Score=160.86 Aligned_cols=138 Identities=21% Similarity=0.154 Sum_probs=108.2
Q ss_pred cccccccCCCCceeEEEEEEccCCeEEEEEEeecccccCh-------------------hHHHHHHHHHHHHHhCCCCC-
Q 001902 667 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR-------------------NKVHRACAEREILDMLDHPF- 726 (998)
Q Consensus 667 y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~-------------------~~~~~~~~E~~il~~l~h~n- 726 (998)
|.+.+.||.|+||.||++.+. +|+.+|+|++........ ........|+.++..+.|++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 788899999999999999874 799999998765321000 01123567888999997774
Q ss_pred -ccceeEEEeeCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCc
Q 001902 727 -VPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 805 (998)
Q Consensus 727 -Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~ 805 (998)
++.+++ ....++||||++|++|..+... .....++.+++.++.++|+.||+|+||||+||+++.++.
T Consensus 96 ~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~ 163 (198)
T cd05144 96 PVPKPID----WNRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEK 163 (198)
T ss_pred CCCceee----cCCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCc
Confidence 444443 2345899999999998765421 335678899999999999999999999999999999999
Q ss_pred EEEEeccCcccc
Q 001902 806 VSLTDFDLSCLT 817 (998)
Q Consensus 806 vkL~DFG~a~~~ 817 (998)
++|+|||++...
T Consensus 164 ~~liDfg~~~~~ 175 (198)
T cd05144 164 IYIIDWPQMVST 175 (198)
T ss_pred EEEEECCccccC
Confidence 999999998544
No 436
>PF13426 PAS_9: PAS domain; PDB: 3ULF_B 3UE6_E 2Z6D_B 2Z6C_B 3P7N_B 1LL8_A 3MJQ_A 3BWL_A 4EET_B 4EEP_A ....
Probab=99.63 E-value=3.5e-15 Score=137.61 Aligned_cols=104 Identities=26% Similarity=0.564 Sum_probs=96.4
Q ss_pred CCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCCEEE
Q 001902 199 QQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFW 278 (998)
Q Consensus 199 ~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~w 278 (998)
|+|++++|. +|+|+++|++|++++||+.++++|+++..++++.........+.+++..+..+..++.+++++|+.+|
T Consensus 1 p~~i~i~d~---~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~ 77 (104)
T PF13426_consen 1 PDGIFILDP---DGRILYVNPAFERLFGYSREELIGKSISDFFPEEDRPEFEEQIERALEEGGSWSGEVRLRRKDGETFW 77 (104)
T ss_dssp -SEEEEEET---TSBEEEE-HHHHHHHTS-HHHHTTSBGGGGCSTTSCHHHHHHHHHHHHHTSSEEEEEEEEETTSEEEE
T ss_pred CEEEEEECC---cCcEEehhHHHHHHHCcCHHHHcCCCcccccCcccchhhHHHHHHHHhcCCceeEEEEEEcCCCCEEE
Confidence 689999999 78899999999999999999999999998888888888889999999999999999999999999999
Q ss_pred EEeeeeEEeCCCCCEEEEEEEEecchh
Q 001902 279 NLLTIAPIKDDEGKVLKFIGMQVEVSK 305 (998)
Q Consensus 279 ~~~~~spi~d~~G~v~~~v~i~~DITe 305 (998)
+.++++|+.+++|++.+++++++||||
T Consensus 78 ~~~~~~~i~~~~g~~~~~i~~~~DiTe 104 (104)
T PF13426_consen 78 VEVSASPIRDEDGEITGIIGIFRDITE 104 (104)
T ss_dssp EEEEEEEEEETTSSEEEEEEEEEEEHH
T ss_pred EEEEEEEEECCCCCEEEEEEEEEECCC
Confidence 999999999999999999999999996
No 437
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.62 E-value=3.2e-17 Score=196.44 Aligned_cols=263 Identities=24% Similarity=0.358 Sum_probs=206.3
Q ss_pred CCcccccccCCCCceeEEEEEEcc-CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCccceeEEEeeCCeEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCG-SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCL 742 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~-~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~l 742 (998)
..|.+.+.||+|+|+.|-.+.... +...+|.|.+.... ........+..|..+-+.+. |.|++.+++.....+..++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 468888999999999999888743 34566777665432 23444455666788878886 9999999999999999999
Q ss_pred EEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCceeccCCCCcEEEecCC-cEEEEeccCccccCCC
Q 001902 743 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH-CQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCK 820 (998)
Q Consensus 743 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH-~~~IiHrDLkP~NILi~~~g-~vkL~DFG~a~~~~~~ 820 (998)
+++|..|+++++.+........+......++.|+..++.|+| ..++.|+|+||+|.+++..+ .+++.|||+|......
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~ 178 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNK 178 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhcccccc
Confidence 999999999999883222225777888899999999999999 99999999999999999999 9999999999654321
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccC-CCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCCCCCCC
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVG-TEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKT 898 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-t~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf~~~~ 898 (998)
. .........+| ++.|+|||.+.+. ...+..|+||+|+++.-+++|..||....
T Consensus 179 ~------------------------g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~ 234 (601)
T KOG0590|consen 179 N------------------------GAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPS 234 (601)
T ss_pred C------------------------CcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccc
Confidence 0 11122344567 9999999999884 45678999999999999999999997755
Q ss_pred hHHHH-HHHHhC--CCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 899 RQKTF-ANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 899 ~~~~~-~~i~~~--~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
..... ...... ......+...+....+++.+++..+|..|.+ ++++..+||+..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s----~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 235 RKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLS----IEELKLDNWLSS 291 (601)
T ss_pred cccccceeecccccccccCccccCChhhhhcccccccCCchhccc----cccccccccccc
Confidence 43322 222222 1123444556778889999999999999999 999999999998
No 438
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.62 E-value=2.6e-15 Score=180.65 Aligned_cols=138 Identities=21% Similarity=0.224 Sum_probs=111.3
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeeccccc-----ChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-----NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~-----~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
.|...+.||+|+||.||++.+... .+++|........ .......+.+|+.+++.++|++++.+..++......
T Consensus 334 ~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 334 RKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK 411 (535)
T ss_pred ccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence 456778999999999999987443 4444433221111 112345678899999999999999888777777778
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccc
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 816 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~ 816 (998)
++||||++|++|.+++. ....++.+++.+|.+||+.||+||||||+|||+ .++.++|+|||++..
T Consensus 412 ~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 412 TIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred EEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 99999999999999885 346789999999999999999999999999999 578999999999854
No 439
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.60 E-value=5.1e-15 Score=153.14 Aligned_cols=138 Identities=20% Similarity=0.216 Sum_probs=99.8
Q ss_pred ccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHH---------------------HHHHHHHHHHhCCCCC--
Q 001902 670 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVH---------------------RACAEREILDMLDHPF-- 726 (998)
Q Consensus 670 ~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~---------------------~~~~E~~il~~l~h~n-- 726 (998)
.+.||+|+||.||+|.+. +++.||+|++............ ....|...+..+.+..
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 578999999999999986 7999999998764322111111 1134666666664443
Q ss_pred ccceeEEEeeCCeEEEEEecCCCCchhH-HHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCcEEEecCC
Q 001902 727 VPALYASFQTKTHVCLITDYCPGGELFL-LLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNG 804 (998)
Q Consensus 727 Iv~l~~~~~~~~~~~lV~E~~~ggsL~~-~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~~IiHrDLkP~NILi~~~g 804 (998)
+++++.+ ...++||||++++++.. .+.... . ...+..++.+++.++.++|. .||+|+||||+||+++ ++
T Consensus 81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~---~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~ 151 (187)
T cd05119 81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR---L-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DG 151 (187)
T ss_pred CCceEec----CCCEEEEEEeCCCCccChhhhhhh---h-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CC
Confidence 4555543 23589999998854321 121110 1 16678899999999999999 9999999999999999 89
Q ss_pred cEEEEeccCcccc
Q 001902 805 HVSLTDFDLSCLT 817 (998)
Q Consensus 805 ~vkL~DFG~a~~~ 817 (998)
.++|+|||.+...
T Consensus 152 ~~~liDfg~a~~~ 164 (187)
T cd05119 152 KVYIIDVPQAVEI 164 (187)
T ss_pred cEEEEECcccccc
Confidence 9999999998543
No 440
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.58 E-value=5.9e-15 Score=169.07 Aligned_cols=199 Identities=24% Similarity=0.320 Sum_probs=152.8
Q ss_pred HHhCCCCCccceeEEEeeCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc-eeccCCCCc
Q 001902 719 LDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGI-IYRDLKPEN 797 (998)
Q Consensus 719 l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~I-iHrDLkP~N 797 (998)
|+.+.|.|+.++++.+.+....++|.+||..|+|.+.+... ...++.-....++++|+.||.|||...| .|+.|+++|
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~-~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~n 79 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE-DIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSN 79 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc-ccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccc
Confidence 35688999999999999999999999999999999999874 3558888889999999999999998865 999999999
Q ss_pred EEEecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCC-------
Q 001902 798 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG------- 870 (998)
Q Consensus 798 ILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~------- 870 (998)
.+++....+||.|||+........ .........-...|.|||.+....
T Consensus 80 Clvd~~w~lklt~~Gl~~~~~~~~-------------------------~~~~~~~~~~~~lw~aPellr~~~~~~~~~~ 134 (484)
T KOG1023|consen 80 CLVDSRWVLKLTDFGLNSLLEETA-------------------------EPEAHHPIRKALLWTAPELLRGALSQSLESA 134 (484)
T ss_pred ceeeeeEEEEechhhhcccccccc-------------------------cccccchhHHHHhccCHHHhccccccccccc
Confidence 999999999999999985542100 000111112456799999997641
Q ss_pred CCChhHHHHHHHHHHHHHcCCCCCCCCCh----HHHHHHHHh-CCC-CCCCC---CCCcHHHHHHHHHccccCccCcCCC
Q 001902 871 HTSAVDWWALGILLYEMLYGYTPFRGKTR----QKTFANILH-KDL-KFPSS---TPTSLHAKQLMYRLLHRDPKSRLGS 941 (998)
Q Consensus 871 ~~~~sDIwSlG~il~eLltG~~Pf~~~~~----~~~~~~i~~-~~~-~~~~~---~~~s~~l~~Ll~~~L~~dP~~Rpt~ 941 (998)
.+.+.||||||+++||+++..-||..... .+.+..+.. +.. ..|.. .....++..++..||..+|..||++
T Consensus 135 ~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~ 214 (484)
T KOG1023|consen 135 LTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSI 214 (484)
T ss_pred ccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccH
Confidence 35679999999999999999999976332 234444444 211 11111 1234468899999999999999995
Q ss_pred hh
Q 001902 942 HE 943 (998)
Q Consensus 942 ~~ 943 (998)
.+
T Consensus 215 ~~ 216 (484)
T KOG1023|consen 215 EQ 216 (484)
T ss_pred HH
Confidence 54
No 441
>PRK09776 putative diguanylate cyclase; Provisional
Probab=99.58 E-value=2.2e-15 Score=197.83 Aligned_cols=268 Identities=9% Similarity=-0.004 Sum_probs=201.4
Q ss_pred cccccccccccccccccccchHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCC-CCcccCCCC
Q 001902 167 SVRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRN-CRFLQGAGT 245 (998)
Q Consensus 167 ~~~~~~dit~~~~~e~~l~~~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~-~~~l~~~~~ 245 (998)
.+....|||+++++|+++++++++++.+++..+++++.+|. +|+++++|+++++++||+.++..+.. +..+.++++
T Consensus 388 ~i~~~~DITerk~~e~~l~~~~~~~~~~~~~~~~~i~~~d~---~~~~~~~n~~~~~l~G~~~~~~~~~~~~~~~~~p~d 464 (1092)
T PRK09776 388 FIAQIEDINELKRTEQVNERLMERITLANEAGGIGIWEWDL---KPNIISWDKRMFELYEIPPHIKPTWQVWYACLHPED 464 (1092)
T ss_pred ehhhHHhhHHHHHHHHHHHHHHHHHHHHHHhcCceEEEEec---CCCeEeeCHHHHHHhCCCcccCCCHHHHHHhcCHhH
Confidence 34456899999999999999999999999999999999999 67799999999999999998854432 224456666
Q ss_pred ChHHHHHHHHHHHcCCcEEEEEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHHHhhcCCCCCchhhh
Q 001902 246 DPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLI 325 (998)
Q Consensus 246 ~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~~l~~~~~~L~~~l~ 325 (998)
.......+...+..+..+..+++.+++|| .+|+.....++.|.+|++.+++++.+|||++|+++++++...++
T Consensus 465 ~~~~~~~~~~~~~~~~~~~~e~r~~~~dG-~~w~~~~~~~~~d~~G~~~~~ig~~~DITerk~~e~~L~~~~~~------ 537 (1092)
T PRK09776 465 RQRVEKEIRDALQGRSPFKLEFRIVVKDG-VRHIRALANRVLNKDGEVERLLGINMDMTEVRQLNEALFQEKER------ 537 (1092)
T ss_pred HHHHHHHHHHHHhcCCCeeEEEEEEcCCc-eEEEEEeeEEEECCCCCEEEEEeeeeehhHHHHHHHHHHHHHHH------
Confidence 66667778888888889999999999999 99999999999999999999999999999999999886642111
Q ss_pred hHHHHHHHHhHhhHHHHHHHcc-CCCCccccCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCC--CCCCccccc-
Q 001902 326 RYDARQKEMATSSVTELVQAMK-KPRSLSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNS--YGGGCRTSM- 401 (998)
Q Consensus 326 ~~d~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~g~~~~~~~~~~~~~~--~~~~~~~~~- 401 (998)
+..+..... .....+..+.+.+.|..+...+||+.+|++|+...++++...... .........
T Consensus 538 -------------l~~~l~~~~~~i~~~D~~g~i~~~N~a~~~l~G~~~~e~iG~~~~~~~~~~~~~~~~~~~~~~~~~~ 604 (1092)
T PRK09776 538 -------------LHITLDSIGEAVVCTDMAMKVTFMNPVAEKMTGWTQEEALGVPLLTVLHITFGDNGPLMENIYSCLT 604 (1092)
T ss_pred -------------HHHHHhccccEEEEECCCCeEEEEcHHHHHHhCCCHHHHcCCCHHHHcccccCCcchhhHHHHHHHh
Confidence 111222222 223445556777899999999999999999998877764321111 000000000
Q ss_pred ---ccccccchhhccccCCccccccccccccCCCCCCCccccccccCCCCCCCCCCCCCchhhHHHHHhhhc
Q 001902 402 ---QRISEVPEKKKQKSGRRSFMGLIGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRK 470 (998)
Q Consensus 402 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~er~~~e~e~r~ 470 (998)
......+.....++|...|+.....+..+.+|...+...+ .+||+++++.+++++.
T Consensus 605 ~~~~~~~~~~~~~~~~~G~~~~~~~~~~pi~~~~g~~~g~v~~-------------~~DITe~k~~e~~L~~ 663 (1092)
T PRK09776 605 SRSAAYLEQDVVLHCRSGGSYDVHYSITPLSTLDGENIGSVLV-------------IQDVTESRKMLRQLSY 663 (1092)
T ss_pred cCCCccccceEEEEeCCCcEEEEEEEeeeeecCCCCEEEEEEE-------------EEecchHHHHHHHHHh
Confidence 0112223344578999999999888888877776654444 6799999998888754
No 442
>PF13426 PAS_9: PAS domain; PDB: 3ULF_B 3UE6_E 2Z6D_B 2Z6C_B 3P7N_B 1LL8_A 3MJQ_A 3BWL_A 4EET_B 4EEP_A ....
Probab=99.57 E-value=1.8e-14 Score=132.83 Aligned_cols=100 Identities=27% Similarity=0.434 Sum_probs=91.5
Q ss_pred CceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCcEEE
Q 001902 482 EKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFW 561 (998)
Q Consensus 482 ~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~~rkdG~~~w 561 (998)
|+||+++|.+|. |+++|++|++++||+++|++|+++..+.+++......+.+.+.+.++..+..+..++++||+.+|
T Consensus 1 p~~i~i~d~~g~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~ 77 (104)
T PF13426_consen 1 PDGIFILDPDGR---ILYVNPAFERLFGYSREELIGKSISDFFPEEDRPEFEEQIERALEEGGSWSGEVRLRRKDGETFW 77 (104)
T ss_dssp -SEEEEEETTSB---EEEE-HHHHHHHTS-HHHHTTSBGGGGCSTTSCHHHHHHHHHHHHHTSSEEEEEEEEETTSEEEE
T ss_pred CEEEEEECCcCc---EEehhHHHHHHHCcCHHHHcCCCcccccCcccchhhHHHHHHHHhcCCceeEEEEEEcCCCCEEE
Confidence 689999999777 99999999999999999999999999999888888899999999999889999999999999999
Q ss_pred EEEEEeeeccCC----EEEEEEecCCc
Q 001902 562 NLFHLQPMRDQK----YFIGVQLDGSE 584 (998)
Q Consensus 562 v~~~~spi~d~~----~~vgi~rDITe 584 (998)
++++++|+.+++ +++++++||||
T Consensus 78 ~~~~~~~i~~~~g~~~~~i~~~~DiTe 104 (104)
T PF13426_consen 78 VEVSASPIRDEDGEITGIIGIFRDITE 104 (104)
T ss_dssp EEEEEEEEEETTSSEEEEEEEEEEEHH
T ss_pred EEEEEEEEECCCCCEEEEEEEEEECCC
Confidence 999999999865 89999999996
No 443
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.57 E-value=2.7e-14 Score=153.27 Aligned_cols=137 Identities=23% Similarity=0.351 Sum_probs=105.2
Q ss_pred cccC-CCCceeEEEEEEccCCeEEEEEEeecccc----------cChhHHHHHHHHHHHHHhCCCCCc--cceeEEEeeC
Q 001902 671 KPLG-SGDTGSVHLVELCGSGQYFAMKAMDKGVM----------LNRNKVHRACAEREILDMLDHPFV--PALYASFQTK 737 (998)
Q Consensus 671 ~~LG-~G~~g~Vy~a~~~~~~~~valK~i~~~~~----------~~~~~~~~~~~E~~il~~l~h~nI--v~l~~~~~~~ 737 (998)
..|| .||.|+||.+.. .+..++||.+..... .+........+|+.++..|.|++| +.++++....
T Consensus 37 ~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 4567 889999999887 477899998864211 011234567789999999998775 6677664332
Q ss_pred -C---eEEEEEecCCC-CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEecc
Q 001902 738 -T---HVCLITDYCPG-GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFD 812 (998)
Q Consensus 738 -~---~~~lV~E~~~g-gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG 812 (998)
. ..++||||++| .+|.+++... .++... +.+|+.+|.+||++||+||||||.|||++.++.++|+|||
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg 187 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA---PLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFD 187 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC---CCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECC
Confidence 2 23599999997 6898888652 355543 5689999999999999999999999999999999999999
Q ss_pred Cccc
Q 001902 813 LSCL 816 (998)
Q Consensus 813 ~a~~ 816 (998)
.+..
T Consensus 188 ~~~~ 191 (239)
T PRK01723 188 RGEL 191 (239)
T ss_pred Cccc
Confidence 8844
No 444
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.53 E-value=5.9e-14 Score=138.62 Aligned_cols=132 Identities=23% Similarity=0.245 Sum_probs=111.9
Q ss_pred cccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCC--CCccceeEEEeeCCeEEEEEec
Q 001902 669 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH--PFVPALYASFQTKTHVCLITDY 746 (998)
Q Consensus 669 ~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h--~nIv~l~~~~~~~~~~~lV~E~ 746 (998)
+++.||.|.++.||++... +..+++|.+..... ...+..|+.+++.+.+ .++++++.++...+..+++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEec--CCeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence 4578999999999999984 37899999875422 3567889999999976 5899999988888899999999
Q ss_pred CCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCCCcEEEecCCcEEEEeccCccc
Q 001902 747 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ---GIIYRDLKPENVLLQGNGHVSLTDFDLSCL 816 (998)
Q Consensus 747 ~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~---~IiHrDLkP~NILi~~~g~vkL~DFG~a~~ 816 (998)
++|..+..+ +......++.+++.+|++||.. +++|+|++|+||+++..+.++++|||.+..
T Consensus 75 ~~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 75 IEGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred cCCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 988877654 4456677889999999999985 799999999999999989999999998854
No 445
>PF08448 PAS_4: PAS fold; InterPro: IPR013656 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. ; PDB: 3K3D_A 3K3C_B 3KX0_X 3FC7_B 3LUQ_D 3MXQ_A 3BWL_C 3FG8_A.
Probab=99.50 E-value=1.6e-13 Score=127.97 Aligned_cols=110 Identities=24% Similarity=0.365 Sum_probs=99.7
Q ss_pred HHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCC
Q 001902 195 LSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDG 274 (998)
Q Consensus 195 ld~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG 274 (998)
|++++++++++|. +|+|+++|+++++++|++.++++|+++..++++.........+.+++.++.....+..... +|
T Consensus 1 l~~~p~~i~v~D~---~~~i~~~N~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 76 (110)
T PF08448_consen 1 LDSSPDGIFVIDP---DGRIVYANQAAAELFGVSPEELIGRSLFDLLPPEDREEFQAALRRALAGGEPVFFEEILLR-DG 76 (110)
T ss_dssp HHHCSSEEEEEET---TSBEEEE-HHHHHHHTSTHHHHTTSBHHHHSCCGCHHHHHHHHHHHHHHTSEEEEEEEECT-TS
T ss_pred CCCCCceeEEECC---CCEEEEEHHHHHHHhCCCHHHHhhccchhccccchhhhhHHHHHHhhccCceEEEEEEEee-cC
Confidence 6899999999999 8889999999999999999999999999888888778888889999999888776666544 99
Q ss_pred CEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhH
Q 001902 275 TPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTE 308 (998)
Q Consensus 275 ~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~ 308 (998)
...|+.++++|+.|.+|++.|++++++|||++|+
T Consensus 77 ~~~~~~~~~~Pi~~~~g~~~g~~~~~~DiT~~rr 110 (110)
T PF08448_consen 77 EERWFEVSISPIFDEDGEVVGVLVIIRDITERRR 110 (110)
T ss_dssp CEEEEEEEEEEEECTTTCEEEEEEEEEEECCHHH
T ss_pred CcEEEEEEEEEeEcCCCCEEEEEEEEEECchhhC
Confidence 9999999999999999999999999999999985
No 446
>PF00989 PAS: PAS fold; InterPro: IPR013767 PAS domains are involved in many signalling proteins where they are used as a signal sensor domain []. PAS domains appear in archaea, bacteria and eukaryotes. Several PAS-domain proteins are known to detect their signal by way of an associated cofactor. Haeme, flavin, and a 4-hydroxycinnamyl chromophore are used in different proteins. The PAS domain was named after three proteins that it occurs in: Per- period circadian protein Arnt- Ah receptor nuclear translocator protein Sim- single-minded protein. PAS domains are often associated with PAC domains IPR001610 from INTERPRO. It appears that these domains are directly linked, and that together they form the conserved 3D PAS fold. The division between the PAS and PAC domains is caused by major differences in sequences in the region connecting these two motifs []. In human PAS kinase, this region has been shown to be very flexible, and adopts different conformations depending on the bound ligand []. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels [].; GO: 0006355 regulation of transcription, DNA-dependent; PDB: 2GJ3_A 4F3L_B 1XFN_A 1OTD_A 2PYR_A 1KOU_A 1XFQ_A 2ZOI_A 2ZOH_A 1OTA_A ....
Probab=99.50 E-value=1.9e-13 Score=128.17 Aligned_cols=112 Identities=21% Similarity=0.369 Sum_probs=96.3
Q ss_pred HHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcEE-EEE
Q 001902 189 DIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYC-GRL 267 (998)
Q Consensus 189 ~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~-~e~ 267 (998)
++|++++++++++++++|. +|+|+|+|++++++|||+.++++|+++..+++++........+.+.+..+.... .+.
T Consensus 1 e~~~~i~~~~~~~i~~~d~---~g~I~~~N~a~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (113)
T PF00989_consen 1 ERYRAILENSPDGIFVIDE---DGRILYVNQAAEELLGYSREELIGKSLFDLIHPEDRRELRERLRQALSQGESGESFEV 77 (113)
T ss_dssp HHHHHHHHCSSSEEEEEET---TSBEEEECHHHHHHHSS-HHHHTTSBGGGGCSGGGHHHHHHHHHHHHHHCCHECEEEE
T ss_pred CHHHHHHhcCCceEEEEeC---cCeEEEECHHHHHHHccCHHHHcCCcHHHhcCchhhHHHHHHHHHHHHcCCCceeEEE
Confidence 5789999999999999998 788999999999999999999999999988887665567778888887777644 344
Q ss_pred EEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecc
Q 001902 268 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEV 303 (998)
Q Consensus 268 ~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DI 303 (998)
....++|..+|+.+..+|+.+.+|++.|++++++||
T Consensus 78 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~DI 113 (113)
T PF00989_consen 78 RFRLRDGRPRWVEVRASPVRDEDGQIIGILVIFRDI 113 (113)
T ss_dssp EEEETTSCEEEEEEEEEEEEETTEEEEEEEEEEEE-
T ss_pred EEEecCCcEEEEEEEEEEEEeCCCCEEEEEEEEEeC
Confidence 444579999999999999999999999999999997
No 447
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.42 E-value=5.5e-13 Score=155.43 Aligned_cols=188 Identities=21% Similarity=0.247 Sum_probs=119.7
Q ss_pred CCCchhhhccCCcccCCCCCCCCCCchhhHHhhhccccccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeeccc
Q 001902 623 NLTPEDLWANHSKVVHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV 702 (998)
Q Consensus 623 ~l~p~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~ 702 (998)
.+-|..+...-+++....|+.........+.+-+.....-....|. .+.||.|++|+||+|.. .+|+.||||+.+++.
T Consensus 76 dllp~~~~~~L~~Lqd~v~p~~~~~~~~~l~~elg~~~~~~F~~fd-~~plasaSigQVh~A~l-~~G~~VaVKv~rp~i 153 (437)
T TIGR01982 76 DLLPADIAEELSLLQDRVPPFDFKVARKVIEAALGGPLEELFAEFE-EKPLAAASIAQVHRARL-VDGKEVAVKVLRPGI 153 (437)
T ss_pred ccCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHhCcCHHHHHhhCC-CcceeeeehhheEEEEe-cCCCEEEEEeeCCCc
Confidence 3457777777777777776554322222222222211111122333 36799999999999997 479999999987652
Q ss_pred ccChh---------------------------H----H------HHHHHHHHHHHhC-----CCCCc--cceeEEEeeCC
Q 001902 703 MLNRN---------------------------K----V------HRACAEREILDML-----DHPFV--PALYASFQTKT 738 (998)
Q Consensus 703 ~~~~~---------------------------~----~------~~~~~E~~il~~l-----~h~nI--v~l~~~~~~~~ 738 (998)
...-. . . -.+.+|...+.++ ++++| ++++. ....
T Consensus 154 ~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~ 231 (437)
T TIGR01982 154 EKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRREAANASELGENFKNDPGVYVPEVYW--DRTS 231 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhcCCCCCEEeCCEeh--hhcC
Confidence 11100 0 0 0233455555444 23433 33332 2334
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHH-HHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVV-ALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~-aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
..+|||||++|++|.++....... . ....++..++. .+..+|..|++|+|+||.||+++.+|.++|+|||++..+
T Consensus 232 ~~vLvmE~i~G~~L~~~~~~~~~~-~---~~~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l 307 (437)
T TIGR01982 232 ERVLTMEWIDGIPLSDIAALDEAG-L---DRKALAENLARSFLNQVLRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRL 307 (437)
T ss_pred CceEEEEeECCcccccHHHHHhcC-C---CHHHHHHHHHHHHHHHHHhCCceeCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence 568999999999998876532111 2 23445666665 478899999999999999999999999999999998665
Q ss_pred C
Q 001902 818 S 818 (998)
Q Consensus 818 ~ 818 (998)
+
T Consensus 308 ~ 308 (437)
T TIGR01982 308 S 308 (437)
T ss_pred C
Confidence 4
No 448
>PRK13557 histidine kinase; Provisional
Probab=99.40 E-value=2.7e-12 Score=155.22 Aligned_cols=134 Identities=37% Similarity=0.726 Sum_probs=121.7
Q ss_pred ccccchHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCC
Q 001902 182 KGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ 261 (998)
Q Consensus 182 ~~l~~~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~ 261 (998)
+.....+..|+.+++.++++|+++|..+.+|+|+|+|++|++++||+.+|++|+++..+.+++........++..+..+.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~g~i~~~N~a~~~~~G~~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~ 102 (540)
T PRK13557 23 DVSDHRSDIFFAAVETTRMPMIVTDPNQPDNPIVFANRAFLEMTGYAAEEIIGNNCRFLQGPETDRATVAEVRDAIAERR 102 (540)
T ss_pred hhhhhhhHHHHHHHHhCcCcEEEEcCCCCCCCEEEEcHHHHHHhCCCHHHhcCCChHhhcCCCCCHHHHHHHHHHHHcCC
Confidence 44556689999999999999999998777899999999999999999999999999988888777778888888899888
Q ss_pred cEEEEEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHHHhhc
Q 001902 262 SYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (998)
Q Consensus 262 ~~~~e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~~l~~ 315 (998)
.+..+++.++++|+.+|+.+++.|+.+.+|.+.+++++.+|||+++++++++..
T Consensus 103 ~~~~~~~~~~~~G~~~~~~~~~~~i~~~~g~~~~~~~~~~dit~~~~~e~~l~~ 156 (540)
T PRK13557 103 EIATEILNYRKDGSSFWNALFVSPVYNDAGDLVYFFGSQLDVSRRRDAEDALRQ 156 (540)
T ss_pred CceEEEEEEeCCCCEEEEEEEEEEeECCCCCEEEEEEEecChHHHHHHHHHHHH
Confidence 888888889999999999999999999999999999999999999999877543
No 449
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.40 E-value=2.2e-13 Score=156.08 Aligned_cols=262 Identities=21% Similarity=0.208 Sum_probs=197.2
Q ss_pred ccCCcccccccCC--CCceeEEEEEE--ccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeC
Q 001902 663 NLQHFRPIKPLGS--GDTGSVHLVEL--CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK 737 (998)
Q Consensus 663 ~~~~y~~~~~LG~--G~~g~Vy~a~~--~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~ 737 (998)
....|.+...+|. |.+|.||.+.. ..++..+|+|.-+.-. ........-.+|......+ .|++.++.+..+...
T Consensus 112 ~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~-s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~ 190 (524)
T KOG0601|consen 112 FDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPF-SPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGS 190 (524)
T ss_pred hhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCC-CCccccccccchhhcccccCccccccccCcccccC
Confidence 3456778889999 99999999998 8889999999743221 1122223334556555566 589999989999999
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHH----HHHHHHHCCceeccCCCCcEEEecC-CcEEEEecc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVV----ALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFD 812 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~----aL~~LH~~~IiHrDLkP~NILi~~~-g~vkL~DFG 812 (998)
+..++-+|+| +.+|..+.... ...+++..++.+..+... ||..+|..+|+|-|+||.||++..+ ..++++|||
T Consensus 191 ~~lfiqtE~~-~~sl~~~~~~~-~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~ 268 (524)
T KOG0601|consen 191 GILFIQTELC-GESLQSYCHTP-CNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFG 268 (524)
T ss_pred Ccceeeeccc-cchhHHhhhcc-cccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcc
Confidence 9999999999 68888776543 455899999999999999 9999999999999999999999999 889999999
Q ss_pred CccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCC
Q 001902 813 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYT 892 (998)
Q Consensus 813 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~ 892 (998)
+...++...... -........|...|++||.+.+. ++...|||+||.++.+..+|..
T Consensus 269 ~v~~i~~~~~~~----------------------~~~~~~r~~~~~~Y~~ke~~~~l-~~~~~di~sl~ev~l~~~l~~~ 325 (524)
T KOG0601|consen 269 LVSKISDGNFSS----------------------VFKVSKRPEGDCIYAAKELLNGL-ATFASDIFSLGEVILEAILGSH 325 (524)
T ss_pred eeEEccCCcccc----------------------ceeeeecCCCCceEeChhhhccc-cchHhhhcchhhhhHhhHhhcc
Confidence 987665333211 01111233578899999987554 6789999999999999988776
Q ss_pred CCCCC--ChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 893 PFRGK--TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 893 Pf~~~--~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
+.... +....+..+ -++.......+..+...+..|++.+|-.|++ ++.+++|++....
T Consensus 326 ~~~~g~~~~W~~~r~~---~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~----~q~~~~l~~i~s~ 385 (524)
T KOG0601|consen 326 LPSVGKNSSWSQLRQG---YIPLEFCEGGSSSLRSVTSQMLDEDPRLRLT----AQILTALNVIHSK 385 (524)
T ss_pred cccCCCCCCccccccc---cCchhhhcCcchhhhhHHHHhcCcchhhhhH----HHHHhccccccch
Confidence 66543 222222211 1222223345666777999999999999999 9999999998854
No 450
>PRK11091 aerobic respiration control sensor protein ArcB; Provisional
Probab=99.40 E-value=8.8e-13 Score=166.79 Aligned_cols=142 Identities=13% Similarity=0.120 Sum_probs=129.3
Q ss_pred cccccccccccccccchHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHH
Q 001902 171 SGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDV 250 (998)
Q Consensus 171 ~~dit~~~~~e~~l~~~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~ 250 (998)
..+|+++++++++++++++.++.++++++++|+++|. +|+|+++|++|++++||+.++++|+++..+++++......
T Consensus 137 ~~~i~~r~~~~~~l~~~~~~l~~il~~~~~~i~~~D~---~g~i~~~N~a~~~l~G~~~~eliG~~~~~l~~~~~~~~~~ 213 (779)
T PRK11091 137 KNEIKEREETQIELEQQSSLLRSFLDASPDLVYYRNE---DGEFSGCNRAMELLTGKSEKQLIGLTPKDVYSPEAAEKVI 213 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCcceEEEECC---CCcEEeEcHHHHHHhCcCHHHHcCCChHHhCCHHHHHHHH
Confidence 4788999999999999999999999999999999998 7889999999999999999999999998888776655666
Q ss_pred HHHHHHHHcCCcEEEEEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHHHhhc
Q 001902 251 AKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (998)
Q Consensus 251 ~~i~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~~l~~ 315 (998)
......+..+..+..+.+..++||..+|+.++..|+.+.+|.+.|++++++|||++|+++++++.
T Consensus 214 ~~~~~~~~~~~~~~~e~~~~~~~G~~~~~~~~~~pi~~~~g~~~g~v~~~~DITe~k~~e~~l~~ 278 (779)
T PRK11091 214 ETDEKVFRHNVSLTYEQWLDYPDGRKACFELRKVPFYDRVGKRHGLMGFGRDITERKRYQDALEK 278 (779)
T ss_pred HHHHHHHhcCCCeEEEEEEEcCCCCEEEEEEEeeeEEcCCCCEEEEEEEEeehhHHHHHHHHHHH
Confidence 66677778888888899999999999999999999999999999999999999999999988654
No 451
>PF00989 PAS: PAS fold; InterPro: IPR013767 PAS domains are involved in many signalling proteins where they are used as a signal sensor domain []. PAS domains appear in archaea, bacteria and eukaryotes. Several PAS-domain proteins are known to detect their signal by way of an associated cofactor. Haeme, flavin, and a 4-hydroxycinnamyl chromophore are used in different proteins. The PAS domain was named after three proteins that it occurs in: Per- period circadian protein Arnt- Ah receptor nuclear translocator protein Sim- single-minded protein. PAS domains are often associated with PAC domains IPR001610 from INTERPRO. It appears that these domains are directly linked, and that together they form the conserved 3D PAS fold. The division between the PAS and PAC domains is caused by major differences in sequences in the region connecting these two motifs []. In human PAS kinase, this region has been shown to be very flexible, and adopts different conformations depending on the bound ligand []. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels [].; GO: 0006355 regulation of transcription, DNA-dependent; PDB: 2GJ3_A 4F3L_B 1XFN_A 1OTD_A 2PYR_A 1KOU_A 1XFQ_A 2ZOI_A 2ZOH_A 1OTA_A ....
Probab=99.40 E-value=1.6e-12 Score=121.70 Aligned_cols=106 Identities=22% Similarity=0.317 Sum_probs=91.2
Q ss_pred HHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEE-EEEEE
Q 001902 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVT-VQLIN 552 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~-~e~~~ 552 (998)
|++++++++++++++|.+|+ |+++|++|+++|||+.++++|+++..+.++++.......+.+.+..+.... .+...
T Consensus 3 ~~~i~~~~~~~i~~~d~~g~---I~~~N~a~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (113)
T PF00989_consen 3 YRAILENSPDGIFVIDEDGR---ILYVNQAAEELLGYSREELIGKSLFDLIHPEDRRELRERLRQALSQGESGESFEVRF 79 (113)
T ss_dssp HHHHHHCSSSEEEEEETTSB---EEEECHHHHHHHSS-HHHHTTSBGGGGCSGGGHHHHHHHHHHHHHHCCHECEEEEEE
T ss_pred HHHHHhcCCceEEEEeCcCe---EEEECHHHHHHHccCHHHHcCCcHHHhcCchhhHHHHHHHHHHHHcCCCceeEEEEE
Confidence 78999999999999999888 999999999999999999999999988888766667788888887777643 44445
Q ss_pred EecCCcEEEEEEEEeeeccCC----EEEEEEecC
Q 001902 553 YTKSGKKFWNLFHLQPMRDQK----YFIGVQLDG 582 (998)
Q Consensus 553 ~rkdG~~~wv~~~~spi~d~~----~~vgi~rDI 582 (998)
..++|+.+|+.++.+|+.+.+ +++++++||
T Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~DI 113 (113)
T PF00989_consen 80 RLRDGRPRWVEVRASPVRDEDGQIIGILVIFRDI 113 (113)
T ss_dssp EETTSCEEEEEEEEEEEEETTEEEEEEEEEEEE-
T ss_pred EecCCcEEEEEEEEEEEEeCCCCEEEEEEEEEeC
Confidence 557999999999999999887 889999997
No 452
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.40 E-value=1.9e-13 Score=160.81 Aligned_cols=187 Identities=17% Similarity=0.206 Sum_probs=115.6
Q ss_pred CCchhhhccCCcccCCCCCCCCCCchhhHHhhhccccccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccc
Q 001902 624 LTPEDLWANHSKVVHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM 703 (998)
Q Consensus 624 l~p~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~ 703 (998)
+-|..+...-+++....|+.........+.+-+.....-....|.. +.||+|++|+||+|..+.+|+.||||+.+++..
T Consensus 79 llP~~~~~eL~~Lqd~vpp~~~~~~~~~ie~elG~~~~~~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~ 157 (537)
T PRK04750 79 LFPPDIADELALLQDRVPPFDGALARAIIEKALGGPVEEWFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDIL 157 (537)
T ss_pred cCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhCCCHHHHHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchH
Confidence 4577777777777777665543222222222222221112356777 899999999999999988899999999986521
Q ss_pred cC---------------------------h----hHHHHH------HHHHHHHHhC----CCCCccceeEEEe-eCCeEE
Q 001902 704 LN---------------------------R----NKVHRA------CAEREILDML----DHPFVPALYASFQ-TKTHVC 741 (998)
Q Consensus 704 ~~---------------------------~----~~~~~~------~~E~~il~~l----~h~nIv~l~~~~~-~~~~~~ 741 (998)
.. . +..+.+ .+|...+.++ .+...+.+-.+|. .....+
T Consensus 158 ~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~V 237 (537)
T PRK04750 158 PVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETV 237 (537)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCce
Confidence 10 0 111122 2333333333 2333333333332 245578
Q ss_pred EEEecCCCCchhHHH--hhCCC--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCC----cEEEEeccC
Q 001902 742 LITDYCPGGELFLLL--DRQPT--KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG----HVSLTDFDL 813 (998)
Q Consensus 742 lV~E~~~ggsL~~~l--~~~~~--~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g----~vkL~DFG~ 813 (998)
|||||++|+++.++. ...+. ..+....+..++.| ++..|++|+|+||.||+++.+| .++++|||+
T Consensus 238 LvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q-------if~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGi 310 (537)
T PRK04750 238 MVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ-------VFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGI 310 (537)
T ss_pred EEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH-------HHhCCeeeCCCChHHeEEecCCCCCCeEEEEecce
Confidence 999999999998753 22210 02333334444444 4468999999999999999888 999999999
Q ss_pred ccccC
Q 001902 814 SCLTS 818 (998)
Q Consensus 814 a~~~~ 818 (998)
+...+
T Consensus 311 vg~l~ 315 (537)
T PRK04750 311 VGSLN 315 (537)
T ss_pred EEECC
Confidence 86654
No 453
>PRK13559 hypothetical protein; Provisional
Probab=99.39 E-value=7e-12 Score=143.81 Aligned_cols=128 Identities=40% Similarity=0.755 Sum_probs=114.5
Q ss_pred chHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEE
Q 001902 186 RVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG 265 (998)
Q Consensus 186 ~~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~ 265 (998)
.+.+.|+.+++.++++|+++|..+.+|+|+++|++|++++||+.+|++|+++..+.++.........+...+..+..+..
T Consensus 40 ~~~~~~~~~~e~~~~~i~i~D~~~~~g~i~~~N~a~~~l~G~~~~e~iG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (361)
T PRK13559 40 ASGRLFEQAMEQTRMAMCITDPHQPDLPIVLANQAFLDLTGYAAEEVVGRNCRFLQGAATDPIAVAKIRAAIAAEREIVV 119 (361)
T ss_pred hhhhHHHHHHHhCCCcEEEecCCCCCCcEEEEchHHHHHhCCCHHHHcCCChhhhcCCCCCHHHHHHHHHHhccCCceEE
Confidence 55678999999999999999986667889999999999999999999999988777766666667778888888888888
Q ss_pred EEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHHHh
Q 001902 266 RLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDK 313 (998)
Q Consensus 266 e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~~l 313 (998)
+...+++||..+|+.++..|+++.+|.+.+++++++|||++|+++++.
T Consensus 120 e~~~~~~dG~~~~~~~~~~~i~d~~G~~~~~v~~~~DITerk~~e~~~ 167 (361)
T PRK13559 120 ELLNYRKDGEPFWNALHLGPVYGEDGRLLYFFGSQWDVTDIRAVRALE 167 (361)
T ss_pred EEEEEcCCCCEEEEEEEEEEEEcCCCCEEEeeeeeeehhcchhhHHHH
Confidence 999999999999999999999999999999999999999999887553
No 454
>PF08448 PAS_4: PAS fold; InterPro: IPR013656 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. ; PDB: 3K3D_A 3K3C_B 3KX0_X 3FC7_B 3LUQ_D 3MXQ_A 3BWL_C 3FG8_A.
Probab=99.38 E-value=1.6e-12 Score=121.13 Aligned_cols=106 Identities=24% Similarity=0.309 Sum_probs=94.6
Q ss_pred HhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCC
Q 001902 478 LERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSG 557 (998)
Q Consensus 478 ~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~~rkdG 557 (998)
|++++++|+++|.+|+ |+++|+++++++|++.++++|+++..+.++.........+.+++.++.....+..... +|
T Consensus 1 l~~~p~~i~v~D~~~~---i~~~N~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 76 (110)
T PF08448_consen 1 LDSSPDGIFVIDPDGR---IVYANQAAAELFGVSPEELIGRSLFDLLPPEDREEFQAALRRALAGGEPVFFEEILLR-DG 76 (110)
T ss_dssp HHHCSSEEEEEETTSB---EEEE-HHHHHHHTSTHHHHTTSBHHHHSCCGCHHHHHHHHHHHHHHTSEEEEEEEECT-TS
T ss_pred CCCCCceeEEECCCCE---EEEEHHHHHHHhCCCHHHHhhccchhccccchhhhhHHHHHHhhccCceEEEEEEEee-cC
Confidence 6899999999999777 9999999999999999999999998888888888888889999999888776666655 99
Q ss_pred cEEEEEEEEeeeccCC----EEEEEEecCCcccc
Q 001902 558 KKFWNLFHLQPMRDQK----YFIGVQLDGSEHLE 587 (998)
Q Consensus 558 ~~~wv~~~~spi~d~~----~~vgi~rDITerk~ 587 (998)
..+|+.++++|+.+.. +++++++|||++|+
T Consensus 77 ~~~~~~~~~~Pi~~~~g~~~g~~~~~~DiT~~rr 110 (110)
T PF08448_consen 77 EERWFEVSISPIFDEDGEVVGVLVIIRDITERRR 110 (110)
T ss_dssp CEEEEEEEEEEEECTTTCEEEEEEEEEEECCHHH
T ss_pred CcEEEEEEEEEeEcCCCCEEEEEEEEEECchhhC
Confidence 9999999999998765 89999999999984
No 455
>TIGR02040 PpsR-CrtJ transcriptional regulator PpsR. This model represents the transcriptional regulator PpsR which is strictly associated with photosynthetic proteobacteria and found in photosynthetic operons. PpsR has been reported to be a repressor. These proteins contain a Helix-Turn_Helix motif of the "fis" type (pfam02954).
Probab=99.36 E-value=2e-12 Score=152.46 Aligned_cols=214 Identities=13% Similarity=0.037 Sum_probs=145.6
Q ss_pred CccccCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCCCCCC---cccccccccccchhhccccCCcccccccccc
Q 001902 351 SLSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGG---CRTSMQRISEVPEKKKQKSGRRSFMGLIGRK 427 (998)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~e~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (998)
-++..+.+.++|..+...+||+.+|++|++..+++++..+...... ....+....+++..+..++|...|+.+...+
T Consensus 11 ~~d~~g~i~~~n~~~~~~~g~~~~el~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~~~~~~~~ 90 (442)
T TIGR02040 11 LLDAEGVVREVAANPHHPSFEQLSEWEGRRWEEIVTAESVEKFELRLSEALRTGRGAVRVELNHIDPSSFELPMRFILVR 90 (442)
T ss_pred EECCCCcEEEEEECCCcccccccccCCCCcHhHhhCcchHHHHHHHHHHHhccCCCcceEeeccCCCCCCccCeEEEEEE
Confidence 3455677888999999999999999999999999976432221111 1111111223344455677777777776544
Q ss_pred ccCCCCCCCccccccccCCCCCCCCCCCCCchhhHHH-----------HH---hhhcc-ccHHHHHhhcCceEEEEcC-C
Q 001902 428 SQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVR-----------QK---EMRKG-IDLATTLERIEKNFVITDP-R 491 (998)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~er~~~-----------e~---e~r~~-~~l~~i~e~~~d~i~i~D~-~ 491 (998)
..+..+. -...+|+++++.. |+ ++++. ..|+.++++++++|+++|. +
T Consensus 91 ~~~~~~~-----------------~~i~rDi~~~~~~~~~l~~~~~~~e~~~~~l~~~e~r~~~l~e~~~~~i~~~d~~~ 153 (442)
T TIGR02040 91 LGADRGV-----------------LALGRDLRAVAELQQQLVAAQQAMERDYWTLREMETRYRVVLEVSSDAVLLVDMST 153 (442)
T ss_pred eCCCCeE-----------------EEEecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEEECCC
Confidence 3332111 1225677654433 22 22221 2488999999999999997 6
Q ss_pred CCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCcEEEEEEEEeeecc
Q 001902 492 LPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRD 571 (998)
Q Consensus 492 G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~~rkdG~~~wv~~~~spi~d 571 (998)
|. |+++|++|++|+||+.+|++|+++..+.++++.......+......+.....++. .++|...| .+.++++..
T Consensus 154 g~---i~~~N~a~~~l~G~~~~el~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~--~~~~~~~~-~~~~~~~~~ 227 (442)
T TIGR02040 154 GR---IVEANSAAAALLGGVGQSLVGRAFPQEFEGRRREELMLTLRNVRATGSAAPVRIL--LRRSQKRL-LVVVSVFRQ 227 (442)
T ss_pred CE---EEEEcHHHHHHhCcCHHHHcCCCHHHhCCHHHHHHHHHHHHHHHhcCCCcceEEE--EcCCCeEE-EEEEEEEEe
Confidence 77 9999999999999999999999988888887777677777777777765544444 34444444 445667765
Q ss_pred CC--EEEEEEecCCcccc
Q 001902 572 QK--YFIGVQLDGSEHLE 587 (998)
Q Consensus 572 ~~--~~vgi~rDITerk~ 587 (998)
++ .+++.++|||++++
T Consensus 228 ~~~~~~l~~~~dit~~~~ 245 (442)
T TIGR02040 228 DGESLFLCQLSPAGATQP 245 (442)
T ss_pred CCceEEEEEEcccchhhh
Confidence 54 78888999999975
No 456
>PRK13559 hypothetical protein; Provisional
Probab=99.34 E-value=1.5e-11 Score=141.10 Aligned_cols=114 Identities=46% Similarity=0.874 Sum_probs=101.8
Q ss_pred HHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001902 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~~ 553 (998)
|+.++++++++|+++|.+|.++.|+++|++|++++||+.+|++|+++..+.++.........+...+..+..+..+...+
T Consensus 45 ~~~~~e~~~~~i~i~D~~~~~g~i~~~N~a~~~l~G~~~~e~iG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 124 (361)
T PRK13559 45 FEQAMEQTRMAMCITDPHQPDLPIVLANQAFLDLTGYAAEEVVGRNCRFLQGAATDPIAVAKIRAAIAAEREIVVELLNY 124 (361)
T ss_pred HHHHHHhCCCcEEEecCCCCCCcEEEEchHHHHHhCCCHHHHcCCChhhhcCCCCCHHHHHHHHHHhccCCceEEEEEEE
Confidence 68899999999999998655566999999999999999999999998877777777777777888888888888899999
Q ss_pred ecCCcEEEEEEEEeeeccCC----EEEEEEecCCcccc
Q 001902 554 TKSGKKFWNLFHLQPMRDQK----YFIGVQLDGSEHLE 587 (998)
Q Consensus 554 rkdG~~~wv~~~~spi~d~~----~~vgi~rDITerk~ 587 (998)
++||+.+|+.++..|+++.+ +++++++|||++|+
T Consensus 125 ~~dG~~~~~~~~~~~i~d~~G~~~~~v~~~~DITerk~ 162 (361)
T PRK13559 125 RKDGEPFWNALHLGPVYGEDGRLLYFFGSQWDVTDIRA 162 (361)
T ss_pred cCCCCEEEEEEEEEEEEcCCCCEEEeeeeeeehhcchh
Confidence 99999999999999998776 78899999999996
No 457
>PRK11091 aerobic respiration control sensor protein ArcB; Provisional
Probab=99.31 E-value=8.4e-12 Score=157.92 Aligned_cols=155 Identities=12% Similarity=0.105 Sum_probs=125.8
Q ss_pred CCCchhhHHHHHhhhccc-cHHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHH
Q 001902 455 RPDSVDDKVRQKEMRKGI-DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATV 533 (998)
Q Consensus 455 ~~di~er~~~e~e~r~~~-~l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~ 533 (998)
..++.+|++.+++++... .|+.++++++++|+++|.+|+ |+++|++|++++||+.+|++|+++..+.+++......
T Consensus 137 ~~~i~~r~~~~~~l~~~~~~l~~il~~~~~~i~~~D~~g~---i~~~N~a~~~l~G~~~~eliG~~~~~l~~~~~~~~~~ 213 (779)
T PRK11091 137 KNEIKEREETQIELEQQSSLLRSFLDASPDLVYYRNEDGE---FSGCNRAMELLTGKSEKQLIGLTPKDVYSPEAAEKVI 213 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCcceEEEECCCCc---EEeEcHHHHHHhCcCHHHHcCCChHHhCCHHHHHHHH
Confidence 346677776666665433 488999999999999999877 9999999999999999999999988888887766676
Q ss_pred HHHHHHHhcCCcEEEEEEEEecCCcEEEEEEEEeeeccCC----EEEEEEecCCccccccccCcchhhhhHHHHHHHHhh
Q 001902 534 RKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQK----YFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTA 609 (998)
Q Consensus 534 ~~i~~~l~~g~~~~~e~~~~rkdG~~~wv~~~~spi~d~~----~~vgi~rDITerk~~~~~~~~e~~~~~~~~~~k~~~ 609 (998)
......+..+..+..+.+..++||..+|+.++..|+.+.+ +++++++|||++|+ .++.+++.++....+.
T Consensus 214 ~~~~~~~~~~~~~~~e~~~~~~~G~~~~~~~~~~pi~~~~g~~~g~v~~~~DITe~k~------~e~~l~~a~~~~~~~~ 287 (779)
T PRK11091 214 ETDEKVFRHNVSLTYEQWLDYPDGRKACFELRKVPFYDRVGKRHGLMGFGRDITERKR------YQDALEKASRDKTTFI 287 (779)
T ss_pred HHHHHHHhcCCCeEEEEEEEcCCCCEEEEEEEeeeEEcCCCCEEEEEEEEeehhHHHH------HHHHHHHHHHHHHHHH
Confidence 7777788888888999999999999999999999998765 88999999999996 3334444444455666
Q ss_pred hhhhhhhcc
Q 001902 610 ENVNEAVKE 618 (998)
Q Consensus 610 ~~v~e~~~e 618 (998)
.++.+.++.
T Consensus 288 a~isHelrt 296 (779)
T PRK11091 288 STISHELRT 296 (779)
T ss_pred HHhhHhhcC
Confidence 666666554
No 458
>PRK13557 histidine kinase; Provisional
Probab=99.30 E-value=1e-11 Score=150.10 Aligned_cols=115 Identities=45% Similarity=0.882 Sum_probs=104.5
Q ss_pred HHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001902 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~~ 553 (998)
|+.++++++++|+++|.++.+++|+|+|++|++++||+.+|++|+++..+.+|+........++..+..+..+..+.+.+
T Consensus 32 ~~~~~~~~~~~i~v~d~~~~~g~i~~~N~a~~~~~G~~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (540)
T PRK13557 32 FFAAVETTRMPMIVTDPNQPDNPIVFANRAFLEMTGYAAEEIIGNNCRFLQGPETDRATVAEVRDAIAERREIATEILNY 111 (540)
T ss_pred HHHHHHhCcCcEEEEcCCCCCCCEEEEcHHHHHHhCCCHHHhcCCChHhhcCCCCCHHHHHHHHHHHHcCCCceEEEEEE
Confidence 89999999999999997555666999999999999999999999999888888888888888899998888888899999
Q ss_pred ecCCcEEEEEEEEeeeccCC----EEEEEEecCCccccc
Q 001902 554 TKSGKKFWNLFHLQPMRDQK----YFIGVQLDGSEHLEP 588 (998)
Q Consensus 554 rkdG~~~wv~~~~spi~d~~----~~vgi~rDITerk~~ 588 (998)
++||+.+|+.+++.|+.+.+ +++++.+|||++++.
T Consensus 112 ~~~G~~~~~~~~~~~i~~~~g~~~~~~~~~~dit~~~~~ 150 (540)
T PRK13557 112 RKDGSSFWNALFVSPVYNDAGDLVYFFGSQLDVSRRRDA 150 (540)
T ss_pred eCCCCEEEEEEEEEEeECCCCCEEEEEEEecChHHHHHH
Confidence 99999999999999999875 788999999999863
No 459
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.29 E-value=4.1e-12 Score=134.14 Aligned_cols=211 Identities=21% Similarity=0.259 Sum_probs=148.1
Q ss_pred HHHhCCCCCccceeEEEeeC-----CeEEEEEecCCCCchhHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHC--Cc
Q 001902 718 ILDMLDHPFVPALYASFQTK-----THVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQ--GI 788 (998)
Q Consensus 718 il~~l~h~nIv~l~~~~~~~-----~~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~--~I 788 (998)
-|-++.|.|+|+++.|+.+. ..+.++.|||..|+|..+|++. -...+.....++|+.||+.||.|||+. -|
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppi 199 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPI 199 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCcc
Confidence 34556799999999988644 4588999999999999999853 234588889999999999999999998 59
Q ss_pred eeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC
Q 001902 789 IYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG 868 (998)
Q Consensus 789 iHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~ 868 (998)
+|+++..+-|++..+|-+|++--.-... .+..... .........+-++|.+||.=..
T Consensus 200 ihgnlTc~tifiq~ngLIkig~~ap~s~---h~s~~~~--------------------~~~Ek~~~~~~~g~~a~~sg~~ 256 (458)
T KOG1266|consen 200 IHGNLTCDTIFIQHNGLIKIGSVAPDST---HPSVNST--------------------REAEKSVNTSLPGFSAPESGTT 256 (458)
T ss_pred ccCCcchhheeecCCceEEecccCcccc---chhhhhh--------------------hHhhhhccccCCccccCCcCcc
Confidence 9999999999999998888753322211 1110000 0011223356789999997555
Q ss_pred CCCCChhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHH
Q 001902 869 AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ-KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 947 (998)
Q Consensus 869 ~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~e 947 (998)
...+.++|||+||....+|..|..--...... ..-..+..-.+.+. .. --.+++.+||.-.|..||+ ++.
T Consensus 257 tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~le--n~---lqr~~i~kcl~~eP~~rp~----ar~ 327 (458)
T KOG1266|consen 257 TNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIGLE--NG---LQRGSITKCLEGEPNGRPD----ARL 327 (458)
T ss_pred cccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheeecc--Cc---cccCcCcccccCCCCCCcc----hhh
Confidence 56667999999999999999876543222211 11111211111111 11 1246899999999999999 999
Q ss_pred HHcCCCccCCChh
Q 001902 948 IKKHPFFKGVNWA 960 (998)
Q Consensus 948 lL~Hp~f~~~~~~ 960 (998)
+|-||-+-.+.-.
T Consensus 328 llfHpllfeVhsl 340 (458)
T KOG1266|consen 328 LLFHPLLFEVHSL 340 (458)
T ss_pred hhcCceeeecchH
Confidence 9999998886543
No 460
>PRK10060 RNase II stability modulator; Provisional
Probab=99.29 E-value=1.6e-11 Score=151.73 Aligned_cols=158 Identities=14% Similarity=0.173 Sum_probs=124.2
Q ss_pred ccccccccccccchHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCccc-CCCCChHHHHH
Q 001902 174 MSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQ-GAGTDPEDVAK 252 (998)
Q Consensus 174 it~~~~~e~~l~~~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~-~~~~~~~~~~~ 252 (998)
+++.....+.+......++.+++.++++|+++|. +|+|+++|++|++++||+.+|++|+++..++ ++.........
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~v~~~~~~gI~i~D~---~g~I~~~N~a~~~l~Gy~~~eliG~~~~~l~~~~~~~~~~~~~ 172 (663)
T PRK10060 96 WHDTPSVARDLSHGLSFAEQVVSEANSVIVILDS---RGNIQRFNRLCEEYTGLKEHDVIGQSVFKLFMSRREAAASRRN 172 (663)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCceEEEEeC---CCCEEEEcHHHHHHHCcCHHHHcCCCHHHHhCChhhHHHHHHH
Confidence 3344444555667778889999999999999999 7779999999999999999999999986444 44444555667
Q ss_pred HHHHHHcCCcEEEEEEEEecCCCEEEEEeeeeEEeCCCC-CEEEEEEEEecchhhhHHHHHhhcCCCCCchhhhhHHHHH
Q 001902 253 IRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEG-KVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQ 331 (998)
Q Consensus 253 i~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~spi~d~~G-~v~~~v~i~~DITerk~~E~~l~~~~~~L~~~l~~~d~~~ 331 (998)
+...+..+..+.++.+.++++|..+|+..... +.+..| ...+++++.+|||++++++++++. ++.+|.++
T Consensus 173 ~~~~~~~~~~~~~e~~~~~~~G~~~~~~~~~~-~~~~~g~~~~~~i~~~~DITe~k~~e~~l~~--------~a~~D~LT 243 (663)
T PRK10060 173 IRGFFRSGNAYEVERWIKTRKGQRLFLFRNKF-VHSGSGKNEIFLICSGTDITEERRAQERLRI--------LANTDSIT 243 (663)
T ss_pred HHHHHhcCCceEEEEEEEeCCCCEEEEEeeeE-EEcCCCCceEEEEEEEEechHHHHHHHHHHH--------HhhcCccC
Confidence 77778888889999999999999998866544 444444 456788999999999999988664 56677777
Q ss_pred HHHhHhhHHHHH
Q 001902 332 KEMATSSVTELV 343 (998)
Q Consensus 332 ~~~~~~~~~~~~ 343 (998)
...++..+.+..
T Consensus 244 GL~NR~~f~~~l 255 (663)
T PRK10060 244 GLPNRNAIQELI 255 (663)
T ss_pred CCcCHHHHHHHH
Confidence 777777777643
No 461
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.28 E-value=6.5e-11 Score=136.91 Aligned_cols=237 Identities=17% Similarity=0.173 Sum_probs=156.2
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
.|.+ ...+-++.+..-.+.-+.++.+|.+..++... ........+-++-|+.++||||++++..+..++.+|||+|
T Consensus 14 pY~l-e~~~~~~~a~~~~~t~k~~~~~vsVF~~~~~~---~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTE 89 (690)
T KOG1243|consen 14 PYDL-EETAFSSEALWPDGTRKADGGPVSVFVYKRSN---GEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTE 89 (690)
T ss_pred Cccc-ccccCCCcccccccceeccCCceEEEEEeCCC---chhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEee
Confidence 3555 33333333322234556778899998887542 2344566777888999999999999999999999999999
Q ss_pred cCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 746 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH-CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH-~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
.+ ..|..+++. ++...+.--+.||+.||.||| +++++|++|.-+.|+|+..|..||++|.++........
T Consensus 90 rV--~Pl~~~lk~-----l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-- 160 (690)
T KOG1243|consen 90 RV--RPLETVLKE-----LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-- 160 (690)
T ss_pred cc--ccHHHHHHH-----hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--
Confidence 98 557777766 346666777899999999998 56899999999999999999999999998744321110
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 904 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~ 904 (998)
......---.|..|+.+.... -..|.|-|||++++++.|..+ .......
T Consensus 161 -------------------------~~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng~~~--~~~~~~~-- 209 (690)
T KOG1243|consen 161 -------------------------PAKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNGSLL--TKTDLSN-- 209 (690)
T ss_pred -------------------------ccccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCcccC--cchhhhc--
Confidence 001111122355665443322 346999999999999998332 2211100
Q ss_pred HHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc-CCCccCC
Q 001902 905 NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK-HPFFKGV 957 (998)
Q Consensus 905 ~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~-Hp~f~~~ 957 (998)
+ ..++.....+..+-+.-.+..||.....+..++. |+||+.-
T Consensus 210 ---------~--~~ipk~~~~~~~k~~~~~~~~r~n~~~~~~~~~~~~gff~n~ 252 (690)
T KOG1243|consen 210 ---------T--GKIPKALIELYCKKLGATELKRPNKLRFILECRLLGGFFRND 252 (690)
T ss_pred ---------c--CccchhHHHHHHHHhccccccccchhhHHHHHHhccccccch
Confidence 0 0112223334444455566677763334444444 8898874
No 462
>PRK13558 bacterio-opsin activator; Provisional
Probab=99.27 E-value=5e-11 Score=148.15 Aligned_cols=128 Identities=39% Similarity=0.742 Sum_probs=115.0
Q ss_pred HHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEEEEE
Q 001902 189 DIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLL 268 (998)
Q Consensus 189 ~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~ 268 (998)
+.++.+++.+++++++.|..+.+|+|+|+|+++++++||+.++++|+++..+.++.........+...+..+..+..+++
T Consensus 148 r~~~~~~~~~~~gi~~~d~~~~dg~i~~~N~~~~~l~G~~~eel~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 227 (665)
T PRK13558 148 RLKERALDEAPVGITIADATLPDEPLIYINDAFERITGYSPDEVLGRNCRFLQGEDTNEERVAELREAIDEERPTSVELR 227 (665)
T ss_pred HHHHHHHhcCCccEEEEcCCCCCCcEEEEcHHHHHHhCcCHHHHcCCCHHHhcCCCccHHHHHHHHHHHhcCCCeEEEEE
Confidence 45678999999999999865668889999999999999999999999988887777666667778888888888899999
Q ss_pred EEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHHHhhcC
Q 001902 269 NYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLR 316 (998)
Q Consensus 269 ~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~~l~~~ 316 (998)
.+++||..+|+.++..|+.+.+|.+.+++++++|||++|++|++++..
T Consensus 228 ~~~~dG~~~~~~~~~~pi~d~~G~~~~~vgi~~DITerk~~E~~L~~~ 275 (665)
T PRK13558 228 NYRKDGSTFWNQVDIAPIRDEDGTVTHYVGFQTDVTERKEAELALQRE 275 (665)
T ss_pred EECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEeCcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999987653
No 463
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.27 E-value=6.1e-11 Score=122.01 Aligned_cols=139 Identities=15% Similarity=0.123 Sum_probs=101.5
Q ss_pred ccccCCCCceeEEEEEEcc------CCeEEEEEEeeccccc-------------------ChhHHHHHH----HHHHHHH
Q 001902 670 IKPLGSGDTGSVHLVELCG------SGQYFAMKAMDKGVML-------------------NRNKVHRAC----AEREILD 720 (998)
Q Consensus 670 ~~~LG~G~~g~Vy~a~~~~------~~~~valK~i~~~~~~-------------------~~~~~~~~~----~E~~il~ 720 (998)
...||.|--+.||.|.... .+..+|+|+++..... ..+....+. .|...|.
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3568999999999998643 3579999988742110 011223333 7899999
Q ss_pred hCCC--CCccceeEEEeeCCeEEEEEecCCCCchhH-HHhhCCCCCCCHHHHHHHHHHHHHHHHHH-HHCCceeccCCCC
Q 001902 721 MLDH--PFVPALYASFQTKTHVCLITDYCPGGELFL-LLDRQPTKVLKEDAVRFYAAEVVVALEYL-HCQGIIYRDLKPE 796 (998)
Q Consensus 721 ~l~h--~nIv~l~~~~~~~~~~~lV~E~~~ggsL~~-~l~~~~~~~l~~~~~~~i~~qil~aL~~L-H~~~IiHrDLkP~ 796 (998)
++.. -+++.++.+ ..-+|||||+.++.+.. .++. ..++...+..+..+++.+|..| |+.||||+||+|.
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~ 154 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEY 154 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHH
Confidence 9854 566777754 44579999996654422 2322 2355667778889999999999 8999999999999
Q ss_pred cEEEecCCcEEEEeccCccc
Q 001902 797 NVLLQGNGHVSLTDFDLSCL 816 (998)
Q Consensus 797 NILi~~~g~vkL~DFG~a~~ 816 (998)
|||++ ++.+.|+|||.+..
T Consensus 155 NIL~~-~~~v~iIDF~qav~ 173 (197)
T cd05146 155 NMLWH-DGKVWFIDVSQSVE 173 (197)
T ss_pred HEEEE-CCcEEEEECCCcee
Confidence 99997 57899999998854
No 464
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.27 E-value=2.1e-11 Score=123.74 Aligned_cols=127 Identities=24% Similarity=0.305 Sum_probs=95.9
Q ss_pred ccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCc-cceeEEEeeCCeEEEEEecCC
Q 001902 670 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFV-PALYASFQTKTHVCLITDYCP 748 (998)
Q Consensus 670 ~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nI-v~l~~~~~~~~~~~lV~E~~~ 748 (998)
++.|+.|.++.||++.. .+..|++|+...... ....+..|..+++.+.+.++ ++++.+.. ...++||||++
T Consensus 3 ~~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~ 74 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIE 74 (170)
T ss_pred eeecCCcccCceEEEEE--CCeEEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecC
Confidence 46789999999999987 478899998765421 12245678889988865444 45555433 33579999999
Q ss_pred CCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCc-----eeccCCCCcEEEecCCcEEEEeccCcc
Q 001902 749 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGI-----IYRDLKPENVLLQGNGHVSLTDFDLSC 815 (998)
Q Consensus 749 ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~I-----iHrDLkP~NILi~~~g~vkL~DFG~a~ 815 (998)
|.++.... .. ...++.+++++|+.||..++ +|+|++|+||+++ ++.++++|||.+.
T Consensus 75 G~~l~~~~-------~~---~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 75 GSELLTED-------FS---DPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred CCcccccc-------cc---CHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 98876430 11 13456799999999999985 9999999999999 6789999999884
No 465
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.26 E-value=4.3e-11 Score=117.69 Aligned_cols=145 Identities=19% Similarity=0.198 Sum_probs=113.4
Q ss_pred cccccCCCCceeEEEEEEccCCeEEEEEEee-----cccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 669 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMD-----KGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 669 ~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~-----~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.+..|-+|+-+.|+++.+ .|+.+.||.=. .......-...+..+|+++|.++.--.|.-..-+|.+...-+|+
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ 88 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIY 88 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEE
Confidence 567788999999999987 78888888432 22223334466788899999999766666555567777777899
Q ss_pred EecCCC-CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCC---cEEEEeccCcc
Q 001902 744 TDYCPG-GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLTDFDLSC 815 (998)
Q Consensus 744 ~E~~~g-gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g---~vkL~DFG~a~ 815 (998)
|||++| .++.+++...-...........++..|-+.+.-||.++|||+||..+||++.++| .+.|+|||++.
T Consensus 89 ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 89 MEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSS 164 (229)
T ss_pred EEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchh
Confidence 999977 4788888765444455555588999999999999999999999999999998765 35899999984
No 466
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.22 E-value=9e-12 Score=143.02 Aligned_cols=254 Identities=21% Similarity=0.267 Sum_probs=186.7
Q ss_pred cccccCCcccccccCCCCceeEEEEEEc-cCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeC
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVELC-GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK 737 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~~~-~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~ 737 (998)
......+|..+..||.|.|+.|+.+.-. .++..|++|.+.........+... ..|..+...+ -|.+++..+..+...
T Consensus 260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~s-l~ev~l~~~l~~~~~~~g~~~~W~~~ 338 (524)
T KOG0601|consen 260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFS-LGEVILEAILGSHLPSVGKNSSWSQL 338 (524)
T ss_pred ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcc-hhhhhHhhHhhcccccCCCCCCcccc
Confidence 3455788999999999999999998865 678999999988776555444333 3455555555 688999988888888
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecC-CcEEEEeccCccc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCL 816 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~-g~vkL~DFG~a~~ 816 (998)
...||--|||+++++...... ...+.+...+.+..|++.++.++|++.++|+|+||+||++..+ +..+++|||.+..
T Consensus 339 r~~~ip~e~~~~~s~~l~~~~--~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~ 416 (524)
T KOG0601|consen 339 RQGYIPLEFCEGGSSSLRSVT--SQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTR 416 (524)
T ss_pred ccccCchhhhcCcchhhhhHH--HHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccc
Confidence 888899999999987655532 2347788889999999999999999999999999999999976 7889999998743
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcc--cchhhcCCCCCChhHHHHHHHHHHHHHcCCCCC
Q 001902 817 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYI--APEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 894 (998)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~--aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf 894 (998)
+.... ....+...++ ++.......+..+.|++|||..+++.++|.+.-
T Consensus 417 ~~~~~------------------------------~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls 466 (524)
T KOG0601|consen 417 LAFSS------------------------------GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLS 466 (524)
T ss_pred cceec------------------------------ccccccccccccchhhccccccccccccccccccccccccCcccC
Confidence 21111 1112333444 444445567888999999999999999987654
Q ss_pred CCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCcc
Q 001902 895 RGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 955 (998)
Q Consensus 895 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 955 (998)
....... .|..+.. +........++.+.+.++..++..|+. +.++..|.=|-
T Consensus 467 ~~~~~~~---~i~~~~~--p~~~~~~~~~q~~~kv~~~~~~~~~~l----~~~l~~~~~~~ 518 (524)
T KOG0601|consen 467 ESGVQSL---TIRSGDT--PNLPGLKLQLQVLLKVMINPDRKRRPS----AVELSLHSEFY 518 (524)
T ss_pred cccccce---eeecccc--cCCCchHHhhhhhhhhhcCCccccchh----hhhhcccchhh
Confidence 4333211 2223322 222223467888999999999999999 77777776543
No 467
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.21 E-value=1.6e-10 Score=114.60 Aligned_cols=134 Identities=21% Similarity=0.210 Sum_probs=103.8
Q ss_pred cccCCCCceeEEEEEEccCCeEEEEEEeecccccC-----hhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 671 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-----RNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~-----~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
..+++|+-+.+|.+.. -|..+++|.=.+..+-. .-...+..+|..++.++.--.|....=++.+.+...|+||
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me 79 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVME 79 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEE
Confidence 4578999999999966 45567787544332222 2224566789999999977677666666667777789999
Q ss_pred cCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccc
Q 001902 746 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 816 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~ 816 (998)
|++|..|.+++... .-.++..+-.-+.-||..||||+||.++||++..++ +.++|||++..
T Consensus 80 ~I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 80 YIEGELLKDALEEA---------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred EeCChhHHHHHHhc---------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 99999999888663 145677888889999999999999999999999654 89999999843
No 468
>TIGR00229 sensory_box PAS domain S-box. The PAS domain was previously described. This sensory box, or S-box domain occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include heme in the oxygen sensor FixL, FAD in the redox potential sensor NifL, and a 4-hydroxycinnamyl chromophore in photoactive yellow protein. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator.
Probab=99.13 E-value=6.7e-10 Score=100.93 Aligned_cols=121 Identities=20% Similarity=0.406 Sum_probs=98.0
Q ss_pred HHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcC-CcEEEE
Q 001902 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNG-QSYCGR 266 (998)
Q Consensus 188 ~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g-~~~~~e 266 (998)
++.++.+++.++++++++|. +|+|+++|+++++++|++.++++|+++..+.++.........+...+..+ .....+
T Consensus 2 ~~~~~~~~~~~~~~~~~~d~---~~~i~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (124)
T TIGR00229 2 EERYRAIFESSPDAIIVIDL---EGNILYVNPAFEEIFGYSAEELIGRNVLELIPEEDREEVRERIERLLEGEREPVSEE 78 (124)
T ss_pred chHHHHHHhhCCceEEEEcC---CCcEEEEchHHHHHhCCChHHhcCcchhhhcChhhhHHHHHHHHHHHcCCCCCcceE
Confidence 35778899999999999998 77799999999999999999999999887666655555555555555533 223445
Q ss_pred EEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHHH
Q 001902 267 LLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKD 312 (998)
Q Consensus 267 ~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~~ 312 (998)
.....++|..+|+.....|+. .+|...++++++.|||++++++++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dit~~~~~~~~ 123 (124)
T TIGR00229 79 RRVRRKDGSEIWVEVSVSPIR-TNGGELGVVGIVRDITERKQAEEA 123 (124)
T ss_pred eeeEcCCCCEEEEEEEEeehh-hCCCeeEEEEEeeehhHHHHHHhc
Confidence 555688999999999999998 778899999999999999988764
No 469
>PRK13558 bacterio-opsin activator; Provisional
Probab=99.12 E-value=4.5e-10 Score=139.63 Aligned_cols=114 Identities=41% Similarity=0.791 Sum_probs=100.6
Q ss_pred HHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001902 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~~ 553 (998)
++.+++.+++++++.|..+.++.|+++|++|++++||+.+|++|+++..+.++.........+...+..+..+..+.+.+
T Consensus 150 ~~~~~~~~~~gi~~~d~~~~dg~i~~~N~~~~~l~G~~~eel~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 229 (665)
T PRK13558 150 KERALDEAPVGITIADATLPDEPLIYINDAFERITGYSPDEVLGRNCRFLQGEDTNEERVAELREAIDEERPTSVELRNY 229 (665)
T ss_pred HHHHHhcCCccEEEEcCCCCCCcEEEEcHHHHHHhCcCHHHHcCCCHHHhcCCCccHHHHHHHHHHHhcCCCeEEEEEEE
Confidence 46789999999999986433455999999999999999999999998888887777777777888888888889999999
Q ss_pred ecCCcEEEEEEEEeeeccCC----EEEEEEecCCcccc
Q 001902 554 TKSGKKFWNLFHLQPMRDQK----YFIGVQLDGSEHLE 587 (998)
Q Consensus 554 rkdG~~~wv~~~~spi~d~~----~~vgi~rDITerk~ 587 (998)
++||+.+|+.++..|+.+.+ +++++++|||+||+
T Consensus 230 ~~dG~~~~~~~~~~pi~d~~G~~~~~vgi~~DITerk~ 267 (665)
T PRK13558 230 RKDGSTFWNQVDIAPIRDEDGTVTHYVGFQTDVTERKE 267 (665)
T ss_pred CCCCCEEEEEEEEEEEECCCCCEEEEEEEEEeCcHHHH
Confidence 99999999999999998765 78999999999997
No 470
>PRK10060 RNase II stability modulator; Provisional
Probab=99.12 E-value=5.1e-10 Score=138.40 Aligned_cols=111 Identities=17% Similarity=0.158 Sum_probs=93.0
Q ss_pred HHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccc-cCCCCCHHHHHHHHHHHhcCCcEEEEEEE
Q 001902 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFL-QGPETDPATVRKIRAAIDNQTDVTVQLIN 552 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l-~~p~~~~~~~~~i~~~l~~g~~~~~e~~~ 552 (998)
++.+++.++++|+++|.+|+ |+++|++|++++||+.+|++|+++..+ .+++........++..+..+..+..|.+.
T Consensus 113 ~~~v~~~~~~gI~i~D~~g~---I~~~N~a~~~l~Gy~~~eliG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 189 (663)
T PRK10060 113 AEQVVSEANSVIVILDSRGN---IQRFNRLCEEYTGLKEHDVIGQSVFKLFMSRREAAASRRNIRGFFRSGNAYEVERWI 189 (663)
T ss_pred HHHHHhhCCceEEEEeCCCC---EEEEcHHHHHHHCcCHHHHcCCCHHHHhCChhhHHHHHHHHHHHHhcCCceEEEEEE
Confidence 57799999999999999888 999999999999999999999996544 45555555667778888888889999999
Q ss_pred EecCCcEEEEEEEEeeeccCC----EEEEEEecCCcccc
Q 001902 553 YTKSGKKFWNLFHLQPMRDQK----YFIGVQLDGSEHLE 587 (998)
Q Consensus 553 ~rkdG~~~wv~~~~spi~d~~----~~vgi~rDITerk~ 587 (998)
.+++|+.+|+.....+..+.+ +++++.+|||++|+
T Consensus 190 ~~~~G~~~~~~~~~~~~~~~g~~~~~~i~~~~DITe~k~ 228 (663)
T PRK10060 190 KTRKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERR 228 (663)
T ss_pred EeCCCCEEEEEeeeEEEcCCCCceEEEEEEEEechHHHH
Confidence 999999999876655444333 67899999999985
No 471
>PRK11359 cyclic-di-GMP phosphodiesterase; Provisional
Probab=99.07 E-value=7.6e-10 Score=140.72 Aligned_cols=140 Identities=14% Similarity=0.202 Sum_probs=117.2
Q ss_pred cccccccccccccccccccchHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccC-CCC
Q 001902 167 SVRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQG-AGT 245 (998)
Q Consensus 167 ~~~~~~dit~~~~~e~~l~~~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~-~~~ 245 (998)
.+.+.+|||++++.+ +.++.+..+++.++++++++|. +|+|+++|+++++++||+.++++|+++..+.+ +..
T Consensus 118 ~~~~~~DiT~~~~~~----~~~~~~~~~~~~~~~~i~~~d~---~g~i~~~N~~~~~l~G~~~~e~~g~~~~~~~~~~~~ 190 (799)
T PRK11359 118 YLALVRDASVEMAQK----EQTRQLIIAVDHLDRPVIVLDP---ERRIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEF 190 (799)
T ss_pred EEEEEeeccchhhhH----HHHHHHHHHHhcCCCcEEEEcC---CCcEEEEChhhHhhhCCCHHHHCCCChHHhcCCCCC
Confidence 455668999866544 4456777899999999999998 77799999999999999999999999875543 444
Q ss_pred ChHHHHHHHHHHHcCCcEEEEEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHHHh
Q 001902 246 DPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDK 313 (998)
Q Consensus 246 ~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~~l 313 (998)
.......+...+..+..+..+++..+++|..+|+.++..|+.+.+|.+.+++++.+|||+++++++..
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~v~d~~g~~~~~~~~~~DITerk~~e~~~ 258 (799)
T PRK11359 191 PADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLE 258 (799)
T ss_pred cHHHHHHHHHhhccCCCCcceeEEeCCCCCEEEEEeeeeeeecCCCceeEEEEEeehhhhHHHHHHHH
Confidence 55556667777777777888888999999999999999999999999999999999999999887653
No 472
>TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL. NifL is a modulator of the nitrogen fixation positive regulator protein NifA, and is therefore a negative regulator. It binds NifA. NifA and NifL are encoded by adjacent genes.
Probab=99.06 E-value=3.4e-10 Score=134.91 Aligned_cols=111 Identities=25% Similarity=0.447 Sum_probs=99.6
Q ss_pred HHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001902 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~~ 553 (998)
|+.++++++++++++|.+|+ ++++|++|++++||++++++|++...+.++.........+...+..+..+..+...+
T Consensus 6 ~~~i~~~~~~~i~~~d~~g~---~~~~N~~~~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (494)
T TIGR02938 6 YRQTVDQAPLAISITDLKAN---ILYANDAFTRITGYTKEEIIGKNESVLSNHTTPPEVYQALWGSLAEQKPWAGKLLNR 82 (494)
T ss_pred HHHHHHhCCceEEEECCCCc---EEEEchhheeecCCCHHHHhCCCchhhcCCCCCHHHHHHHHHHHHhCCcccceeecc
Confidence 78899999999999999888 999999999999999999999987777777666777777888888888888888889
Q ss_pred ecCCcEEEEEEEEeeeccCC----EEEEEEecCCcccc
Q 001902 554 TKSGKKFWNLFHLQPMRDQK----YFIGVQLDGSEHLE 587 (998)
Q Consensus 554 rkdG~~~wv~~~~spi~d~~----~~vgi~rDITerk~ 587 (998)
+++|+.+|+.+++.|+.+.+ +++++++|||++|+
T Consensus 83 ~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DIt~~k~ 120 (494)
T TIGR02938 83 RKDGELYLAELTVAPVLNEAGETTHFLGMHRDITELHR 120 (494)
T ss_pred CCCccchhhheeeEEEECCCCCEEEEEEehhhhhHHHH
Confidence 99999999999999998765 88999999999986
No 473
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.02 E-value=1.7e-09 Score=114.64 Aligned_cols=140 Identities=23% Similarity=0.305 Sum_probs=107.3
Q ss_pred cccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCC--CCccceeEEEeeC---CeEEEEEe
Q 001902 671 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH--PFVPALYASFQTK---THVCLITD 745 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h--~nIv~l~~~~~~~---~~~~lV~E 745 (998)
+.|+.|.++.||++... +|+.+++|+....... .....+..|..+++.+.+ ..+++++.+.... +..++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEec-CCcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 56899999999999874 3689999987654221 134567889999999965 4467777776653 36789999
Q ss_pred cCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH----------------------------------------
Q 001902 746 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC---------------------------------------- 785 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~---------------------------------------- 785 (998)
|++|.++.+.+.. ..++......++.++++.|.+||+
T Consensus 81 ~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 81 RVDGRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred EeCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 9999988776532 236777777788888888888883
Q ss_pred ----------------CCceeccCCCCcEEEec--CCcEEEEeccCccc
Q 001902 786 ----------------QGIIYRDLKPENVLLQG--NGHVSLTDFDLSCL 816 (998)
Q Consensus 786 ----------------~~IiHrDLkP~NILi~~--~g~vkL~DFG~a~~ 816 (998)
..++|+|++|+||+++. ++.+.|+||+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 23699999999999998 66789999998843
No 474
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.01 E-value=1e-08 Score=115.09 Aligned_cols=214 Identities=16% Similarity=0.208 Sum_probs=150.3
Q ss_pred ceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEe----eCCeEEEEEecCCC-Cch
Q 001902 678 TGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ----TKTHVCLITDYCPG-GEL 752 (998)
Q Consensus 678 ~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~----~~~~~~lV~E~~~g-gsL 752 (998)
..+.|+|....+|..|++|.++........ ....-.++++++.|.|||++.++|. .+..+++|++|.++ ++|
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~n---k~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL 365 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTN---KDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTL 365 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcc---cchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchH
Confidence 357899999999999999999543222221 1223467899999999999999886 34578999999986 467
Q ss_pred hHHHhhC-------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCC
Q 001902 753 FLLLDRQ-------------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 753 ~~~l~~~-------------~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 819 (998)
.++.-.. .+...++..+|.++.||..||.++|+.|+..+-|.|.+||++.+.+++|...|+......
T Consensus 366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 7654321 233578899999999999999999999999999999999999988999988887643321
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCC-
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT- 898 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~- 898 (998)
++ . +.+.+ -.+-|.=.||.++..|.||..--...+
T Consensus 446 d~---------------------------------------~--~~le~---~Qq~D~~~lG~ll~aLAt~~~ns~~~d~ 481 (655)
T KOG3741|consen 446 DP---------------------------------------T--EPLES---QQQNDLRDLGLLLLALATGTENSNRTDS 481 (655)
T ss_pred CC---------------------------------------C--cchhH---HhhhhHHHHHHHHHHHhhcccccccccc
Confidence 11 0 11111 235789999999999999964422211
Q ss_pred hHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 899 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 899 ~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
........+. ...|.+++++|..+...++++ -+ +.+++.|
T Consensus 482 ~~~s~~~~I~--------~~yS~D~rn~v~yl~s~~~~~-ks----I~~llp~ 521 (655)
T KOG3741|consen 482 TQSSHLTRIT--------TTYSTDLRNVVEYLESLNFRE-KS----IQDLLPM 521 (655)
T ss_pred hHHHHHHHhh--------hhhhHHHHHHHHHHHhcCccc-cc----HHHHHHH
Confidence 1122111111 125677888888888888874 33 5555543
No 475
>PF08447 PAS_3: PAS fold; InterPro: IPR013655 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. The PAS domain contains a sensory box, or S-box domain that occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include haem in the oxygen sensor FixL [], FAD in the redox potential sensor NifL [], and a 4-hydroxycinnamyl chromophore in photoactive yellow protein []. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator. This domain has been found in the gene product of the madA gene of the filamentous zygomycete fungus Phycomyces blakesleeanus. It has been shown that MadA encodes a blue-light photoreceptor for phototropism and other light responses. The gene is involved in the phototropic responses associated with sporangiophore growth; they exhibit phototropism by bending toward near-UV and blue wavelengths and away from far-UV wavelengths in a manner that is physiologically similar to plant phototropic responses [].; GO: 0005515 protein binding; PDB: 3NJA_D 3H9W_A 3GDI_B 3ICY_A 3EEH_A 3MR0_B.
Probab=98.97 E-value=2.9e-09 Score=95.94 Aligned_cols=86 Identities=28% Similarity=0.453 Sum_probs=73.7
Q ss_pred eEEccHHHHHHcCCChhhhcCCC----CCcccCCCCChHHHHHHHH-HHHcCCcEEEEEEEEecCCCEEEEEeeeeEEeC
Q 001902 214 IMYASAGFFKMTGYTSKEVVGRN----CRFLQGAGTDPEDVAKIRE-TLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKD 288 (998)
Q Consensus 214 I~~vN~a~~~l~Gys~eEliG~~----~~~l~~~~~~~~~~~~i~~-~l~~g~~~~~e~~~~~kdG~~~w~~~~~spi~d 288 (998)
|+|+|+++++++||+++++ |.. +..+++|++.......+.. .+..+..+..+++++++||+.+|++.+..+++|
T Consensus 1 ~i~~s~~~~~i~G~~~~~~-~~~~~~~~~~~ihpdD~~~~~~~~~~~~~~~~~~~~~e~R~~~~~G~~~wi~~~~~~~~d 79 (91)
T PF08447_consen 1 IIYWSDNFYEIFGYSPEEI-GKPDFEEWLERIHPDDRERVRQAIQQAALQNGEPFEIEYRIRRKDGEYRWIEVRGRPIFD 79 (91)
T ss_dssp -EEE-THHHHHHTS-HHHH-TCBEHHHHHHHB-TTTHHHHHHHHHHHHHHTT-EEEEEEEEEGTTSTEEEEEEEEEEEET
T ss_pred CEEEeHHHHHHhCCCHHHh-ccCCHHHHHhhcCHHHHHHHHHHHHHHhhccCcceEEEEEEECCCCCEEEEEEEEEEEEC
Confidence 6899999999999999999 766 5678899999888899988 788888999999999999999999999999999
Q ss_pred CCCCEEEEEEEE
Q 001902 289 DEGKVLKFIGMQ 300 (998)
Q Consensus 289 ~~G~v~~~v~i~ 300 (998)
++|++..++|++
T Consensus 80 ~~g~~~~~~Gv~ 91 (91)
T PF08447_consen 80 ENGKPIRIIGVI 91 (91)
T ss_dssp TTS-EEEEEEEE
T ss_pred CCCCEEEEEEEC
Confidence 999999999874
No 476
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.89 E-value=2.4e-08 Score=108.64 Aligned_cols=134 Identities=19% Similarity=0.064 Sum_probs=96.1
Q ss_pred eEEEEEEccCCeEEEEEEeecccccC--------hhHHHHHHHHHHHHHhCCCCCc--cceeEEEee-----CCeEEEEE
Q 001902 680 SVHLVELCGSGQYFAMKAMDKGVMLN--------RNKVHRACAEREILDMLDHPFV--PALYASFQT-----KTHVCLIT 744 (998)
Q Consensus 680 ~Vy~a~~~~~~~~valK~i~~~~~~~--------~~~~~~~~~E~~il~~l~h~nI--v~l~~~~~~-----~~~~~lV~ 744 (998)
.|+.+.. .|+.|.+|......... ........+|...+.+|..-+| +.+..++.. ....+|||
T Consensus 37 rvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVt 114 (268)
T PRK15123 37 RTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIIT 114 (268)
T ss_pred eEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEE
Confidence 4666654 57789999764322100 0111246788888888854444 344555542 23578999
Q ss_pred ecCCCC-chhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec-------CCcEEEEeccCcc
Q 001902 745 DYCPGG-ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-------NGHVSLTDFDLSC 815 (998)
Q Consensus 745 E~~~gg-sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~-------~g~vkL~DFG~a~ 815 (998)
|++++. +|.+++........+......++.+++..+.-||.+||+|+|++++|||++. ++.+.|+||+.+.
T Consensus 115 e~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 115 EDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred eeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 999876 8999886432234566778899999999999999999999999999999985 4689999999874
No 477
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.89 E-value=1.9e-08 Score=103.29 Aligned_cols=127 Identities=24% Similarity=0.202 Sum_probs=83.3
Q ss_pred eEEEEEEccCCeEEEEEEeeccccc----------------------C-hhHHHHHHHHHHHHHhCCCC--CccceeEEE
Q 001902 680 SVHLVELCGSGQYFAMKAMDKGVML----------------------N-RNKVHRACAEREILDMLDHP--FVPALYASF 734 (998)
Q Consensus 680 ~Vy~a~~~~~~~~valK~i~~~~~~----------------------~-~~~~~~~~~E~~il~~l~h~--nIv~l~~~~ 734 (998)
.||.|.. ..|..+|+|+.+..... . ........+|.+.|.++..- ++++++.+.
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 3888887 56889999988742110 0 11133456799999999765 567776442
Q ss_pred eeCCeEEEEEecCC--CCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHH-HHHCCceeccCCCCcEEEecCCcEEEEec
Q 001902 735 QTKTHVCLITDYCP--GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEY-LHCQGIIYRDLKPENVLLQGNGHVSLTDF 811 (998)
Q Consensus 735 ~~~~~~~lV~E~~~--ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~-LH~~~IiHrDLkP~NILi~~~g~vkL~DF 811 (998)
. -+|||||++ |..+..+.... ++......++.+++..+.. +|..||||+||.+.|||++.+ .+.|+||
T Consensus 80 --~--~~ivME~I~~~G~~~~~l~~~~----~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf 150 (188)
T PF01163_consen 80 --R--NVIVMEYIGEDGVPLPRLKDVD----LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDF 150 (188)
T ss_dssp --T--TEEEEE--EETTEEGGCHHHCG----GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--G
T ss_pred --C--CEEEEEecCCCccchhhHHhcc----ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEec
Confidence 2 369999998 65665544332 2245567778888885555 579999999999999999976 9999999
Q ss_pred cCccc
Q 001902 812 DLSCL 816 (998)
Q Consensus 812 G~a~~ 816 (998)
|.+..
T Consensus 151 ~qav~ 155 (188)
T PF01163_consen 151 GQAVD 155 (188)
T ss_dssp TTEEE
T ss_pred Cccee
Confidence 98844
No 478
>TIGR00229 sensory_box PAS domain S-box. The PAS domain was previously described. This sensory box, or S-box domain occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include heme in the oxygen sensor FixL, FAD in the redox potential sensor NifL, and a 4-hydroxycinnamyl chromophore in photoactive yellow protein. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator.
Probab=98.89 E-value=1.5e-08 Score=91.95 Aligned_cols=111 Identities=22% Similarity=0.354 Sum_probs=90.0
Q ss_pred HHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcC-CcEEEEEEE
Q 001902 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQ-TDVTVQLIN 552 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g-~~~~~e~~~ 552 (998)
++.+++.++++++++|.+|. ++++|+++++++|++.++++|++...+.++.........+...+..+ .....+...
T Consensus 5 ~~~~~~~~~~~~~~~d~~~~---i~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (124)
T TIGR00229 5 YRAIFESSPDAIIVIDLEGN---ILYVNPAFEEIFGYSAEELIGRNVLELIPEEDREEVRERIERLLEGEREPVSEERRV 81 (124)
T ss_pred HHHHHhhCCceEEEEcCCCc---EEEEchHHHHHhCCChHHhcCcchhhhcChhhhHHHHHHHHHHHcCCCCCcceEeee
Confidence 67899999999999999777 99999999999999999999999777777766665555566665533 224445555
Q ss_pred EecCCcEEEEEEEEeeec-cCC--EEEEEEecCCcccc
Q 001902 553 YTKSGKKFWNLFHLQPMR-DQK--YFIGVQLDGSEHLE 587 (998)
Q Consensus 553 ~rkdG~~~wv~~~~spi~-d~~--~~vgi~rDITerk~ 587 (998)
..++|..+|+.++..|+. +.. ++++++.|||++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dit~~~~ 119 (124)
T TIGR00229 82 RRKDGSEIWVEVSVSPIRTNGGELGVVGIVRDITERKQ 119 (124)
T ss_pred EcCCCCEEEEEEEEeehhhCCCeeEEEEEeeehhHHHH
Confidence 689999999999999988 233 88899999999986
No 479
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.85 E-value=1.5e-09 Score=126.40 Aligned_cols=171 Identities=19% Similarity=0.323 Sum_probs=125.9
Q ss_pred HHHHHHHHHHHHC-CceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccc
Q 001902 774 AEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASN 852 (998)
Q Consensus 774 ~qil~aL~~LH~~-~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (998)
.+.+.||.|+|.. ++||+.|.|++|.++.+|..||+.|+++........ +|- .........
T Consensus 106 ~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~--~p~----------------~~yd~~lp~ 167 (700)
T KOG2137|consen 106 GNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTE--YPF----------------SEYDPPLPL 167 (700)
T ss_pred hcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCc--ccc----------------ccCCCCCCh
Confidence 4555999999965 999999999999999999999999998754332111 110 011112223
Q ss_pred cccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHH-cCCCCCCCCChHHHHHHHHh-CC-CCCCCCCCCcHHHHHHHHH
Q 001902 853 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML-YGYTPFRGKTRQKTFANILH-KD-LKFPSSTPTSLHAKQLMYR 929 (998)
Q Consensus 853 ~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLl-tG~~Pf~~~~~~~~~~~i~~-~~-~~~~~~~~~s~~l~~Ll~~ 929 (998)
...-...|.|||++.....+.++|+||+||++|.+. .|+.-+........+..-.. .+ -.+.....++.++++=|.+
T Consensus 168 ~~~~~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k 247 (700)
T KOG2137|consen 168 LLQPHLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRESLKK 247 (700)
T ss_pred hhccCcccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHHHHHH
Confidence 345677899999999988899999999999999999 56666655443333322111 11 1222335678899999999
Q ss_pred ccccCccCcCCChhcHHHHHcCCCccCCChhhhhcCC
Q 001902 930 LLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMN 966 (998)
Q Consensus 930 ~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~ 966 (998)
+|..++.-||+ +..++..|||....-..++.++
T Consensus 248 ~l~~~~~~rp~----~~~l~~~~ff~D~~~~aLrfLD 280 (700)
T KOG2137|consen 248 LLNGDSAVRPT----LDLLLSIPFFSDPGLKALRFLD 280 (700)
T ss_pred HhcCCcccCcc----hhhhhcccccCCchhhhhhhcc
Confidence 99999999999 9999999999998888887754
No 480
>PRK11073 glnL nitrogen regulation protein NR(II); Provisional
Probab=98.83 E-value=1.3e-08 Score=116.20 Aligned_cols=108 Identities=12% Similarity=0.131 Sum_probs=88.7
Q ss_pred HHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001902 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~~ 553 (998)
++.+++++++|++++|.+|. |+++|++|++++||+.++++|+++..+.+... .....+...+..+..+..+....
T Consensus 9 ~~~il~~~~~gi~~~d~~~~---i~~~N~a~~~~~g~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 83 (348)
T PRK11073 9 AGQILNSLINSILLLDDDLA---IHYANPAAQQLLAQSSRKLFGTPLPELLSYFS--LNIELMRESLQAGQGFTDNEVTL 83 (348)
T ss_pred HHHHHhcCcCeEEEECCCCe---EeeEcHHHHHHhCCCHHHHcCCCHHHHcCcch--hhHHHHHHHHHcCCcccccceEE
Confidence 68899999999999999777 99999999999999999999999877765432 22344556666666655555666
Q ss_pred ecCCcEEEEEEEEeeeccCCEEEEEEecCCcccc
Q 001902 554 TKSGKKFWNLFHLQPMRDQKYFIGVQLDGSEHLE 587 (998)
Q Consensus 554 rkdG~~~wv~~~~spi~d~~~~vgi~rDITerk~ 587 (998)
.+||+.+|+.++.+|+. ..+++..++|||++++
T Consensus 84 ~~~g~~~~~~~~~~~~~-~~~~~~~~~dit~~~~ 116 (348)
T PRK11073 84 VIDGRSHILSLTAQRLP-EGMILLEMAPMDNQRR 116 (348)
T ss_pred EECCceEEEEEEEEEcc-CceeEEEEechhHHHH
Confidence 78999999999999998 3477888999999885
No 481
>PF08447 PAS_3: PAS fold; InterPro: IPR013655 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. The PAS domain contains a sensory box, or S-box domain that occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include haem in the oxygen sensor FixL [], FAD in the redox potential sensor NifL [], and a 4-hydroxycinnamyl chromophore in photoactive yellow protein []. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator. This domain has been found in the gene product of the madA gene of the filamentous zygomycete fungus Phycomyces blakesleeanus. It has been shown that MadA encodes a blue-light photoreceptor for phototropism and other light responses. The gene is involved in the phototropic responses associated with sporangiophore growth; they exhibit phototropism by bending toward near-UV and blue wavelengths and away from far-UV wavelengths in a manner that is physiologically similar to plant phototropic responses [].; GO: 0005515 protein binding; PDB: 3NJA_D 3H9W_A 3GDI_B 3ICY_A 3EEH_A 3MR0_B.
Probab=98.80 E-value=1.9e-08 Score=90.52 Aligned_cols=82 Identities=29% Similarity=0.411 Sum_probs=69.4
Q ss_pred EEEcCHHHHHHcCCChhhhcCCC----CccccCCCCCHHHHHHHHH-HHhcCCcEEEEEEEEecCCcEEEEEEEEeeecc
Q 001902 497 IIFASDSFLELTEYSREEILGRN----CRFLQGPETDPATVRKIRA-AIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRD 571 (998)
Q Consensus 497 I~~vN~a~~~l~Gy~~eEliG~~----~~~l~~p~~~~~~~~~i~~-~l~~g~~~~~e~~~~rkdG~~~wv~~~~spi~d 571 (998)
|+|||++|++|+||+++++ |.. +..++||++...+.+.+.. .+..+..+..+++++++||+.+|++.+..++.|
T Consensus 1 ~i~~s~~~~~i~G~~~~~~-~~~~~~~~~~~ihpdD~~~~~~~~~~~~~~~~~~~~~e~R~~~~~G~~~wi~~~~~~~~d 79 (91)
T PF08447_consen 1 IIYWSDNFYEIFGYSPEEI-GKPDFEEWLERIHPDDRERVRQAIQQAALQNGEPFEIEYRIRRKDGEYRWIEVRGRPIFD 79 (91)
T ss_dssp -EEE-THHHHHHTS-HHHH-TCBEHHHHHHHB-TTTHHHHHHHHHHHHHHTT-EEEEEEEEEGTTSTEEEEEEEEEEEET
T ss_pred CEEEeHHHHHHhCCCHHHh-ccCCHHHHHhhcCHHHHHHHHHHHHHHhhccCcceEEEEEEECCCCCEEEEEEEEEEEEC
Confidence 6899999999999999999 766 6778899999999999999 788888999999999999999999999999997
Q ss_pred CC----EEEEEE
Q 001902 572 QK----YFIGVQ 579 (998)
Q Consensus 572 ~~----~~vgi~ 579 (998)
.+ .++|+.
T Consensus 80 ~~g~~~~~~Gv~ 91 (91)
T PF08447_consen 80 ENGKPIRIIGVI 91 (91)
T ss_dssp TTS-EEEEEEEE
T ss_pred CCCCEEEEEEEC
Confidence 76 667663
No 482
>COG3829 RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]
Probab=98.78 E-value=6.4e-08 Score=110.42 Aligned_cols=218 Identities=17% Similarity=0.162 Sum_probs=150.4
Q ss_pred HHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEEEEEEEe
Q 001902 192 KDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYK 271 (998)
Q Consensus 192 ~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~ 271 (998)
+.+++++.++++++|. ...|.++|..+..+++-....++|+++..+.+...-+.. . .+..+........
T Consensus 4 ~~~l~~~~~~~~vi~~---~~~~~~~~~~a~~~~~~~~~~~i~~~~~~i~~~~~~~~v-------~-~~~~~~~~~~~~~ 72 (560)
T COG3829 4 EGILKSILDGPVVIDK---NTGIDVANALALAKRQKNAEAVIGRPLREILETLGMERV-------E-QSRDKELTERLKL 72 (560)
T ss_pred hhhhhhcccceEEEEc---CCceeeechHHHHhhhcceEEEecccceeeccccCccee-------e-ccCccceeeeeec
Confidence 4489999999999998 445999999999999999999999998877665433211 1 2222222233333
Q ss_pred cCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHHHhhcCCCCCchhhhhHHHHHHHHhHhhHHHHHHHccCCCC
Q 001902 272 KDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPRS 351 (998)
Q Consensus 272 kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~~l~~~~~~L~~~l~~~d~~~~~~~~~~~~~~~~~l~~~~~ 351 (998)
+ + ...+ +..-++.++.|+++|++.++.|+++..+.-++.
T Consensus 73 ~-~-~~~~-~~~~~~~~~~~~~~g~~~~~~~~~e~~~~~~~~-------------------------------------- 111 (560)
T COG3829 73 K-V-KRIV-VVGKTPVDEQGRVVGVLEVFLDISEALELIEEN-------------------------------------- 111 (560)
T ss_pred c-c-eeEE-EcCCceeecCCceeeeehhhhhhHHHHHHHHHH--------------------------------------
Confidence 3 3 2223 334445677889999999999999854433321
Q ss_pred ccccCCCCcccccCCCCchhhhcccccCCCCCCCCCCCCCCCCCCcccccccccccchhhccccCCccccccccccccCC
Q 001902 352 LSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQKSGRRSFMGLIGRKSQST 431 (998)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (998)
T Consensus 112 -------------------------------------------------------------------------------- 111 (560)
T COG3829 112 -------------------------------------------------------------------------------- 111 (560)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCccccccccCCCCCCCCCCCCCchhhHHHHHhhhccccHHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCC
Q 001902 432 DDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYS 511 (998)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~di~er~~~e~e~r~~~~l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~ 511 (998)
+...++. |+.+++.+.++++++|.+|+ ++++|++...++|++
T Consensus 112 ------------------------------l~~~~~~-----l~~il~~~~~~l~vvD~~G~---~i~~N~~~~~~~gl~ 153 (560)
T COG3829 112 ------------------------------LRQLRQR-----LEAILDSIDDGLLVVDEDGI---IIYYNKAYAKLLGLS 153 (560)
T ss_pred ------------------------------HHHHHHH-----HHHHHhhccCceEEEcCCCc---EEEEcHHHHHHhCCC
Confidence 0001111 78899999999999999888 999999999999999
Q ss_pred hhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCcEEEEEEEEeeeccCC---EEEEEEecCCcccc
Q 001902 512 REEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQK---YFIGVQLDGSEHLE 587 (998)
Q Consensus 512 ~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~~rkdG~~~wv~~~~spi~d~~---~~vgi~rDITerk~ 587 (998)
.++++|++..++.....+ ....+.+..+++.......+..++. -.+..|+..++ +.+++++|+++-+.
T Consensus 154 ~e~~~gk~~~~v~~~~~~----s~~l~vl~~~kp~~~~~~~~~~~~~----i~~~~pv~~~g~l~G~v~~~~~~~~l~~ 224 (560)
T COG3829 154 PEEVLGKHLLDVVSAGED----STLLEVLRTGKPIRDVVQTYNGNKI----IVNVAPVYADGQLIGVVGISKDVSELER 224 (560)
T ss_pred HHHHcCCcHHHHHhccCC----ceehhhhhcCCcceeeeeeecCCce----eEeeccEecCCcEEEEEEeecchHHHHH
Confidence 999999997666511111 1234567777765444433333332 34566777665 88999999988763
No 483
>cd00130 PAS PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in signal transduction.
Probab=98.78 E-value=1.4e-07 Score=81.10 Aligned_cols=103 Identities=24% Similarity=0.479 Sum_probs=87.1
Q ss_pred cCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCCEE
Q 001902 198 FQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPF 277 (998)
Q Consensus 198 ~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~ 277 (998)
++++++++|. +|.++++|+++++++|++.++++|+++..+.++.........+...+..+.....++.....+|...
T Consensus 1 ~~~~i~~~d~---~~~~~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (103)
T cd00130 1 LPDGVIVLDL---DGRILYANPAAEQLLGYSPEELIGKSLLDLIHPEDREELRERLENLLSGGEPVTLEVRLRRKDGSVI 77 (103)
T ss_pred CCceEEEECC---CCcEEEECHHHHHHhCCCHHHHcCccHHHhcCCccchHHHHHHHHHHhcCcCeEEEEEEEccCCCEE
Confidence 3678999998 7779999999999999999999999987777776666666666666666666778888888899999
Q ss_pred EEEeeeeEEeCCCCCEEEEEEEEecc
Q 001902 278 WNLLTIAPIKDDEGKVLKFIGMQVEV 303 (998)
Q Consensus 278 w~~~~~spi~d~~G~v~~~v~i~~DI 303 (998)
|+.....++.+..|...+++++.+||
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~di 103 (103)
T cd00130 78 WVLVSLTPIRDEGGEVIGLLGVVRDI 103 (103)
T ss_pred EEEEEEEEEecCCCCEEEEEEEEecC
Confidence 99999999998888999999999886
No 484
>PRK11360 sensory histidine kinase AtoS; Provisional
Probab=98.71 E-value=1.9e-07 Score=114.23 Aligned_cols=128 Identities=13% Similarity=0.124 Sum_probs=106.2
Q ss_pred ccccchHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCC
Q 001902 182 KGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ 261 (998)
Q Consensus 182 ~~l~~~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~ 261 (998)
..+..++..++.+++.++++++++|. +|+|+++|+++++++||+.++++|+++..++++.. .....+...+..+.
T Consensus 255 ~~l~~~~~~~~~i~~~~~~~i~~~d~---~g~i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~ 329 (607)
T PRK11360 255 QALRETRSLNELILESIADGVIAIDR---QGKITTMNPAAEVITGLQRHELVGKPYSELFPPNT--PFASPLLDTLEHGT 329 (607)
T ss_pred HHHHHHHHHHHHHHHhccCeEEEEcC---CCCEEEECHHHHHHhCCChHHhcCCcHHHHcCCch--hHHHHHHHHHhcCC
Confidence 45667778899999999999999998 77799999999999999999999999887776542 23345555666554
Q ss_pred c-EEEEEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHHHhhc
Q 001902 262 S-YCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (998)
Q Consensus 262 ~-~~~e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~~l~~ 315 (998)
. ...+....+++|... +.++..|+.+.+|.+.+++++++|||+++++|++++.
T Consensus 330 ~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~g~~~~~i~~~~Dite~~~~e~~l~~ 383 (607)
T PRK11360 330 EHVDLEISFPGRDRTIE-LSVSTSLLHNTHGEMIGALVIFSDLTERKRLQRRVAR 383 (607)
T ss_pred CccceEEEEEcCCCcEE-EEEEEeeEEcCCCCEEEEEEEEeechHHHHHHHHHHH
Confidence 4 335667778888876 8899999999999999999999999999999988654
No 485
>PRK11073 glnL nitrogen regulation protein NR(II); Provisional
Probab=98.70 E-value=1.2e-07 Score=108.12 Aligned_cols=118 Identities=17% Similarity=0.212 Sum_probs=93.1
Q ss_pred hHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEEE
Q 001902 187 VSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGR 266 (998)
Q Consensus 187 ~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e 266 (998)
+...++.+++++++|++++|. +|+|+++|+++++++||+.++++|+++..+.+... .....+...+..+..+...
T Consensus 5 ~~~~~~~il~~~~~gi~~~d~---~~~i~~~N~a~~~~~g~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 79 (348)
T PRK11073 5 TLPDAGQILNSLINSILLLDD---DLAIHYANPAAQQLLAQSSRKLFGTPLPELLSYFS--LNIELMRESLQAGQGFTDN 79 (348)
T ss_pred CcchHHHHHhcCcCeEEEECC---CCeEeeEcHHHHHHhCCCHHHHcCCCHHHHcCcch--hhHHHHHHHHHcCCccccc
Confidence 345678999999999999998 77899999999999999999999999887765432 2234455666666655544
Q ss_pred EEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHHHhh
Q 001902 267 LLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (998)
Q Consensus 267 ~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~~l~ 314 (998)
...+.+||..+|+.++.+|+. . .+++..++|||+++++++++.
T Consensus 80 ~~~~~~~g~~~~~~~~~~~~~--~---~~~~~~~~dit~~~~~~~~~~ 122 (348)
T PRK11073 80 EVTLVIDGRSHILSLTAQRLP--E---GMILLEMAPMDNQRRLSQEQL 122 (348)
T ss_pred ceEEEECCceEEEEEEEEEcc--C---ceeEEEEechhHHHHHHHHHH
Confidence 455678999999999999986 2 246778999999998877654
No 486
>TIGR02966 phoR_proteo phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154).
Probab=98.68 E-value=1e-07 Score=107.36 Aligned_cols=113 Identities=14% Similarity=0.114 Sum_probs=88.7
Q ss_pred cchHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcEE
Q 001902 185 PRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYC 264 (998)
Q Consensus 185 ~~~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~ 264 (998)
....+.|+.+++++++||+++|. +|+|+++|++|++++||+.++++|+++..+..+. .+...+..+.. .
T Consensus 2 ~~~~~~l~~~~~~~~~~i~~~d~---~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~-------~~~~~l~~~~~-~ 70 (333)
T TIGR02966 2 SALLSRFRAAAQALPDAVVVLDE---EGQIEWCNPAAERLLGLRWPDDLGQRITNLIRHP-------EFVEYLAAGRF-S 70 (333)
T ss_pred hhHHHHHHHHHHhCcCcEEEECC---CCcEEEEcHHHHHHhCCChHHHcCCcHHHHccCH-------HHHHHHHhccc-C
Confidence 45668899999999999999999 7779999999999999999999999987665431 23333443332 2
Q ss_pred EEEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHHHh
Q 001902 265 GRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDK 313 (998)
Q Consensus 265 ~e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~~l 313 (998)
.......++|..+|+.+.+.|+.+.+ ++++++|||++++.++..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~p~~~~~-----~~~~~~dit~~~~~~~~~ 114 (333)
T TIGR02966 71 EPLELPSPINSERVLEIRIAPYGEEQ-----KLLVARDVTRLRRLEQMR 114 (333)
T ss_pred CCeEeecCCCCceEEEEEEEEcCCCc-----eEEEEeCchHHHHHHHHH
Confidence 23455568899999999999987542 678899999999887653
No 487
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.68 E-value=1.1e-07 Score=100.05 Aligned_cols=136 Identities=21% Similarity=0.186 Sum_probs=101.5
Q ss_pred cccccccCCCCceeEEEEEEccCCeEEEEEEeecccccC-------------------hhHHHHHHHHHHHHHhCCCC--
Q 001902 667 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-------------------RNKVHRACAEREILDMLDHP-- 725 (998)
Q Consensus 667 y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~-------------------~~~~~~~~~E~~il~~l~h~-- 725 (998)
+.+..+||-|.-|.||.|.+. .|.++|+|.-+.....- ........+|.++|..|...
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 345578999999999999984 68999999765321100 11133456789999999665
Q ss_pred CccceeEEEeeCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCc
Q 001902 726 FVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 805 (998)
Q Consensus 726 nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~ 805 (998)
.|++.+++ +.-++||||++|-.|...- +.......++..|+.-+.-+-..||||+|+.+=||+++++|.
T Consensus 172 ~VP~P~~~----nRHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~ 240 (304)
T COG0478 172 KVPKPIAW----NRHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGD 240 (304)
T ss_pred CCCCcccc----ccceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCC
Confidence 77777754 3457999999887776543 234445566666777666666899999999999999999999
Q ss_pred EEEEeccCc
Q 001902 806 VSLTDFDLS 814 (998)
Q Consensus 806 vkL~DFG~a 814 (998)
+.++||--+
T Consensus 241 ~~vIDwPQ~ 249 (304)
T COG0478 241 IVVIDWPQA 249 (304)
T ss_pred EEEEeCccc
Confidence 999999866
No 488
>TIGR02966 phoR_proteo phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154).
Probab=98.68 E-value=1e-07 Score=107.39 Aligned_cols=102 Identities=11% Similarity=0.031 Sum_probs=82.5
Q ss_pred HHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001902 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~~ 553 (998)
|+.+++++++||+++|.+|. |+++|++|+++|||++++++|++...+..++ .++..+..+.. .......
T Consensus 8 l~~~~~~~~~~i~~~d~~g~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~-------~~~~~l~~~~~-~~~~~~~ 76 (333)
T TIGR02966 8 FRAAAQALPDAVVVLDEEGQ---IEWCNPAAERLLGLRWPDDLGQRITNLIRHP-------EFVEYLAAGRF-SEPLELP 76 (333)
T ss_pred HHHHHHhCcCcEEEECCCCc---EEEEcHHHHHHhCCChHHHcCCcHHHHccCH-------HHHHHHHhccc-CCCeEee
Confidence 78899999999999999888 9999999999999999999999977665532 23333433332 2335566
Q ss_pred ecCCcEEEEEEEEeeeccCCEEEEEEecCCcccc
Q 001902 554 TKSGKKFWNLFHLQPMRDQKYFIGVQLDGSEHLE 587 (998)
Q Consensus 554 rkdG~~~wv~~~~spi~d~~~~vgi~rDITerk~ 587 (998)
.++|..+|+.++++|+.+.+ ++++++|||++++
T Consensus 77 ~~~~~~~~~~~~~~p~~~~~-~~~~~~dit~~~~ 109 (333)
T TIGR02966 77 SPINSERVLEIRIAPYGEEQ-KLLVARDVTRLRR 109 (333)
T ss_pred cCCCCceEEEEEEEEcCCCc-eEEEEeCchHHHH
Confidence 68999999999999998765 8888999999875
No 489
>KOG0501 consensus K+-channel KCNQ [Inorganic ion transport and metabolism]
Probab=98.67 E-value=1.3e-07 Score=105.99 Aligned_cols=119 Identities=26% Similarity=0.606 Sum_probs=101.9
Q ss_pred HHHHHhhcC--c-eEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCC--CccccCCCCCHHHHHHHHHHHhcCCcEEE
Q 001902 474 LATTLERIE--K-NFVITDPRLPDNPIIFASDSFLELTEYSREEILGRN--CRFLQGPETDPATVRKIRAAIDNQTDVTV 548 (998)
Q Consensus 474 l~~i~e~~~--d-~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~--~~~l~~p~~~~~~~~~i~~~l~~g~~~~~ 548 (998)
|+.++..+. | .+++.+++-.|..|+|+|+.||++.||.+.|++.++ +.+.++...+......+++++++.+.-++
T Consensus 16 LENiiRRsn~~dtsFlL~NAQiVD~PiVY~NdgFcKlsGY~RAevMQKs~tc~FMyGEltdk~ti~k~~~t~eN~~~~qf 95 (971)
T KOG0501|consen 16 LENIIRRSNNADTSFLLANAQIVDWPIVYCNDGFCKLSGYHRAEVMQKSCTCSFMYGELTDKGTIEKVRQTLENYETNQF 95 (971)
T ss_pred HHHHHhhccCCCcceeeccceeeccceEEecCcchhccCccHHHHhcccceeeeeeccccchhhHHHHHHHHHhhhhcce
Confidence 556665444 3 455556666688899999999999999999999988 56677778888899999999999999999
Q ss_pred EEEEEecCCcEEEEEEEEeeeccCC----EEEEEEecCCccccccccC
Q 001902 549 QLINYTKSGKKFWNLFHLQPMRDQK----YFIGVQLDGSEHLEPLRNS 592 (998)
Q Consensus 549 e~~~~rkdG~~~wv~~~~spi~d~~----~~vgi~rDITerk~~~~~~ 592 (998)
|+.++.|+.+.+|..+.+.||+++. .|+..++|||.-||+...+
T Consensus 96 EillyKKN~TPvW~~vqiAPIrNe~d~VVLfLctFkDIT~~KQPidde 143 (971)
T KOG0501|consen 96 EILLYKKNRTPVWLLVQIAPIRNEKDKVVLFLCTFKDITALKQPIDDE 143 (971)
T ss_pred eeEeeecCCCceEEEEEeecccCCCceEEEEEeecccchhhcCCCccc
Confidence 9999999999999999999999987 7888999999999975444
No 490
>cd00130 PAS PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in signal transduction.
Probab=98.65 E-value=5.2e-07 Score=77.57 Aligned_cols=99 Identities=25% Similarity=0.399 Sum_probs=83.3
Q ss_pred cCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCcEE
Q 001902 481 IEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKF 560 (998)
Q Consensus 481 ~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~~rkdG~~~ 560 (998)
++++++++|.+|. ++++|+++++++|++.++++|++...+.++.........+...+..+.....+......+|...
T Consensus 1 ~~~~i~~~d~~~~---~~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (103)
T cd00130 1 LPDGVIVLDLDGR---ILYANPAAEQLLGYSPEELIGKSLLDLIHPEDREELRERLENLLSGGEPVTLEVRLRRKDGSVI 77 (103)
T ss_pred CCceEEEECCCCc---EEEECHHHHHHhCCCHHHHcCccHHHhcCCccchHHHHHHHHHHhcCcCeEEEEEEEccCCCEE
Confidence 3678999999777 9999999999999999999999977777777766666667666666666778888888999999
Q ss_pred EEEEEEeeeccCC----EEEEEEecC
Q 001902 561 WNLFHLQPMRDQK----YFIGVQLDG 582 (998)
Q Consensus 561 wv~~~~spi~d~~----~~vgi~rDI 582 (998)
|+.+...++.+.+ +++++++||
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~di 103 (103)
T cd00130 78 WVLVSLTPIRDEGGEVIGLLGVVRDI 103 (103)
T ss_pred EEEEEEEEEecCCCCEEEEEEEEecC
Confidence 9999999988763 788888886
No 491
>PF13596 PAS_10: PAS domain; PDB: 3CAX_A 2QKP_D.
Probab=98.64 E-value=1.3e-07 Score=88.17 Aligned_cols=106 Identities=16% Similarity=0.279 Sum_probs=73.9
Q ss_pred HHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEEEEEEE
Q 001902 191 VKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNY 270 (998)
Q Consensus 191 l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~ 270 (998)
++.++++++.+++++|. +++|.|.|+++.++++.. ...+|+++..+.++...... ..+.+.+..|+....+...
T Consensus 1 L~~il~s~~~~i~~vD~---~~~I~~~n~~a~~~f~~~-~~~iGr~l~~~~~~~~~~~l-~~~i~~~~~~~~~~~~~~~- 74 (106)
T PF13596_consen 1 LNNILDSMPIGIIFVDR---NLRIRYFNPAAARLFNLS-PSDIGRPLFDIHPPLSYPNL-KKIIEQVRSGKEEEFEIVI- 74 (106)
T ss_dssp HHHHHHHSSSEEEEEET---TSBEEEE-SCGC-SS----GGGTTSBCCCSS-HHHHHHH-HHHHHHHHTTSBSEEEEEE-
T ss_pred ChHHHhcCCCCEEEEcC---CCeEEEeChhHhhhcCCC-hHHCCCCHHHcCCccchHHH-HHHHHHHHcCCCceEEEEe-
Confidence 46789999999999999 777999999999999976 45689999988766333333 3444555666653333332
Q ss_pred ecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecch
Q 001902 271 KKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (998)
Q Consensus 271 ~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DIT 304 (998)
..+|. |+.+.+.|+++.+|+..|++.++.|||
T Consensus 75 ~~~~~--~~~~~~~P~~~~~g~~~G~v~~~~DIT 106 (106)
T PF13596_consen 75 PNGGR--WYLVRYRPYRDEDGEYAGAVITFQDIT 106 (106)
T ss_dssp EETTE--EEEEEEEEEE-TTS-EEEEEEEEEE-G
T ss_pred cCCCE--EEEEEEEEEECCCCCEEEEEEEEEecC
Confidence 35554 667899999999999999999999998
No 492
>PRK09902 hypothetical protein; Provisional
Probab=98.64 E-value=4.4e-07 Score=93.73 Aligned_cols=140 Identities=14% Similarity=0.143 Sum_probs=103.7
Q ss_pred CCCCceeEEEEEEccCCeEEEEEEeecccccC---hhHHHHHHHHHHHHHhCCCCC--ccceeEEEee----CCeEEEEE
Q 001902 674 GSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN---RNKVHRACAEREILDMLDHPF--VPALYASFQT----KTHVCLIT 744 (998)
Q Consensus 674 G~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~---~~~~~~~~~E~~il~~l~h~n--Iv~l~~~~~~----~~~~~lV~ 744 (998)
|+||.|.|+.... .|+.|-+|.-....... +.....+.+|...+.+|..-+ ++++...-.. .-..+||+
T Consensus 27 ~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 27 RRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT 104 (216)
T ss_pred CCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence 6799999999876 34468888665221111 335567888999888885332 5555522111 22467999
Q ss_pred ecCCC-CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCc--EEEEeccCcc
Q 001902 745 DYCPG-GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH--VSLTDFDLSC 815 (998)
Q Consensus 745 E~~~g-gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~--vkL~DFG~a~ 815 (998)
|-++| .+|.+++....-...+......++.+++.++.-||+.|+.|+|+.+.|||++.+|. +.++||.-+.
T Consensus 105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 98854 58988886644345678888899999999999999999999999999999987777 9999999764
No 493
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.62 E-value=3.9e-07 Score=100.13 Aligned_cols=238 Identities=19% Similarity=0.253 Sum_probs=157.2
Q ss_pred ccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEE------EeeCC-e
Q 001902 668 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYAS------FQTKT-H 739 (998)
Q Consensus 668 ~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~------~~~~~-~ 739 (998)
...+.||+|+.+.+|..... .-.+-|++.+..... + ......|... .||-+..-+.| .-+.. .
T Consensus 14 ~~gr~LgqGgea~ly~l~e~---~d~VAKIYh~Pppa~-----~-aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~ 84 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEV---RDQVAKIYHAPPPAA-----Q-AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKV 84 (637)
T ss_pred CCCccccCCccceeeecchh---hchhheeecCCCchH-----H-HHHHHHhccCCCCcchhhhhcccHHHhhCCCccce
Confidence 34578999999999987653 346678877532111 1 1122333333 56654331111 11222 3
Q ss_pred EEEEEecCCCCc-hhHHHh----hCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCc
Q 001902 740 VCLITDYCPGGE-LFLLLD----RQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 814 (998)
Q Consensus 740 ~~lV~E~~~ggs-L~~~l~----~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a 814 (998)
+.++|..+.|.. +..++. ++......+..+..+++.|+.+.+.||..|.+-+|+.++|||+..++.|.|+|-...
T Consensus 85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsf 164 (637)
T COG4248 85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSF 164 (637)
T ss_pred eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccce
Confidence 778999987652 333332 355667888999999999999999999999999999999999999999999987643
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhc-----CCCCCChhHHHHHHHHHHHHHc
Q 001902 815 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLY 889 (998)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~~sDIwSlG~il~eLlt 889 (998)
.. ........+.+|.+.|.+||... +..-+...|.|.||+++++|+.
T Consensus 165 qi----------------------------~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ 216 (637)
T COG4248 165 QI----------------------------NANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLF 216 (637)
T ss_pred ee----------------------------ccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHh
Confidence 21 11223345678999999999865 3344568999999999999997
Q ss_pred C-CCCCCCCChH----HHHH-HHHhCC-----------CCCCCC---CCCcHHHHHHHHHcccc--CccCcCCCh
Q 001902 890 G-YTPFRGKTRQ----KTFA-NILHKD-----------LKFPSS---TPTSLHAKQLMYRLLHR--DPKSRLGSH 942 (998)
Q Consensus 890 G-~~Pf~~~~~~----~~~~-~i~~~~-----------~~~~~~---~~~s~~l~~Ll~~~L~~--dP~~Rpt~~ 942 (998)
| +.||.+.... .-++ .|..+. .+.|.. .-+++.++.|..+|+.. ++.-|||.+
T Consensus 217 ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~ 291 (637)
T COG4248 217 GGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAK 291 (637)
T ss_pred cCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHH
Confidence 5 9999763211 1111 222221 112222 23567888999999874 355799965
No 494
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.60 E-value=8.2e-08 Score=112.75 Aligned_cols=189 Identities=21% Similarity=0.233 Sum_probs=113.5
Q ss_pred CCchhhhccCCcccCCCCCCCCCCchhhHHhhhccccccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccc
Q 001902 624 LTPEDLWANHSKVVHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM 703 (998)
Q Consensus 624 l~p~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~ 703 (998)
+-|..+...-+++....|+........-+.+-+.....-....|.. ..|+.++-|+||+|+.. +|+.||||+.+++..
T Consensus 85 l~p~e~~~eL~~LQD~vpp~~~~~~~~iie~eLG~~iee~F~eF~~-~PiAsASIaQVH~A~L~-sG~~VAVKVqrPgi~ 162 (517)
T COG0661 85 LVPPEYAEELAKLQDRVPPFPFEEAERIIEEELGRPIEELFSEFEP-EPIASASIAQVHRAVLK-SGEEVAVKVQRPGIR 162 (517)
T ss_pred ccCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCCHHHHHHHcCC-CchhhhhHhhheeEEec-CCCEEEEEecCCChH
Confidence 4677777777777777765533222222222222111111223333 67999999999999984 599999999876422
Q ss_pred cCh---------------------------hH----HH------HHHHHHHHHHhC-----CCCCccceeEEEeeCCeEE
Q 001902 704 LNR---------------------------NK----VH------RACAEREILDML-----DHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 704 ~~~---------------------------~~----~~------~~~~E~~il~~l-----~h~nIv~l~~~~~~~~~~~ 741 (998)
..- .. .+ ++..|..-+.++ +.++|.-..=+....+.-+
T Consensus 163 ~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~V 242 (517)
T COG0661 163 ERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRV 242 (517)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcE
Confidence 110 00 01 112344444443 2444433332334445668
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHH-HHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVA-LEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~a-L~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 818 (998)
|+|||++|..+.+...... ...+ .+.++..++.+ +..+-..|+.|.|.+|.||+++.+|.+.+.|||+....+
T Consensus 243 LtmE~i~Gi~i~d~~~l~~-~g~d---~k~ia~~~~~~f~~q~~~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~ 316 (517)
T COG0661 243 LTMEWIDGIKISDIAALKS-AGID---RKELAELLVRAFLRQLLRDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLD 316 (517)
T ss_pred EEEEeeCCEecccHHHHHh-cCCC---HHHHHHHHHHHHHHHHHhcCccccCCCccceEEecCCcEEEEcCcceecCC
Confidence 9999999999988843221 1234 23333333333 344445899999999999999999999999999985543
No 495
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.60 E-value=5.6e-07 Score=94.64 Aligned_cols=126 Identities=25% Similarity=0.259 Sum_probs=92.2
Q ss_pred CCeEEEEEEeecccccC----hhHHHHHHHHHHHHHhCCCC--CccceeEEEeeC----CeEEEEEecCCCC-chhHHHh
Q 001902 689 SGQYFAMKAMDKGVMLN----RNKVHRACAEREILDMLDHP--FVPALYASFQTK----THVCLITDYCPGG-ELFLLLD 757 (998)
Q Consensus 689 ~~~~valK~i~~~~~~~----~~~~~~~~~E~~il~~l~h~--nIv~l~~~~~~~----~~~~lV~E~~~gg-sL~~~l~ 757 (998)
.++.|-+|........+ .-......+|...+..|..- .++.++.+.... ...+||+|++++. +|.+++.
T Consensus 31 ~~~~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~ 110 (206)
T PF06293_consen 31 VGRRYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQ 110 (206)
T ss_pred cceEEEECCeechhccchhhhcccchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHH
Confidence 45666666543221111 12234567788887777433 345666666542 2458999999885 7999987
Q ss_pred hCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCC---cEEEEeccCccc
Q 001902 758 RQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLTDFDLSCL 816 (998)
Q Consensus 758 ~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g---~vkL~DFG~a~~ 816 (998)
.... ++......++.+++..++-||.+||+|+|++|.|||++.++ .+.|+||+-+..
T Consensus 111 ~~~~--~~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 111 QWEQ--LDPSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred hhcc--cchhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 6422 66777889999999999999999999999999999999887 899999998744
No 496
>KOG0501 consensus K+-channel KCNQ [Inorganic ion transport and metabolism]
Probab=98.59 E-value=1.6e-07 Score=105.29 Aligned_cols=109 Identities=35% Similarity=0.683 Sum_probs=98.5
Q ss_pred cEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCC--cccCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCCEEE
Q 001902 201 TFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCR--FLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFW 278 (998)
Q Consensus 201 ~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~--~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~w 278 (998)
.+++-++.-.|..|+|+|..||++.||.+.|+.-+++. +++.+..+....+.+++.+...+.-.+|+..++|+...+|
T Consensus 29 sFlL~NAQiVD~PiVY~NdgFcKlsGY~RAevMQKs~tc~FMyGEltdk~ti~k~~~t~eN~~~~qfEillyKKN~TPvW 108 (971)
T KOG0501|consen 29 SFLLANAQIVDWPIVYCNDGFCKLSGYHRAEVMQKSCTCSFMYGELTDKGTIEKVRQTLENYETNQFEILLYKKNRTPVW 108 (971)
T ss_pred ceeeccceeeccceEEecCcchhccCccHHHHhcccceeeeeeccccchhhHHHHHHHHHhhhhcceeeEeeecCCCceE
Confidence 44555555558899999999999999999999998865 7788888899999999999999998999999999999999
Q ss_pred EEeeeeEEeCCCCCEEEEEEEEecchhhhHH
Q 001902 279 NLLTIAPIKDDEGKVLKFIGMQVEVSKHTEG 309 (998)
Q Consensus 279 ~~~~~spi~d~~G~v~~~v~i~~DITerk~~ 309 (998)
+.+.+.||+++...++-|++.++|||..|+-
T Consensus 109 ~~vqiAPIrNe~d~VVLfLctFkDIT~~KQP 139 (971)
T KOG0501|consen 109 LLVQIAPIRNEKDKVVLFLCTFKDITALKQP 139 (971)
T ss_pred EEEEeecccCCCceEEEEEeecccchhhcCC
Confidence 9999999999999999999999999999874
No 497
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.57 E-value=8e-07 Score=92.09 Aligned_cols=142 Identities=21% Similarity=0.266 Sum_probs=95.2
Q ss_pred cccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHH------HHHHHHHHHHhC---CCCCccce
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVH------RACAEREILDML---DHPFVPAL 730 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~------~~~~E~~il~~l---~h~nIv~l 730 (998)
..+....|++++.+-......|.+..- +|+.+++|..+....-...... ...+.+..+.++ .......+
T Consensus 26 ~~i~~~~~~~~kv~k~~~r~~ValIei--~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~ 103 (229)
T PF06176_consen 26 EKILDNNYKIIKVFKNTKRNYVALIEI--DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADP 103 (229)
T ss_pred HHHHhCCceEEEeecCCCccEEEEEEE--CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccc
Confidence 345567899999999999999988876 6789999988754211111111 112233333333 22333333
Q ss_pred eEEEe-----eCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCc
Q 001902 731 YASFQ-----TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 805 (998)
Q Consensus 731 ~~~~~-----~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~ 805 (998)
+-+.. .....+|||||++|..|.++.. +++ .+...|.+++.-||+.|+.|+|.+|+|++++.+ .
T Consensus 104 yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~-~ 172 (229)
T PF06176_consen 104 YLAAEKKIFRYTSSYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNN-G 172 (229)
T ss_pred eeeeeeeeccceeEEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEECC-c
Confidence 33322 2245678999999988877642 222 244567788999999999999999999999954 5
Q ss_pred EEEEeccCc
Q 001902 806 VSLTDFDLS 814 (998)
Q Consensus 806 vkL~DFG~a 814 (998)
++++||+..
T Consensus 173 i~iID~~~k 181 (229)
T PF06176_consen 173 IRIIDTQGK 181 (229)
T ss_pred EEEEECccc
Confidence 999999865
No 498
>PF12860 PAS_7: PAS fold
Probab=98.56 E-value=2.2e-07 Score=87.90 Aligned_cols=105 Identities=20% Similarity=0.275 Sum_probs=74.7
Q ss_pred HHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhh-cCCCCCccc---------CCCCChHHHHHHHHHHHcCCcEE
Q 001902 195 LSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEV-VGRNCRFLQ---------GAGTDPEDVAKIRETLQNGQSYC 264 (998)
Q Consensus 195 ld~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEl-iG~~~~~l~---------~~~~~~~~~~~i~~~l~~g~~~~ 264 (998)
|+++++||++.|. +|+++++|++|.+++|++.+.+ .|.++..+. .+.....................
T Consensus 1 Ld~l~~Gv~v~D~---~~rl~~~N~~~~~l~~~~~~~~~~G~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (115)
T PF12860_consen 1 LDSLPQGVAVFDS---DGRLVFWNQRFRELFGLPPEMLRPGASFRDLLRRLAERGEFPPGDPEAWVRQRLARLRRRQPRS 77 (115)
T ss_pred CCCcCceEEEEcC---CCeEEeEcHHHHHHhCCCHHHhcCCCCHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhcCCCce
Confidence 4789999999999 7889999999999999999998 788865332 11222223333333334444333
Q ss_pred EEEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHH
Q 001902 265 GRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAK 311 (998)
Q Consensus 265 ~e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~ 311 (998)
.+ ....||. |++++..|+ ++| |+|.++.|||+++++|+
T Consensus 78 ~~--~~~~dgr--~l~~~~~~~--~~G---g~v~~~~DVT~~~~~E~ 115 (115)
T PF12860_consen 78 FE--LRLPDGR--WLEVRAQPL--PDG---GFVLTFTDVTERRRAEE 115 (115)
T ss_pred eE--EECCCCE--EEEEEeEEC--CCC---CEEEEEEeCCHHHHhcC
Confidence 33 3468886 677888888 445 67789999999999874
No 499
>PRK11388 DNA-binding transcriptional regulator DhaR; Provisional
Probab=98.55 E-value=3.2e-06 Score=104.34 Aligned_cols=103 Identities=16% Similarity=0.182 Sum_probs=76.5
Q ss_pred HHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001902 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~~ 553 (998)
+..+++++.+||+++|.+|+ |+++|+++++++|++.++++|++...+.+.. ..+...+..+..+.......
T Consensus 205 ~~~il~~~~~gVl~vD~~G~---I~~~N~aa~~llg~s~~~l~G~~i~~l~~~~------~~l~~vl~~~~~~~~~~~~l 275 (638)
T PRK11388 205 LNALLESMDDGVIAWDEQGN---LQFLNAQAARLLRLDATASQGRAITELLTLP------AVLQQAIKQAHPLKHVEVTF 275 (638)
T ss_pred HHHHHhccCCcEEEECCCCe---EehhhHHHHHHhCcCHHHHCCCcHHHHhccc------hHHHHHHhcCCceeeEEEEE
Confidence 46689999999999999888 9999999999999999999999977665321 12344556665544333334
Q ss_pred ecCCcEEEEEEEEeeeccCC--EEEEEEecCCcc
Q 001902 554 TKSGKKFWNLFHLQPMRDQK--YFIGVQLDGSEH 585 (998)
Q Consensus 554 rkdG~~~wv~~~~spi~d~~--~~vgi~rDITer 585 (998)
..+|..+++.+++.|+.+.. +++.+.+|++..
T Consensus 276 ~~~g~~~~~~v~~~Pi~~~~g~~~v~~l~~~~~~ 309 (638)
T PRK11388 276 ESQGQFIDAVITLKPIIEGQGTSFILLLHPVEQM 309 (638)
T ss_pred ecCCceEEEEEEEEeecccCceEEEEEehhhHHH
Confidence 55788888999999997543 566666776554
No 500
>PRK11360 sensory histidine kinase AtoS; Provisional
Probab=98.53 E-value=5e-07 Score=110.59 Aligned_cols=109 Identities=15% Similarity=0.107 Sum_probs=88.6
Q ss_pred HHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCc-EEEEEEE
Q 001902 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD-VTVQLIN 552 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~-~~~e~~~ 552 (998)
++.++++++++++++|.+|. |+++|+++++++||+.++++|++...+.++.. .....+...+..+.. ...+...
T Consensus 264 ~~~i~~~~~~~i~~~d~~g~---i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 338 (607)
T PRK11360 264 NELILESIADGVIAIDRQGK---ITTMNPAAEVITGLQRHELVGKPYSELFPPNT--PFASPLLDTLEHGTEHVDLEISF 338 (607)
T ss_pred HHHHHHhccCeEEEEcCCCC---EEEECHHHHHHhCCChHHhcCCcHHHHcCCch--hHHHHHHHHHhcCCCccceEEEE
Confidence 67899999999999999777 99999999999999999999999877776542 233445555555544 4456677
Q ss_pred EecCCcEEEEEEEEeeeccCC----EEEEEEecCCccccc
Q 001902 553 YTKSGKKFWNLFHLQPMRDQK----YFIGVQLDGSEHLEP 588 (998)
Q Consensus 553 ~rkdG~~~wv~~~~spi~d~~----~~vgi~rDITerk~~ 588 (998)
.+++|..+ +.++.+|+.+.+ +++++++|||++|+.
T Consensus 339 ~~~~~~~~-~~~~~~~i~~~~g~~~~~i~~~~Dite~~~~ 377 (607)
T PRK11360 339 PGRDRTIE-LSVSTSLLHNTHGEMIGALVIFSDLTERKRL 377 (607)
T ss_pred EcCCCcEE-EEEEEeeEEcCCCCEEEEEEEEeechHHHHH
Confidence 88888877 889999999765 889999999999963
Done!